Multiple sequence alignment - TraesCS7D01G088000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G088000 chr7D 100.000 2800 0 0 1 2800 53576596 53579395 0.000000e+00 5171.0
1 TraesCS7D01G088000 chr7D 91.379 522 35 4 2152 2663 526547090 526547611 0.000000e+00 706.0
2 TraesCS7D01G088000 chr7D 83.240 716 44 24 1190 1870 53705013 53705687 3.110000e-164 588.0
3 TraesCS7D01G088000 chr7D 82.209 652 61 40 1010 1626 53529758 53530389 6.920000e-141 510.0
4 TraesCS7D01G088000 chr7D 92.635 353 17 4 1271 1618 53558511 53558859 1.500000e-137 499.0
5 TraesCS7D01G088000 chr7D 89.706 340 24 5 102 441 53701855 53702183 9.270000e-115 424.0
6 TraesCS7D01G088000 chr7D 82.724 301 22 17 918 1203 53703318 53703603 1.000000e-59 241.0
7 TraesCS7D01G088000 chr7A 83.402 1205 111 34 447 1627 56430227 56431366 0.000000e+00 1035.0
8 TraesCS7D01G088000 chr7A 82.541 968 92 43 925 1870 56657945 56658857 0.000000e+00 780.0
9 TraesCS7D01G088000 chr7A 86.134 613 36 25 1244 1828 56738817 56739408 1.430000e-172 616.0
10 TraesCS7D01G088000 chr7A 85.390 616 43 22 838 1435 56982120 56982706 1.860000e-166 595.0
11 TraesCS7D01G088000 chr7A 82.388 670 56 29 588 1243 56738140 56738761 6.870000e-146 527.0
12 TraesCS7D01G088000 chr7A 86.885 427 35 4 1210 1624 56421836 56422253 2.540000e-125 459.0
13 TraesCS7D01G088000 chr7A 80.190 631 73 33 1018 1631 55918335 55918930 2.580000e-115 425.0
14 TraesCS7D01G088000 chr7A 79.435 637 81 37 1010 1612 56235429 56236049 3.360000e-109 405.0
15 TraesCS7D01G088000 chr7A 81.328 482 52 28 885 1351 55922612 55923070 9.540000e-95 357.0
16 TraesCS7D01G088000 chr7A 88.235 221 24 2 221 441 56711351 56711569 2.140000e-66 263.0
17 TraesCS7D01G088000 chr7A 87.783 221 26 1 221 441 56656514 56656733 9.950000e-65 257.0
18 TraesCS7D01G088000 chr7A 78.935 432 45 27 448 870 56657533 56657927 4.630000e-63 252.0
19 TraesCS7D01G088000 chr7A 81.364 220 24 11 443 659 56712353 56712558 2.230000e-36 163.0
20 TraesCS7D01G088000 chr7A 89.908 109 11 0 632 740 56238692 56238800 1.050000e-29 141.0
21 TraesCS7D01G088000 chr4A 87.534 746 48 19 888 1619 668323406 668324120 0.000000e+00 821.0
22 TraesCS7D01G088000 chr4A 85.795 704 58 19 939 1631 668305991 668306663 0.000000e+00 708.0
23 TraesCS7D01G088000 chr4A 83.995 756 57 30 887 1618 668287833 668288548 0.000000e+00 667.0
24 TraesCS7D01G088000 chr4A 89.086 394 31 6 1227 1619 668337093 668337475 1.950000e-131 479.0
25 TraesCS7D01G088000 chr4A 86.061 330 32 9 103 431 668322357 668322673 2.670000e-90 342.0
26 TraesCS7D01G088000 chr4A 88.000 175 9 6 1699 1869 668324277 668324443 2.200000e-46 196.0
27 TraesCS7D01G088000 chr4A 86.022 186 16 4 567 752 668323153 668323328 1.020000e-44 191.0
28 TraesCS7D01G088000 chr4A 81.287 171 14 9 1699 1859 668359465 668359627 3.790000e-24 122.0
29 TraesCS7D01G088000 chr4A 86.207 87 4 4 1701 1786 668337641 668337720 1.380000e-13 87.9
30 TraesCS7D01G088000 chr5D 92.706 521 27 7 2152 2663 103702244 103701726 0.000000e+00 741.0
31 TraesCS7D01G088000 chr5D 91.860 516 34 4 2152 2660 223941409 223941923 0.000000e+00 713.0
32 TraesCS7D01G088000 chr5D 91.860 516 34 4 2152 2660 241936142 241935628 0.000000e+00 713.0
33 TraesCS7D01G088000 chr3D 92.955 511 28 4 2150 2653 525024177 525024686 0.000000e+00 737.0
34 TraesCS7D01G088000 chr3D 92.248 516 32 4 2152 2660 546170029 546170543 0.000000e+00 725.0
35 TraesCS7D01G088000 chr3D 91.845 515 35 5 2152 2660 465894767 465895280 0.000000e+00 712.0
36 TraesCS7D01G088000 chr6D 92.054 516 34 3 2152 2660 400101414 400101929 0.000000e+00 719.0
37 TraesCS7D01G088000 chr2D 91.731 520 36 5 2151 2663 460286609 460286090 0.000000e+00 715.0
38 TraesCS7D01G088000 chr1A 88.750 160 14 1 2001 2156 528073285 528073444 2.850000e-45 193.0
39 TraesCS7D01G088000 chr2B 86.400 125 13 1 2042 2162 744111639 744111515 1.750000e-27 134.0
40 TraesCS7D01G088000 chr3A 84.286 140 14 4 2661 2800 144547280 144547411 2.260000e-26 130.0
41 TraesCS7D01G088000 chr1B 93.939 66 4 0 1 66 619633727 619633792 1.770000e-17 100.0
42 TraesCS7D01G088000 chr1B 85.542 83 9 2 2076 2156 657498558 657498477 1.790000e-12 84.2
43 TraesCS7D01G088000 chr1D 76.667 150 27 7 2010 2156 473021134 473020990 2.990000e-10 76.8
44 TraesCS7D01G088000 chr5B 100.000 32 0 0 471 502 610082866 610082835 3.010000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G088000 chr7D 53576596 53579395 2799 False 5171.000000 5171 100.000000 1 2800 1 chr7D.!!$F3 2799
1 TraesCS7D01G088000 chr7D 526547090 526547611 521 False 706.000000 706 91.379000 2152 2663 1 chr7D.!!$F4 511
2 TraesCS7D01G088000 chr7D 53529758 53530389 631 False 510.000000 510 82.209000 1010 1626 1 chr7D.!!$F1 616
3 TraesCS7D01G088000 chr7D 53701855 53705687 3832 False 417.666667 588 85.223333 102 1870 3 chr7D.!!$F5 1768
4 TraesCS7D01G088000 chr7A 56430227 56431366 1139 False 1035.000000 1035 83.402000 447 1627 1 chr7A.!!$F2 1180
5 TraesCS7D01G088000 chr7A 56982120 56982706 586 False 595.000000 595 85.390000 838 1435 1 chr7A.!!$F3 597
6 TraesCS7D01G088000 chr7A 56738140 56739408 1268 False 571.500000 616 84.261000 588 1828 2 chr7A.!!$F8 1240
7 TraesCS7D01G088000 chr7A 56656514 56658857 2343 False 429.666667 780 83.086333 221 1870 3 chr7A.!!$F6 1649
8 TraesCS7D01G088000 chr7A 55918335 55923070 4735 False 391.000000 425 80.759000 885 1631 2 chr7A.!!$F4 746
9 TraesCS7D01G088000 chr7A 56235429 56238800 3371 False 273.000000 405 84.671500 632 1612 2 chr7A.!!$F5 980
10 TraesCS7D01G088000 chr7A 56711351 56712558 1207 False 213.000000 263 84.799500 221 659 2 chr7A.!!$F7 438
11 TraesCS7D01G088000 chr4A 668305991 668306663 672 False 708.000000 708 85.795000 939 1631 1 chr4A.!!$F2 692
12 TraesCS7D01G088000 chr4A 668287833 668288548 715 False 667.000000 667 83.995000 887 1618 1 chr4A.!!$F1 731
13 TraesCS7D01G088000 chr4A 668322357 668324443 2086 False 387.500000 821 86.904250 103 1869 4 chr4A.!!$F4 1766
14 TraesCS7D01G088000 chr4A 668337093 668337720 627 False 283.450000 479 87.646500 1227 1786 2 chr4A.!!$F5 559
15 TraesCS7D01G088000 chr5D 103701726 103702244 518 True 741.000000 741 92.706000 2152 2663 1 chr5D.!!$R1 511
16 TraesCS7D01G088000 chr5D 223941409 223941923 514 False 713.000000 713 91.860000 2152 2660 1 chr5D.!!$F1 508
17 TraesCS7D01G088000 chr5D 241935628 241936142 514 True 713.000000 713 91.860000 2152 2660 1 chr5D.!!$R2 508
18 TraesCS7D01G088000 chr3D 525024177 525024686 509 False 737.000000 737 92.955000 2150 2653 1 chr3D.!!$F2 503
19 TraesCS7D01G088000 chr3D 546170029 546170543 514 False 725.000000 725 92.248000 2152 2660 1 chr3D.!!$F3 508
20 TraesCS7D01G088000 chr3D 465894767 465895280 513 False 712.000000 712 91.845000 2152 2660 1 chr3D.!!$F1 508
21 TraesCS7D01G088000 chr6D 400101414 400101929 515 False 719.000000 719 92.054000 2152 2660 1 chr6D.!!$F1 508
22 TraesCS7D01G088000 chr2D 460286090 460286609 519 True 715.000000 715 91.731000 2151 2663 1 chr2D.!!$R1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
35 36 0.108138 GGACACTCCGTGAATCCCTG 60.108 60.0 0.38 0.0 36.96 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1962 5429 0.179034 GAGGTCAGGTGGCATGATCC 60.179 60.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.130286 CAGAAGATCCCAACTAGGACAC 57.870 50.000 0.00 0.00 39.24 3.67
22 23 3.772025 CAGAAGATCCCAACTAGGACACT 59.228 47.826 0.00 0.00 39.24 3.55
23 24 4.027437 AGAAGATCCCAACTAGGACACTC 58.973 47.826 0.00 0.00 39.24 3.51
24 25 2.753247 AGATCCCAACTAGGACACTCC 58.247 52.381 0.00 0.00 39.24 3.85
25 26 1.409427 GATCCCAACTAGGACACTCCG 59.591 57.143 0.00 0.00 42.75 4.63
26 27 0.113776 TCCCAACTAGGACACTCCGT 59.886 55.000 0.00 0.00 42.75 4.69
27 28 0.246635 CCCAACTAGGACACTCCGTG 59.753 60.000 0.00 0.00 42.75 4.94
28 29 1.254026 CCAACTAGGACACTCCGTGA 58.746 55.000 0.38 0.00 42.75 4.35
29 30 1.616865 CCAACTAGGACACTCCGTGAA 59.383 52.381 0.38 0.00 42.75 3.18
30 31 2.233922 CCAACTAGGACACTCCGTGAAT 59.766 50.000 0.38 0.00 42.75 2.57
31 32 3.512680 CAACTAGGACACTCCGTGAATC 58.487 50.000 0.38 0.00 42.75 2.52
32 33 2.100989 ACTAGGACACTCCGTGAATCC 58.899 52.381 0.38 0.00 42.75 3.01
33 34 1.409427 CTAGGACACTCCGTGAATCCC 59.591 57.143 0.38 0.00 42.75 3.85
34 35 0.252284 AGGACACTCCGTGAATCCCT 60.252 55.000 0.38 0.00 42.75 4.20
35 36 0.108138 GGACACTCCGTGAATCCCTG 60.108 60.000 0.38 0.00 36.96 4.45
36 37 0.608640 GACACTCCGTGAATCCCTGT 59.391 55.000 0.38 0.00 36.96 4.00
37 38 1.822990 GACACTCCGTGAATCCCTGTA 59.177 52.381 0.38 0.00 36.96 2.74
38 39 2.232941 GACACTCCGTGAATCCCTGTAA 59.767 50.000 0.38 0.00 36.96 2.41
39 40 2.635915 ACACTCCGTGAATCCCTGTAAA 59.364 45.455 0.38 0.00 36.96 2.01
40 41 3.071892 ACACTCCGTGAATCCCTGTAAAA 59.928 43.478 0.38 0.00 36.96 1.52
41 42 3.435671 CACTCCGTGAATCCCTGTAAAAC 59.564 47.826 0.00 0.00 35.23 2.43
42 43 3.071892 ACTCCGTGAATCCCTGTAAAACA 59.928 43.478 0.00 0.00 0.00 2.83
43 44 4.261801 CTCCGTGAATCCCTGTAAAACAT 58.738 43.478 0.00 0.00 0.00 2.71
44 45 5.046159 ACTCCGTGAATCCCTGTAAAACATA 60.046 40.000 0.00 0.00 0.00 2.29
45 46 5.424757 TCCGTGAATCCCTGTAAAACATAG 58.575 41.667 0.00 0.00 0.00 2.23
46 47 4.035208 CCGTGAATCCCTGTAAAACATAGC 59.965 45.833 0.00 0.00 0.00 2.97
47 48 4.035208 CGTGAATCCCTGTAAAACATAGCC 59.965 45.833 0.00 0.00 0.00 3.93
48 49 4.338400 GTGAATCCCTGTAAAACATAGCCC 59.662 45.833 0.00 0.00 0.00 5.19
49 50 2.702592 TCCCTGTAAAACATAGCCCG 57.297 50.000 0.00 0.00 0.00 6.13
50 51 1.910671 TCCCTGTAAAACATAGCCCGT 59.089 47.619 0.00 0.00 0.00 5.28
51 52 2.014128 CCCTGTAAAACATAGCCCGTG 58.986 52.381 0.00 0.00 0.00 4.94
52 53 2.617021 CCCTGTAAAACATAGCCCGTGT 60.617 50.000 0.00 0.00 0.00 4.49
53 54 2.418628 CCTGTAAAACATAGCCCGTGTG 59.581 50.000 0.00 0.00 0.00 3.82
54 55 3.071479 CTGTAAAACATAGCCCGTGTGT 58.929 45.455 0.00 0.00 30.33 3.72
55 56 2.809119 TGTAAAACATAGCCCGTGTGTG 59.191 45.455 0.00 0.00 29.45 3.82
56 57 1.975660 AAAACATAGCCCGTGTGTGT 58.024 45.000 0.00 0.00 29.45 3.72
57 58 2.843401 AAACATAGCCCGTGTGTGTA 57.157 45.000 0.00 0.00 29.45 2.90
58 59 2.380084 AACATAGCCCGTGTGTGTAG 57.620 50.000 0.00 0.00 29.45 2.74
59 60 0.108329 ACATAGCCCGTGTGTGTAGC 60.108 55.000 0.00 0.00 0.00 3.58
60 61 0.108377 CATAGCCCGTGTGTGTAGCA 60.108 55.000 0.00 0.00 0.00 3.49
61 62 0.830648 ATAGCCCGTGTGTGTAGCAT 59.169 50.000 0.00 0.00 0.00 3.79
62 63 0.611200 TAGCCCGTGTGTGTAGCATT 59.389 50.000 0.00 0.00 0.00 3.56
63 64 0.955428 AGCCCGTGTGTGTAGCATTG 60.955 55.000 0.00 0.00 0.00 2.82
64 65 1.501741 CCCGTGTGTGTAGCATTGC 59.498 57.895 0.00 0.00 0.00 3.56
65 66 0.955428 CCCGTGTGTGTAGCATTGCT 60.955 55.000 16.63 16.63 43.41 3.91
66 67 0.443869 CCGTGTGTGTAGCATTGCTC 59.556 55.000 15.81 7.72 40.44 4.26
67 68 1.432514 CGTGTGTGTAGCATTGCTCT 58.567 50.000 15.81 0.00 40.44 4.09
68 69 1.800586 CGTGTGTGTAGCATTGCTCTT 59.199 47.619 15.81 0.00 40.44 2.85
69 70 2.224079 CGTGTGTGTAGCATTGCTCTTT 59.776 45.455 15.81 0.00 40.44 2.52
70 71 3.303990 CGTGTGTGTAGCATTGCTCTTTT 60.304 43.478 15.81 0.00 40.44 2.27
71 72 4.610945 GTGTGTGTAGCATTGCTCTTTTT 58.389 39.130 15.81 0.00 40.44 1.94
97 98 9.707957 TTTATAGGAAAGGCTGAAATAAATCCA 57.292 29.630 0.00 0.00 0.00 3.41
98 99 7.830099 ATAGGAAAGGCTGAAATAAATCCAG 57.170 36.000 0.00 0.00 0.00 3.86
99 100 4.958581 AGGAAAGGCTGAAATAAATCCAGG 59.041 41.667 0.00 0.00 0.00 4.45
100 101 4.956075 GGAAAGGCTGAAATAAATCCAGGA 59.044 41.667 0.00 0.00 0.00 3.86
101 102 5.600069 GGAAAGGCTGAAATAAATCCAGGAT 59.400 40.000 0.00 0.00 0.00 3.24
105 106 5.832060 AGGCTGAAATAAATCCAGGATCAAG 59.168 40.000 1.11 0.00 0.00 3.02
199 200 6.465439 TTCTGCCTCTTCATCTTAACGATA 57.535 37.500 0.00 0.00 0.00 2.92
207 208 7.492669 CCTCTTCATCTTAACGATACACACATT 59.507 37.037 0.00 0.00 0.00 2.71
433 434 7.027874 AGTAACAAAATAATGACAGGAGGGA 57.972 36.000 0.00 0.00 0.00 4.20
441 442 0.534203 TGACAGGAGGGACGTTTTGC 60.534 55.000 0.00 0.00 0.00 3.68
473 541 7.523293 TTATGTGTGAAGATTGATGTTGGTT 57.477 32.000 0.00 0.00 0.00 3.67
474 542 8.628630 TTATGTGTGAAGATTGATGTTGGTTA 57.371 30.769 0.00 0.00 0.00 2.85
475 543 7.707624 ATGTGTGAAGATTGATGTTGGTTAT 57.292 32.000 0.00 0.00 0.00 1.89
477 545 6.489700 TGTGTGAAGATTGATGTTGGTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
478 546 6.803320 GTGTGAAGATTGATGTTGGTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
479 547 5.801947 GTGAAGATTGATGTTGGTTATGTGC 59.198 40.000 0.00 0.00 0.00 4.57
480 548 5.476254 TGAAGATTGATGTTGGTTATGTGCA 59.524 36.000 0.00 0.00 0.00 4.57
482 550 6.140303 AGATTGATGTTGGTTATGTGCATC 57.860 37.500 0.00 0.00 37.17 3.91
484 552 5.981088 TTGATGTTGGTTATGTGCATCTT 57.019 34.783 0.00 0.00 37.44 2.40
485 553 7.557358 AGATTGATGTTGGTTATGTGCATCTTA 59.443 33.333 0.00 0.00 37.44 2.10
486 554 7.459795 TTGATGTTGGTTATGTGCATCTTAA 57.540 32.000 0.00 0.00 37.44 1.85
487 555 6.851609 TGATGTTGGTTATGTGCATCTTAAC 58.148 36.000 0.00 3.40 37.44 2.01
488 556 6.658816 TGATGTTGGTTATGTGCATCTTAACT 59.341 34.615 16.78 5.22 37.44 2.24
490 558 8.752005 ATGTTGGTTATGTGCATCTTAACTAT 57.248 30.769 16.78 9.33 37.07 2.12
491 559 7.984391 TGTTGGTTATGTGCATCTTAACTATG 58.016 34.615 16.78 0.00 37.07 2.23
500 568 4.077300 CATCTTAACTATGCAGAGGCCA 57.923 45.455 13.85 0.00 40.13 5.36
501 569 3.827008 TCTTAACTATGCAGAGGCCAG 57.173 47.619 13.85 5.04 40.13 4.85
502 570 3.374764 TCTTAACTATGCAGAGGCCAGA 58.625 45.455 13.85 7.35 40.13 3.86
503 571 3.969976 TCTTAACTATGCAGAGGCCAGAT 59.030 43.478 13.85 0.00 40.13 2.90
506 1341 6.954102 TCTTAACTATGCAGAGGCCAGATATA 59.046 38.462 13.85 0.00 40.13 0.86
509 1344 5.028802 ACTATGCAGAGGCCAGATATATGT 58.971 41.667 13.85 0.00 40.13 2.29
517 1352 8.025445 GCAGAGGCCAGATATATGTTTATTTTG 58.975 37.037 5.01 0.00 0.00 2.44
519 1354 9.289782 AGAGGCCAGATATATGTTTATTTTGAC 57.710 33.333 5.01 0.00 0.00 3.18
689 1533 0.317770 CCACACACATCGCCAACAAC 60.318 55.000 0.00 0.00 0.00 3.32
690 1534 0.317770 CACACACATCGCCAACAACC 60.318 55.000 0.00 0.00 0.00 3.77
693 1537 0.179032 ACACATCGCCAACAACCTGA 60.179 50.000 0.00 0.00 0.00 3.86
696 1540 0.523072 CATCGCCAACAACCTGAAGG 59.477 55.000 0.00 0.00 42.17 3.46
736 1588 0.807667 CTCACGCACATGCTCCTACC 60.808 60.000 1.82 0.00 39.32 3.18
737 1589 1.219124 CACGCACATGCTCCTACCT 59.781 57.895 1.82 0.00 39.32 3.08
738 1590 0.459899 CACGCACATGCTCCTACCTA 59.540 55.000 1.82 0.00 39.32 3.08
739 1591 0.460311 ACGCACATGCTCCTACCTAC 59.540 55.000 1.82 0.00 39.32 3.18
740 1592 0.595053 CGCACATGCTCCTACCTACG 60.595 60.000 1.82 0.00 39.32 3.51
741 1593 0.460311 GCACATGCTCCTACCTACGT 59.540 55.000 0.00 0.00 38.21 3.57
742 1594 1.802880 GCACATGCTCCTACCTACGTG 60.803 57.143 0.00 0.00 38.21 4.49
743 1595 1.476891 CACATGCTCCTACCTACGTGT 59.523 52.381 0.00 0.00 32.63 4.49
744 1596 2.094182 CACATGCTCCTACCTACGTGTT 60.094 50.000 0.00 0.00 30.05 3.32
745 1597 3.129813 CACATGCTCCTACCTACGTGTTA 59.870 47.826 0.00 0.00 30.05 2.41
746 1598 3.958798 ACATGCTCCTACCTACGTGTTAT 59.041 43.478 0.00 0.00 0.00 1.89
747 1599 4.037684 ACATGCTCCTACCTACGTGTTATC 59.962 45.833 0.00 0.00 0.00 1.75
748 1600 2.954318 TGCTCCTACCTACGTGTTATCC 59.046 50.000 0.00 0.00 0.00 2.59
749 1601 3.220940 GCTCCTACCTACGTGTTATCCT 58.779 50.000 0.00 0.00 0.00 3.24
750 1602 4.141413 TGCTCCTACCTACGTGTTATCCTA 60.141 45.833 0.00 0.00 0.00 2.94
751 1603 4.215185 GCTCCTACCTACGTGTTATCCTAC 59.785 50.000 0.00 0.00 0.00 3.18
752 1604 4.718961 TCCTACCTACGTGTTATCCTACC 58.281 47.826 0.00 0.00 0.00 3.18
753 1605 4.413520 TCCTACCTACGTGTTATCCTACCT 59.586 45.833 0.00 0.00 0.00 3.08
754 1606 5.606749 TCCTACCTACGTGTTATCCTACCTA 59.393 44.000 0.00 0.00 0.00 3.08
755 1607 5.936956 CCTACCTACGTGTTATCCTACCTAG 59.063 48.000 0.00 0.00 0.00 3.02
816 1683 4.586618 GGATCGATCCATGCCTCG 57.413 61.111 34.65 8.39 46.38 4.63
825 1692 1.788229 TCCATGCCTCGTCTTATCCA 58.212 50.000 0.00 0.00 0.00 3.41
827 1694 1.688735 CCATGCCTCGTCTTATCCAGA 59.311 52.381 0.00 0.00 0.00 3.86
828 1695 2.103094 CCATGCCTCGTCTTATCCAGAA 59.897 50.000 0.00 0.00 31.28 3.02
829 1696 3.432186 CCATGCCTCGTCTTATCCAGAAA 60.432 47.826 0.00 0.00 31.28 2.52
830 1697 3.973206 TGCCTCGTCTTATCCAGAAAA 57.027 42.857 0.00 0.00 31.28 2.29
902 1769 2.613506 CCGAAACCACGGTCTTGCC 61.614 63.158 0.00 0.00 46.70 4.52
1012 1887 1.140452 GCTCTGCCCATCTCATTCTCA 59.860 52.381 0.00 0.00 0.00 3.27
1053 1964 5.024785 ACTAATTCACTTCCTTCGGATCC 57.975 43.478 0.00 0.00 0.00 3.36
1082 2004 4.093291 CCAAGCTCTGCTCCCGCT 62.093 66.667 0.00 0.00 38.25 5.52
1205 3570 2.353605 GCACTGCTCTGCTCCTATATCC 60.354 54.545 0.00 0.00 34.06 2.59
1268 3711 4.155826 TCTTGATTAACATTCCTGCGTTGG 59.844 41.667 0.00 0.00 0.00 3.77
1383 3868 5.627735 GCCATTCAGTTCCAGAGTTCATAGA 60.628 44.000 0.00 0.00 0.00 1.98
1387 3872 5.784177 TCAGTTCCAGAGTTCATAGAACAC 58.216 41.667 11.92 6.01 39.39 3.32
1399 3886 8.659925 AGTTCATAGAACACATCTCATGAATC 57.340 34.615 11.92 0.00 38.68 2.52
1400 3887 8.262933 AGTTCATAGAACACATCTCATGAATCA 58.737 33.333 11.92 0.00 38.68 2.57
1401 3888 8.886719 GTTCATAGAACACATCTCATGAATCAA 58.113 33.333 0.00 0.00 38.68 2.57
1402 3889 8.429493 TCATAGAACACATCTCATGAATCAAC 57.571 34.615 0.00 0.00 39.71 3.18
1403 3890 5.791367 AGAACACATCTCATGAATCAACG 57.209 39.130 0.00 0.00 30.46 4.10
1404 3891 4.093998 AGAACACATCTCATGAATCAACGC 59.906 41.667 0.00 0.00 30.46 4.84
1405 3892 2.349580 ACACATCTCATGAATCAACGCG 59.650 45.455 3.53 3.53 0.00 6.01
1406 3893 2.349580 CACATCTCATGAATCAACGCGT 59.650 45.455 5.58 5.58 0.00 6.01
1407 3894 3.002791 ACATCTCATGAATCAACGCGTT 58.997 40.909 20.79 20.79 0.00 4.84
1408 3895 4.032786 CACATCTCATGAATCAACGCGTTA 59.967 41.667 26.11 13.51 0.00 3.18
1409 3896 4.032900 ACATCTCATGAATCAACGCGTTAC 59.967 41.667 26.11 16.00 0.00 2.50
1410 3897 2.927477 TCTCATGAATCAACGCGTTACC 59.073 45.455 26.11 13.81 0.00 2.85
1411 3898 2.930040 CTCATGAATCAACGCGTTACCT 59.070 45.455 26.11 11.44 0.00 3.08
1412 3899 2.670905 TCATGAATCAACGCGTTACCTG 59.329 45.455 26.11 13.66 0.00 4.00
1413 3900 2.157834 TGAATCAACGCGTTACCTGT 57.842 45.000 26.11 8.35 0.00 4.00
1414 3901 3.300852 TGAATCAACGCGTTACCTGTA 57.699 42.857 26.11 7.03 0.00 2.74
1742 5199 7.559533 TGTATGTAATAATGTGGCCATGTTCTT 59.440 33.333 9.72 8.67 0.00 2.52
1743 5200 6.849085 TGTAATAATGTGGCCATGTTCTTT 57.151 33.333 9.72 2.90 0.00 2.52
1744 5201 6.862209 TGTAATAATGTGGCCATGTTCTTTC 58.138 36.000 9.72 4.99 0.00 2.62
1745 5202 5.343307 AATAATGTGGCCATGTTCTTTCC 57.657 39.130 9.72 0.00 0.00 3.13
1746 5203 2.307496 ATGTGGCCATGTTCTTTCCA 57.693 45.000 9.72 0.00 0.00 3.53
1749 5206 0.251742 TGGCCATGTTCTTTCCAGGG 60.252 55.000 0.00 0.00 36.85 4.45
1807 5267 6.837471 ACCACCAGTTTTTGTACAACTTTA 57.163 33.333 8.07 0.00 31.83 1.85
1852 5319 9.903682 ATCTCACTTATTTCTTGTTTGTGATTG 57.096 29.630 0.00 0.00 33.42 2.67
1861 5328 5.856156 TCTTGTTTGTGATTGCCATTTGAT 58.144 33.333 0.00 0.00 0.00 2.57
1870 5337 4.097589 TGATTGCCATTTGATATGCGTCAA 59.902 37.500 0.00 0.00 36.38 3.18
1871 5338 3.696281 TGCCATTTGATATGCGTCAAG 57.304 42.857 0.00 0.00 39.13 3.02
1872 5339 3.277715 TGCCATTTGATATGCGTCAAGA 58.722 40.909 0.00 0.00 39.13 3.02
1873 5340 3.065233 TGCCATTTGATATGCGTCAAGAC 59.935 43.478 0.00 0.00 39.13 3.01
1875 5342 3.303329 CCATTTGATATGCGTCAAGACCG 60.303 47.826 0.00 0.00 39.13 4.79
1876 5343 2.951457 TTGATATGCGTCAAGACCGA 57.049 45.000 0.00 0.00 33.41 4.69
1877 5344 2.492019 TGATATGCGTCAAGACCGAG 57.508 50.000 0.00 0.00 0.00 4.63
1878 5345 1.749063 TGATATGCGTCAAGACCGAGT 59.251 47.619 0.00 0.00 0.00 4.18
1879 5346 2.946990 TGATATGCGTCAAGACCGAGTA 59.053 45.455 0.00 0.00 0.00 2.59
1881 5348 1.992170 ATGCGTCAAGACCGAGTAAC 58.008 50.000 0.00 0.00 0.00 2.50
1882 5349 0.669619 TGCGTCAAGACCGAGTAACA 59.330 50.000 0.00 0.00 0.00 2.41
1883 5350 1.058404 GCGTCAAGACCGAGTAACAC 58.942 55.000 0.00 0.00 0.00 3.32
1884 5351 1.335689 GCGTCAAGACCGAGTAACACT 60.336 52.381 0.00 0.00 0.00 3.55
1885 5352 2.095567 GCGTCAAGACCGAGTAACACTA 60.096 50.000 0.00 0.00 0.00 2.74
1886 5353 3.744987 CGTCAAGACCGAGTAACACTAG 58.255 50.000 0.00 0.00 0.00 2.57
1887 5354 3.188048 CGTCAAGACCGAGTAACACTAGT 59.812 47.826 0.00 0.00 0.00 2.57
1890 5357 5.411053 GTCAAGACCGAGTAACACTAGTACT 59.589 44.000 0.00 0.00 0.00 2.73
1891 5358 6.591834 GTCAAGACCGAGTAACACTAGTACTA 59.408 42.308 1.89 1.89 0.00 1.82
1892 5359 6.815641 TCAAGACCGAGTAACACTAGTACTAG 59.184 42.308 25.30 25.30 39.04 2.57
1893 5360 6.293004 AGACCGAGTAACACTAGTACTAGT 57.707 41.667 26.61 26.61 46.52 2.57
1894 5361 7.411486 AGACCGAGTAACACTAGTACTAGTA 57.589 40.000 30.34 16.00 43.98 1.82
1896 5363 7.123547 AGACCGAGTAACACTAGTACTAGTAGT 59.876 40.741 30.34 25.57 43.98 2.73
1898 5365 8.410141 ACCGAGTAACACTAGTACTAGTAGTAG 58.590 40.741 30.75 30.75 43.98 2.57
1899 5366 8.625651 CCGAGTAACACTAGTACTAGTAGTAGA 58.374 40.741 35.75 19.84 43.98 2.59
1923 5390 6.831976 ACTACTACTTCATTCATTGGATCCC 58.168 40.000 9.90 0.00 0.00 3.85
1924 5391 5.053978 ACTACTTCATTCATTGGATCCCC 57.946 43.478 9.90 0.00 0.00 4.81
1925 5392 4.728860 ACTACTTCATTCATTGGATCCCCT 59.271 41.667 9.90 0.00 0.00 4.79
1926 5393 5.911178 ACTACTTCATTCATTGGATCCCCTA 59.089 40.000 9.90 0.00 0.00 3.53
1927 5394 5.053978 ACTTCATTCATTGGATCCCCTAC 57.946 43.478 9.90 0.00 0.00 3.18
1929 5396 5.911178 ACTTCATTCATTGGATCCCCTACTA 59.089 40.000 9.90 0.00 0.00 1.82
1930 5397 5.825593 TCATTCATTGGATCCCCTACTAC 57.174 43.478 9.90 0.00 0.00 2.73
1931 5398 5.476983 TCATTCATTGGATCCCCTACTACT 58.523 41.667 9.90 0.00 0.00 2.57
1932 5399 5.544176 TCATTCATTGGATCCCCTACTACTC 59.456 44.000 9.90 0.00 0.00 2.59
1933 5400 4.834406 TCATTGGATCCCCTACTACTCT 57.166 45.455 9.90 0.00 0.00 3.24
1934 5401 4.742012 TCATTGGATCCCCTACTACTCTC 58.258 47.826 9.90 0.00 0.00 3.20
1935 5402 3.614568 TTGGATCCCCTACTACTCTCC 57.385 52.381 9.90 0.00 0.00 3.71
1936 5403 2.803215 TGGATCCCCTACTACTCTCCT 58.197 52.381 9.90 0.00 0.00 3.69
1937 5404 2.717515 TGGATCCCCTACTACTCTCCTC 59.282 54.545 9.90 0.00 0.00 3.71
1938 5405 2.990998 GGATCCCCTACTACTCTCCTCT 59.009 54.545 0.00 0.00 0.00 3.69
1939 5406 3.009805 GGATCCCCTACTACTCTCCTCTC 59.990 56.522 0.00 0.00 0.00 3.20
1940 5407 3.441505 TCCCCTACTACTCTCCTCTCT 57.558 52.381 0.00 0.00 0.00 3.10
1941 5408 3.750221 TCCCCTACTACTCTCCTCTCTT 58.250 50.000 0.00 0.00 0.00 2.85
1942 5409 3.717913 TCCCCTACTACTCTCCTCTCTTC 59.282 52.174 0.00 0.00 0.00 2.87
1943 5410 3.720002 CCCCTACTACTCTCCTCTCTTCT 59.280 52.174 0.00 0.00 0.00 2.85
1944 5411 4.909088 CCCCTACTACTCTCCTCTCTTCTA 59.091 50.000 0.00 0.00 0.00 2.10
1945 5412 5.550403 CCCCTACTACTCTCCTCTCTTCTAT 59.450 48.000 0.00 0.00 0.00 1.98
1946 5413 6.296259 CCCCTACTACTCTCCTCTCTTCTATC 60.296 50.000 0.00 0.00 0.00 2.08
1947 5414 6.296259 CCCTACTACTCTCCTCTCTTCTATCC 60.296 50.000 0.00 0.00 0.00 2.59
1948 5415 5.578157 ACTACTCTCCTCTCTTCTATCCC 57.422 47.826 0.00 0.00 0.00 3.85
1949 5416 3.502123 ACTCTCCTCTCTTCTATCCCG 57.498 52.381 0.00 0.00 0.00 5.14
1950 5417 3.050089 ACTCTCCTCTCTTCTATCCCGA 58.950 50.000 0.00 0.00 0.00 5.14
1951 5418 3.460340 ACTCTCCTCTCTTCTATCCCGAA 59.540 47.826 0.00 0.00 0.00 4.30
1952 5419 4.079672 ACTCTCCTCTCTTCTATCCCGAAA 60.080 45.833 0.00 0.00 0.00 3.46
1953 5420 5.068215 TCTCCTCTCTTCTATCCCGAAAT 57.932 43.478 0.00 0.00 0.00 2.17
1954 5421 4.830046 TCTCCTCTCTTCTATCCCGAAATG 59.170 45.833 0.00 0.00 0.00 2.32
1955 5422 3.322254 TCCTCTCTTCTATCCCGAAATGC 59.678 47.826 0.00 0.00 0.00 3.56
1956 5423 3.070159 CCTCTCTTCTATCCCGAAATGCA 59.930 47.826 0.00 0.00 0.00 3.96
1957 5424 4.054671 CTCTCTTCTATCCCGAAATGCAC 58.945 47.826 0.00 0.00 0.00 4.57
1958 5425 2.797156 CTCTTCTATCCCGAAATGCACG 59.203 50.000 0.00 0.00 0.00 5.34
1959 5426 2.167693 TCTTCTATCCCGAAATGCACGT 59.832 45.455 0.00 0.00 0.00 4.49
1960 5427 1.934589 TCTATCCCGAAATGCACGTG 58.065 50.000 12.28 12.28 0.00 4.49
1961 5428 0.937304 CTATCCCGAAATGCACGTGG 59.063 55.000 18.88 0.00 0.00 4.94
1962 5429 0.462937 TATCCCGAAATGCACGTGGG 60.463 55.000 18.88 8.20 41.43 4.61
1963 5430 3.439540 CCCGAAATGCACGTGGGG 61.440 66.667 18.88 14.14 36.16 4.96
1964 5431 2.359354 CCGAAATGCACGTGGGGA 60.359 61.111 18.88 0.00 0.00 4.81
1965 5432 1.748879 CCGAAATGCACGTGGGGAT 60.749 57.895 18.88 0.00 0.00 3.85
1966 5433 1.714899 CCGAAATGCACGTGGGGATC 61.715 60.000 18.88 0.00 0.00 3.36
1967 5434 1.024046 CGAAATGCACGTGGGGATCA 61.024 55.000 18.88 6.47 0.00 2.92
1968 5435 1.392589 GAAATGCACGTGGGGATCAT 58.607 50.000 18.88 8.73 0.00 2.45
1969 5436 1.066002 GAAATGCACGTGGGGATCATG 59.934 52.381 18.88 0.00 38.32 3.07
1970 5437 1.386525 AATGCACGTGGGGATCATGC 61.387 55.000 18.88 0.00 35.84 4.06
1971 5438 3.211963 GCACGTGGGGATCATGCC 61.212 66.667 18.88 0.00 35.84 4.40
1972 5439 2.271821 CACGTGGGGATCATGCCA 59.728 61.111 7.95 0.00 35.84 4.92
1973 5440 2.114670 CACGTGGGGATCATGCCAC 61.115 63.158 7.95 9.50 35.84 5.01
1974 5441 2.516930 CGTGGGGATCATGCCACC 60.517 66.667 12.84 6.90 0.00 4.61
1975 5442 3.010144 GTGGGGATCATGCCACCT 58.990 61.111 8.59 0.00 0.00 4.00
1976 5443 1.454479 GTGGGGATCATGCCACCTG 60.454 63.158 8.59 0.00 0.00 4.00
1977 5444 1.619057 TGGGGATCATGCCACCTGA 60.619 57.895 0.00 0.00 0.00 3.86
1978 5445 1.152881 GGGGATCATGCCACCTGAC 60.153 63.158 0.00 0.00 0.00 3.51
1979 5446 1.152881 GGGATCATGCCACCTGACC 60.153 63.158 0.00 0.00 0.00 4.02
1980 5447 1.639635 GGGATCATGCCACCTGACCT 61.640 60.000 0.00 0.00 0.00 3.85
1981 5448 0.179034 GGATCATGCCACCTGACCTC 60.179 60.000 0.00 0.00 0.00 3.85
1982 5449 0.543277 GATCATGCCACCTGACCTCA 59.457 55.000 0.00 0.00 0.00 3.86
1983 5450 0.254178 ATCATGCCACCTGACCTCAC 59.746 55.000 0.00 0.00 0.00 3.51
1984 5451 1.126948 TCATGCCACCTGACCTCACA 61.127 55.000 0.00 0.00 0.00 3.58
1985 5452 0.957395 CATGCCACCTGACCTCACAC 60.957 60.000 0.00 0.00 0.00 3.82
1986 5453 1.130054 ATGCCACCTGACCTCACACT 61.130 55.000 0.00 0.00 0.00 3.55
1987 5454 0.471022 TGCCACCTGACCTCACACTA 60.471 55.000 0.00 0.00 0.00 2.74
1988 5455 0.905357 GCCACCTGACCTCACACTAT 59.095 55.000 0.00 0.00 0.00 2.12
1989 5456 2.108168 GCCACCTGACCTCACACTATA 58.892 52.381 0.00 0.00 0.00 1.31
1990 5457 2.500098 GCCACCTGACCTCACACTATAA 59.500 50.000 0.00 0.00 0.00 0.98
1991 5458 3.055385 GCCACCTGACCTCACACTATAAA 60.055 47.826 0.00 0.00 0.00 1.40
1992 5459 4.384208 GCCACCTGACCTCACACTATAAAT 60.384 45.833 0.00 0.00 0.00 1.40
1993 5460 5.360591 CCACCTGACCTCACACTATAAATC 58.639 45.833 0.00 0.00 0.00 2.17
1994 5461 5.129485 CCACCTGACCTCACACTATAAATCT 59.871 44.000 0.00 0.00 0.00 2.40
1995 5462 6.352222 CCACCTGACCTCACACTATAAATCTT 60.352 42.308 0.00 0.00 0.00 2.40
1996 5463 7.106239 CACCTGACCTCACACTATAAATCTTT 58.894 38.462 0.00 0.00 0.00 2.52
1997 5464 7.607991 CACCTGACCTCACACTATAAATCTTTT 59.392 37.037 0.00 0.00 0.00 2.27
1998 5465 7.607991 ACCTGACCTCACACTATAAATCTTTTG 59.392 37.037 0.00 0.00 0.00 2.44
1999 5466 7.824289 CCTGACCTCACACTATAAATCTTTTGA 59.176 37.037 0.00 0.00 0.00 2.69
2000 5467 8.777865 TGACCTCACACTATAAATCTTTTGAG 57.222 34.615 0.00 0.00 0.00 3.02
2002 5469 7.559590 CCTCACACTATAAATCTTTTGAGGG 57.440 40.000 6.43 0.00 43.48 4.30
2003 5470 7.338710 CCTCACACTATAAATCTTTTGAGGGA 58.661 38.462 6.43 0.00 43.48 4.20
2004 5471 7.497249 CCTCACACTATAAATCTTTTGAGGGAG 59.503 40.741 6.43 0.00 43.48 4.30
2005 5472 8.146053 TCACACTATAAATCTTTTGAGGGAGA 57.854 34.615 0.00 0.00 0.00 3.71
2006 5473 8.772250 TCACACTATAAATCTTTTGAGGGAGAT 58.228 33.333 0.00 0.00 34.19 2.75
2007 5474 8.834465 CACACTATAAATCTTTTGAGGGAGATG 58.166 37.037 0.00 0.00 33.12 2.90
2008 5475 8.772250 ACACTATAAATCTTTTGAGGGAGATGA 58.228 33.333 0.00 0.00 33.12 2.92
2009 5476 9.790344 CACTATAAATCTTTTGAGGGAGATGAT 57.210 33.333 0.00 0.00 33.12 2.45
2012 5479 6.786967 AAATCTTTTGAGGGAGATGATTGG 57.213 37.500 0.00 0.00 33.12 3.16
2013 5480 4.934797 TCTTTTGAGGGAGATGATTGGT 57.065 40.909 0.00 0.00 0.00 3.67
2014 5481 5.261040 TCTTTTGAGGGAGATGATTGGTT 57.739 39.130 0.00 0.00 0.00 3.67
2015 5482 5.644188 TCTTTTGAGGGAGATGATTGGTTT 58.356 37.500 0.00 0.00 0.00 3.27
2016 5483 6.789268 TCTTTTGAGGGAGATGATTGGTTTA 58.211 36.000 0.00 0.00 0.00 2.01
2017 5484 7.413446 TCTTTTGAGGGAGATGATTGGTTTAT 58.587 34.615 0.00 0.00 0.00 1.40
2018 5485 7.340232 TCTTTTGAGGGAGATGATTGGTTTATG 59.660 37.037 0.00 0.00 0.00 1.90
2019 5486 4.464008 TGAGGGAGATGATTGGTTTATGC 58.536 43.478 0.00 0.00 0.00 3.14
2020 5487 3.823304 GAGGGAGATGATTGGTTTATGCC 59.177 47.826 0.00 0.00 0.00 4.40
2021 5488 2.554032 GGGAGATGATTGGTTTATGCCG 59.446 50.000 0.00 0.00 0.00 5.69
2022 5489 2.554032 GGAGATGATTGGTTTATGCCGG 59.446 50.000 0.00 0.00 0.00 6.13
2023 5490 1.956477 AGATGATTGGTTTATGCCGGC 59.044 47.619 22.73 22.73 0.00 6.13
2024 5491 0.667993 ATGATTGGTTTATGCCGGCG 59.332 50.000 23.90 0.00 0.00 6.46
2025 5492 1.358759 GATTGGTTTATGCCGGCGG 59.641 57.895 24.35 24.35 0.00 6.13
2026 5493 1.077357 ATTGGTTTATGCCGGCGGA 60.077 52.632 33.44 15.74 0.00 5.54
2027 5494 0.467290 ATTGGTTTATGCCGGCGGAT 60.467 50.000 33.44 21.66 0.00 4.18
2028 5495 1.098712 TTGGTTTATGCCGGCGGATC 61.099 55.000 33.44 14.10 0.00 3.36
2029 5496 1.227853 GGTTTATGCCGGCGGATCT 60.228 57.895 33.44 15.42 0.00 2.75
2030 5497 1.228657 GGTTTATGCCGGCGGATCTC 61.229 60.000 33.44 12.81 0.00 2.75
2031 5498 0.531974 GTTTATGCCGGCGGATCTCA 60.532 55.000 33.44 18.90 0.00 3.27
2032 5499 0.396435 TTTATGCCGGCGGATCTCAT 59.604 50.000 33.44 24.44 0.00 2.90
2033 5500 0.320683 TTATGCCGGCGGATCTCATG 60.321 55.000 33.44 0.00 0.00 3.07
2034 5501 2.786539 TATGCCGGCGGATCTCATGC 62.787 60.000 33.44 12.21 0.00 4.06
2041 5508 2.419198 GGATCTCATGCGAGGCGT 59.581 61.111 0.00 0.00 39.95 5.68
2042 5509 1.663074 GGATCTCATGCGAGGCGTC 60.663 63.158 0.00 0.00 39.95 5.19
2043 5510 1.663074 GATCTCATGCGAGGCGTCC 60.663 63.158 0.00 0.00 39.95 4.79
2044 5511 3.157217 ATCTCATGCGAGGCGTCCC 62.157 63.158 0.00 0.00 39.95 4.46
2045 5512 3.842923 CTCATGCGAGGCGTCCCT 61.843 66.667 0.00 0.00 46.74 4.20
2053 5520 2.120718 AGGCGTCCCTCACCTCTT 59.879 61.111 0.00 0.00 36.46 2.85
2054 5521 1.536662 AGGCGTCCCTCACCTCTTT 60.537 57.895 0.00 0.00 36.46 2.52
2055 5522 1.079057 GGCGTCCCTCACCTCTTTC 60.079 63.158 0.00 0.00 0.00 2.62
2056 5523 1.545706 GGCGTCCCTCACCTCTTTCT 61.546 60.000 0.00 0.00 0.00 2.52
2057 5524 0.321996 GCGTCCCTCACCTCTTTCTT 59.678 55.000 0.00 0.00 0.00 2.52
2058 5525 1.941668 GCGTCCCTCACCTCTTTCTTG 60.942 57.143 0.00 0.00 0.00 3.02
2059 5526 1.344763 CGTCCCTCACCTCTTTCTTGT 59.655 52.381 0.00 0.00 0.00 3.16
2060 5527 2.772287 GTCCCTCACCTCTTTCTTGTG 58.228 52.381 0.00 0.00 0.00 3.33
2061 5528 2.368875 GTCCCTCACCTCTTTCTTGTGA 59.631 50.000 0.00 0.00 37.45 3.58
2062 5529 2.368875 TCCCTCACCTCTTTCTTGTGAC 59.631 50.000 0.00 0.00 35.34 3.67
2063 5530 2.104792 CCCTCACCTCTTTCTTGTGACA 59.895 50.000 0.00 0.00 35.34 3.58
2064 5531 3.134458 CCTCACCTCTTTCTTGTGACAC 58.866 50.000 0.00 0.00 35.34 3.67
2065 5532 2.797156 CTCACCTCTTTCTTGTGACACG 59.203 50.000 0.22 0.00 35.34 4.49
2066 5533 2.167693 TCACCTCTTTCTTGTGACACGT 59.832 45.455 0.22 0.00 34.28 4.49
2067 5534 2.285220 CACCTCTTTCTTGTGACACGTG 59.715 50.000 15.48 15.48 31.66 4.49
2068 5535 2.093658 ACCTCTTTCTTGTGACACGTGT 60.094 45.455 23.64 23.64 0.00 4.49
2069 5536 2.540101 CCTCTTTCTTGTGACACGTGTC 59.460 50.000 36.01 36.01 44.97 3.67
2070 5537 3.448686 CTCTTTCTTGTGACACGTGTCT 58.551 45.455 39.62 14.34 44.99 3.41
2071 5538 3.857052 TCTTTCTTGTGACACGTGTCTT 58.143 40.909 39.62 13.56 44.99 3.01
2072 5539 3.616821 TCTTTCTTGTGACACGTGTCTTG 59.383 43.478 39.62 27.66 44.99 3.02
2073 5540 1.934589 TCTTGTGACACGTGTCTTGG 58.065 50.000 39.62 27.82 44.99 3.61
2074 5541 0.937304 CTTGTGACACGTGTCTTGGG 59.063 55.000 39.62 25.96 44.99 4.12
2075 5542 0.250793 TTGTGACACGTGTCTTGGGT 59.749 50.000 39.62 11.23 44.99 4.51
2076 5543 0.179094 TGTGACACGTGTCTTGGGTC 60.179 55.000 39.62 24.75 44.99 4.46
2077 5544 0.878961 GTGACACGTGTCTTGGGTCC 60.879 60.000 39.62 19.16 44.99 4.46
2078 5545 1.331399 TGACACGTGTCTTGGGTCCA 61.331 55.000 39.62 21.35 44.99 4.02
2079 5546 0.034896 GACACGTGTCTTGGGTCCAT 59.965 55.000 35.51 3.91 41.65 3.41
2080 5547 0.034896 ACACGTGTCTTGGGTCCATC 59.965 55.000 17.22 0.00 0.00 3.51
2081 5548 0.321671 CACGTGTCTTGGGTCCATCT 59.678 55.000 7.58 0.00 0.00 2.90
2082 5549 1.548719 CACGTGTCTTGGGTCCATCTA 59.451 52.381 7.58 0.00 0.00 1.98
2083 5550 1.825474 ACGTGTCTTGGGTCCATCTAG 59.175 52.381 0.00 0.00 0.00 2.43
2084 5551 1.825474 CGTGTCTTGGGTCCATCTAGT 59.175 52.381 0.00 0.00 0.00 2.57
2085 5552 3.021695 CGTGTCTTGGGTCCATCTAGTA 58.978 50.000 0.00 0.00 0.00 1.82
2086 5553 3.181489 CGTGTCTTGGGTCCATCTAGTAC 60.181 52.174 0.00 0.00 0.00 2.73
2087 5554 4.024670 GTGTCTTGGGTCCATCTAGTACT 58.975 47.826 0.00 0.00 0.00 2.73
2088 5555 5.198965 GTGTCTTGGGTCCATCTAGTACTA 58.801 45.833 1.89 1.89 0.00 1.82
2089 5556 5.834204 GTGTCTTGGGTCCATCTAGTACTAT 59.166 44.000 2.33 0.00 0.00 2.12
2090 5557 6.324254 GTGTCTTGGGTCCATCTAGTACTATT 59.676 42.308 2.33 0.00 0.00 1.73
2091 5558 6.901300 TGTCTTGGGTCCATCTAGTACTATTT 59.099 38.462 2.33 0.00 0.00 1.40
2092 5559 7.069578 TGTCTTGGGTCCATCTAGTACTATTTC 59.930 40.741 2.33 0.00 0.00 2.17
2093 5560 7.288158 GTCTTGGGTCCATCTAGTACTATTTCT 59.712 40.741 2.33 0.00 0.00 2.52
2094 5561 8.508601 TCTTGGGTCCATCTAGTACTATTTCTA 58.491 37.037 2.33 0.00 0.00 2.10
2095 5562 8.707796 TTGGGTCCATCTAGTACTATTTCTAG 57.292 38.462 2.33 0.00 36.10 2.43
2096 5563 6.720288 TGGGTCCATCTAGTACTATTTCTAGC 59.280 42.308 2.33 0.00 35.13 3.42
2097 5564 6.127952 GGGTCCATCTAGTACTATTTCTAGCG 60.128 46.154 2.33 0.00 35.13 4.26
2098 5565 6.127952 GGTCCATCTAGTACTATTTCTAGCGG 60.128 46.154 2.33 0.00 35.13 5.52
2099 5566 6.430616 GTCCATCTAGTACTATTTCTAGCGGT 59.569 42.308 2.33 0.00 35.13 5.68
2100 5567 7.002879 TCCATCTAGTACTATTTCTAGCGGTT 58.997 38.462 2.33 0.00 35.13 4.44
2101 5568 7.174599 TCCATCTAGTACTATTTCTAGCGGTTC 59.825 40.741 2.33 0.00 35.13 3.62
2102 5569 6.874288 TCTAGTACTATTTCTAGCGGTTCC 57.126 41.667 2.33 0.00 35.13 3.62
2103 5570 4.564940 AGTACTATTTCTAGCGGTTCCG 57.435 45.455 6.90 6.90 0.00 4.30
2104 5571 3.950395 AGTACTATTTCTAGCGGTTCCGT 59.050 43.478 12.81 2.87 0.00 4.69
2105 5572 3.160777 ACTATTTCTAGCGGTTCCGTG 57.839 47.619 12.81 4.32 0.00 4.94
2106 5573 1.859080 CTATTTCTAGCGGTTCCGTGC 59.141 52.381 12.81 0.00 0.00 5.34
2107 5574 1.082117 ATTTCTAGCGGTTCCGTGCG 61.082 55.000 12.81 2.01 35.87 5.34
2108 5575 2.144833 TTTCTAGCGGTTCCGTGCGA 62.145 55.000 12.81 4.19 35.87 5.10
2109 5576 1.940883 TTCTAGCGGTTCCGTGCGAT 61.941 55.000 12.81 0.00 35.87 4.58
2110 5577 1.944676 CTAGCGGTTCCGTGCGATC 60.945 63.158 12.81 0.00 35.87 3.69
2111 5578 2.607668 CTAGCGGTTCCGTGCGATCA 62.608 60.000 12.81 0.00 35.87 2.92
2112 5579 2.011741 TAGCGGTTCCGTGCGATCAT 62.012 55.000 12.81 0.00 35.87 2.45
2113 5580 3.005898 CGGTTCCGTGCGATCATG 58.994 61.111 2.82 0.00 0.00 3.07
2114 5581 1.809619 CGGTTCCGTGCGATCATGT 60.810 57.895 2.82 0.00 0.00 3.21
2115 5582 1.715585 GGTTCCGTGCGATCATGTG 59.284 57.895 0.00 0.00 0.00 3.21
2116 5583 1.060937 GTTCCGTGCGATCATGTGC 59.939 57.895 0.00 0.00 0.00 4.57
2117 5584 2.451990 TTCCGTGCGATCATGTGCG 61.452 57.895 5.77 5.77 0.00 5.34
2118 5585 3.188100 CCGTGCGATCATGTGCGT 61.188 61.111 10.60 0.00 0.00 5.24
2119 5586 2.020423 CGTGCGATCATGTGCGTG 59.980 61.111 10.60 0.00 0.00 5.34
2120 5587 2.729675 CGTGCGATCATGTGCGTGT 61.730 57.895 10.60 0.00 0.00 4.49
2121 5588 1.225827 GTGCGATCATGTGCGTGTG 60.226 57.895 10.60 0.00 0.00 3.82
2122 5589 2.389809 TGCGATCATGTGCGTGTGG 61.390 57.895 10.60 0.00 0.00 4.17
2123 5590 2.400798 CGATCATGTGCGTGTGGC 59.599 61.111 0.00 0.00 43.96 5.01
2132 5599 2.665185 GCGTGTGGCGGAGAAAGT 60.665 61.111 0.00 0.00 41.69 2.66
2133 5600 2.251642 GCGTGTGGCGGAGAAAGTT 61.252 57.895 0.00 0.00 41.69 2.66
2134 5601 1.860078 CGTGTGGCGGAGAAAGTTC 59.140 57.895 0.00 0.00 36.85 3.01
2135 5602 0.600255 CGTGTGGCGGAGAAAGTTCT 60.600 55.000 0.00 0.00 41.00 3.01
2151 5618 8.345724 AGAAAGTTCTCTGCAATATCATTTGT 57.654 30.769 0.00 0.00 29.94 2.83
2152 5619 8.242053 AGAAAGTTCTCTGCAATATCATTTGTG 58.758 33.333 0.00 0.00 29.94 3.33
2153 5620 7.458409 AAGTTCTCTGCAATATCATTTGTGT 57.542 32.000 0.00 0.00 0.00 3.72
2154 5621 7.458409 AGTTCTCTGCAATATCATTTGTGTT 57.542 32.000 0.00 0.00 0.00 3.32
2155 5622 7.310664 AGTTCTCTGCAATATCATTTGTGTTG 58.689 34.615 0.00 0.00 0.00 3.33
2179 5646 7.026247 TGGGATATAACTATTGGGTATGACCA 58.974 38.462 0.00 0.00 41.02 4.02
2188 5661 2.452937 GGTATGACCAGAGGGGCCC 61.453 68.421 17.12 17.12 44.10 5.80
2215 5688 1.411246 ACCGCTGGCGACTTAATGATA 59.589 47.619 16.79 0.00 42.83 2.15
2242 5715 2.106844 GGGTTATGAAGCAAGCCCG 58.893 57.895 0.00 0.00 37.54 6.13
2398 5871 3.443045 CCGGGCATCAACCTGTGC 61.443 66.667 0.00 0.00 40.55 4.57
2439 6218 1.956802 CGGGTGAAGGCAAGAAACC 59.043 57.895 0.00 0.00 0.00 3.27
2468 6247 4.157289 TCGAGAACTAGGTCAAGCGTATTT 59.843 41.667 11.14 0.00 0.00 1.40
2594 6626 4.266714 CCGATTAACCCCTTCAAGCTAAA 58.733 43.478 0.00 0.00 0.00 1.85
2598 6630 6.596497 CGATTAACCCCTTCAAGCTAAACTAA 59.404 38.462 0.00 0.00 0.00 2.24
2663 7362 3.182972 CCGTGTTAAGTCGACGACAATTT 59.817 43.478 28.31 16.76 35.05 1.82
2664 7363 4.131714 CGTGTTAAGTCGACGACAATTTG 58.868 43.478 28.31 9.11 35.05 2.32
2665 7364 4.317558 CGTGTTAAGTCGACGACAATTTGT 60.318 41.667 28.31 0.63 35.05 2.83
2666 7365 4.896238 GTGTTAAGTCGACGACAATTTGTG 59.104 41.667 28.31 2.42 34.60 3.33
2667 7366 4.567558 TGTTAAGTCGACGACAATTTGTGT 59.432 37.500 28.31 5.63 45.74 3.72
2668 7367 5.063691 TGTTAAGTCGACGACAATTTGTGTT 59.936 36.000 28.31 14.08 41.96 3.32
2669 7368 3.585748 AGTCGACGACAATTTGTGTTG 57.414 42.857 28.31 9.29 45.98 3.33
2671 7370 1.666189 TCGACGACAATTTGTGTTGCA 59.334 42.857 6.80 0.00 44.58 4.08
2672 7371 2.096013 TCGACGACAATTTGTGTTGCAA 59.904 40.909 6.80 0.00 44.58 4.08
2674 7373 7.424747 GTCGACGACAATTTGTGTTGCAAAC 62.425 44.000 22.66 2.65 44.58 2.93
2686 7385 2.535331 GTTGCAAACTTTCTTCCGCAA 58.465 42.857 0.00 0.00 45.32 4.85
2687 7386 3.123050 GTTGCAAACTTTCTTCCGCAAT 58.877 40.909 0.00 0.00 45.32 3.56
2688 7387 4.295051 GTTGCAAACTTTCTTCCGCAATA 58.705 39.130 0.00 0.00 45.32 1.90
2689 7388 4.576216 TGCAAACTTTCTTCCGCAATAA 57.424 36.364 0.00 0.00 0.00 1.40
2690 7389 4.295051 TGCAAACTTTCTTCCGCAATAAC 58.705 39.130 0.00 0.00 0.00 1.89
2691 7390 4.037446 TGCAAACTTTCTTCCGCAATAACT 59.963 37.500 0.00 0.00 0.00 2.24
2692 7391 4.617223 GCAAACTTTCTTCCGCAATAACTC 59.383 41.667 0.00 0.00 0.00 3.01
2695 7394 4.894784 ACTTTCTTCCGCAATAACTCTCA 58.105 39.130 0.00 0.00 0.00 3.27
2697 7396 5.352569 ACTTTCTTCCGCAATAACTCTCATG 59.647 40.000 0.00 0.00 0.00 3.07
2698 7397 4.471904 TCTTCCGCAATAACTCTCATGT 57.528 40.909 0.00 0.00 0.00 3.21
2700 7399 4.631377 TCTTCCGCAATAACTCTCATGTTG 59.369 41.667 0.00 0.00 0.00 3.33
2706 9040 5.401972 CGCAATAACTCTCATGTTGCAAAAA 59.598 36.000 0.00 0.00 42.78 1.94
2749 9230 1.095228 ATCTGCAACATTACCGGCGG 61.095 55.000 27.06 27.06 0.00 6.13
2750 9231 1.743623 CTGCAACATTACCGGCGGA 60.744 57.895 35.78 12.34 34.60 5.54
2751 9232 1.302383 CTGCAACATTACCGGCGGAA 61.302 55.000 35.78 22.10 34.60 4.30
2763 9244 2.877691 GCGGAAGTTGCCCATGTC 59.122 61.111 0.00 0.00 0.00 3.06
2764 9245 2.700773 GCGGAAGTTGCCCATGTCC 61.701 63.158 0.00 0.00 0.00 4.02
2766 9247 1.002624 GGAAGTTGCCCATGTCCGA 60.003 57.895 0.00 0.00 0.00 4.55
2767 9248 1.305930 GGAAGTTGCCCATGTCCGAC 61.306 60.000 0.00 0.00 0.00 4.79
2768 9249 1.303317 AAGTTGCCCATGTCCGACC 60.303 57.895 0.00 0.00 0.00 4.79
2771 9252 1.378382 TTGCCCATGTCCGACCATG 60.378 57.895 7.15 7.15 41.52 3.66
2772 9253 3.211963 GCCCATGTCCGACCATGC 61.212 66.667 8.30 0.00 40.72 4.06
2775 9256 3.576356 CATGTCCGACCATGCCGC 61.576 66.667 0.00 0.00 36.15 6.53
2795 9276 1.279527 CGCACGCCGACAAGTTTCTA 61.280 55.000 0.00 0.00 40.02 2.10
2796 9277 0.163146 GCACGCCGACAAGTTTCTAC 59.837 55.000 0.00 0.00 0.00 2.59
2799 9280 1.862827 ACGCCGACAAGTTTCTACAAC 59.137 47.619 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.753247 GGAGTGTCCTAGTTGGGATCT 58.247 52.381 0.00 0.00 37.73 2.75
5 6 1.409427 CGGAGTGTCCTAGTTGGGATC 59.591 57.143 0.00 0.00 37.73 3.36
7 8 0.113776 ACGGAGTGTCCTAGTTGGGA 59.886 55.000 0.00 0.00 42.51 4.37
21 22 3.670625 TGTTTTACAGGGATTCACGGAG 58.329 45.455 0.00 0.00 0.00 4.63
22 23 3.773418 TGTTTTACAGGGATTCACGGA 57.227 42.857 0.00 0.00 0.00 4.69
23 24 4.035208 GCTATGTTTTACAGGGATTCACGG 59.965 45.833 0.00 0.00 0.00 4.94
24 25 4.035208 GGCTATGTTTTACAGGGATTCACG 59.965 45.833 0.00 0.00 0.00 4.35
25 26 4.338400 GGGCTATGTTTTACAGGGATTCAC 59.662 45.833 0.00 0.00 0.00 3.18
26 27 4.532834 GGGCTATGTTTTACAGGGATTCA 58.467 43.478 0.00 0.00 0.00 2.57
27 28 3.564225 CGGGCTATGTTTTACAGGGATTC 59.436 47.826 0.00 0.00 0.00 2.52
28 29 3.053917 ACGGGCTATGTTTTACAGGGATT 60.054 43.478 0.00 0.00 0.00 3.01
29 30 2.508300 ACGGGCTATGTTTTACAGGGAT 59.492 45.455 0.00 0.00 0.00 3.85
30 31 1.910671 ACGGGCTATGTTTTACAGGGA 59.089 47.619 0.00 0.00 0.00 4.20
31 32 2.014128 CACGGGCTATGTTTTACAGGG 58.986 52.381 0.00 0.00 0.00 4.45
32 33 2.418628 CACACGGGCTATGTTTTACAGG 59.581 50.000 0.00 0.00 0.00 4.00
33 34 3.071479 ACACACGGGCTATGTTTTACAG 58.929 45.455 0.00 0.00 0.00 2.74
34 35 2.809119 CACACACGGGCTATGTTTTACA 59.191 45.455 0.00 0.00 0.00 2.41
35 36 2.809696 ACACACACGGGCTATGTTTTAC 59.190 45.455 0.00 0.00 0.00 2.01
36 37 3.128852 ACACACACGGGCTATGTTTTA 57.871 42.857 0.00 0.00 0.00 1.52
37 38 1.975660 ACACACACGGGCTATGTTTT 58.024 45.000 0.00 0.00 0.00 2.43
38 39 2.695359 CTACACACACGGGCTATGTTT 58.305 47.619 0.00 0.00 0.00 2.83
39 40 1.674817 GCTACACACACGGGCTATGTT 60.675 52.381 0.00 0.00 0.00 2.71
40 41 0.108329 GCTACACACACGGGCTATGT 60.108 55.000 0.00 0.00 0.00 2.29
41 42 0.108377 TGCTACACACACGGGCTATG 60.108 55.000 0.00 0.00 0.00 2.23
42 43 0.830648 ATGCTACACACACGGGCTAT 59.169 50.000 0.00 0.00 0.00 2.97
43 44 0.611200 AATGCTACACACACGGGCTA 59.389 50.000 0.00 0.00 0.00 3.93
44 45 0.955428 CAATGCTACACACACGGGCT 60.955 55.000 0.00 0.00 0.00 5.19
45 46 1.501741 CAATGCTACACACACGGGC 59.498 57.895 0.00 0.00 0.00 6.13
46 47 0.955428 AGCAATGCTACACACACGGG 60.955 55.000 5.69 0.00 36.99 5.28
47 48 0.443869 GAGCAATGCTACACACACGG 59.556 55.000 8.12 0.00 39.88 4.94
48 49 1.432514 AGAGCAATGCTACACACACG 58.567 50.000 8.12 0.00 39.88 4.49
49 50 3.904136 AAAGAGCAATGCTACACACAC 57.096 42.857 8.12 0.00 39.88 3.82
50 51 4.916983 AAAAAGAGCAATGCTACACACA 57.083 36.364 8.12 0.00 39.88 3.72
71 72 9.707957 TGGATTTATTTCAGCCTTTCCTATAAA 57.292 29.630 0.00 0.00 0.00 1.40
72 73 9.354673 CTGGATTTATTTCAGCCTTTCCTATAA 57.645 33.333 0.00 0.00 0.00 0.98
73 74 7.944554 CCTGGATTTATTTCAGCCTTTCCTATA 59.055 37.037 0.00 0.00 0.00 1.31
74 75 6.779539 CCTGGATTTATTTCAGCCTTTCCTAT 59.220 38.462 0.00 0.00 0.00 2.57
75 76 6.069088 TCCTGGATTTATTTCAGCCTTTCCTA 60.069 38.462 0.00 0.00 0.00 2.94
76 77 4.958581 CCTGGATTTATTTCAGCCTTTCCT 59.041 41.667 0.00 0.00 0.00 3.36
77 78 4.956075 TCCTGGATTTATTTCAGCCTTTCC 59.044 41.667 0.00 0.00 0.00 3.13
78 79 6.322201 TGATCCTGGATTTATTTCAGCCTTTC 59.678 38.462 11.17 0.00 0.00 2.62
79 80 6.197168 TGATCCTGGATTTATTTCAGCCTTT 58.803 36.000 11.17 0.00 0.00 3.11
80 81 5.769835 TGATCCTGGATTTATTTCAGCCTT 58.230 37.500 11.17 0.00 0.00 4.35
81 82 5.393068 TGATCCTGGATTTATTTCAGCCT 57.607 39.130 11.17 0.00 0.00 4.58
82 83 5.595952 ACTTGATCCTGGATTTATTTCAGCC 59.404 40.000 11.17 0.00 0.00 4.85
83 84 6.545298 AGACTTGATCCTGGATTTATTTCAGC 59.455 38.462 11.17 0.00 0.00 4.26
84 85 9.270640 CTAGACTTGATCCTGGATTTATTTCAG 57.729 37.037 11.17 1.08 0.00 3.02
85 86 8.992349 TCTAGACTTGATCCTGGATTTATTTCA 58.008 33.333 11.17 0.64 0.00 2.69
86 87 9.838339 TTCTAGACTTGATCCTGGATTTATTTC 57.162 33.333 11.17 4.66 0.00 2.17
90 91 9.618890 CAAATTCTAGACTTGATCCTGGATTTA 57.381 33.333 11.17 0.44 0.00 1.40
91 92 8.331740 TCAAATTCTAGACTTGATCCTGGATTT 58.668 33.333 11.17 0.00 0.00 2.17
92 93 7.865820 TCAAATTCTAGACTTGATCCTGGATT 58.134 34.615 11.17 0.00 0.00 3.01
93 94 7.443302 TCAAATTCTAGACTTGATCCTGGAT 57.557 36.000 9.42 9.42 0.00 3.41
94 95 6.874278 TCAAATTCTAGACTTGATCCTGGA 57.126 37.500 10.95 0.00 0.00 3.86
95 96 7.992033 AGATTCAAATTCTAGACTTGATCCTGG 59.008 37.037 14.35 0.00 0.00 4.45
96 97 8.961294 AGATTCAAATTCTAGACTTGATCCTG 57.039 34.615 14.35 2.36 0.00 3.86
97 98 9.393512 CAAGATTCAAATTCTAGACTTGATCCT 57.606 33.333 14.35 11.87 36.59 3.24
98 99 8.619546 CCAAGATTCAAATTCTAGACTTGATCC 58.380 37.037 14.35 10.40 36.59 3.36
99 100 9.171877 ACCAAGATTCAAATTCTAGACTTGATC 57.828 33.333 14.35 13.26 36.59 2.92
100 101 8.954350 CACCAAGATTCAAATTCTAGACTTGAT 58.046 33.333 14.35 7.43 36.59 2.57
101 102 7.391554 CCACCAAGATTCAAATTCTAGACTTGA 59.608 37.037 13.97 12.51 36.59 3.02
105 106 5.163612 GCCCACCAAGATTCAAATTCTAGAC 60.164 44.000 0.00 0.00 0.00 2.59
147 148 2.253610 ACCTGTGGTTCGATGGTTAGA 58.746 47.619 0.00 0.00 27.29 2.10
257 258 5.583854 CCTCCACTCATTGATTTGTACTGAG 59.416 44.000 4.89 4.89 39.35 3.35
300 301 2.550487 GCATGTTTGCCTACACCGA 58.450 52.632 0.00 0.00 43.38 4.69
414 415 4.261801 ACGTCCCTCCTGTCATTATTTTG 58.738 43.478 0.00 0.00 0.00 2.44
419 420 3.670625 CAAAACGTCCCTCCTGTCATTA 58.329 45.455 0.00 0.00 0.00 1.90
425 426 0.537371 AAGGCAAAACGTCCCTCCTG 60.537 55.000 0.00 0.00 0.00 3.86
426 427 0.185175 AAAGGCAAAACGTCCCTCCT 59.815 50.000 0.00 0.00 0.00 3.69
451 519 7.177216 ACATAACCAACATCAATCTTCACACAT 59.823 33.333 0.00 0.00 0.00 3.21
461 529 6.534475 AAGATGCACATAACCAACATCAAT 57.466 33.333 0.00 0.00 39.64 2.57
465 533 8.623903 CATAGTTAAGATGCACATAACCAACAT 58.376 33.333 12.14 0.00 34.47 2.71
479 547 4.063689 CTGGCCTCTGCATAGTTAAGATG 58.936 47.826 3.32 0.00 40.13 2.90
480 548 3.969976 TCTGGCCTCTGCATAGTTAAGAT 59.030 43.478 3.32 0.00 40.13 2.40
482 550 3.827008 TCTGGCCTCTGCATAGTTAAG 57.173 47.619 3.32 0.00 40.13 1.85
484 552 6.669591 ACATATATCTGGCCTCTGCATAGTTA 59.330 38.462 3.32 0.00 40.13 2.24
485 553 5.486775 ACATATATCTGGCCTCTGCATAGTT 59.513 40.000 3.32 0.00 40.13 2.24
486 554 5.028802 ACATATATCTGGCCTCTGCATAGT 58.971 41.667 3.32 0.00 40.13 2.12
487 555 5.611128 ACATATATCTGGCCTCTGCATAG 57.389 43.478 3.32 0.00 40.13 2.23
488 556 6.378661 AAACATATATCTGGCCTCTGCATA 57.621 37.500 3.32 0.00 40.13 3.14
490 558 4.712051 AAACATATATCTGGCCTCTGCA 57.288 40.909 3.32 0.00 40.13 4.41
491 559 7.693969 AAATAAACATATATCTGGCCTCTGC 57.306 36.000 3.32 0.00 0.00 4.26
492 560 9.288576 TCAAAATAAACATATATCTGGCCTCTG 57.711 33.333 3.32 0.00 0.00 3.35
494 562 9.289782 AGTCAAAATAAACATATATCTGGCCTC 57.710 33.333 3.32 0.00 0.00 4.70
495 563 9.071276 CAGTCAAAATAAACATATATCTGGCCT 57.929 33.333 3.32 0.00 0.00 5.19
496 564 8.850156 ACAGTCAAAATAAACATATATCTGGCC 58.150 33.333 0.00 0.00 0.00 5.36
592 1429 1.830408 CCTTTGTTTGGCGGGGTCA 60.830 57.895 0.00 0.00 0.00 4.02
689 1533 2.743928 GTCAGCGTGCCCTTCAGG 60.744 66.667 0.00 0.00 39.47 3.86
690 1534 2.031012 TGTCAGCGTGCCCTTCAG 59.969 61.111 0.00 0.00 0.00 3.02
693 1537 0.108138 GTATCTGTCAGCGTGCCCTT 60.108 55.000 0.00 0.00 0.00 3.95
696 1540 1.424493 GCAGTATCTGTCAGCGTGCC 61.424 60.000 0.00 0.00 33.43 5.01
736 1588 5.986135 ACGTACTAGGTAGGATAACACGTAG 59.014 44.000 0.00 0.00 38.22 3.51
737 1589 5.753438 CACGTACTAGGTAGGATAACACGTA 59.247 44.000 0.00 0.00 37.95 3.57
738 1590 4.572389 CACGTACTAGGTAGGATAACACGT 59.428 45.833 0.00 0.00 40.37 4.49
739 1591 4.572389 ACACGTACTAGGTAGGATAACACG 59.428 45.833 0.00 0.00 0.00 4.49
740 1592 6.442513 AACACGTACTAGGTAGGATAACAC 57.557 41.667 0.00 0.00 0.00 3.32
741 1593 7.445402 GGATAACACGTACTAGGTAGGATAACA 59.555 40.741 0.00 0.00 0.00 2.41
742 1594 7.663493 AGGATAACACGTACTAGGTAGGATAAC 59.337 40.741 0.00 0.00 0.00 1.89
743 1595 7.749666 AGGATAACACGTACTAGGTAGGATAA 58.250 38.462 0.00 0.00 0.00 1.75
744 1596 7.321717 AGGATAACACGTACTAGGTAGGATA 57.678 40.000 0.00 0.00 0.00 2.59
745 1597 6.198237 AGGATAACACGTACTAGGTAGGAT 57.802 41.667 0.00 0.00 0.00 3.24
746 1598 5.636903 AGGATAACACGTACTAGGTAGGA 57.363 43.478 0.00 0.00 0.00 2.94
747 1599 5.406780 CGTAGGATAACACGTACTAGGTAGG 59.593 48.000 0.00 0.00 33.56 3.18
748 1600 5.107298 GCGTAGGATAACACGTACTAGGTAG 60.107 48.000 0.00 0.00 40.25 3.18
749 1601 4.750098 GCGTAGGATAACACGTACTAGGTA 59.250 45.833 0.00 0.00 40.25 3.08
750 1602 3.561725 GCGTAGGATAACACGTACTAGGT 59.438 47.826 0.00 0.00 40.25 3.08
751 1603 3.561310 TGCGTAGGATAACACGTACTAGG 59.439 47.826 0.00 0.00 40.25 3.02
752 1604 4.770287 CTGCGTAGGATAACACGTACTAG 58.230 47.826 0.00 0.00 40.25 2.57
753 1605 4.801147 CTGCGTAGGATAACACGTACTA 57.199 45.455 0.00 0.00 40.25 1.82
754 1606 3.687572 CTGCGTAGGATAACACGTACT 57.312 47.619 0.00 0.00 40.25 2.73
816 1683 4.865365 CGGACTCTGTTTTCTGGATAAGAC 59.135 45.833 0.00 0.00 33.46 3.01
825 1692 0.250338 GGTGGCGGACTCTGTTTTCT 60.250 55.000 0.00 0.00 0.00 2.52
827 1694 0.535102 CAGGTGGCGGACTCTGTTTT 60.535 55.000 0.00 0.00 0.00 2.43
828 1695 1.071471 CAGGTGGCGGACTCTGTTT 59.929 57.895 0.00 0.00 0.00 2.83
829 1696 2.140792 ACAGGTGGCGGACTCTGTT 61.141 57.895 4.92 0.00 34.33 3.16
830 1697 2.524394 ACAGGTGGCGGACTCTGT 60.524 61.111 4.92 4.92 33.62 3.41
886 1753 1.949257 CAGGCAAGACCGTGGTTTC 59.051 57.895 0.00 0.00 46.52 2.78
902 1769 0.179073 CCTGATACGGTGGGAAGCAG 60.179 60.000 0.00 0.00 0.00 4.24
1082 2004 0.813184 GGGTCACCGTCGACATCTTA 59.187 55.000 17.16 0.00 37.66 2.10
1176 2117 3.247648 AGAGCAGTGCTGGGCTGT 61.248 61.111 25.35 0.00 39.88 4.40
1205 3570 0.899720 AAGCTGCAATGGATGGTTGG 59.100 50.000 1.02 0.00 0.00 3.77
1268 3711 1.155042 CAGCCTCTGCAGTTTCAGAC 58.845 55.000 14.67 0.00 38.11 3.51
1383 3868 3.181517 CGCGTTGATTCATGAGATGTGTT 60.182 43.478 0.00 0.00 0.00 3.32
1387 3872 3.663464 AACGCGTTGATTCATGAGATG 57.337 42.857 26.00 0.00 0.00 2.90
1399 3886 1.774639 ACAGTACAGGTAACGCGTTG 58.225 50.000 33.40 20.35 46.39 4.10
1400 3887 3.641437 TTACAGTACAGGTAACGCGTT 57.359 42.857 29.27 29.27 46.39 4.84
1401 3888 3.855689 ATTACAGTACAGGTAACGCGT 57.144 42.857 5.58 5.58 46.39 6.01
1402 3889 4.622313 TGAAATTACAGTACAGGTAACGCG 59.378 41.667 3.53 3.53 46.39 6.01
1403 3890 5.445540 GCTGAAATTACAGTACAGGTAACGC 60.446 44.000 11.02 6.88 40.07 4.84
1404 3891 5.867716 AGCTGAAATTACAGTACAGGTAACG 59.132 40.000 11.02 0.00 40.07 3.18
1405 3892 6.092259 CCAGCTGAAATTACAGTACAGGTAAC 59.908 42.308 17.39 2.49 39.73 2.50
1406 3893 6.170506 CCAGCTGAAATTACAGTACAGGTAA 58.829 40.000 17.39 11.15 39.73 2.85
1407 3894 5.730550 CCAGCTGAAATTACAGTACAGGTA 58.269 41.667 17.39 0.00 39.73 3.08
1408 3895 4.579869 CCAGCTGAAATTACAGTACAGGT 58.420 43.478 17.39 0.00 39.73 4.00
1409 3896 3.375299 GCCAGCTGAAATTACAGTACAGG 59.625 47.826 17.39 0.00 39.73 4.00
1410 3897 3.062639 CGCCAGCTGAAATTACAGTACAG 59.937 47.826 17.39 0.00 39.73 2.74
1411 3898 3.000041 CGCCAGCTGAAATTACAGTACA 59.000 45.455 17.39 0.00 39.73 2.90
1412 3899 3.259064 TCGCCAGCTGAAATTACAGTAC 58.741 45.455 17.39 0.00 39.73 2.73
1413 3900 3.521560 CTCGCCAGCTGAAATTACAGTA 58.478 45.455 17.39 0.00 39.73 2.74
1414 3901 2.350522 CTCGCCAGCTGAAATTACAGT 58.649 47.619 17.39 0.00 39.73 3.55
1646 4141 8.803235 TCTCGCTGAACATTATAGTACCATTAT 58.197 33.333 0.00 0.00 0.00 1.28
1742 5199 4.324563 GGAAAGATGACAAGATCCCTGGAA 60.325 45.833 0.00 0.00 0.00 3.53
1743 5200 3.200825 GGAAAGATGACAAGATCCCTGGA 59.799 47.826 0.00 0.00 0.00 3.86
1744 5201 3.054139 TGGAAAGATGACAAGATCCCTGG 60.054 47.826 0.00 0.00 0.00 4.45
1745 5202 4.197750 CTGGAAAGATGACAAGATCCCTG 58.802 47.826 0.00 0.00 0.00 4.45
1746 5203 3.201708 CCTGGAAAGATGACAAGATCCCT 59.798 47.826 0.00 0.00 0.00 4.20
1749 5206 4.494091 TCCCTGGAAAGATGACAAGATC 57.506 45.455 0.00 0.00 0.00 2.75
1852 5319 3.548818 GGTCTTGACGCATATCAAATGGC 60.549 47.826 0.00 0.00 38.12 4.40
1861 5328 2.488937 TGTTACTCGGTCTTGACGCATA 59.511 45.455 0.00 0.00 0.00 3.14
1870 5337 6.293004 ACTAGTACTAGTGTTACTCGGTCT 57.707 41.667 30.33 5.05 44.11 3.85
1871 5338 7.262048 ACTACTAGTACTAGTGTTACTCGGTC 58.738 42.308 35.52 0.00 45.25 4.79
1872 5339 7.176589 ACTACTAGTACTAGTGTTACTCGGT 57.823 40.000 35.52 20.42 45.25 4.69
1873 5340 8.625651 TCTACTACTAGTACTAGTGTTACTCGG 58.374 40.741 35.52 20.18 45.25 4.63
1896 5363 8.861086 GGATCCAATGAATGAAGTAGTAGTCTA 58.139 37.037 6.95 0.00 0.00 2.59
1898 5365 6.931840 GGGATCCAATGAATGAAGTAGTAGTC 59.068 42.308 15.23 0.00 0.00 2.59
1899 5366 6.183361 GGGGATCCAATGAATGAAGTAGTAGT 60.183 42.308 15.23 0.00 0.00 2.73
1901 5368 5.911178 AGGGGATCCAATGAATGAAGTAGTA 59.089 40.000 15.23 0.00 34.83 1.82
1902 5369 4.728860 AGGGGATCCAATGAATGAAGTAGT 59.271 41.667 15.23 0.00 34.83 2.73
1903 5370 5.316158 AGGGGATCCAATGAATGAAGTAG 57.684 43.478 15.23 0.00 34.83 2.57
1904 5371 5.911178 AGTAGGGGATCCAATGAATGAAGTA 59.089 40.000 15.23 0.00 34.83 2.24
1905 5372 4.728860 AGTAGGGGATCCAATGAATGAAGT 59.271 41.667 15.23 0.00 34.83 3.01
1907 5374 5.911178 AGTAGTAGGGGATCCAATGAATGAA 59.089 40.000 15.23 0.00 34.83 2.57
1908 5375 5.476983 AGTAGTAGGGGATCCAATGAATGA 58.523 41.667 15.23 0.00 34.83 2.57
1910 5377 5.731924 AGAGTAGTAGGGGATCCAATGAAT 58.268 41.667 15.23 0.00 34.83 2.57
1911 5378 5.148502 GAGAGTAGTAGGGGATCCAATGAA 58.851 45.833 15.23 0.00 34.83 2.57
1912 5379 4.449376 GGAGAGTAGTAGGGGATCCAATGA 60.449 50.000 15.23 0.00 34.83 2.57
1913 5380 3.835395 GGAGAGTAGTAGGGGATCCAATG 59.165 52.174 15.23 0.00 34.83 2.82
1915 5382 3.140143 AGGAGAGTAGTAGGGGATCCAA 58.860 50.000 15.23 0.00 34.83 3.53
1916 5383 2.717515 GAGGAGAGTAGTAGGGGATCCA 59.282 54.545 15.23 0.00 34.83 3.41
1918 5385 3.914435 AGAGAGGAGAGTAGTAGGGGATC 59.086 52.174 0.00 0.00 0.00 3.36
1919 5386 3.962559 AGAGAGGAGAGTAGTAGGGGAT 58.037 50.000 0.00 0.00 0.00 3.85
1920 5387 3.441505 AGAGAGGAGAGTAGTAGGGGA 57.558 52.381 0.00 0.00 0.00 4.81
1923 5390 6.296259 GGGATAGAAGAGAGGAGAGTAGTAGG 60.296 50.000 0.00 0.00 0.00 3.18
1924 5391 6.573680 CGGGATAGAAGAGAGGAGAGTAGTAG 60.574 50.000 0.00 0.00 0.00 2.57
1925 5392 5.246656 CGGGATAGAAGAGAGGAGAGTAGTA 59.753 48.000 0.00 0.00 0.00 1.82
1926 5393 4.041198 CGGGATAGAAGAGAGGAGAGTAGT 59.959 50.000 0.00 0.00 0.00 2.73
1927 5394 4.285003 TCGGGATAGAAGAGAGGAGAGTAG 59.715 50.000 0.00 0.00 0.00 2.57
1929 5396 3.050089 TCGGGATAGAAGAGAGGAGAGT 58.950 50.000 0.00 0.00 0.00 3.24
1930 5397 3.780804 TCGGGATAGAAGAGAGGAGAG 57.219 52.381 0.00 0.00 0.00 3.20
1931 5398 4.521536 TTTCGGGATAGAAGAGAGGAGA 57.478 45.455 0.00 0.00 0.00 3.71
1932 5399 4.560513 GCATTTCGGGATAGAAGAGAGGAG 60.561 50.000 0.00 0.00 0.00 3.69
1933 5400 3.322254 GCATTTCGGGATAGAAGAGAGGA 59.678 47.826 0.00 0.00 0.00 3.71
1934 5401 3.070159 TGCATTTCGGGATAGAAGAGAGG 59.930 47.826 0.00 0.00 0.00 3.69
1935 5402 4.054671 GTGCATTTCGGGATAGAAGAGAG 58.945 47.826 0.00 0.00 0.00 3.20
1936 5403 3.490933 CGTGCATTTCGGGATAGAAGAGA 60.491 47.826 0.00 0.00 0.00 3.10
1937 5404 2.797156 CGTGCATTTCGGGATAGAAGAG 59.203 50.000 0.00 0.00 0.00 2.85
1938 5405 2.167693 ACGTGCATTTCGGGATAGAAGA 59.832 45.455 0.00 0.00 0.00 2.87
1939 5406 2.285220 CACGTGCATTTCGGGATAGAAG 59.715 50.000 0.82 0.00 33.17 2.85
1940 5407 2.276201 CACGTGCATTTCGGGATAGAA 58.724 47.619 0.82 0.00 33.17 2.10
1941 5408 1.472552 CCACGTGCATTTCGGGATAGA 60.473 52.381 10.91 0.00 33.17 1.98
1942 5409 0.937304 CCACGTGCATTTCGGGATAG 59.063 55.000 10.91 0.00 33.17 2.08
1943 5410 0.462937 CCCACGTGCATTTCGGGATA 60.463 55.000 10.91 0.00 39.44 2.59
1944 5411 1.748879 CCCACGTGCATTTCGGGAT 60.749 57.895 10.91 0.00 39.44 3.85
1945 5412 2.359354 CCCACGTGCATTTCGGGA 60.359 61.111 10.91 0.00 39.44 5.14
1946 5413 3.439540 CCCCACGTGCATTTCGGG 61.440 66.667 10.91 10.60 36.59 5.14
1947 5414 1.714899 GATCCCCACGTGCATTTCGG 61.715 60.000 10.91 4.52 0.00 4.30
1948 5415 1.024046 TGATCCCCACGTGCATTTCG 61.024 55.000 10.91 0.00 0.00 3.46
1949 5416 1.066002 CATGATCCCCACGTGCATTTC 59.934 52.381 10.91 5.00 0.00 2.17
1950 5417 1.105457 CATGATCCCCACGTGCATTT 58.895 50.000 10.91 0.00 0.00 2.32
1951 5418 1.386525 GCATGATCCCCACGTGCATT 61.387 55.000 10.91 0.00 45.83 3.56
1952 5419 1.825191 GCATGATCCCCACGTGCAT 60.825 57.895 10.91 4.82 45.83 3.96
1953 5420 2.438254 GCATGATCCCCACGTGCA 60.438 61.111 10.91 2.17 45.83 4.57
1954 5421 3.211963 GGCATGATCCCCACGTGC 61.212 66.667 10.91 0.00 45.82 5.34
1955 5422 2.114670 GTGGCATGATCCCCACGTG 61.115 63.158 9.08 9.08 41.75 4.49
1956 5423 2.272146 GTGGCATGATCCCCACGT 59.728 61.111 10.38 0.00 41.75 4.49
1959 5426 1.619057 TCAGGTGGCATGATCCCCA 60.619 57.895 0.00 0.00 0.00 4.96
1960 5427 1.152881 GTCAGGTGGCATGATCCCC 60.153 63.158 0.00 0.00 0.00 4.81
1961 5428 1.152881 GGTCAGGTGGCATGATCCC 60.153 63.158 0.00 0.00 0.00 3.85
1962 5429 0.179034 GAGGTCAGGTGGCATGATCC 60.179 60.000 0.00 0.00 0.00 3.36
1963 5430 0.543277 TGAGGTCAGGTGGCATGATC 59.457 55.000 0.00 0.00 0.00 2.92
1964 5431 0.254178 GTGAGGTCAGGTGGCATGAT 59.746 55.000 0.00 0.00 0.00 2.45
1965 5432 1.126948 TGTGAGGTCAGGTGGCATGA 61.127 55.000 0.00 0.00 0.00 3.07
1966 5433 0.957395 GTGTGAGGTCAGGTGGCATG 60.957 60.000 0.00 0.00 0.00 4.06
1967 5434 1.130054 AGTGTGAGGTCAGGTGGCAT 61.130 55.000 0.00 0.00 0.00 4.40
1968 5435 0.471022 TAGTGTGAGGTCAGGTGGCA 60.471 55.000 0.00 0.00 0.00 4.92
1969 5436 0.905357 ATAGTGTGAGGTCAGGTGGC 59.095 55.000 0.00 0.00 0.00 5.01
1970 5437 4.819105 TTTATAGTGTGAGGTCAGGTGG 57.181 45.455 0.00 0.00 0.00 4.61
1971 5438 6.227298 AGATTTATAGTGTGAGGTCAGGTG 57.773 41.667 0.00 0.00 0.00 4.00
1972 5439 6.875972 AAGATTTATAGTGTGAGGTCAGGT 57.124 37.500 0.00 0.00 0.00 4.00
1973 5440 7.824289 TCAAAAGATTTATAGTGTGAGGTCAGG 59.176 37.037 0.00 0.00 0.00 3.86
1974 5441 8.777865 TCAAAAGATTTATAGTGTGAGGTCAG 57.222 34.615 0.00 0.00 0.00 3.51
1975 5442 7.824289 CCTCAAAAGATTTATAGTGTGAGGTCA 59.176 37.037 7.98 0.00 43.84 4.02
1976 5443 7.281100 CCCTCAAAAGATTTATAGTGTGAGGTC 59.719 40.741 13.69 0.00 46.23 3.85
1977 5444 7.037586 TCCCTCAAAAGATTTATAGTGTGAGGT 60.038 37.037 13.69 0.00 46.23 3.85
1978 5445 7.338710 TCCCTCAAAAGATTTATAGTGTGAGG 58.661 38.462 9.01 9.01 46.88 3.86
1979 5446 8.260818 TCTCCCTCAAAAGATTTATAGTGTGAG 58.739 37.037 0.00 0.00 0.00 3.51
1980 5447 8.146053 TCTCCCTCAAAAGATTTATAGTGTGA 57.854 34.615 0.00 0.00 0.00 3.58
1981 5448 8.834465 CATCTCCCTCAAAAGATTTATAGTGTG 58.166 37.037 0.00 0.00 29.77 3.82
1982 5449 8.772250 TCATCTCCCTCAAAAGATTTATAGTGT 58.228 33.333 0.00 0.00 29.77 3.55
1983 5450 9.790344 ATCATCTCCCTCAAAAGATTTATAGTG 57.210 33.333 0.00 0.00 29.77 2.74
1986 5453 9.578576 CCAATCATCTCCCTCAAAAGATTTATA 57.421 33.333 0.00 0.00 29.77 0.98
1987 5454 8.063770 ACCAATCATCTCCCTCAAAAGATTTAT 58.936 33.333 0.00 0.00 29.77 1.40
1988 5455 7.413446 ACCAATCATCTCCCTCAAAAGATTTA 58.587 34.615 0.00 0.00 29.77 1.40
1989 5456 6.259123 ACCAATCATCTCCCTCAAAAGATTT 58.741 36.000 0.00 0.00 29.77 2.17
1990 5457 5.835582 ACCAATCATCTCCCTCAAAAGATT 58.164 37.500 0.00 0.00 29.77 2.40
1991 5458 5.463051 ACCAATCATCTCCCTCAAAAGAT 57.537 39.130 0.00 0.00 32.44 2.40
1992 5459 4.934797 ACCAATCATCTCCCTCAAAAGA 57.065 40.909 0.00 0.00 0.00 2.52
1993 5460 5.990120 AAACCAATCATCTCCCTCAAAAG 57.010 39.130 0.00 0.00 0.00 2.27
1994 5461 6.127366 GCATAAACCAATCATCTCCCTCAAAA 60.127 38.462 0.00 0.00 0.00 2.44
1995 5462 5.360714 GCATAAACCAATCATCTCCCTCAAA 59.639 40.000 0.00 0.00 0.00 2.69
1996 5463 4.889409 GCATAAACCAATCATCTCCCTCAA 59.111 41.667 0.00 0.00 0.00 3.02
1997 5464 4.464008 GCATAAACCAATCATCTCCCTCA 58.536 43.478 0.00 0.00 0.00 3.86
1998 5465 3.823304 GGCATAAACCAATCATCTCCCTC 59.177 47.826 0.00 0.00 0.00 4.30
1999 5466 3.748668 CGGCATAAACCAATCATCTCCCT 60.749 47.826 0.00 0.00 0.00 4.20
2000 5467 2.554032 CGGCATAAACCAATCATCTCCC 59.446 50.000 0.00 0.00 0.00 4.30
2001 5468 2.554032 CCGGCATAAACCAATCATCTCC 59.446 50.000 0.00 0.00 0.00 3.71
2002 5469 2.030805 GCCGGCATAAACCAATCATCTC 60.031 50.000 24.80 0.00 0.00 2.75
2003 5470 1.956477 GCCGGCATAAACCAATCATCT 59.044 47.619 24.80 0.00 0.00 2.90
2004 5471 1.334960 CGCCGGCATAAACCAATCATC 60.335 52.381 28.98 0.00 0.00 2.92
2005 5472 0.667993 CGCCGGCATAAACCAATCAT 59.332 50.000 28.98 0.00 0.00 2.45
2006 5473 1.380403 CCGCCGGCATAAACCAATCA 61.380 55.000 28.98 0.00 0.00 2.57
2007 5474 1.098712 TCCGCCGGCATAAACCAATC 61.099 55.000 28.98 0.00 0.00 2.67
2008 5475 0.467290 ATCCGCCGGCATAAACCAAT 60.467 50.000 28.98 4.17 0.00 3.16
2009 5476 1.077357 ATCCGCCGGCATAAACCAA 60.077 52.632 28.98 1.66 0.00 3.67
2010 5477 1.525077 GATCCGCCGGCATAAACCA 60.525 57.895 28.98 0.89 0.00 3.67
2011 5478 1.227853 AGATCCGCCGGCATAAACC 60.228 57.895 28.98 9.82 0.00 3.27
2012 5479 0.531974 TGAGATCCGCCGGCATAAAC 60.532 55.000 28.98 13.13 0.00 2.01
2013 5480 0.396435 ATGAGATCCGCCGGCATAAA 59.604 50.000 28.98 8.51 0.00 1.40
2014 5481 0.320683 CATGAGATCCGCCGGCATAA 60.321 55.000 28.98 11.43 0.00 1.90
2015 5482 1.293179 CATGAGATCCGCCGGCATA 59.707 57.895 28.98 14.42 0.00 3.14
2016 5483 2.031616 CATGAGATCCGCCGGCAT 59.968 61.111 28.98 13.97 0.00 4.40
2017 5484 4.916293 GCATGAGATCCGCCGGCA 62.916 66.667 28.98 8.41 0.00 5.69
2019 5486 4.284860 TCGCATGAGATCCGCCGG 62.285 66.667 0.00 0.00 0.00 6.13
2020 5487 2.732468 CTCGCATGAGATCCGCCG 60.732 66.667 0.00 0.00 45.57 6.46
2021 5488 2.356793 CCTCGCATGAGATCCGCC 60.357 66.667 0.00 0.00 45.57 6.13
2022 5489 3.040763 GCCTCGCATGAGATCCGC 61.041 66.667 0.00 0.00 45.57 5.54
2023 5490 2.732468 CGCCTCGCATGAGATCCG 60.732 66.667 0.00 2.15 45.57 4.18
2024 5491 1.663074 GACGCCTCGCATGAGATCC 60.663 63.158 0.00 0.00 45.57 3.36
2025 5492 1.663074 GGACGCCTCGCATGAGATC 60.663 63.158 0.00 0.00 45.57 2.75
2026 5493 2.419198 GGACGCCTCGCATGAGAT 59.581 61.111 0.00 0.00 45.57 2.75
2027 5494 3.838271 GGGACGCCTCGCATGAGA 61.838 66.667 0.00 0.00 45.57 3.27
2028 5495 3.781770 GAGGGACGCCTCGCATGAG 62.782 68.421 0.00 0.00 42.18 2.90
2029 5496 3.838271 GAGGGACGCCTCGCATGA 61.838 66.667 0.00 0.00 0.00 3.07
2030 5497 4.147449 TGAGGGACGCCTCGCATG 62.147 66.667 4.84 0.00 39.49 4.06
2031 5498 4.148825 GTGAGGGACGCCTCGCAT 62.149 66.667 15.32 0.00 44.10 4.73
2038 5505 0.321996 AAGAAAGAGGTGAGGGACGC 59.678 55.000 0.00 0.00 0.00 5.19
2039 5506 1.344763 ACAAGAAAGAGGTGAGGGACG 59.655 52.381 0.00 0.00 0.00 4.79
2040 5507 2.368875 TCACAAGAAAGAGGTGAGGGAC 59.631 50.000 0.00 0.00 36.69 4.46
2041 5508 2.368875 GTCACAAGAAAGAGGTGAGGGA 59.631 50.000 0.00 0.00 41.76 4.20
2042 5509 2.104792 TGTCACAAGAAAGAGGTGAGGG 59.895 50.000 0.00 0.00 41.76 4.30
2043 5510 3.134458 GTGTCACAAGAAAGAGGTGAGG 58.866 50.000 0.00 0.00 41.76 3.86
2044 5511 2.797156 CGTGTCACAAGAAAGAGGTGAG 59.203 50.000 3.42 0.00 41.76 3.51
2045 5512 2.167693 ACGTGTCACAAGAAAGAGGTGA 59.832 45.455 3.42 0.00 39.09 4.02
2046 5513 2.285220 CACGTGTCACAAGAAAGAGGTG 59.715 50.000 7.58 0.00 0.00 4.00
2047 5514 2.093658 ACACGTGTCACAAGAAAGAGGT 60.094 45.455 17.22 0.00 0.00 3.85
2048 5515 2.540101 GACACGTGTCACAAGAAAGAGG 59.460 50.000 37.16 0.11 44.18 3.69
2049 5516 3.843426 GACACGTGTCACAAGAAAGAG 57.157 47.619 37.16 0.80 44.18 2.85
2060 5527 0.034896 ATGGACCCAAGACACGTGTC 59.965 55.000 35.83 35.83 45.08 3.67
2061 5528 0.034896 GATGGACCCAAGACACGTGT 59.965 55.000 23.64 23.64 0.00 4.49
2062 5529 0.321671 AGATGGACCCAAGACACGTG 59.678 55.000 15.48 15.48 0.00 4.49
2063 5530 1.825474 CTAGATGGACCCAAGACACGT 59.175 52.381 0.00 0.00 0.00 4.49
2064 5531 1.825474 ACTAGATGGACCCAAGACACG 59.175 52.381 0.00 0.00 0.00 4.49
2065 5532 4.024670 AGTACTAGATGGACCCAAGACAC 58.975 47.826 0.00 0.00 0.00 3.67
2066 5533 4.332683 AGTACTAGATGGACCCAAGACA 57.667 45.455 0.00 0.00 0.00 3.41
2067 5534 6.980416 AATAGTACTAGATGGACCCAAGAC 57.020 41.667 8.85 0.00 0.00 3.01
2068 5535 7.363031 AGAAATAGTACTAGATGGACCCAAGA 58.637 38.462 8.85 0.00 0.00 3.02
2069 5536 7.604657 AGAAATAGTACTAGATGGACCCAAG 57.395 40.000 8.85 0.00 0.00 3.61
2070 5537 7.232941 GCTAGAAATAGTACTAGATGGACCCAA 59.767 40.741 8.85 0.00 38.53 4.12
2071 5538 6.720288 GCTAGAAATAGTACTAGATGGACCCA 59.280 42.308 8.85 0.00 38.53 4.51
2072 5539 6.127952 CGCTAGAAATAGTACTAGATGGACCC 60.128 46.154 8.85 0.00 38.53 4.46
2073 5540 6.127952 CCGCTAGAAATAGTACTAGATGGACC 60.128 46.154 8.85 0.00 38.53 4.46
2074 5541 6.430616 ACCGCTAGAAATAGTACTAGATGGAC 59.569 42.308 8.85 0.00 38.53 4.02
2075 5542 6.540995 ACCGCTAGAAATAGTACTAGATGGA 58.459 40.000 8.85 0.00 38.53 3.41
2076 5543 6.821031 ACCGCTAGAAATAGTACTAGATGG 57.179 41.667 8.85 0.00 38.53 3.51
2077 5544 7.306953 GGAACCGCTAGAAATAGTACTAGATG 58.693 42.308 8.85 0.00 38.53 2.90
2078 5545 6.149142 CGGAACCGCTAGAAATAGTACTAGAT 59.851 42.308 8.85 0.00 38.53 1.98
2079 5546 5.468072 CGGAACCGCTAGAAATAGTACTAGA 59.532 44.000 8.85 0.00 38.53 2.43
2080 5547 5.238214 ACGGAACCGCTAGAAATAGTACTAG 59.762 44.000 13.32 0.00 44.19 2.57
2081 5548 5.008019 CACGGAACCGCTAGAAATAGTACTA 59.992 44.000 13.32 4.77 44.19 1.82
2082 5549 3.950395 ACGGAACCGCTAGAAATAGTACT 59.050 43.478 13.32 0.00 44.19 2.73
2083 5550 4.040376 CACGGAACCGCTAGAAATAGTAC 58.960 47.826 13.32 0.00 44.19 2.73
2084 5551 3.489738 GCACGGAACCGCTAGAAATAGTA 60.490 47.826 13.32 0.00 44.19 1.82
2085 5552 2.737679 GCACGGAACCGCTAGAAATAGT 60.738 50.000 13.32 0.00 44.19 2.12
2086 5553 1.859080 GCACGGAACCGCTAGAAATAG 59.141 52.381 13.32 0.00 44.19 1.73
2087 5554 1.799917 CGCACGGAACCGCTAGAAATA 60.800 52.381 13.32 0.00 44.19 1.40
2088 5555 1.082117 CGCACGGAACCGCTAGAAAT 61.082 55.000 13.32 0.00 44.19 2.17
2089 5556 1.735198 CGCACGGAACCGCTAGAAA 60.735 57.895 13.32 0.00 44.19 2.52
2090 5557 1.940883 ATCGCACGGAACCGCTAGAA 61.941 55.000 13.32 0.00 44.19 2.10
2091 5558 2.332362 GATCGCACGGAACCGCTAGA 62.332 60.000 13.32 9.85 44.19 2.43
2092 5559 1.944676 GATCGCACGGAACCGCTAG 60.945 63.158 13.32 5.02 44.19 3.42
2093 5560 2.011741 ATGATCGCACGGAACCGCTA 62.012 55.000 13.32 0.00 44.19 4.26
2094 5561 3.371097 ATGATCGCACGGAACCGCT 62.371 57.895 13.32 0.00 44.19 5.52
2095 5562 2.890474 ATGATCGCACGGAACCGC 60.890 61.111 13.32 0.00 44.19 5.68
2096 5563 1.809619 ACATGATCGCACGGAACCG 60.810 57.895 11.83 11.83 46.03 4.44
2097 5564 1.715585 CACATGATCGCACGGAACC 59.284 57.895 0.00 0.00 0.00 3.62
2098 5565 1.060937 GCACATGATCGCACGGAAC 59.939 57.895 0.00 0.00 0.00 3.62
2099 5566 2.451990 CGCACATGATCGCACGGAA 61.452 57.895 0.00 0.00 0.00 4.30
2100 5567 2.885164 CGCACATGATCGCACGGA 60.885 61.111 0.00 0.00 0.00 4.69
2101 5568 3.188100 ACGCACATGATCGCACGG 61.188 61.111 0.00 0.00 0.00 4.94
2102 5569 2.020423 CACGCACATGATCGCACG 59.980 61.111 0.00 0.00 0.00 5.34
2103 5570 1.225827 CACACGCACATGATCGCAC 60.226 57.895 0.00 0.00 0.00 5.34
2104 5571 2.389809 CCACACGCACATGATCGCA 61.390 57.895 0.00 0.00 0.00 5.10
2105 5572 2.400798 CCACACGCACATGATCGC 59.599 61.111 0.00 0.00 0.00 4.58
2106 5573 2.400798 GCCACACGCACATGATCG 59.599 61.111 0.00 4.66 37.47 3.69
2107 5574 2.400798 CGCCACACGCACATGATC 59.599 61.111 0.00 0.00 37.30 2.92
2108 5575 3.126879 CCGCCACACGCACATGAT 61.127 61.111 0.00 0.00 41.76 2.45
2109 5576 4.306967 TCCGCCACACGCACATGA 62.307 61.111 0.00 0.00 41.76 3.07
2110 5577 3.792047 CTCCGCCACACGCACATG 61.792 66.667 0.00 0.00 41.76 3.21
2111 5578 3.529341 TTCTCCGCCACACGCACAT 62.529 57.895 0.00 0.00 41.76 3.21
2112 5579 3.741830 TTTCTCCGCCACACGCACA 62.742 57.895 0.00 0.00 41.76 4.57
2113 5580 2.954753 CTTTCTCCGCCACACGCAC 61.955 63.158 0.00 0.00 41.76 5.34
2114 5581 2.664851 CTTTCTCCGCCACACGCA 60.665 61.111 0.00 0.00 41.76 5.24
2115 5582 2.171489 GAACTTTCTCCGCCACACGC 62.171 60.000 0.00 0.00 41.76 5.34
2116 5583 0.600255 AGAACTTTCTCCGCCACACG 60.600 55.000 0.00 0.00 43.15 4.49
2117 5584 1.149148 GAGAACTTTCTCCGCCACAC 58.851 55.000 7.65 0.00 46.20 3.82
2118 5585 3.606886 GAGAACTTTCTCCGCCACA 57.393 52.632 7.65 0.00 46.20 4.17
2125 5592 8.457261 ACAAATGATATTGCAGAGAACTTTCTC 58.543 33.333 10.51 10.51 42.40 2.87
2126 5593 8.242053 CACAAATGATATTGCAGAGAACTTTCT 58.758 33.333 0.00 0.00 35.47 2.52
2127 5594 8.025445 ACACAAATGATATTGCAGAGAACTTTC 58.975 33.333 0.00 0.00 33.52 2.62
2128 5595 7.889469 ACACAAATGATATTGCAGAGAACTTT 58.111 30.769 0.00 0.00 33.52 2.66
2129 5596 7.458409 ACACAAATGATATTGCAGAGAACTT 57.542 32.000 0.00 0.00 33.52 2.66
2130 5597 7.310664 CAACACAAATGATATTGCAGAGAACT 58.689 34.615 0.00 0.00 33.52 3.01
2131 5598 6.529125 CCAACACAAATGATATTGCAGAGAAC 59.471 38.462 0.00 0.00 33.52 3.01
2132 5599 6.350361 CCCAACACAAATGATATTGCAGAGAA 60.350 38.462 0.00 0.00 33.52 2.87
2133 5600 5.125900 CCCAACACAAATGATATTGCAGAGA 59.874 40.000 0.00 0.00 33.52 3.10
2134 5601 5.125900 TCCCAACACAAATGATATTGCAGAG 59.874 40.000 0.00 0.00 33.52 3.35
2135 5602 5.015515 TCCCAACACAAATGATATTGCAGA 58.984 37.500 0.00 0.00 33.52 4.26
2136 5603 5.327616 TCCCAACACAAATGATATTGCAG 57.672 39.130 0.00 0.00 33.52 4.41
2137 5604 5.936187 ATCCCAACACAAATGATATTGCA 57.064 34.783 0.00 0.00 33.52 4.08
2138 5605 9.410556 GTTATATCCCAACACAAATGATATTGC 57.589 33.333 0.00 0.00 32.48 3.56
2144 5611 9.130661 CCAATAGTTATATCCCAACACAAATGA 57.869 33.333 0.00 0.00 0.00 2.57
2145 5612 8.359642 CCCAATAGTTATATCCCAACACAAATG 58.640 37.037 0.00 0.00 0.00 2.32
2146 5613 8.065007 ACCCAATAGTTATATCCCAACACAAAT 58.935 33.333 0.00 0.00 0.00 2.32
2147 5614 7.415086 ACCCAATAGTTATATCCCAACACAAA 58.585 34.615 0.00 0.00 0.00 2.83
2148 5615 6.975949 ACCCAATAGTTATATCCCAACACAA 58.024 36.000 0.00 0.00 0.00 3.33
2149 5616 6.584471 ACCCAATAGTTATATCCCAACACA 57.416 37.500 0.00 0.00 0.00 3.72
2150 5617 8.380099 TCATACCCAATAGTTATATCCCAACAC 58.620 37.037 0.00 0.00 0.00 3.32
2151 5618 8.380099 GTCATACCCAATAGTTATATCCCAACA 58.620 37.037 0.00 0.00 0.00 3.33
2152 5619 7.827729 GGTCATACCCAATAGTTATATCCCAAC 59.172 40.741 0.00 0.00 30.04 3.77
2153 5620 7.517953 TGGTCATACCCAATAGTTATATCCCAA 59.482 37.037 0.00 0.00 37.50 4.12
2154 5621 7.026247 TGGTCATACCCAATAGTTATATCCCA 58.974 38.462 0.00 0.00 37.50 4.37
2155 5622 7.402071 TCTGGTCATACCCAATAGTTATATCCC 59.598 40.741 0.00 0.00 37.50 3.85
2179 5646 2.446036 GTATGACCGGGCCCCTCT 60.446 66.667 18.66 0.00 0.00 3.69
2215 5688 2.024414 GCTTCATAACCCGCCATCTTT 58.976 47.619 0.00 0.00 0.00 2.52
2242 5715 1.628846 TCTGGGTCTTAGGCCTTCAAC 59.371 52.381 12.58 6.56 0.00 3.18
2322 5795 1.203052 CCGGCTCGGTGACTAACTAAA 59.797 52.381 5.56 0.00 42.73 1.85
2426 5900 2.675348 CGATCTCTGGTTTCTTGCCTTC 59.325 50.000 0.00 0.00 0.00 3.46
2430 5904 3.238108 TCTCGATCTCTGGTTTCTTGC 57.762 47.619 0.00 0.00 0.00 4.01
2439 6218 4.497340 GCTTGACCTAGTTCTCGATCTCTG 60.497 50.000 0.00 0.00 0.00 3.35
2468 6247 1.065709 GGTTTCGATTACCAGGGAGCA 60.066 52.381 11.28 0.00 35.67 4.26
2594 6626 0.108138 GTGGAGCCATCGCAGTTAGT 60.108 55.000 0.00 0.00 37.52 2.24
2598 6630 2.046892 GTGTGGAGCCATCGCAGT 60.047 61.111 0.00 0.00 37.52 4.40
2663 7362 2.733858 GCGGAAGAAAGTTTGCAACACA 60.734 45.455 0.00 0.00 0.00 3.72
2664 7363 1.852280 GCGGAAGAAAGTTTGCAACAC 59.148 47.619 0.00 0.83 0.00 3.32
2665 7364 1.474478 TGCGGAAGAAAGTTTGCAACA 59.526 42.857 0.00 0.00 0.00 3.33
2666 7365 2.202295 TGCGGAAGAAAGTTTGCAAC 57.798 45.000 0.00 0.00 0.00 4.17
2667 7366 2.949451 TTGCGGAAGAAAGTTTGCAA 57.051 40.000 0.00 0.00 39.73 4.08
2668 7367 4.037446 AGTTATTGCGGAAGAAAGTTTGCA 59.963 37.500 0.00 0.00 27.47 4.08
2669 7368 4.546570 AGTTATTGCGGAAGAAAGTTTGC 58.453 39.130 0.00 0.00 27.47 3.68
2671 7370 5.763204 TGAGAGTTATTGCGGAAGAAAGTTT 59.237 36.000 0.00 0.00 27.47 2.66
2672 7371 5.305585 TGAGAGTTATTGCGGAAGAAAGTT 58.694 37.500 0.00 0.00 27.47 2.66
2674 7373 5.352569 ACATGAGAGTTATTGCGGAAGAAAG 59.647 40.000 0.00 0.00 27.47 2.62
2676 7375 4.832248 ACATGAGAGTTATTGCGGAAGAA 58.168 39.130 0.00 0.00 0.00 2.52
2678 7377 4.728882 GCAACATGAGAGTTATTGCGGAAG 60.729 45.833 0.00 0.00 36.63 3.46
2679 7378 3.126858 GCAACATGAGAGTTATTGCGGAA 59.873 43.478 0.00 0.00 36.63 4.30
2683 7382 6.768029 TTTTTGCAACATGAGAGTTATTGC 57.232 33.333 0.00 3.67 44.66 3.56
2730 9211 1.095228 CCGCCGGTAATGTTGCAGAT 61.095 55.000 1.90 0.00 0.00 2.90
2733 9214 1.302383 CTTCCGCCGGTAATGTTGCA 61.302 55.000 1.63 0.00 0.00 4.08
2735 9216 1.135803 CAACTTCCGCCGGTAATGTTG 60.136 52.381 1.63 10.43 0.00 3.33
2738 9219 1.427819 GCAACTTCCGCCGGTAATG 59.572 57.895 1.63 0.00 0.00 1.90
2739 9220 1.747745 GGCAACTTCCGCCGGTAAT 60.748 57.895 1.63 0.00 40.35 1.89
2749 9230 1.305930 GGTCGGACATGGGCAACTTC 61.306 60.000 10.76 0.00 0.00 3.01
2750 9231 1.303317 GGTCGGACATGGGCAACTT 60.303 57.895 10.76 0.00 0.00 2.66
2751 9232 1.852157 ATGGTCGGACATGGGCAACT 61.852 55.000 10.76 0.00 0.00 3.16
2759 9240 4.856801 GGCGGCATGGTCGGACAT 62.857 66.667 10.76 0.00 0.00 3.06
2775 9256 3.573489 GAAACTTGTCGGCGTGCGG 62.573 63.158 6.85 0.00 0.00 5.69
2777 9258 0.163146 GTAGAAACTTGTCGGCGTGC 59.837 55.000 6.85 1.63 0.00 5.34
2778 9259 1.493772 TGTAGAAACTTGTCGGCGTG 58.506 50.000 6.85 0.00 0.00 5.34
2779 9260 1.862827 GTTGTAGAAACTTGTCGGCGT 59.137 47.619 6.85 0.00 0.00 5.68
2780 9261 2.572173 GTTGTAGAAACTTGTCGGCG 57.428 50.000 0.00 0.00 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.