Multiple sequence alignment - TraesCS7D01G077200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G077200 | chr7D | 100.000 | 3584 | 0 | 0 | 1 | 3584 | 45515309 | 45511726 | 0.000000e+00 | 6619.0 |
1 | TraesCS7D01G077200 | chr4A | 89.370 | 2126 | 172 | 22 | 934 | 3025 | 658824308 | 658826413 | 0.000000e+00 | 2625.0 |
2 | TraesCS7D01G077200 | chr4A | 85.604 | 1938 | 218 | 34 | 937 | 2853 | 657501050 | 657499153 | 0.000000e+00 | 1977.0 |
3 | TraesCS7D01G077200 | chr4A | 84.645 | 1283 | 152 | 17 | 1 | 1239 | 657502182 | 657500901 | 0.000000e+00 | 1236.0 |
4 | TraesCS7D01G077200 | chr4A | 85.744 | 954 | 130 | 3 | 289 | 1239 | 658823510 | 658824460 | 0.000000e+00 | 1003.0 |
5 | TraesCS7D01G077200 | chr4A | 88.710 | 186 | 13 | 5 | 3250 | 3428 | 657499154 | 657498970 | 1.680000e-53 | 220.0 |
6 | TraesCS7D01G077200 | chr4A | 86.923 | 130 | 11 | 2 | 2899 | 3028 | 657499393 | 657499270 | 1.340000e-29 | 141.0 |
7 | TraesCS7D01G077200 | chr4A | 94.318 | 88 | 5 | 0 | 3033 | 3120 | 658826473 | 658826560 | 6.240000e-28 | 135.0 |
8 | TraesCS7D01G077200 | chr4A | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 657499441 | 657499414 | 6.000000e-03 | 52.8 |
9 | TraesCS7D01G077200 | chr7A | 91.199 | 1534 | 115 | 10 | 1082 | 2606 | 47574353 | 47572831 | 0.000000e+00 | 2067.0 |
10 | TraesCS7D01G077200 | chr7A | 90.951 | 1536 | 115 | 14 | 1082 | 2606 | 47608771 | 47607249 | 0.000000e+00 | 2045.0 |
11 | TraesCS7D01G077200 | chr7A | 90.874 | 1534 | 120 | 10 | 1082 | 2606 | 47588495 | 47586973 | 0.000000e+00 | 2039.0 |
12 | TraesCS7D01G077200 | chr7A | 90.037 | 803 | 80 | 0 | 285 | 1087 | 47574997 | 47574195 | 0.000000e+00 | 1040.0 |
13 | TraesCS7D01G077200 | chr7A | 89.788 | 803 | 82 | 0 | 285 | 1087 | 47589139 | 47588337 | 0.000000e+00 | 1029.0 |
14 | TraesCS7D01G077200 | chr7A | 89.788 | 803 | 82 | 0 | 285 | 1087 | 47609415 | 47608613 | 0.000000e+00 | 1029.0 |
15 | TraesCS7D01G077200 | chr7A | 89.906 | 426 | 25 | 9 | 3163 | 3584 | 47586541 | 47586130 | 1.890000e-147 | 532.0 |
16 | TraesCS7D01G077200 | chr7A | 89.696 | 427 | 25 | 10 | 3163 | 3584 | 47572408 | 47571996 | 8.810000e-146 | 527.0 |
17 | TraesCS7D01G077200 | chr7A | 89.437 | 426 | 26 | 10 | 3163 | 3584 | 47606826 | 47606416 | 1.470000e-143 | 520.0 |
18 | TraesCS7D01G077200 | chr7A | 93.040 | 273 | 19 | 0 | 285 | 557 | 47592858 | 47592586 | 2.000000e-107 | 399.0 |
19 | TraesCS7D01G077200 | chr7A | 93.040 | 273 | 19 | 0 | 285 | 557 | 47595531 | 47595259 | 2.000000e-107 | 399.0 |
20 | TraesCS7D01G077200 | chr7A | 79.562 | 274 | 24 | 14 | 2899 | 3148 | 47572770 | 47572505 | 2.210000e-37 | 167.0 |
21 | TraesCS7D01G077200 | chr7A | 79.562 | 274 | 24 | 14 | 2899 | 3148 | 47607188 | 47606923 | 2.210000e-37 | 167.0 |
22 | TraesCS7D01G077200 | chr7A | 79.197 | 274 | 25 | 14 | 2899 | 3148 | 47586903 | 47586638 | 1.030000e-35 | 161.0 |
23 | TraesCS7D01G077200 | chr7A | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 47572506 | 47572476 | 1.390000e-04 | 58.4 |
24 | TraesCS7D01G077200 | chr7A | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 47586639 | 47586609 | 1.390000e-04 | 58.4 |
25 | TraesCS7D01G077200 | chr7A | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 47606924 | 47606894 | 1.390000e-04 | 58.4 |
26 | TraesCS7D01G077200 | chr7A | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 47572821 | 47572794 | 6.000000e-03 | 52.8 |
27 | TraesCS7D01G077200 | chr7A | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 47586954 | 47586927 | 6.000000e-03 | 52.8 |
28 | TraesCS7D01G077200 | chr7A | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 47607239 | 47607212 | 6.000000e-03 | 52.8 |
29 | TraesCS7D01G077200 | chrUn | 91.081 | 1536 | 113 | 14 | 1082 | 2606 | 264365965 | 264364443 | 0.000000e+00 | 2056.0 |
30 | TraesCS7D01G077200 | chrUn | 91.021 | 1537 | 118 | 10 | 1079 | 2606 | 317692232 | 317693757 | 0.000000e+00 | 2056.0 |
31 | TraesCS7D01G077200 | chrUn | 90.630 | 1206 | 95 | 9 | 1079 | 2274 | 399199836 | 399201033 | 0.000000e+00 | 1585.0 |
32 | TraesCS7D01G077200 | chrUn | 90.037 | 803 | 80 | 0 | 285 | 1087 | 370956465 | 370957267 | 0.000000e+00 | 1040.0 |
33 | TraesCS7D01G077200 | chrUn | 89.788 | 803 | 82 | 0 | 285 | 1087 | 264366609 | 264365807 | 0.000000e+00 | 1029.0 |
34 | TraesCS7D01G077200 | chrUn | 88.339 | 626 | 70 | 1 | 1079 | 1704 | 370957106 | 370957728 | 0.000000e+00 | 749.0 |
35 | TraesCS7D01G077200 | chrUn | 89.906 | 426 | 25 | 9 | 3163 | 3584 | 317694189 | 317694600 | 1.890000e-147 | 532.0 |
36 | TraesCS7D01G077200 | chrUn | 89.437 | 426 | 26 | 10 | 3163 | 3584 | 414619655 | 414620065 | 1.470000e-143 | 520.0 |
37 | TraesCS7D01G077200 | chrUn | 88.967 | 426 | 27 | 11 | 3163 | 3584 | 362061210 | 362061619 | 3.190000e-140 | 508.0 |
38 | TraesCS7D01G077200 | chrUn | 93.009 | 329 | 17 | 5 | 2279 | 2606 | 362060464 | 362060787 | 3.240000e-130 | 475.0 |
39 | TraesCS7D01G077200 | chrUn | 93.009 | 329 | 17 | 5 | 2279 | 2606 | 414618909 | 414619232 | 3.240000e-130 | 475.0 |
40 | TraesCS7D01G077200 | chrUn | 79.562 | 274 | 24 | 14 | 2899 | 3148 | 414619293 | 414619558 | 2.210000e-37 | 167.0 |
41 | TraesCS7D01G077200 | chrUn | 79.197 | 274 | 25 | 14 | 2899 | 3148 | 317693827 | 317694092 | 1.030000e-35 | 161.0 |
42 | TraesCS7D01G077200 | chrUn | 79.197 | 274 | 25 | 14 | 2899 | 3148 | 362060848 | 362061113 | 1.030000e-35 | 161.0 |
43 | TraesCS7D01G077200 | chrUn | 83.740 | 123 | 16 | 4 | 2899 | 3021 | 264364382 | 264364264 | 2.920000e-21 | 113.0 |
44 | TraesCS7D01G077200 | chrUn | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 317694091 | 317694121 | 1.390000e-04 | 58.4 |
45 | TraesCS7D01G077200 | chrUn | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 362061112 | 362061142 | 1.390000e-04 | 58.4 |
46 | TraesCS7D01G077200 | chrUn | 100.000 | 31 | 0 | 0 | 3136 | 3166 | 414619557 | 414619587 | 1.390000e-04 | 58.4 |
47 | TraesCS7D01G077200 | chrUn | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 317693776 | 317693803 | 6.000000e-03 | 52.8 |
48 | TraesCS7D01G077200 | chrUn | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 362060797 | 362060824 | 6.000000e-03 | 52.8 |
49 | TraesCS7D01G077200 | chrUn | 100.000 | 28 | 0 | 0 | 2868 | 2895 | 414619242 | 414619269 | 6.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G077200 | chr7D | 45511726 | 45515309 | 3583 | True | 6619.000000 | 6619 | 100.000000 | 1 | 3584 | 1 | chr7D.!!$R1 | 3583 |
1 | TraesCS7D01G077200 | chr4A | 658823510 | 658826560 | 3050 | False | 1254.333333 | 2625 | 89.810667 | 289 | 3120 | 3 | chr4A.!!$F1 | 2831 |
2 | TraesCS7D01G077200 | chr4A | 657498970 | 657502182 | 3212 | True | 725.360000 | 1977 | 89.176400 | 1 | 3428 | 5 | chr4A.!!$R1 | 3427 |
3 | TraesCS7D01G077200 | chr7A | 47571996 | 47574997 | 3001 | True | 652.033333 | 2067 | 91.749000 | 285 | 3584 | 6 | chr7A.!!$R1 | 3299 |
4 | TraesCS7D01G077200 | chr7A | 47606416 | 47609415 | 2999 | True | 645.366667 | 2045 | 91.623000 | 285 | 3584 | 6 | chr7A.!!$R3 | 3299 |
5 | TraesCS7D01G077200 | chr7A | 47586130 | 47595531 | 9401 | True | 583.775000 | 2039 | 91.980625 | 285 | 3584 | 8 | chr7A.!!$R2 | 3299 |
6 | TraesCS7D01G077200 | chrUn | 399199836 | 399201033 | 1197 | False | 1585.000000 | 1585 | 90.630000 | 1079 | 2274 | 1 | chrUn.!!$F1 | 1195 |
7 | TraesCS7D01G077200 | chrUn | 264364264 | 264366609 | 2345 | True | 1066.000000 | 2056 | 88.203000 | 285 | 3021 | 3 | chrUn.!!$R1 | 2736 |
8 | TraesCS7D01G077200 | chrUn | 370956465 | 370957728 | 1263 | False | 894.500000 | 1040 | 89.188000 | 285 | 1704 | 2 | chrUn.!!$F4 | 1419 |
9 | TraesCS7D01G077200 | chrUn | 317692232 | 317694600 | 2368 | False | 572.040000 | 2056 | 92.024800 | 1079 | 3584 | 5 | chrUn.!!$F2 | 2505 |
10 | TraesCS7D01G077200 | chrUn | 414618909 | 414620065 | 1156 | False | 254.640000 | 520 | 92.401600 | 2279 | 3584 | 5 | chrUn.!!$F5 | 1305 |
11 | TraesCS7D01G077200 | chrUn | 362060464 | 362061619 | 1155 | False | 251.040000 | 508 | 92.234600 | 2279 | 3584 | 5 | chrUn.!!$F3 | 1305 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
260 | 284 | 0.107848 | CCCCACCTTGTCCATCGTAC | 60.108 | 60.0 | 0.0 | 0.0 | 0.0 | 3.67 | F |
1029 | 7469 | 0.036388 | TGGAAACCCTCGATCTGCAC | 60.036 | 55.0 | 0.0 | 0.0 | 0.0 | 4.57 | F |
1030 | 7470 | 0.036388 | GGAAACCCTCGATCTGCACA | 60.036 | 55.0 | 0.0 | 0.0 | 0.0 | 4.57 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1404 | 8459 | 0.179045 | CGGAGGAACATAAGCCAGGG | 60.179 | 60.0 | 0.0 | 0.0 | 0.00 | 4.45 | R |
2334 | 9432 | 0.116342 | TCCCTGTTACCAGCTCCAGA | 59.884 | 55.0 | 0.0 | 0.0 | 37.38 | 3.86 | R |
2793 | 9891 | 0.320771 | AACAGGATCGACAGCCACAC | 60.321 | 55.0 | 0.0 | 0.0 | 0.00 | 3.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
133 | 156 | 5.008613 | TGCAGGAAACATAAGTTGACTTGTC | 59.991 | 40.000 | 6.64 | 0.00 | 38.17 | 3.18 |
136 | 159 | 7.119846 | GCAGGAAACATAAGTTGACTTGTCTAT | 59.880 | 37.037 | 6.64 | 0.00 | 38.17 | 1.98 |
179 | 202 | 3.582647 | TCTTCTTTCAGCTCCACCACATA | 59.417 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
182 | 205 | 5.692115 | TCTTTCAGCTCCACCACATATAA | 57.308 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
188 | 211 | 3.074538 | AGCTCCACCACATATAATTCCCC | 59.925 | 47.826 | 0.00 | 0.00 | 0.00 | 4.81 |
189 | 212 | 3.814316 | GCTCCACCACATATAATTCCCCC | 60.814 | 52.174 | 0.00 | 0.00 | 0.00 | 5.40 |
190 | 213 | 3.397618 | CTCCACCACATATAATTCCCCCA | 59.602 | 47.826 | 0.00 | 0.00 | 0.00 | 4.96 |
193 | 216 | 4.527816 | CCACCACATATAATTCCCCCATTG | 59.472 | 45.833 | 0.00 | 0.00 | 0.00 | 2.82 |
226 | 250 | 1.127567 | CCCCCATAAGCCCGAGATGA | 61.128 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
230 | 254 | 1.688735 | CCATAAGCCCGAGATGAGTGA | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
239 | 263 | 2.298446 | CCGAGATGAGTGACATGGCTAT | 59.702 | 50.000 | 0.00 | 0.00 | 39.56 | 2.97 |
252 | 276 | 0.623723 | TGGCTATTCCCCACCTTGTC | 59.376 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
257 | 281 | 0.255890 | ATTCCCCACCTTGTCCATCG | 59.744 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
260 | 284 | 0.107848 | CCCCACCTTGTCCATCGTAC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
275 | 299 | 1.523938 | GTACCATCCTCCGCAAGCC | 60.524 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
278 | 302 | 2.045045 | CATCCTCCGCAAGCCCAA | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 4.12 |
353 | 6793 | 1.139095 | CGCTCCTCGGGTACAACTC | 59.861 | 63.158 | 0.00 | 0.00 | 33.78 | 3.01 |
366 | 6806 | 3.307059 | GGTACAACTCTGAAGCCATGAGT | 60.307 | 47.826 | 0.00 | 0.00 | 42.12 | 3.41 |
369 | 6809 | 3.834813 | ACAACTCTGAAGCCATGAGTAGA | 59.165 | 43.478 | 0.00 | 0.00 | 39.78 | 2.59 |
426 | 6866 | 1.071471 | CTGGGGCAAACAGACGACT | 59.929 | 57.895 | 0.00 | 0.00 | 38.20 | 4.18 |
504 | 6944 | 0.739813 | CTCGGGAGGGCTTTGTTACG | 60.740 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
522 | 6962 | 6.094719 | TGTTACGCGTATTTCACTCAGTAAT | 58.905 | 36.000 | 21.30 | 0.00 | 0.00 | 1.89 |
577 | 7017 | 4.002906 | TGCTCGTTCAAGAACCTTACAT | 57.997 | 40.909 | 7.32 | 0.00 | 38.03 | 2.29 |
578 | 7018 | 4.385825 | TGCTCGTTCAAGAACCTTACATT | 58.614 | 39.130 | 7.32 | 0.00 | 38.03 | 2.71 |
580 | 7020 | 4.142881 | GCTCGTTCAAGAACCTTACATTCC | 60.143 | 45.833 | 7.32 | 0.00 | 38.03 | 3.01 |
593 | 7033 | 4.392138 | CCTTACATTCCTTGACCTTTCGTC | 59.608 | 45.833 | 0.00 | 0.00 | 42.33 | 4.20 |
600 | 7040 | 2.290641 | CCTTGACCTTTCGTCCAACAAG | 59.709 | 50.000 | 0.00 | 0.00 | 41.18 | 3.16 |
620 | 7060 | 4.846168 | AGATTCCAGGTTCTTTCCCTAC | 57.154 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
624 | 7064 | 1.338769 | CCAGGTTCTTTCCCTACGGTG | 60.339 | 57.143 | 0.00 | 0.00 | 0.00 | 4.94 |
642 | 7082 | 2.358898 | GGTGCTTTTCAGTTGCTCAAGA | 59.641 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
660 | 7100 | 5.827756 | TCAAGACTTGAGTATCTGGACCTA | 58.172 | 41.667 | 13.99 | 0.00 | 34.08 | 3.08 |
665 | 7105 | 7.072562 | AGACTTGAGTATCTGGACCTATCATT | 58.927 | 38.462 | 0.00 | 0.00 | 34.92 | 2.57 |
747 | 7187 | 6.424207 | CCTACCTTAACCTTGAATCGAATAGC | 59.576 | 42.308 | 0.00 | 0.00 | 0.00 | 2.97 |
778 | 7218 | 5.880332 | GGTAGTATTCCAAGTTCAATCTGCA | 59.120 | 40.000 | 0.00 | 0.00 | 0.00 | 4.41 |
786 | 7226 | 3.549299 | AGTTCAATCTGCAAGCTTTCG | 57.451 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
810 | 7250 | 6.107343 | GTCCCTACAAGTTCTGAAACTATCC | 58.893 | 44.000 | 0.00 | 0.00 | 45.07 | 2.59 |
849 | 7289 | 3.369147 | CACACAGAATCGATCCACAGTTC | 59.631 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
872 | 7312 | 6.059484 | TCGGAAATTTGACAAACCTAGAAGT | 58.941 | 36.000 | 1.94 | 0.00 | 0.00 | 3.01 |
928 | 7368 | 6.767902 | TGAAATTCCAGACACTATATCCAAGC | 59.232 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
929 | 7369 | 6.506538 | AATTCCAGACACTATATCCAAGCT | 57.493 | 37.500 | 0.00 | 0.00 | 0.00 | 3.74 |
930 | 7370 | 4.944619 | TCCAGACACTATATCCAAGCTG | 57.055 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
931 | 7371 | 4.546674 | TCCAGACACTATATCCAAGCTGA | 58.453 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
932 | 7372 | 4.962362 | TCCAGACACTATATCCAAGCTGAA | 59.038 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
933 | 7373 | 5.053145 | CCAGACACTATATCCAAGCTGAAC | 58.947 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
934 | 7374 | 5.053145 | CAGACACTATATCCAAGCTGAACC | 58.947 | 45.833 | 0.00 | 0.00 | 0.00 | 3.62 |
935 | 7375 | 4.051922 | GACACTATATCCAAGCTGAACCG | 58.948 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
936 | 7376 | 3.704566 | ACACTATATCCAAGCTGAACCGA | 59.295 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
937 | 7377 | 4.051922 | CACTATATCCAAGCTGAACCGAC | 58.948 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
938 | 7378 | 3.961408 | ACTATATCCAAGCTGAACCGACT | 59.039 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
939 | 7379 | 3.914426 | ATATCCAAGCTGAACCGACTT | 57.086 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
940 | 7380 | 5.597182 | ACTATATCCAAGCTGAACCGACTTA | 59.403 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
941 | 7381 | 2.743636 | TCCAAGCTGAACCGACTTAG | 57.256 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
942 | 7382 | 2.244695 | TCCAAGCTGAACCGACTTAGA | 58.755 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
943 | 7383 | 2.631062 | TCCAAGCTGAACCGACTTAGAA | 59.369 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
944 | 7384 | 3.260884 | TCCAAGCTGAACCGACTTAGAAT | 59.739 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
945 | 7385 | 3.619038 | CCAAGCTGAACCGACTTAGAATC | 59.381 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
946 | 7386 | 4.499183 | CAAGCTGAACCGACTTAGAATCT | 58.501 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
947 | 7387 | 4.810191 | AGCTGAACCGACTTAGAATCTT | 57.190 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
948 | 7388 | 5.916661 | AGCTGAACCGACTTAGAATCTTA | 57.083 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
949 | 7389 | 5.897050 | AGCTGAACCGACTTAGAATCTTAG | 58.103 | 41.667 | 0.00 | 0.00 | 0.00 | 2.18 |
950 | 7390 | 5.652891 | AGCTGAACCGACTTAGAATCTTAGA | 59.347 | 40.000 | 3.05 | 0.00 | 0.00 | 2.10 |
951 | 7391 | 6.322712 | AGCTGAACCGACTTAGAATCTTAGAT | 59.677 | 38.462 | 3.05 | 0.00 | 0.00 | 1.98 |
952 | 7392 | 6.981559 | GCTGAACCGACTTAGAATCTTAGATT | 59.018 | 38.462 | 7.23 | 7.23 | 0.00 | 2.40 |
953 | 7393 | 7.492994 | GCTGAACCGACTTAGAATCTTAGATTT | 59.507 | 37.037 | 8.99 | 2.55 | 0.00 | 2.17 |
954 | 7394 | 8.703604 | TGAACCGACTTAGAATCTTAGATTTG | 57.296 | 34.615 | 8.99 | 3.45 | 0.00 | 2.32 |
955 | 7395 | 8.311836 | TGAACCGACTTAGAATCTTAGATTTGT | 58.688 | 33.333 | 8.99 | 6.30 | 0.00 | 2.83 |
956 | 7396 | 8.705048 | AACCGACTTAGAATCTTAGATTTGTC | 57.295 | 34.615 | 8.99 | 12.75 | 0.00 | 3.18 |
957 | 7397 | 8.068892 | ACCGACTTAGAATCTTAGATTTGTCT | 57.931 | 34.615 | 8.99 | 4.70 | 0.00 | 3.41 |
958 | 7398 | 8.532819 | ACCGACTTAGAATCTTAGATTTGTCTT | 58.467 | 33.333 | 8.99 | 3.84 | 0.00 | 3.01 |
959 | 7399 | 8.812329 | CCGACTTAGAATCTTAGATTTGTCTTG | 58.188 | 37.037 | 8.99 | 2.36 | 0.00 | 3.02 |
960 | 7400 | 9.574458 | CGACTTAGAATCTTAGATTTGTCTTGA | 57.426 | 33.333 | 8.99 | 0.00 | 0.00 | 3.02 |
966 | 7406 | 9.342308 | AGAATCTTAGATTTGTCTTGAAACACA | 57.658 | 29.630 | 8.99 | 0.00 | 0.00 | 3.72 |
967 | 7407 | 9.387123 | GAATCTTAGATTTGTCTTGAAACACAC | 57.613 | 33.333 | 8.99 | 0.00 | 0.00 | 3.82 |
968 | 7408 | 8.682936 | ATCTTAGATTTGTCTTGAAACACACT | 57.317 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
969 | 7409 | 8.142994 | TCTTAGATTTGTCTTGAAACACACTC | 57.857 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
970 | 7410 | 7.768582 | TCTTAGATTTGTCTTGAAACACACTCA | 59.231 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
971 | 7411 | 6.369059 | AGATTTGTCTTGAAACACACTCAG | 57.631 | 37.500 | 0.00 | 0.00 | 0.00 | 3.35 |
972 | 7412 | 5.882557 | AGATTTGTCTTGAAACACACTCAGT | 59.117 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
983 | 7423 | 2.699954 | CACACTCAGTGGGACAATACC | 58.300 | 52.381 | 10.28 | 0.00 | 44.16 | 2.73 |
984 | 7424 | 2.303022 | CACACTCAGTGGGACAATACCT | 59.697 | 50.000 | 10.28 | 0.00 | 44.16 | 3.08 |
985 | 7425 | 3.513912 | CACACTCAGTGGGACAATACCTA | 59.486 | 47.826 | 10.28 | 0.00 | 44.16 | 3.08 |
986 | 7426 | 3.769844 | ACACTCAGTGGGACAATACCTAG | 59.230 | 47.826 | 10.28 | 0.00 | 44.16 | 3.02 |
987 | 7427 | 3.769844 | CACTCAGTGGGACAATACCTAGT | 59.230 | 47.826 | 0.00 | 0.00 | 44.16 | 2.57 |
988 | 7428 | 3.769844 | ACTCAGTGGGACAATACCTAGTG | 59.230 | 47.826 | 0.00 | 0.00 | 44.16 | 2.74 |
989 | 7429 | 3.104512 | TCAGTGGGACAATACCTAGTGG | 58.895 | 50.000 | 0.00 | 0.00 | 44.16 | 4.00 |
990 | 7430 | 2.170607 | CAGTGGGACAATACCTAGTGGG | 59.829 | 54.545 | 0.00 | 0.00 | 44.16 | 4.61 |
991 | 7431 | 2.045326 | AGTGGGACAATACCTAGTGGGA | 59.955 | 50.000 | 0.00 | 0.00 | 44.16 | 4.37 |
992 | 7432 | 3.046374 | GTGGGACAATACCTAGTGGGAT | 58.954 | 50.000 | 0.00 | 0.00 | 44.16 | 3.85 |
994 | 7434 | 4.079958 | GTGGGACAATACCTAGTGGGATTT | 60.080 | 45.833 | 0.00 | 0.00 | 44.28 | 2.17 |
995 | 7435 | 4.080015 | TGGGACAATACCTAGTGGGATTTG | 60.080 | 45.833 | 0.00 | 5.18 | 44.28 | 2.32 |
996 | 7436 | 4.461198 | GGACAATACCTAGTGGGATTTGG | 58.539 | 47.826 | 0.00 | 0.00 | 44.28 | 3.28 |
997 | 7437 | 4.165372 | GGACAATACCTAGTGGGATTTGGA | 59.835 | 45.833 | 0.00 | 0.00 | 44.28 | 3.53 |
998 | 7438 | 5.368989 | GACAATACCTAGTGGGATTTGGAG | 58.631 | 45.833 | 0.00 | 0.00 | 44.28 | 3.86 |
999 | 7439 | 5.036916 | ACAATACCTAGTGGGATTTGGAGA | 58.963 | 41.667 | 0.00 | 0.00 | 44.28 | 3.71 |
1000 | 7440 | 5.491078 | ACAATACCTAGTGGGATTTGGAGAA | 59.509 | 40.000 | 0.00 | 0.00 | 44.28 | 2.87 |
1001 | 7441 | 6.160459 | ACAATACCTAGTGGGATTTGGAGAAT | 59.840 | 38.462 | 0.00 | 0.00 | 44.28 | 2.40 |
1002 | 7442 | 4.510167 | ACCTAGTGGGATTTGGAGAATG | 57.490 | 45.455 | 0.00 | 0.00 | 38.76 | 2.67 |
1003 | 7443 | 3.217626 | CCTAGTGGGATTTGGAGAATGC | 58.782 | 50.000 | 0.00 | 0.00 | 37.23 | 3.56 |
1004 | 7444 | 2.905415 | AGTGGGATTTGGAGAATGCA | 57.095 | 45.000 | 0.00 | 0.00 | 30.91 | 3.96 |
1005 | 7445 | 2.731572 | AGTGGGATTTGGAGAATGCAG | 58.268 | 47.619 | 0.00 | 0.00 | 38.09 | 4.41 |
1006 | 7446 | 2.309755 | AGTGGGATTTGGAGAATGCAGA | 59.690 | 45.455 | 0.00 | 0.00 | 38.09 | 4.26 |
1007 | 7447 | 3.091545 | GTGGGATTTGGAGAATGCAGAA | 58.908 | 45.455 | 0.00 | 0.00 | 38.09 | 3.02 |
1008 | 7448 | 3.703052 | GTGGGATTTGGAGAATGCAGAAT | 59.297 | 43.478 | 0.00 | 0.00 | 38.09 | 2.40 |
1009 | 7449 | 4.889409 | GTGGGATTTGGAGAATGCAGAATA | 59.111 | 41.667 | 0.00 | 0.00 | 38.09 | 1.75 |
1010 | 7450 | 5.537674 | GTGGGATTTGGAGAATGCAGAATAT | 59.462 | 40.000 | 0.00 | 0.00 | 38.09 | 1.28 |
1011 | 7451 | 5.537295 | TGGGATTTGGAGAATGCAGAATATG | 59.463 | 40.000 | 0.00 | 0.00 | 38.09 | 1.78 |
1012 | 7452 | 5.047519 | GGGATTTGGAGAATGCAGAATATGG | 60.048 | 44.000 | 0.00 | 0.00 | 38.09 | 2.74 |
1013 | 7453 | 5.771666 | GGATTTGGAGAATGCAGAATATGGA | 59.228 | 40.000 | 0.00 | 0.00 | 38.09 | 3.41 |
1014 | 7454 | 6.266103 | GGATTTGGAGAATGCAGAATATGGAA | 59.734 | 38.462 | 0.00 | 0.00 | 38.09 | 3.53 |
1015 | 7455 | 7.201938 | GGATTTGGAGAATGCAGAATATGGAAA | 60.202 | 37.037 | 0.00 | 0.00 | 38.09 | 3.13 |
1016 | 7456 | 6.455360 | TTGGAGAATGCAGAATATGGAAAC | 57.545 | 37.500 | 0.00 | 0.00 | 38.09 | 2.78 |
1017 | 7457 | 4.889409 | TGGAGAATGCAGAATATGGAAACC | 59.111 | 41.667 | 0.00 | 0.00 | 30.55 | 3.27 |
1018 | 7458 | 4.279420 | GGAGAATGCAGAATATGGAAACCC | 59.721 | 45.833 | 0.00 | 0.00 | 30.55 | 4.11 |
1019 | 7459 | 5.134725 | AGAATGCAGAATATGGAAACCCT | 57.865 | 39.130 | 0.00 | 0.00 | 30.55 | 4.34 |
1020 | 7460 | 5.136105 | AGAATGCAGAATATGGAAACCCTC | 58.864 | 41.667 | 0.00 | 0.00 | 30.55 | 4.30 |
1021 | 7461 | 2.917933 | TGCAGAATATGGAAACCCTCG | 58.082 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
1022 | 7462 | 2.503765 | TGCAGAATATGGAAACCCTCGA | 59.496 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
1023 | 7463 | 3.136443 | TGCAGAATATGGAAACCCTCGAT | 59.864 | 43.478 | 0.00 | 0.00 | 0.00 | 3.59 |
1024 | 7464 | 3.748568 | GCAGAATATGGAAACCCTCGATC | 59.251 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
1025 | 7465 | 4.503991 | GCAGAATATGGAAACCCTCGATCT | 60.504 | 45.833 | 0.00 | 0.00 | 0.00 | 2.75 |
1026 | 7466 | 4.993584 | CAGAATATGGAAACCCTCGATCTG | 59.006 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
1027 | 7467 | 2.910688 | TATGGAAACCCTCGATCTGC | 57.089 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1028 | 7468 | 0.911769 | ATGGAAACCCTCGATCTGCA | 59.088 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1029 | 7469 | 0.036388 | TGGAAACCCTCGATCTGCAC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1030 | 7470 | 0.036388 | GGAAACCCTCGATCTGCACA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1031 | 7471 | 1.363744 | GAAACCCTCGATCTGCACAG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1032 | 7472 | 0.687354 | AAACCCTCGATCTGCACAGT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1033 | 7473 | 1.557099 | AACCCTCGATCTGCACAGTA | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1034 | 7474 | 1.557099 | ACCCTCGATCTGCACAGTAA | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1035 | 7475 | 1.204941 | ACCCTCGATCTGCACAGTAAC | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 2.50 |
1036 | 7476 | 1.478510 | CCCTCGATCTGCACAGTAACT | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
1037 | 7477 | 2.480416 | CCCTCGATCTGCACAGTAACTC | 60.480 | 54.545 | 0.00 | 0.00 | 0.00 | 3.01 |
1038 | 7478 | 2.425312 | CCTCGATCTGCACAGTAACTCT | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1039 | 7479 | 3.488384 | CCTCGATCTGCACAGTAACTCTC | 60.488 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
1040 | 7480 | 3.348119 | TCGATCTGCACAGTAACTCTCT | 58.652 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
1041 | 7481 | 4.514401 | TCGATCTGCACAGTAACTCTCTA | 58.486 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
1042 | 7482 | 5.126779 | TCGATCTGCACAGTAACTCTCTAT | 58.873 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
1043 | 7483 | 5.237561 | TCGATCTGCACAGTAACTCTCTATC | 59.762 | 44.000 | 0.00 | 0.00 | 0.00 | 2.08 |
1044 | 7484 | 5.238432 | CGATCTGCACAGTAACTCTCTATCT | 59.762 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1045 | 7485 | 5.826601 | TCTGCACAGTAACTCTCTATCTG | 57.173 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
1046 | 7486 | 4.642437 | TCTGCACAGTAACTCTCTATCTGG | 59.358 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
1047 | 7487 | 4.344978 | TGCACAGTAACTCTCTATCTGGT | 58.655 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1048 | 7488 | 4.399618 | TGCACAGTAACTCTCTATCTGGTC | 59.600 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
1049 | 7489 | 4.496673 | GCACAGTAACTCTCTATCTGGTCG | 60.497 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1050 | 7490 | 3.628487 | ACAGTAACTCTCTATCTGGTCGC | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
1051 | 7491 | 3.628032 | CAGTAACTCTCTATCTGGTCGCA | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 5.10 |
1052 | 7492 | 4.277174 | CAGTAACTCTCTATCTGGTCGCAT | 59.723 | 45.833 | 0.00 | 0.00 | 0.00 | 4.73 |
1053 | 7493 | 5.470437 | CAGTAACTCTCTATCTGGTCGCATA | 59.530 | 44.000 | 0.00 | 0.00 | 0.00 | 3.14 |
1054 | 7494 | 4.839668 | AACTCTCTATCTGGTCGCATAC | 57.160 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
1065 | 7505 | 2.086054 | GTCGCATACCAGATGATCCC | 57.914 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1066 | 7506 | 0.976641 | TCGCATACCAGATGATCCCC | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1067 | 7507 | 0.390340 | CGCATACCAGATGATCCCCG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
1068 | 7508 | 0.687354 | GCATACCAGATGATCCCCGT | 59.313 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1069 | 7509 | 1.899814 | GCATACCAGATGATCCCCGTA | 59.100 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1070 | 7510 | 2.301870 | GCATACCAGATGATCCCCGTAA | 59.698 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1071 | 7511 | 3.617531 | GCATACCAGATGATCCCCGTAAG | 60.618 | 52.174 | 0.00 | 0.00 | 0.00 | 2.34 |
1072 | 7512 | 0.759346 | ACCAGATGATCCCCGTAAGC | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
1073 | 7513 | 1.051812 | CCAGATGATCCCCGTAAGCT | 58.948 | 55.000 | 0.00 | 0.00 | 0.00 | 3.74 |
1074 | 7514 | 1.001406 | CCAGATGATCCCCGTAAGCTC | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 4.09 |
1075 | 7515 | 1.688735 | CAGATGATCCCCGTAAGCTCA | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
1076 | 7516 | 2.103094 | CAGATGATCCCCGTAAGCTCAA | 59.897 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1077 | 7517 | 2.366916 | AGATGATCCCCGTAAGCTCAAG | 59.633 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1080 | 7520 | 2.771943 | TGATCCCCGTAAGCTCAAGAAT | 59.228 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
1084 | 7524 | 2.093447 | CCCCGTAAGCTCAAGAATCTGT | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1087 | 7527 | 3.368427 | CCGTAAGCTCAAGAATCTGTCCA | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
1104 | 7544 | 9.660180 | AATCTGTCCAAACTTAGAATCTTAGAC | 57.340 | 33.333 | 3.05 | 0.00 | 0.00 | 2.59 |
1120 | 7560 | 9.477484 | GAATCTTAGACTTGTCTTCTAACACAA | 57.523 | 33.333 | 8.66 | 0.00 | 33.08 | 3.33 |
1239 | 8291 | 5.728637 | TCTGTAAGCTCAAGAATCTGTCA | 57.271 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
1257 | 8309 | 5.471797 | TCTGTCATGGCTTTTATTGAACGAA | 59.528 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1276 | 8328 | 4.141390 | ACGAAAATCTTCTATCTGGCCCAT | 60.141 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1298 | 8350 | 5.971895 | TTACCAGAAAACGTTACACAGTC | 57.028 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
1319 | 8374 | 5.014123 | AGTCACAATTAACCTCCATCTTCCA | 59.986 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1320 | 8375 | 5.710099 | GTCACAATTAACCTCCATCTTCCAA | 59.290 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1321 | 8376 | 5.710099 | TCACAATTAACCTCCATCTTCCAAC | 59.290 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1404 | 8459 | 3.573967 | TCCAATGGAGCTTTCTTTCCAAC | 59.426 | 43.478 | 0.00 | 0.00 | 45.94 | 3.77 |
1407 | 8462 | 1.499007 | TGGAGCTTTCTTTCCAACCCT | 59.501 | 47.619 | 0.00 | 0.00 | 40.41 | 4.34 |
1423 | 8478 | 0.179045 | CCCTGGCTTATGTTCCTCCG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1434 | 8489 | 1.072505 | TTCCTCCGACCACTTTGGC | 59.927 | 57.895 | 0.00 | 0.00 | 42.67 | 4.52 |
1445 | 8500 | 2.110011 | ACCACTTTGGCAACCTTCCTAT | 59.890 | 45.455 | 0.00 | 0.00 | 42.67 | 2.57 |
1450 | 8505 | 0.323360 | TGGCAACCTTCCTATGTGCC | 60.323 | 55.000 | 6.04 | 6.04 | 40.97 | 5.01 |
1486 | 8541 | 9.512588 | ACTTGAAGATGTTTGTAATCATTCTCT | 57.487 | 29.630 | 0.00 | 0.00 | 0.00 | 3.10 |
1491 | 8546 | 8.641498 | AGATGTTTGTAATCATTCTCTTGGTT | 57.359 | 30.769 | 0.00 | 0.00 | 0.00 | 3.67 |
1545 | 8600 | 7.093945 | GGGCTGATTGGTTTAACTAAGATCAAA | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
1553 | 8608 | 9.691362 | TGGTTTAACTAAGATCAAAGCATTTTC | 57.309 | 29.630 | 0.00 | 0.00 | 35.03 | 2.29 |
1561 | 8616 | 5.476614 | AGATCAAAGCATTTTCCTCAAAGC | 58.523 | 37.500 | 0.00 | 0.00 | 35.03 | 3.51 |
1568 | 8623 | 3.058708 | GCATTTTCCTCAAAGCAAAAGGC | 60.059 | 43.478 | 0.00 | 0.00 | 38.96 | 4.35 |
2070 | 9128 | 0.318441 | CACACCGTGATGTGGAGTCT | 59.682 | 55.000 | 5.28 | 0.00 | 45.21 | 3.24 |
2100 | 9158 | 4.026744 | TCCTACTGGATCCTCAGTTCAAG | 58.973 | 47.826 | 14.23 | 3.68 | 44.74 | 3.02 |
2103 | 9161 | 0.250234 | TGGATCCTCAGTTCAAGGCG | 59.750 | 55.000 | 14.23 | 0.00 | 33.65 | 5.52 |
2121 | 9179 | 1.156736 | CGAAGATTGCGGACTTTGGT | 58.843 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2241 | 9333 | 8.728088 | ATTTTGAACTCTGTATTTTAACTGCG | 57.272 | 30.769 | 0.00 | 0.00 | 0.00 | 5.18 |
2242 | 9334 | 6.854496 | TTGAACTCTGTATTTTAACTGCGT | 57.146 | 33.333 | 0.00 | 0.00 | 0.00 | 5.24 |
2243 | 9335 | 6.223138 | TGAACTCTGTATTTTAACTGCGTG | 57.777 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
2245 | 9337 | 6.480651 | TGAACTCTGTATTTTAACTGCGTGAA | 59.519 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2246 | 9338 | 6.224420 | ACTCTGTATTTTAACTGCGTGAAC | 57.776 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
2247 | 9339 | 5.756347 | ACTCTGTATTTTAACTGCGTGAACA | 59.244 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2248 | 9340 | 6.259167 | ACTCTGTATTTTAACTGCGTGAACAA | 59.741 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
2249 | 9341 | 6.423862 | TCTGTATTTTAACTGCGTGAACAAC | 58.576 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2250 | 9342 | 6.259167 | TCTGTATTTTAACTGCGTGAACAACT | 59.741 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2251 | 9343 | 7.438757 | TCTGTATTTTAACTGCGTGAACAACTA | 59.561 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2252 | 9344 | 7.346695 | TGTATTTTAACTGCGTGAACAACTAC | 58.653 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
2253 | 9345 | 6.613755 | ATTTTAACTGCGTGAACAACTACT | 57.386 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2254 | 9346 | 6.425577 | TTTTAACTGCGTGAACAACTACTT | 57.574 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2255 | 9347 | 7.536895 | TTTTAACTGCGTGAACAACTACTTA | 57.463 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2256 | 9348 | 6.515043 | TTAACTGCGTGAACAACTACTTAC | 57.485 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
2260 | 9358 | 3.125316 | GCGTGAACAACTACTTACACCA | 58.875 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
2264 | 9362 | 6.133392 | CGTGAACAACTACTTACACCATTTG | 58.867 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2269 | 9367 | 8.696410 | AACAACTACTTACACCATTTGTTTTG | 57.304 | 30.769 | 0.00 | 0.00 | 39.91 | 2.44 |
2274 | 9372 | 9.398538 | ACTACTTACACCATTTGTTTTGTAGAA | 57.601 | 29.630 | 0.00 | 0.00 | 39.91 | 2.10 |
2334 | 9432 | 0.261696 | ACAGCTTTGGGGTGGTTCTT | 59.738 | 50.000 | 0.00 | 0.00 | 46.60 | 2.52 |
2424 | 9522 | 5.205821 | TGGAGGCAATTTCATCAAGATGAT | 58.794 | 37.500 | 13.06 | 0.00 | 46.12 | 2.45 |
2460 | 9558 | 7.926674 | TTTGACAAATCTGATAGATGCAGAA | 57.073 | 32.000 | 0.00 | 0.00 | 44.71 | 3.02 |
2652 | 9750 | 6.142817 | CCAGAAGGTCGTCAAAATTTACAAG | 58.857 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2658 | 9756 | 5.371629 | GTCGTCAAAATTTACAAGGAGACG | 58.628 | 41.667 | 0.00 | 0.00 | 46.18 | 4.18 |
2660 | 9758 | 4.319190 | CGTCAAAATTTACAAGGAGACGCA | 60.319 | 41.667 | 0.00 | 0.00 | 40.60 | 5.24 |
2666 | 9764 | 1.037493 | TACAAGGAGACGCACACTGT | 58.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2678 | 9776 | 4.382291 | ACGCACACTGTGGTTTTATTCTA | 58.618 | 39.130 | 13.09 | 0.00 | 33.64 | 2.10 |
2686 | 9784 | 9.841295 | ACACTGTGGTTTTATTCTAACTAAAGA | 57.159 | 29.630 | 13.09 | 0.00 | 29.04 | 2.52 |
2715 | 9813 | 5.141182 | TGTCCAAATAAAACTGTAAGGGCA | 58.859 | 37.500 | 0.00 | 0.00 | 39.30 | 5.36 |
2720 | 9818 | 4.759516 | ATAAAACTGTAAGGGCAACACG | 57.240 | 40.909 | 0.00 | 0.00 | 39.30 | 4.49 |
2803 | 9901 | 0.039798 | CAGCATGTTGTGTGGCTGTC | 60.040 | 55.000 | 0.65 | 0.00 | 46.47 | 3.51 |
2810 | 9908 | 0.320683 | TTGTGTGGCTGTCGATCCTG | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2818 | 9916 | 3.512329 | TGGCTGTCGATCCTGTTTACTTA | 59.488 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
2853 | 9953 | 4.564041 | AGTCAAGCACTGAACAGAGTATG | 58.436 | 43.478 | 8.87 | 4.88 | 35.22 | 2.39 |
2856 | 9956 | 2.260822 | AGCACTGAACAGAGTATGGGT | 58.739 | 47.619 | 8.87 | 0.00 | 0.00 | 4.51 |
2864 | 9964 | 7.987458 | CACTGAACAGAGTATGGGTATAAACAT | 59.013 | 37.037 | 8.87 | 0.00 | 0.00 | 2.71 |
2941 | 10070 | 2.354510 | CGCCAAAAGTTTCAGAGACACA | 59.645 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
2942 | 10071 | 3.546815 | CGCCAAAAGTTTCAGAGACACAG | 60.547 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
2962 | 10091 | 5.376947 | CAGCGTGCTGTTATTCTTACTAC | 57.623 | 43.478 | 13.62 | 0.00 | 39.10 | 2.73 |
2963 | 10092 | 5.103000 | CAGCGTGCTGTTATTCTTACTACT | 58.897 | 41.667 | 13.62 | 0.00 | 39.10 | 2.57 |
2964 | 10093 | 6.263344 | CAGCGTGCTGTTATTCTTACTACTA | 58.737 | 40.000 | 13.62 | 0.00 | 39.10 | 1.82 |
2965 | 10094 | 6.415280 | CAGCGTGCTGTTATTCTTACTACTAG | 59.585 | 42.308 | 13.62 | 0.00 | 39.10 | 2.57 |
2966 | 10095 | 6.318144 | AGCGTGCTGTTATTCTTACTACTAGA | 59.682 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
2967 | 10096 | 7.013464 | AGCGTGCTGTTATTCTTACTACTAGAT | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2968 | 10097 | 8.288208 | GCGTGCTGTTATTCTTACTACTAGATA | 58.712 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2969 | 10098 | 9.814507 | CGTGCTGTTATTCTTACTACTAGATAG | 57.185 | 37.037 | 0.00 | 0.00 | 36.89 | 2.08 |
3028 | 10185 | 6.366877 | ACACACGCAGTAGTTTTTATTACGAT | 59.633 | 34.615 | 0.00 | 0.00 | 41.61 | 3.73 |
3029 | 10186 | 6.676995 | CACACGCAGTAGTTTTTATTACGATG | 59.323 | 38.462 | 0.00 | 0.00 | 41.61 | 3.84 |
3062 | 10249 | 2.637521 | CAGCATGTTGTCTGGCTGT | 58.362 | 52.632 | 0.65 | 0.00 | 46.47 | 4.40 |
3074 | 10261 | 2.497675 | GTCTGGCTGTCTGTTGATCCTA | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
3125 | 10312 | 8.687242 | TCAAGGACTAAACAGAGTATCAGTATG | 58.313 | 37.037 | 0.00 | 0.00 | 31.77 | 2.39 |
3199 | 10469 | 7.543520 | GGGAATTCATTCATTCTGAACTTTGTC | 59.456 | 37.037 | 7.93 | 0.00 | 39.45 | 3.18 |
3204 | 10474 | 6.772233 | TCATTCATTCTGAACTTTGTCTTGGA | 59.228 | 34.615 | 0.00 | 0.00 | 39.45 | 3.53 |
3226 | 10496 | 5.932303 | GGATGCTGTTACTTTCTGTAGACAA | 59.068 | 40.000 | 0.00 | 0.00 | 32.08 | 3.18 |
3230 | 10502 | 8.220755 | TGCTGTTACTTTCTGTAGACAAAAAT | 57.779 | 30.769 | 0.00 | 0.00 | 32.08 | 1.82 |
3243 | 10515 | 9.450807 | CTGTAGACAAAAATAAAAAGGTGTCTG | 57.549 | 33.333 | 13.01 | 0.00 | 44.01 | 3.51 |
3246 | 10518 | 8.062065 | AGACAAAAATAAAAAGGTGTCTGTCA | 57.938 | 30.769 | 3.46 | 0.00 | 42.98 | 3.58 |
3248 | 10520 | 8.062065 | ACAAAAATAAAAAGGTGTCTGTCAGA | 57.938 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
3249 | 10521 | 8.527810 | ACAAAAATAAAAAGGTGTCTGTCAGAA | 58.472 | 29.630 | 3.51 | 0.00 | 0.00 | 3.02 |
3251 | 10523 | 9.750125 | AAAAATAAAAAGGTGTCTGTCAGAATC | 57.250 | 29.630 | 3.51 | 0.68 | 0.00 | 2.52 |
3285 | 10557 | 5.309282 | AGTCTTCCTTCAAACCTCAGAGATT | 59.691 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3308 | 10580 | 2.504367 | ACACAAGTGTTGGTAGATGCC | 58.496 | 47.619 | 0.00 | 0.00 | 41.83 | 4.40 |
3341 | 10613 | 9.844790 | TGCTGACACAATATAAATCTTCAAAAG | 57.155 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
3452 | 10734 | 2.507484 | TGGTTTGTTCAGCAGAGATGG | 58.493 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
3519 | 10801 | 8.027524 | TCAAGAGATATCTTCCTGCTTAACAT | 57.972 | 34.615 | 6.70 | 0.00 | 0.00 | 2.71 |
3522 | 10804 | 7.441017 | AGAGATATCTTCCTGCTTAACATCAC | 58.559 | 38.462 | 6.70 | 0.00 | 0.00 | 3.06 |
3544 | 10826 | 4.038763 | ACAGGATATTTCACGGAGCGATTA | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
3564 | 10846 | 1.722011 | TGTCGATTCCTCGCCTTTTC | 58.278 | 50.000 | 0.00 | 0.00 | 44.65 | 2.29 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
58 | 59 | 4.503991 | CCTTCTATGACTAGTGGCCATTCC | 60.504 | 50.000 | 9.72 | 0.00 | 0.00 | 3.01 |
70 | 71 | 5.485708 | AGAAGTTAGGTTGCCTTCTATGACT | 59.514 | 40.000 | 0.00 | 0.00 | 42.25 | 3.41 |
75 | 76 | 6.435292 | AAGAAGAAGTTAGGTTGCCTTCTA | 57.565 | 37.500 | 0.00 | 0.00 | 43.01 | 2.10 |
110 | 133 | 5.239525 | AGACAAGTCAACTTATGTTTCCTGC | 59.760 | 40.000 | 2.72 | 0.00 | 34.28 | 4.85 |
117 | 140 | 9.244292 | TCTACTGATAGACAAGTCAACTTATGT | 57.756 | 33.333 | 2.72 | 0.00 | 32.16 | 2.29 |
133 | 156 | 6.071984 | ACCCATAGTCAAGGTCTACTGATAG | 58.928 | 44.000 | 0.00 | 0.00 | 0.00 | 2.08 |
136 | 159 | 4.279145 | GACCCATAGTCAAGGTCTACTGA | 58.721 | 47.826 | 1.17 | 0.00 | 45.49 | 3.41 |
147 | 170 | 3.840666 | AGCTGAAAGAAGACCCATAGTCA | 59.159 | 43.478 | 0.00 | 0.00 | 42.59 | 3.41 |
152 | 175 | 1.988107 | TGGAGCTGAAAGAAGACCCAT | 59.012 | 47.619 | 0.00 | 0.00 | 34.07 | 4.00 |
153 | 176 | 1.072331 | GTGGAGCTGAAAGAAGACCCA | 59.928 | 52.381 | 0.00 | 0.00 | 34.07 | 4.51 |
179 | 202 | 7.788867 | TGTTATGATGAACAATGGGGGAATTAT | 59.211 | 33.333 | 0.00 | 0.00 | 36.39 | 1.28 |
182 | 205 | 5.527385 | TGTTATGATGAACAATGGGGGAAT | 58.473 | 37.500 | 0.00 | 0.00 | 36.39 | 3.01 |
188 | 211 | 4.281688 | GGGGGATGTTATGATGAACAATGG | 59.718 | 45.833 | 0.00 | 0.00 | 42.39 | 3.16 |
189 | 212 | 4.894705 | TGGGGGATGTTATGATGAACAATG | 59.105 | 41.667 | 0.00 | 0.00 | 42.39 | 2.82 |
190 | 213 | 5.141455 | TGGGGGATGTTATGATGAACAAT | 57.859 | 39.130 | 0.00 | 0.00 | 42.39 | 2.71 |
193 | 216 | 5.183904 | GCTTATGGGGGATGTTATGATGAAC | 59.816 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
226 | 250 | 1.212935 | GTGGGGAATAGCCATGTCACT | 59.787 | 52.381 | 0.00 | 0.00 | 38.95 | 3.41 |
230 | 254 | 1.063717 | CAAGGTGGGGAATAGCCATGT | 60.064 | 52.381 | 0.00 | 0.00 | 38.95 | 3.21 |
239 | 263 | 1.131303 | ACGATGGACAAGGTGGGGAA | 61.131 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
252 | 276 | 1.006102 | GCGGAGGATGGTACGATGG | 60.006 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
257 | 281 | 1.523938 | GGCTTGCGGAGGATGGTAC | 60.524 | 63.158 | 0.00 | 0.00 | 0.00 | 3.34 |
260 | 284 | 3.643595 | TTGGGCTTGCGGAGGATGG | 62.644 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
275 | 299 | 6.513806 | TGGTATTGTGAACAATCATCTTGG | 57.486 | 37.500 | 11.80 | 0.00 | 44.67 | 3.61 |
278 | 302 | 6.666678 | AGGATGGTATTGTGAACAATCATCT | 58.333 | 36.000 | 23.38 | 14.26 | 44.67 | 2.90 |
353 | 6793 | 2.941720 | GCCTTTCTACTCATGGCTTCAG | 59.058 | 50.000 | 0.00 | 0.00 | 40.36 | 3.02 |
366 | 6806 | 3.821033 | GTGCTTCCTTTTCAGCCTTTCTA | 59.179 | 43.478 | 0.00 | 0.00 | 34.91 | 2.10 |
369 | 6809 | 2.670939 | AGTGCTTCCTTTTCAGCCTTT | 58.329 | 42.857 | 0.00 | 0.00 | 34.91 | 3.11 |
504 | 6944 | 8.818057 | AGATTGTAATTACTGAGTGAAATACGC | 58.182 | 33.333 | 16.33 | 0.00 | 0.00 | 4.42 |
532 | 6972 | 0.690192 | TCTGACGGAATTGGCTTGGA | 59.310 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
593 | 7033 | 4.021981 | GGAAAGAACCTGGAATCTTGTTGG | 60.022 | 45.833 | 16.31 | 0.00 | 36.09 | 3.77 |
600 | 7040 | 3.532542 | CGTAGGGAAAGAACCTGGAATC | 58.467 | 50.000 | 0.00 | 0.00 | 39.12 | 2.52 |
620 | 7060 | 0.662619 | TGAGCAACTGAAAAGCACCG | 59.337 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
624 | 7064 | 3.978718 | AGTCTTGAGCAACTGAAAAGC | 57.021 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
642 | 7082 | 6.841229 | TGAATGATAGGTCCAGATACTCAAGT | 59.159 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
660 | 7100 | 9.082313 | AGACTACCAACAAAAGAATTGAATGAT | 57.918 | 29.630 | 0.00 | 0.00 | 0.00 | 2.45 |
665 | 7105 | 5.768164 | GGGAGACTACCAACAAAAGAATTGA | 59.232 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
747 | 7187 | 6.812998 | TGAACTTGGAATACTACCGGATAAG | 58.187 | 40.000 | 9.46 | 4.91 | 0.00 | 1.73 |
778 | 7218 | 3.071167 | AGAACTTGTAGGGACGAAAGCTT | 59.929 | 43.478 | 0.00 | 0.00 | 0.00 | 3.74 |
786 | 7226 | 6.070710 | AGGATAGTTTCAGAACTTGTAGGGAC | 60.071 | 42.308 | 0.00 | 0.00 | 43.48 | 4.46 |
810 | 7250 | 2.229784 | GTGTGAAGCAAAGGGATTGGAG | 59.770 | 50.000 | 0.00 | 0.00 | 39.54 | 3.86 |
849 | 7289 | 6.313744 | ACTTCTAGGTTTGTCAAATTTCCG | 57.686 | 37.500 | 0.40 | 0.00 | 0.00 | 4.30 |
928 | 7368 | 8.812329 | CAAATCTAAGATTCTAAGTCGGTTCAG | 58.188 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
929 | 7369 | 8.311836 | ACAAATCTAAGATTCTAAGTCGGTTCA | 58.688 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
930 | 7370 | 8.705048 | ACAAATCTAAGATTCTAAGTCGGTTC | 57.295 | 34.615 | 0.00 | 0.00 | 0.00 | 3.62 |
931 | 7371 | 8.532819 | AGACAAATCTAAGATTCTAAGTCGGTT | 58.467 | 33.333 | 0.00 | 0.00 | 31.46 | 4.44 |
932 | 7372 | 8.068892 | AGACAAATCTAAGATTCTAAGTCGGT | 57.931 | 34.615 | 0.00 | 0.00 | 31.46 | 4.69 |
933 | 7373 | 8.812329 | CAAGACAAATCTAAGATTCTAAGTCGG | 58.188 | 37.037 | 0.00 | 0.00 | 33.57 | 4.79 |
934 | 7374 | 9.574458 | TCAAGACAAATCTAAGATTCTAAGTCG | 57.426 | 33.333 | 0.00 | 0.00 | 33.57 | 4.18 |
940 | 7380 | 9.342308 | TGTGTTTCAAGACAAATCTAAGATTCT | 57.658 | 29.630 | 0.00 | 0.00 | 33.57 | 2.40 |
941 | 7381 | 9.387123 | GTGTGTTTCAAGACAAATCTAAGATTC | 57.613 | 33.333 | 0.00 | 0.00 | 33.72 | 2.52 |
942 | 7382 | 9.125026 | AGTGTGTTTCAAGACAAATCTAAGATT | 57.875 | 29.630 | 0.00 | 0.00 | 33.72 | 2.40 |
943 | 7383 | 8.682936 | AGTGTGTTTCAAGACAAATCTAAGAT | 57.317 | 30.769 | 0.00 | 0.00 | 33.72 | 2.40 |
944 | 7384 | 7.768582 | TGAGTGTGTTTCAAGACAAATCTAAGA | 59.231 | 33.333 | 0.00 | 0.00 | 33.72 | 2.10 |
945 | 7385 | 7.919690 | TGAGTGTGTTTCAAGACAAATCTAAG | 58.080 | 34.615 | 0.00 | 0.00 | 33.72 | 2.18 |
946 | 7386 | 7.552687 | ACTGAGTGTGTTTCAAGACAAATCTAA | 59.447 | 33.333 | 0.00 | 0.00 | 33.72 | 2.10 |
947 | 7387 | 7.011389 | CACTGAGTGTGTTTCAAGACAAATCTA | 59.989 | 37.037 | 4.01 | 0.00 | 41.53 | 1.98 |
948 | 7388 | 5.882557 | ACTGAGTGTGTTTCAAGACAAATCT | 59.117 | 36.000 | 0.00 | 0.00 | 33.72 | 2.40 |
949 | 7389 | 5.967674 | CACTGAGTGTGTTTCAAGACAAATC | 59.032 | 40.000 | 4.01 | 0.00 | 41.53 | 2.17 |
950 | 7390 | 5.163622 | CCACTGAGTGTGTTTCAAGACAAAT | 60.164 | 40.000 | 12.15 | 0.00 | 44.81 | 2.32 |
951 | 7391 | 4.155826 | CCACTGAGTGTGTTTCAAGACAAA | 59.844 | 41.667 | 12.15 | 0.00 | 44.81 | 2.83 |
952 | 7392 | 3.689161 | CCACTGAGTGTGTTTCAAGACAA | 59.311 | 43.478 | 12.15 | 0.00 | 44.81 | 3.18 |
953 | 7393 | 3.270027 | CCACTGAGTGTGTTTCAAGACA | 58.730 | 45.455 | 12.15 | 0.00 | 44.81 | 3.41 |
954 | 7394 | 2.614057 | CCCACTGAGTGTGTTTCAAGAC | 59.386 | 50.000 | 12.15 | 0.00 | 44.81 | 3.01 |
955 | 7395 | 2.503765 | TCCCACTGAGTGTGTTTCAAGA | 59.496 | 45.455 | 12.15 | 0.00 | 44.81 | 3.02 |
956 | 7396 | 2.614057 | GTCCCACTGAGTGTGTTTCAAG | 59.386 | 50.000 | 12.15 | 0.00 | 44.81 | 3.02 |
957 | 7397 | 2.026729 | TGTCCCACTGAGTGTGTTTCAA | 60.027 | 45.455 | 12.15 | 0.00 | 44.81 | 2.69 |
958 | 7398 | 1.557371 | TGTCCCACTGAGTGTGTTTCA | 59.443 | 47.619 | 12.15 | 1.05 | 44.81 | 2.69 |
959 | 7399 | 2.325583 | TGTCCCACTGAGTGTGTTTC | 57.674 | 50.000 | 12.15 | 0.00 | 44.81 | 2.78 |
960 | 7400 | 2.799126 | TTGTCCCACTGAGTGTGTTT | 57.201 | 45.000 | 12.15 | 0.00 | 44.81 | 2.83 |
961 | 7401 | 3.496160 | GGTATTGTCCCACTGAGTGTGTT | 60.496 | 47.826 | 12.15 | 0.00 | 44.81 | 3.32 |
962 | 7402 | 2.038557 | GGTATTGTCCCACTGAGTGTGT | 59.961 | 50.000 | 12.15 | 0.00 | 44.81 | 3.72 |
963 | 7403 | 2.303022 | AGGTATTGTCCCACTGAGTGTG | 59.697 | 50.000 | 12.15 | 0.00 | 45.80 | 3.82 |
964 | 7404 | 2.621070 | AGGTATTGTCCCACTGAGTGT | 58.379 | 47.619 | 12.15 | 0.00 | 0.00 | 3.55 |
965 | 7405 | 3.769844 | ACTAGGTATTGTCCCACTGAGTG | 59.230 | 47.826 | 5.42 | 5.42 | 0.00 | 3.51 |
966 | 7406 | 3.769844 | CACTAGGTATTGTCCCACTGAGT | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
967 | 7407 | 3.133003 | CCACTAGGTATTGTCCCACTGAG | 59.867 | 52.174 | 0.00 | 0.00 | 0.00 | 3.35 |
968 | 7408 | 3.104512 | CCACTAGGTATTGTCCCACTGA | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
969 | 7409 | 2.170607 | CCCACTAGGTATTGTCCCACTG | 59.829 | 54.545 | 0.00 | 0.00 | 0.00 | 3.66 |
970 | 7410 | 2.045326 | TCCCACTAGGTATTGTCCCACT | 59.955 | 50.000 | 0.00 | 0.00 | 36.75 | 4.00 |
971 | 7411 | 2.474112 | TCCCACTAGGTATTGTCCCAC | 58.526 | 52.381 | 0.00 | 0.00 | 36.75 | 4.61 |
972 | 7412 | 2.953093 | TCCCACTAGGTATTGTCCCA | 57.047 | 50.000 | 0.00 | 0.00 | 36.75 | 4.37 |
973 | 7413 | 4.461198 | CAAATCCCACTAGGTATTGTCCC | 58.539 | 47.826 | 0.00 | 0.00 | 36.75 | 4.46 |
974 | 7414 | 4.165372 | TCCAAATCCCACTAGGTATTGTCC | 59.835 | 45.833 | 0.00 | 0.00 | 36.75 | 4.02 |
975 | 7415 | 5.130477 | TCTCCAAATCCCACTAGGTATTGTC | 59.870 | 44.000 | 0.00 | 0.00 | 36.75 | 3.18 |
976 | 7416 | 5.036916 | TCTCCAAATCCCACTAGGTATTGT | 58.963 | 41.667 | 0.00 | 0.00 | 36.75 | 2.71 |
977 | 7417 | 5.630415 | TCTCCAAATCCCACTAGGTATTG | 57.370 | 43.478 | 0.00 | 0.00 | 36.75 | 1.90 |
978 | 7418 | 6.605119 | CATTCTCCAAATCCCACTAGGTATT | 58.395 | 40.000 | 0.00 | 0.00 | 36.75 | 1.89 |
979 | 7419 | 5.456763 | GCATTCTCCAAATCCCACTAGGTAT | 60.457 | 44.000 | 0.00 | 0.00 | 36.75 | 2.73 |
980 | 7420 | 4.141482 | GCATTCTCCAAATCCCACTAGGTA | 60.141 | 45.833 | 0.00 | 0.00 | 36.75 | 3.08 |
981 | 7421 | 3.372025 | GCATTCTCCAAATCCCACTAGGT | 60.372 | 47.826 | 0.00 | 0.00 | 36.75 | 3.08 |
982 | 7422 | 3.217626 | GCATTCTCCAAATCCCACTAGG | 58.782 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
983 | 7423 | 3.881688 | CTGCATTCTCCAAATCCCACTAG | 59.118 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
984 | 7424 | 3.523157 | TCTGCATTCTCCAAATCCCACTA | 59.477 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
985 | 7425 | 2.309755 | TCTGCATTCTCCAAATCCCACT | 59.690 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
986 | 7426 | 2.726821 | TCTGCATTCTCCAAATCCCAC | 58.273 | 47.619 | 0.00 | 0.00 | 0.00 | 4.61 |
987 | 7427 | 3.454719 | TTCTGCATTCTCCAAATCCCA | 57.545 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
988 | 7428 | 5.047519 | CCATATTCTGCATTCTCCAAATCCC | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
989 | 7429 | 5.771666 | TCCATATTCTGCATTCTCCAAATCC | 59.228 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
990 | 7430 | 6.889301 | TCCATATTCTGCATTCTCCAAATC | 57.111 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
991 | 7431 | 7.418254 | GGTTTCCATATTCTGCATTCTCCAAAT | 60.418 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
992 | 7432 | 6.127366 | GGTTTCCATATTCTGCATTCTCCAAA | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
993 | 7433 | 5.360714 | GGTTTCCATATTCTGCATTCTCCAA | 59.639 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
994 | 7434 | 4.889409 | GGTTTCCATATTCTGCATTCTCCA | 59.111 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
995 | 7435 | 4.279420 | GGGTTTCCATATTCTGCATTCTCC | 59.721 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
996 | 7436 | 5.136105 | AGGGTTTCCATATTCTGCATTCTC | 58.864 | 41.667 | 0.00 | 0.00 | 34.83 | 2.87 |
997 | 7437 | 5.134725 | AGGGTTTCCATATTCTGCATTCT | 57.865 | 39.130 | 0.00 | 0.00 | 34.83 | 2.40 |
998 | 7438 | 4.023707 | CGAGGGTTTCCATATTCTGCATTC | 60.024 | 45.833 | 0.00 | 0.00 | 34.83 | 2.67 |
999 | 7439 | 3.885297 | CGAGGGTTTCCATATTCTGCATT | 59.115 | 43.478 | 0.00 | 0.00 | 34.83 | 3.56 |
1000 | 7440 | 3.136443 | TCGAGGGTTTCCATATTCTGCAT | 59.864 | 43.478 | 0.00 | 0.00 | 34.83 | 3.96 |
1001 | 7441 | 2.503765 | TCGAGGGTTTCCATATTCTGCA | 59.496 | 45.455 | 0.00 | 0.00 | 34.83 | 4.41 |
1002 | 7442 | 3.194005 | TCGAGGGTTTCCATATTCTGC | 57.806 | 47.619 | 0.00 | 0.00 | 34.83 | 4.26 |
1003 | 7443 | 4.993584 | CAGATCGAGGGTTTCCATATTCTG | 59.006 | 45.833 | 0.00 | 0.00 | 34.83 | 3.02 |
1004 | 7444 | 4.503991 | GCAGATCGAGGGTTTCCATATTCT | 60.504 | 45.833 | 0.00 | 0.00 | 34.83 | 2.40 |
1005 | 7445 | 3.748568 | GCAGATCGAGGGTTTCCATATTC | 59.251 | 47.826 | 0.00 | 0.00 | 34.83 | 1.75 |
1006 | 7446 | 3.136443 | TGCAGATCGAGGGTTTCCATATT | 59.864 | 43.478 | 0.00 | 0.00 | 34.83 | 1.28 |
1007 | 7447 | 2.705658 | TGCAGATCGAGGGTTTCCATAT | 59.294 | 45.455 | 0.00 | 0.00 | 34.83 | 1.78 |
1008 | 7448 | 2.115427 | TGCAGATCGAGGGTTTCCATA | 58.885 | 47.619 | 0.00 | 0.00 | 34.83 | 2.74 |
1009 | 7449 | 0.911769 | TGCAGATCGAGGGTTTCCAT | 59.088 | 50.000 | 0.00 | 0.00 | 34.83 | 3.41 |
1010 | 7450 | 0.036388 | GTGCAGATCGAGGGTTTCCA | 60.036 | 55.000 | 0.00 | 0.00 | 34.83 | 3.53 |
1011 | 7451 | 0.036388 | TGTGCAGATCGAGGGTTTCC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
1012 | 7452 | 1.338200 | ACTGTGCAGATCGAGGGTTTC | 60.338 | 52.381 | 6.17 | 0.00 | 0.00 | 2.78 |
1013 | 7453 | 0.687354 | ACTGTGCAGATCGAGGGTTT | 59.313 | 50.000 | 6.17 | 0.00 | 0.00 | 3.27 |
1014 | 7454 | 1.557099 | TACTGTGCAGATCGAGGGTT | 58.443 | 50.000 | 6.17 | 0.00 | 0.00 | 4.11 |
1015 | 7455 | 1.204941 | GTTACTGTGCAGATCGAGGGT | 59.795 | 52.381 | 6.17 | 0.00 | 0.00 | 4.34 |
1016 | 7456 | 1.478510 | AGTTACTGTGCAGATCGAGGG | 59.521 | 52.381 | 6.17 | 0.00 | 0.00 | 4.30 |
1017 | 7457 | 2.425312 | AGAGTTACTGTGCAGATCGAGG | 59.575 | 50.000 | 6.17 | 0.00 | 0.00 | 4.63 |
1018 | 7458 | 3.376859 | AGAGAGTTACTGTGCAGATCGAG | 59.623 | 47.826 | 6.17 | 0.00 | 0.00 | 4.04 |
1019 | 7459 | 3.348119 | AGAGAGTTACTGTGCAGATCGA | 58.652 | 45.455 | 6.17 | 0.00 | 0.00 | 3.59 |
1020 | 7460 | 3.773860 | AGAGAGTTACTGTGCAGATCG | 57.226 | 47.619 | 6.17 | 0.00 | 0.00 | 3.69 |
1021 | 7461 | 6.437928 | CAGATAGAGAGTTACTGTGCAGATC | 58.562 | 44.000 | 6.17 | 0.00 | 0.00 | 2.75 |
1022 | 7462 | 5.301551 | CCAGATAGAGAGTTACTGTGCAGAT | 59.698 | 44.000 | 6.17 | 0.00 | 0.00 | 2.90 |
1023 | 7463 | 4.642437 | CCAGATAGAGAGTTACTGTGCAGA | 59.358 | 45.833 | 6.17 | 0.00 | 0.00 | 4.26 |
1024 | 7464 | 4.400884 | ACCAGATAGAGAGTTACTGTGCAG | 59.599 | 45.833 | 0.00 | 0.00 | 0.00 | 4.41 |
1025 | 7465 | 4.344978 | ACCAGATAGAGAGTTACTGTGCA | 58.655 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
1026 | 7466 | 4.496673 | CGACCAGATAGAGAGTTACTGTGC | 60.497 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1027 | 7467 | 4.496673 | GCGACCAGATAGAGAGTTACTGTG | 60.497 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1028 | 7468 | 3.628487 | GCGACCAGATAGAGAGTTACTGT | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 3.55 |
1029 | 7469 | 3.628032 | TGCGACCAGATAGAGAGTTACTG | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
1030 | 7470 | 3.887352 | TGCGACCAGATAGAGAGTTACT | 58.113 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
1031 | 7471 | 4.839668 | ATGCGACCAGATAGAGAGTTAC | 57.160 | 45.455 | 0.00 | 0.00 | 0.00 | 2.50 |
1032 | 7472 | 5.943706 | GTATGCGACCAGATAGAGAGTTA | 57.056 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
1033 | 7473 | 4.839668 | GTATGCGACCAGATAGAGAGTT | 57.160 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1046 | 7486 | 1.338200 | GGGGATCATCTGGTATGCGAC | 60.338 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
1047 | 7487 | 0.976641 | GGGGATCATCTGGTATGCGA | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 5.10 |
1048 | 7488 | 0.390340 | CGGGGATCATCTGGTATGCG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.73 |
1049 | 7489 | 0.687354 | ACGGGGATCATCTGGTATGC | 59.313 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 |
1050 | 7490 | 3.617531 | GCTTACGGGGATCATCTGGTATG | 60.618 | 52.174 | 0.00 | 0.00 | 0.00 | 2.39 |
1051 | 7491 | 2.567615 | GCTTACGGGGATCATCTGGTAT | 59.432 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1052 | 7492 | 1.968493 | GCTTACGGGGATCATCTGGTA | 59.032 | 52.381 | 0.00 | 0.00 | 0.00 | 3.25 |
1053 | 7493 | 0.759346 | GCTTACGGGGATCATCTGGT | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1054 | 7494 | 1.001406 | GAGCTTACGGGGATCATCTGG | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
1055 | 7495 | 1.688735 | TGAGCTTACGGGGATCATCTG | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1056 | 7496 | 2.088104 | TGAGCTTACGGGGATCATCT | 57.912 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1057 | 7497 | 2.365617 | TCTTGAGCTTACGGGGATCATC | 59.634 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1058 | 7498 | 2.398588 | TCTTGAGCTTACGGGGATCAT | 58.601 | 47.619 | 0.00 | 0.00 | 0.00 | 2.45 |
1059 | 7499 | 1.860641 | TCTTGAGCTTACGGGGATCA | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1060 | 7500 | 2.981859 | TTCTTGAGCTTACGGGGATC | 57.018 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1061 | 7501 | 3.041946 | AGATTCTTGAGCTTACGGGGAT | 58.958 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1062 | 7502 | 2.168521 | CAGATTCTTGAGCTTACGGGGA | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1063 | 7503 | 2.093447 | ACAGATTCTTGAGCTTACGGGG | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
1064 | 7504 | 3.190874 | GACAGATTCTTGAGCTTACGGG | 58.809 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1065 | 7505 | 3.190874 | GGACAGATTCTTGAGCTTACGG | 58.809 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1066 | 7506 | 3.849911 | TGGACAGATTCTTGAGCTTACG | 58.150 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
1067 | 7507 | 5.703130 | AGTTTGGACAGATTCTTGAGCTTAC | 59.297 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
1068 | 7508 | 5.869579 | AGTTTGGACAGATTCTTGAGCTTA | 58.130 | 37.500 | 0.00 | 0.00 | 0.00 | 3.09 |
1069 | 7509 | 4.723309 | AGTTTGGACAGATTCTTGAGCTT | 58.277 | 39.130 | 0.00 | 0.00 | 0.00 | 3.74 |
1070 | 7510 | 4.363991 | AGTTTGGACAGATTCTTGAGCT | 57.636 | 40.909 | 0.00 | 0.00 | 0.00 | 4.09 |
1071 | 7511 | 5.934625 | TCTAAGTTTGGACAGATTCTTGAGC | 59.065 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1072 | 7512 | 7.969536 | TTCTAAGTTTGGACAGATTCTTGAG | 57.030 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1073 | 7513 | 8.378565 | AGATTCTAAGTTTGGACAGATTCTTGA | 58.621 | 33.333 | 0.00 | 0.00 | 28.35 | 3.02 |
1074 | 7514 | 8.558973 | AGATTCTAAGTTTGGACAGATTCTTG | 57.441 | 34.615 | 0.00 | 0.00 | 28.35 | 3.02 |
1076 | 7516 | 9.883142 | CTAAGATTCTAAGTTTGGACAGATTCT | 57.117 | 33.333 | 0.00 | 0.00 | 32.11 | 2.40 |
1077 | 7517 | 9.877178 | TCTAAGATTCTAAGTTTGGACAGATTC | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1080 | 7520 | 8.423906 | AGTCTAAGATTCTAAGTTTGGACAGA | 57.576 | 34.615 | 0.00 | 0.00 | 34.63 | 3.41 |
1084 | 7524 | 8.871125 | AGACAAGTCTAAGATTCTAAGTTTGGA | 58.129 | 33.333 | 0.00 | 0.00 | 38.35 | 3.53 |
1104 | 7544 | 6.430925 | TCCCATTCATTGTGTTAGAAGACAAG | 59.569 | 38.462 | 10.30 | 4.14 | 43.98 | 3.16 |
1137 | 7730 | 3.702548 | TCTGCATTCTCCAAATCCCATTG | 59.297 | 43.478 | 0.00 | 0.00 | 0.00 | 2.82 |
1139 | 7732 | 3.675348 | TCTGCATTCTCCAAATCCCAT | 57.325 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
1142 | 7888 | 5.771666 | TCCATATTCTGCATTCTCCAAATCC | 59.228 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1239 | 8291 | 8.306761 | AGAAGATTTTCGTTCAATAAAAGCCAT | 58.693 | 29.630 | 0.00 | 0.00 | 38.38 | 4.40 |
1257 | 8309 | 5.134339 | TGGTAATGGGCCAGATAGAAGATTT | 59.866 | 40.000 | 13.78 | 0.00 | 0.00 | 2.17 |
1269 | 8321 | 1.202952 | ACGTTTTCTGGTAATGGGCCA | 60.203 | 47.619 | 9.61 | 9.61 | 34.42 | 5.36 |
1276 | 8328 | 5.291614 | GTGACTGTGTAACGTTTTCTGGTAA | 59.708 | 40.000 | 5.91 | 0.00 | 42.39 | 2.85 |
1298 | 8350 | 5.711976 | AGTTGGAAGATGGAGGTTAATTGTG | 59.288 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1319 | 8374 | 8.429641 | TCAGTTGGTTACTAGAGAAATTGAGTT | 58.570 | 33.333 | 0.00 | 0.00 | 34.56 | 3.01 |
1320 | 8375 | 7.873505 | GTCAGTTGGTTACTAGAGAAATTGAGT | 59.126 | 37.037 | 0.00 | 0.00 | 34.56 | 3.41 |
1321 | 8376 | 7.062371 | CGTCAGTTGGTTACTAGAGAAATTGAG | 59.938 | 40.741 | 0.00 | 0.00 | 34.56 | 3.02 |
1376 | 8431 | 6.295518 | GGAAAGAAAGCTCCATTGGAATCTTT | 60.296 | 38.462 | 22.54 | 22.54 | 37.32 | 2.52 |
1383 | 8438 | 3.306294 | GGTTGGAAAGAAAGCTCCATTGG | 60.306 | 47.826 | 0.00 | 0.00 | 41.36 | 3.16 |
1404 | 8459 | 0.179045 | CGGAGGAACATAAGCCAGGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1407 | 8462 | 0.539986 | GGTCGGAGGAACATAAGCCA | 59.460 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1423 | 8478 | 0.673985 | GGAAGGTTGCCAAAGTGGTC | 59.326 | 55.000 | 0.00 | 0.00 | 40.46 | 4.02 |
1434 | 8489 | 0.331278 | TGGGGCACATAGGAAGGTTG | 59.669 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1450 | 8505 | 3.087031 | ACATCTTCAAGTGCAATCTGGG | 58.913 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
1545 | 8600 | 4.383173 | CCTTTTGCTTTGAGGAAAATGCT | 58.617 | 39.130 | 7.62 | 0.00 | 43.01 | 3.79 |
1553 | 8608 | 0.890683 | ATCCGCCTTTTGCTTTGAGG | 59.109 | 50.000 | 0.00 | 0.00 | 38.05 | 3.86 |
1568 | 8623 | 1.379710 | TGTGGAAATGGGGCATCCG | 60.380 | 57.895 | 0.00 | 0.00 | 38.76 | 4.18 |
1569 | 8624 | 0.324645 | ACTGTGGAAATGGGGCATCC | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1824 | 8879 | 5.535333 | AGCAACTTTATGATATTGGCATGC | 58.465 | 37.500 | 9.90 | 9.90 | 0.00 | 4.06 |
1938 | 8993 | 5.619625 | GTCTAGTTGTACTAGTCGTTGGT | 57.380 | 43.478 | 0.00 | 0.00 | 46.31 | 3.67 |
2065 | 9123 | 3.954904 | TCCAGTAGGATGTTGCTAGACTC | 59.045 | 47.826 | 0.00 | 0.00 | 39.61 | 3.36 |
2100 | 9158 | 0.179189 | CAAAGTCCGCAATCTTCGCC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2103 | 9161 | 2.427506 | AGACCAAAGTCCGCAATCTTC | 58.572 | 47.619 | 0.00 | 0.00 | 44.72 | 2.87 |
2233 | 9313 | 6.019640 | GTGTAAGTAGTTGTTCACGCAGTTAA | 60.020 | 38.462 | 0.00 | 0.00 | 41.61 | 2.01 |
2240 | 9332 | 5.917541 | AATGGTGTAAGTAGTTGTTCACG | 57.082 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
2241 | 9333 | 7.023197 | ACAAATGGTGTAAGTAGTTGTTCAC | 57.977 | 36.000 | 0.00 | 0.64 | 39.29 | 3.18 |
2242 | 9334 | 7.633193 | AACAAATGGTGTAAGTAGTTGTTCA | 57.367 | 32.000 | 0.00 | 0.00 | 40.60 | 3.18 |
2243 | 9335 | 8.803799 | CAAAACAAATGGTGTAAGTAGTTGTTC | 58.196 | 33.333 | 0.00 | 0.00 | 40.38 | 3.18 |
2245 | 9337 | 7.832769 | ACAAAACAAATGGTGTAAGTAGTTGT | 58.167 | 30.769 | 0.00 | 0.00 | 40.60 | 3.32 |
2246 | 9338 | 9.445786 | CTACAAAACAAATGGTGTAAGTAGTTG | 57.554 | 33.333 | 0.00 | 0.00 | 40.60 | 3.16 |
2247 | 9339 | 9.398538 | TCTACAAAACAAATGGTGTAAGTAGTT | 57.601 | 29.630 | 0.00 | 0.00 | 40.60 | 2.24 |
2248 | 9340 | 8.967664 | TCTACAAAACAAATGGTGTAAGTAGT | 57.032 | 30.769 | 0.00 | 0.00 | 40.60 | 2.73 |
2251 | 9343 | 9.744468 | GAATTCTACAAAACAAATGGTGTAAGT | 57.256 | 29.630 | 0.00 | 0.00 | 40.60 | 2.24 |
2252 | 9344 | 8.901748 | CGAATTCTACAAAACAAATGGTGTAAG | 58.098 | 33.333 | 3.52 | 0.00 | 40.60 | 2.34 |
2253 | 9345 | 7.863375 | CCGAATTCTACAAAACAAATGGTGTAA | 59.137 | 33.333 | 3.52 | 0.00 | 40.60 | 2.41 |
2254 | 9346 | 7.228906 | TCCGAATTCTACAAAACAAATGGTGTA | 59.771 | 33.333 | 3.52 | 0.00 | 40.60 | 2.90 |
2255 | 9347 | 6.039941 | TCCGAATTCTACAAAACAAATGGTGT | 59.960 | 34.615 | 3.52 | 0.00 | 44.64 | 4.16 |
2256 | 9348 | 6.442952 | TCCGAATTCTACAAAACAAATGGTG | 58.557 | 36.000 | 3.52 | 0.00 | 0.00 | 4.17 |
2260 | 9358 | 6.981722 | AGCTTCCGAATTCTACAAAACAAAT | 58.018 | 32.000 | 3.52 | 0.00 | 0.00 | 2.32 |
2264 | 9362 | 4.387862 | TCGAGCTTCCGAATTCTACAAAAC | 59.612 | 41.667 | 3.52 | 0.00 | 35.42 | 2.43 |
2269 | 9367 | 3.694535 | TCTCGAGCTTCCGAATTCTAC | 57.305 | 47.619 | 7.81 | 0.00 | 38.17 | 2.59 |
2274 | 9372 | 3.131223 | TCATCTTTCTCGAGCTTCCGAAT | 59.869 | 43.478 | 7.81 | 0.00 | 38.17 | 3.34 |
2334 | 9432 | 0.116342 | TCCCTGTTACCAGCTCCAGA | 59.884 | 55.000 | 0.00 | 0.00 | 37.38 | 3.86 |
2424 | 9522 | 7.167535 | TCAGATTTGTCAAATGTATGTCCTCA | 58.832 | 34.615 | 15.52 | 0.00 | 0.00 | 3.86 |
2425 | 9523 | 7.615582 | TCAGATTTGTCAAATGTATGTCCTC | 57.384 | 36.000 | 15.52 | 0.00 | 0.00 | 3.71 |
2426 | 9524 | 9.334947 | CTATCAGATTTGTCAAATGTATGTCCT | 57.665 | 33.333 | 15.52 | 2.00 | 0.00 | 3.85 |
2433 | 9531 | 7.555195 | TCTGCATCTATCAGATTTGTCAAATGT | 59.445 | 33.333 | 15.52 | 8.81 | 35.81 | 2.71 |
2645 | 9743 | 2.159014 | ACAGTGTGCGTCTCCTTGTAAA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
2648 | 9746 | 0.530650 | CACAGTGTGCGTCTCCTTGT | 60.531 | 55.000 | 10.97 | 0.00 | 0.00 | 3.16 |
2652 | 9750 | 0.814010 | AAACCACAGTGTGCGTCTCC | 60.814 | 55.000 | 18.21 | 0.00 | 31.34 | 3.71 |
2658 | 9756 | 6.313744 | AGTTAGAATAAAACCACAGTGTGC | 57.686 | 37.500 | 18.21 | 1.47 | 31.34 | 4.57 |
2660 | 9758 | 9.841295 | TCTTTAGTTAGAATAAAACCACAGTGT | 57.159 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
2696 | 9794 | 5.401079 | CGTGTTGCCCTTACAGTTTTATTTG | 59.599 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2701 | 9799 | 1.679153 | CCGTGTTGCCCTTACAGTTTT | 59.321 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
2708 | 9806 | 1.481901 | TACAGCCCGTGTTGCCCTTA | 61.482 | 55.000 | 0.00 | 0.00 | 40.94 | 2.69 |
2715 | 9813 | 4.389687 | CGTAATAAAACTACAGCCCGTGTT | 59.610 | 41.667 | 0.00 | 0.00 | 40.94 | 3.32 |
2720 | 9818 | 7.260603 | TCTTACTCGTAATAAAACTACAGCCC | 58.739 | 38.462 | 0.00 | 0.00 | 0.00 | 5.19 |
2793 | 9891 | 0.320771 | AACAGGATCGACAGCCACAC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2803 | 9901 | 8.480643 | AAACTGAATCTAAGTAAACAGGATCG | 57.519 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
2818 | 9916 | 6.767902 | TCAGTGCTTGACTTTAAACTGAATCT | 59.232 | 34.615 | 1.04 | 0.00 | 40.63 | 2.40 |
2838 | 9938 | 7.327975 | TGTTTATACCCATACTCTGTTCAGTG | 58.672 | 38.462 | 0.00 | 0.45 | 0.00 | 3.66 |
2853 | 9953 | 4.523083 | TGCAGAACCAGATGTTTATACCC | 58.477 | 43.478 | 0.00 | 0.00 | 37.29 | 3.69 |
2856 | 9956 | 5.428253 | GACCTGCAGAACCAGATGTTTATA | 58.572 | 41.667 | 17.39 | 0.00 | 37.29 | 0.98 |
2864 | 9964 | 2.061220 | CAGGACCTGCAGAACCAGA | 58.939 | 57.895 | 17.39 | 0.00 | 34.77 | 3.86 |
2941 | 10070 | 5.326200 | AGTAGTAAGAATAACAGCACGCT | 57.674 | 39.130 | 0.00 | 0.00 | 0.00 | 5.07 |
2942 | 10071 | 6.493116 | TCTAGTAGTAAGAATAACAGCACGC | 58.507 | 40.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3028 | 10185 | 3.729862 | TGCTGACATTGCACATTTTCA | 57.270 | 38.095 | 0.00 | 0.00 | 35.31 | 2.69 |
3029 | 10186 | 3.991773 | ACATGCTGACATTGCACATTTTC | 59.008 | 39.130 | 0.00 | 0.00 | 43.59 | 2.29 |
3062 | 10249 | 9.753674 | AACCTCAAATTAAATAGGATCAACAGA | 57.246 | 29.630 | 0.00 | 0.00 | 33.16 | 3.41 |
3125 | 10312 | 6.526674 | CGCAAGGTTACCAAAATAAGATGTTC | 59.473 | 38.462 | 3.51 | 0.00 | 0.00 | 3.18 |
3133 | 10320 | 4.135306 | TGACACGCAAGGTTACCAAAATA | 58.865 | 39.130 | 3.51 | 0.00 | 46.39 | 1.40 |
3199 | 10469 | 6.091441 | GTCTACAGAAAGTAACAGCATCCAAG | 59.909 | 42.308 | 0.00 | 0.00 | 30.92 | 3.61 |
3204 | 10474 | 7.801716 | TTTTGTCTACAGAAAGTAACAGCAT | 57.198 | 32.000 | 0.00 | 0.00 | 30.79 | 3.79 |
3226 | 10496 | 9.136323 | AGATTCTGACAGACACCTTTTTATTTT | 57.864 | 29.630 | 4.15 | 0.00 | 0.00 | 1.82 |
3230 | 10502 | 6.826668 | TCAGATTCTGACAGACACCTTTTTA | 58.173 | 36.000 | 12.38 | 0.00 | 35.39 | 1.52 |
3243 | 10515 | 4.695396 | AGACTGCATCATCAGATTCTGAC | 58.305 | 43.478 | 18.35 | 6.42 | 43.63 | 3.51 |
3246 | 10518 | 4.409574 | AGGAAGACTGCATCATCAGATTCT | 59.590 | 41.667 | 0.00 | 0.00 | 37.51 | 2.40 |
3248 | 10520 | 4.774660 | AGGAAGACTGCATCATCAGATT | 57.225 | 40.909 | 0.00 | 0.00 | 37.51 | 2.40 |
3249 | 10521 | 4.163649 | TGAAGGAAGACTGCATCATCAGAT | 59.836 | 41.667 | 0.00 | 0.00 | 37.51 | 2.90 |
3251 | 10523 | 3.870274 | TGAAGGAAGACTGCATCATCAG | 58.130 | 45.455 | 0.00 | 0.00 | 39.86 | 2.90 |
3285 | 10557 | 4.562757 | GGCATCTACCAACACTTGTGTAGA | 60.563 | 45.833 | 6.84 | 10.41 | 42.28 | 2.59 |
3308 | 10580 | 7.660617 | AGATTTATATTGTGTCAGCAGGATCTG | 59.339 | 37.037 | 0.00 | 0.00 | 35.46 | 2.90 |
3341 | 10613 | 2.242113 | CAGTGCTGCACAACCTCTC | 58.758 | 57.895 | 31.90 | 5.04 | 36.74 | 3.20 |
3398 | 10677 | 6.312426 | GTGGTGTACATCTTCAGATCTTCTTG | 59.688 | 42.308 | 7.81 | 0.00 | 31.21 | 3.02 |
3452 | 10734 | 7.094592 | GCATAATCTACAAAAATCTAGCCTCCC | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
3497 | 10779 | 7.070447 | TGTGATGTTAAGCAGGAAGATATCTCT | 59.930 | 37.037 | 5.51 | 0.00 | 0.00 | 3.10 |
3519 | 10801 | 2.481276 | CGCTCCGTGAAATATCCTGTGA | 60.481 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3522 | 10804 | 2.509052 | TCGCTCCGTGAAATATCCTG | 57.491 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3544 | 10826 | 2.280628 | GAAAAGGCGAGGAATCGACAT | 58.719 | 47.619 | 6.25 | 0.00 | 44.93 | 3.06 |
3564 | 10846 | 0.880441 | TTGATGGACACATTGTGCCG | 59.120 | 50.000 | 16.62 | 0.00 | 37.97 | 5.69 |

Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.