Multiple sequence alignment - TraesCS7D01G084100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G084100 chr7D 100.000 6338 0 0 1 6338 51427573 51433910 0.000000e+00 11705.0
1 TraesCS7D01G084100 chr7D 90.188 958 62 13 2181 3113 364424464 364425414 0.000000e+00 1219.0
2 TraesCS7D01G084100 chr7D 91.862 811 50 10 2308 3113 309171290 309172089 0.000000e+00 1118.0
3 TraesCS7D01G084100 chr7A 92.298 3285 155 45 506 3736 53906025 53909265 0.000000e+00 4575.0
4 TraesCS7D01G084100 chr7A 95.373 1664 54 12 3770 5424 53909418 53911067 0.000000e+00 2625.0
5 TraesCS7D01G084100 chr7A 91.400 814 55 10 2308 3116 483548893 483548090 0.000000e+00 1101.0
6 TraesCS7D01G084100 chr7A 91.667 756 45 11 2308 3058 545252910 545253652 0.000000e+00 1031.0
7 TraesCS7D01G084100 chr7A 85.639 571 34 16 1 558 53905333 53905868 2.000000e-154 556.0
8 TraesCS7D01G084100 chr7A 87.212 391 31 14 5399 5782 53911085 53911463 1.630000e-115 427.0
9 TraesCS7D01G084100 chr7A 78.899 218 38 5 1702 1912 689316663 689316879 2.380000e-29 141.0
10 TraesCS7D01G084100 chr7A 96.552 58 1 1 3733 3789 53909343 53909400 1.880000e-15 95.3
11 TraesCS7D01G084100 chr4A 90.365 3207 187 67 598 3714 665629176 665626002 0.000000e+00 4098.0
12 TraesCS7D01G084100 chr4A 93.235 1700 68 22 3760 5432 665625887 665624208 0.000000e+00 2459.0
13 TraesCS7D01G084100 chr4A 86.152 686 48 26 5409 6080 665624189 665623537 0.000000e+00 697.0
14 TraesCS7D01G084100 chr4A 91.339 254 17 3 1 254 665630299 665630051 6.080000e-90 342.0
15 TraesCS7D01G084100 chr4A 79.724 217 32 9 1702 1912 21219909 21219699 5.120000e-31 147.0
16 TraesCS7D01G084100 chr2D 90.302 959 60 14 2184 3116 347574543 347573592 0.000000e+00 1225.0
17 TraesCS7D01G084100 chr4D 89.831 944 65 12 2184 3103 281041405 281040469 0.000000e+00 1182.0
18 TraesCS7D01G084100 chr6D 91.398 744 46 14 2308 3046 124252814 124253544 0.000000e+00 1003.0
19 TraesCS7D01G084100 chr6D 90.646 727 53 9 2308 3029 188894549 188895265 0.000000e+00 952.0
20 TraesCS7D01G084100 chr6A 87.708 480 47 11 2937 3407 411380964 411380488 3.340000e-152 549.0
21 TraesCS7D01G084100 chr2A 87.708 480 47 9 2937 3407 686563066 686563542 3.340000e-152 549.0
22 TraesCS7D01G084100 chr2A 87.421 477 42 13 2937 3407 686447639 686448103 3.360000e-147 532.0
23 TraesCS7D01G084100 chr2A 93.878 49 3 0 1340 1388 734887228 734887276 2.450000e-09 75.0
24 TraesCS7D01G084100 chr2B 85.849 212 28 2 1702 1912 731890691 731890901 2.300000e-54 224.0
25 TraesCS7D01G084100 chr2B 93.878 49 3 0 1340 1388 731890317 731890365 2.450000e-09 75.0
26 TraesCS7D01G084100 chr4B 96.364 55 2 0 1568 1622 558044584 558044638 2.430000e-14 91.6
27 TraesCS7D01G084100 chr4B 100.000 28 0 0 1333 1360 530364419 530364392 1.100000e-02 52.8
28 TraesCS7D01G084100 chr3A 89.855 69 5 2 4668 4734 42068222 42068154 3.150000e-13 87.9
29 TraesCS7D01G084100 chr1B 94.444 36 2 0 1325 1360 158462998 158462963 8.880000e-04 56.5
30 TraesCS7D01G084100 chrUn 100.000 28 0 0 745 772 99739675 99739648 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G084100 chr7D 51427573 51433910 6337 False 11705.00 11705 100.00000 1 6338 1 chr7D.!!$F1 6337
1 TraesCS7D01G084100 chr7D 364424464 364425414 950 False 1219.00 1219 90.18800 2181 3113 1 chr7D.!!$F3 932
2 TraesCS7D01G084100 chr7D 309171290 309172089 799 False 1118.00 1118 91.86200 2308 3113 1 chr7D.!!$F2 805
3 TraesCS7D01G084100 chr7A 53905333 53911463 6130 False 1655.66 4575 91.41480 1 5782 5 chr7A.!!$F3 5781
4 TraesCS7D01G084100 chr7A 483548090 483548893 803 True 1101.00 1101 91.40000 2308 3116 1 chr7A.!!$R1 808
5 TraesCS7D01G084100 chr7A 545252910 545253652 742 False 1031.00 1031 91.66700 2308 3058 1 chr7A.!!$F1 750
6 TraesCS7D01G084100 chr4A 665623537 665630299 6762 True 1899.00 4098 90.27275 1 6080 4 chr4A.!!$R2 6079
7 TraesCS7D01G084100 chr2D 347573592 347574543 951 True 1225.00 1225 90.30200 2184 3116 1 chr2D.!!$R1 932
8 TraesCS7D01G084100 chr4D 281040469 281041405 936 True 1182.00 1182 89.83100 2184 3103 1 chr4D.!!$R1 919
9 TraesCS7D01G084100 chr6D 124252814 124253544 730 False 1003.00 1003 91.39800 2308 3046 1 chr6D.!!$F1 738
10 TraesCS7D01G084100 chr6D 188894549 188895265 716 False 952.00 952 90.64600 2308 3029 1 chr6D.!!$F2 721

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 556 0.396695 TTCCGATCCCCTAGTTCGCT 60.397 55.000 0.00 0.0 36.55 4.93 F
977 1595 0.464554 GTTGCAGGGAGAGGGCATAC 60.465 60.000 0.00 0.0 37.39 2.39 F
1491 2128 0.322456 TCCTTTTCTGGTCCATGGCG 60.322 55.000 6.96 0.0 0.00 5.69 F
1494 2131 0.322456 TTTTCTGGTCCATGGCGAGG 60.322 55.000 6.96 0.0 0.00 4.63 F
3066 3789 0.681175 ATGGTGCCAAAAAGTGCCTC 59.319 50.000 0.00 0.0 0.00 4.70 F
3205 3933 0.601311 AGCGTCACTGTTTCCTCAGC 60.601 55.000 0.00 0.0 38.84 4.26 F
4234 5100 1.006758 TCCTGTCCCTCACCGTAAGAT 59.993 52.381 0.00 0.0 43.02 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1475 2112 0.322456 CCTCGCCATGGACCAGAAAA 60.322 55.000 18.40 0.0 0.00 2.29 R
1920 2563 2.223386 GGAGAGGAAGTCGACGATGAAG 60.223 54.545 10.46 0.0 0.00 3.02 R
3066 3789 0.388134 GCATGTGCTCAAGTGCCAAG 60.388 55.000 3.50 0.0 38.21 3.61 R
3188 3916 1.581934 TTGCTGAGGAAACAGTGACG 58.418 50.000 0.00 0.0 39.73 4.35 R
3893 4759 0.955919 CCGACACCCAGAAAAGCCTC 60.956 60.000 0.00 0.0 0.00 4.70 R
5108 5982 0.387622 CACCGCTGCAATCAACCAAG 60.388 55.000 0.00 0.0 0.00 3.61 R
6139 7109 0.032615 CACCTACCTGCTCCTCTCCT 60.033 60.000 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.973515 TGCAAGCTTCTCTTCTCTGGA 59.026 47.619 0.00 0.00 31.27 3.86
242 248 2.355010 AGTTGAAAGGCACTGAAGCT 57.645 45.000 0.00 0.00 40.86 3.74
252 258 2.494059 GCACTGAAGCTTGTTGTCCTA 58.506 47.619 2.10 0.00 0.00 2.94
253 259 3.077359 GCACTGAAGCTTGTTGTCCTAT 58.923 45.455 2.10 0.00 0.00 2.57
254 260 3.126000 GCACTGAAGCTTGTTGTCCTATC 59.874 47.826 2.10 0.00 0.00 2.08
255 261 4.573900 CACTGAAGCTTGTTGTCCTATCT 58.426 43.478 2.10 0.00 0.00 1.98
256 262 4.629200 CACTGAAGCTTGTTGTCCTATCTC 59.371 45.833 2.10 0.00 0.00 2.75
257 263 3.849911 TGAAGCTTGTTGTCCTATCTCG 58.150 45.455 2.10 0.00 0.00 4.04
275 281 4.584874 TCTCGAACACAATCTCTCTCTCT 58.415 43.478 0.00 0.00 0.00 3.10
278 284 3.181491 CGAACACAATCTCTCTCTCTCCC 60.181 52.174 0.00 0.00 0.00 4.30
344 524 6.102174 TCTCTTTACACCCCTAGTTCCTTTTT 59.898 38.462 0.00 0.00 0.00 1.94
365 545 3.757745 TTGCGAGAAAATTTCCGATCC 57.242 42.857 16.61 4.30 0.00 3.36
366 546 2.014128 TGCGAGAAAATTTCCGATCCC 58.986 47.619 16.61 4.04 0.00 3.85
367 547 1.333931 GCGAGAAAATTTCCGATCCCC 59.666 52.381 16.61 0.49 0.00 4.81
369 549 3.743269 GCGAGAAAATTTCCGATCCCCTA 60.743 47.826 16.61 0.00 0.00 3.53
370 550 4.058817 CGAGAAAATTTCCGATCCCCTAG 58.941 47.826 1.57 0.00 0.00 3.02
372 552 5.437946 GAGAAAATTTCCGATCCCCTAGTT 58.562 41.667 1.57 0.00 0.00 2.24
373 553 5.437946 AGAAAATTTCCGATCCCCTAGTTC 58.562 41.667 1.57 0.00 0.00 3.01
374 554 3.470645 AATTTCCGATCCCCTAGTTCG 57.529 47.619 0.00 0.00 37.42 3.95
375 555 0.462789 TTTCCGATCCCCTAGTTCGC 59.537 55.000 0.00 0.00 36.55 4.70
376 556 0.396695 TTCCGATCCCCTAGTTCGCT 60.397 55.000 0.00 0.00 36.55 4.93
377 557 0.475475 TCCGATCCCCTAGTTCGCTA 59.525 55.000 0.00 0.00 36.55 4.26
378 558 1.133699 TCCGATCCCCTAGTTCGCTAA 60.134 52.381 0.00 0.00 36.55 3.09
379 559 1.684983 CCGATCCCCTAGTTCGCTAAA 59.315 52.381 0.00 0.00 36.55 1.85
380 560 2.288273 CCGATCCCCTAGTTCGCTAAAG 60.288 54.545 0.00 0.00 36.55 1.85
390 570 7.210873 CCCTAGTTCGCTAAAGTCAATTATCT 58.789 38.462 0.00 0.00 0.00 1.98
453 633 1.671379 GCCGACCTTGAACCCTGTC 60.671 63.158 0.00 0.00 0.00 3.51
481 661 4.519213 AGGCCGTTTACTATATGCAAACA 58.481 39.130 0.00 0.00 32.82 2.83
522 703 3.760151 GGGGCTAGAATACGTTTTTGGTT 59.240 43.478 0.00 0.00 0.00 3.67
544 725 8.047911 TGGTTGAGGTATAATTCGGTTTTGATA 58.952 33.333 0.00 0.00 0.00 2.15
561 950 1.389609 ATACCAGCACCTCCGTACCG 61.390 60.000 0.00 0.00 0.00 4.02
563 952 2.490217 CAGCACCTCCGTACCGAG 59.510 66.667 4.42 4.42 0.00 4.63
572 961 2.149578 CTCCGTACCGAGTAATCCGAT 58.850 52.381 3.33 0.00 0.00 4.18
584 977 9.852091 ACCGAGTAATCCGATCTTAATTATTAC 57.148 33.333 0.00 0.00 32.52 1.89
585 978 9.298774 CCGAGTAATCCGATCTTAATTATTACC 57.701 37.037 0.00 0.00 32.69 2.85
586 979 9.298774 CGAGTAATCCGATCTTAATTATTACCC 57.701 37.037 0.00 0.00 32.69 3.69
587 980 9.597170 GAGTAATCCGATCTTAATTATTACCCC 57.403 37.037 0.00 0.00 32.69 4.95
588 981 8.546322 AGTAATCCGATCTTAATTATTACCCCC 58.454 37.037 0.00 0.00 32.69 5.40
593 1186 7.238933 TCCGATCTTAATTATTACCCCCAATCT 59.761 37.037 0.00 0.00 0.00 2.40
595 1188 7.336931 CGATCTTAATTATTACCCCCAATCTGG 59.663 40.741 0.00 0.00 37.25 3.86
601 1194 2.833151 TACCCCCAATCTGGACGGCT 62.833 60.000 0.00 0.00 40.96 5.52
764 1359 2.187424 CAGAGGCAGAGGCAGAGC 59.813 66.667 0.00 0.00 43.71 4.09
809 1408 3.141488 CGTCGAGGTGGGAGGGAG 61.141 72.222 0.00 0.00 0.00 4.30
810 1409 2.760385 GTCGAGGTGGGAGGGAGG 60.760 72.222 0.00 0.00 0.00 4.30
907 1521 0.745845 ATCCATCGAGCACCAGCAAC 60.746 55.000 0.00 0.00 45.49 4.17
908 1522 1.672030 CCATCGAGCACCAGCAACA 60.672 57.895 0.00 0.00 45.49 3.33
909 1523 1.236616 CCATCGAGCACCAGCAACAA 61.237 55.000 0.00 0.00 45.49 2.83
927 1542 2.040278 ACAACAATCCTCTGCTTAGCCA 59.960 45.455 0.29 0.00 0.00 4.75
931 1546 0.683973 ATCCTCTGCTTAGCCATCGG 59.316 55.000 0.29 0.00 0.00 4.18
975 1593 2.679716 GTTGCAGGGAGAGGGCAT 59.320 61.111 0.00 0.00 37.39 4.40
976 1594 1.635817 GGTTGCAGGGAGAGGGCATA 61.636 60.000 0.00 0.00 37.39 3.14
977 1595 0.464554 GTTGCAGGGAGAGGGCATAC 60.465 60.000 0.00 0.00 37.39 2.39
978 1596 0.913934 TTGCAGGGAGAGGGCATACA 60.914 55.000 0.00 0.00 37.39 2.29
979 1597 1.340399 TGCAGGGAGAGGGCATACAG 61.340 60.000 0.00 0.00 31.58 2.74
980 1598 1.449353 CAGGGAGAGGGCATACAGC 59.551 63.158 0.00 0.00 44.65 4.40
1020 1650 1.468985 TGGTGGTGAACAACAAGGTG 58.531 50.000 0.00 0.00 45.64 4.00
1467 2104 1.316706 TTCGCCGCCCCATTTTTAGG 61.317 55.000 0.00 0.00 0.00 2.69
1476 2113 3.821587 GCCCCATTTTTAGGACCTTCCTT 60.822 47.826 0.00 0.00 46.91 3.36
1491 2128 0.322456 TCCTTTTCTGGTCCATGGCG 60.322 55.000 6.96 0.00 0.00 5.69
1493 2130 1.089920 CTTTTCTGGTCCATGGCGAG 58.910 55.000 6.96 9.24 0.00 5.03
1494 2131 0.322456 TTTTCTGGTCCATGGCGAGG 60.322 55.000 6.96 0.00 0.00 4.63
1495 2132 2.819984 TTTCTGGTCCATGGCGAGGC 62.820 60.000 6.96 0.00 0.00 4.70
1500 2137 1.146041 GTCCATGGCGAGGCATACA 59.854 57.895 6.96 0.00 0.00 2.29
1522 2159 2.127118 CGCCAGCTGCAAGTTTCG 60.127 61.111 8.66 0.00 41.33 3.46
1665 2308 2.768253 AACTCTGTCATTCATGGCGA 57.232 45.000 0.00 0.00 34.48 5.54
1678 2321 2.622942 TCATGGCGAGAAATTAATGGGC 59.377 45.455 0.00 0.00 0.00 5.36
1851 2494 1.147153 GCAGCCCATCCTGTACCTC 59.853 63.158 0.00 0.00 35.28 3.85
2182 2841 1.341156 ACCACCTATGCTCTGCCTCC 61.341 60.000 0.00 0.00 0.00 4.30
2191 2850 0.820074 GCTCTGCCTCCGTCTAGCTA 60.820 60.000 0.00 0.00 0.00 3.32
2200 2859 3.057876 CCTCCGTCTAGCTAATAGCACAG 60.058 52.174 15.28 10.80 45.56 3.66
2208 2867 7.259161 GTCTAGCTAATAGCACAGTGTTTAGT 58.741 38.462 15.28 3.09 45.56 2.24
2219 2878 7.200455 AGCACAGTGTTTAGTTCCAATTTAAC 58.800 34.615 1.61 0.00 0.00 2.01
2427 3117 6.597672 TCATTTGTCAATTAGTCGGCTAATGT 59.402 34.615 22.27 10.21 44.60 2.71
3066 3789 0.681175 ATGGTGCCAAAAAGTGCCTC 59.319 50.000 0.00 0.00 0.00 4.70
3131 3859 7.100458 CCATAGGCAGTTTAAAATTAGCACT 57.900 36.000 0.00 0.00 0.00 4.40
3137 3865 7.768582 AGGCAGTTTAAAATTAGCACTGTTTTT 59.231 29.630 12.51 0.00 37.71 1.94
3156 3884 5.421212 TTTTTCCATGCAAACAAATCAGC 57.579 34.783 0.00 0.00 0.00 4.26
3158 3886 3.747854 TCCATGCAAACAAATCAGCAA 57.252 38.095 0.00 0.00 40.76 3.91
3161 3889 5.170021 TCCATGCAAACAAATCAGCAATAC 58.830 37.500 0.00 0.00 40.76 1.89
3165 3893 6.528537 TGCAAACAAATCAGCAATACCTAT 57.471 33.333 0.00 0.00 33.48 2.57
3166 3894 7.637631 TGCAAACAAATCAGCAATACCTATA 57.362 32.000 0.00 0.00 33.48 1.31
3188 3916 3.222603 TCCCTTTCTCCTTCACAAAAGC 58.777 45.455 0.00 0.00 0.00 3.51
3202 3930 2.354821 ACAAAAGCGTCACTGTTTCCTC 59.645 45.455 0.00 0.00 0.00 3.71
3203 3931 2.325583 AAAGCGTCACTGTTTCCTCA 57.674 45.000 0.00 0.00 0.00 3.86
3204 3932 1.871080 AAGCGTCACTGTTTCCTCAG 58.129 50.000 0.00 0.00 40.80 3.35
3205 3933 0.601311 AGCGTCACTGTTTCCTCAGC 60.601 55.000 0.00 0.00 38.84 4.26
3451 4184 4.772231 CCATTGCAGCCTGCCCCT 62.772 66.667 15.29 0.00 44.23 4.79
3465 4198 1.492599 TGCCCCTTTTTCCCTTTTTGG 59.507 47.619 0.00 0.00 0.00 3.28
3507 4240 4.489810 GTCTCTGATGTGTCACCTGTTAG 58.510 47.826 0.00 0.00 0.00 2.34
3743 4565 3.988379 TGTTGATCTTGAGGCAAACAC 57.012 42.857 0.00 0.00 0.00 3.32
3844 4709 4.333649 GCAATAGCAAGCAGATGTACTGAA 59.666 41.667 0.00 0.00 44.04 3.02
3860 4725 8.801715 ATGTACTGAACAATCACACATTTTTC 57.198 30.769 0.00 0.00 42.70 2.29
3869 4734 6.549364 ACAATCACACATTTTTCCTCCTTGTA 59.451 34.615 0.00 0.00 0.00 2.41
3962 4828 3.070734 CCTCCACCATCATCTCCTACTTG 59.929 52.174 0.00 0.00 0.00 3.16
4034 4900 2.733820 GCATCTCTGAACATGCTTCG 57.266 50.000 12.00 0.00 41.93 3.79
4085 4951 7.048629 TCATAACCTGTCTCTGATCAATCTC 57.951 40.000 0.00 0.00 0.00 2.75
4234 5100 1.006758 TCCTGTCCCTCACCGTAAGAT 59.993 52.381 0.00 0.00 43.02 2.40
4251 5117 7.440556 ACCGTAAGATCAATCAATCAATCTCTG 59.559 37.037 0.00 0.00 43.02 3.35
4253 5119 7.440556 CGTAAGATCAATCAATCAATCTCTGGT 59.559 37.037 0.00 0.00 43.02 4.00
4306 5173 4.500887 GGCATTTTGATCTGATGGTGGATG 60.501 45.833 0.00 0.00 0.00 3.51
4307 5174 4.340097 GCATTTTGATCTGATGGTGGATGA 59.660 41.667 0.00 0.00 0.00 2.92
4309 5176 6.462487 GCATTTTGATCTGATGGTGGATGATT 60.462 38.462 0.00 0.00 0.00 2.57
4314 5181 5.591472 TGATCTGATGGTGGATGATTTTGTC 59.409 40.000 0.00 0.00 0.00 3.18
4315 5182 4.272489 TCTGATGGTGGATGATTTTGTCC 58.728 43.478 0.00 0.00 35.02 4.02
4736 5603 4.083862 GTCCAGGTCGGGCTGTCC 62.084 72.222 0.89 0.89 35.97 4.02
5036 5907 2.257676 GGTGAGTCCGACCGTCAC 59.742 66.667 10.92 10.92 39.96 3.67
5108 5982 2.313234 TCGATTCACTGACGAACGAAC 58.687 47.619 0.14 0.00 33.20 3.95
5112 5986 1.847818 TCACTGACGAACGAACTTGG 58.152 50.000 0.14 0.00 0.00 3.61
5428 6359 6.421485 AGAATTAATCAGGATGCAGAGTGTT 58.579 36.000 0.00 0.00 34.76 3.32
5430 6361 2.414994 ATCAGGATGCAGAGTGTTGG 57.585 50.000 0.00 0.00 34.76 3.77
5432 6363 1.002430 TCAGGATGCAGAGTGTTGGTC 59.998 52.381 0.00 0.00 34.76 4.02
5433 6364 1.059098 AGGATGCAGAGTGTTGGTCA 58.941 50.000 0.00 0.00 0.00 4.02
5435 6366 1.002430 GGATGCAGAGTGTTGGTCAGA 59.998 52.381 0.00 0.00 0.00 3.27
5437 6368 2.174363 TGCAGAGTGTTGGTCAGATG 57.826 50.000 0.00 0.00 0.00 2.90
5438 6369 1.271001 TGCAGAGTGTTGGTCAGATGG 60.271 52.381 0.00 0.00 0.00 3.51
5439 6370 1.002430 GCAGAGTGTTGGTCAGATGGA 59.998 52.381 0.00 0.00 0.00 3.41
5440 6371 2.934364 GCAGAGTGTTGGTCAGATGGAG 60.934 54.545 0.00 0.00 0.00 3.86
5441 6372 2.301296 CAGAGTGTTGGTCAGATGGAGT 59.699 50.000 0.00 0.00 0.00 3.85
5442 6373 2.301296 AGAGTGTTGGTCAGATGGAGTG 59.699 50.000 0.00 0.00 0.00 3.51
5443 6374 2.300152 GAGTGTTGGTCAGATGGAGTGA 59.700 50.000 0.00 0.00 0.00 3.41
5444 6375 2.909006 AGTGTTGGTCAGATGGAGTGAT 59.091 45.455 0.00 0.00 0.00 3.06
5445 6376 3.328931 AGTGTTGGTCAGATGGAGTGATT 59.671 43.478 0.00 0.00 0.00 2.57
5446 6377 4.532126 AGTGTTGGTCAGATGGAGTGATTA 59.468 41.667 0.00 0.00 0.00 1.75
5447 6378 4.872691 GTGTTGGTCAGATGGAGTGATTAG 59.127 45.833 0.00 0.00 0.00 1.73
5448 6379 4.532126 TGTTGGTCAGATGGAGTGATTAGT 59.468 41.667 0.00 0.00 0.00 2.24
5490 6421 3.701040 GGTGCTGATCTCTCTTCTCTTCT 59.299 47.826 0.00 0.00 0.00 2.85
5492 6423 3.627123 TGCTGATCTCTCTTCTCTTCTCG 59.373 47.826 0.00 0.00 0.00 4.04
5493 6424 3.627577 GCTGATCTCTCTTCTCTTCTCGT 59.372 47.826 0.00 0.00 0.00 4.18
5495 6426 5.097742 TGATCTCTCTTCTCTTCTCGTCT 57.902 43.478 0.00 0.00 0.00 4.18
5511 6442 3.493334 TCGTCTGTGGAGAAGAGGTTTA 58.507 45.455 0.00 0.00 32.45 2.01
5519 6450 7.228706 TCTGTGGAGAAGAGGTTTATGTTTTTC 59.771 37.037 0.00 0.00 0.00 2.29
5520 6451 7.060421 TGTGGAGAAGAGGTTTATGTTTTTCT 58.940 34.615 0.00 0.00 0.00 2.52
5528 6461 8.924511 AGAGGTTTATGTTTTTCTGATGAAGA 57.075 30.769 0.00 0.00 33.28 2.87
5529 6462 9.354673 AGAGGTTTATGTTTTTCTGATGAAGAA 57.645 29.630 0.00 0.00 43.37 2.52
5530 6463 9.617975 GAGGTTTATGTTTTTCTGATGAAGAAG 57.382 33.333 0.00 0.00 45.64 2.85
5531 6464 9.354673 AGGTTTATGTTTTTCTGATGAAGAAGA 57.645 29.630 0.00 0.00 45.64 2.87
5580 6519 3.186613 GCGGTTGTTGTAGAAGAAGAAGG 59.813 47.826 0.00 0.00 0.00 3.46
5651 6593 4.945543 TCCATCATGTCCAACTCATTCTTG 59.054 41.667 0.00 0.00 0.00 3.02
5673 6615 0.536460 GCTTGTTCGGTTGGAAGGGA 60.536 55.000 0.00 0.00 34.69 4.20
5715 6657 2.762327 CAAAATCCCCCTCAATCCACTG 59.238 50.000 0.00 0.00 0.00 3.66
5749 6691 7.510549 TCAAGAGAGGTTTAATCAAACAAGG 57.489 36.000 0.00 0.00 44.92 3.61
5752 6694 4.740902 AGAGGTTTAATCAAACAAGGCCT 58.259 39.130 0.00 0.00 44.92 5.19
5756 6698 5.543790 AGGTTTAATCAAACAAGGCCTGAAT 59.456 36.000 5.69 0.00 44.92 2.57
5761 6703 4.789012 TCAAACAAGGCCTGAATGAATC 57.211 40.909 5.69 0.00 0.00 2.52
5765 6707 1.753073 CAAGGCCTGAATGAATCCCAC 59.247 52.381 5.69 0.00 0.00 4.61
5766 6708 0.107017 AGGCCTGAATGAATCCCACG 60.107 55.000 3.11 0.00 0.00 4.94
5782 6724 2.486918 CCACGATGCATGAGCTCATAA 58.513 47.619 28.27 19.55 42.74 1.90
5786 6728 4.034858 CACGATGCATGAGCTCATAAAAGT 59.965 41.667 28.27 19.98 42.74 2.66
5787 6729 4.272018 ACGATGCATGAGCTCATAAAAGTC 59.728 41.667 28.27 18.85 42.74 3.01
5788 6730 4.271776 CGATGCATGAGCTCATAAAAGTCA 59.728 41.667 28.27 17.76 42.74 3.41
5810 6774 1.816074 GGTAACCTTGTCAATCGCCA 58.184 50.000 0.00 0.00 0.00 5.69
5811 6775 2.156098 GGTAACCTTGTCAATCGCCAA 58.844 47.619 0.00 0.00 0.00 4.52
5812 6776 2.554893 GGTAACCTTGTCAATCGCCAAA 59.445 45.455 0.00 0.00 0.00 3.28
5813 6777 3.192633 GGTAACCTTGTCAATCGCCAAAT 59.807 43.478 0.00 0.00 0.00 2.32
5814 6778 4.396790 GGTAACCTTGTCAATCGCCAAATA 59.603 41.667 0.00 0.00 0.00 1.40
5815 6779 5.067283 GGTAACCTTGTCAATCGCCAAATAT 59.933 40.000 0.00 0.00 0.00 1.28
5816 6780 4.900635 ACCTTGTCAATCGCCAAATATC 57.099 40.909 0.00 0.00 0.00 1.63
5817 6781 4.269183 ACCTTGTCAATCGCCAAATATCA 58.731 39.130 0.00 0.00 0.00 2.15
5818 6782 4.704540 ACCTTGTCAATCGCCAAATATCAA 59.295 37.500 0.00 0.00 0.00 2.57
5819 6783 5.036737 CCTTGTCAATCGCCAAATATCAAC 58.963 41.667 0.00 0.00 0.00 3.18
5837 6801 2.935481 TTGTAGGGGCAGCAGGCT 60.935 61.111 1.94 0.00 44.01 4.58
5877 6841 1.548719 TCCGAGAACATGTGTAGTGGG 59.451 52.381 0.00 0.00 0.00 4.61
5894 6858 1.960689 TGGGGCCTCTTTTCTTTTTCG 59.039 47.619 3.07 0.00 0.00 3.46
5922 6886 4.545610 AGTTAATTGCCAATTGTCACGTG 58.454 39.130 12.86 9.94 32.38 4.49
5925 6889 4.576216 AATTGCCAATTGTCACGTGTTA 57.424 36.364 16.51 2.72 0.00 2.41
5927 6891 3.341857 TGCCAATTGTCACGTGTTAAC 57.658 42.857 16.51 7.21 0.00 2.01
5928 6892 2.946329 TGCCAATTGTCACGTGTTAACT 59.054 40.909 16.51 0.00 0.00 2.24
5930 6894 3.972502 GCCAATTGTCACGTGTTAACTTC 59.027 43.478 16.51 0.00 0.00 3.01
5931 6895 4.208355 CCAATTGTCACGTGTTAACTTCG 58.792 43.478 16.51 17.27 0.00 3.79
5932 6896 3.515071 ATTGTCACGTGTTAACTTCGC 57.485 42.857 16.51 7.74 0.00 4.70
5933 6897 1.923899 TGTCACGTGTTAACTTCGCA 58.076 45.000 16.51 9.57 0.00 5.10
5934 6898 1.589320 TGTCACGTGTTAACTTCGCAC 59.411 47.619 16.51 15.77 0.00 5.34
5936 6900 4.392945 CGTGTTAACTTCGCACGC 57.607 55.556 7.22 0.00 46.86 5.34
5937 6901 1.504248 CGTGTTAACTTCGCACGCG 60.504 57.895 3.53 3.53 46.86 6.01
5974 6939 2.476772 TGGCGACAATATGTGGTGC 58.523 52.632 0.00 0.00 37.44 5.01
5989 6954 1.452108 GTGCGAAGAGGAATGGGGG 60.452 63.158 0.00 0.00 0.00 5.40
6018 6983 2.579684 AAGAGAAGGCGACCGATGGC 62.580 60.000 0.00 0.00 0.00 4.40
6080 7050 0.758685 CACCCACCCACCAACACAAT 60.759 55.000 0.00 0.00 0.00 2.71
6081 7051 0.854218 ACCCACCCACCAACACAATA 59.146 50.000 0.00 0.00 0.00 1.90
6082 7052 1.431243 ACCCACCCACCAACACAATAT 59.569 47.619 0.00 0.00 0.00 1.28
6083 7053 1.824230 CCCACCCACCAACACAATATG 59.176 52.381 0.00 0.00 0.00 1.78
6084 7054 2.556336 CCCACCCACCAACACAATATGA 60.556 50.000 0.00 0.00 0.00 2.15
6085 7055 2.491693 CCACCCACCAACACAATATGAC 59.508 50.000 0.00 0.00 0.00 3.06
6086 7056 2.161410 CACCCACCAACACAATATGACG 59.839 50.000 0.00 0.00 0.00 4.35
6087 7057 2.039216 ACCCACCAACACAATATGACGA 59.961 45.455 0.00 0.00 0.00 4.20
6088 7058 2.418628 CCCACCAACACAATATGACGAC 59.581 50.000 0.00 0.00 0.00 4.34
6089 7059 2.418628 CCACCAACACAATATGACGACC 59.581 50.000 0.00 0.00 0.00 4.79
6090 7060 2.093625 CACCAACACAATATGACGACCG 59.906 50.000 0.00 0.00 0.00 4.79
6091 7061 2.028839 ACCAACACAATATGACGACCGA 60.029 45.455 0.00 0.00 0.00 4.69
6092 7062 2.603110 CCAACACAATATGACGACCGAG 59.397 50.000 0.00 0.00 0.00 4.63
6093 7063 3.250744 CAACACAATATGACGACCGAGT 58.749 45.455 0.00 0.00 0.00 4.18
6094 7064 4.417506 CAACACAATATGACGACCGAGTA 58.582 43.478 0.00 0.00 0.00 2.59
6095 7065 4.707030 ACACAATATGACGACCGAGTAA 57.293 40.909 0.00 0.00 0.00 2.24
6096 7066 4.418392 ACACAATATGACGACCGAGTAAC 58.582 43.478 0.00 0.00 0.00 2.50
6097 7067 3.795101 CACAATATGACGACCGAGTAACC 59.205 47.826 0.00 0.00 0.00 2.85
6098 7068 3.181483 ACAATATGACGACCGAGTAACCC 60.181 47.826 0.00 0.00 0.00 4.11
6099 7069 2.425143 TATGACGACCGAGTAACCCT 57.575 50.000 0.00 0.00 0.00 4.34
6100 7070 2.425143 ATGACGACCGAGTAACCCTA 57.575 50.000 0.00 0.00 0.00 3.53
6101 7071 1.742761 TGACGACCGAGTAACCCTAG 58.257 55.000 0.00 0.00 0.00 3.02
6102 7072 1.278985 TGACGACCGAGTAACCCTAGA 59.721 52.381 0.00 0.00 0.00 2.43
6103 7073 2.290260 TGACGACCGAGTAACCCTAGAA 60.290 50.000 0.00 0.00 0.00 2.10
6104 7074 2.749621 GACGACCGAGTAACCCTAGAAA 59.250 50.000 0.00 0.00 0.00 2.52
6105 7075 2.751806 ACGACCGAGTAACCCTAGAAAG 59.248 50.000 0.00 0.00 0.00 2.62
6106 7076 2.098770 CGACCGAGTAACCCTAGAAAGG 59.901 54.545 0.00 0.00 43.25 3.11
6118 7088 3.501349 CCTAGAAAGGGGATCGATCTCA 58.499 50.000 26.08 4.12 39.48 3.27
6119 7089 3.257127 CCTAGAAAGGGGATCGATCTCAC 59.743 52.174 26.08 16.33 39.48 3.51
6120 7090 1.683917 AGAAAGGGGATCGATCTCACG 59.316 52.381 26.08 0.00 0.00 4.35
6121 7091 1.409427 GAAAGGGGATCGATCTCACGT 59.591 52.381 26.08 12.33 34.70 4.49
6122 7092 0.747255 AAGGGGATCGATCTCACGTG 59.253 55.000 26.08 9.94 34.70 4.49
6123 7093 0.106669 AGGGGATCGATCTCACGTGA 60.107 55.000 26.08 18.88 34.70 4.35
6124 7094 0.312416 GGGGATCGATCTCACGTGAG 59.688 60.000 34.76 34.76 43.36 3.51
6134 7104 1.550524 TCTCACGTGAGAGGAATTGGG 59.449 52.381 37.87 14.96 45.48 4.12
6135 7105 0.613260 TCACGTGAGAGGAATTGGGG 59.387 55.000 15.76 0.00 0.00 4.96
6136 7106 0.613260 CACGTGAGAGGAATTGGGGA 59.387 55.000 10.90 0.00 0.00 4.81
6137 7107 1.210478 CACGTGAGAGGAATTGGGGAT 59.790 52.381 10.90 0.00 0.00 3.85
6138 7108 1.210478 ACGTGAGAGGAATTGGGGATG 59.790 52.381 0.00 0.00 0.00 3.51
6139 7109 1.486310 CGTGAGAGGAATTGGGGATGA 59.514 52.381 0.00 0.00 0.00 2.92
6140 7110 2.484417 CGTGAGAGGAATTGGGGATGAG 60.484 54.545 0.00 0.00 0.00 2.90
6141 7111 2.130193 TGAGAGGAATTGGGGATGAGG 58.870 52.381 0.00 0.00 0.00 3.86
6142 7112 2.293788 TGAGAGGAATTGGGGATGAGGA 60.294 50.000 0.00 0.00 0.00 3.71
6143 7113 2.371510 GAGAGGAATTGGGGATGAGGAG 59.628 54.545 0.00 0.00 0.00 3.69
6144 7114 2.021639 AGAGGAATTGGGGATGAGGAGA 60.022 50.000 0.00 0.00 0.00 3.71
6145 7115 2.371510 GAGGAATTGGGGATGAGGAGAG 59.628 54.545 0.00 0.00 0.00 3.20
6146 7116 1.423161 GGAATTGGGGATGAGGAGAGG 59.577 57.143 0.00 0.00 0.00 3.69
6147 7117 2.412591 GAATTGGGGATGAGGAGAGGA 58.587 52.381 0.00 0.00 0.00 3.71
6148 7118 2.115337 ATTGGGGATGAGGAGAGGAG 57.885 55.000 0.00 0.00 0.00 3.69
6149 7119 0.692419 TTGGGGATGAGGAGAGGAGC 60.692 60.000 0.00 0.00 0.00 4.70
6150 7120 1.074926 GGGGATGAGGAGAGGAGCA 60.075 63.158 0.00 0.00 0.00 4.26
6151 7121 1.120795 GGGGATGAGGAGAGGAGCAG 61.121 65.000 0.00 0.00 0.00 4.24
6152 7122 1.120795 GGGATGAGGAGAGGAGCAGG 61.121 65.000 0.00 0.00 0.00 4.85
6153 7123 0.398381 GGATGAGGAGAGGAGCAGGT 60.398 60.000 0.00 0.00 0.00 4.00
6154 7124 1.133325 GGATGAGGAGAGGAGCAGGTA 60.133 57.143 0.00 0.00 0.00 3.08
6155 7125 2.238521 GATGAGGAGAGGAGCAGGTAG 58.761 57.143 0.00 0.00 0.00 3.18
6156 7126 0.260230 TGAGGAGAGGAGCAGGTAGG 59.740 60.000 0.00 0.00 0.00 3.18
6157 7127 0.260523 GAGGAGAGGAGCAGGTAGGT 59.739 60.000 0.00 0.00 0.00 3.08
6158 7128 0.032615 AGGAGAGGAGCAGGTAGGTG 60.033 60.000 0.00 0.00 0.00 4.00
6159 7129 0.033011 GGAGAGGAGCAGGTAGGTGA 60.033 60.000 0.00 0.00 0.00 4.02
6160 7130 1.107945 GAGAGGAGCAGGTAGGTGAC 58.892 60.000 0.00 0.00 0.00 3.67
6161 7131 0.409876 AGAGGAGCAGGTAGGTGACA 59.590 55.000 0.00 0.00 0.00 3.58
6162 7132 1.007721 AGAGGAGCAGGTAGGTGACAT 59.992 52.381 0.00 0.00 0.00 3.06
6163 7133 2.245028 AGAGGAGCAGGTAGGTGACATA 59.755 50.000 0.00 0.00 0.00 2.29
6164 7134 2.625790 GAGGAGCAGGTAGGTGACATAG 59.374 54.545 0.00 0.00 0.00 2.23
6165 7135 2.245028 AGGAGCAGGTAGGTGACATAGA 59.755 50.000 0.00 0.00 0.00 1.98
6166 7136 2.362717 GGAGCAGGTAGGTGACATAGAC 59.637 54.545 0.00 0.00 0.00 2.59
6167 7137 2.025155 AGCAGGTAGGTGACATAGACG 58.975 52.381 0.00 0.00 0.00 4.18
6168 7138 2.022195 GCAGGTAGGTGACATAGACGA 58.978 52.381 0.00 0.00 0.00 4.20
6169 7139 2.426024 GCAGGTAGGTGACATAGACGAA 59.574 50.000 0.00 0.00 0.00 3.85
6170 7140 3.489398 GCAGGTAGGTGACATAGACGAAG 60.489 52.174 0.00 0.00 0.00 3.79
6171 7141 3.945921 CAGGTAGGTGACATAGACGAAGA 59.054 47.826 0.00 0.00 0.00 2.87
6172 7142 4.035792 CAGGTAGGTGACATAGACGAAGAG 59.964 50.000 0.00 0.00 0.00 2.85
6173 7143 4.080469 AGGTAGGTGACATAGACGAAGAGA 60.080 45.833 0.00 0.00 0.00 3.10
6174 7144 4.273969 GGTAGGTGACATAGACGAAGAGAG 59.726 50.000 0.00 0.00 0.00 3.20
6175 7145 3.283751 AGGTGACATAGACGAAGAGAGG 58.716 50.000 0.00 0.00 0.00 3.69
6176 7146 3.018149 GGTGACATAGACGAAGAGAGGT 58.982 50.000 0.00 0.00 0.00 3.85
6177 7147 3.181495 GGTGACATAGACGAAGAGAGGTG 60.181 52.174 0.00 0.00 0.00 4.00
6178 7148 3.690139 GTGACATAGACGAAGAGAGGTGA 59.310 47.826 0.00 0.00 0.00 4.02
6179 7149 3.942115 TGACATAGACGAAGAGAGGTGAG 59.058 47.826 0.00 0.00 0.00 3.51
6180 7150 4.193090 GACATAGACGAAGAGAGGTGAGA 58.807 47.826 0.00 0.00 0.00 3.27
6181 7151 4.590918 ACATAGACGAAGAGAGGTGAGAA 58.409 43.478 0.00 0.00 0.00 2.87
6182 7152 5.197451 ACATAGACGAAGAGAGGTGAGAAT 58.803 41.667 0.00 0.00 0.00 2.40
6183 7153 6.358178 ACATAGACGAAGAGAGGTGAGAATA 58.642 40.000 0.00 0.00 0.00 1.75
6184 7154 6.829298 ACATAGACGAAGAGAGGTGAGAATAA 59.171 38.462 0.00 0.00 0.00 1.40
6185 7155 7.504238 ACATAGACGAAGAGAGGTGAGAATAAT 59.496 37.037 0.00 0.00 0.00 1.28
6186 7156 6.783708 AGACGAAGAGAGGTGAGAATAATT 57.216 37.500 0.00 0.00 0.00 1.40
6187 7157 6.801575 AGACGAAGAGAGGTGAGAATAATTC 58.198 40.000 0.00 0.00 0.00 2.17
6188 7158 6.378564 AGACGAAGAGAGGTGAGAATAATTCA 59.621 38.462 0.00 0.00 0.00 2.57
6189 7159 6.568869 ACGAAGAGAGGTGAGAATAATTCAG 58.431 40.000 0.00 0.00 0.00 3.02
6190 7160 6.378564 ACGAAGAGAGGTGAGAATAATTCAGA 59.621 38.462 0.00 0.00 0.00 3.27
6191 7161 6.917477 CGAAGAGAGGTGAGAATAATTCAGAG 59.083 42.308 0.00 0.00 0.00 3.35
6192 7162 7.416213 CGAAGAGAGGTGAGAATAATTCAGAGT 60.416 40.741 0.00 0.00 0.00 3.24
6193 7163 7.732222 AGAGAGGTGAGAATAATTCAGAGTT 57.268 36.000 0.00 0.00 0.00 3.01
6194 7164 8.830915 AGAGAGGTGAGAATAATTCAGAGTTA 57.169 34.615 0.00 0.00 0.00 2.24
6195 7165 9.432982 AGAGAGGTGAGAATAATTCAGAGTTAT 57.567 33.333 0.00 0.00 0.00 1.89
6196 7166 9.691362 GAGAGGTGAGAATAATTCAGAGTTATC 57.309 37.037 0.00 0.00 0.00 1.75
6197 7167 9.432982 AGAGGTGAGAATAATTCAGAGTTATCT 57.567 33.333 0.00 0.00 35.63 1.98
6211 7181 9.877178 TTCAGAGTTATCTTATTTCTTGTCCTC 57.123 33.333 0.00 0.00 31.64 3.71
6212 7182 8.478877 TCAGAGTTATCTTATTTCTTGTCCTCC 58.521 37.037 0.00 0.00 31.64 4.30
6213 7183 8.482128 CAGAGTTATCTTATTTCTTGTCCTCCT 58.518 37.037 0.00 0.00 31.64 3.69
6214 7184 8.700973 AGAGTTATCTTATTTCTTGTCCTCCTC 58.299 37.037 0.00 0.00 28.57 3.71
6215 7185 8.616799 AGTTATCTTATTTCTTGTCCTCCTCT 57.383 34.615 0.00 0.00 0.00 3.69
6216 7186 8.482128 AGTTATCTTATTTCTTGTCCTCCTCTG 58.518 37.037 0.00 0.00 0.00 3.35
6217 7187 6.882768 ATCTTATTTCTTGTCCTCCTCTGT 57.117 37.500 0.00 0.00 0.00 3.41
6218 7188 6.287589 TCTTATTTCTTGTCCTCCTCTGTC 57.712 41.667 0.00 0.00 0.00 3.51
6219 7189 6.019748 TCTTATTTCTTGTCCTCCTCTGTCT 58.980 40.000 0.00 0.00 0.00 3.41
6220 7190 4.817318 ATTTCTTGTCCTCCTCTGTCTC 57.183 45.455 0.00 0.00 0.00 3.36
6221 7191 1.827681 TCTTGTCCTCCTCTGTCTCG 58.172 55.000 0.00 0.00 0.00 4.04
6222 7192 1.074084 TCTTGTCCTCCTCTGTCTCGT 59.926 52.381 0.00 0.00 0.00 4.18
6223 7193 2.305052 TCTTGTCCTCCTCTGTCTCGTA 59.695 50.000 0.00 0.00 0.00 3.43
6224 7194 2.110901 TGTCCTCCTCTGTCTCGTAC 57.889 55.000 0.00 0.00 0.00 3.67
6225 7195 1.008329 GTCCTCCTCTGTCTCGTACG 58.992 60.000 9.53 9.53 0.00 3.67
6226 7196 0.743701 TCCTCCTCTGTCTCGTACGC 60.744 60.000 11.24 0.00 0.00 4.42
6227 7197 1.025113 CCTCCTCTGTCTCGTACGCA 61.025 60.000 11.24 1.80 0.00 5.24
6228 7198 0.375454 CTCCTCTGTCTCGTACGCAG 59.625 60.000 11.24 12.47 0.00 5.18
6229 7199 1.025113 TCCTCTGTCTCGTACGCAGG 61.025 60.000 11.24 8.39 0.00 4.85
6230 7200 1.429825 CTCTGTCTCGTACGCAGGG 59.570 63.158 11.24 8.65 0.00 4.45
6231 7201 1.303074 TCTGTCTCGTACGCAGGGT 60.303 57.895 11.24 0.00 0.00 4.34
6232 7202 0.892358 TCTGTCTCGTACGCAGGGTT 60.892 55.000 11.24 0.00 0.00 4.11
6233 7203 0.732880 CTGTCTCGTACGCAGGGTTG 60.733 60.000 11.24 0.00 0.00 3.77
6234 7204 1.174078 TGTCTCGTACGCAGGGTTGA 61.174 55.000 11.24 0.00 0.00 3.18
6235 7205 0.456312 GTCTCGTACGCAGGGTTGAG 60.456 60.000 11.24 11.32 33.55 3.02
6236 7206 1.805945 CTCGTACGCAGGGTTGAGC 60.806 63.158 11.24 0.00 0.00 4.26
6237 7207 2.048597 CGTACGCAGGGTTGAGCA 60.049 61.111 0.52 0.00 0.00 4.26
6238 7208 2.380410 CGTACGCAGGGTTGAGCAC 61.380 63.158 0.52 0.00 0.00 4.40
6239 7209 1.301401 GTACGCAGGGTTGAGCACA 60.301 57.895 0.00 0.00 0.00 4.57
6240 7210 1.301401 TACGCAGGGTTGAGCACAC 60.301 57.895 0.00 0.00 0.00 3.82
6241 7211 2.034048 TACGCAGGGTTGAGCACACA 62.034 55.000 0.00 0.00 0.00 3.72
6242 7212 2.896801 CGCAGGGTTGAGCACACAC 61.897 63.158 0.00 0.00 0.00 3.82
6243 7213 1.823470 GCAGGGTTGAGCACACACA 60.823 57.895 0.00 0.00 0.00 3.72
6244 7214 2.024918 CAGGGTTGAGCACACACAC 58.975 57.895 0.00 0.00 0.00 3.82
6245 7215 1.523711 AGGGTTGAGCACACACACG 60.524 57.895 0.00 0.00 0.00 4.49
6246 7216 2.327940 GGTTGAGCACACACACGC 59.672 61.111 0.00 0.00 0.00 5.34
6247 7217 2.468670 GGTTGAGCACACACACGCA 61.469 57.895 0.00 0.00 0.00 5.24
6248 7218 1.297598 GTTGAGCACACACACGCAC 60.298 57.895 0.00 0.00 0.00 5.34
6249 7219 1.743252 TTGAGCACACACACGCACA 60.743 52.632 0.00 0.00 0.00 4.57
6250 7220 1.976478 TTGAGCACACACACGCACAC 61.976 55.000 0.00 0.00 0.00 3.82
6251 7221 3.168237 GAGCACACACACGCACACC 62.168 63.158 0.00 0.00 0.00 4.16
6252 7222 4.250431 GCACACACACGCACACCC 62.250 66.667 0.00 0.00 0.00 4.61
6253 7223 3.935872 CACACACACGCACACCCG 61.936 66.667 0.00 0.00 0.00 5.28
6254 7224 4.150203 ACACACACGCACACCCGA 62.150 61.111 0.00 0.00 0.00 5.14
6255 7225 3.337889 CACACACGCACACCCGAG 61.338 66.667 0.00 0.00 0.00 4.63
6256 7226 3.845259 ACACACGCACACCCGAGT 61.845 61.111 0.00 0.00 32.39 4.18
6257 7227 2.587753 CACACGCACACCCGAGTT 60.588 61.111 0.00 0.00 29.82 3.01
6258 7228 1.300311 CACACGCACACCCGAGTTA 60.300 57.895 0.00 0.00 29.82 2.24
6259 7229 0.669318 CACACGCACACCCGAGTTAT 60.669 55.000 0.00 0.00 29.82 1.89
6260 7230 0.889994 ACACGCACACCCGAGTTATA 59.110 50.000 0.00 0.00 0.00 0.98
6261 7231 1.273048 ACACGCACACCCGAGTTATAA 59.727 47.619 0.00 0.00 0.00 0.98
6262 7232 1.924524 CACGCACACCCGAGTTATAAG 59.075 52.381 0.00 0.00 0.00 1.73
6263 7233 1.134907 ACGCACACCCGAGTTATAAGG 60.135 52.381 0.00 0.00 0.00 2.69
6264 7234 1.296727 GCACACCCGAGTTATAAGGC 58.703 55.000 0.00 0.00 0.00 4.35
6265 7235 1.949465 CACACCCGAGTTATAAGGCC 58.051 55.000 0.00 0.00 0.00 5.19
6266 7236 1.208535 CACACCCGAGTTATAAGGCCA 59.791 52.381 5.01 0.00 0.00 5.36
6267 7237 1.208776 ACACCCGAGTTATAAGGCCAC 59.791 52.381 5.01 0.00 0.00 5.01
6268 7238 1.208535 CACCCGAGTTATAAGGCCACA 59.791 52.381 5.01 0.00 0.00 4.17
6269 7239 2.124411 ACCCGAGTTATAAGGCCACAT 58.876 47.619 5.01 0.00 0.00 3.21
6270 7240 2.158813 ACCCGAGTTATAAGGCCACATG 60.159 50.000 5.01 0.00 0.00 3.21
6271 7241 1.873591 CCGAGTTATAAGGCCACATGC 59.126 52.381 5.01 0.00 40.16 4.06
6272 7242 2.560504 CGAGTTATAAGGCCACATGCA 58.439 47.619 5.01 0.00 43.89 3.96
6273 7243 2.545526 CGAGTTATAAGGCCACATGCAG 59.454 50.000 5.01 0.00 43.89 4.41
6274 7244 2.291741 GAGTTATAAGGCCACATGCAGC 59.708 50.000 5.01 0.00 43.89 5.25
6279 7249 4.073200 GGCCACATGCAGCCCAAC 62.073 66.667 14.33 0.00 43.76 3.77
6280 7250 3.304721 GCCACATGCAGCCCAACA 61.305 61.111 0.00 0.00 40.77 3.33
6281 7251 2.652530 CCACATGCAGCCCAACAC 59.347 61.111 0.00 0.00 0.00 3.32
6282 7252 2.201708 CCACATGCAGCCCAACACA 61.202 57.895 0.00 0.00 0.00 3.72
6283 7253 1.537814 CCACATGCAGCCCAACACAT 61.538 55.000 0.00 0.00 0.00 3.21
6284 7254 0.108992 CACATGCAGCCCAACACATC 60.109 55.000 0.00 0.00 0.00 3.06
6285 7255 1.252904 ACATGCAGCCCAACACATCC 61.253 55.000 0.00 0.00 0.00 3.51
6286 7256 1.077086 ATGCAGCCCAACACATCCA 59.923 52.632 0.00 0.00 0.00 3.41
6287 7257 1.252904 ATGCAGCCCAACACATCCAC 61.253 55.000 0.00 0.00 0.00 4.02
6288 7258 2.981560 GCAGCCCAACACATCCACG 61.982 63.158 0.00 0.00 0.00 4.94
6289 7259 2.034066 AGCCCAACACATCCACGG 59.966 61.111 0.00 0.00 0.00 4.94
6290 7260 3.747976 GCCCAACACATCCACGGC 61.748 66.667 0.00 0.00 0.00 5.68
6291 7261 3.061848 CCCAACACATCCACGGCC 61.062 66.667 0.00 0.00 0.00 6.13
6292 7262 2.034066 CCAACACATCCACGGCCT 59.966 61.111 0.00 0.00 0.00 5.19
6293 7263 1.298340 CCAACACATCCACGGCCTA 59.702 57.895 0.00 0.00 0.00 3.93
6294 7264 1.024579 CCAACACATCCACGGCCTAC 61.025 60.000 0.00 0.00 0.00 3.18
6307 7277 4.496670 CCTACGGCACTGCACTAC 57.503 61.111 2.82 0.00 0.00 2.73
6308 7278 1.890894 CCTACGGCACTGCACTACT 59.109 57.895 2.82 0.00 0.00 2.57
6309 7279 0.458543 CCTACGGCACTGCACTACTG 60.459 60.000 2.82 0.00 0.00 2.74
6310 7280 1.078759 CTACGGCACTGCACTACTGC 61.079 60.000 2.82 0.00 44.52 4.40
6311 7281 1.532604 TACGGCACTGCACTACTGCT 61.533 55.000 2.82 0.00 44.57 4.24
6312 7282 1.215382 CGGCACTGCACTACTGCTA 59.785 57.895 2.82 0.00 44.57 3.49
6313 7283 0.803768 CGGCACTGCACTACTGCTAG 60.804 60.000 2.82 0.00 44.57 3.42
6314 7284 0.247736 GGCACTGCACTACTGCTAGT 59.752 55.000 2.82 0.00 44.57 2.57
6315 7285 1.634702 GCACTGCACTACTGCTAGTC 58.365 55.000 0.00 0.00 44.57 2.59
6316 7286 1.737363 GCACTGCACTACTGCTAGTCC 60.737 57.143 0.00 0.00 44.57 3.85
6317 7287 1.546029 CACTGCACTACTGCTAGTCCA 59.454 52.381 0.00 0.00 44.57 4.02
6318 7288 1.546476 ACTGCACTACTGCTAGTCCAC 59.454 52.381 0.00 0.00 44.57 4.02
6319 7289 0.895530 TGCACTACTGCTAGTCCACC 59.104 55.000 0.00 0.00 44.57 4.61
6320 7290 1.187087 GCACTACTGCTAGTCCACCT 58.813 55.000 0.00 0.00 40.63 4.00
6321 7291 1.134965 GCACTACTGCTAGTCCACCTG 60.135 57.143 0.00 0.00 40.63 4.00
6322 7292 1.478510 CACTACTGCTAGTCCACCTGG 59.521 57.143 0.00 0.00 30.03 4.45
6323 7293 1.358103 ACTACTGCTAGTCCACCTGGA 59.642 52.381 0.00 0.00 43.08 3.86
6334 7304 2.615391 TCCACCTGGACACTTGTATCA 58.385 47.619 0.00 0.00 39.78 2.15
6335 7305 2.567169 TCCACCTGGACACTTGTATCAG 59.433 50.000 0.00 5.62 39.78 2.90
6336 7306 2.355108 CCACCTGGACACTTGTATCAGG 60.355 54.545 20.91 20.91 46.21 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 7.068962 TGCATCCATCATCTTTATGTTGTCATT 59.931 33.333 0.00 0.00 35.70 2.57
51 52 1.579429 GCCATCTTCCGCGTGTTTT 59.421 52.632 4.92 0.00 0.00 2.43
70 71 7.945033 TGTTCATTCTTTTAAACTTGCATCC 57.055 32.000 0.00 0.00 0.00 3.51
112 113 3.740321 GCATGAGGCGAAATAGAGAGAAG 59.260 47.826 0.00 0.00 0.00 2.85
242 248 4.594123 TGTGTTCGAGATAGGACAACAA 57.406 40.909 0.00 0.00 0.00 2.83
252 258 5.192927 AGAGAGAGAGATTGTGTTCGAGAT 58.807 41.667 0.00 0.00 0.00 2.75
253 259 4.584874 AGAGAGAGAGATTGTGTTCGAGA 58.415 43.478 0.00 0.00 0.00 4.04
254 260 4.201910 GGAGAGAGAGAGATTGTGTTCGAG 60.202 50.000 0.00 0.00 0.00 4.04
255 261 3.692101 GGAGAGAGAGAGATTGTGTTCGA 59.308 47.826 0.00 0.00 0.00 3.71
256 262 3.181491 GGGAGAGAGAGAGATTGTGTTCG 60.181 52.174 0.00 0.00 0.00 3.95
257 263 3.132111 GGGGAGAGAGAGAGATTGTGTTC 59.868 52.174 0.00 0.00 0.00 3.18
275 281 1.067749 CGTAACACACACACGGGGA 59.932 57.895 0.00 0.00 32.19 4.81
344 524 3.119637 GGGATCGGAAATTTTCTCGCAAA 60.120 43.478 8.93 0.00 0.00 3.68
345 525 2.422127 GGGATCGGAAATTTTCTCGCAA 59.578 45.455 8.93 0.00 0.00 4.85
347 527 1.333931 GGGGATCGGAAATTTTCTCGC 59.666 52.381 8.93 7.11 0.00 5.03
348 528 2.919228 AGGGGATCGGAAATTTTCTCG 58.081 47.619 8.93 10.38 0.00 4.04
349 529 5.037383 ACTAGGGGATCGGAAATTTTCTC 57.963 43.478 8.93 0.00 0.00 2.87
350 530 5.437946 GAACTAGGGGATCGGAAATTTTCT 58.562 41.667 8.93 0.00 0.00 2.52
351 531 4.272748 CGAACTAGGGGATCGGAAATTTTC 59.727 45.833 0.24 0.24 33.15 2.29
354 534 2.484947 GCGAACTAGGGGATCGGAAATT 60.485 50.000 10.20 0.00 37.08 1.82
356 536 0.462789 GCGAACTAGGGGATCGGAAA 59.537 55.000 10.20 0.00 37.08 3.13
357 537 0.396695 AGCGAACTAGGGGATCGGAA 60.397 55.000 10.20 0.00 37.08 4.30
358 538 0.475475 TAGCGAACTAGGGGATCGGA 59.525 55.000 10.20 0.00 37.08 4.55
359 539 1.325355 TTAGCGAACTAGGGGATCGG 58.675 55.000 10.20 0.00 37.08 4.18
360 540 2.361438 ACTTTAGCGAACTAGGGGATCG 59.639 50.000 0.00 0.00 39.47 3.69
361 541 3.383825 TGACTTTAGCGAACTAGGGGATC 59.616 47.826 0.00 0.00 0.00 3.36
364 544 3.604875 TTGACTTTAGCGAACTAGGGG 57.395 47.619 0.00 0.00 0.00 4.79
365 545 7.169982 CAGATAATTGACTTTAGCGAACTAGGG 59.830 40.741 0.00 0.00 0.00 3.53
366 546 7.169982 CCAGATAATTGACTTTAGCGAACTAGG 59.830 40.741 0.00 0.00 0.00 3.02
367 547 7.306866 GCCAGATAATTGACTTTAGCGAACTAG 60.307 40.741 0.00 0.00 0.00 2.57
369 549 5.294552 GCCAGATAATTGACTTTAGCGAACT 59.705 40.000 0.00 0.00 0.00 3.01
370 550 5.502606 GCCAGATAATTGACTTTAGCGAAC 58.497 41.667 0.00 0.00 0.00 3.95
372 552 3.802139 CGCCAGATAATTGACTTTAGCGA 59.198 43.478 0.00 0.00 42.20 4.93
373 553 3.802139 TCGCCAGATAATTGACTTTAGCG 59.198 43.478 0.00 0.00 41.07 4.26
374 554 5.931441 ATCGCCAGATAATTGACTTTAGC 57.069 39.130 0.00 0.00 34.85 3.09
375 555 7.655328 AGAGAATCGCCAGATAATTGACTTTAG 59.345 37.037 0.00 0.00 42.67 1.85
376 556 7.500992 AGAGAATCGCCAGATAATTGACTTTA 58.499 34.615 0.00 0.00 42.67 1.85
377 557 6.352516 AGAGAATCGCCAGATAATTGACTTT 58.647 36.000 0.00 0.00 42.67 2.66
378 558 5.923204 AGAGAATCGCCAGATAATTGACTT 58.077 37.500 0.00 0.00 42.67 3.01
379 559 5.543507 AGAGAATCGCCAGATAATTGACT 57.456 39.130 0.00 0.00 42.67 3.41
380 560 5.755375 TCAAGAGAATCGCCAGATAATTGAC 59.245 40.000 0.00 0.00 42.67 3.18
390 570 3.825143 TCATCATCAAGAGAATCGCCA 57.175 42.857 0.00 0.00 42.67 5.69
453 633 7.197071 TGCATATAGTAAACGGCCTTAAATG 57.803 36.000 0.00 0.00 0.00 2.32
501 681 4.456566 TCAACCAAAAACGTATTCTAGCCC 59.543 41.667 0.00 0.00 0.00 5.19
504 684 6.796705 ACCTCAACCAAAAACGTATTCTAG 57.203 37.500 0.00 0.00 0.00 2.43
522 703 7.566569 TGGTATCAAAACCGAATTATACCTCA 58.433 34.615 0.00 0.00 42.91 3.86
561 950 9.597170 GGGGTAATAATTAAGATCGGATTACTC 57.403 37.037 0.00 0.00 32.73 2.59
563 952 8.323567 TGGGGGTAATAATTAAGATCGGATTAC 58.676 37.037 0.00 0.00 0.00 1.89
572 961 7.523415 GTCCAGATTGGGGGTAATAATTAAGA 58.477 38.462 0.00 0.00 38.32 2.10
583 976 3.728373 GCCGTCCAGATTGGGGGT 61.728 66.667 7.58 0.00 38.32 4.95
584 977 3.411517 AGCCGTCCAGATTGGGGG 61.412 66.667 0.00 0.00 38.32 5.40
585 978 2.124570 CAGCCGTCCAGATTGGGG 60.125 66.667 0.00 0.00 38.32 4.96
586 979 2.124570 CCAGCCGTCCAGATTGGG 60.125 66.667 0.00 0.00 38.32 4.12
587 980 1.746615 CACCAGCCGTCCAGATTGG 60.747 63.158 0.00 0.00 39.43 3.16
588 981 0.107508 ATCACCAGCCGTCCAGATTG 60.108 55.000 0.00 0.00 0.00 2.67
593 1186 0.608035 GGAAAATCACCAGCCGTCCA 60.608 55.000 0.00 0.00 0.00 4.02
595 1188 0.804989 CTGGAAAATCACCAGCCGTC 59.195 55.000 0.00 0.00 46.30 4.79
601 1194 3.383185 GGAAACACACTGGAAAATCACCA 59.617 43.478 0.00 0.00 35.96 4.17
764 1359 2.570582 GAAGGCGACTCTGGCTCTGG 62.571 65.000 0.00 0.00 45.07 3.86
765 1360 1.153667 GAAGGCGACTCTGGCTCTG 60.154 63.158 0.00 0.00 45.07 3.35
766 1361 2.355193 GGAAGGCGACTCTGGCTCT 61.355 63.158 0.00 0.00 45.07 4.09
767 1362 1.038130 TAGGAAGGCGACTCTGGCTC 61.038 60.000 0.00 0.00 45.07 4.70
769 1364 0.466124 ATTAGGAAGGCGACTCTGGC 59.534 55.000 0.00 0.00 42.68 4.85
770 1365 1.069358 GGATTAGGAAGGCGACTCTGG 59.931 57.143 0.00 0.00 42.68 3.86
809 1408 0.179043 GGGAGAAGCCGAGGATTTCC 60.179 60.000 10.66 10.66 37.63 3.13
810 1409 0.530870 CGGGAGAAGCCGAGGATTTC 60.531 60.000 0.00 0.00 37.63 2.17
850 1449 0.178533 CGGGTTTTATAGGCACGGGA 59.821 55.000 0.00 0.00 0.00 5.14
900 1514 1.068055 GCAGAGGATTGTTGTTGCTGG 60.068 52.381 0.00 0.00 0.00 4.85
903 1517 3.671702 GCTAAGCAGAGGATTGTTGTTGC 60.672 47.826 0.00 0.00 0.00 4.17
907 1521 2.715046 TGGCTAAGCAGAGGATTGTTG 58.285 47.619 0.00 0.00 0.00 3.33
908 1522 3.549794 GATGGCTAAGCAGAGGATTGTT 58.450 45.455 0.00 0.00 0.00 2.83
909 1523 2.484417 CGATGGCTAAGCAGAGGATTGT 60.484 50.000 0.00 0.00 0.00 2.71
927 1542 1.535202 GGAGGAGGATGAGGCCGAT 60.535 63.158 0.00 0.00 0.00 4.18
931 1546 2.146061 CAGGGGAGGAGGATGAGGC 61.146 68.421 0.00 0.00 0.00 4.70
980 1598 2.251667 CTACGGCGCTAGGCTACG 59.748 66.667 6.90 2.29 42.94 3.51
981 1599 2.050259 GCTACGGCGCTAGGCTAC 60.050 66.667 6.90 0.00 42.94 3.58
982 1600 3.292936 GGCTACGGCGCTAGGCTA 61.293 66.667 24.58 0.00 42.94 3.93
984 1602 4.301027 ATGGCTACGGCGCTAGGC 62.301 66.667 24.88 24.88 39.28 3.93
992 1610 1.024579 GTTCACCACCATGGCTACGG 61.025 60.000 13.04 10.12 42.67 4.02
993 1611 0.321210 TGTTCACCACCATGGCTACG 60.321 55.000 13.04 0.00 42.67 3.51
994 1612 1.539827 GTTGTTCACCACCATGGCTAC 59.460 52.381 13.04 1.70 42.67 3.58
995 1613 1.143889 TGTTGTTCACCACCATGGCTA 59.856 47.619 13.04 0.00 42.67 3.93
1020 1650 3.379445 TCGAACGCCAGGGTCTCC 61.379 66.667 0.00 0.00 0.00 3.71
1475 2112 0.322456 CCTCGCCATGGACCAGAAAA 60.322 55.000 18.40 0.00 0.00 2.29
1476 2113 1.299648 CCTCGCCATGGACCAGAAA 59.700 57.895 18.40 0.00 0.00 2.52
1494 2131 3.969802 GCTGGCGGCCATGTATGC 61.970 66.667 24.10 18.11 30.82 3.14
1495 2132 2.203252 AGCTGGCGGCCATGTATG 60.203 61.111 24.10 11.66 43.05 2.39
1522 2159 5.350640 AGGAAAGAAATTAATGTCGACCGAC 59.649 40.000 14.12 14.88 44.77 4.79
1665 2308 4.196193 TCGTCAATCGCCCATTAATTTCT 58.804 39.130 0.00 0.00 39.67 2.52
1678 2321 1.731709 TGCCAACAATCTCGTCAATCG 59.268 47.619 0.00 0.00 41.41 3.34
1920 2563 2.223386 GGAGAGGAAGTCGACGATGAAG 60.223 54.545 10.46 0.00 0.00 3.02
2148 2791 2.498885 AGGTGGTGGGTAACTTACGATC 59.501 50.000 0.00 0.00 0.00 3.69
2182 2841 4.294416 ACACTGTGCTATTAGCTAGACG 57.706 45.455 20.12 14.67 42.97 4.18
2191 2850 7.524717 AATTGGAACTAAACACTGTGCTATT 57.475 32.000 7.90 3.67 0.00 1.73
2427 3117 7.398618 TGCCCATGGTCAAATAATTCTAGAAAA 59.601 33.333 9.71 1.10 0.00 2.29
2831 3551 7.118971 CCAAGCTATTAGCCATGTTCTCTAATC 59.881 40.741 12.05 0.79 43.77 1.75
2925 3645 6.372937 GCAAGTCTAAAAGCTCTTGTTAGGAT 59.627 38.462 11.05 0.00 39.28 3.24
3066 3789 0.388134 GCATGTGCTCAAGTGCCAAG 60.388 55.000 3.50 0.00 38.21 3.61
3137 3865 3.747854 TGCTGATTTGTTTGCATGGAA 57.252 38.095 0.00 0.00 0.00 3.53
3139 3867 4.330620 GGTATTGCTGATTTGTTTGCATGG 59.669 41.667 0.00 0.00 35.27 3.66
3143 3871 7.809806 GGATATAGGTATTGCTGATTTGTTTGC 59.190 37.037 0.00 0.00 0.00 3.68
3156 3884 8.097662 GTGAAGGAGAAAGGGATATAGGTATTG 58.902 40.741 0.00 0.00 0.00 1.90
3158 3886 7.313731 TGTGAAGGAGAAAGGGATATAGGTAT 58.686 38.462 0.00 0.00 0.00 2.73
3161 3889 6.500589 TTGTGAAGGAGAAAGGGATATAGG 57.499 41.667 0.00 0.00 0.00 2.57
3165 3893 5.010282 GCTTTTGTGAAGGAGAAAGGGATA 58.990 41.667 0.00 0.00 31.49 2.59
3166 3894 3.829026 GCTTTTGTGAAGGAGAAAGGGAT 59.171 43.478 0.00 0.00 31.49 3.85
3188 3916 1.581934 TTGCTGAGGAAACAGTGACG 58.418 50.000 0.00 0.00 39.73 4.35
3213 3943 8.439971 TGGTATGACTGAATCTTTAATATGCCT 58.560 33.333 0.00 0.00 0.00 4.75
3465 4198 5.368989 AGACCAAATTCGATACATTCTCCC 58.631 41.667 0.00 0.00 0.00 4.30
3507 4240 3.440522 GGAAAGATTGTGACCAACTAGCC 59.559 47.826 0.00 0.00 32.26 3.93
3814 4676 5.238868 ACATCTGCTTGCTATTGCTGAATAG 59.761 40.000 0.00 0.00 42.84 1.73
3815 4677 5.128205 ACATCTGCTTGCTATTGCTGAATA 58.872 37.500 0.00 0.00 39.75 1.75
3844 4709 5.363580 ACAAGGAGGAAAAATGTGTGATTGT 59.636 36.000 0.00 0.00 0.00 2.71
3860 4725 2.676463 GCTCTGCAGAAGTACAAGGAGG 60.676 54.545 18.85 2.27 0.00 4.30
3893 4759 0.955919 CCGACACCCAGAAAAGCCTC 60.956 60.000 0.00 0.00 0.00 4.70
3948 4814 3.387374 CCTCTGCACAAGTAGGAGATGAT 59.613 47.826 0.00 0.00 32.88 2.45
4085 4951 2.050691 CGACAAAGACGGCATTTTTGG 58.949 47.619 6.44 0.00 36.41 3.28
4306 5173 4.687483 CCTGCAACATTCAAGGACAAAATC 59.313 41.667 0.00 0.00 0.00 2.17
4307 5174 4.344679 TCCTGCAACATTCAAGGACAAAAT 59.655 37.500 0.00 0.00 0.00 1.82
4309 5176 3.295093 TCCTGCAACATTCAAGGACAAA 58.705 40.909 0.00 0.00 0.00 2.83
4314 5181 1.180029 CCCTCCTGCAACATTCAAGG 58.820 55.000 0.00 0.00 0.00 3.61
4315 5182 1.180029 CCCCTCCTGCAACATTCAAG 58.820 55.000 0.00 0.00 0.00 3.02
4541 5408 1.703438 GCATCAGGAAGAGCAGCGTG 61.703 60.000 0.00 0.00 0.00 5.34
5036 5907 6.806249 TGGCGATCTTTTAATTTAGTTTGCAG 59.194 34.615 0.00 0.00 0.00 4.41
5108 5982 0.387622 CACCGCTGCAATCAACCAAG 60.388 55.000 0.00 0.00 0.00 3.61
5112 5986 1.154413 CGTCACCGCTGCAATCAAC 60.154 57.895 0.00 0.00 0.00 3.18
5398 6280 7.341030 TCTGCATCCTGATTAATTCTTCTTCA 58.659 34.615 0.00 0.00 0.00 3.02
5428 6359 4.096681 ACACTAATCACTCCATCTGACCA 58.903 43.478 0.00 0.00 0.00 4.02
5430 6361 6.276847 CCTTACACTAATCACTCCATCTGAC 58.723 44.000 0.00 0.00 0.00 3.51
5432 6363 5.053145 GCCTTACACTAATCACTCCATCTG 58.947 45.833 0.00 0.00 0.00 2.90
5433 6364 4.101741 GGCCTTACACTAATCACTCCATCT 59.898 45.833 0.00 0.00 0.00 2.90
5435 6366 3.181465 CGGCCTTACACTAATCACTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
5437 6368 2.483188 CCGGCCTTACACTAATCACTCC 60.483 54.545 0.00 0.00 0.00 3.85
5438 6369 2.429610 TCCGGCCTTACACTAATCACTC 59.570 50.000 0.00 0.00 0.00 3.51
5439 6370 2.463752 TCCGGCCTTACACTAATCACT 58.536 47.619 0.00 0.00 0.00 3.41
5440 6371 2.973694 TCCGGCCTTACACTAATCAC 57.026 50.000 0.00 0.00 0.00 3.06
5441 6372 5.362263 GTTATTCCGGCCTTACACTAATCA 58.638 41.667 0.00 0.00 0.00 2.57
5442 6373 4.446719 CGTTATTCCGGCCTTACACTAATC 59.553 45.833 0.00 0.00 0.00 1.75
5443 6374 4.374399 CGTTATTCCGGCCTTACACTAAT 58.626 43.478 0.00 0.00 0.00 1.73
5444 6375 3.430651 CCGTTATTCCGGCCTTACACTAA 60.431 47.826 0.00 0.00 41.78 2.24
5445 6376 2.101249 CCGTTATTCCGGCCTTACACTA 59.899 50.000 0.00 0.00 41.78 2.74
5446 6377 1.134610 CCGTTATTCCGGCCTTACACT 60.135 52.381 0.00 0.00 41.78 3.55
5447 6378 1.292992 CCGTTATTCCGGCCTTACAC 58.707 55.000 0.00 0.00 41.78 2.90
5448 6379 3.764658 CCGTTATTCCGGCCTTACA 57.235 52.632 0.00 0.00 41.78 2.41
5490 6421 1.996798 AACCTCTTCTCCACAGACGA 58.003 50.000 0.00 0.00 0.00 4.20
5492 6423 5.153950 ACATAAACCTCTTCTCCACAGAC 57.846 43.478 0.00 0.00 0.00 3.51
5493 6424 5.825593 AACATAAACCTCTTCTCCACAGA 57.174 39.130 0.00 0.00 0.00 3.41
5495 6426 7.013274 CAGAAAAACATAAACCTCTTCTCCACA 59.987 37.037 0.00 0.00 0.00 4.17
5519 6450 6.660949 AGGGGTACATTTTTCTTCTTCATCAG 59.339 38.462 0.00 0.00 0.00 2.90
5520 6451 6.552008 AGGGGTACATTTTTCTTCTTCATCA 58.448 36.000 0.00 0.00 0.00 3.07
5528 6461 6.252995 TGCTGATTAGGGGTACATTTTTCTT 58.747 36.000 0.00 0.00 0.00 2.52
5529 6462 5.826643 TGCTGATTAGGGGTACATTTTTCT 58.173 37.500 0.00 0.00 0.00 2.52
5530 6463 6.507023 CATGCTGATTAGGGGTACATTTTTC 58.493 40.000 0.00 0.00 0.00 2.29
5531 6464 5.163416 GCATGCTGATTAGGGGTACATTTTT 60.163 40.000 11.37 0.00 0.00 1.94
5580 6519 5.817296 TGATTACATCTGCATCACCTTACAC 59.183 40.000 0.00 0.00 0.00 2.90
5673 6615 2.428530 GACTCGTAGGGGATTTACCGTT 59.571 50.000 0.00 0.00 40.11 4.44
5688 6630 1.358152 TGAGGGGGATTTTGACTCGT 58.642 50.000 0.00 0.00 0.00 4.18
5742 6684 2.833943 GGGATTCATTCAGGCCTTGTTT 59.166 45.455 0.00 0.00 0.00 2.83
5749 6691 1.605710 CATCGTGGGATTCATTCAGGC 59.394 52.381 0.00 0.00 0.00 4.85
5752 6694 2.416680 TGCATCGTGGGATTCATTCA 57.583 45.000 0.00 0.00 0.00 2.57
5756 6698 1.957668 CTCATGCATCGTGGGATTCA 58.042 50.000 0.00 0.00 30.44 2.57
5761 6703 0.534427 ATGAGCTCATGCATCGTGGG 60.534 55.000 28.21 0.00 42.74 4.61
5765 6707 4.271776 TGACTTTTATGAGCTCATGCATCG 59.728 41.667 34.48 21.32 42.74 3.84
5766 6708 5.746307 TGACTTTTATGAGCTCATGCATC 57.254 39.130 34.48 23.59 42.74 3.91
5805 6769 4.196193 CCCTACAAGTTGATATTTGGCGA 58.804 43.478 10.54 0.00 0.00 5.54
5806 6770 3.315191 CCCCTACAAGTTGATATTTGGCG 59.685 47.826 10.54 0.00 0.00 5.69
5807 6771 3.068165 GCCCCTACAAGTTGATATTTGGC 59.932 47.826 10.54 9.58 0.00 4.52
5809 6773 4.202050 GCTGCCCCTACAAGTTGATATTTG 60.202 45.833 10.54 0.00 0.00 2.32
5810 6774 3.954258 GCTGCCCCTACAAGTTGATATTT 59.046 43.478 10.54 0.00 0.00 1.40
5811 6775 3.053693 TGCTGCCCCTACAAGTTGATATT 60.054 43.478 10.54 0.00 0.00 1.28
5812 6776 2.509548 TGCTGCCCCTACAAGTTGATAT 59.490 45.455 10.54 0.00 0.00 1.63
5813 6777 1.912731 TGCTGCCCCTACAAGTTGATA 59.087 47.619 10.54 0.00 0.00 2.15
5814 6778 0.698238 TGCTGCCCCTACAAGTTGAT 59.302 50.000 10.54 0.00 0.00 2.57
5815 6779 0.036732 CTGCTGCCCCTACAAGTTGA 59.963 55.000 10.54 0.00 0.00 3.18
5816 6780 0.962356 CCTGCTGCCCCTACAAGTTG 60.962 60.000 0.00 0.00 0.00 3.16
5817 6781 1.380302 CCTGCTGCCCCTACAAGTT 59.620 57.895 0.00 0.00 0.00 2.66
5818 6782 3.081554 CCTGCTGCCCCTACAAGT 58.918 61.111 0.00 0.00 0.00 3.16
5819 6783 2.439156 GCCTGCTGCCCCTACAAG 60.439 66.667 0.00 0.00 0.00 3.16
5837 6801 4.342359 GGAGACCTAGTTAGTCCTTGTCA 58.658 47.826 0.00 0.00 34.67 3.58
5877 6841 4.316205 TTTCCGAAAAAGAAAAGAGGCC 57.684 40.909 0.00 0.00 30.48 5.19
5894 6858 7.351981 GTGACAATTGGCAATTAACTTTTTCC 58.648 34.615 23.93 0.00 32.99 3.13
5904 6868 3.451141 AACACGTGACAATTGGCAATT 57.549 38.095 25.01 19.39 32.99 2.32
5971 6936 1.452108 CCCCCATTCCTCTTCGCAC 60.452 63.158 0.00 0.00 0.00 5.34
5974 6939 0.181350 CCTTCCCCCATTCCTCTTCG 59.819 60.000 0.00 0.00 0.00 3.79
5989 6954 2.028020 TCGCCTTCTCTTTCCTTCCTTC 60.028 50.000 0.00 0.00 0.00 3.46
6018 6983 2.159517 GCACTCAACTTTGCCTTATCGG 60.160 50.000 0.00 0.00 32.21 4.18
6080 7050 2.425143 AGGGTTACTCGGTCGTCATA 57.575 50.000 0.00 0.00 0.00 2.15
6081 7051 2.092753 TCTAGGGTTACTCGGTCGTCAT 60.093 50.000 0.00 0.00 0.00 3.06
6082 7052 1.278985 TCTAGGGTTACTCGGTCGTCA 59.721 52.381 0.00 0.00 0.00 4.35
6083 7053 2.029838 TCTAGGGTTACTCGGTCGTC 57.970 55.000 0.00 0.00 0.00 4.20
6084 7054 2.496899 TTCTAGGGTTACTCGGTCGT 57.503 50.000 0.00 0.00 0.00 4.34
6085 7055 2.098770 CCTTTCTAGGGTTACTCGGTCG 59.901 54.545 0.00 0.00 37.94 4.79
6086 7056 3.797451 CCTTTCTAGGGTTACTCGGTC 57.203 52.381 0.00 0.00 37.94 4.79
6097 7067 3.257127 GTGAGATCGATCCCCTTTCTAGG 59.743 52.174 21.66 0.00 41.60 3.02
6098 7068 3.057876 CGTGAGATCGATCCCCTTTCTAG 60.058 52.174 21.66 7.04 0.00 2.43
6099 7069 2.885266 CGTGAGATCGATCCCCTTTCTA 59.115 50.000 21.66 1.59 0.00 2.10
6100 7070 1.683917 CGTGAGATCGATCCCCTTTCT 59.316 52.381 21.66 1.51 0.00 2.52
6101 7071 1.409427 ACGTGAGATCGATCCCCTTTC 59.591 52.381 21.66 12.57 34.70 2.62
6102 7072 1.137086 CACGTGAGATCGATCCCCTTT 59.863 52.381 21.66 2.52 34.70 3.11
6103 7073 0.747255 CACGTGAGATCGATCCCCTT 59.253 55.000 21.66 2.94 34.70 3.95
6104 7074 0.106669 TCACGTGAGATCGATCCCCT 60.107 55.000 21.66 3.34 34.70 4.79
6105 7075 0.312416 CTCACGTGAGATCGATCCCC 59.688 60.000 36.73 14.16 44.74 4.81
6106 7076 1.309950 TCTCACGTGAGATCGATCCC 58.690 55.000 37.87 11.16 45.48 3.85
6115 7085 1.406069 CCCCAATTCCTCTCACGTGAG 60.406 57.143 34.76 34.76 43.36 3.51
6116 7086 0.613260 CCCCAATTCCTCTCACGTGA 59.387 55.000 18.88 18.88 0.00 4.35
6117 7087 0.613260 TCCCCAATTCCTCTCACGTG 59.387 55.000 9.94 9.94 0.00 4.49
6118 7088 1.210478 CATCCCCAATTCCTCTCACGT 59.790 52.381 0.00 0.00 0.00 4.49
6119 7089 1.486310 TCATCCCCAATTCCTCTCACG 59.514 52.381 0.00 0.00 0.00 4.35
6120 7090 2.158696 CCTCATCCCCAATTCCTCTCAC 60.159 54.545 0.00 0.00 0.00 3.51
6121 7091 2.130193 CCTCATCCCCAATTCCTCTCA 58.870 52.381 0.00 0.00 0.00 3.27
6122 7092 2.371510 CTCCTCATCCCCAATTCCTCTC 59.628 54.545 0.00 0.00 0.00 3.20
6123 7093 2.021639 TCTCCTCATCCCCAATTCCTCT 60.022 50.000 0.00 0.00 0.00 3.69
6124 7094 2.371510 CTCTCCTCATCCCCAATTCCTC 59.628 54.545 0.00 0.00 0.00 3.71
6125 7095 2.416638 CTCTCCTCATCCCCAATTCCT 58.583 52.381 0.00 0.00 0.00 3.36
6126 7096 1.423161 CCTCTCCTCATCCCCAATTCC 59.577 57.143 0.00 0.00 0.00 3.01
6127 7097 2.371510 CTCCTCTCCTCATCCCCAATTC 59.628 54.545 0.00 0.00 0.00 2.17
6128 7098 2.416638 CTCCTCTCCTCATCCCCAATT 58.583 52.381 0.00 0.00 0.00 2.32
6129 7099 2.044469 GCTCCTCTCCTCATCCCCAAT 61.044 57.143 0.00 0.00 0.00 3.16
6130 7100 0.692419 GCTCCTCTCCTCATCCCCAA 60.692 60.000 0.00 0.00 0.00 4.12
6131 7101 1.074926 GCTCCTCTCCTCATCCCCA 60.075 63.158 0.00 0.00 0.00 4.96
6132 7102 1.074926 TGCTCCTCTCCTCATCCCC 60.075 63.158 0.00 0.00 0.00 4.81
6133 7103 1.120795 CCTGCTCCTCTCCTCATCCC 61.121 65.000 0.00 0.00 0.00 3.85
6134 7104 0.398381 ACCTGCTCCTCTCCTCATCC 60.398 60.000 0.00 0.00 0.00 3.51
6135 7105 2.238521 CTACCTGCTCCTCTCCTCATC 58.761 57.143 0.00 0.00 0.00 2.92
6136 7106 1.133199 CCTACCTGCTCCTCTCCTCAT 60.133 57.143 0.00 0.00 0.00 2.90
6137 7107 0.260230 CCTACCTGCTCCTCTCCTCA 59.740 60.000 0.00 0.00 0.00 3.86
6138 7108 0.260523 ACCTACCTGCTCCTCTCCTC 59.739 60.000 0.00 0.00 0.00 3.71
6139 7109 0.032615 CACCTACCTGCTCCTCTCCT 60.033 60.000 0.00 0.00 0.00 3.69
6140 7110 0.033011 TCACCTACCTGCTCCTCTCC 60.033 60.000 0.00 0.00 0.00 3.71
6141 7111 1.107945 GTCACCTACCTGCTCCTCTC 58.892 60.000 0.00 0.00 0.00 3.20
6142 7112 0.409876 TGTCACCTACCTGCTCCTCT 59.590 55.000 0.00 0.00 0.00 3.69
6143 7113 1.490574 ATGTCACCTACCTGCTCCTC 58.509 55.000 0.00 0.00 0.00 3.71
6144 7114 2.245028 TCTATGTCACCTACCTGCTCCT 59.755 50.000 0.00 0.00 0.00 3.69
6145 7115 2.362717 GTCTATGTCACCTACCTGCTCC 59.637 54.545 0.00 0.00 0.00 4.70
6146 7116 2.033550 CGTCTATGTCACCTACCTGCTC 59.966 54.545 0.00 0.00 0.00 4.26
6147 7117 2.025155 CGTCTATGTCACCTACCTGCT 58.975 52.381 0.00 0.00 0.00 4.24
6148 7118 2.022195 TCGTCTATGTCACCTACCTGC 58.978 52.381 0.00 0.00 0.00 4.85
6149 7119 3.945921 TCTTCGTCTATGTCACCTACCTG 59.054 47.826 0.00 0.00 0.00 4.00
6150 7120 4.080469 TCTCTTCGTCTATGTCACCTACCT 60.080 45.833 0.00 0.00 0.00 3.08
6151 7121 4.197750 TCTCTTCGTCTATGTCACCTACC 58.802 47.826 0.00 0.00 0.00 3.18
6152 7122 4.273969 CCTCTCTTCGTCTATGTCACCTAC 59.726 50.000 0.00 0.00 0.00 3.18
6153 7123 4.080469 ACCTCTCTTCGTCTATGTCACCTA 60.080 45.833 0.00 0.00 0.00 3.08
6154 7124 3.283751 CCTCTCTTCGTCTATGTCACCT 58.716 50.000 0.00 0.00 0.00 4.00
6155 7125 3.018149 ACCTCTCTTCGTCTATGTCACC 58.982 50.000 0.00 0.00 0.00 4.02
6156 7126 3.690139 TCACCTCTCTTCGTCTATGTCAC 59.310 47.826 0.00 0.00 0.00 3.67
6157 7127 3.942115 CTCACCTCTCTTCGTCTATGTCA 59.058 47.826 0.00 0.00 0.00 3.58
6158 7128 4.193090 TCTCACCTCTCTTCGTCTATGTC 58.807 47.826 0.00 0.00 0.00 3.06
6159 7129 4.223556 TCTCACCTCTCTTCGTCTATGT 57.776 45.455 0.00 0.00 0.00 2.29
6160 7130 5.766150 ATTCTCACCTCTCTTCGTCTATG 57.234 43.478 0.00 0.00 0.00 2.23
6161 7131 8.472007 AATTATTCTCACCTCTCTTCGTCTAT 57.528 34.615 0.00 0.00 0.00 1.98
6162 7132 7.556635 TGAATTATTCTCACCTCTCTTCGTCTA 59.443 37.037 6.50 0.00 0.00 2.59
6163 7133 6.378564 TGAATTATTCTCACCTCTCTTCGTCT 59.621 38.462 6.50 0.00 0.00 4.18
6164 7134 6.565234 TGAATTATTCTCACCTCTCTTCGTC 58.435 40.000 6.50 0.00 0.00 4.20
6165 7135 6.378564 TCTGAATTATTCTCACCTCTCTTCGT 59.621 38.462 6.50 0.00 0.00 3.85
6166 7136 6.800543 TCTGAATTATTCTCACCTCTCTTCG 58.199 40.000 6.50 0.00 0.00 3.79
6167 7137 7.781056 ACTCTGAATTATTCTCACCTCTCTTC 58.219 38.462 6.50 0.00 0.00 2.87
6168 7138 7.732222 ACTCTGAATTATTCTCACCTCTCTT 57.268 36.000 6.50 0.00 0.00 2.85
6169 7139 7.732222 AACTCTGAATTATTCTCACCTCTCT 57.268 36.000 6.50 0.00 0.00 3.10
6170 7140 9.691362 GATAACTCTGAATTATTCTCACCTCTC 57.309 37.037 6.50 0.00 0.00 3.20
6171 7141 9.432982 AGATAACTCTGAATTATTCTCACCTCT 57.567 33.333 6.50 0.00 0.00 3.69
6185 7155 9.877178 GAGGACAAGAAATAAGATAACTCTGAA 57.123 33.333 0.00 0.00 0.00 3.02
6186 7156 8.478877 GGAGGACAAGAAATAAGATAACTCTGA 58.521 37.037 0.00 0.00 0.00 3.27
6187 7157 8.482128 AGGAGGACAAGAAATAAGATAACTCTG 58.518 37.037 0.00 0.00 0.00 3.35
6188 7158 8.616799 AGGAGGACAAGAAATAAGATAACTCT 57.383 34.615 0.00 0.00 0.00 3.24
6189 7159 8.700973 AGAGGAGGACAAGAAATAAGATAACTC 58.299 37.037 0.00 0.00 0.00 3.01
6190 7160 8.482128 CAGAGGAGGACAAGAAATAAGATAACT 58.518 37.037 0.00 0.00 0.00 2.24
6191 7161 8.261522 ACAGAGGAGGACAAGAAATAAGATAAC 58.738 37.037 0.00 0.00 0.00 1.89
6192 7162 8.380742 ACAGAGGAGGACAAGAAATAAGATAA 57.619 34.615 0.00 0.00 0.00 1.75
6193 7163 7.841729 AGACAGAGGAGGACAAGAAATAAGATA 59.158 37.037 0.00 0.00 0.00 1.98
6194 7164 6.671779 AGACAGAGGAGGACAAGAAATAAGAT 59.328 38.462 0.00 0.00 0.00 2.40
6195 7165 6.019748 AGACAGAGGAGGACAAGAAATAAGA 58.980 40.000 0.00 0.00 0.00 2.10
6196 7166 6.293004 AGACAGAGGAGGACAAGAAATAAG 57.707 41.667 0.00 0.00 0.00 1.73
6197 7167 5.105716 CGAGACAGAGGAGGACAAGAAATAA 60.106 44.000 0.00 0.00 0.00 1.40
6198 7168 4.399618 CGAGACAGAGGAGGACAAGAAATA 59.600 45.833 0.00 0.00 0.00 1.40
6199 7169 3.194542 CGAGACAGAGGAGGACAAGAAAT 59.805 47.826 0.00 0.00 0.00 2.17
6200 7170 2.558795 CGAGACAGAGGAGGACAAGAAA 59.441 50.000 0.00 0.00 0.00 2.52
6201 7171 2.163509 CGAGACAGAGGAGGACAAGAA 58.836 52.381 0.00 0.00 0.00 2.52
6202 7172 1.074084 ACGAGACAGAGGAGGACAAGA 59.926 52.381 0.00 0.00 0.00 3.02
6203 7173 1.540267 ACGAGACAGAGGAGGACAAG 58.460 55.000 0.00 0.00 0.00 3.16
6204 7174 2.434428 GTACGAGACAGAGGAGGACAA 58.566 52.381 0.00 0.00 0.00 3.18
6205 7175 1.675116 CGTACGAGACAGAGGAGGACA 60.675 57.143 10.44 0.00 0.00 4.02
6206 7176 1.008329 CGTACGAGACAGAGGAGGAC 58.992 60.000 10.44 0.00 0.00 3.85
6207 7177 0.743701 GCGTACGAGACAGAGGAGGA 60.744 60.000 21.65 0.00 0.00 3.71
6208 7178 1.025113 TGCGTACGAGACAGAGGAGG 61.025 60.000 21.65 0.00 0.00 4.30
6209 7179 0.375454 CTGCGTACGAGACAGAGGAG 59.625 60.000 21.65 0.00 33.10 3.69
6210 7180 1.025113 CCTGCGTACGAGACAGAGGA 61.025 60.000 21.65 0.00 33.10 3.71
6211 7181 1.429825 CCTGCGTACGAGACAGAGG 59.570 63.158 21.65 9.21 33.10 3.69
6212 7182 1.306642 ACCCTGCGTACGAGACAGAG 61.307 60.000 21.65 10.28 33.10 3.35
6213 7183 0.892358 AACCCTGCGTACGAGACAGA 60.892 55.000 21.65 0.00 33.10 3.41
6214 7184 0.732880 CAACCCTGCGTACGAGACAG 60.733 60.000 21.65 16.28 0.00 3.51
6215 7185 1.174078 TCAACCCTGCGTACGAGACA 61.174 55.000 21.65 6.67 0.00 3.41
6216 7186 0.456312 CTCAACCCTGCGTACGAGAC 60.456 60.000 21.65 1.31 0.00 3.36
6217 7187 1.880894 CTCAACCCTGCGTACGAGA 59.119 57.895 21.65 3.04 0.00 4.04
6218 7188 1.805945 GCTCAACCCTGCGTACGAG 60.806 63.158 21.65 13.11 0.00 4.18
6219 7189 2.260434 GCTCAACCCTGCGTACGA 59.740 61.111 21.65 3.19 0.00 3.43
6220 7190 2.048597 TGCTCAACCCTGCGTACG 60.049 61.111 11.84 11.84 0.00 3.67
6221 7191 1.301401 TGTGCTCAACCCTGCGTAC 60.301 57.895 0.00 0.00 0.00 3.67
6222 7192 1.301401 GTGTGCTCAACCCTGCGTA 60.301 57.895 0.00 0.00 0.00 4.42
6223 7193 2.591715 GTGTGCTCAACCCTGCGT 60.592 61.111 0.00 0.00 0.00 5.24
6224 7194 2.591429 TGTGTGCTCAACCCTGCG 60.591 61.111 0.00 0.00 0.00 5.18
6225 7195 1.823470 TGTGTGTGCTCAACCCTGC 60.823 57.895 0.00 0.00 0.00 4.85
6226 7196 1.775039 CGTGTGTGTGCTCAACCCTG 61.775 60.000 0.00 0.00 0.00 4.45
6227 7197 1.523711 CGTGTGTGTGCTCAACCCT 60.524 57.895 0.00 0.00 0.00 4.34
6228 7198 3.022287 CGTGTGTGTGCTCAACCC 58.978 61.111 0.00 0.00 0.00 4.11
6229 7199 2.327940 GCGTGTGTGTGCTCAACC 59.672 61.111 0.00 0.00 0.00 3.77
6230 7200 1.297598 GTGCGTGTGTGTGCTCAAC 60.298 57.895 0.00 0.00 0.00 3.18
6231 7201 1.743252 TGTGCGTGTGTGTGCTCAA 60.743 52.632 0.00 0.00 32.31 3.02
6232 7202 2.125350 TGTGCGTGTGTGTGCTCA 60.125 55.556 0.00 0.00 32.75 4.26
6233 7203 2.324477 GTGTGCGTGTGTGTGCTC 59.676 61.111 0.00 0.00 0.00 4.26
6234 7204 3.202001 GGTGTGCGTGTGTGTGCT 61.202 61.111 0.00 0.00 0.00 4.40
6235 7205 4.250431 GGGTGTGCGTGTGTGTGC 62.250 66.667 0.00 0.00 0.00 4.57
6236 7206 3.935872 CGGGTGTGCGTGTGTGTG 61.936 66.667 0.00 0.00 0.00 3.82
6237 7207 4.150203 TCGGGTGTGCGTGTGTGT 62.150 61.111 0.00 0.00 0.00 3.72
6238 7208 3.337889 CTCGGGTGTGCGTGTGTG 61.338 66.667 0.00 0.00 0.00 3.82
6239 7209 2.018727 TAACTCGGGTGTGCGTGTGT 62.019 55.000 0.00 0.00 0.00 3.72
6240 7210 0.669318 ATAACTCGGGTGTGCGTGTG 60.669 55.000 0.00 0.00 0.00 3.82
6241 7211 0.889994 TATAACTCGGGTGTGCGTGT 59.110 50.000 0.00 0.00 0.00 4.49
6242 7212 1.924524 CTTATAACTCGGGTGTGCGTG 59.075 52.381 0.00 0.00 0.00 5.34
6243 7213 1.134907 CCTTATAACTCGGGTGTGCGT 60.135 52.381 0.00 0.00 0.00 5.24
6244 7214 1.567504 CCTTATAACTCGGGTGTGCG 58.432 55.000 0.00 0.00 0.00 5.34
6245 7215 1.296727 GCCTTATAACTCGGGTGTGC 58.703 55.000 0.00 0.00 0.00 4.57
6246 7216 1.208535 TGGCCTTATAACTCGGGTGTG 59.791 52.381 3.32 0.00 0.00 3.82
6247 7217 1.208776 GTGGCCTTATAACTCGGGTGT 59.791 52.381 3.32 0.00 0.00 4.16
6248 7218 1.208535 TGTGGCCTTATAACTCGGGTG 59.791 52.381 3.32 0.00 0.00 4.61
6249 7219 1.575419 TGTGGCCTTATAACTCGGGT 58.425 50.000 3.32 0.00 0.00 5.28
6250 7220 2.494059 CATGTGGCCTTATAACTCGGG 58.506 52.381 3.32 0.00 0.00 5.14
6251 7221 1.873591 GCATGTGGCCTTATAACTCGG 59.126 52.381 3.32 0.00 36.11 4.63
6252 7222 2.545526 CTGCATGTGGCCTTATAACTCG 59.454 50.000 3.32 0.00 43.89 4.18
6253 7223 2.291741 GCTGCATGTGGCCTTATAACTC 59.708 50.000 3.32 0.00 43.89 3.01
6254 7224 2.301346 GCTGCATGTGGCCTTATAACT 58.699 47.619 3.32 0.00 43.89 2.24
6255 7225 1.338020 GGCTGCATGTGGCCTTATAAC 59.662 52.381 19.11 0.00 44.48 1.89
6256 7226 1.691196 GGCTGCATGTGGCCTTATAA 58.309 50.000 19.11 0.00 44.48 0.98
6257 7227 0.178992 GGGCTGCATGTGGCCTTATA 60.179 55.000 23.23 0.00 46.80 0.98
6258 7228 1.456331 GGGCTGCATGTGGCCTTAT 60.456 57.895 23.23 0.00 46.80 1.73
6259 7229 2.044053 GGGCTGCATGTGGCCTTA 60.044 61.111 23.23 0.00 46.80 2.69
6263 7233 3.304721 TGTTGGGCTGCATGTGGC 61.305 61.111 0.50 0.00 45.13 5.01
6264 7234 1.537814 ATGTGTTGGGCTGCATGTGG 61.538 55.000 0.50 0.00 0.00 4.17
6265 7235 0.108992 GATGTGTTGGGCTGCATGTG 60.109 55.000 0.50 0.00 0.00 3.21
6266 7236 1.252904 GGATGTGTTGGGCTGCATGT 61.253 55.000 0.50 0.00 0.00 3.21
6267 7237 1.252215 TGGATGTGTTGGGCTGCATG 61.252 55.000 0.50 0.00 0.00 4.06
6268 7238 1.077086 TGGATGTGTTGGGCTGCAT 59.923 52.632 0.50 0.00 0.00 3.96
6269 7239 1.902918 GTGGATGTGTTGGGCTGCA 60.903 57.895 0.50 0.00 0.00 4.41
6270 7240 2.964978 GTGGATGTGTTGGGCTGC 59.035 61.111 0.00 0.00 0.00 5.25
6271 7241 2.334946 CCGTGGATGTGTTGGGCTG 61.335 63.158 0.00 0.00 0.00 4.85
6272 7242 2.034066 CCGTGGATGTGTTGGGCT 59.966 61.111 0.00 0.00 0.00 5.19
6273 7243 3.747976 GCCGTGGATGTGTTGGGC 61.748 66.667 0.00 0.00 0.00 5.36
6274 7244 2.191786 TAGGCCGTGGATGTGTTGGG 62.192 60.000 0.00 0.00 0.00 4.12
6275 7245 1.024579 GTAGGCCGTGGATGTGTTGG 61.025 60.000 0.00 0.00 0.00 3.77
6276 7246 1.358725 CGTAGGCCGTGGATGTGTTG 61.359 60.000 0.00 0.00 0.00 3.33
6277 7247 1.079405 CGTAGGCCGTGGATGTGTT 60.079 57.895 0.00 0.00 0.00 3.32
6278 7248 2.577059 CGTAGGCCGTGGATGTGT 59.423 61.111 0.00 0.00 0.00 3.72
6279 7249 2.202878 CCGTAGGCCGTGGATGTG 60.203 66.667 5.10 0.00 46.14 3.21
6291 7261 3.036026 CAGTAGTGCAGTGCCGTAG 57.964 57.895 13.72 0.00 0.00 3.51
6301 7271 4.362206 CCAGGTGGACTAGCAGTAGTGC 62.362 59.091 15.00 15.00 45.49 4.40
6302 7272 1.478510 CCAGGTGGACTAGCAGTAGTG 59.521 57.143 0.00 0.00 39.78 2.74
6303 7273 1.358103 TCCAGGTGGACTAGCAGTAGT 59.642 52.381 0.00 0.00 42.59 2.73
6304 7274 2.145397 TCCAGGTGGACTAGCAGTAG 57.855 55.000 0.00 0.00 39.78 2.57
6314 7284 2.567169 CTGATACAAGTGTCCAGGTGGA 59.433 50.000 0.00 0.00 43.08 4.02
6315 7285 2.355108 CCTGATACAAGTGTCCAGGTGG 60.355 54.545 17.89 0.00 40.77 4.61
6316 7286 2.977914 CCTGATACAAGTGTCCAGGTG 58.022 52.381 17.89 2.29 40.77 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.