Multiple sequence alignment - TraesCS7D01G073600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G073600 chr7D 100.000 5991 0 0 1 5991 43199519 43205509 0.000000e+00 11064.0
1 TraesCS7D01G073600 chr7D 88.546 1781 114 38 2703 4421 437640302 437638550 0.000000e+00 2076.0
2 TraesCS7D01G073600 chr7D 89.318 1011 88 9 760 1759 437645424 437644423 0.000000e+00 1251.0
3 TraesCS7D01G073600 chr7D 90.024 842 64 11 4424 5260 437638512 437637686 0.000000e+00 1072.0
4 TraesCS7D01G073600 chr7D 91.241 411 30 6 2260 2668 437640712 437640306 6.780000e-154 555.0
5 TraesCS7D01G073600 chr7D 90.558 233 18 2 1830 2061 437642314 437642085 7.540000e-79 305.0
6 TraesCS7D01G073600 chr7D 90.521 211 16 3 2055 2262 437642048 437641839 5.910000e-70 276.0
7 TraesCS7D01G073600 chr7A 88.286 2561 174 47 2703 5165 488153984 488151452 0.000000e+00 2952.0
8 TraesCS7D01G073600 chr7A 88.325 2561 168 49 2703 5165 488488855 488486328 0.000000e+00 2952.0
9 TraesCS7D01G073600 chr7A 91.481 1526 69 25 2696 4181 43048471 43049975 0.000000e+00 2041.0
10 TraesCS7D01G073600 chr7A 90.812 1121 75 14 4431 5544 43062129 43063228 0.000000e+00 1474.0
11 TraesCS7D01G073600 chr7A 92.879 997 54 9 803 1783 43046403 43047398 0.000000e+00 1432.0
12 TraesCS7D01G073600 chr7A 88.496 1017 88 14 760 1760 488159411 488158408 0.000000e+00 1203.0
13 TraesCS7D01G073600 chr7A 89.959 737 65 5 760 1495 488499722 488498994 0.000000e+00 942.0
14 TraesCS7D01G073600 chr7A 93.344 631 35 6 2051 2677 43047861 43048488 0.000000e+00 926.0
15 TraesCS7D01G073600 chr7A 92.252 413 27 4 2257 2668 488489267 488488859 1.120000e-161 580.0
16 TraesCS7D01G073600 chr7A 92.010 413 28 4 2257 2668 488154396 488153988 5.210000e-160 575.0
17 TraesCS7D01G073600 chr7A 84.302 516 31 16 261 748 43045732 43046225 5.470000e-125 459.0
18 TraesCS7D01G073600 chr7A 89.256 242 22 3 1823 2064 488491189 488490952 3.510000e-77 300.0
19 TraesCS7D01G073600 chr7A 91.705 217 13 4 2051 2262 488490925 488490709 4.540000e-76 296.0
20 TraesCS7D01G073600 chr7A 88.843 242 23 3 1823 2064 488156323 488156086 1.630000e-75 294.0
21 TraesCS7D01G073600 chr7A 89.862 217 15 5 2051 2262 488156059 488155845 7.650000e-69 272.0
22 TraesCS7D01G073600 chr7A 90.511 137 9 2 1927 2063 43047701 43047833 1.720000e-40 178.0
23 TraesCS7D01G073600 chr7A 87.395 119 10 2 1643 1760 488496069 488495955 1.350000e-26 132.0
24 TraesCS7D01G073600 chr7A 100.000 30 0 0 784 813 488159485 488159456 8.390000e-04 56.5
25 TraesCS7D01G073600 chr7A 100.000 30 0 0 784 813 488499802 488499773 8.390000e-04 56.5
26 TraesCS7D01G073600 chr7A 100.000 29 0 0 1851 1879 43047678 43047706 3.000000e-03 54.7
27 TraesCS7D01G073600 chr4A 94.451 1766 55 20 2696 4421 651349270 651351032 0.000000e+00 2678.0
28 TraesCS7D01G073600 chr4A 89.522 1193 80 21 4424 5600 651351070 651352233 0.000000e+00 1469.0
29 TraesCS7D01G073600 chr4A 90.551 1016 71 14 789 1783 651347179 651348190 0.000000e+00 1321.0
30 TraesCS7D01G073600 chr4A 93.182 616 26 5 2064 2677 651348686 651349287 0.000000e+00 891.0
31 TraesCS7D01G073600 chr4A 82.514 732 45 22 49 722 651346476 651347182 3.130000e-157 566.0
32 TraesCS7D01G073600 chr4A 96.203 79 3 0 1983 2061 651348563 651348641 4.870000e-26 130.0
33 TraesCS7D01G073600 chr4A 84.034 119 9 3 5608 5717 651352282 651352399 8.210000e-19 106.0
34 TraesCS7D01G073600 chr7B 89.815 1787 103 36 2703 4421 456493659 456495434 0.000000e+00 2218.0
35 TraesCS7D01G073600 chr7B 89.192 953 85 9 760 1700 456488212 456489158 0.000000e+00 1173.0
36 TraesCS7D01G073600 chr7B 89.379 612 50 8 4424 5030 456495472 456496073 0.000000e+00 756.0
37 TraesCS7D01G073600 chr7B 91.041 413 30 5 2257 2668 456493249 456493655 8.780000e-153 551.0
38 TraesCS7D01G073600 chr7B 89.451 237 22 1 1823 2059 456491386 456491619 4.540000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G073600 chr7D 43199519 43205509 5990 False 11064.000000 11064 100.000000 1 5991 1 chr7D.!!$F1 5990
1 TraesCS7D01G073600 chr7D 437637686 437645424 7738 True 922.500000 2076 90.034667 760 5260 6 chr7D.!!$R1 4500
2 TraesCS7D01G073600 chr7A 43062129 43063228 1099 False 1474.000000 1474 90.812000 4431 5544 1 chr7A.!!$F1 1113
3 TraesCS7D01G073600 chr7A 488486328 488491189 4861 True 1032.000000 2952 90.384500 1823 5165 4 chr7A.!!$R2 3342
4 TraesCS7D01G073600 chr7A 488151452 488159485 8033 True 892.083333 2952 91.249500 760 5165 6 chr7A.!!$R1 4405
5 TraesCS7D01G073600 chr7A 43045732 43049975 4243 False 848.450000 2041 92.086167 261 4181 6 chr7A.!!$F2 3920
6 TraesCS7D01G073600 chr7A 488495955 488499802 3847 True 376.833333 942 92.451333 760 1760 3 chr7A.!!$R3 1000
7 TraesCS7D01G073600 chr4A 651346476 651352399 5923 False 1023.000000 2678 90.065286 49 5717 7 chr4A.!!$F1 5668
8 TraesCS7D01G073600 chr7B 456488212 456496073 7861 False 998.800000 2218 89.775600 760 5030 5 chr7B.!!$F1 4270

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
115 119 0.258774 TATCCCTTTTGCTGGGCCTC 59.741 55.000 4.53 0.0 44.23 4.70 F
1608 1880 1.341209 CATCGCTGTGCTGGTATCCTA 59.659 52.381 0.00 0.0 0.00 2.94 F
2038 7539 0.108804 TCTCCAAAGTCCGATGACGC 60.109 55.000 0.00 0.0 46.51 5.19 F
2382 9520 0.249955 TGCGACATGCCATCTCTTCA 59.750 50.000 0.00 0.0 45.60 3.02 F
2891 10032 0.598065 GTCGAGCAATTGTTTGGGCT 59.402 50.000 7.40 0.0 39.75 5.19 F
4467 11736 0.102844 GTGCTGTCCTTTTGCTTGCA 59.897 50.000 0.00 0.0 0.00 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 4724 0.537143 AAAGGGTCGCTGCATTGACA 60.537 50.0 17.23 0.0 36.83 3.58 R
3511 10669 0.390860 TGTTGCCCAATCCCGTTTTG 59.609 50.0 0.00 0.0 0.00 2.44 R
3635 10821 0.035458 GCGTATGAGGGGGAATCAGG 59.965 60.0 0.00 0.0 0.00 3.86 R
4276 11487 2.777832 AGTCTTGAGCTGGACATTCC 57.222 50.0 0.00 0.0 36.96 3.01 R
4803 12078 0.536006 AACCTGGCAAGTGAGCTGAC 60.536 55.0 0.00 0.0 34.17 3.51 R
5944 13283 0.104487 CCGCTGAGCTGATCTCACAT 59.896 55.0 1.78 0.0 46.34 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.274067 CAACTAGGGCCCAAACGC 58.726 61.111 27.56 0.00 0.00 4.84
23 24 2.550699 TAGGGCCCAAACGCATCTGG 62.551 60.000 27.56 0.00 0.00 3.86
24 25 4.133796 GGCCCAAACGCATCTGGC 62.134 66.667 0.00 0.00 41.42 4.85
26 27 2.676121 CCCAAACGCATCTGGCCA 60.676 61.111 4.71 4.71 40.31 5.36
27 28 2.053865 CCCAAACGCATCTGGCCAT 61.054 57.895 5.51 0.00 40.31 4.40
28 29 1.606885 CCCAAACGCATCTGGCCATT 61.607 55.000 5.51 0.00 40.31 3.16
29 30 0.458889 CCAAACGCATCTGGCCATTG 60.459 55.000 5.51 8.87 40.31 2.82
30 31 0.527113 CAAACGCATCTGGCCATTGA 59.473 50.000 17.64 8.49 40.31 2.57
32 33 0.527565 AACGCATCTGGCCATTGAAC 59.472 50.000 17.64 4.59 40.31 3.18
33 34 0.608856 ACGCATCTGGCCATTGAACA 60.609 50.000 17.64 0.00 40.31 3.18
34 35 0.742505 CGCATCTGGCCATTGAACAT 59.257 50.000 17.64 0.00 40.31 2.71
36 37 2.797087 CGCATCTGGCCATTGAACATTC 60.797 50.000 17.64 0.80 40.31 2.67
38 39 2.601240 TCTGGCCATTGAACATTCCA 57.399 45.000 5.51 0.00 0.00 3.53
39 40 2.886913 TCTGGCCATTGAACATTCCAA 58.113 42.857 5.51 0.00 0.00 3.53
40 41 2.562298 TCTGGCCATTGAACATTCCAAC 59.438 45.455 5.51 0.00 0.00 3.77
41 42 2.299582 CTGGCCATTGAACATTCCAACA 59.700 45.455 5.51 0.00 0.00 3.33
42 43 2.702478 TGGCCATTGAACATTCCAACAA 59.298 40.909 0.00 0.00 0.00 2.83
43 44 3.244146 TGGCCATTGAACATTCCAACAAG 60.244 43.478 0.00 0.00 0.00 3.16
44 45 3.328505 GCCATTGAACATTCCAACAAGG 58.671 45.455 0.00 0.00 39.47 3.61
45 46 3.865684 GCCATTGAACATTCCAACAAGGG 60.866 47.826 0.00 0.00 43.81 3.95
47 48 4.202346 CCATTGAACATTCCAACAAGGGTT 60.202 41.667 0.00 0.00 38.71 4.11
48 49 5.011533 CCATTGAACATTCCAACAAGGGTTA 59.988 40.000 0.00 0.00 38.71 2.85
49 50 6.463614 CCATTGAACATTCCAACAAGGGTTAA 60.464 38.462 0.00 0.00 38.71 2.01
51 52 6.739331 TGAACATTCCAACAAGGGTTAATT 57.261 33.333 0.00 0.00 38.24 1.40
52 53 6.754193 TGAACATTCCAACAAGGGTTAATTC 58.246 36.000 0.00 0.00 38.24 2.17
102 106 0.762461 GCAGCCCACTCTCTATCCCT 60.762 60.000 0.00 0.00 0.00 4.20
115 119 0.258774 TATCCCTTTTGCTGGGCCTC 59.741 55.000 4.53 0.00 44.23 4.70
138 142 2.414161 GCGAGTCAGCCCAATAACAAAC 60.414 50.000 0.00 0.00 0.00 2.93
145 149 2.625790 AGCCCAATAACAAACAGCGAAA 59.374 40.909 0.00 0.00 0.00 3.46
189 196 4.353437 GACTCGTTCCGTGCCCGT 62.353 66.667 0.00 0.00 0.00 5.28
248 275 4.699522 GTGCCCCGTGTCTGTCCC 62.700 72.222 0.00 0.00 0.00 4.46
254 281 2.049433 CGTGTCTGTCCCGTGTCC 60.049 66.667 0.00 0.00 0.00 4.02
421 455 4.988716 ACCTCGTCCGTCCAGCCA 62.989 66.667 0.00 0.00 0.00 4.75
424 458 2.599281 TCGTCCGTCCAGCCAGAA 60.599 61.111 0.00 0.00 0.00 3.02
454 488 1.513586 CGTCTGGCGTCCGTACTTC 60.514 63.158 0.00 0.00 35.54 3.01
510 544 2.087646 GCCATCTCAAGTTCCTCAACC 58.912 52.381 0.00 0.00 32.22 3.77
512 546 2.040278 CCATCTCAAGTTCCTCAACCCA 59.960 50.000 0.00 0.00 32.22 4.51
529 564 5.071250 TCAACCCAAGCTTAAGTTCTACAGA 59.929 40.000 9.67 3.10 0.00 3.41
555 611 2.682856 GTGGCCGCTTGATAGATTGAAA 59.317 45.455 9.68 0.00 0.00 2.69
670 732 7.687941 TTTACAGGAAGGCAAGAAGAATAAG 57.312 36.000 0.00 0.00 0.00 1.73
740 807 2.917701 TGTATGCATTGAAACTGCCG 57.082 45.000 3.54 0.00 38.89 5.69
815 1010 8.792830 TTAGTTATCAAATCTGAACTGGAAGG 57.207 34.615 0.00 0.00 32.86 3.46
827 1022 6.100279 TCTGAACTGGAAGGTATCATATTGCT 59.900 38.462 0.00 0.00 39.30 3.91
927 1124 5.280215 GGGTGCCATAGCTTATATCAGTTCT 60.280 44.000 0.00 0.00 40.80 3.01
929 1126 6.295575 GGTGCCATAGCTTATATCAGTTCTCT 60.296 42.308 0.00 0.00 40.80 3.10
1036 1234 2.069430 CCCCTTCTCTCCCTGAGCC 61.069 68.421 0.00 0.00 42.38 4.70
1250 1456 3.260884 AGCGTCAAGGACCTGAATTTCTA 59.739 43.478 0.00 0.00 0.00 2.10
1545 1814 4.095483 AGAGCTTCGTATTTTCATTGCTGG 59.905 41.667 0.00 0.00 0.00 4.85
1608 1880 1.341209 CATCGCTGTGCTGGTATCCTA 59.659 52.381 0.00 0.00 0.00 2.94
1622 1901 6.632445 GCTGGTATCCTAAAATTTTGGCCAAT 60.632 38.462 21.26 6.36 0.00 3.16
1636 1917 3.393687 TGGCCAATACCACTATCCTCTT 58.606 45.455 0.61 0.00 33.75 2.85
1664 4662 2.118679 GCCCCATCCAGCCTTAAAAAT 58.881 47.619 0.00 0.00 0.00 1.82
1724 4724 4.881850 CCTCAACACCTTACAGTCAAACTT 59.118 41.667 0.00 0.00 0.00 2.66
1796 5433 3.462483 TTGCTCTTAACCTGACGTTCA 57.538 42.857 0.00 0.00 35.79 3.18
1807 5444 3.446516 ACCTGACGTTCAGTAATAGGACC 59.553 47.826 12.10 0.00 42.80 4.46
1828 7327 6.039382 GGACCTGACATTATCCAACCATAAAC 59.961 42.308 0.00 0.00 0.00 2.01
1898 7397 6.936222 ATATGCTATTACGAAAAGCGAGAG 57.064 37.500 0.00 0.00 44.57 3.20
1899 7398 4.106029 TGCTATTACGAAAAGCGAGAGT 57.894 40.909 0.00 0.00 44.57 3.24
1900 7399 4.103357 TGCTATTACGAAAAGCGAGAGTC 58.897 43.478 0.00 0.00 44.57 3.36
1982 7483 2.276732 AACCTGAGCAGCTTTAAGCA 57.723 45.000 19.63 0.00 45.56 3.91
2031 7532 1.740025 GCCATTCTTCTCCAAAGTCCG 59.260 52.381 0.00 0.00 0.00 4.79
2038 7539 0.108804 TCTCCAAAGTCCGATGACGC 60.109 55.000 0.00 0.00 46.51 5.19
2143 7737 3.859961 CAGCTACTGTCCAATTCGTACTG 59.140 47.826 0.00 0.00 0.00 2.74
2382 9520 0.249955 TGCGACATGCCATCTCTTCA 59.750 50.000 0.00 0.00 45.60 3.02
2385 9523 3.133691 GCGACATGCCATCTCTTCATTA 58.866 45.455 0.00 0.00 37.76 1.90
2422 9560 7.577979 ACCTGTGTTGTTATATGTTTGTTACG 58.422 34.615 0.00 0.00 0.00 3.18
2433 9571 2.353269 TGTTTGTTACGAACTGGCAGTG 59.647 45.455 22.83 12.33 0.00 3.66
2631 9769 0.786435 AAGGGAAGAAAGGTGGCCAT 59.214 50.000 9.72 0.00 0.00 4.40
2679 9818 9.495572 AGTCGATCAAGATCTTCTTTAGTTTTT 57.504 29.630 4.57 0.00 33.78 1.94
2764 9905 2.261671 CCTGTCACCCGTCCTTCG 59.738 66.667 0.00 0.00 39.52 3.79
2891 10032 0.598065 GTCGAGCAATTGTTTGGGCT 59.402 50.000 7.40 0.00 39.75 5.19
3218 10364 1.337384 ACACCTGCTGACCACTGTGA 61.337 55.000 9.86 0.00 0.00 3.58
3243 10389 4.468765 TGTTGTAAATTGCCCATGGATG 57.531 40.909 15.22 0.00 0.00 3.51
3516 10675 7.358105 GCCTAAAGCATTTCTCGTAAACAAAAC 60.358 37.037 0.00 0.00 40.09 2.43
3697 10887 3.433343 CCCCATGCCATATTTCTATGCA 58.567 45.455 0.00 0.00 34.54 3.96
3714 10904 5.829391 TCTATGCAAACCACATTCATGCTAT 59.171 36.000 0.00 0.00 37.86 2.97
3769 10966 4.991056 TCATTACTTTCGGCTATGAGCATC 59.009 41.667 0.21 0.00 44.75 3.91
3831 11035 1.894466 TGTGTGGCATTGATTCTTGGG 59.106 47.619 0.00 0.00 0.00 4.12
3841 11045 5.413499 CATTGATTCTTGGGTGATTTGACC 58.587 41.667 0.00 0.00 34.96 4.02
3843 11047 5.512942 TGATTCTTGGGTGATTTGACCTA 57.487 39.130 0.00 0.00 36.14 3.08
4128 11336 9.892130 ATAAGCTATTTTAGAGTTTGTGCTAGT 57.108 29.630 0.00 0.00 0.00 2.57
4276 11487 8.625786 TGTTCATCTTTCATGGTCATATATGG 57.374 34.615 12.78 0.00 0.00 2.74
4299 11510 3.883830 ATGTCCAGCTCAAGACTAGTG 57.116 47.619 0.00 0.00 34.02 2.74
4358 11570 1.564622 CCTGTGCGTTTCTGTGACG 59.435 57.895 0.00 0.00 43.04 4.35
4403 11637 8.333908 CCATTCTTGTCTCATTCTTCTTAATCG 58.666 37.037 0.00 0.00 0.00 3.34
4422 11667 4.325028 TCGTGTCTTAAGGTGTAGCAAA 57.675 40.909 1.85 0.00 0.00 3.68
4423 11668 4.304110 TCGTGTCTTAAGGTGTAGCAAAG 58.696 43.478 1.85 0.00 0.00 2.77
4424 11669 4.056050 CGTGTCTTAAGGTGTAGCAAAGT 58.944 43.478 1.85 0.00 0.00 2.66
4426 11671 5.693104 CGTGTCTTAAGGTGTAGCAAAGTTA 59.307 40.000 1.85 0.00 0.00 2.24
4429 11698 9.211485 GTGTCTTAAGGTGTAGCAAAGTTAATA 57.789 33.333 1.85 0.00 0.00 0.98
4467 11736 0.102844 GTGCTGTCCTTTTGCTTGCA 59.897 50.000 0.00 0.00 0.00 4.08
4468 11737 0.822811 TGCTGTCCTTTTGCTTGCAA 59.177 45.000 3.70 3.70 0.00 4.08
4469 11738 1.206610 TGCTGTCCTTTTGCTTGCAAA 59.793 42.857 15.66 15.66 0.00 3.68
4701 11976 6.544564 AGGTGATTTTTCGGACTAAAAACTCA 59.455 34.615 0.00 0.00 40.18 3.41
4803 12078 3.387374 ACTGCTCATCCTTCCATAGTCAG 59.613 47.826 0.00 0.00 0.00 3.51
4829 12104 3.411446 CTCACTTGCCAGGTTATTGACA 58.589 45.455 0.00 0.00 0.00 3.58
4831 12106 2.095059 CACTTGCCAGGTTATTGACAGC 60.095 50.000 0.00 0.00 0.00 4.40
4864 12139 6.616947 TGTGATTGACGGAAATTTGATTACC 58.383 36.000 0.00 0.00 0.00 2.85
4894 12169 3.600388 ACTCGGAACAGTCATGGATTTC 58.400 45.455 0.00 0.00 0.00 2.17
4995 12270 1.063174 GAGCAGAAACGCCTAGCATTG 59.937 52.381 0.00 0.00 0.00 2.82
5035 12310 2.163412 GCGCTGAATGTTTGGTTATGGA 59.837 45.455 0.00 0.00 0.00 3.41
5040 12315 7.521423 GCGCTGAATGTTTGGTTATGGAATATA 60.521 37.037 0.00 0.00 0.00 0.86
5079 12354 6.942532 ATGCTCAAACTTTTAAGTGACTGA 57.057 33.333 0.00 0.27 39.66 3.41
5117 12393 3.243737 GGGAAATTTTCTTCTGTTGCCGT 60.244 43.478 8.93 0.00 0.00 5.68
5278 12554 3.623848 ACGCTCCATGTGTGCTTTA 57.376 47.368 0.00 0.00 38.09 1.85
5282 12558 1.474077 GCTCCATGTGTGCTTTAAGGG 59.526 52.381 0.00 0.00 0.00 3.95
5284 12560 0.171007 CCATGTGTGCTTTAAGGGCG 59.829 55.000 0.00 0.00 0.00 6.13
5286 12562 1.922135 ATGTGTGCTTTAAGGGCGCG 61.922 55.000 0.00 0.00 42.33 6.86
5442 12731 0.443869 ATCTGCTTGCGTACGCTTTG 59.556 50.000 36.99 26.58 42.51 2.77
5458 12747 3.488047 CGCTTTGCTGAATATTGAGGTGG 60.488 47.826 4.01 0.00 0.00 4.61
5462 12751 3.824133 TGCTGAATATTGAGGTGGATGG 58.176 45.455 4.01 0.00 0.00 3.51
5515 12804 3.947612 AGATCCATCCAACTGCTCATT 57.052 42.857 0.00 0.00 0.00 2.57
5535 12824 5.638657 TCATTGTTTGATATTGCTTTGGTGC 59.361 36.000 0.00 0.00 0.00 5.01
5536 12825 4.870123 TGTTTGATATTGCTTTGGTGCT 57.130 36.364 0.00 0.00 0.00 4.40
5567 12856 5.636837 TGCTTATAATTTTGCTTCGTGACC 58.363 37.500 0.00 0.00 0.00 4.02
5568 12857 4.728608 GCTTATAATTTTGCTTCGTGACCG 59.271 41.667 0.00 0.00 0.00 4.79
5578 12867 2.876052 TCGTGACCGAACGAGTTTG 58.124 52.632 4.22 0.00 46.99 2.93
5600 12889 7.503521 TTGTATGTTATGTTTGCTGTCAGAA 57.496 32.000 3.32 0.00 0.00 3.02
5603 12892 8.575589 TGTATGTTATGTTTGCTGTCAGAATTT 58.424 29.630 3.32 0.00 0.00 1.82
5605 12894 6.804677 TGTTATGTTTGCTGTCAGAATTTGT 58.195 32.000 3.32 0.00 0.00 2.83
5607 12896 4.305989 TGTTTGCTGTCAGAATTTGTCC 57.694 40.909 3.32 0.00 0.00 4.02
5609 12898 4.159321 TGTTTGCTGTCAGAATTTGTCCAA 59.841 37.500 3.32 0.00 0.00 3.53
5610 12899 4.572985 TTGCTGTCAGAATTTGTCCAAG 57.427 40.909 3.32 0.00 0.00 3.61
5611 12900 3.819368 TGCTGTCAGAATTTGTCCAAGA 58.181 40.909 3.32 0.00 0.00 3.02
5612 12901 4.206375 TGCTGTCAGAATTTGTCCAAGAA 58.794 39.130 3.32 0.00 0.00 2.52
5613 12902 4.644234 TGCTGTCAGAATTTGTCCAAGAAA 59.356 37.500 3.32 0.00 0.00 2.52
5614 12903 5.126869 TGCTGTCAGAATTTGTCCAAGAAAA 59.873 36.000 3.32 0.00 0.00 2.29
5615 12904 5.460091 GCTGTCAGAATTTGTCCAAGAAAAC 59.540 40.000 3.32 0.00 0.00 2.43
5617 12906 6.329496 TGTCAGAATTTGTCCAAGAAAACAC 58.671 36.000 0.00 0.00 0.00 3.32
5638 12969 4.081531 CACATTTGGTAATGCATCTTGGGT 60.082 41.667 0.00 0.00 44.05 4.51
5640 12971 2.036958 TGGTAATGCATCTTGGGTCG 57.963 50.000 0.00 0.00 0.00 4.79
5641 12972 1.308998 GGTAATGCATCTTGGGTCGG 58.691 55.000 0.00 0.00 0.00 4.79
5642 12973 1.408266 GGTAATGCATCTTGGGTCGGT 60.408 52.381 0.00 0.00 0.00 4.69
5644 12975 1.315257 AATGCATCTTGGGTCGGTGC 61.315 55.000 0.00 0.00 36.39 5.01
5652 12983 0.106918 TTGGGTCGGTGCTTCTGTTT 60.107 50.000 0.00 0.00 0.00 2.83
5653 12984 0.759959 TGGGTCGGTGCTTCTGTTTA 59.240 50.000 0.00 0.00 0.00 2.01
5663 12994 5.291128 CGGTGCTTCTGTTTACTACAATAGG 59.709 44.000 0.00 0.00 36.02 2.57
5680 13019 7.466746 ACAATAGGACATACAACAGCAAAAT 57.533 32.000 0.00 0.00 0.00 1.82
5717 13056 2.534298 CAAGTCTCTGTAGCATGGACG 58.466 52.381 0.00 0.00 32.86 4.79
5718 13057 1.840737 AGTCTCTGTAGCATGGACGT 58.159 50.000 0.00 0.00 32.86 4.34
5719 13058 2.171840 AGTCTCTGTAGCATGGACGTT 58.828 47.619 0.00 0.00 32.86 3.99
5720 13059 2.164624 AGTCTCTGTAGCATGGACGTTC 59.835 50.000 0.00 0.00 32.86 3.95
5721 13060 1.476891 TCTCTGTAGCATGGACGTTCC 59.523 52.381 0.00 0.00 36.96 3.62
5722 13061 0.535335 TCTGTAGCATGGACGTTCCC 59.465 55.000 0.00 0.00 35.03 3.97
5723 13062 0.806102 CTGTAGCATGGACGTTCCCG 60.806 60.000 0.00 0.00 35.03 5.14
5724 13063 1.520787 GTAGCATGGACGTTCCCGG 60.521 63.158 0.00 0.00 35.03 5.73
5725 13064 1.985662 TAGCATGGACGTTCCCGGT 60.986 57.895 0.00 0.00 35.03 5.28
5726 13065 1.546589 TAGCATGGACGTTCCCGGTT 61.547 55.000 0.00 0.00 35.03 4.44
5727 13066 2.396157 GCATGGACGTTCCCGGTTC 61.396 63.158 0.00 0.00 35.03 3.62
5728 13067 1.743995 CATGGACGTTCCCGGTTCC 60.744 63.158 0.00 0.00 35.03 3.62
5729 13068 1.916777 ATGGACGTTCCCGGTTCCT 60.917 57.895 0.00 0.00 35.03 3.36
5730 13069 1.896122 ATGGACGTTCCCGGTTCCTC 61.896 60.000 0.00 0.00 35.03 3.71
5731 13070 2.263852 GACGTTCCCGGTTCCTCC 59.736 66.667 0.00 0.00 38.78 4.30
5732 13071 2.203743 ACGTTCCCGGTTCCTCCT 60.204 61.111 0.00 0.00 38.78 3.69
5733 13072 2.264794 CGTTCCCGGTTCCTCCTG 59.735 66.667 0.00 0.00 0.00 3.86
5734 13073 2.669240 GTTCCCGGTTCCTCCTGG 59.331 66.667 0.00 0.00 41.23 4.45
5735 13074 1.916777 GTTCCCGGTTCCTCCTGGA 60.917 63.158 0.00 0.00 45.73 3.86
5745 13084 3.281727 TTCCTCCTGGAACATATGTGC 57.718 47.619 9.63 7.30 46.57 4.57
5746 13085 1.490490 TCCTCCTGGAACATATGTGCC 59.510 52.381 24.41 24.41 44.41 5.01
5749 13088 0.107214 CCTGGAACATATGTGCCGGT 60.107 55.000 31.89 8.68 46.83 5.28
5750 13089 2.348440 CCTGGAACATATGTGCCGGTG 61.348 57.143 31.89 22.25 46.83 4.94
5751 13090 3.469564 GGAACATATGTGCCGGTGA 57.530 52.632 17.46 0.00 33.24 4.02
5752 13091 1.967319 GGAACATATGTGCCGGTGAT 58.033 50.000 17.46 0.00 33.24 3.06
5753 13092 1.873591 GGAACATATGTGCCGGTGATC 59.126 52.381 17.46 4.34 33.24 2.92
5754 13093 2.485479 GGAACATATGTGCCGGTGATCT 60.485 50.000 17.46 0.00 33.24 2.75
5755 13094 2.533266 ACATATGTGCCGGTGATCTC 57.467 50.000 7.78 0.00 0.00 2.75
5756 13095 2.042464 ACATATGTGCCGGTGATCTCT 58.958 47.619 7.78 0.00 0.00 3.10
5757 13096 2.036475 ACATATGTGCCGGTGATCTCTC 59.964 50.000 7.78 0.00 0.00 3.20
5758 13097 2.073252 TATGTGCCGGTGATCTCTCT 57.927 50.000 1.90 0.00 0.00 3.10
5759 13098 1.198713 ATGTGCCGGTGATCTCTCTT 58.801 50.000 1.90 0.00 0.00 2.85
5760 13099 0.247460 TGTGCCGGTGATCTCTCTTG 59.753 55.000 1.90 0.00 0.00 3.02
5761 13100 0.532573 GTGCCGGTGATCTCTCTTGA 59.467 55.000 1.90 0.00 0.00 3.02
5762 13101 0.820226 TGCCGGTGATCTCTCTTGAG 59.180 55.000 1.90 0.00 41.51 3.02
5763 13102 0.529555 GCCGGTGATCTCTCTTGAGC 60.530 60.000 1.90 0.00 40.03 4.26
5764 13103 1.110442 CCGGTGATCTCTCTTGAGCT 58.890 55.000 0.00 0.00 40.03 4.09
5765 13104 1.202394 CCGGTGATCTCTCTTGAGCTG 60.202 57.143 0.00 0.00 40.03 4.24
5766 13105 1.802136 CGGTGATCTCTCTTGAGCTGC 60.802 57.143 0.00 0.00 40.03 5.25
5767 13106 1.558741 GTGATCTCTCTTGAGCTGCG 58.441 55.000 0.00 0.00 40.03 5.18
5768 13107 1.135141 GTGATCTCTCTTGAGCTGCGT 60.135 52.381 0.00 0.00 40.03 5.24
5769 13108 1.133982 TGATCTCTCTTGAGCTGCGTC 59.866 52.381 0.00 0.00 40.03 5.19
5770 13109 1.133982 GATCTCTCTTGAGCTGCGTCA 59.866 52.381 0.00 0.00 40.03 4.35
5771 13110 0.242286 TCTCTCTTGAGCTGCGTCAC 59.758 55.000 0.00 0.00 40.03 3.67
5772 13111 1.069924 CTCTCTTGAGCTGCGTCACG 61.070 60.000 0.00 0.00 33.12 4.35
5773 13112 1.372251 CTCTTGAGCTGCGTCACGT 60.372 57.895 0.00 0.00 0.00 4.49
5774 13113 0.941463 CTCTTGAGCTGCGTCACGTT 60.941 55.000 0.00 0.00 0.00 3.99
5775 13114 0.529773 TCTTGAGCTGCGTCACGTTT 60.530 50.000 0.00 0.00 0.00 3.60
5776 13115 0.111089 CTTGAGCTGCGTCACGTTTC 60.111 55.000 0.00 0.00 0.00 2.78
5777 13116 0.808060 TTGAGCTGCGTCACGTTTCA 60.808 50.000 0.00 0.00 0.00 2.69
5778 13117 0.599991 TGAGCTGCGTCACGTTTCAT 60.600 50.000 0.00 0.00 0.00 2.57
5779 13118 0.179240 GAGCTGCGTCACGTTTCATG 60.179 55.000 0.00 0.00 0.00 3.07
5780 13119 0.880278 AGCTGCGTCACGTTTCATGT 60.880 50.000 0.00 0.00 0.00 3.21
5781 13120 0.722469 GCTGCGTCACGTTTCATGTG 60.722 55.000 0.00 0.00 36.48 3.21
5782 13121 0.581529 CTGCGTCACGTTTCATGTGT 59.418 50.000 0.00 0.00 36.53 3.72
5783 13122 1.003972 CTGCGTCACGTTTCATGTGTT 60.004 47.619 0.00 0.00 36.53 3.32
5784 13123 1.398739 TGCGTCACGTTTCATGTGTTT 59.601 42.857 0.00 0.00 36.53 2.83
5785 13124 1.772966 GCGTCACGTTTCATGTGTTTG 59.227 47.619 0.00 0.00 36.53 2.93
5786 13125 2.537931 GCGTCACGTTTCATGTGTTTGA 60.538 45.455 0.00 0.00 36.53 2.69
5787 13126 3.848191 GCGTCACGTTTCATGTGTTTGAT 60.848 43.478 0.00 0.00 36.53 2.57
5788 13127 3.658988 CGTCACGTTTCATGTGTTTGATG 59.341 43.478 0.00 0.00 36.53 3.07
5789 13128 3.974401 GTCACGTTTCATGTGTTTGATGG 59.026 43.478 0.00 0.00 36.53 3.51
5790 13129 2.725723 CACGTTTCATGTGTTTGATGGC 59.274 45.455 0.00 0.00 30.72 4.40
5791 13130 2.360483 ACGTTTCATGTGTTTGATGGCA 59.640 40.909 0.00 0.00 0.00 4.92
5792 13131 3.005684 ACGTTTCATGTGTTTGATGGCAT 59.994 39.130 0.00 0.00 0.00 4.40
5793 13132 4.217334 ACGTTTCATGTGTTTGATGGCATA 59.783 37.500 0.00 0.00 0.00 3.14
5794 13133 4.794762 CGTTTCATGTGTTTGATGGCATAG 59.205 41.667 0.00 0.00 0.00 2.23
5795 13134 5.619757 CGTTTCATGTGTTTGATGGCATAGT 60.620 40.000 0.00 0.00 0.00 2.12
5796 13135 5.565592 TTCATGTGTTTGATGGCATAGTC 57.434 39.130 0.00 0.00 0.00 2.59
5797 13136 4.587891 TCATGTGTTTGATGGCATAGTCA 58.412 39.130 0.00 0.00 0.00 3.41
5798 13137 5.195185 TCATGTGTTTGATGGCATAGTCAT 58.805 37.500 0.00 0.00 0.00 3.06
5799 13138 5.653330 TCATGTGTTTGATGGCATAGTCATT 59.347 36.000 0.00 0.00 0.00 2.57
5800 13139 5.565592 TGTGTTTGATGGCATAGTCATTC 57.434 39.130 0.00 0.00 0.00 2.67
5801 13140 4.398988 TGTGTTTGATGGCATAGTCATTCC 59.601 41.667 0.00 0.00 0.00 3.01
5802 13141 4.398988 GTGTTTGATGGCATAGTCATTCCA 59.601 41.667 0.00 0.00 0.00 3.53
5803 13142 5.068198 GTGTTTGATGGCATAGTCATTCCAT 59.932 40.000 0.00 0.00 41.63 3.41
5804 13143 6.262944 GTGTTTGATGGCATAGTCATTCCATA 59.737 38.462 0.00 0.00 39.25 2.74
5805 13144 7.005902 TGTTTGATGGCATAGTCATTCCATAT 58.994 34.615 0.00 0.00 39.25 1.78
5806 13145 7.506599 TGTTTGATGGCATAGTCATTCCATATT 59.493 33.333 0.00 0.00 39.25 1.28
5807 13146 7.692460 TTGATGGCATAGTCATTCCATATTC 57.308 36.000 0.00 0.00 39.25 1.75
5808 13147 7.024345 TGATGGCATAGTCATTCCATATTCT 57.976 36.000 0.00 0.00 39.25 2.40
5809 13148 7.464273 TGATGGCATAGTCATTCCATATTCTT 58.536 34.615 0.00 0.00 39.25 2.52
5810 13149 7.946219 TGATGGCATAGTCATTCCATATTCTTT 59.054 33.333 0.00 0.00 39.25 2.52
5811 13150 7.750229 TGGCATAGTCATTCCATATTCTTTC 57.250 36.000 0.00 0.00 0.00 2.62
5812 13151 7.289310 TGGCATAGTCATTCCATATTCTTTCA 58.711 34.615 0.00 0.00 0.00 2.69
5813 13152 7.946219 TGGCATAGTCATTCCATATTCTTTCAT 59.054 33.333 0.00 0.00 0.00 2.57
5814 13153 8.457261 GGCATAGTCATTCCATATTCTTTCATC 58.543 37.037 0.00 0.00 0.00 2.92
5815 13154 8.457261 GCATAGTCATTCCATATTCTTTCATCC 58.543 37.037 0.00 0.00 0.00 3.51
5816 13155 8.954350 CATAGTCATTCCATATTCTTTCATCCC 58.046 37.037 0.00 0.00 0.00 3.85
5817 13156 6.914665 AGTCATTCCATATTCTTTCATCCCA 58.085 36.000 0.00 0.00 0.00 4.37
5818 13157 7.356680 AGTCATTCCATATTCTTTCATCCCAA 58.643 34.615 0.00 0.00 0.00 4.12
5819 13158 7.840716 AGTCATTCCATATTCTTTCATCCCAAA 59.159 33.333 0.00 0.00 0.00 3.28
5820 13159 8.139989 GTCATTCCATATTCTTTCATCCCAAAG 58.860 37.037 0.00 0.00 35.06 2.77
5821 13160 6.469782 TTCCATATTCTTTCATCCCAAAGC 57.530 37.500 0.00 0.00 33.94 3.51
5822 13161 5.517924 TCCATATTCTTTCATCCCAAAGCA 58.482 37.500 0.00 0.00 33.94 3.91
5823 13162 6.138263 TCCATATTCTTTCATCCCAAAGCAT 58.862 36.000 0.00 0.00 33.94 3.79
5824 13163 7.296856 TCCATATTCTTTCATCCCAAAGCATA 58.703 34.615 0.00 0.00 33.94 3.14
5825 13164 7.951806 TCCATATTCTTTCATCCCAAAGCATAT 59.048 33.333 0.00 0.00 34.46 1.78
5826 13165 8.591072 CCATATTCTTTCATCCCAAAGCATATT 58.409 33.333 0.00 0.00 32.89 1.28
5827 13166 9.991906 CATATTCTTTCATCCCAAAGCATATTT 57.008 29.630 0.00 0.00 32.89 1.40
5829 13168 8.726870 ATTCTTTCATCCCAAAGCATATTTTG 57.273 30.769 0.00 0.00 37.70 2.44
5838 13177 5.404466 CAAAGCATATTTTGGGGAGTTCA 57.596 39.130 0.00 0.00 35.03 3.18
5839 13178 5.170748 CAAAGCATATTTTGGGGAGTTCAC 58.829 41.667 0.00 0.00 35.03 3.18
5840 13179 4.322057 AGCATATTTTGGGGAGTTCACT 57.678 40.909 0.00 0.00 0.00 3.41
5841 13180 4.677182 AGCATATTTTGGGGAGTTCACTT 58.323 39.130 0.00 0.00 0.00 3.16
5842 13181 4.463891 AGCATATTTTGGGGAGTTCACTTG 59.536 41.667 0.00 0.00 0.00 3.16
5843 13182 4.381932 GCATATTTTGGGGAGTTCACTTGG 60.382 45.833 0.00 0.00 0.00 3.61
5844 13183 2.838637 TTTTGGGGAGTTCACTTGGT 57.161 45.000 0.00 0.00 0.00 3.67
5845 13184 2.065899 TTTGGGGAGTTCACTTGGTG 57.934 50.000 0.00 0.00 34.45 4.17
5846 13185 0.467290 TTGGGGAGTTCACTTGGTGC 60.467 55.000 0.00 0.00 32.98 5.01
5847 13186 1.150536 GGGGAGTTCACTTGGTGCA 59.849 57.895 0.00 0.00 32.98 4.57
5848 13187 0.890996 GGGGAGTTCACTTGGTGCAG 60.891 60.000 0.00 0.00 32.98 4.41
5849 13188 0.108585 GGGAGTTCACTTGGTGCAGA 59.891 55.000 0.00 0.00 32.98 4.26
5850 13189 1.476833 GGGAGTTCACTTGGTGCAGAA 60.477 52.381 0.00 0.00 32.98 3.02
5851 13190 1.876156 GGAGTTCACTTGGTGCAGAAG 59.124 52.381 4.21 4.21 32.98 2.85
5852 13191 2.565841 GAGTTCACTTGGTGCAGAAGT 58.434 47.619 5.39 5.39 33.82 3.01
5853 13192 2.945668 GAGTTCACTTGGTGCAGAAGTT 59.054 45.455 8.09 0.00 31.05 2.66
5854 13193 3.356290 AGTTCACTTGGTGCAGAAGTTT 58.644 40.909 8.09 0.00 31.05 2.66
5855 13194 3.129287 AGTTCACTTGGTGCAGAAGTTTG 59.871 43.478 8.09 0.43 31.05 2.93
5856 13195 2.722094 TCACTTGGTGCAGAAGTTTGT 58.278 42.857 8.09 0.00 31.05 2.83
5857 13196 3.879998 TCACTTGGTGCAGAAGTTTGTA 58.120 40.909 8.09 0.00 31.05 2.41
5858 13197 4.265893 TCACTTGGTGCAGAAGTTTGTAA 58.734 39.130 8.09 0.00 31.05 2.41
5859 13198 4.887071 TCACTTGGTGCAGAAGTTTGTAAT 59.113 37.500 8.09 0.00 31.05 1.89
5860 13199 5.359576 TCACTTGGTGCAGAAGTTTGTAATT 59.640 36.000 8.09 0.00 31.05 1.40
5861 13200 6.042143 CACTTGGTGCAGAAGTTTGTAATTT 58.958 36.000 8.09 0.00 31.05 1.82
5862 13201 6.019640 CACTTGGTGCAGAAGTTTGTAATTTG 60.020 38.462 8.09 0.00 31.05 2.32
5863 13202 4.367450 TGGTGCAGAAGTTTGTAATTTGC 58.633 39.130 0.00 0.00 0.00 3.68
5864 13203 4.142071 TGGTGCAGAAGTTTGTAATTTGCA 60.142 37.500 0.00 0.00 37.70 4.08
5865 13204 4.808364 GGTGCAGAAGTTTGTAATTTGCAA 59.192 37.500 0.00 0.00 41.15 4.08
5866 13205 5.050837 GGTGCAGAAGTTTGTAATTTGCAAG 60.051 40.000 0.00 0.00 41.15 4.01
5867 13206 5.049167 TGCAGAAGTTTGTAATTTGCAAGG 58.951 37.500 0.00 0.00 37.17 3.61
5868 13207 5.049828 GCAGAAGTTTGTAATTTGCAAGGT 58.950 37.500 0.00 0.00 0.00 3.50
5869 13208 6.183360 TGCAGAAGTTTGTAATTTGCAAGGTA 60.183 34.615 0.00 0.00 37.17 3.08
5870 13209 6.143919 GCAGAAGTTTGTAATTTGCAAGGTAC 59.856 38.462 12.40 12.40 0.00 3.34
5887 13226 5.306114 AGGTACTTACAAGGCTTTTCTGT 57.694 39.130 0.00 0.00 27.25 3.41
5888 13227 5.306394 AGGTACTTACAAGGCTTTTCTGTC 58.694 41.667 0.00 0.00 27.25 3.51
5889 13228 5.071923 AGGTACTTACAAGGCTTTTCTGTCT 59.928 40.000 0.00 0.00 27.25 3.41
5890 13229 5.179555 GGTACTTACAAGGCTTTTCTGTCTG 59.820 44.000 0.00 0.00 0.00 3.51
5891 13230 5.036117 ACTTACAAGGCTTTTCTGTCTGA 57.964 39.130 0.00 0.00 0.00 3.27
5892 13231 5.625150 ACTTACAAGGCTTTTCTGTCTGAT 58.375 37.500 0.00 0.00 0.00 2.90
5893 13232 6.769512 ACTTACAAGGCTTTTCTGTCTGATA 58.230 36.000 0.00 0.00 0.00 2.15
5894 13233 6.876257 ACTTACAAGGCTTTTCTGTCTGATAG 59.124 38.462 0.00 0.00 0.00 2.08
5895 13234 5.489792 ACAAGGCTTTTCTGTCTGATAGA 57.510 39.130 0.00 0.00 0.00 1.98
5896 13235 6.059787 ACAAGGCTTTTCTGTCTGATAGAT 57.940 37.500 4.90 0.00 0.00 1.98
5897 13236 6.112058 ACAAGGCTTTTCTGTCTGATAGATC 58.888 40.000 4.90 0.00 0.00 2.75
5898 13237 5.289083 AGGCTTTTCTGTCTGATAGATCC 57.711 43.478 4.90 5.08 0.00 3.36
5899 13238 4.718774 AGGCTTTTCTGTCTGATAGATCCA 59.281 41.667 4.90 0.00 0.00 3.41
5900 13239 5.190528 AGGCTTTTCTGTCTGATAGATCCAA 59.809 40.000 4.90 0.00 0.00 3.53
5901 13240 5.295540 GGCTTTTCTGTCTGATAGATCCAAC 59.704 44.000 4.90 0.00 0.00 3.77
5902 13241 6.112058 GCTTTTCTGTCTGATAGATCCAACT 58.888 40.000 4.90 0.00 0.00 3.16
5903 13242 6.036953 GCTTTTCTGTCTGATAGATCCAACTG 59.963 42.308 4.90 0.00 0.00 3.16
5904 13243 4.662468 TCTGTCTGATAGATCCAACTGC 57.338 45.455 0.00 0.00 0.00 4.40
5905 13244 4.285020 TCTGTCTGATAGATCCAACTGCT 58.715 43.478 0.00 0.00 0.00 4.24
5906 13245 5.449553 TCTGTCTGATAGATCCAACTGCTA 58.550 41.667 0.00 0.00 0.00 3.49
5907 13246 5.893824 TCTGTCTGATAGATCCAACTGCTAA 59.106 40.000 0.00 0.00 0.00 3.09
5908 13247 6.381133 TCTGTCTGATAGATCCAACTGCTAAA 59.619 38.462 0.00 0.00 0.00 1.85
5909 13248 7.070447 TCTGTCTGATAGATCCAACTGCTAAAT 59.930 37.037 0.00 0.00 0.00 1.40
5910 13249 6.988580 TGTCTGATAGATCCAACTGCTAAATG 59.011 38.462 0.00 0.00 0.00 2.32
5911 13250 7.147672 TGTCTGATAGATCCAACTGCTAAATGA 60.148 37.037 0.00 0.00 0.00 2.57
5912 13251 7.384660 GTCTGATAGATCCAACTGCTAAATGAG 59.615 40.741 0.00 0.00 0.00 2.90
5913 13252 6.528321 TGATAGATCCAACTGCTAAATGAGG 58.472 40.000 0.00 0.00 0.00 3.86
5914 13253 3.549794 AGATCCAACTGCTAAATGAGGC 58.450 45.455 0.00 0.00 0.00 4.70
5915 13254 2.877097 TCCAACTGCTAAATGAGGCA 57.123 45.000 0.00 0.00 36.94 4.75
5916 13255 3.153369 TCCAACTGCTAAATGAGGCAA 57.847 42.857 0.00 0.00 38.02 4.52
5917 13256 2.819608 TCCAACTGCTAAATGAGGCAAC 59.180 45.455 0.00 0.00 38.02 4.17
5918 13257 2.094545 CCAACTGCTAAATGAGGCAACC 60.095 50.000 0.00 0.00 38.02 3.77
5919 13258 1.839424 ACTGCTAAATGAGGCAACCC 58.161 50.000 0.00 0.00 38.02 4.11
5920 13259 0.734889 CTGCTAAATGAGGCAACCCG 59.265 55.000 0.00 0.00 38.02 5.28
5921 13260 0.679640 TGCTAAATGAGGCAACCCGG 60.680 55.000 0.00 0.00 35.40 5.73
5922 13261 0.679960 GCTAAATGAGGCAACCCGGT 60.680 55.000 0.00 0.00 35.76 5.28
5923 13262 1.834188 CTAAATGAGGCAACCCGGTT 58.166 50.000 0.00 0.00 35.76 4.44
5924 13263 2.167662 CTAAATGAGGCAACCCGGTTT 58.832 47.619 0.00 0.00 35.76 3.27
5925 13264 1.419381 AAATGAGGCAACCCGGTTTT 58.581 45.000 0.00 0.00 35.76 2.43
5926 13265 1.419381 AATGAGGCAACCCGGTTTTT 58.581 45.000 0.00 0.00 35.76 1.94
5940 13279 4.629442 TTTTTCCCCATTGCCGGT 57.371 50.000 1.90 0.00 0.00 5.28
5941 13280 3.768008 TTTTTCCCCATTGCCGGTA 57.232 47.368 1.90 0.00 0.00 4.02
5942 13281 1.551452 TTTTTCCCCATTGCCGGTAG 58.449 50.000 1.90 0.00 0.00 3.18
5943 13282 0.968393 TTTTCCCCATTGCCGGTAGC 60.968 55.000 1.90 0.00 44.14 3.58
5953 13292 2.906047 GCCGGTAGCATGTGAGATC 58.094 57.895 1.90 0.00 42.97 2.75
5954 13293 0.104855 GCCGGTAGCATGTGAGATCA 59.895 55.000 1.90 0.00 42.97 2.92
5955 13294 1.871408 GCCGGTAGCATGTGAGATCAG 60.871 57.143 1.90 0.00 42.97 2.90
5956 13295 1.495878 CGGTAGCATGTGAGATCAGC 58.504 55.000 0.00 0.00 0.00 4.26
5957 13296 1.068281 CGGTAGCATGTGAGATCAGCT 59.932 52.381 0.00 0.00 39.22 4.24
5958 13297 2.753296 GGTAGCATGTGAGATCAGCTC 58.247 52.381 0.00 0.00 44.21 4.09
5966 13305 3.198187 GAGATCAGCTCAGCGGATG 57.802 57.895 17.78 0.00 42.84 3.51
5967 13306 0.672889 GAGATCAGCTCAGCGGATGA 59.327 55.000 17.78 2.91 42.84 2.92
5981 13320 4.465040 GCGGATGAGCTAAAATCAAGAG 57.535 45.455 0.00 0.00 0.00 2.85
5982 13321 4.122776 GCGGATGAGCTAAAATCAAGAGA 58.877 43.478 0.00 0.00 0.00 3.10
5983 13322 4.210955 GCGGATGAGCTAAAATCAAGAGAG 59.789 45.833 0.00 0.00 0.00 3.20
5984 13323 5.355596 CGGATGAGCTAAAATCAAGAGAGT 58.644 41.667 0.00 0.00 0.00 3.24
5985 13324 5.814705 CGGATGAGCTAAAATCAAGAGAGTT 59.185 40.000 0.00 0.00 32.66 3.01
5986 13325 6.314896 CGGATGAGCTAAAATCAAGAGAGTTT 59.685 38.462 0.00 0.00 43.63 2.66
5987 13326 7.492669 CGGATGAGCTAAAATCAAGAGAGTTTA 59.507 37.037 0.00 0.00 41.69 2.01
5988 13327 9.336171 GGATGAGCTAAAATCAAGAGAGTTTAT 57.664 33.333 0.00 0.00 41.67 1.40
5990 13329 9.678260 ATGAGCTAAAATCAAGAGAGTTTATGT 57.322 29.630 0.00 0.00 41.67 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.965363 ATGCGTTTGGGCCCTAGTTG 60.965 55.000 25.70 10.30 0.00 3.16
3 4 1.097547 CAGATGCGTTTGGGCCCTAG 61.098 60.000 25.70 12.54 0.00 3.02
5 6 2.361610 CAGATGCGTTTGGGCCCT 60.362 61.111 25.70 0.00 0.00 5.19
6 7 3.451894 CCAGATGCGTTTGGGCCC 61.452 66.667 17.59 17.59 0.00 5.80
9 10 1.606885 AATGGCCAGATGCGTTTGGG 61.607 55.000 13.05 2.61 42.61 4.12
12 13 1.067635 GTTCAATGGCCAGATGCGTTT 60.068 47.619 13.05 0.00 42.61 3.60
14 15 0.608856 TGTTCAATGGCCAGATGCGT 60.609 50.000 13.05 0.00 42.61 5.24
16 17 2.482490 GGAATGTTCAATGGCCAGATGC 60.482 50.000 13.05 1.90 40.16 3.91
17 18 2.761767 TGGAATGTTCAATGGCCAGATG 59.238 45.455 13.05 13.50 0.00 2.90
23 24 3.328505 CCTTGTTGGAATGTTCAATGGC 58.671 45.455 0.00 0.00 38.35 4.40
24 25 3.324556 ACCCTTGTTGGAATGTTCAATGG 59.675 43.478 0.00 0.00 38.35 3.16
26 27 6.739331 TTAACCCTTGTTGGAATGTTCAAT 57.261 33.333 0.00 0.00 38.35 2.57
27 28 6.739331 ATTAACCCTTGTTGGAATGTTCAA 57.261 33.333 0.00 0.00 38.35 2.69
28 29 6.239458 GGAATTAACCCTTGTTGGAATGTTCA 60.239 38.462 0.00 0.00 38.35 3.18
29 30 6.163476 GGAATTAACCCTTGTTGGAATGTTC 58.837 40.000 0.00 0.00 38.35 3.18
30 31 5.012664 GGGAATTAACCCTTGTTGGAATGTT 59.987 40.000 0.00 0.00 45.90 2.71
32 33 5.084818 GGGAATTAACCCTTGTTGGAATG 57.915 43.478 0.00 0.00 45.90 2.67
119 123 3.366374 GCTGTTTGTTATTGGGCTGACTC 60.366 47.826 0.00 0.00 0.00 3.36
128 132 7.840489 ACTCAAATTTTCGCTGTTTGTTATTG 58.160 30.769 0.00 0.00 35.09 1.90
129 133 8.419076 AACTCAAATTTTCGCTGTTTGTTATT 57.581 26.923 0.00 0.00 35.09 1.40
158 162 2.991434 CGAGTCCTTTCTTCTCGTCA 57.009 50.000 0.00 0.00 43.69 4.35
186 193 0.248784 GGATAAGGTTCGACGGACGG 60.249 60.000 0.00 0.00 42.82 4.79
187 194 0.452987 TGGATAAGGTTCGACGGACG 59.547 55.000 0.00 0.00 44.09 4.79
188 195 1.801765 GCTGGATAAGGTTCGACGGAC 60.802 57.143 0.00 0.00 0.00 4.79
189 196 0.458669 GCTGGATAAGGTTCGACGGA 59.541 55.000 0.00 0.00 0.00 4.69
370 397 4.803426 CGTCGGTCAGCCTCAGCC 62.803 72.222 0.00 0.00 41.25 4.85
371 398 3.691744 CTCGTCGGTCAGCCTCAGC 62.692 68.421 0.00 0.00 40.32 4.26
372 399 2.487428 CTCGTCGGTCAGCCTCAG 59.513 66.667 0.00 0.00 0.00 3.35
373 400 3.062466 CCTCGTCGGTCAGCCTCA 61.062 66.667 0.00 0.00 0.00 3.86
374 401 4.500116 GCCTCGTCGGTCAGCCTC 62.500 72.222 0.00 0.00 34.25 4.70
407 441 2.599281 TTCTGGCTGGACGGACGA 60.599 61.111 0.00 0.00 0.00 4.20
411 445 2.125912 CGAGTTCTGGCTGGACGG 60.126 66.667 0.00 0.00 0.00 4.79
421 455 2.282040 ACGTCGGGGTCGAGTTCT 60.282 61.111 0.00 0.00 46.91 3.01
424 458 3.054503 CAGACGTCGGGGTCGAGT 61.055 66.667 10.46 0.00 46.91 4.18
458 492 2.335712 CCTTTGGCTGAGGCGGAAC 61.336 63.158 0.35 0.00 39.81 3.62
510 544 7.805071 CACATTTTCTGTAGAACTTAAGCTTGG 59.195 37.037 9.86 4.42 35.91 3.61
512 546 7.522236 GCCACATTTTCTGTAGAACTTAAGCTT 60.522 37.037 3.48 3.48 35.91 3.74
529 564 2.722094 TCTATCAAGCGGCCACATTTT 58.278 42.857 2.24 0.00 0.00 1.82
569 625 3.219281 ACACTACGGGCAACAAGAATTT 58.781 40.909 0.00 0.00 39.74 1.82
576 632 5.583061 CAGAATTATTACACTACGGGCAACA 59.417 40.000 0.00 0.00 39.74 3.33
704 771 4.021544 GCATACAAAGGACCATGGTTTGAA 60.022 41.667 27.07 9.07 35.55 2.69
713 780 4.832266 AGTTTCAATGCATACAAAGGACCA 59.168 37.500 0.00 0.00 0.00 4.02
748 815 3.904339 AGATCACAGATATACACCCACCC 59.096 47.826 0.00 0.00 0.00 4.61
749 816 6.665680 AGATAGATCACAGATATACACCCACC 59.334 42.308 0.00 0.00 0.00 4.61
750 817 7.710676 AGATAGATCACAGATATACACCCAC 57.289 40.000 0.00 0.00 0.00 4.61
756 823 9.743057 GGCATTGTAGATAGATCACAGATATAC 57.257 37.037 0.00 0.00 0.00 1.47
758 825 8.606754 AGGCATTGTAGATAGATCACAGATAT 57.393 34.615 0.00 0.00 0.00 1.63
779 846 9.330063 CAGATTTGATAACTAAAGTATGAGGCA 57.670 33.333 0.00 0.00 0.00 4.75
927 1124 1.666553 CCGCCGTAAAGCACACAGA 60.667 57.895 0.00 0.00 0.00 3.41
929 1126 0.814410 TTTCCGCCGTAAAGCACACA 60.814 50.000 0.00 0.00 0.00 3.72
958 1156 6.870769 AGATGAACAAAATCCAGCCAATAAG 58.129 36.000 0.00 0.00 0.00 1.73
1036 1234 2.343475 ATCGCCATGGCAGTAAGGGG 62.343 60.000 34.93 16.84 42.06 4.79
1073 1274 2.613506 GCGTAGTGGGTTGGTGCAC 61.614 63.158 8.80 8.80 0.00 4.57
1237 1443 7.656137 TCACAGTACAAAGTAGAAATTCAGGTC 59.344 37.037 0.00 0.00 0.00 3.85
1250 1456 5.354234 CACAAGAACCTTCACAGTACAAAGT 59.646 40.000 0.00 0.00 0.00 2.66
1585 1857 2.483013 GGATACCAGCACAGCGATGTTA 60.483 50.000 2.11 0.00 0.00 2.41
1608 1880 6.443527 AGGATAGTGGTATTGGCCAAAATTTT 59.556 34.615 24.71 8.17 40.68 1.82
1622 1901 4.730966 CCAGCTAGAAGAGGATAGTGGTA 58.269 47.826 0.00 0.00 0.00 3.25
1636 1917 2.372276 TGGATGGGGCCAGCTAGA 59.628 61.111 4.39 0.00 33.10 2.43
1664 4662 7.575155 CGTTATGTTGGAGTTCTAAGACTCTGA 60.575 40.741 5.17 0.00 44.32 3.27
1724 4724 0.537143 AAAGGGTCGCTGCATTGACA 60.537 50.000 17.23 0.00 36.83 3.58
1796 5433 7.202102 GGTTGGATAATGTCAGGTCCTATTACT 60.202 40.741 0.00 0.00 0.00 2.24
1807 5444 8.621286 GGTAAGTTTATGGTTGGATAATGTCAG 58.379 37.037 0.00 0.00 0.00 3.51
1828 7327 2.170817 GGGCTAGAAAGGGACTGGTAAG 59.829 54.545 0.00 0.00 40.86 2.34
1982 7483 5.494390 ACAGTTCGTTCCCTTTACCTTAT 57.506 39.130 0.00 0.00 0.00 1.73
2031 7532 1.274728 AGGAGCATGATAGGCGTCATC 59.725 52.381 0.00 0.00 36.72 2.92
2038 7539 3.565764 TTGTTGGAGGAGCATGATAGG 57.434 47.619 0.00 0.00 0.00 2.57
2095 7687 1.398692 TCACTCAGGGTTTTGGTTGC 58.601 50.000 0.00 0.00 0.00 4.17
2143 7737 4.329256 GCTCGGTTGTACAATCTTACCTTC 59.671 45.833 16.56 0.00 0.00 3.46
2307 9444 6.509418 ACAGTTTGAAAGTTTGCAGAGTAA 57.491 33.333 0.00 0.00 0.00 2.24
2308 9445 6.509418 AACAGTTTGAAAGTTTGCAGAGTA 57.491 33.333 0.00 0.00 0.00 2.59
2309 9446 5.391312 AACAGTTTGAAAGTTTGCAGAGT 57.609 34.783 0.00 0.00 0.00 3.24
2310 9447 5.863397 TGAAACAGTTTGAAAGTTTGCAGAG 59.137 36.000 2.34 0.00 35.77 3.35
2311 9448 5.777802 TGAAACAGTTTGAAAGTTTGCAGA 58.222 33.333 2.34 0.00 35.77 4.26
2382 9520 5.489792 ACACAGGTCAAGTGAGTGATAAT 57.510 39.130 6.27 0.00 40.16 1.28
2385 9523 3.118261 ACAACACAGGTCAAGTGAGTGAT 60.118 43.478 6.27 0.00 40.16 3.06
2422 9560 9.331282 AGATTAGATTTTATACACTGCCAGTTC 57.669 33.333 0.00 0.00 0.00 3.01
2508 9646 4.928615 CCATAATTCTCTGAAGGATCTCGC 59.071 45.833 0.00 0.00 0.00 5.03
2686 9825 4.712122 AAGAAGATCTCGAGGTGTTCTC 57.288 45.455 31.41 11.83 39.10 2.87
2687 9826 5.712917 ACTAAAGAAGATCTCGAGGTGTTCT 59.287 40.000 27.49 27.49 0.00 3.01
2688 9827 5.956642 ACTAAAGAAGATCTCGAGGTGTTC 58.043 41.667 24.16 24.16 0.00 3.18
2689 9828 5.986501 ACTAAAGAAGATCTCGAGGTGTT 57.013 39.130 7.97 7.97 0.00 3.32
2690 9829 5.477291 TCAACTAAAGAAGATCTCGAGGTGT 59.523 40.000 13.56 0.00 31.44 4.16
2691 9830 5.802956 GTCAACTAAAGAAGATCTCGAGGTG 59.197 44.000 13.56 0.00 30.97 4.00
2692 9831 5.477291 TGTCAACTAAAGAAGATCTCGAGGT 59.523 40.000 13.56 4.76 0.00 3.85
2693 9832 5.955488 TGTCAACTAAAGAAGATCTCGAGG 58.045 41.667 13.56 0.00 0.00 4.63
2694 9833 7.463913 GCAATGTCAACTAAAGAAGATCTCGAG 60.464 40.741 5.93 5.93 0.00 4.04
2695 9834 6.311445 GCAATGTCAACTAAAGAAGATCTCGA 59.689 38.462 0.00 0.00 0.00 4.04
2696 9835 6.091305 TGCAATGTCAACTAAAGAAGATCTCG 59.909 38.462 0.00 0.00 0.00 4.04
2697 9836 7.239972 GTGCAATGTCAACTAAAGAAGATCTC 58.760 38.462 0.00 0.00 0.00 2.75
2698 9837 6.150140 GGTGCAATGTCAACTAAAGAAGATCT 59.850 38.462 0.00 0.00 0.00 2.75
2699 9838 6.317857 GGTGCAATGTCAACTAAAGAAGATC 58.682 40.000 0.00 0.00 0.00 2.75
2700 9839 5.183904 GGGTGCAATGTCAACTAAAGAAGAT 59.816 40.000 0.00 0.00 0.00 2.40
2701 9840 4.518970 GGGTGCAATGTCAACTAAAGAAGA 59.481 41.667 0.00 0.00 0.00 2.87
2764 9905 4.099573 TCGGAATGTTGGAAGATCTCCTAC 59.900 45.833 14.32 14.32 46.71 3.18
2891 10032 1.872952 CCACATCTTCAACAGCGTGAA 59.127 47.619 0.00 1.43 36.15 3.18
3218 10364 4.285517 TCCATGGGCAATTTACAACAATGT 59.714 37.500 13.02 0.00 43.74 2.71
3243 10389 5.055144 TCAAGAGCAGCATCAATCTATGAC 58.945 41.667 0.00 0.00 41.93 3.06
3511 10669 0.390860 TGTTGCCCAATCCCGTTTTG 59.609 50.000 0.00 0.00 0.00 2.44
3516 10675 2.359354 TCGTGTTGCCCAATCCCG 60.359 61.111 0.00 0.00 0.00 5.14
3635 10821 0.035458 GCGTATGAGGGGGAATCAGG 59.965 60.000 0.00 0.00 0.00 3.86
3697 10887 5.981088 TCACAATAGCATGAATGTGGTTT 57.019 34.783 15.76 0.00 42.56 3.27
3769 10966 4.321675 CCTTTCCTAACATTTTCCCCGTTG 60.322 45.833 0.00 0.00 0.00 4.10
3772 10976 3.192633 CACCTTTCCTAACATTTTCCCCG 59.807 47.826 0.00 0.00 0.00 5.73
3841 11045 7.478322 CAATTGGAATGAGAACCTGTTCATAG 58.522 38.462 12.21 0.00 41.84 2.23
3843 11047 5.337009 GCAATTGGAATGAGAACCTGTTCAT 60.337 40.000 7.72 0.00 41.84 2.57
4126 11334 4.996758 GGCCAAACAAGCAAATATTTGACT 59.003 37.500 28.33 21.03 40.55 3.41
4127 11335 4.754114 TGGCCAAACAAGCAAATATTTGAC 59.246 37.500 28.33 19.42 40.55 3.18
4128 11336 4.965814 TGGCCAAACAAGCAAATATTTGA 58.034 34.783 28.33 3.41 40.55 2.69
4254 11463 7.572546 TCCCATATATGACCATGAAAGATGA 57.427 36.000 14.54 0.00 0.00 2.92
4276 11487 2.777832 AGTCTTGAGCTGGACATTCC 57.222 50.000 0.00 0.00 36.96 3.01
4403 11637 7.486802 TTAACTTTGCTACACCTTAAGACAC 57.513 36.000 3.36 0.00 0.00 3.67
4422 11667 5.094812 CACGCAAATGCACACATATTAACT 58.905 37.500 6.18 0.00 42.21 2.24
4423 11668 4.856487 ACACGCAAATGCACACATATTAAC 59.144 37.500 6.18 0.00 42.21 2.01
4424 11669 5.053140 ACACGCAAATGCACACATATTAA 57.947 34.783 6.18 0.00 42.21 1.40
4426 11671 3.574284 ACACGCAAATGCACACATATT 57.426 38.095 6.18 0.00 42.21 1.28
4429 11698 1.202394 ACAACACGCAAATGCACACAT 60.202 42.857 6.18 0.00 42.21 3.21
4701 11976 9.911788 CAATGAAGGGGTATTAAGATATGCTAT 57.088 33.333 0.00 0.00 0.00 2.97
4803 12078 0.536006 AACCTGGCAAGTGAGCTGAC 60.536 55.000 0.00 0.00 34.17 3.51
4829 12104 2.549754 CGTCAATCACAACCTTTGAGCT 59.450 45.455 0.00 0.00 30.50 4.09
4831 12106 3.138304 TCCGTCAATCACAACCTTTGAG 58.862 45.455 0.00 0.00 30.50 3.02
4864 12139 2.227089 CTGTTCCGAGTCCCTTCCCG 62.227 65.000 0.00 0.00 0.00 5.14
4894 12169 6.830838 AGAATTTTCTTACAATAGCCAGGGAG 59.169 38.462 0.00 0.00 32.55 4.30
4936 12211 3.496515 CCATTCCATTTGCCACACCTTTT 60.497 43.478 0.00 0.00 0.00 2.27
4995 12270 2.287915 CGCATTACTCCATTGTACCAGC 59.712 50.000 0.00 0.00 0.00 4.85
5035 12310 6.097554 AGCATAGCTACCGCAAGATCTATATT 59.902 38.462 16.93 0.00 36.99 1.28
5040 12315 1.967066 AGCATAGCTACCGCAAGATCT 59.033 47.619 16.93 0.00 36.99 2.75
5097 12372 4.860072 AGACGGCAACAGAAGAAAATTTC 58.140 39.130 0.00 0.00 0.00 2.17
5117 12393 3.382865 CAGTCTGCAGCTATCCACTAAGA 59.617 47.826 9.47 0.00 0.00 2.10
5260 12536 1.806542 CTTAAAGCACACATGGAGCGT 59.193 47.619 0.00 0.00 0.00 5.07
5261 12537 1.131126 CCTTAAAGCACACATGGAGCG 59.869 52.381 0.00 0.00 0.00 5.03
5320 12596 0.738762 ATGACGCTGCTGCTGTACTG 60.739 55.000 14.03 0.00 36.97 2.74
5362 12642 1.538047 ATGTTGTCACATGCTGTCCC 58.462 50.000 0.00 0.00 42.46 4.46
5384 12671 7.524717 AAATAAACTTGTCAACATAGTGCCT 57.475 32.000 0.00 0.00 0.00 4.75
5442 12731 2.555757 GCCATCCACCTCAATATTCAGC 59.444 50.000 0.00 0.00 0.00 4.26
5458 12747 0.889994 TGTCATGTTTGCAGGCCATC 59.110 50.000 5.01 0.00 0.00 3.51
5462 12751 3.504863 CTGTATTGTCATGTTTGCAGGC 58.495 45.455 0.00 0.00 0.00 4.85
5515 12804 4.870123 AGCACCAAAGCAATATCAAACA 57.130 36.364 0.00 0.00 36.85 2.83
5561 12850 1.757574 TACAAACTCGTTCGGTCACG 58.242 50.000 0.00 0.00 41.78 4.35
5567 12856 6.031003 GCAAACATAACATACAAACTCGTTCG 59.969 38.462 0.00 0.00 0.00 3.95
5568 12857 7.059488 CAGCAAACATAACATACAAACTCGTTC 59.941 37.037 0.00 0.00 0.00 3.95
5570 12859 6.017440 ACAGCAAACATAACATACAAACTCGT 60.017 34.615 0.00 0.00 0.00 4.18
5571 12860 6.370593 ACAGCAAACATAACATACAAACTCG 58.629 36.000 0.00 0.00 0.00 4.18
5572 12861 7.359595 TGACAGCAAACATAACATACAAACTC 58.640 34.615 0.00 0.00 0.00 3.01
5573 12862 7.228507 TCTGACAGCAAACATAACATACAAACT 59.771 33.333 0.00 0.00 0.00 2.66
5574 12863 7.359595 TCTGACAGCAAACATAACATACAAAC 58.640 34.615 0.00 0.00 0.00 2.93
5576 12865 7.503521 TTCTGACAGCAAACATAACATACAA 57.496 32.000 0.00 0.00 0.00 2.41
5577 12866 7.686438 ATTCTGACAGCAAACATAACATACA 57.314 32.000 0.00 0.00 0.00 2.29
5578 12867 8.853345 CAAATTCTGACAGCAAACATAACATAC 58.147 33.333 0.00 0.00 0.00 2.39
5600 12889 6.413892 ACCAAATGTGTTTTCTTGGACAAAT 58.586 32.000 6.69 0.00 40.72 2.32
5603 12892 6.531503 TTACCAAATGTGTTTTCTTGGACA 57.468 33.333 6.69 0.00 40.72 4.02
5605 12894 5.988561 GCATTACCAAATGTGTTTTCTTGGA 59.011 36.000 6.69 0.00 43.75 3.53
5607 12896 6.841443 TGCATTACCAAATGTGTTTTCTTG 57.159 33.333 0.57 0.00 43.75 3.02
5609 12898 6.996509 AGATGCATTACCAAATGTGTTTTCT 58.003 32.000 0.00 0.00 43.75 2.52
5610 12899 7.360269 CCAAGATGCATTACCAAATGTGTTTTC 60.360 37.037 0.00 0.00 43.75 2.29
5611 12900 6.427547 CCAAGATGCATTACCAAATGTGTTTT 59.572 34.615 0.00 0.00 43.75 2.43
5612 12901 5.933463 CCAAGATGCATTACCAAATGTGTTT 59.067 36.000 0.00 0.00 43.75 2.83
5613 12902 5.481105 CCAAGATGCATTACCAAATGTGTT 58.519 37.500 0.00 0.00 43.75 3.32
5614 12903 4.081531 CCCAAGATGCATTACCAAATGTGT 60.082 41.667 0.00 0.00 43.75 3.72
5615 12904 4.081531 ACCCAAGATGCATTACCAAATGTG 60.082 41.667 0.00 0.00 43.75 3.21
5617 12906 4.685924 GACCCAAGATGCATTACCAAATG 58.314 43.478 0.00 0.00 44.53 2.32
5638 12969 4.325028 TTGTAGTAAACAGAAGCACCGA 57.675 40.909 0.00 0.00 39.87 4.69
5640 12971 6.313164 GTCCTATTGTAGTAAACAGAAGCACC 59.687 42.308 0.00 0.00 39.87 5.01
5641 12972 6.872020 TGTCCTATTGTAGTAAACAGAAGCAC 59.128 38.462 0.00 0.00 39.87 4.40
5642 12973 6.999950 TGTCCTATTGTAGTAAACAGAAGCA 58.000 36.000 0.00 0.00 39.87 3.91
5652 12983 7.412853 TGCTGTTGTATGTCCTATTGTAGTA 57.587 36.000 0.00 0.00 0.00 1.82
5653 12984 6.294361 TGCTGTTGTATGTCCTATTGTAGT 57.706 37.500 0.00 0.00 0.00 2.73
5663 12994 7.859377 CCATGAGATATTTTGCTGTTGTATGTC 59.141 37.037 0.00 0.00 0.00 3.06
5680 13019 4.660303 AGACTTGGTAATGCCCATGAGATA 59.340 41.667 0.00 0.00 33.60 1.98
5726 13065 1.490490 GGCACATATGTTCCAGGAGGA 59.510 52.381 18.36 0.00 43.93 3.71
5727 13066 1.811558 CGGCACATATGTTCCAGGAGG 60.812 57.143 22.07 4.02 30.44 4.30
5728 13067 1.586422 CGGCACATATGTTCCAGGAG 58.414 55.000 22.07 4.36 30.44 3.69
5729 13068 0.180171 CCGGCACATATGTTCCAGGA 59.820 55.000 22.07 0.00 30.44 3.86
5730 13069 0.107214 ACCGGCACATATGTTCCAGG 60.107 55.000 22.07 22.77 33.83 4.45
5731 13070 1.016627 CACCGGCACATATGTTCCAG 58.983 55.000 22.07 14.56 30.44 3.86
5732 13071 0.615850 TCACCGGCACATATGTTCCA 59.384 50.000 22.07 2.12 30.44 3.53
5733 13072 1.873591 GATCACCGGCACATATGTTCC 59.126 52.381 13.94 13.94 0.00 3.62
5734 13073 2.802816 GAGATCACCGGCACATATGTTC 59.197 50.000 5.37 0.28 0.00 3.18
5735 13074 2.435805 AGAGATCACCGGCACATATGTT 59.564 45.455 5.37 0.00 0.00 2.71
5736 13075 2.036475 GAGAGATCACCGGCACATATGT 59.964 50.000 0.00 1.41 0.00 2.29
5737 13076 2.298446 AGAGAGATCACCGGCACATATG 59.702 50.000 0.00 0.00 0.00 1.78
5738 13077 2.603021 AGAGAGATCACCGGCACATAT 58.397 47.619 0.00 0.00 0.00 1.78
5739 13078 2.073252 AGAGAGATCACCGGCACATA 57.927 50.000 0.00 0.00 0.00 2.29
5740 13079 1.134580 CAAGAGAGATCACCGGCACAT 60.135 52.381 0.00 0.00 0.00 3.21
5741 13080 0.247460 CAAGAGAGATCACCGGCACA 59.753 55.000 0.00 0.00 0.00 4.57
5742 13081 0.532573 TCAAGAGAGATCACCGGCAC 59.467 55.000 0.00 0.00 0.00 5.01
5743 13082 0.820226 CTCAAGAGAGATCACCGGCA 59.180 55.000 0.00 0.00 44.98 5.69
5744 13083 0.529555 GCTCAAGAGAGATCACCGGC 60.530 60.000 0.00 0.00 44.98 6.13
5745 13084 1.110442 AGCTCAAGAGAGATCACCGG 58.890 55.000 0.00 0.00 44.98 5.28
5746 13085 1.802136 GCAGCTCAAGAGAGATCACCG 60.802 57.143 0.32 0.00 44.98 4.94
5747 13086 1.802136 CGCAGCTCAAGAGAGATCACC 60.802 57.143 0.32 0.00 44.98 4.02
5748 13087 1.135141 ACGCAGCTCAAGAGAGATCAC 60.135 52.381 0.32 0.00 44.98 3.06
5749 13088 1.133982 GACGCAGCTCAAGAGAGATCA 59.866 52.381 0.32 0.00 44.98 2.92
5750 13089 1.133982 TGACGCAGCTCAAGAGAGATC 59.866 52.381 0.32 0.00 44.98 2.75
5751 13090 1.135141 GTGACGCAGCTCAAGAGAGAT 60.135 52.381 0.32 0.00 44.98 2.75
5752 13091 0.242286 GTGACGCAGCTCAAGAGAGA 59.758 55.000 0.32 0.00 44.98 3.10
5753 13092 1.069924 CGTGACGCAGCTCAAGAGAG 61.070 60.000 0.32 0.00 44.96 3.20
5754 13093 1.081175 CGTGACGCAGCTCAAGAGA 60.081 57.895 0.32 0.00 0.00 3.10
5755 13094 0.941463 AACGTGACGCAGCTCAAGAG 60.941 55.000 4.25 0.00 0.00 2.85
5756 13095 0.529773 AAACGTGACGCAGCTCAAGA 60.530 50.000 4.25 0.00 0.00 3.02
5757 13096 0.111089 GAAACGTGACGCAGCTCAAG 60.111 55.000 4.25 0.00 0.00 3.02
5758 13097 0.808060 TGAAACGTGACGCAGCTCAA 60.808 50.000 4.25 0.00 0.00 3.02
5759 13098 0.599991 ATGAAACGTGACGCAGCTCA 60.600 50.000 4.25 3.03 0.00 4.26
5760 13099 0.179240 CATGAAACGTGACGCAGCTC 60.179 55.000 4.25 0.00 0.00 4.09
5761 13100 0.880278 ACATGAAACGTGACGCAGCT 60.880 50.000 4.25 0.00 0.00 4.24
5762 13101 0.722469 CACATGAAACGTGACGCAGC 60.722 55.000 4.25 0.00 36.43 5.25
5763 13102 0.581529 ACACATGAAACGTGACGCAG 59.418 50.000 4.25 0.00 37.80 5.18
5764 13103 1.010580 AACACATGAAACGTGACGCA 58.989 45.000 4.25 0.00 37.80 5.24
5765 13104 1.772966 CAAACACATGAAACGTGACGC 59.227 47.619 4.25 0.00 37.80 5.19
5766 13105 3.311788 TCAAACACATGAAACGTGACG 57.688 42.857 2.24 2.24 37.80 4.35
5767 13106 3.974401 CCATCAAACACATGAAACGTGAC 59.026 43.478 0.00 0.00 37.80 3.67
5768 13107 3.549827 GCCATCAAACACATGAAACGTGA 60.550 43.478 0.00 0.00 37.80 4.35
5769 13108 2.725723 GCCATCAAACACATGAAACGTG 59.274 45.455 0.00 0.00 40.32 4.49
5770 13109 2.360483 TGCCATCAAACACATGAAACGT 59.640 40.909 0.00 0.00 32.06 3.99
5771 13110 3.010624 TGCCATCAAACACATGAAACG 57.989 42.857 0.00 0.00 32.06 3.60
5772 13111 5.713025 ACTATGCCATCAAACACATGAAAC 58.287 37.500 0.00 0.00 32.06 2.78
5773 13112 5.476254 TGACTATGCCATCAAACACATGAAA 59.524 36.000 0.00 0.00 32.06 2.69
5774 13113 5.008980 TGACTATGCCATCAAACACATGAA 58.991 37.500 0.00 0.00 32.06 2.57
5775 13114 4.587891 TGACTATGCCATCAAACACATGA 58.412 39.130 0.00 0.00 0.00 3.07
5776 13115 4.968812 TGACTATGCCATCAAACACATG 57.031 40.909 0.00 0.00 0.00 3.21
5777 13116 5.068198 GGAATGACTATGCCATCAAACACAT 59.932 40.000 0.00 0.00 31.53 3.21
5778 13117 4.398988 GGAATGACTATGCCATCAAACACA 59.601 41.667 0.00 0.00 31.53 3.72
5779 13118 4.398988 TGGAATGACTATGCCATCAAACAC 59.601 41.667 0.00 0.00 37.06 3.32
5780 13119 4.598022 TGGAATGACTATGCCATCAAACA 58.402 39.130 0.00 0.00 37.06 2.83
5787 13126 7.289310 TGAAAGAATATGGAATGACTATGCCA 58.711 34.615 0.00 0.00 46.30 4.92
5788 13127 7.750229 TGAAAGAATATGGAATGACTATGCC 57.250 36.000 0.00 0.00 31.89 4.40
5789 13128 8.457261 GGATGAAAGAATATGGAATGACTATGC 58.543 37.037 0.00 0.00 0.00 3.14
5790 13129 8.954350 GGGATGAAAGAATATGGAATGACTATG 58.046 37.037 0.00 0.00 0.00 2.23
5791 13130 8.672329 TGGGATGAAAGAATATGGAATGACTAT 58.328 33.333 0.00 0.00 0.00 2.12
5792 13131 8.044574 TGGGATGAAAGAATATGGAATGACTA 57.955 34.615 0.00 0.00 0.00 2.59
5793 13132 6.914665 TGGGATGAAAGAATATGGAATGACT 58.085 36.000 0.00 0.00 0.00 3.41
5794 13133 7.587037 TTGGGATGAAAGAATATGGAATGAC 57.413 36.000 0.00 0.00 0.00 3.06
5795 13134 7.201938 GCTTTGGGATGAAAGAATATGGAATGA 60.202 37.037 0.00 0.00 35.30 2.57
5796 13135 6.927381 GCTTTGGGATGAAAGAATATGGAATG 59.073 38.462 0.00 0.00 35.30 2.67
5797 13136 6.612456 TGCTTTGGGATGAAAGAATATGGAAT 59.388 34.615 0.00 0.00 35.30 3.01
5798 13137 5.957168 TGCTTTGGGATGAAAGAATATGGAA 59.043 36.000 0.00 0.00 35.30 3.53
5799 13138 5.517924 TGCTTTGGGATGAAAGAATATGGA 58.482 37.500 0.00 0.00 35.30 3.41
5800 13139 5.857471 TGCTTTGGGATGAAAGAATATGG 57.143 39.130 0.00 0.00 35.30 2.74
5801 13140 9.991906 AAATATGCTTTGGGATGAAAGAATATG 57.008 29.630 7.10 0.00 40.89 1.78
5803 13142 9.820725 CAAAATATGCTTTGGGATGAAAGAATA 57.179 29.630 0.00 0.00 37.69 1.75
5804 13143 8.726870 CAAAATATGCTTTGGGATGAAAGAAT 57.273 30.769 0.00 0.00 35.65 2.40
5816 13155 5.047092 AGTGAACTCCCCAAAATATGCTTTG 60.047 40.000 0.00 0.00 36.28 2.77
5817 13156 5.086621 AGTGAACTCCCCAAAATATGCTTT 58.913 37.500 0.00 0.00 0.00 3.51
5818 13157 4.677182 AGTGAACTCCCCAAAATATGCTT 58.323 39.130 0.00 0.00 0.00 3.91
5819 13158 4.322057 AGTGAACTCCCCAAAATATGCT 57.678 40.909 0.00 0.00 0.00 3.79
5820 13159 4.381932 CCAAGTGAACTCCCCAAAATATGC 60.382 45.833 0.00 0.00 0.00 3.14
5821 13160 4.772100 ACCAAGTGAACTCCCCAAAATATG 59.228 41.667 0.00 0.00 0.00 1.78
5822 13161 4.772100 CACCAAGTGAACTCCCCAAAATAT 59.228 41.667 0.00 0.00 35.23 1.28
5823 13162 4.148838 CACCAAGTGAACTCCCCAAAATA 58.851 43.478 0.00 0.00 35.23 1.40
5824 13163 2.965147 CACCAAGTGAACTCCCCAAAAT 59.035 45.455 0.00 0.00 35.23 1.82
5825 13164 2.383855 CACCAAGTGAACTCCCCAAAA 58.616 47.619 0.00 0.00 35.23 2.44
5826 13165 2.026905 GCACCAAGTGAACTCCCCAAA 61.027 52.381 0.00 0.00 35.23 3.28
5827 13166 0.467290 GCACCAAGTGAACTCCCCAA 60.467 55.000 0.00 0.00 35.23 4.12
5828 13167 1.150536 GCACCAAGTGAACTCCCCA 59.849 57.895 0.00 0.00 35.23 4.96
5829 13168 0.890996 CTGCACCAAGTGAACTCCCC 60.891 60.000 0.00 0.00 35.23 4.81
5830 13169 0.108585 TCTGCACCAAGTGAACTCCC 59.891 55.000 0.00 0.00 35.23 4.30
5831 13170 1.876156 CTTCTGCACCAAGTGAACTCC 59.124 52.381 0.00 0.00 35.23 3.85
5832 13171 2.565841 ACTTCTGCACCAAGTGAACTC 58.434 47.619 5.64 0.00 35.23 3.01
5833 13172 2.717639 ACTTCTGCACCAAGTGAACT 57.282 45.000 5.64 0.00 35.23 3.01
5834 13173 3.119495 ACAAACTTCTGCACCAAGTGAAC 60.119 43.478 7.00 0.00 35.23 3.18
5835 13174 3.088532 ACAAACTTCTGCACCAAGTGAA 58.911 40.909 7.00 0.00 35.23 3.18
5836 13175 2.722094 ACAAACTTCTGCACCAAGTGA 58.278 42.857 7.00 0.00 35.23 3.41
5837 13176 4.630894 TTACAAACTTCTGCACCAAGTG 57.369 40.909 7.00 0.05 34.21 3.16
5838 13177 5.852282 AATTACAAACTTCTGCACCAAGT 57.148 34.783 1.10 1.10 35.51 3.16
5839 13178 5.050837 GCAAATTACAAACTTCTGCACCAAG 60.051 40.000 0.00 0.00 0.00 3.61
5840 13179 4.808364 GCAAATTACAAACTTCTGCACCAA 59.192 37.500 0.00 0.00 0.00 3.67
5841 13180 4.142071 TGCAAATTACAAACTTCTGCACCA 60.142 37.500 0.00 0.00 33.65 4.17
5842 13181 4.367450 TGCAAATTACAAACTTCTGCACC 58.633 39.130 0.00 0.00 33.65 5.01
5843 13182 5.050837 CCTTGCAAATTACAAACTTCTGCAC 60.051 40.000 0.00 0.00 38.00 4.57
5844 13183 5.049167 CCTTGCAAATTACAAACTTCTGCA 58.951 37.500 0.00 0.00 36.60 4.41
5845 13184 5.049828 ACCTTGCAAATTACAAACTTCTGC 58.950 37.500 0.00 0.00 0.00 4.26
5846 13185 7.425606 AGTACCTTGCAAATTACAAACTTCTG 58.574 34.615 15.87 0.00 0.00 3.02
5847 13186 7.582667 AGTACCTTGCAAATTACAAACTTCT 57.417 32.000 15.87 0.00 0.00 2.85
5848 13187 9.177304 GTAAGTACCTTGCAAATTACAAACTTC 57.823 33.333 15.87 5.02 31.51 3.01
5849 13188 8.688151 TGTAAGTACCTTGCAAATTACAAACTT 58.312 29.630 15.87 12.79 33.52 2.66
5850 13189 8.228035 TGTAAGTACCTTGCAAATTACAAACT 57.772 30.769 15.87 4.78 33.52 2.66
5851 13190 8.859517 TTGTAAGTACCTTGCAAATTACAAAC 57.140 30.769 15.63 13.23 41.52 2.93
5852 13191 8.138712 CCTTGTAAGTACCTTGCAAATTACAAA 58.861 33.333 17.55 7.02 43.17 2.83
5853 13192 7.653647 CCTTGTAAGTACCTTGCAAATTACAA 58.346 34.615 16.54 16.54 43.17 2.41
5854 13193 6.294286 GCCTTGTAAGTACCTTGCAAATTACA 60.294 38.462 15.87 11.03 43.17 2.41
5855 13194 6.072119 AGCCTTGTAAGTACCTTGCAAATTAC 60.072 38.462 0.00 4.83 43.17 1.89
5856 13195 6.007703 AGCCTTGTAAGTACCTTGCAAATTA 58.992 36.000 0.00 0.00 43.17 1.40
5857 13196 4.832823 AGCCTTGTAAGTACCTTGCAAATT 59.167 37.500 0.00 0.00 43.17 1.82
5858 13197 4.407365 AGCCTTGTAAGTACCTTGCAAAT 58.593 39.130 0.00 0.00 43.17 2.32
5859 13198 3.827722 AGCCTTGTAAGTACCTTGCAAA 58.172 40.909 0.00 0.00 43.17 3.68
5860 13199 3.502123 AGCCTTGTAAGTACCTTGCAA 57.498 42.857 0.00 0.00 42.03 4.08
5861 13200 3.502123 AAGCCTTGTAAGTACCTTGCA 57.498 42.857 0.00 0.00 34.54 4.08
5862 13201 4.519350 AGAAAAGCCTTGTAAGTACCTTGC 59.481 41.667 0.00 0.00 0.00 4.01
5863 13202 5.531287 ACAGAAAAGCCTTGTAAGTACCTTG 59.469 40.000 0.00 0.00 0.00 3.61
5864 13203 5.691896 ACAGAAAAGCCTTGTAAGTACCTT 58.308 37.500 0.00 0.00 0.00 3.50
5865 13204 5.071923 AGACAGAAAAGCCTTGTAAGTACCT 59.928 40.000 0.00 0.00 0.00 3.08
5866 13205 5.179555 CAGACAGAAAAGCCTTGTAAGTACC 59.820 44.000 0.00 0.00 0.00 3.34
5867 13206 5.989777 TCAGACAGAAAAGCCTTGTAAGTAC 59.010 40.000 0.00 0.00 0.00 2.73
5868 13207 6.169557 TCAGACAGAAAAGCCTTGTAAGTA 57.830 37.500 0.00 0.00 0.00 2.24
5869 13208 5.036117 TCAGACAGAAAAGCCTTGTAAGT 57.964 39.130 0.00 0.00 0.00 2.24
5870 13209 7.099764 TCTATCAGACAGAAAAGCCTTGTAAG 58.900 38.462 0.00 0.00 0.00 2.34
5871 13210 7.004555 TCTATCAGACAGAAAAGCCTTGTAA 57.995 36.000 0.00 0.00 0.00 2.41
5872 13211 6.605471 TCTATCAGACAGAAAAGCCTTGTA 57.395 37.500 0.00 0.00 0.00 2.41
5873 13212 5.489792 TCTATCAGACAGAAAAGCCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
5874 13213 5.526846 GGATCTATCAGACAGAAAAGCCTTG 59.473 44.000 0.00 0.00 0.00 3.61
5875 13214 5.190528 TGGATCTATCAGACAGAAAAGCCTT 59.809 40.000 0.00 0.00 0.00 4.35
5876 13215 4.718774 TGGATCTATCAGACAGAAAAGCCT 59.281 41.667 0.00 0.00 0.00 4.58
5877 13216 5.028549 TGGATCTATCAGACAGAAAAGCC 57.971 43.478 0.00 0.00 0.00 4.35
5878 13217 6.036953 CAGTTGGATCTATCAGACAGAAAAGC 59.963 42.308 0.00 0.00 0.00 3.51
5879 13218 6.036953 GCAGTTGGATCTATCAGACAGAAAAG 59.963 42.308 0.00 0.00 0.00 2.27
5880 13219 5.877012 GCAGTTGGATCTATCAGACAGAAAA 59.123 40.000 0.00 0.00 0.00 2.29
5881 13220 5.188555 AGCAGTTGGATCTATCAGACAGAAA 59.811 40.000 0.00 0.00 0.00 2.52
5882 13221 4.713814 AGCAGTTGGATCTATCAGACAGAA 59.286 41.667 0.00 0.00 0.00 3.02
5883 13222 4.285020 AGCAGTTGGATCTATCAGACAGA 58.715 43.478 0.00 0.00 0.00 3.41
5884 13223 4.669206 AGCAGTTGGATCTATCAGACAG 57.331 45.455 0.00 0.00 0.00 3.51
5885 13224 6.544928 TTTAGCAGTTGGATCTATCAGACA 57.455 37.500 0.00 0.00 0.00 3.41
5886 13225 7.212976 TCATTTAGCAGTTGGATCTATCAGAC 58.787 38.462 0.00 0.00 0.00 3.51
5887 13226 7.365497 TCATTTAGCAGTTGGATCTATCAGA 57.635 36.000 0.00 0.00 0.00 3.27
5888 13227 6.649973 CCTCATTTAGCAGTTGGATCTATCAG 59.350 42.308 0.00 0.00 0.00 2.90
5889 13228 6.528321 CCTCATTTAGCAGTTGGATCTATCA 58.472 40.000 0.00 0.00 0.00 2.15
5890 13229 5.411053 GCCTCATTTAGCAGTTGGATCTATC 59.589 44.000 0.00 0.00 0.00 2.08
5891 13230 5.163163 TGCCTCATTTAGCAGTTGGATCTAT 60.163 40.000 0.00 0.00 33.08 1.98
5892 13231 4.164030 TGCCTCATTTAGCAGTTGGATCTA 59.836 41.667 0.00 0.00 33.08 1.98
5893 13232 3.054139 TGCCTCATTTAGCAGTTGGATCT 60.054 43.478 0.00 0.00 33.08 2.75
5894 13233 3.282021 TGCCTCATTTAGCAGTTGGATC 58.718 45.455 0.00 0.00 33.08 3.36
5895 13234 3.370840 TGCCTCATTTAGCAGTTGGAT 57.629 42.857 0.00 0.00 33.08 3.41
5896 13235 2.819608 GTTGCCTCATTTAGCAGTTGGA 59.180 45.455 0.00 0.00 40.73 3.53
5897 13236 2.094545 GGTTGCCTCATTTAGCAGTTGG 60.095 50.000 0.00 0.00 40.73 3.77
5898 13237 2.094545 GGGTTGCCTCATTTAGCAGTTG 60.095 50.000 0.00 0.00 40.73 3.16
5899 13238 2.171003 GGGTTGCCTCATTTAGCAGTT 58.829 47.619 0.00 0.00 40.73 3.16
5900 13239 1.839424 GGGTTGCCTCATTTAGCAGT 58.161 50.000 0.00 0.00 40.73 4.40
5901 13240 0.734889 CGGGTTGCCTCATTTAGCAG 59.265 55.000 0.00 0.00 40.73 4.24
5902 13241 0.679640 CCGGGTTGCCTCATTTAGCA 60.680 55.000 0.00 0.00 37.18 3.49
5903 13242 0.679960 ACCGGGTTGCCTCATTTAGC 60.680 55.000 6.32 0.00 0.00 3.09
5904 13243 1.834188 AACCGGGTTGCCTCATTTAG 58.166 50.000 12.53 0.00 0.00 1.85
5905 13244 2.296073 AAACCGGGTTGCCTCATTTA 57.704 45.000 14.22 0.00 0.00 1.40
5906 13245 1.419381 AAAACCGGGTTGCCTCATTT 58.581 45.000 14.22 0.00 0.00 2.32
5907 13246 1.419381 AAAAACCGGGTTGCCTCATT 58.581 45.000 14.22 0.00 0.00 2.57
5908 13247 3.141409 AAAAACCGGGTTGCCTCAT 57.859 47.368 14.22 0.00 0.00 2.90
5909 13248 4.688770 AAAAACCGGGTTGCCTCA 57.311 50.000 14.22 0.00 0.00 3.86
5923 13262 1.551452 CTACCGGCAATGGGGAAAAA 58.449 50.000 0.00 0.00 0.00 1.94
5924 13263 0.968393 GCTACCGGCAATGGGGAAAA 60.968 55.000 0.00 0.00 41.35 2.29
5925 13264 1.379309 GCTACCGGCAATGGGGAAA 60.379 57.895 0.00 0.00 41.35 3.13
5926 13265 2.274104 GCTACCGGCAATGGGGAA 59.726 61.111 0.00 0.00 41.35 3.97
5935 13274 0.104855 TGATCTCACATGCTACCGGC 59.895 55.000 0.00 0.00 42.22 6.13
5936 13275 1.871408 GCTGATCTCACATGCTACCGG 60.871 57.143 0.00 0.00 0.00 5.28
5937 13276 1.068281 AGCTGATCTCACATGCTACCG 59.932 52.381 0.00 0.00 31.71 4.02
5938 13277 2.102084 TGAGCTGATCTCACATGCTACC 59.898 50.000 0.00 0.00 46.34 3.18
5939 13278 3.382855 CTGAGCTGATCTCACATGCTAC 58.617 50.000 0.00 0.00 46.34 3.58
5940 13279 2.223994 GCTGAGCTGATCTCACATGCTA 60.224 50.000 0.00 0.00 46.34 3.49
5941 13280 1.473610 GCTGAGCTGATCTCACATGCT 60.474 52.381 0.00 0.00 46.34 3.79
5942 13281 0.938713 GCTGAGCTGATCTCACATGC 59.061 55.000 0.00 0.00 46.34 4.06
5943 13282 1.209998 CGCTGAGCTGATCTCACATG 58.790 55.000 1.78 0.00 46.34 3.21
5944 13283 0.104487 CCGCTGAGCTGATCTCACAT 59.896 55.000 1.78 0.00 46.34 3.21
5945 13284 0.967380 TCCGCTGAGCTGATCTCACA 60.967 55.000 1.78 0.00 46.34 3.58
5946 13285 0.388659 ATCCGCTGAGCTGATCTCAC 59.611 55.000 5.49 0.00 46.34 3.51
5948 13287 0.672889 TCATCCGCTGAGCTGATCTC 59.327 55.000 8.45 0.00 42.23 2.75
5949 13288 0.675083 CTCATCCGCTGAGCTGATCT 59.325 55.000 8.45 0.00 44.73 2.75
5950 13289 3.198187 CTCATCCGCTGAGCTGATC 57.802 57.895 8.45 0.00 44.73 2.92
5957 13296 3.541996 TGATTTTAGCTCATCCGCTGA 57.458 42.857 0.00 0.00 41.12 4.26
5958 13297 3.873361 TCTTGATTTTAGCTCATCCGCTG 59.127 43.478 0.00 0.00 41.12 5.18
5959 13298 4.125703 CTCTTGATTTTAGCTCATCCGCT 58.874 43.478 0.00 0.00 43.83 5.52
5960 13299 4.122776 TCTCTTGATTTTAGCTCATCCGC 58.877 43.478 0.00 0.00 0.00 5.54
5961 13300 5.355596 ACTCTCTTGATTTTAGCTCATCCG 58.644 41.667 0.00 0.00 0.00 4.18
5962 13301 7.622893 AAACTCTCTTGATTTTAGCTCATCC 57.377 36.000 0.00 0.00 0.00 3.51
5964 13303 9.678260 ACATAAACTCTCTTGATTTTAGCTCAT 57.322 29.630 0.00 0.00 33.10 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.