Multiple sequence alignment - TraesCS7D01G077800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G077800 chr7D 100.000 2576 0 0 1 2576 45758762 45761337 0.000000e+00 4758
1 TraesCS7D01G077800 chr7D 95.902 244 8 2 2333 2576 352885125 352884884 6.680000e-106 394
2 TraesCS7D01G077800 chr7D 94.650 243 11 2 2333 2574 337553537 337553296 2.420000e-100 375
3 TraesCS7D01G077800 chr7D 87.209 172 22 0 2154 2325 633183398 633183569 2.020000e-46 196
4 TraesCS7D01G077800 chr7A 83.634 1387 146 26 3 1350 48011085 48012429 0.000000e+00 1229
5 TraesCS7D01G077800 chr7A 82.337 753 87 23 1263 2013 489704585 489703877 1.690000e-171 612
6 TraesCS7D01G077800 chr7A 85.496 393 36 14 1706 2086 48012585 48012968 8.640000e-105 390
7 TraesCS7D01G077800 chr7A 86.425 221 27 2 2330 2550 732509246 732509463 3.310000e-59 239
8 TraesCS7D01G077800 chr7A 89.506 162 17 0 2154 2315 608434496 608434657 3.360000e-49 206
9 TraesCS7D01G077800 chr7A 89.506 162 16 1 2154 2315 608427999 608428159 1.210000e-48 204
10 TraesCS7D01G077800 chr2D 87.435 764 87 6 3 758 27961232 27961994 0.000000e+00 870
11 TraesCS7D01G077800 chr2D 85.227 176 25 1 2151 2325 450568691 450568866 2.040000e-41 180
12 TraesCS7D01G077800 chr5D 86.745 762 95 3 3 758 519705379 519706140 0.000000e+00 843
13 TraesCS7D01G077800 chr5D 84.514 762 112 3 3 758 231808046 231808807 0.000000e+00 749
14 TraesCS7D01G077800 chr3B 86.082 776 99 5 1 767 474762984 474762209 0.000000e+00 826
15 TraesCS7D01G077800 chr3B 86.286 175 21 2 2153 2325 511624420 511624593 1.220000e-43 187
16 TraesCS7D01G077800 chr3D 86.275 765 98 6 1 758 590849412 590848648 0.000000e+00 824
17 TraesCS7D01G077800 chr3D 90.283 247 23 1 2330 2576 40256233 40256478 3.200000e-84 322
18 TraesCS7D01G077800 chr3D 92.000 175 10 3 2152 2324 376809551 376809379 2.560000e-60 243
19 TraesCS7D01G077800 chr4D 87.361 720 76 9 47 758 503589381 503590093 0.000000e+00 811
20 TraesCS7D01G077800 chr4D 80.128 312 53 6 1175 1486 54621952 54621650 9.280000e-55 224
21 TraesCS7D01G077800 chr4D 88.542 96 9 2 1702 1796 54621345 54621251 5.820000e-22 115
22 TraesCS7D01G077800 chr6B 85.059 763 102 10 3 758 210576619 210575862 0.000000e+00 767
23 TraesCS7D01G077800 chr4A 85.604 778 57 25 830 1589 658351581 658352321 0.000000e+00 765
24 TraesCS7D01G077800 chr4A 85.604 778 57 25 830 1589 658922766 658922026 0.000000e+00 765
25 TraesCS7D01G077800 chr4A 86.470 643 58 10 956 1589 658412582 658413204 0.000000e+00 678
26 TraesCS7D01G077800 chr4A 86.500 400 32 7 806 1196 658349917 658350303 1.100000e-113 420
27 TraesCS7D01G077800 chr4A 89.610 308 31 1 1263 1570 614475231 614475537 8.640000e-105 390
28 TraesCS7D01G077800 chr4A 87.097 310 29 6 1706 2013 614475640 614475940 8.830000e-90 340
29 TraesCS7D01G077800 chr4A 81.731 312 48 6 1175 1486 542499330 542499632 4.260000e-63 252
30 TraesCS7D01G077800 chr4A 78.237 363 46 23 1707 2051 658413266 658413613 4.350000e-48 202
31 TraesCS7D01G077800 chr4A 80.081 246 30 14 1706 1940 658352391 658352628 5.700000e-37 165
32 TraesCS7D01G077800 chr4A 80.081 246 30 14 1706 1940 658921956 658921719 5.700000e-37 165
33 TraesCS7D01G077800 chr4A 89.011 91 9 1 1707 1796 542499949 542500039 7.530000e-21 111
34 TraesCS7D01G077800 chr4A 83.594 128 12 3 978 1096 658346897 658347024 7.530000e-21 111
35 TraesCS7D01G077800 chr5B 84.706 765 110 4 1 758 328361832 328362596 0.000000e+00 758
36 TraesCS7D01G077800 chr1D 84.375 768 116 4 3 767 338649720 338648954 0.000000e+00 750
37 TraesCS7D01G077800 chr1D 86.932 176 23 0 2150 2325 403042078 403042253 5.620000e-47 198
38 TraesCS7D01G077800 chr6A 91.270 252 13 6 2333 2576 51436902 51436652 4.110000e-88 335
39 TraesCS7D01G077800 chr6A 85.465 172 25 0 2154 2325 573506080 573505909 2.040000e-41 180
40 TraesCS7D01G077800 chr4B 79.553 313 55 6 1174 1486 80673258 80672955 5.580000e-52 215
41 TraesCS7D01G077800 chr4B 87.500 96 10 2 1702 1796 80672637 80672543 2.710000e-20 110
42 TraesCS7D01G077800 chr3A 84.000 175 28 0 2152 2326 83240468 83240294 4.410000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G077800 chr7D 45758762 45761337 2575 False 4758.00 4758 100.00000 1 2576 1 chr7D.!!$F1 2575
1 TraesCS7D01G077800 chr7A 48011085 48012968 1883 False 809.50 1229 84.56500 3 2086 2 chr7A.!!$F4 2083
2 TraesCS7D01G077800 chr7A 489703877 489704585 708 True 612.00 612 82.33700 1263 2013 1 chr7A.!!$R1 750
3 TraesCS7D01G077800 chr2D 27961232 27961994 762 False 870.00 870 87.43500 3 758 1 chr2D.!!$F1 755
4 TraesCS7D01G077800 chr5D 519705379 519706140 761 False 843.00 843 86.74500 3 758 1 chr5D.!!$F2 755
5 TraesCS7D01G077800 chr5D 231808046 231808807 761 False 749.00 749 84.51400 3 758 1 chr5D.!!$F1 755
6 TraesCS7D01G077800 chr3B 474762209 474762984 775 True 826.00 826 86.08200 1 767 1 chr3B.!!$R1 766
7 TraesCS7D01G077800 chr3D 590848648 590849412 764 True 824.00 824 86.27500 1 758 1 chr3D.!!$R2 757
8 TraesCS7D01G077800 chr4D 503589381 503590093 712 False 811.00 811 87.36100 47 758 1 chr4D.!!$F1 711
9 TraesCS7D01G077800 chr6B 210575862 210576619 757 True 767.00 767 85.05900 3 758 1 chr6B.!!$R1 755
10 TraesCS7D01G077800 chr4A 658921719 658922766 1047 True 465.00 765 82.84250 830 1940 2 chr4A.!!$R1 1110
11 TraesCS7D01G077800 chr4A 658412582 658413613 1031 False 440.00 678 82.35350 956 2051 2 chr4A.!!$F4 1095
12 TraesCS7D01G077800 chr4A 658346897 658352628 5731 False 365.25 765 83.94475 806 1940 4 chr4A.!!$F3 1134
13 TraesCS7D01G077800 chr4A 614475231 614475940 709 False 365.00 390 88.35350 1263 2013 2 chr4A.!!$F2 750
14 TraesCS7D01G077800 chr5B 328361832 328362596 764 False 758.00 758 84.70600 1 758 1 chr5B.!!$F1 757
15 TraesCS7D01G077800 chr1D 338648954 338649720 766 True 750.00 750 84.37500 3 767 1 chr1D.!!$R1 764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
982 3231 1.374758 CCACACGGGAGAAGCAGAC 60.375 63.158 0.0 0.0 40.01 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2405 6401 0.107165 GAGAACAGGCGCCCCTATTT 60.107 55.0 26.15 9.21 40.33 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 36 4.901250 AGTTGTTCAAATTCTTGGGACCAT 59.099 37.500 0.00 0.00 33.01 3.55
36 38 6.553100 AGTTGTTCAAATTCTTGGGACCATAA 59.447 34.615 0.00 0.00 33.01 1.90
129 132 7.201478 CGAGTCTGACACCTAAGAAATGATTTC 60.201 40.741 9.82 9.82 39.96 2.17
153 156 2.999185 TTGGAAAGGGGAAGCAATCT 57.001 45.000 0.00 0.00 0.00 2.40
296 301 4.126437 CCGCACCATTACAAGATCATGTA 58.874 43.478 6.70 6.70 34.75 2.29
313 318 2.066592 TGTATTGTGGAAACCTCCCCA 58.933 47.619 0.00 0.00 41.64 4.96
327 332 5.584551 ACCTCCCCAAGTTGATTATATCC 57.415 43.478 3.87 0.00 0.00 2.59
354 359 3.541996 ATGTCGATGCCAGTTATGTGA 57.458 42.857 0.00 0.00 0.00 3.58
422 436 9.158233 CTGGTAAAGTTATTATTTCTTCGTGGA 57.842 33.333 0.00 0.00 0.00 4.02
439 453 2.485814 GTGGAACTTTCTGGATCAGTGC 59.514 50.000 0.00 0.00 32.61 4.40
506 521 8.361139 CCTTTATATCGACATTACTCTTCACCT 58.639 37.037 0.00 0.00 0.00 4.00
535 550 6.618287 TTATTCTGAAGACTGGTTGTGTTG 57.382 37.500 0.00 0.00 31.92 3.33
615 630 8.083828 TGAAGAAAGAAGCCTTGAGTATATCT 57.916 34.615 0.00 0.00 31.91 1.98
625 640 8.121833 AAGCCTTGAGTATATCTAGGATGATCT 58.878 37.037 9.16 0.00 46.87 2.75
736 753 7.872138 TGGGATTCTTCTTAATAGTGTTCCAT 58.128 34.615 0.00 0.00 0.00 3.41
758 775 1.976045 CTGCGTGGCGAATTTTGTAAC 59.024 47.619 0.00 0.00 0.00 2.50
763 780 3.054166 GTGGCGAATTTTGTAACCAACC 58.946 45.455 0.00 0.00 0.00 3.77
767 784 4.752604 GGCGAATTTTGTAACCAACCATTT 59.247 37.500 0.00 0.00 0.00 2.32
769 786 6.238511 GGCGAATTTTGTAACCAACCATTTTT 60.239 34.615 0.00 0.00 0.00 1.94
883 3108 4.572389 CACAATACAACATCCACCTAGAGC 59.428 45.833 0.00 0.00 0.00 4.09
926 3157 1.630369 TCCAGCATACATATGGCTCCC 59.370 52.381 7.80 0.00 34.32 4.30
927 3158 1.676916 CCAGCATACATATGGCTCCCG 60.677 57.143 7.80 0.00 34.32 5.14
982 3231 1.374758 CCACACGGGAGAAGCAGAC 60.375 63.158 0.00 0.00 40.01 3.51
1017 3266 1.064946 GATGTGGAGCTCCGACTCG 59.935 63.158 27.43 0.00 37.57 4.18
1077 4977 2.418910 ATCGTCCTCCACCTGCTCG 61.419 63.158 0.00 0.00 0.00 5.03
1082 4982 2.575993 CTCCACCTGCTCGTCCAG 59.424 66.667 0.00 0.00 0.00 3.86
1101 5013 4.657824 CCGTCGACACCACCGCTT 62.658 66.667 17.16 0.00 0.00 4.68
1102 5014 3.103911 CGTCGACACCACCGCTTC 61.104 66.667 17.16 0.00 0.00 3.86
1103 5015 2.737376 GTCGACACCACCGCTTCC 60.737 66.667 11.55 0.00 0.00 3.46
1104 5016 3.998672 TCGACACCACCGCTTCCC 61.999 66.667 0.00 0.00 0.00 3.97
1105 5017 4.003788 CGACACCACCGCTTCCCT 62.004 66.667 0.00 0.00 0.00 4.20
1106 5018 2.047179 GACACCACCGCTTCCCTC 60.047 66.667 0.00 0.00 0.00 4.30
1107 5019 3.607370 GACACCACCGCTTCCCTCC 62.607 68.421 0.00 0.00 0.00 4.30
1108 5020 4.410400 CACCACCGCTTCCCTCCC 62.410 72.222 0.00 0.00 0.00 4.30
1465 5389 3.197790 CCATGAGCCAGCGGTTCG 61.198 66.667 0.00 0.00 35.65 3.95
1526 5468 4.773117 GCCGACCTCCACGACGAC 62.773 72.222 0.00 0.00 0.00 4.34
1570 5512 1.692762 GGAAGATCTCCAGCCCAGGTA 60.693 57.143 0.00 0.00 44.67 3.08
1571 5513 1.414550 GAAGATCTCCAGCCCAGGTAC 59.585 57.143 0.00 0.00 0.00 3.34
1572 5514 0.757188 AGATCTCCAGCCCAGGTACG 60.757 60.000 0.00 0.00 0.00 3.67
1573 5515 1.001760 ATCTCCAGCCCAGGTACGT 59.998 57.895 0.00 0.00 0.00 3.57
1574 5516 0.260816 ATCTCCAGCCCAGGTACGTA 59.739 55.000 0.00 0.00 0.00 3.57
1575 5517 0.040058 TCTCCAGCCCAGGTACGTAA 59.960 55.000 0.00 0.00 0.00 3.18
1576 5518 1.120530 CTCCAGCCCAGGTACGTAAT 58.879 55.000 0.00 0.00 0.00 1.89
1577 5519 2.091720 TCTCCAGCCCAGGTACGTAATA 60.092 50.000 0.00 0.00 0.00 0.98
1600 5542 3.123050 GCAAAACAAATCAAACGCCTCT 58.877 40.909 0.00 0.00 0.00 3.69
1609 5551 5.358298 AATCAAACGCCTCTCACTTTTAC 57.642 39.130 0.00 0.00 0.00 2.01
1611 5553 2.521105 AACGCCTCTCACTTTTACGT 57.479 45.000 0.00 0.00 0.00 3.57
1613 5555 1.068127 ACGCCTCTCACTTTTACGTGT 59.932 47.619 0.00 0.00 36.33 4.49
1614 5556 1.455786 CGCCTCTCACTTTTACGTGTG 59.544 52.381 0.00 0.00 36.33 3.82
1616 5558 2.475487 GCCTCTCACTTTTACGTGTGTC 59.525 50.000 0.00 0.00 36.33 3.67
1617 5559 3.057734 CCTCTCACTTTTACGTGTGTCC 58.942 50.000 0.00 0.00 36.33 4.02
1618 5560 3.057734 CTCTCACTTTTACGTGTGTCCC 58.942 50.000 0.00 0.00 36.33 4.46
1619 5561 2.696707 TCTCACTTTTACGTGTGTCCCT 59.303 45.455 0.00 0.00 36.33 4.20
1621 5563 1.871039 CACTTTTACGTGTGTCCCTGG 59.129 52.381 0.00 0.00 0.00 4.45
1623 5565 2.140717 CTTTTACGTGTGTCCCTGGTC 58.859 52.381 0.00 0.00 0.00 4.02
1625 5567 0.470456 TTACGTGTGTCCCTGGTCCT 60.470 55.000 0.00 0.00 0.00 3.85
1626 5568 1.183030 TACGTGTGTCCCTGGTCCTG 61.183 60.000 0.00 0.00 0.00 3.86
1627 5569 2.032681 GTGTGTCCCTGGTCCTGC 59.967 66.667 0.00 0.00 0.00 4.85
1632 5574 4.020617 TCCCTGGTCCTGCGCTTG 62.021 66.667 9.73 0.76 0.00 4.01
1637 5579 2.347490 GGTCCTGCGCTTGGAGAA 59.653 61.111 19.98 0.23 33.78 2.87
1639 5581 1.578206 GGTCCTGCGCTTGGAGAAAC 61.578 60.000 19.98 10.73 33.78 2.78
1643 5585 0.110644 CTGCGCTTGGAGAAACGAAC 60.111 55.000 9.73 0.00 31.73 3.95
1659 5601 0.035739 GAACCCAAGGCCAACTCGTA 59.964 55.000 5.01 0.00 0.00 3.43
1662 5604 0.035439 CCCAAGGCCAACTCGTACAT 60.035 55.000 5.01 0.00 0.00 2.29
1664 5606 1.086696 CAAGGCCAACTCGTACATGG 58.913 55.000 5.01 0.00 37.29 3.66
1667 5609 1.559682 AGGCCAACTCGTACATGGATT 59.440 47.619 5.01 0.00 36.27 3.01
1674 5625 4.801330 ACTCGTACATGGATTGAGTTCA 57.199 40.909 9.39 0.00 36.56 3.18
1687 5638 5.812642 GGATTGAGTTCATCATCTTACGTGT 59.187 40.000 0.00 0.00 37.89 4.49
1688 5639 6.019479 GGATTGAGTTCATCATCTTACGTGTC 60.019 42.308 0.00 0.00 37.89 3.67
1691 5642 2.858344 GTTCATCATCTTACGTGTCGGG 59.142 50.000 0.00 0.00 0.00 5.14
1692 5643 2.371306 TCATCATCTTACGTGTCGGGA 58.629 47.619 0.00 0.00 0.00 5.14
1693 5644 2.756207 TCATCATCTTACGTGTCGGGAA 59.244 45.455 0.00 0.00 0.00 3.97
1696 5647 2.756207 TCATCTTACGTGTCGGGAATGA 59.244 45.455 0.00 0.00 0.00 2.57
1697 5648 3.193903 TCATCTTACGTGTCGGGAATGAA 59.806 43.478 0.00 0.00 0.00 2.57
1699 5650 4.196626 TCTTACGTGTCGGGAATGAATT 57.803 40.909 0.00 0.00 0.00 2.17
1700 5651 4.178540 TCTTACGTGTCGGGAATGAATTC 58.821 43.478 0.00 0.00 36.08 2.17
1701 5652 1.355971 ACGTGTCGGGAATGAATTCG 58.644 50.000 0.04 0.00 37.67 3.34
1702 5653 1.067425 ACGTGTCGGGAATGAATTCGA 60.067 47.619 0.04 0.00 37.67 3.71
1703 5654 2.201732 CGTGTCGGGAATGAATTCGAT 58.798 47.619 0.04 0.00 37.67 3.59
1704 5655 2.218759 CGTGTCGGGAATGAATTCGATC 59.781 50.000 0.04 1.47 37.67 3.69
1711 5662 2.286418 GGAATGAATTCGATCGTGGTGC 60.286 50.000 15.94 1.71 37.67 5.01
1804 5756 0.939577 TCTGCAGCTGAACGAACGAC 60.940 55.000 20.43 0.00 0.00 4.34
1825 5777 0.540365 ACCAAGACAACAGGCCATGG 60.540 55.000 7.63 7.63 0.00 3.66
1832 5784 1.980772 AACAGGCCATGGCAAGAGC 60.981 57.895 36.56 19.69 44.11 4.09
1852 5835 4.995124 AGCAAATCAGAAGCATTGATCAC 58.005 39.130 0.00 0.00 34.30 3.06
1900 5889 3.026707 TCGATAGGTGGATCCACTGAA 57.973 47.619 37.26 25.12 45.52 3.02
1904 5893 4.560311 CGATAGGTGGATCCACTGAAGATG 60.560 50.000 37.26 20.56 45.52 2.90
1958 5947 2.499693 TCGTTGTGGATGGATCTTGCTA 59.500 45.455 0.00 0.00 0.00 3.49
1962 5951 3.028130 TGTGGATGGATCTTGCTACGTA 58.972 45.455 0.00 0.00 0.00 3.57
1963 5952 3.181479 TGTGGATGGATCTTGCTACGTAC 60.181 47.826 0.00 0.00 0.00 3.67
1994 5986 4.154195 GCTGTACATCCGATTCAGTGTTTT 59.846 41.667 0.00 0.00 0.00 2.43
2029 6021 2.655474 GTCGTATTCGTGTCATATCGGC 59.345 50.000 0.00 0.00 38.33 5.54
2032 6024 1.502231 ATTCGTGTCATATCGGCTGC 58.498 50.000 0.00 0.00 0.00 5.25
2034 6026 2.302952 CGTGTCATATCGGCTGCGG 61.303 63.158 0.11 0.11 0.00 5.69
2052 6048 3.241701 GCGGATTGTATGGTGTTTGTTG 58.758 45.455 0.00 0.00 0.00 3.33
2089 6085 4.237349 GCTACAGCTTCTCATCTACTCC 57.763 50.000 0.00 0.00 38.21 3.85
2090 6086 3.005367 GCTACAGCTTCTCATCTACTCCC 59.995 52.174 0.00 0.00 38.21 4.30
2091 6087 2.393646 ACAGCTTCTCATCTACTCCCC 58.606 52.381 0.00 0.00 0.00 4.81
2092 6088 1.691434 CAGCTTCTCATCTACTCCCCC 59.309 57.143 0.00 0.00 0.00 5.40
2111 6107 5.494632 CCCCCATAATGTAAGACGTTTTC 57.505 43.478 0.00 0.00 0.00 2.29
2112 6108 5.190677 CCCCCATAATGTAAGACGTTTTCT 58.809 41.667 0.00 0.00 35.32 2.52
2113 6109 6.350906 CCCCCATAATGTAAGACGTTTTCTA 58.649 40.000 0.00 0.00 32.51 2.10
2114 6110 6.482308 CCCCCATAATGTAAGACGTTTTCTAG 59.518 42.308 0.00 0.00 32.51 2.43
2115 6111 7.046033 CCCCATAATGTAAGACGTTTTCTAGT 58.954 38.462 0.00 0.00 32.51 2.57
2116 6112 7.011109 CCCCATAATGTAAGACGTTTTCTAGTG 59.989 40.741 0.00 0.00 32.51 2.74
2117 6113 7.548075 CCCATAATGTAAGACGTTTTCTAGTGT 59.452 37.037 0.00 0.00 32.51 3.55
2118 6114 8.932791 CCATAATGTAAGACGTTTTCTAGTGTT 58.067 33.333 0.00 0.00 32.51 3.32
2147 6143 9.598517 AAAATGTCATGAGCAGTTTTAAAAAGA 57.401 25.926 13.96 0.00 31.34 2.52
2148 6144 8.807667 AATGTCATGAGCAGTTTTAAAAAGAG 57.192 30.769 1.31 0.00 0.00 2.85
2149 6145 7.566760 TGTCATGAGCAGTTTTAAAAAGAGA 57.433 32.000 1.31 0.00 0.00 3.10
2150 6146 7.642669 TGTCATGAGCAGTTTTAAAAAGAGAG 58.357 34.615 1.31 0.00 0.00 3.20
2151 6147 7.498900 TGTCATGAGCAGTTTTAAAAAGAGAGA 59.501 33.333 1.31 0.00 0.00 3.10
2152 6148 8.345565 GTCATGAGCAGTTTTAAAAAGAGAGAA 58.654 33.333 1.31 0.00 0.00 2.87
2153 6149 8.562892 TCATGAGCAGTTTTAAAAAGAGAGAAG 58.437 33.333 1.31 0.00 0.00 2.85
2154 6150 8.562892 CATGAGCAGTTTTAAAAAGAGAGAAGA 58.437 33.333 1.31 0.00 0.00 2.87
2155 6151 8.147642 TGAGCAGTTTTAAAAAGAGAGAAGAG 57.852 34.615 1.31 0.00 0.00 2.85
2156 6152 7.227512 TGAGCAGTTTTAAAAAGAGAGAAGAGG 59.772 37.037 1.31 0.00 0.00 3.69
2157 6153 7.057264 AGCAGTTTTAAAAAGAGAGAAGAGGT 58.943 34.615 1.31 0.00 0.00 3.85
2158 6154 8.211629 AGCAGTTTTAAAAAGAGAGAAGAGGTA 58.788 33.333 1.31 0.00 0.00 3.08
2159 6155 8.837389 GCAGTTTTAAAAAGAGAGAAGAGGTAA 58.163 33.333 1.31 0.00 0.00 2.85
2167 6163 6.642707 AAGAGAGAAGAGGTAATATCACCG 57.357 41.667 0.00 0.00 43.84 4.94
2168 6164 5.074115 AGAGAGAAGAGGTAATATCACCGG 58.926 45.833 0.00 0.00 43.84 5.28
2169 6165 5.063017 AGAGAAGAGGTAATATCACCGGA 57.937 43.478 9.46 0.00 43.84 5.14
2170 6166 5.455872 AGAGAAGAGGTAATATCACCGGAA 58.544 41.667 9.46 0.00 43.84 4.30
2171 6167 5.536916 AGAGAAGAGGTAATATCACCGGAAG 59.463 44.000 9.46 0.00 43.84 3.46
2172 6168 5.209659 AGAAGAGGTAATATCACCGGAAGT 58.790 41.667 9.46 0.00 43.84 3.01
2173 6169 5.302313 AGAAGAGGTAATATCACCGGAAGTC 59.698 44.000 9.46 0.00 43.84 3.01
2174 6170 4.543689 AGAGGTAATATCACCGGAAGTCA 58.456 43.478 9.46 0.00 43.84 3.41
2175 6171 5.148502 AGAGGTAATATCACCGGAAGTCAT 58.851 41.667 9.46 0.00 43.84 3.06
2176 6172 6.312529 AGAGGTAATATCACCGGAAGTCATA 58.687 40.000 9.46 0.00 43.84 2.15
2177 6173 6.208994 AGAGGTAATATCACCGGAAGTCATAC 59.791 42.308 9.46 4.54 43.84 2.39
2178 6174 5.836898 AGGTAATATCACCGGAAGTCATACA 59.163 40.000 9.46 0.00 43.84 2.29
2179 6175 6.325545 AGGTAATATCACCGGAAGTCATACAA 59.674 38.462 9.46 0.00 43.84 2.41
2180 6176 6.423001 GGTAATATCACCGGAAGTCATACAAC 59.577 42.308 9.46 0.00 0.00 3.32
2181 6177 5.871396 ATATCACCGGAAGTCATACAACT 57.129 39.130 9.46 0.00 0.00 3.16
2182 6178 4.553330 ATCACCGGAAGTCATACAACTT 57.447 40.909 9.46 0.00 42.10 2.66
2183 6179 3.659786 TCACCGGAAGTCATACAACTTG 58.340 45.455 9.46 0.00 39.55 3.16
2184 6180 2.159627 CACCGGAAGTCATACAACTTGC 59.840 50.000 9.46 0.00 42.30 4.01
2186 6182 2.527442 GGAAGTCATACAACTTGCGC 57.473 50.000 0.00 0.00 39.55 6.09
2187 6183 2.076863 GGAAGTCATACAACTTGCGCT 58.923 47.619 9.73 0.00 39.55 5.92
2188 6184 2.094417 GGAAGTCATACAACTTGCGCTC 59.906 50.000 9.73 0.00 39.55 5.03
2189 6185 1.350193 AGTCATACAACTTGCGCTCG 58.650 50.000 9.73 1.27 0.00 5.03
2190 6186 1.067846 AGTCATACAACTTGCGCTCGA 60.068 47.619 9.73 0.00 0.00 4.04
2191 6187 1.927174 GTCATACAACTTGCGCTCGAT 59.073 47.619 9.73 0.00 0.00 3.59
2192 6188 1.926510 TCATACAACTTGCGCTCGATG 59.073 47.619 9.73 7.09 0.00 3.84
2193 6189 1.660607 CATACAACTTGCGCTCGATGT 59.339 47.619 9.73 12.76 0.00 3.06
2194 6190 1.790755 TACAACTTGCGCTCGATGTT 58.209 45.000 9.73 0.00 0.00 2.71
2195 6191 0.512952 ACAACTTGCGCTCGATGTTC 59.487 50.000 9.73 0.00 0.00 3.18
2196 6192 0.512518 CAACTTGCGCTCGATGTTCA 59.487 50.000 9.73 0.00 0.00 3.18
2197 6193 0.792640 AACTTGCGCTCGATGTTCAG 59.207 50.000 9.73 0.00 0.00 3.02
2198 6194 0.319900 ACTTGCGCTCGATGTTCAGT 60.320 50.000 9.73 0.00 0.00 3.41
2199 6195 0.792640 CTTGCGCTCGATGTTCAGTT 59.207 50.000 9.73 0.00 0.00 3.16
2200 6196 1.195448 CTTGCGCTCGATGTTCAGTTT 59.805 47.619 9.73 0.00 0.00 2.66
2201 6197 0.512518 TGCGCTCGATGTTCAGTTTG 59.487 50.000 9.73 0.00 0.00 2.93
2202 6198 0.790207 GCGCTCGATGTTCAGTTTGA 59.210 50.000 0.00 0.00 0.00 2.69
2203 6199 1.394917 GCGCTCGATGTTCAGTTTGAT 59.605 47.619 0.00 0.00 0.00 2.57
2204 6200 2.603110 GCGCTCGATGTTCAGTTTGATA 59.397 45.455 0.00 0.00 0.00 2.15
2205 6201 3.542291 GCGCTCGATGTTCAGTTTGATAC 60.542 47.826 0.00 0.00 0.00 2.24
2206 6202 3.859961 CGCTCGATGTTCAGTTTGATACT 59.140 43.478 0.00 0.00 37.68 2.12
2207 6203 5.034797 CGCTCGATGTTCAGTTTGATACTA 58.965 41.667 0.00 0.00 34.56 1.82
2208 6204 5.172232 CGCTCGATGTTCAGTTTGATACTAG 59.828 44.000 0.00 0.00 34.56 2.57
2209 6205 6.266323 GCTCGATGTTCAGTTTGATACTAGA 58.734 40.000 0.00 0.00 34.56 2.43
2210 6206 6.752351 GCTCGATGTTCAGTTTGATACTAGAA 59.248 38.462 0.00 0.00 34.56 2.10
2211 6207 7.253817 GCTCGATGTTCAGTTTGATACTAGAAC 60.254 40.741 0.00 0.00 40.89 3.01
2212 6208 7.827701 TCGATGTTCAGTTTGATACTAGAACT 58.172 34.615 0.00 0.00 40.99 3.01
2213 6209 8.304596 TCGATGTTCAGTTTGATACTAGAACTT 58.695 33.333 0.00 10.38 40.99 2.66
2214 6210 8.926710 CGATGTTCAGTTTGATACTAGAACTTT 58.073 33.333 0.00 6.83 40.99 2.66
2233 6229 8.635328 AGAACTTTAAAAATACGGATTTGTGGT 58.365 29.630 6.32 0.00 35.38 4.16
2234 6230 8.806177 AACTTTAAAAATACGGATTTGTGGTC 57.194 30.769 6.32 0.00 35.38 4.02
2235 6231 7.942990 ACTTTAAAAATACGGATTTGTGGTCA 58.057 30.769 6.32 0.00 35.38 4.02
2236 6232 7.863877 ACTTTAAAAATACGGATTTGTGGTCAC 59.136 33.333 6.32 0.00 35.38 3.67
2237 6233 4.776795 AAAATACGGATTTGTGGTCACC 57.223 40.909 6.32 0.00 35.38 4.02
2238 6234 3.713826 AATACGGATTTGTGGTCACCT 57.286 42.857 0.00 0.00 0.00 4.00
2239 6235 4.829872 AATACGGATTTGTGGTCACCTA 57.170 40.909 0.00 0.00 0.00 3.08
2240 6236 4.829872 ATACGGATTTGTGGTCACCTAA 57.170 40.909 0.00 0.00 0.00 2.69
2241 6237 2.774687 ACGGATTTGTGGTCACCTAAC 58.225 47.619 0.00 0.00 0.00 2.34
2242 6238 2.370849 ACGGATTTGTGGTCACCTAACT 59.629 45.455 0.00 0.00 0.00 2.24
2243 6239 3.181448 ACGGATTTGTGGTCACCTAACTT 60.181 43.478 0.00 0.00 0.00 2.66
2244 6240 3.188460 CGGATTTGTGGTCACCTAACTTG 59.812 47.826 0.00 0.00 0.00 3.16
2245 6241 4.394729 GGATTTGTGGTCACCTAACTTGA 58.605 43.478 0.00 0.00 0.00 3.02
2246 6242 4.215613 GGATTTGTGGTCACCTAACTTGAC 59.784 45.833 0.00 0.00 42.35 3.18
2247 6243 3.916359 TTGTGGTCACCTAACTTGACA 57.084 42.857 0.00 0.00 44.47 3.58
2248 6244 4.431416 TTGTGGTCACCTAACTTGACAT 57.569 40.909 0.00 0.00 44.47 3.06
2249 6245 4.002906 TGTGGTCACCTAACTTGACATC 57.997 45.455 0.00 0.00 44.47 3.06
2250 6246 3.389656 TGTGGTCACCTAACTTGACATCA 59.610 43.478 0.00 1.03 44.47 3.07
2251 6247 3.746492 GTGGTCACCTAACTTGACATCAC 59.254 47.826 0.00 1.54 44.47 3.06
2252 6248 2.993899 GGTCACCTAACTTGACATCACG 59.006 50.000 4.96 0.00 44.47 4.35
2253 6249 3.554337 GGTCACCTAACTTGACATCACGT 60.554 47.826 4.96 0.00 44.47 4.49
2254 6250 3.428870 GTCACCTAACTTGACATCACGTG 59.571 47.826 9.94 9.94 42.58 4.49
2255 6251 2.157668 CACCTAACTTGACATCACGTGC 59.842 50.000 11.67 0.00 0.00 5.34
2256 6252 2.224185 ACCTAACTTGACATCACGTGCA 60.224 45.455 11.67 0.00 0.00 4.57
2257 6253 2.805671 CCTAACTTGACATCACGTGCAA 59.194 45.455 11.67 8.39 0.00 4.08
2258 6254 3.249799 CCTAACTTGACATCACGTGCAAA 59.750 43.478 11.67 0.00 0.00 3.68
2259 6255 3.988379 AACTTGACATCACGTGCAAAT 57.012 38.095 11.67 0.00 0.00 2.32
2260 6256 5.121611 CCTAACTTGACATCACGTGCAAATA 59.878 40.000 11.67 4.99 0.00 1.40
2261 6257 4.404507 ACTTGACATCACGTGCAAATAC 57.595 40.909 11.67 0.72 0.00 1.89
2262 6258 3.812609 ACTTGACATCACGTGCAAATACA 59.187 39.130 11.67 3.43 0.00 2.29
2263 6259 4.083855 ACTTGACATCACGTGCAAATACAG 60.084 41.667 11.67 3.89 0.00 2.74
2264 6260 3.398406 TGACATCACGTGCAAATACAGT 58.602 40.909 11.67 0.00 0.00 3.55
2265 6261 3.431912 TGACATCACGTGCAAATACAGTC 59.568 43.478 11.67 9.55 0.00 3.51
2266 6262 3.398406 ACATCACGTGCAAATACAGTCA 58.602 40.909 11.67 0.00 0.00 3.41
2267 6263 3.186409 ACATCACGTGCAAATACAGTCAC 59.814 43.478 11.67 0.00 0.00 3.67
2268 6264 2.827652 TCACGTGCAAATACAGTCACA 58.172 42.857 11.67 0.00 0.00 3.58
2269 6265 3.198872 TCACGTGCAAATACAGTCACAA 58.801 40.909 11.67 0.00 0.00 3.33
2270 6266 3.623510 TCACGTGCAAATACAGTCACAAA 59.376 39.130 11.67 0.00 0.00 2.83
2271 6267 4.095036 TCACGTGCAAATACAGTCACAAAA 59.905 37.500 11.67 0.00 0.00 2.44
2272 6268 4.204168 CACGTGCAAATACAGTCACAAAAC 59.796 41.667 0.82 0.00 0.00 2.43
2273 6269 4.142578 ACGTGCAAATACAGTCACAAAACA 60.143 37.500 0.00 0.00 0.00 2.83
2274 6270 4.204168 CGTGCAAATACAGTCACAAAACAC 59.796 41.667 0.00 0.00 0.00 3.32
2275 6271 4.204168 GTGCAAATACAGTCACAAAACACG 59.796 41.667 0.00 0.00 0.00 4.49
2276 6272 4.142578 TGCAAATACAGTCACAAAACACGT 60.143 37.500 0.00 0.00 0.00 4.49
2277 6273 4.204168 GCAAATACAGTCACAAAACACGTG 59.796 41.667 15.48 15.48 35.63 4.49
2278 6274 5.328691 CAAATACAGTCACAAAACACGTGT 58.671 37.500 17.22 17.22 35.79 4.49
2279 6275 6.479436 CAAATACAGTCACAAAACACGTGTA 58.521 36.000 23.69 1.22 35.79 2.90
2280 6276 6.854496 AATACAGTCACAAAACACGTGTAT 57.146 33.333 23.69 11.54 35.79 2.29
2281 6277 4.530094 ACAGTCACAAAACACGTGTATG 57.470 40.909 23.69 24.34 35.79 2.39
2282 6278 3.311322 ACAGTCACAAAACACGTGTATGG 59.689 43.478 27.83 20.02 35.79 2.74
2283 6279 3.558006 CAGTCACAAAACACGTGTATGGA 59.442 43.478 27.83 21.20 35.79 3.41
2284 6280 3.558418 AGTCACAAAACACGTGTATGGAC 59.442 43.478 27.83 27.16 35.79 4.02
2285 6281 2.540516 TCACAAAACACGTGTATGGACG 59.459 45.455 27.83 19.26 45.09 4.79
2294 6290 3.364889 CGTGTATGGACGTATCATGGT 57.635 47.619 12.46 0.00 34.56 3.55
2295 6291 3.049912 CGTGTATGGACGTATCATGGTG 58.950 50.000 12.46 0.00 34.56 4.17
2296 6292 3.490249 CGTGTATGGACGTATCATGGTGT 60.490 47.826 12.46 0.00 34.56 4.16
2297 6293 3.802139 GTGTATGGACGTATCATGGTGTG 59.198 47.826 12.46 0.00 0.00 3.82
2298 6294 3.449377 TGTATGGACGTATCATGGTGTGT 59.551 43.478 12.46 0.00 0.00 3.72
2299 6295 2.378445 TGGACGTATCATGGTGTGTG 57.622 50.000 0.00 0.00 0.00 3.82
2300 6296 1.066502 TGGACGTATCATGGTGTGTGG 60.067 52.381 0.00 0.00 0.00 4.17
2301 6297 1.006832 GACGTATCATGGTGTGTGGC 58.993 55.000 0.00 0.00 0.00 5.01
2302 6298 0.392461 ACGTATCATGGTGTGTGGCC 60.392 55.000 0.00 0.00 0.00 5.36
2303 6299 1.095228 CGTATCATGGTGTGTGGCCC 61.095 60.000 0.00 0.00 0.00 5.80
2304 6300 0.751643 GTATCATGGTGTGTGGCCCC 60.752 60.000 0.00 0.00 0.00 5.80
2305 6301 1.210885 TATCATGGTGTGTGGCCCCA 61.211 55.000 0.00 0.00 0.00 4.96
2306 6302 2.786512 ATCATGGTGTGTGGCCCCAC 62.787 60.000 11.95 11.95 46.33 4.61
2309 6305 4.974721 GGTGTGTGGCCCCACCTG 62.975 72.222 22.59 0.00 46.17 4.00
2310 6306 4.204028 GTGTGTGGCCCCACCTGT 62.204 66.667 16.28 0.00 45.63 4.00
2311 6307 4.202574 TGTGTGGCCCCACCTGTG 62.203 66.667 16.28 0.00 45.63 3.66
2312 6308 3.884774 GTGTGGCCCCACCTGTGA 61.885 66.667 7.18 0.00 45.63 3.58
2313 6309 3.569210 TGTGGCCCCACCTGTGAG 61.569 66.667 14.47 0.00 45.63 3.51
2314 6310 3.570212 GTGGCCCCACCTGTGAGT 61.570 66.667 0.00 0.00 40.79 3.41
2315 6311 3.249189 TGGCCCCACCTGTGAGTC 61.249 66.667 0.00 0.00 40.22 3.36
2316 6312 3.249189 GGCCCCACCTGTGAGTCA 61.249 66.667 0.00 0.00 34.51 3.41
2317 6313 2.348998 GCCCCACCTGTGAGTCAG 59.651 66.667 0.00 0.00 43.27 3.51
2318 6314 2.217038 GCCCCACCTGTGAGTCAGA 61.217 63.158 0.00 0.00 46.27 3.27
2319 6315 1.978473 CCCCACCTGTGAGTCAGAG 59.022 63.158 10.32 10.32 46.27 3.35
2320 6316 0.542938 CCCCACCTGTGAGTCAGAGA 60.543 60.000 18.49 0.00 46.27 3.10
2321 6317 1.566211 CCCACCTGTGAGTCAGAGAT 58.434 55.000 18.49 0.00 46.27 2.75
2322 6318 1.206610 CCCACCTGTGAGTCAGAGATG 59.793 57.143 18.49 11.79 46.27 2.90
2323 6319 1.206610 CCACCTGTGAGTCAGAGATGG 59.793 57.143 16.05 16.05 46.27 3.51
2324 6320 0.901124 ACCTGTGAGTCAGAGATGGC 59.099 55.000 18.49 0.00 46.27 4.40
2325 6321 0.900421 CCTGTGAGTCAGAGATGGCA 59.100 55.000 18.49 0.00 46.27 4.92
2326 6322 1.134759 CCTGTGAGTCAGAGATGGCAG 60.135 57.143 18.49 8.11 46.27 4.85
2327 6323 0.900421 TGTGAGTCAGAGATGGCAGG 59.100 55.000 0.00 0.00 0.00 4.85
2328 6324 0.901124 GTGAGTCAGAGATGGCAGGT 59.099 55.000 0.00 0.00 0.00 4.00
2329 6325 2.103373 GTGAGTCAGAGATGGCAGGTA 58.897 52.381 0.00 0.00 0.00 3.08
2330 6326 2.103373 TGAGTCAGAGATGGCAGGTAC 58.897 52.381 0.00 0.00 0.00 3.34
2331 6327 1.066303 GAGTCAGAGATGGCAGGTACG 59.934 57.143 0.00 0.00 0.00 3.67
2332 6328 1.103803 GTCAGAGATGGCAGGTACGA 58.896 55.000 0.00 0.00 0.00 3.43
2333 6329 1.476891 GTCAGAGATGGCAGGTACGAA 59.523 52.381 0.00 0.00 0.00 3.85
2334 6330 2.094182 GTCAGAGATGGCAGGTACGAAA 60.094 50.000 0.00 0.00 0.00 3.46
2335 6331 2.094182 TCAGAGATGGCAGGTACGAAAC 60.094 50.000 0.00 0.00 0.00 2.78
2336 6332 2.093973 CAGAGATGGCAGGTACGAAACT 60.094 50.000 0.00 0.00 0.00 2.66
2337 6333 2.166664 AGAGATGGCAGGTACGAAACTC 59.833 50.000 0.00 0.00 0.00 3.01
2338 6334 1.207329 AGATGGCAGGTACGAAACTCC 59.793 52.381 0.00 0.00 0.00 3.85
2339 6335 0.252197 ATGGCAGGTACGAAACTCCC 59.748 55.000 0.00 0.00 0.00 4.30
2340 6336 0.834687 TGGCAGGTACGAAACTCCCT 60.835 55.000 0.00 0.00 0.00 4.20
2341 6337 0.108281 GGCAGGTACGAAACTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
2342 6338 0.458025 GCAGGTACGAAACTCCCTCG 60.458 60.000 0.00 0.00 42.06 4.63
2343 6339 0.458025 CAGGTACGAAACTCCCTCGC 60.458 60.000 0.00 0.00 39.97 5.03
2344 6340 0.611340 AGGTACGAAACTCCCTCGCT 60.611 55.000 0.00 0.00 39.97 4.93
2345 6341 0.245813 GGTACGAAACTCCCTCGCTT 59.754 55.000 0.00 0.00 39.97 4.68
2346 6342 1.337541 GGTACGAAACTCCCTCGCTTT 60.338 52.381 0.00 0.00 39.97 3.51
2347 6343 2.410939 GTACGAAACTCCCTCGCTTTT 58.589 47.619 0.00 0.00 39.97 2.27
2348 6344 1.963172 ACGAAACTCCCTCGCTTTTT 58.037 45.000 0.00 0.00 39.97 1.94
2371 6367 8.900983 TTTTTATTTGCAGAAAAGCTAACCAT 57.099 26.923 0.00 0.00 32.45 3.55
2372 6368 8.900983 TTTTATTTGCAGAAAAGCTAACCATT 57.099 26.923 0.00 0.00 32.45 3.16
2373 6369 7.887996 TTATTTGCAGAAAAGCTAACCATTG 57.112 32.000 0.00 0.00 32.45 2.82
2374 6370 4.935352 TTGCAGAAAAGCTAACCATTGT 57.065 36.364 0.00 0.00 34.99 2.71
2375 6371 6.398234 TTTGCAGAAAAGCTAACCATTGTA 57.602 33.333 0.00 0.00 34.99 2.41
2376 6372 5.371115 TGCAGAAAAGCTAACCATTGTAC 57.629 39.130 0.00 0.00 34.99 2.90
2377 6373 5.070001 TGCAGAAAAGCTAACCATTGTACT 58.930 37.500 0.00 0.00 34.99 2.73
2378 6374 5.048782 TGCAGAAAAGCTAACCATTGTACTG 60.049 40.000 0.00 0.00 34.99 2.74
2379 6375 5.619981 GCAGAAAAGCTAACCATTGTACTGG 60.620 44.000 0.00 0.00 42.35 4.00
2380 6376 5.705441 CAGAAAAGCTAACCATTGTACTGGA 59.295 40.000 8.09 0.00 39.73 3.86
2381 6377 6.375455 CAGAAAAGCTAACCATTGTACTGGAT 59.625 38.462 8.09 0.00 39.73 3.41
2382 6378 7.552687 CAGAAAAGCTAACCATTGTACTGGATA 59.447 37.037 8.09 0.25 39.73 2.59
2383 6379 8.107095 AGAAAAGCTAACCATTGTACTGGATAA 58.893 33.333 8.09 0.00 39.73 1.75
2384 6380 8.823220 AAAAGCTAACCATTGTACTGGATAAT 57.177 30.769 8.09 0.00 39.73 1.28
2385 6381 7.807977 AAGCTAACCATTGTACTGGATAATG 57.192 36.000 8.09 2.59 39.73 1.90
2391 6387 5.849510 CCATTGTACTGGATAATGGTACGA 58.150 41.667 17.66 0.00 46.61 3.43
2392 6388 6.285224 CCATTGTACTGGATAATGGTACGAA 58.715 40.000 17.66 0.00 46.61 3.85
2393 6389 6.764085 CCATTGTACTGGATAATGGTACGAAA 59.236 38.462 17.66 0.00 46.61 3.46
2394 6390 7.281324 CCATTGTACTGGATAATGGTACGAAAA 59.719 37.037 17.66 0.00 46.61 2.29
2395 6391 8.836413 CATTGTACTGGATAATGGTACGAAAAT 58.164 33.333 1.66 0.00 38.74 1.82
2396 6392 8.795842 TTGTACTGGATAATGGTACGAAAATT 57.204 30.769 0.00 0.00 38.74 1.82
2397 6393 9.887629 TTGTACTGGATAATGGTACGAAAATTA 57.112 29.630 0.00 0.00 38.74 1.40
2398 6394 9.887629 TGTACTGGATAATGGTACGAAAATTAA 57.112 29.630 0.00 0.00 38.74 1.40
2421 6417 3.374318 AAAAATAGGGGCGCCTGTT 57.626 47.368 31.29 27.33 0.00 3.16
2422 6418 1.182667 AAAAATAGGGGCGCCTGTTC 58.817 50.000 31.29 9.46 0.00 3.18
2423 6419 0.331616 AAAATAGGGGCGCCTGTTCT 59.668 50.000 31.29 16.02 0.00 3.01
2424 6420 0.107165 AAATAGGGGCGCCTGTTCTC 60.107 55.000 31.29 8.16 0.00 2.87
2425 6421 2.311688 AATAGGGGCGCCTGTTCTCG 62.312 60.000 31.29 0.00 0.00 4.04
2426 6422 3.949885 TAGGGGCGCCTGTTCTCGA 62.950 63.158 31.29 7.38 0.00 4.04
2427 6423 4.388499 GGGGCGCCTGTTCTCGAA 62.388 66.667 28.56 0.00 0.00 3.71
2428 6424 3.119096 GGGCGCCTGTTCTCGAAC 61.119 66.667 28.56 0.41 41.50 3.95
2429 6425 3.119096 GGCGCCTGTTCTCGAACC 61.119 66.667 22.15 0.00 40.46 3.62
2430 6426 3.119096 GCGCCTGTTCTCGAACCC 61.119 66.667 0.00 0.00 40.46 4.11
2431 6427 2.434359 CGCCTGTTCTCGAACCCC 60.434 66.667 7.28 0.00 40.46 4.95
2432 6428 2.747686 GCCTGTTCTCGAACCCCA 59.252 61.111 7.28 0.00 40.46 4.96
2433 6429 1.072505 GCCTGTTCTCGAACCCCAA 59.927 57.895 7.28 0.00 40.46 4.12
2434 6430 1.235281 GCCTGTTCTCGAACCCCAAC 61.235 60.000 7.28 0.00 40.46 3.77
2435 6431 0.107831 CCTGTTCTCGAACCCCAACA 59.892 55.000 7.28 0.00 40.46 3.33
2436 6432 1.476110 CCTGTTCTCGAACCCCAACAA 60.476 52.381 7.28 0.00 40.46 2.83
2437 6433 2.294074 CTGTTCTCGAACCCCAACAAA 58.706 47.619 7.28 0.00 40.46 2.83
2438 6434 2.018515 TGTTCTCGAACCCCAACAAAC 58.981 47.619 7.28 0.00 40.46 2.93
2439 6435 1.003223 GTTCTCGAACCCCAACAAACG 60.003 52.381 0.00 0.00 35.36 3.60
2440 6436 0.464870 TCTCGAACCCCAACAAACGA 59.535 50.000 0.00 0.00 0.00 3.85
2441 6437 1.071071 TCTCGAACCCCAACAAACGAT 59.929 47.619 0.00 0.00 0.00 3.73
2442 6438 1.463444 CTCGAACCCCAACAAACGATC 59.537 52.381 0.00 0.00 0.00 3.69
2443 6439 1.202663 TCGAACCCCAACAAACGATCA 60.203 47.619 0.00 0.00 0.00 2.92
2444 6440 1.069500 CGAACCCCAACAAACGATCAC 60.069 52.381 0.00 0.00 0.00 3.06
2445 6441 1.950909 GAACCCCAACAAACGATCACA 59.049 47.619 0.00 0.00 0.00 3.58
2446 6442 2.060050 ACCCCAACAAACGATCACAA 57.940 45.000 0.00 0.00 0.00 3.33
2447 6443 1.679153 ACCCCAACAAACGATCACAAC 59.321 47.619 0.00 0.00 0.00 3.32
2448 6444 1.678627 CCCCAACAAACGATCACAACA 59.321 47.619 0.00 0.00 0.00 3.33
2449 6445 2.542824 CCCCAACAAACGATCACAACAC 60.543 50.000 0.00 0.00 0.00 3.32
2450 6446 2.098280 CCCAACAAACGATCACAACACA 59.902 45.455 0.00 0.00 0.00 3.72
2451 6447 3.428180 CCCAACAAACGATCACAACACAA 60.428 43.478 0.00 0.00 0.00 3.33
2452 6448 3.790820 CCAACAAACGATCACAACACAAG 59.209 43.478 0.00 0.00 0.00 3.16
2453 6449 3.065019 ACAAACGATCACAACACAAGC 57.935 42.857 0.00 0.00 0.00 4.01
2454 6450 2.223479 ACAAACGATCACAACACAAGCC 60.223 45.455 0.00 0.00 0.00 4.35
2455 6451 1.674359 AACGATCACAACACAAGCCA 58.326 45.000 0.00 0.00 0.00 4.75
2456 6452 1.229428 ACGATCACAACACAAGCCAG 58.771 50.000 0.00 0.00 0.00 4.85
2457 6453 1.229428 CGATCACAACACAAGCCAGT 58.771 50.000 0.00 0.00 0.00 4.00
2458 6454 1.195448 CGATCACAACACAAGCCAGTC 59.805 52.381 0.00 0.00 0.00 3.51
2459 6455 2.498167 GATCACAACACAAGCCAGTCT 58.502 47.619 0.00 0.00 0.00 3.24
2460 6456 3.664107 GATCACAACACAAGCCAGTCTA 58.336 45.455 0.00 0.00 0.00 2.59
2461 6457 3.552132 TCACAACACAAGCCAGTCTAA 57.448 42.857 0.00 0.00 0.00 2.10
2462 6458 3.202906 TCACAACACAAGCCAGTCTAAC 58.797 45.455 0.00 0.00 0.00 2.34
2463 6459 2.290641 CACAACACAAGCCAGTCTAACC 59.709 50.000 0.00 0.00 0.00 2.85
2464 6460 2.092646 ACAACACAAGCCAGTCTAACCA 60.093 45.455 0.00 0.00 0.00 3.67
2465 6461 2.948979 CAACACAAGCCAGTCTAACCAA 59.051 45.455 0.00 0.00 0.00 3.67
2466 6462 3.508845 ACACAAGCCAGTCTAACCAAT 57.491 42.857 0.00 0.00 0.00 3.16
2467 6463 3.412386 ACACAAGCCAGTCTAACCAATC 58.588 45.455 0.00 0.00 0.00 2.67
2468 6464 3.073062 ACACAAGCCAGTCTAACCAATCT 59.927 43.478 0.00 0.00 0.00 2.40
2469 6465 4.286032 ACACAAGCCAGTCTAACCAATCTA 59.714 41.667 0.00 0.00 0.00 1.98
2470 6466 5.221843 ACACAAGCCAGTCTAACCAATCTAA 60.222 40.000 0.00 0.00 0.00 2.10
2471 6467 5.122396 CACAAGCCAGTCTAACCAATCTAAC 59.878 44.000 0.00 0.00 0.00 2.34
2472 6468 4.489306 AGCCAGTCTAACCAATCTAACC 57.511 45.455 0.00 0.00 0.00 2.85
2473 6469 4.104831 AGCCAGTCTAACCAATCTAACCT 58.895 43.478 0.00 0.00 0.00 3.50
2474 6470 4.536489 AGCCAGTCTAACCAATCTAACCTT 59.464 41.667 0.00 0.00 0.00 3.50
2475 6471 4.876679 GCCAGTCTAACCAATCTAACCTTC 59.123 45.833 0.00 0.00 0.00 3.46
2476 6472 5.570844 GCCAGTCTAACCAATCTAACCTTCA 60.571 44.000 0.00 0.00 0.00 3.02
2477 6473 5.875359 CCAGTCTAACCAATCTAACCTTCAC 59.125 44.000 0.00 0.00 0.00 3.18
2478 6474 5.577164 CAGTCTAACCAATCTAACCTTCACG 59.423 44.000 0.00 0.00 0.00 4.35
2479 6475 5.245526 AGTCTAACCAATCTAACCTTCACGT 59.754 40.000 0.00 0.00 0.00 4.49
2480 6476 5.930569 GTCTAACCAATCTAACCTTCACGTT 59.069 40.000 0.00 0.00 0.00 3.99
2481 6477 6.090493 GTCTAACCAATCTAACCTTCACGTTC 59.910 42.308 0.00 0.00 0.00 3.95
2482 6478 3.671716 ACCAATCTAACCTTCACGTTCC 58.328 45.455 0.00 0.00 0.00 3.62
2483 6479 3.007635 CCAATCTAACCTTCACGTTCCC 58.992 50.000 0.00 0.00 0.00 3.97
2484 6480 3.558321 CCAATCTAACCTTCACGTTCCCA 60.558 47.826 0.00 0.00 0.00 4.37
2485 6481 2.825861 TCTAACCTTCACGTTCCCAC 57.174 50.000 0.00 0.00 0.00 4.61
2486 6482 1.345415 TCTAACCTTCACGTTCCCACC 59.655 52.381 0.00 0.00 0.00 4.61
2487 6483 1.346722 CTAACCTTCACGTTCCCACCT 59.653 52.381 0.00 0.00 0.00 4.00
2488 6484 0.108019 AACCTTCACGTTCCCACCTC 59.892 55.000 0.00 0.00 0.00 3.85
2489 6485 1.052124 ACCTTCACGTTCCCACCTCA 61.052 55.000 0.00 0.00 0.00 3.86
2490 6486 0.324943 CCTTCACGTTCCCACCTCAT 59.675 55.000 0.00 0.00 0.00 2.90
2491 6487 1.442769 CTTCACGTTCCCACCTCATG 58.557 55.000 0.00 0.00 0.00 3.07
2492 6488 0.762418 TTCACGTTCCCACCTCATGT 59.238 50.000 0.00 0.00 0.00 3.21
2493 6489 1.634960 TCACGTTCCCACCTCATGTA 58.365 50.000 0.00 0.00 0.00 2.29
2494 6490 2.184533 TCACGTTCCCACCTCATGTAT 58.815 47.619 0.00 0.00 0.00 2.29
2495 6491 2.093711 TCACGTTCCCACCTCATGTATG 60.094 50.000 0.00 0.00 0.00 2.39
2496 6492 1.209504 ACGTTCCCACCTCATGTATGG 59.790 52.381 0.00 0.00 0.00 2.74
2497 6493 1.484653 CGTTCCCACCTCATGTATGGA 59.515 52.381 12.41 2.23 35.33 3.41
2498 6494 2.104792 CGTTCCCACCTCATGTATGGAT 59.895 50.000 12.41 0.00 35.33 3.41
2499 6495 3.323691 CGTTCCCACCTCATGTATGGATA 59.676 47.826 12.41 0.88 35.33 2.59
2500 6496 4.642429 GTTCCCACCTCATGTATGGATAC 58.358 47.826 12.41 7.40 35.33 2.24
2501 6497 3.248024 TCCCACCTCATGTATGGATACC 58.752 50.000 12.41 0.00 35.33 2.73
2502 6498 2.978978 CCCACCTCATGTATGGATACCA 59.021 50.000 12.41 0.00 38.19 3.25
2503 6499 3.394274 CCCACCTCATGTATGGATACCAA 59.606 47.826 12.41 0.00 36.95 3.67
2504 6500 4.141274 CCCACCTCATGTATGGATACCAAA 60.141 45.833 12.41 0.00 36.95 3.28
2505 6501 4.821805 CCACCTCATGTATGGATACCAAAC 59.178 45.833 6.77 0.00 36.95 2.93
2506 6502 4.821805 CACCTCATGTATGGATACCAAACC 59.178 45.833 8.63 0.00 36.95 3.27
2507 6503 4.726825 ACCTCATGTATGGATACCAAACCT 59.273 41.667 8.63 0.00 36.95 3.50
2508 6504 5.908831 ACCTCATGTATGGATACCAAACCTA 59.091 40.000 8.63 0.00 36.95 3.08
2509 6505 6.183361 ACCTCATGTATGGATACCAAACCTAC 60.183 42.308 8.63 0.00 36.95 3.18
2510 6506 6.183361 CCTCATGTATGGATACCAAACCTACA 60.183 42.308 0.00 0.00 36.95 2.74
2511 6507 7.387265 TCATGTATGGATACCAAACCTACAT 57.613 36.000 8.19 8.19 36.95 2.29
2512 6508 7.223584 TCATGTATGGATACCAAACCTACATG 58.776 38.462 22.65 22.65 41.94 3.21
2513 6509 6.569127 TGTATGGATACCAAACCTACATGT 57.431 37.500 2.69 2.69 36.95 3.21
2514 6510 7.678207 TGTATGGATACCAAACCTACATGTA 57.322 36.000 5.25 5.25 36.95 2.29
2515 6511 8.270137 TGTATGGATACCAAACCTACATGTAT 57.730 34.615 5.91 0.00 36.95 2.29
2516 6512 8.719596 TGTATGGATACCAAACCTACATGTATT 58.280 33.333 5.91 0.00 36.95 1.89
2519 6515 8.555896 TGGATACCAAACCTACATGTATTAGA 57.444 34.615 5.91 0.00 0.00 2.10
2520 6516 8.426489 TGGATACCAAACCTACATGTATTAGAC 58.574 37.037 5.91 0.00 0.00 2.59
2521 6517 7.597743 GGATACCAAACCTACATGTATTAGACG 59.402 40.741 5.91 0.00 0.00 4.18
2522 6518 6.290294 ACCAAACCTACATGTATTAGACGT 57.710 37.500 5.91 0.00 0.00 4.34
2529 6525 3.735237 CATGTATTAGACGTGGGAGCT 57.265 47.619 0.00 0.00 40.83 4.09
2530 6526 4.060038 CATGTATTAGACGTGGGAGCTT 57.940 45.455 0.00 0.00 40.83 3.74
2531 6527 5.196341 CATGTATTAGACGTGGGAGCTTA 57.804 43.478 0.00 0.00 40.83 3.09
2532 6528 5.597806 CATGTATTAGACGTGGGAGCTTAA 58.402 41.667 0.00 0.00 40.83 1.85
2533 6529 5.664294 TGTATTAGACGTGGGAGCTTAAA 57.336 39.130 0.00 0.00 0.00 1.52
2534 6530 6.229936 TGTATTAGACGTGGGAGCTTAAAT 57.770 37.500 0.00 0.00 0.00 1.40
2535 6531 6.278363 TGTATTAGACGTGGGAGCTTAAATC 58.722 40.000 0.00 0.00 0.00 2.17
2536 6532 4.811969 TTAGACGTGGGAGCTTAAATCA 57.188 40.909 0.00 0.00 0.00 2.57
2537 6533 2.973945 AGACGTGGGAGCTTAAATCAC 58.026 47.619 0.00 0.00 0.00 3.06
2538 6534 2.301870 AGACGTGGGAGCTTAAATCACA 59.698 45.455 0.00 0.00 0.00 3.58
2539 6535 3.055094 AGACGTGGGAGCTTAAATCACAT 60.055 43.478 0.00 0.00 31.54 3.21
2540 6536 3.686016 ACGTGGGAGCTTAAATCACATT 58.314 40.909 0.00 0.00 31.54 2.71
2541 6537 4.079253 ACGTGGGAGCTTAAATCACATTT 58.921 39.130 0.00 0.00 31.54 2.32
2542 6538 5.250200 ACGTGGGAGCTTAAATCACATTTA 58.750 37.500 0.00 0.00 31.54 1.40
2543 6539 5.885912 ACGTGGGAGCTTAAATCACATTTAT 59.114 36.000 0.00 0.00 34.92 1.40
2544 6540 6.377146 ACGTGGGAGCTTAAATCACATTTATT 59.623 34.615 0.00 0.00 34.92 1.40
2545 6541 6.912591 CGTGGGAGCTTAAATCACATTTATTC 59.087 38.462 0.00 0.00 34.92 1.75
2546 6542 7.201732 CGTGGGAGCTTAAATCACATTTATTCT 60.202 37.037 0.00 0.00 34.92 2.40
2547 6543 8.470002 GTGGGAGCTTAAATCACATTTATTCTT 58.530 33.333 0.00 0.00 34.92 2.52
2548 6544 9.034800 TGGGAGCTTAAATCACATTTATTCTTT 57.965 29.630 0.00 0.00 34.92 2.52
2549 6545 9.521503 GGGAGCTTAAATCACATTTATTCTTTC 57.478 33.333 0.00 0.00 34.92 2.62
2573 6569 3.128375 AAAAAGTGTGGCCGCCAG 58.872 55.556 13.92 0.00 32.34 4.85
2574 6570 3.150647 AAAAAGTGTGGCCGCCAGC 62.151 57.895 13.92 9.13 42.60 4.85
2575 6571 4.586235 AAAGTGTGGCCGCCAGCT 62.586 61.111 13.92 11.49 43.05 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 36 7.448420 TGATCCAACAAAATCAAAAGCCATTA 58.552 30.769 0.00 0.00 0.00 1.90
36 38 5.867330 TGATCCAACAAAATCAAAAGCCAT 58.133 33.333 0.00 0.00 0.00 4.40
107 110 8.868522 AATGAAATCATTTCTTAGGTGTCAGA 57.131 30.769 11.46 0.00 43.48 3.27
129 132 3.767902 TGCTTCCCCTTTCCAAAAATG 57.232 42.857 0.00 0.00 0.00 2.32
153 156 8.855110 TCCAAAAAGATTACAGAAGCAACAATA 58.145 29.630 0.00 0.00 0.00 1.90
233 236 9.471084 CGTTCCATTTTCTTTTACCTTTGTTAT 57.529 29.630 0.00 0.00 0.00 1.89
258 263 0.928229 GCGGAAACTGGTATAGCACG 59.072 55.000 0.00 4.11 0.00 5.34
313 318 9.212641 CGACATTGATCTGGATATAATCAACTT 57.787 33.333 0.00 0.00 40.95 2.66
327 332 2.558378 ACTGGCATCGACATTGATCTG 58.442 47.619 0.00 0.00 0.00 2.90
354 359 2.487265 CCCTGGCGGCATTAATACTCTT 60.487 50.000 13.85 0.00 0.00 2.85
422 436 3.672808 CAGAGCACTGATCCAGAAAGTT 58.327 45.455 5.03 0.00 46.03 2.66
439 453 0.107993 TCAGCTTCATTCCCGCAGAG 60.108 55.000 0.00 0.00 0.00 3.35
506 521 5.762179 ACCAGTCTTCAGAATAATGGACA 57.238 39.130 18.94 0.00 0.00 4.02
736 753 1.169661 ACAAAATTCGCCACGCAGGA 61.170 50.000 0.00 0.00 41.22 3.86
794 823 5.570844 CGAGAGAGAAAAGGGGGATGTTTTA 60.571 44.000 0.00 0.00 0.00 1.52
795 824 4.667573 GAGAGAGAAAAGGGGGATGTTTT 58.332 43.478 0.00 0.00 0.00 2.43
799 828 2.111384 TCGAGAGAGAAAAGGGGGATG 58.889 52.381 0.00 0.00 34.84 3.51
849 3072 3.504134 TGTTGTATTGTGTTTCGGATGGG 59.496 43.478 0.00 0.00 0.00 4.00
883 3108 2.762875 GGTGGGGTCCGTCTAGGG 60.763 72.222 0.00 0.00 41.52 3.53
982 3231 4.834453 CTCGCTGCCCTGCTCTGG 62.834 72.222 0.00 0.00 0.00 3.86
1077 4977 4.736896 GGTGTCGACGGGCTGGAC 62.737 72.222 11.62 0.98 0.00 4.02
1234 5158 3.723348 GACGACCACCGGCTTTGC 61.723 66.667 0.00 0.00 44.62 3.68
1257 5181 1.376942 GTCCGTCTCCGTCTCCTCA 60.377 63.158 0.00 0.00 0.00 3.86
1374 5298 2.437359 CTGAAGCCGAAGCCCAGG 60.437 66.667 0.00 0.00 41.25 4.45
1480 5410 4.463879 CTCCTGCTCCTGCGGTGG 62.464 72.222 0.00 0.00 43.76 4.61
1515 5457 2.479650 GAGGTCGTCGTCGTGGAG 59.520 66.667 1.33 0.00 38.33 3.86
1516 5458 3.417224 CGAGGTCGTCGTCGTGGA 61.417 66.667 14.93 0.00 44.20 4.02
1570 5512 7.566148 GCGTTTGATTTGTTTTGCTTATTACGT 60.566 33.333 0.00 0.00 0.00 3.57
1571 5513 6.725780 GCGTTTGATTTGTTTTGCTTATTACG 59.274 34.615 0.00 0.00 0.00 3.18
1572 5514 7.007117 GGCGTTTGATTTGTTTTGCTTATTAC 58.993 34.615 0.00 0.00 0.00 1.89
1573 5515 6.926272 AGGCGTTTGATTTGTTTTGCTTATTA 59.074 30.769 0.00 0.00 0.00 0.98
1574 5516 5.757808 AGGCGTTTGATTTGTTTTGCTTATT 59.242 32.000 0.00 0.00 0.00 1.40
1575 5517 5.296748 AGGCGTTTGATTTGTTTTGCTTAT 58.703 33.333 0.00 0.00 0.00 1.73
1576 5518 4.688021 AGGCGTTTGATTTGTTTTGCTTA 58.312 34.783 0.00 0.00 0.00 3.09
1577 5519 3.530535 AGGCGTTTGATTTGTTTTGCTT 58.469 36.364 0.00 0.00 0.00 3.91
1600 5542 2.484065 CCAGGGACACACGTAAAAGTGA 60.484 50.000 10.39 0.00 44.43 3.41
1609 5551 2.343758 CAGGACCAGGGACACACG 59.656 66.667 0.00 0.00 0.00 4.49
1611 5553 3.625897 CGCAGGACCAGGGACACA 61.626 66.667 0.00 0.00 0.00 3.72
1614 5556 4.021925 AAGCGCAGGACCAGGGAC 62.022 66.667 11.47 0.00 0.00 4.46
1617 5559 3.965539 CTCCAAGCGCAGGACCAGG 62.966 68.421 16.52 4.77 0.00 4.45
1618 5560 2.435586 CTCCAAGCGCAGGACCAG 60.436 66.667 16.52 5.10 0.00 4.00
1619 5561 2.050836 TTTCTCCAAGCGCAGGACCA 62.051 55.000 16.52 4.88 0.00 4.02
1621 5563 1.869690 GTTTCTCCAAGCGCAGGAC 59.130 57.895 16.52 5.30 0.00 3.85
1623 5565 1.227999 TTCGTTTCTCCAAGCGCAGG 61.228 55.000 11.47 11.93 36.27 4.85
1625 5567 1.503818 GGTTCGTTTCTCCAAGCGCA 61.504 55.000 11.47 0.00 36.27 6.09
1626 5568 1.206831 GGTTCGTTTCTCCAAGCGC 59.793 57.895 0.00 0.00 36.27 5.92
1627 5569 0.882927 TGGGTTCGTTTCTCCAAGCG 60.883 55.000 0.00 0.00 37.56 4.68
1632 5574 1.241990 GGCCTTGGGTTCGTTTCTCC 61.242 60.000 0.00 0.00 0.00 3.71
1633 5575 0.536460 TGGCCTTGGGTTCGTTTCTC 60.536 55.000 3.32 0.00 0.00 2.87
1637 5579 0.822121 GAGTTGGCCTTGGGTTCGTT 60.822 55.000 3.32 0.00 0.00 3.85
1639 5581 2.325082 CGAGTTGGCCTTGGGTTCG 61.325 63.158 3.32 1.20 0.00 3.95
1643 5585 0.035439 ATGTACGAGTTGGCCTTGGG 60.035 55.000 3.32 0.00 0.00 4.12
1648 5590 1.670811 CAATCCATGTACGAGTTGGCC 59.329 52.381 0.00 0.00 0.00 5.36
1659 5601 6.481313 CGTAAGATGATGAACTCAATCCATGT 59.519 38.462 0.00 0.00 37.44 3.21
1662 5604 5.812127 CACGTAAGATGATGAACTCAATCCA 59.188 40.000 0.00 0.00 38.04 3.41
1664 5606 6.291322 CGACACGTAAGATGATGAACTCAATC 60.291 42.308 0.00 0.00 38.04 2.67
1667 5609 4.412207 CGACACGTAAGATGATGAACTCA 58.588 43.478 0.00 0.00 43.62 3.41
1674 5625 3.383505 TCATTCCCGACACGTAAGATGAT 59.616 43.478 0.00 0.00 43.62 2.45
1687 5638 2.469826 CACGATCGAATTCATTCCCGA 58.530 47.619 24.34 0.00 33.28 5.14
1688 5639 1.526887 CCACGATCGAATTCATTCCCG 59.473 52.381 24.34 4.04 33.28 5.14
1691 5642 2.609459 AGCACCACGATCGAATTCATTC 59.391 45.455 24.34 2.92 0.00 2.67
1692 5643 2.352651 CAGCACCACGATCGAATTCATT 59.647 45.455 24.34 0.00 0.00 2.57
1693 5644 1.935873 CAGCACCACGATCGAATTCAT 59.064 47.619 24.34 0.13 0.00 2.57
1696 5647 0.673333 TGCAGCACCACGATCGAATT 60.673 50.000 24.34 1.29 0.00 2.17
1697 5648 1.079197 TGCAGCACCACGATCGAAT 60.079 52.632 24.34 3.17 0.00 3.34
1699 5650 2.125952 CTGCAGCACCACGATCGA 60.126 61.111 24.34 0.00 0.00 3.59
1700 5651 3.190849 CCTGCAGCACCACGATCG 61.191 66.667 14.88 14.88 0.00 3.69
1701 5652 2.821366 CCCTGCAGCACCACGATC 60.821 66.667 8.66 0.00 0.00 3.69
1702 5653 4.415150 CCCCTGCAGCACCACGAT 62.415 66.667 8.66 0.00 0.00 3.73
1704 5655 2.930385 CTATCCCCTGCAGCACCACG 62.930 65.000 8.66 0.00 0.00 4.94
1726 5677 4.475135 GCGCCTTCACCTCCTCCC 62.475 72.222 0.00 0.00 0.00 4.30
1797 5749 0.580104 GTTGTCTTGGTGGTCGTTCG 59.420 55.000 0.00 0.00 0.00 3.95
1804 5756 0.540365 ATGGCCTGTTGTCTTGGTGG 60.540 55.000 3.32 0.00 0.00 4.61
1825 5777 3.505464 ATGCTTCTGATTTGCTCTTGC 57.495 42.857 0.00 0.00 40.20 4.01
1832 5784 4.441079 GGGGTGATCAATGCTTCTGATTTG 60.441 45.833 0.00 0.00 33.63 2.32
1852 5835 0.249155 GCGACAATGCATCAATGGGG 60.249 55.000 0.00 0.00 34.15 4.96
1900 5889 2.787473 TCGGAAACATGCTTCCATCT 57.213 45.000 24.05 0.00 44.52 2.90
1904 5893 2.083774 TGTCATCGGAAACATGCTTCC 58.916 47.619 16.56 16.56 41.40 3.46
1958 5947 1.303561 TACAGCTCCCCACGTACGT 60.304 57.895 16.72 16.72 0.00 3.57
1962 5951 1.614241 GGATGTACAGCTCCCCACGT 61.614 60.000 11.48 0.00 0.00 4.49
1963 5952 1.144057 GGATGTACAGCTCCCCACG 59.856 63.158 11.48 0.00 0.00 4.94
1994 5986 4.261867 CGAATACGACCCATCATCCAACTA 60.262 45.833 0.00 0.00 42.66 2.24
2029 6021 2.487762 ACAAACACCATACAATCCGCAG 59.512 45.455 0.00 0.00 0.00 5.18
2032 6024 3.057596 AGCAACAAACACCATACAATCCG 60.058 43.478 0.00 0.00 0.00 4.18
2034 6026 4.681025 CACAGCAACAAACACCATACAATC 59.319 41.667 0.00 0.00 0.00 2.67
2089 6085 5.190677 AGAAAACGTCTTACATTATGGGGG 58.809 41.667 0.00 0.00 29.66 5.40
2090 6086 7.011109 CACTAGAAAACGTCTTACATTATGGGG 59.989 40.741 0.00 0.00 37.84 4.96
2091 6087 7.548075 ACACTAGAAAACGTCTTACATTATGGG 59.452 37.037 0.00 0.00 37.84 4.00
2092 6088 8.475331 ACACTAGAAAACGTCTTACATTATGG 57.525 34.615 0.00 0.00 37.84 2.74
2121 6117 9.598517 TCTTTTTAAAACTGCTCATGACATTTT 57.401 25.926 0.00 0.03 0.00 1.82
2122 6118 9.252962 CTCTTTTTAAAACTGCTCATGACATTT 57.747 29.630 0.00 0.00 0.00 2.32
2123 6119 8.632679 TCTCTTTTTAAAACTGCTCATGACATT 58.367 29.630 0.00 0.00 0.00 2.71
2124 6120 8.169977 TCTCTTTTTAAAACTGCTCATGACAT 57.830 30.769 0.00 0.00 0.00 3.06
2125 6121 7.498900 TCTCTCTTTTTAAAACTGCTCATGACA 59.501 33.333 0.00 0.00 0.00 3.58
2126 6122 7.865707 TCTCTCTTTTTAAAACTGCTCATGAC 58.134 34.615 0.00 0.00 0.00 3.06
2127 6123 8.450578 TTCTCTCTTTTTAAAACTGCTCATGA 57.549 30.769 0.00 0.00 0.00 3.07
2128 6124 8.562892 TCTTCTCTCTTTTTAAAACTGCTCATG 58.437 33.333 0.00 0.00 0.00 3.07
2129 6125 8.682936 TCTTCTCTCTTTTTAAAACTGCTCAT 57.317 30.769 0.00 0.00 0.00 2.90
2130 6126 7.227512 CCTCTTCTCTCTTTTTAAAACTGCTCA 59.772 37.037 0.00 0.00 0.00 4.26
2131 6127 7.227711 ACCTCTTCTCTCTTTTTAAAACTGCTC 59.772 37.037 0.00 0.00 0.00 4.26
2132 6128 7.057264 ACCTCTTCTCTCTTTTTAAAACTGCT 58.943 34.615 0.00 0.00 0.00 4.24
2133 6129 7.265647 ACCTCTTCTCTCTTTTTAAAACTGC 57.734 36.000 0.00 0.00 0.00 4.40
2141 6137 7.982354 CGGTGATATTACCTCTTCTCTCTTTTT 59.018 37.037 14.25 0.00 38.62 1.94
2142 6138 7.418025 CCGGTGATATTACCTCTTCTCTCTTTT 60.418 40.741 14.25 0.00 38.62 2.27
2143 6139 6.041069 CCGGTGATATTACCTCTTCTCTCTTT 59.959 42.308 14.25 0.00 38.62 2.52
2144 6140 5.536916 CCGGTGATATTACCTCTTCTCTCTT 59.463 44.000 14.25 0.00 38.62 2.85
2145 6141 5.074115 CCGGTGATATTACCTCTTCTCTCT 58.926 45.833 14.25 0.00 38.62 3.10
2146 6142 5.071370 TCCGGTGATATTACCTCTTCTCTC 58.929 45.833 14.25 0.00 38.62 3.20
2147 6143 5.063017 TCCGGTGATATTACCTCTTCTCT 57.937 43.478 14.25 0.00 38.62 3.10
2148 6144 5.302313 ACTTCCGGTGATATTACCTCTTCTC 59.698 44.000 14.25 0.00 38.62 2.87
2149 6145 5.209659 ACTTCCGGTGATATTACCTCTTCT 58.790 41.667 14.25 0.00 38.62 2.85
2150 6146 5.068723 TGACTTCCGGTGATATTACCTCTTC 59.931 44.000 14.25 4.88 38.62 2.87
2151 6147 4.960469 TGACTTCCGGTGATATTACCTCTT 59.040 41.667 14.25 0.00 38.62 2.85
2152 6148 4.543689 TGACTTCCGGTGATATTACCTCT 58.456 43.478 14.25 0.00 38.62 3.69
2153 6149 4.931661 TGACTTCCGGTGATATTACCTC 57.068 45.455 14.25 5.67 38.62 3.85
2154 6150 5.836898 TGTATGACTTCCGGTGATATTACCT 59.163 40.000 14.25 0.00 38.62 3.08
2155 6151 6.092955 TGTATGACTTCCGGTGATATTACC 57.907 41.667 6.60 6.60 37.37 2.85
2156 6152 7.208080 AGTTGTATGACTTCCGGTGATATTAC 58.792 38.462 0.00 0.00 0.00 1.89
2157 6153 7.356089 AGTTGTATGACTTCCGGTGATATTA 57.644 36.000 0.00 0.00 0.00 0.98
2158 6154 6.235231 AGTTGTATGACTTCCGGTGATATT 57.765 37.500 0.00 0.00 0.00 1.28
2159 6155 5.871396 AGTTGTATGACTTCCGGTGATAT 57.129 39.130 0.00 0.00 0.00 1.63
2160 6156 5.416083 CAAGTTGTATGACTTCCGGTGATA 58.584 41.667 0.00 0.00 37.76 2.15
2161 6157 4.253685 CAAGTTGTATGACTTCCGGTGAT 58.746 43.478 0.00 0.00 37.76 3.06
2162 6158 3.659786 CAAGTTGTATGACTTCCGGTGA 58.340 45.455 0.00 0.00 37.76 4.02
2163 6159 2.159627 GCAAGTTGTATGACTTCCGGTG 59.840 50.000 0.00 0.00 37.76 4.94
2164 6160 2.423577 GCAAGTTGTATGACTTCCGGT 58.576 47.619 0.00 0.00 37.76 5.28
2165 6161 1.393539 CGCAAGTTGTATGACTTCCGG 59.606 52.381 4.48 0.00 37.21 5.14
2166 6162 1.201921 GCGCAAGTTGTATGACTTCCG 60.202 52.381 0.30 0.00 42.24 4.30
2167 6163 2.076863 AGCGCAAGTTGTATGACTTCC 58.923 47.619 11.47 0.00 37.76 3.46
2168 6164 2.222596 CGAGCGCAAGTTGTATGACTTC 60.223 50.000 11.47 0.00 37.76 3.01
2169 6165 1.726791 CGAGCGCAAGTTGTATGACTT 59.273 47.619 11.47 0.00 40.37 3.01
2170 6166 1.067846 TCGAGCGCAAGTTGTATGACT 60.068 47.619 11.47 0.00 41.68 3.41
2171 6167 1.346365 TCGAGCGCAAGTTGTATGAC 58.654 50.000 11.47 0.00 41.68 3.06
2172 6168 1.926510 CATCGAGCGCAAGTTGTATGA 59.073 47.619 11.47 0.00 41.68 2.15
2173 6169 1.660607 ACATCGAGCGCAAGTTGTATG 59.339 47.619 11.47 5.79 41.68 2.39
2174 6170 2.010145 ACATCGAGCGCAAGTTGTAT 57.990 45.000 11.47 0.00 41.68 2.29
2175 6171 1.724623 GAACATCGAGCGCAAGTTGTA 59.275 47.619 11.47 0.00 41.68 2.41
2176 6172 0.512952 GAACATCGAGCGCAAGTTGT 59.487 50.000 11.47 11.43 41.68 3.32
2177 6173 0.512518 TGAACATCGAGCGCAAGTTG 59.487 50.000 11.47 10.75 41.68 3.16
2178 6174 0.792640 CTGAACATCGAGCGCAAGTT 59.207 50.000 11.47 6.41 41.68 2.66
2179 6175 0.319900 ACTGAACATCGAGCGCAAGT 60.320 50.000 11.47 0.00 41.68 3.16
2180 6176 0.792640 AACTGAACATCGAGCGCAAG 59.207 50.000 11.47 2.24 43.44 4.01
2181 6177 1.069973 CAAACTGAACATCGAGCGCAA 60.070 47.619 11.47 0.00 0.00 4.85
2182 6178 0.512518 CAAACTGAACATCGAGCGCA 59.487 50.000 11.47 0.00 0.00 6.09
2183 6179 0.790207 TCAAACTGAACATCGAGCGC 59.210 50.000 0.00 0.00 0.00 5.92
2184 6180 3.859961 AGTATCAAACTGAACATCGAGCG 59.140 43.478 0.00 0.00 36.93 5.03
2185 6181 6.266323 TCTAGTATCAAACTGAACATCGAGC 58.734 40.000 0.00 0.00 39.39 5.03
2186 6182 7.971168 AGTTCTAGTATCAAACTGAACATCGAG 59.029 37.037 15.88 0.00 42.48 4.04
2187 6183 7.827701 AGTTCTAGTATCAAACTGAACATCGA 58.172 34.615 15.88 0.00 42.48 3.59
2188 6184 8.467402 AAGTTCTAGTATCAAACTGAACATCG 57.533 34.615 15.88 0.00 42.48 3.84
2207 6203 8.635328 ACCACAAATCCGTATTTTTAAAGTTCT 58.365 29.630 0.00 0.00 32.87 3.01
2208 6204 8.806177 ACCACAAATCCGTATTTTTAAAGTTC 57.194 30.769 0.00 0.00 32.87 3.01
2209 6205 8.414778 TGACCACAAATCCGTATTTTTAAAGTT 58.585 29.630 0.00 0.00 32.87 2.66
2210 6206 7.863877 GTGACCACAAATCCGTATTTTTAAAGT 59.136 33.333 0.00 0.00 32.87 2.66
2211 6207 7.327518 GGTGACCACAAATCCGTATTTTTAAAG 59.672 37.037 0.00 0.00 32.87 1.85
2212 6208 7.014422 AGGTGACCACAAATCCGTATTTTTAAA 59.986 33.333 3.63 0.00 32.87 1.52
2213 6209 6.490721 AGGTGACCACAAATCCGTATTTTTAA 59.509 34.615 3.63 0.00 32.87 1.52
2214 6210 6.005198 AGGTGACCACAAATCCGTATTTTTA 58.995 36.000 3.63 0.00 32.87 1.52
2215 6211 4.830600 AGGTGACCACAAATCCGTATTTTT 59.169 37.500 3.63 0.00 32.87 1.94
2216 6212 4.403734 AGGTGACCACAAATCCGTATTTT 58.596 39.130 3.63 0.00 32.87 1.82
2217 6213 4.028993 AGGTGACCACAAATCCGTATTT 57.971 40.909 3.63 0.00 35.65 1.40
2218 6214 3.713826 AGGTGACCACAAATCCGTATT 57.286 42.857 3.63 0.00 0.00 1.89
2219 6215 4.224370 AGTTAGGTGACCACAAATCCGTAT 59.776 41.667 3.63 0.00 0.00 3.06
2220 6216 3.579586 AGTTAGGTGACCACAAATCCGTA 59.420 43.478 3.63 0.00 0.00 4.02
2221 6217 2.370849 AGTTAGGTGACCACAAATCCGT 59.629 45.455 3.63 0.00 0.00 4.69
2222 6218 3.053831 AGTTAGGTGACCACAAATCCG 57.946 47.619 3.63 0.00 0.00 4.18
2223 6219 4.215613 GTCAAGTTAGGTGACCACAAATCC 59.784 45.833 3.63 0.00 39.62 3.01
2224 6220 4.819630 TGTCAAGTTAGGTGACCACAAATC 59.180 41.667 3.63 0.00 43.95 2.17
2225 6221 4.787551 TGTCAAGTTAGGTGACCACAAAT 58.212 39.130 3.63 0.00 43.95 2.32
2226 6222 4.223556 TGTCAAGTTAGGTGACCACAAA 57.776 40.909 3.63 0.00 43.95 2.83
2227 6223 3.916359 TGTCAAGTTAGGTGACCACAA 57.084 42.857 3.63 0.00 43.95 3.33
2228 6224 3.389656 TGATGTCAAGTTAGGTGACCACA 59.610 43.478 3.63 0.00 43.95 4.17
2229 6225 3.746492 GTGATGTCAAGTTAGGTGACCAC 59.254 47.826 3.63 0.00 43.95 4.16
2230 6226 3.554129 CGTGATGTCAAGTTAGGTGACCA 60.554 47.826 3.63 0.00 43.95 4.02
2231 6227 2.993899 CGTGATGTCAAGTTAGGTGACC 59.006 50.000 0.00 0.00 43.95 4.02
2232 6228 3.428870 CACGTGATGTCAAGTTAGGTGAC 59.571 47.826 10.90 0.00 44.67 3.67
2233 6229 3.649073 CACGTGATGTCAAGTTAGGTGA 58.351 45.455 10.90 0.00 36.46 4.02
2234 6230 2.157668 GCACGTGATGTCAAGTTAGGTG 59.842 50.000 22.23 0.00 36.46 4.00
2235 6231 2.224185 TGCACGTGATGTCAAGTTAGGT 60.224 45.455 22.23 0.00 36.46 3.08
2236 6232 2.412870 TGCACGTGATGTCAAGTTAGG 58.587 47.619 22.23 0.00 36.46 2.69
2237 6233 4.466567 TTTGCACGTGATGTCAAGTTAG 57.533 40.909 22.23 0.00 36.46 2.34
2238 6234 5.467063 TGTATTTGCACGTGATGTCAAGTTA 59.533 36.000 22.23 6.94 36.46 2.24
2239 6235 3.988379 ATTTGCACGTGATGTCAAGTT 57.012 38.095 22.23 2.88 36.46 2.66
2240 6236 3.812609 TGTATTTGCACGTGATGTCAAGT 59.187 39.130 22.23 12.72 39.07 3.16
2241 6237 4.083855 ACTGTATTTGCACGTGATGTCAAG 60.084 41.667 22.23 10.05 0.00 3.02
2242 6238 3.812609 ACTGTATTTGCACGTGATGTCAA 59.187 39.130 22.23 11.08 0.00 3.18
2243 6239 3.398406 ACTGTATTTGCACGTGATGTCA 58.602 40.909 22.23 4.34 0.00 3.58
2244 6240 3.431912 TGACTGTATTTGCACGTGATGTC 59.568 43.478 22.23 13.62 0.00 3.06
2245 6241 3.186409 GTGACTGTATTTGCACGTGATGT 59.814 43.478 22.23 4.01 0.00 3.06
2246 6242 3.186205 TGTGACTGTATTTGCACGTGATG 59.814 43.478 22.23 0.00 34.12 3.07
2247 6243 3.398406 TGTGACTGTATTTGCACGTGAT 58.602 40.909 22.23 6.60 34.12 3.06
2248 6244 2.827652 TGTGACTGTATTTGCACGTGA 58.172 42.857 22.23 0.00 34.12 4.35
2249 6245 3.600717 TTGTGACTGTATTTGCACGTG 57.399 42.857 12.28 12.28 34.12 4.49
2250 6246 4.142578 TGTTTTGTGACTGTATTTGCACGT 60.143 37.500 0.00 0.00 34.12 4.49
2251 6247 4.204168 GTGTTTTGTGACTGTATTTGCACG 59.796 41.667 0.00 0.00 34.12 5.34
2252 6248 4.204168 CGTGTTTTGTGACTGTATTTGCAC 59.796 41.667 0.00 0.00 0.00 4.57
2253 6249 4.142578 ACGTGTTTTGTGACTGTATTTGCA 60.143 37.500 0.00 0.00 0.00 4.08
2254 6250 4.204168 CACGTGTTTTGTGACTGTATTTGC 59.796 41.667 7.58 0.00 39.73 3.68
2255 6251 5.328691 ACACGTGTTTTGTGACTGTATTTG 58.671 37.500 17.22 0.00 39.73 2.32
2256 6252 5.554822 ACACGTGTTTTGTGACTGTATTT 57.445 34.783 17.22 0.00 39.73 1.40
2257 6253 6.293190 CCATACACGTGTTTTGTGACTGTATT 60.293 38.462 28.55 0.00 39.73 1.89
2258 6254 5.178623 CCATACACGTGTTTTGTGACTGTAT 59.821 40.000 28.55 6.42 39.73 2.29
2259 6255 4.508492 CCATACACGTGTTTTGTGACTGTA 59.492 41.667 28.55 3.91 39.73 2.74
2260 6256 3.311322 CCATACACGTGTTTTGTGACTGT 59.689 43.478 28.55 0.00 39.73 3.55
2261 6257 3.558006 TCCATACACGTGTTTTGTGACTG 59.442 43.478 28.55 11.37 39.73 3.51
2262 6258 3.558418 GTCCATACACGTGTTTTGTGACT 59.442 43.478 28.55 0.00 39.73 3.41
2263 6259 3.602946 CGTCCATACACGTGTTTTGTGAC 60.603 47.826 28.55 25.36 39.73 3.67
2264 6260 2.540516 CGTCCATACACGTGTTTTGTGA 59.459 45.455 28.55 18.62 39.73 3.58
2265 6261 2.898746 CGTCCATACACGTGTTTTGTG 58.101 47.619 28.55 18.90 42.99 3.33
2274 6270 3.049912 CACCATGATACGTCCATACACG 58.950 50.000 0.00 0.00 45.65 4.49
2275 6271 3.802139 CACACCATGATACGTCCATACAC 59.198 47.826 0.00 0.00 0.00 2.90
2276 6272 3.449377 ACACACCATGATACGTCCATACA 59.551 43.478 0.00 0.00 0.00 2.29
2277 6273 3.802139 CACACACCATGATACGTCCATAC 59.198 47.826 0.00 0.00 0.00 2.39
2278 6274 3.181470 CCACACACCATGATACGTCCATA 60.181 47.826 0.00 0.00 0.00 2.74
2279 6275 2.419990 CCACACACCATGATACGTCCAT 60.420 50.000 0.00 0.00 0.00 3.41
2280 6276 1.066502 CCACACACCATGATACGTCCA 60.067 52.381 0.00 0.00 0.00 4.02
2281 6277 1.651987 CCACACACCATGATACGTCC 58.348 55.000 0.00 0.00 0.00 4.79
2282 6278 1.006832 GCCACACACCATGATACGTC 58.993 55.000 0.00 0.00 0.00 4.34
2283 6279 0.392461 GGCCACACACCATGATACGT 60.392 55.000 0.00 0.00 0.00 3.57
2284 6280 1.095228 GGGCCACACACCATGATACG 61.095 60.000 4.39 0.00 0.00 3.06
2285 6281 0.751643 GGGGCCACACACCATGATAC 60.752 60.000 4.39 0.00 0.00 2.24
2286 6282 1.210885 TGGGGCCACACACCATGATA 61.211 55.000 1.54 0.00 0.00 2.15
2287 6283 2.360191 GGGGCCACACACCATGAT 59.640 61.111 4.39 0.00 0.00 2.45
2288 6284 3.181530 TGGGGCCACACACCATGA 61.182 61.111 1.54 0.00 0.00 3.07
2289 6285 2.990967 GTGGGGCCACACACCATG 60.991 66.667 33.55 0.00 45.53 3.66
2297 6293 3.553095 GACTCACAGGTGGGGCCAC 62.553 68.421 4.39 0.00 45.49 5.01
2298 6294 3.249189 GACTCACAGGTGGGGCCA 61.249 66.667 4.39 0.00 40.61 5.36
2299 6295 3.249189 TGACTCACAGGTGGGGCC 61.249 66.667 2.03 0.00 38.69 5.80
2300 6296 2.177594 CTCTGACTCACAGGTGGGGC 62.178 65.000 4.07 0.35 45.76 5.80
2301 6297 0.542938 TCTCTGACTCACAGGTGGGG 60.543 60.000 4.07 0.00 45.76 4.96
2302 6298 1.206610 CATCTCTGACTCACAGGTGGG 59.793 57.143 0.00 0.00 45.76 4.61
2303 6299 1.206610 CCATCTCTGACTCACAGGTGG 59.793 57.143 0.00 0.00 45.76 4.61
2304 6300 1.405256 GCCATCTCTGACTCACAGGTG 60.405 57.143 0.00 0.00 45.76 4.00
2305 6301 0.901124 GCCATCTCTGACTCACAGGT 59.099 55.000 0.00 0.00 45.76 4.00
2306 6302 0.900421 TGCCATCTCTGACTCACAGG 59.100 55.000 0.00 0.00 45.76 4.00
2307 6303 1.134759 CCTGCCATCTCTGACTCACAG 60.135 57.143 0.00 0.00 46.97 3.66
2308 6304 0.900421 CCTGCCATCTCTGACTCACA 59.100 55.000 0.00 0.00 0.00 3.58
2309 6305 0.901124 ACCTGCCATCTCTGACTCAC 59.099 55.000 0.00 0.00 0.00 3.51
2310 6306 2.103373 GTACCTGCCATCTCTGACTCA 58.897 52.381 0.00 0.00 0.00 3.41
2311 6307 1.066303 CGTACCTGCCATCTCTGACTC 59.934 57.143 0.00 0.00 0.00 3.36
2312 6308 1.107114 CGTACCTGCCATCTCTGACT 58.893 55.000 0.00 0.00 0.00 3.41
2313 6309 1.103803 TCGTACCTGCCATCTCTGAC 58.896 55.000 0.00 0.00 0.00 3.51
2314 6310 1.847328 TTCGTACCTGCCATCTCTGA 58.153 50.000 0.00 0.00 0.00 3.27
2315 6311 2.093973 AGTTTCGTACCTGCCATCTCTG 60.094 50.000 0.00 0.00 0.00 3.35
2316 6312 2.166664 GAGTTTCGTACCTGCCATCTCT 59.833 50.000 0.00 0.00 0.00 3.10
2317 6313 2.541556 GAGTTTCGTACCTGCCATCTC 58.458 52.381 0.00 0.00 0.00 2.75
2318 6314 1.207329 GGAGTTTCGTACCTGCCATCT 59.793 52.381 0.00 0.00 0.00 2.90
2319 6315 1.653151 GGAGTTTCGTACCTGCCATC 58.347 55.000 0.00 0.00 0.00 3.51
2320 6316 0.252197 GGGAGTTTCGTACCTGCCAT 59.748 55.000 3.11 0.00 0.00 4.40
2321 6317 0.834687 AGGGAGTTTCGTACCTGCCA 60.835 55.000 9.46 0.00 30.71 4.92
2322 6318 0.108281 GAGGGAGTTTCGTACCTGCC 60.108 60.000 0.02 0.02 32.42 4.85
2323 6319 0.458025 CGAGGGAGTTTCGTACCTGC 60.458 60.000 0.00 0.00 32.42 4.85
2324 6320 0.458025 GCGAGGGAGTTTCGTACCTG 60.458 60.000 0.00 0.00 40.08 4.00
2325 6321 0.611340 AGCGAGGGAGTTTCGTACCT 60.611 55.000 0.00 0.00 40.08 3.08
2326 6322 0.245813 AAGCGAGGGAGTTTCGTACC 59.754 55.000 0.00 0.00 40.08 3.34
2327 6323 2.075979 AAAGCGAGGGAGTTTCGTAC 57.924 50.000 0.00 0.00 40.08 3.67
2328 6324 2.825861 AAAAGCGAGGGAGTTTCGTA 57.174 45.000 0.00 0.00 40.08 3.43
2329 6325 1.963172 AAAAAGCGAGGGAGTTTCGT 58.037 45.000 0.00 0.00 40.08 3.85
2346 6342 8.900983 ATGGTTAGCTTTTCTGCAAATAAAAA 57.099 26.923 0.00 0.00 34.99 1.94
2347 6343 8.772705 CAATGGTTAGCTTTTCTGCAAATAAAA 58.227 29.630 0.00 0.00 34.99 1.52
2348 6344 7.930865 ACAATGGTTAGCTTTTCTGCAAATAAA 59.069 29.630 0.00 0.00 34.99 1.40
2349 6345 7.441017 ACAATGGTTAGCTTTTCTGCAAATAA 58.559 30.769 0.00 0.00 34.99 1.40
2350 6346 6.991938 ACAATGGTTAGCTTTTCTGCAAATA 58.008 32.000 0.00 0.00 34.99 1.40
2351 6347 5.857268 ACAATGGTTAGCTTTTCTGCAAAT 58.143 33.333 0.00 0.00 34.99 2.32
2352 6348 5.275067 ACAATGGTTAGCTTTTCTGCAAA 57.725 34.783 0.00 0.00 34.99 3.68
2353 6349 4.935352 ACAATGGTTAGCTTTTCTGCAA 57.065 36.364 0.00 0.00 34.99 4.08
2354 6350 5.048782 CAGTACAATGGTTAGCTTTTCTGCA 60.049 40.000 0.00 0.00 34.99 4.41
2355 6351 5.393962 CAGTACAATGGTTAGCTTTTCTGC 58.606 41.667 0.00 0.00 0.00 4.26
2356 6352 5.705441 TCCAGTACAATGGTTAGCTTTTCTG 59.295 40.000 0.00 0.00 41.43 3.02
2357 6353 5.876357 TCCAGTACAATGGTTAGCTTTTCT 58.124 37.500 0.00 0.00 41.43 2.52
2358 6354 6.759497 ATCCAGTACAATGGTTAGCTTTTC 57.241 37.500 0.00 0.00 41.43 2.29
2359 6355 8.686334 CATTATCCAGTACAATGGTTAGCTTTT 58.314 33.333 0.00 0.00 41.43 2.27
2360 6356 7.285401 CCATTATCCAGTACAATGGTTAGCTTT 59.715 37.037 11.86 0.00 42.43 3.51
2361 6357 6.772716 CCATTATCCAGTACAATGGTTAGCTT 59.227 38.462 11.86 0.00 42.43 3.74
2362 6358 6.299141 CCATTATCCAGTACAATGGTTAGCT 58.701 40.000 11.86 0.00 42.43 3.32
2363 6359 6.560253 CCATTATCCAGTACAATGGTTAGC 57.440 41.667 11.86 0.00 42.43 3.09
2369 6365 7.780008 TTTCGTACCATTATCCAGTACAATG 57.220 36.000 0.00 0.00 36.91 2.82
2370 6366 8.974060 ATTTTCGTACCATTATCCAGTACAAT 57.026 30.769 0.00 0.00 36.91 2.71
2371 6367 8.795842 AATTTTCGTACCATTATCCAGTACAA 57.204 30.769 0.00 0.00 36.91 2.41
2372 6368 9.887629 TTAATTTTCGTACCATTATCCAGTACA 57.112 29.630 0.00 0.00 36.91 2.90
2403 6399 1.182667 GAACAGGCGCCCCTATTTTT 58.817 50.000 26.15 2.67 40.33 1.94
2404 6400 0.331616 AGAACAGGCGCCCCTATTTT 59.668 50.000 26.15 3.13 40.33 1.82
2405 6401 0.107165 GAGAACAGGCGCCCCTATTT 60.107 55.000 26.15 9.21 40.33 1.40
2406 6402 1.527370 GAGAACAGGCGCCCCTATT 59.473 57.895 26.15 12.65 40.33 1.73
2407 6403 2.797278 CGAGAACAGGCGCCCCTAT 61.797 63.158 26.15 7.15 40.33 2.57
2408 6404 3.458163 CGAGAACAGGCGCCCCTA 61.458 66.667 26.15 0.00 40.33 3.53
2410 6406 4.388499 TTCGAGAACAGGCGCCCC 62.388 66.667 26.15 10.40 0.00 5.80
2411 6407 3.119096 GTTCGAGAACAGGCGCCC 61.119 66.667 26.15 7.74 40.84 6.13
2412 6408 3.119096 GGTTCGAGAACAGGCGCC 61.119 66.667 21.89 21.89 42.85 6.53
2413 6409 3.119096 GGGTTCGAGAACAGGCGC 61.119 66.667 16.56 0.00 42.85 6.53
2414 6410 2.434359 GGGGTTCGAGAACAGGCG 60.434 66.667 16.56 0.00 42.85 5.52
2415 6411 1.072505 TTGGGGTTCGAGAACAGGC 59.927 57.895 16.56 1.07 42.85 4.85
2416 6412 0.107831 TGTTGGGGTTCGAGAACAGG 59.892 55.000 16.56 0.00 42.85 4.00
2417 6413 1.961793 TTGTTGGGGTTCGAGAACAG 58.038 50.000 16.56 0.00 42.85 3.16
2418 6414 2.018515 GTTTGTTGGGGTTCGAGAACA 58.981 47.619 16.56 0.00 42.85 3.18
2419 6415 1.003223 CGTTTGTTGGGGTTCGAGAAC 60.003 52.381 7.40 7.40 40.45 3.01
2420 6416 1.134461 TCGTTTGTTGGGGTTCGAGAA 60.134 47.619 0.00 0.00 0.00 2.87
2421 6417 0.464870 TCGTTTGTTGGGGTTCGAGA 59.535 50.000 0.00 0.00 0.00 4.04
2422 6418 1.463444 GATCGTTTGTTGGGGTTCGAG 59.537 52.381 0.00 0.00 0.00 4.04
2423 6419 1.202663 TGATCGTTTGTTGGGGTTCGA 60.203 47.619 0.00 0.00 0.00 3.71
2424 6420 1.069500 GTGATCGTTTGTTGGGGTTCG 60.069 52.381 0.00 0.00 0.00 3.95
2425 6421 1.950909 TGTGATCGTTTGTTGGGGTTC 59.049 47.619 0.00 0.00 0.00 3.62
2426 6422 2.060050 TGTGATCGTTTGTTGGGGTT 57.940 45.000 0.00 0.00 0.00 4.11
2427 6423 1.679153 GTTGTGATCGTTTGTTGGGGT 59.321 47.619 0.00 0.00 0.00 4.95
2428 6424 1.678627 TGTTGTGATCGTTTGTTGGGG 59.321 47.619 0.00 0.00 0.00 4.96
2429 6425 2.098280 TGTGTTGTGATCGTTTGTTGGG 59.902 45.455 0.00 0.00 0.00 4.12
2430 6426 3.412981 TGTGTTGTGATCGTTTGTTGG 57.587 42.857 0.00 0.00 0.00 3.77
2431 6427 3.240401 GCTTGTGTTGTGATCGTTTGTTG 59.760 43.478 0.00 0.00 0.00 3.33
2432 6428 3.434637 GCTTGTGTTGTGATCGTTTGTT 58.565 40.909 0.00 0.00 0.00 2.83
2433 6429 2.223479 GGCTTGTGTTGTGATCGTTTGT 60.223 45.455 0.00 0.00 0.00 2.83
2434 6430 2.223456 TGGCTTGTGTTGTGATCGTTTG 60.223 45.455 0.00 0.00 0.00 2.93
2435 6431 2.020720 TGGCTTGTGTTGTGATCGTTT 58.979 42.857 0.00 0.00 0.00 3.60
2436 6432 1.603802 CTGGCTTGTGTTGTGATCGTT 59.396 47.619 0.00 0.00 0.00 3.85
2437 6433 1.229428 CTGGCTTGTGTTGTGATCGT 58.771 50.000 0.00 0.00 0.00 3.73
2438 6434 1.195448 GACTGGCTTGTGTTGTGATCG 59.805 52.381 0.00 0.00 0.00 3.69
2439 6435 2.498167 AGACTGGCTTGTGTTGTGATC 58.502 47.619 0.00 0.00 0.00 2.92
2440 6436 2.645838 AGACTGGCTTGTGTTGTGAT 57.354 45.000 0.00 0.00 0.00 3.06
2441 6437 3.202906 GTTAGACTGGCTTGTGTTGTGA 58.797 45.455 0.00 0.00 0.00 3.58
2442 6438 2.290641 GGTTAGACTGGCTTGTGTTGTG 59.709 50.000 0.00 0.00 0.00 3.33
2443 6439 2.092646 TGGTTAGACTGGCTTGTGTTGT 60.093 45.455 0.00 0.00 0.00 3.32
2444 6440 2.571212 TGGTTAGACTGGCTTGTGTTG 58.429 47.619 0.00 0.00 0.00 3.33
2445 6441 3.290948 TTGGTTAGACTGGCTTGTGTT 57.709 42.857 0.00 0.00 0.00 3.32
2446 6442 3.073062 AGATTGGTTAGACTGGCTTGTGT 59.927 43.478 0.00 0.00 0.00 3.72
2447 6443 3.679389 AGATTGGTTAGACTGGCTTGTG 58.321 45.455 0.00 0.00 0.00 3.33
2448 6444 5.246307 GTTAGATTGGTTAGACTGGCTTGT 58.754 41.667 0.00 0.00 0.00 3.16
2449 6445 4.636206 GGTTAGATTGGTTAGACTGGCTTG 59.364 45.833 0.00 0.00 0.00 4.01
2450 6446 4.536489 AGGTTAGATTGGTTAGACTGGCTT 59.464 41.667 0.00 0.00 0.00 4.35
2451 6447 4.104831 AGGTTAGATTGGTTAGACTGGCT 58.895 43.478 0.00 0.00 0.00 4.75
2452 6448 4.489306 AGGTTAGATTGGTTAGACTGGC 57.511 45.455 0.00 0.00 0.00 4.85
2453 6449 5.875359 GTGAAGGTTAGATTGGTTAGACTGG 59.125 44.000 0.00 0.00 0.00 4.00
2454 6450 5.577164 CGTGAAGGTTAGATTGGTTAGACTG 59.423 44.000 0.00 0.00 0.00 3.51
2455 6451 5.245526 ACGTGAAGGTTAGATTGGTTAGACT 59.754 40.000 0.00 0.00 0.00 3.24
2456 6452 5.476614 ACGTGAAGGTTAGATTGGTTAGAC 58.523 41.667 0.00 0.00 0.00 2.59
2457 6453 5.733620 ACGTGAAGGTTAGATTGGTTAGA 57.266 39.130 0.00 0.00 0.00 2.10
2458 6454 5.350640 GGAACGTGAAGGTTAGATTGGTTAG 59.649 44.000 0.00 0.00 0.00 2.34
2459 6455 5.240121 GGAACGTGAAGGTTAGATTGGTTA 58.760 41.667 0.00 0.00 0.00 2.85
2460 6456 4.070009 GGAACGTGAAGGTTAGATTGGTT 58.930 43.478 0.00 0.00 0.00 3.67
2461 6457 3.558533 GGGAACGTGAAGGTTAGATTGGT 60.559 47.826 0.00 0.00 0.00 3.67
2462 6458 3.007635 GGGAACGTGAAGGTTAGATTGG 58.992 50.000 0.00 0.00 0.00 3.16
2463 6459 3.435671 GTGGGAACGTGAAGGTTAGATTG 59.564 47.826 0.00 0.00 0.00 2.67
2464 6460 3.558533 GGTGGGAACGTGAAGGTTAGATT 60.559 47.826 0.00 0.00 0.00 2.40
2465 6461 2.027469 GGTGGGAACGTGAAGGTTAGAT 60.027 50.000 0.00 0.00 0.00 1.98
2466 6462 1.345415 GGTGGGAACGTGAAGGTTAGA 59.655 52.381 0.00 0.00 0.00 2.10
2467 6463 1.346722 AGGTGGGAACGTGAAGGTTAG 59.653 52.381 0.00 0.00 0.00 2.34
2468 6464 1.345415 GAGGTGGGAACGTGAAGGTTA 59.655 52.381 0.00 0.00 0.00 2.85
2469 6465 0.108019 GAGGTGGGAACGTGAAGGTT 59.892 55.000 0.00 0.00 0.00 3.50
2470 6466 1.052124 TGAGGTGGGAACGTGAAGGT 61.052 55.000 0.00 0.00 0.00 3.50
2471 6467 0.324943 ATGAGGTGGGAACGTGAAGG 59.675 55.000 0.00 0.00 0.00 3.46
2472 6468 1.270839 ACATGAGGTGGGAACGTGAAG 60.271 52.381 0.00 0.00 0.00 3.02
2473 6469 0.762418 ACATGAGGTGGGAACGTGAA 59.238 50.000 0.00 0.00 0.00 3.18
2474 6470 1.634960 TACATGAGGTGGGAACGTGA 58.365 50.000 0.00 0.00 0.00 4.35
2475 6471 2.279741 CATACATGAGGTGGGAACGTG 58.720 52.381 0.00 0.00 0.00 4.49
2476 6472 1.209504 CCATACATGAGGTGGGAACGT 59.790 52.381 0.00 0.00 0.00 3.99
2477 6473 1.484653 TCCATACATGAGGTGGGAACG 59.515 52.381 0.00 0.00 33.10 3.95
2478 6474 3.864789 ATCCATACATGAGGTGGGAAC 57.135 47.619 0.00 0.00 37.68 3.62
2479 6475 3.650942 GGTATCCATACATGAGGTGGGAA 59.349 47.826 0.00 0.00 37.68 3.97
2480 6476 3.248024 GGTATCCATACATGAGGTGGGA 58.752 50.000 0.00 0.00 38.26 4.37
2481 6477 2.978978 TGGTATCCATACATGAGGTGGG 59.021 50.000 0.00 0.00 34.98 4.61
2482 6478 4.705110 TTGGTATCCATACATGAGGTGG 57.295 45.455 0.00 4.54 34.98 4.61
2483 6479 4.821805 GGTTTGGTATCCATACATGAGGTG 59.178 45.833 0.00 0.00 37.23 4.00
2484 6480 4.726825 AGGTTTGGTATCCATACATGAGGT 59.273 41.667 0.00 0.00 37.23 3.85
2485 6481 5.310409 AGGTTTGGTATCCATACATGAGG 57.690 43.478 0.00 0.00 37.23 3.86
2486 6482 6.826668 TGTAGGTTTGGTATCCATACATGAG 58.173 40.000 0.00 0.00 37.23 2.90
2487 6483 6.816616 TGTAGGTTTGGTATCCATACATGA 57.183 37.500 0.00 0.00 37.23 3.07
2488 6484 6.998074 ACATGTAGGTTTGGTATCCATACATG 59.002 38.462 23.78 23.78 42.65 3.21
2489 6485 7.149202 ACATGTAGGTTTGGTATCCATACAT 57.851 36.000 0.00 8.55 37.23 2.29
2490 6486 6.569127 ACATGTAGGTTTGGTATCCATACA 57.431 37.500 0.00 6.95 37.23 2.29
2493 6489 9.166222 TCTAATACATGTAGGTTTGGTATCCAT 57.834 33.333 11.91 0.00 31.53 3.41
2494 6490 8.426489 GTCTAATACATGTAGGTTTGGTATCCA 58.574 37.037 11.91 0.00 0.00 3.41
2495 6491 7.597743 CGTCTAATACATGTAGGTTTGGTATCC 59.402 40.741 11.91 0.00 0.00 2.59
2496 6492 8.139989 ACGTCTAATACATGTAGGTTTGGTATC 58.860 37.037 11.91 0.00 0.00 2.24
2497 6493 7.924412 CACGTCTAATACATGTAGGTTTGGTAT 59.076 37.037 11.91 0.00 0.00 2.73
2498 6494 7.259882 CACGTCTAATACATGTAGGTTTGGTA 58.740 38.462 11.91 0.00 0.00 3.25
2499 6495 6.103997 CACGTCTAATACATGTAGGTTTGGT 58.896 40.000 11.91 3.03 0.00 3.67
2500 6496 5.522460 CCACGTCTAATACATGTAGGTTTGG 59.478 44.000 11.91 7.32 0.00 3.28
2501 6497 5.522460 CCCACGTCTAATACATGTAGGTTTG 59.478 44.000 11.91 3.36 0.00 2.93
2502 6498 5.422970 TCCCACGTCTAATACATGTAGGTTT 59.577 40.000 11.91 3.70 0.00 3.27
2503 6499 4.957954 TCCCACGTCTAATACATGTAGGTT 59.042 41.667 11.91 4.42 0.00 3.50
2504 6500 4.539726 TCCCACGTCTAATACATGTAGGT 58.460 43.478 11.91 4.51 0.00 3.08
2505 6501 4.558898 GCTCCCACGTCTAATACATGTAGG 60.559 50.000 11.91 4.30 0.00 3.18
2506 6502 4.278669 AGCTCCCACGTCTAATACATGTAG 59.721 45.833 11.91 0.00 0.00 2.74
2507 6503 4.212716 AGCTCCCACGTCTAATACATGTA 58.787 43.478 8.27 8.27 0.00 2.29
2508 6504 3.031736 AGCTCCCACGTCTAATACATGT 58.968 45.455 2.69 2.69 0.00 3.21
2509 6505 3.735237 AGCTCCCACGTCTAATACATG 57.265 47.619 0.00 0.00 0.00 3.21
2510 6506 5.864418 TTAAGCTCCCACGTCTAATACAT 57.136 39.130 0.00 0.00 0.00 2.29
2511 6507 5.664294 TTTAAGCTCCCACGTCTAATACA 57.336 39.130 0.00 0.00 0.00 2.29
2512 6508 6.200475 GTGATTTAAGCTCCCACGTCTAATAC 59.800 42.308 0.00 0.00 0.00 1.89
2513 6509 6.127281 TGTGATTTAAGCTCCCACGTCTAATA 60.127 38.462 0.00 0.00 0.00 0.98
2514 6510 5.116882 GTGATTTAAGCTCCCACGTCTAAT 58.883 41.667 0.00 0.00 0.00 1.73
2515 6511 4.020928 TGTGATTTAAGCTCCCACGTCTAA 60.021 41.667 0.00 0.00 0.00 2.10
2516 6512 3.512329 TGTGATTTAAGCTCCCACGTCTA 59.488 43.478 0.00 0.00 0.00 2.59
2517 6513 2.301870 TGTGATTTAAGCTCCCACGTCT 59.698 45.455 0.00 0.00 0.00 4.18
2518 6514 2.695359 TGTGATTTAAGCTCCCACGTC 58.305 47.619 0.00 0.00 0.00 4.34
2519 6515 2.851263 TGTGATTTAAGCTCCCACGT 57.149 45.000 0.00 0.00 0.00 4.49
2520 6516 4.701956 AAATGTGATTTAAGCTCCCACG 57.298 40.909 0.00 0.00 0.00 4.94
2521 6517 8.000780 AGAATAAATGTGATTTAAGCTCCCAC 57.999 34.615 0.00 0.00 38.15 4.61
2522 6518 8.593945 AAGAATAAATGTGATTTAAGCTCCCA 57.406 30.769 0.00 0.00 38.15 4.37
2523 6519 9.521503 GAAAGAATAAATGTGATTTAAGCTCCC 57.478 33.333 0.00 0.00 38.15 4.30
2556 6552 3.128375 CTGGCGGCCACACTTTTT 58.872 55.556 19.77 0.00 0.00 1.94
2557 6553 3.605664 GCTGGCGGCCACACTTTT 61.606 61.111 19.77 0.00 34.27 2.27
2558 6554 4.586235 AGCTGGCGGCCACACTTT 62.586 61.111 19.77 0.00 43.05 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.