Multiple sequence alignment - TraesCS7D01G070600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G070600 chr7D 100.000 3093 0 0 1 3093 41467847 41464755 0.000000e+00 5712.0
1 TraesCS7D01G070600 chr7D 97.279 1176 26 4 621 1791 135862940 135864114 0.000000e+00 1989.0
2 TraesCS7D01G070600 chr7D 97.026 1177 16 5 620 1791 508795047 508796209 0.000000e+00 1962.0
3 TraesCS7D01G070600 chr7D 93.734 1181 60 7 1922 3090 508796213 508797391 0.000000e+00 1759.0
4 TraesCS7D01G070600 chr7D 97.439 898 22 1 1922 2819 135864118 135865014 0.000000e+00 1530.0
5 TraesCS7D01G070600 chr7D 94.125 851 30 7 622 1454 574241587 574240739 0.000000e+00 1277.0
6 TraesCS7D01G070600 chr7D 81.429 630 99 8 1 620 41440695 41440074 1.880000e-137 499.0
7 TraesCS7D01G070600 chr7D 100.000 139 0 0 3377 3515 41464471 41464333 1.250000e-64 257.0
8 TraesCS7D01G070600 chr7D 93.525 139 9 0 3377 3515 41464907 41464769 1.280000e-49 207.0
9 TraesCS7D01G070600 chr7D 92.806 139 10 0 3377 3515 41465004 41464866 5.950000e-48 202.0
10 TraesCS7D01G070600 chr7D 92.593 135 10 0 3381 3515 508797041 508797175 9.960000e-46 195.0
11 TraesCS7D01G070600 chr7D 96.000 50 1 1 1873 1922 606942888 606942936 2.910000e-11 80.5
12 TraesCS7D01G070600 chr1D 97.617 1175 23 4 622 1791 481961642 481960468 0.000000e+00 2010.0
13 TraesCS7D01G070600 chr1D 94.628 1061 53 4 1922 2981 481960464 481959407 0.000000e+00 1640.0
14 TraesCS7D01G070600 chr1D 89.928 139 13 1 3377 3515 481959591 481959454 1.000000e-40 178.0
15 TraesCS7D01G070600 chr1D 98.000 50 1 0 1792 1841 254387509 254387460 1.740000e-13 87.9
16 TraesCS7D01G070600 chr1D 98.000 50 1 0 1792 1841 456016643 456016594 1.740000e-13 87.9
17 TraesCS7D01G070600 chr1D 97.872 47 0 1 1876 1922 212457153 212457198 2.910000e-11 80.5
18 TraesCS7D01G070600 chr1D 97.872 47 0 1 1876 1922 362740307 362740262 2.910000e-11 80.5
19 TraesCS7D01G070600 chr7B 95.021 1185 41 6 622 1798 719469219 719468045 0.000000e+00 1845.0
20 TraesCS7D01G070600 chr7B 91.667 132 11 0 3382 3513 719467055 719466924 2.150000e-42 183.0
21 TraesCS7D01G070600 chr2B 94.857 1186 52 6 619 1798 794527291 794528473 0.000000e+00 1844.0
22 TraesCS7D01G070600 chr5D 94.638 1175 23 5 622 1791 474542533 474543672 0.000000e+00 1784.0
23 TraesCS7D01G070600 chr5D 95.948 1086 26 5 622 1698 423748938 423750014 0.000000e+00 1746.0
24 TraesCS7D01G070600 chr5D 97.419 891 21 2 1929 2819 423750052 423750940 0.000000e+00 1517.0
25 TraesCS7D01G070600 chr5D 98.645 812 11 0 1922 2733 474543676 474544487 0.000000e+00 1439.0
26 TraesCS7D01G070600 chr5D 97.952 830 17 0 1922 2751 489756483 489757312 0.000000e+00 1439.0
27 TraesCS7D01G070600 chr5D 97.952 830 17 0 1922 2751 525156690 525157519 0.000000e+00 1439.0
28 TraesCS7D01G070600 chr5D 93.545 852 35 7 621 1454 78754565 78755414 0.000000e+00 1251.0
29 TraesCS7D01G070600 chr5D 89.706 340 33 2 2755 3093 525167196 525167534 1.940000e-117 433.0
30 TraesCS7D01G070600 chr5D 88.856 341 35 3 2751 3090 525167144 525167482 1.950000e-112 416.0
31 TraesCS7D01G070600 chr5D 88.406 345 37 3 2750 3093 525167046 525167388 2.520000e-111 412.0
32 TraesCS7D01G070600 chr5D 88.406 345 32 7 2750 3090 284887195 284887535 3.270000e-110 409.0
33 TraesCS7D01G070600 chr5D 88.116 345 39 2 2750 3093 284887438 284887781 3.270000e-110 409.0
34 TraesCS7D01G070600 chr5D 87.755 343 39 3 2750 3090 284887389 284887730 7.070000e-107 398.0
35 TraesCS7D01G070600 chr5D 94.964 139 7 0 3377 3515 525167236 525167374 5.910000e-53 219.0
36 TraesCS7D01G070600 chr5D 93.525 139 9 0 3377 3515 525167382 525167520 1.280000e-49 207.0
37 TraesCS7D01G070600 chr5D 89.928 139 13 1 3377 3515 525167091 525167228 1.000000e-40 178.0
38 TraesCS7D01G070600 chr3A 93.255 1186 66 10 622 1798 699770275 699771455 0.000000e+00 1735.0
39 TraesCS7D01G070600 chr3A 92.172 1188 81 10 619 1798 713795700 713796883 0.000000e+00 1668.0
40 TraesCS7D01G070600 chr3A 92.159 1186 79 11 622 1798 725985800 725986980 0.000000e+00 1663.0
41 TraesCS7D01G070600 chr3A 96.867 830 26 0 1922 2751 699771452 699772281 0.000000e+00 1389.0
42 TraesCS7D01G070600 chr3A 87.143 350 37 8 2750 3093 699773044 699773391 1.180000e-104 390.0
43 TraesCS7D01G070600 chr3A 89.362 141 13 2 3377 3515 699773089 699773229 3.610000e-40 176.0
44 TraesCS7D01G070600 chr5A 92.833 1186 65 11 622 1798 9494743 9493569 0.000000e+00 1701.0
45 TraesCS7D01G070600 chr5A 100.000 41 0 0 1841 1881 16534730 16534690 3.760000e-10 76.8
46 TraesCS7D01G070600 chr5A 97.561 41 1 0 1841 1881 420176336 420176296 1.750000e-08 71.3
47 TraesCS7D01G070600 chr2A 92.152 1185 81 9 622 1798 753951605 753952785 0.000000e+00 1663.0
48 TraesCS7D01G070600 chr2A 87.572 346 41 2 2750 3093 139969363 139969018 1.970000e-107 399.0
49 TraesCS7D01G070600 chr6A 91.807 1184 79 10 623 1798 369654872 369656045 0.000000e+00 1633.0
50 TraesCS7D01G070600 chr6A 98.000 50 1 0 1792 1841 84404077 84404126 1.740000e-13 87.9
51 TraesCS7D01G070600 chr6A 98.000 50 1 0 1792 1841 531825954 531826003 1.740000e-13 87.9
52 TraesCS7D01G070600 chr6A 98.000 50 1 0 1792 1841 608548774 608548823 1.740000e-13 87.9
53 TraesCS7D01G070600 chr6A 97.561 41 1 0 1841 1881 9637514 9637474 1.750000e-08 71.3
54 TraesCS7D01G070600 chr6A 97.561 41 1 0 1841 1881 9670110 9670070 1.750000e-08 71.3
55 TraesCS7D01G070600 chr2D 97.419 891 21 2 1929 2819 102620873 102621761 0.000000e+00 1517.0
56 TraesCS7D01G070600 chr3D 98.039 51 1 0 1791 1841 520164413 520164463 4.830000e-14 89.8
57 TraesCS7D01G070600 chr4D 98.000 50 1 0 1792 1841 88104063 88104014 1.740000e-13 87.9
58 TraesCS7D01G070600 chr4D 98.000 50 1 0 1792 1841 123443509 123443558 1.740000e-13 87.9
59 TraesCS7D01G070600 chr4D 98.000 50 1 0 1792 1841 177441866 177441817 1.740000e-13 87.9
60 TraesCS7D01G070600 chr4D 97.872 47 0 1 1876 1922 123389942 123389897 2.910000e-11 80.5
61 TraesCS7D01G070600 chr4D 97.872 47 0 1 1876 1922 123547604 123547559 2.910000e-11 80.5
62 TraesCS7D01G070600 chr4D 97.561 41 1 0 1841 1881 450883269 450883229 1.750000e-08 71.3
63 TraesCS7D01G070600 chrUn 97.872 47 0 1 1876 1922 170996714 170996669 2.910000e-11 80.5
64 TraesCS7D01G070600 chrUn 97.872 47 0 1 1876 1922 456051209 456051164 2.910000e-11 80.5
65 TraesCS7D01G070600 chr5B 96.000 50 1 1 1874 1922 169043366 169043415 2.910000e-11 80.5
66 TraesCS7D01G070600 chr1B 97.872 47 0 1 1876 1922 672529670 672529625 2.910000e-11 80.5
67 TraesCS7D01G070600 chr1B 97.561 41 1 0 1841 1881 339050093 339050053 1.750000e-08 71.3
68 TraesCS7D01G070600 chr1B 97.561 41 1 0 1841 1881 583571398 583571438 1.750000e-08 71.3
69 TraesCS7D01G070600 chr4A 92.308 52 3 1 1841 1891 671015189 671015240 4.870000e-09 73.1
70 TraesCS7D01G070600 chr4B 97.561 41 1 0 1841 1881 209220676 209220636 1.750000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G070600 chr7D 41464333 41467847 3514 True 1594.500000 5712 96.582750 1 3515 4 chr7D.!!$R3 3514
1 TraesCS7D01G070600 chr7D 135862940 135865014 2074 False 1759.500000 1989 97.359000 621 2819 2 chr7D.!!$F2 2198
2 TraesCS7D01G070600 chr7D 508795047 508797391 2344 False 1305.333333 1962 94.451000 620 3515 3 chr7D.!!$F3 2895
3 TraesCS7D01G070600 chr7D 574240739 574241587 848 True 1277.000000 1277 94.125000 622 1454 1 chr7D.!!$R2 832
4 TraesCS7D01G070600 chr7D 41440074 41440695 621 True 499.000000 499 81.429000 1 620 1 chr7D.!!$R1 619
5 TraesCS7D01G070600 chr1D 481959407 481961642 2235 True 1276.000000 2010 94.057667 622 3515 3 chr1D.!!$R4 2893
6 TraesCS7D01G070600 chr7B 719466924 719469219 2295 True 1014.000000 1845 93.344000 622 3513 2 chr7B.!!$R1 2891
7 TraesCS7D01G070600 chr2B 794527291 794528473 1182 False 1844.000000 1844 94.857000 619 1798 1 chr2B.!!$F1 1179
8 TraesCS7D01G070600 chr5D 423748938 423750940 2002 False 1631.500000 1746 96.683500 622 2819 2 chr5D.!!$F5 2197
9 TraesCS7D01G070600 chr5D 474542533 474544487 1954 False 1611.500000 1784 96.641500 622 2733 2 chr5D.!!$F6 2111
10 TraesCS7D01G070600 chr5D 489756483 489757312 829 False 1439.000000 1439 97.952000 1922 2751 1 chr5D.!!$F2 829
11 TraesCS7D01G070600 chr5D 525156690 525157519 829 False 1439.000000 1439 97.952000 1922 2751 1 chr5D.!!$F3 829
12 TraesCS7D01G070600 chr5D 78754565 78755414 849 False 1251.000000 1251 93.545000 621 1454 1 chr5D.!!$F1 833
13 TraesCS7D01G070600 chr5D 284887195 284887781 586 False 405.333333 409 88.092333 2750 3093 3 chr5D.!!$F4 343
14 TraesCS7D01G070600 chr3A 713795700 713796883 1183 False 1668.000000 1668 92.172000 619 1798 1 chr3A.!!$F1 1179
15 TraesCS7D01G070600 chr3A 725985800 725986980 1180 False 1663.000000 1663 92.159000 622 1798 1 chr3A.!!$F2 1176
16 TraesCS7D01G070600 chr3A 699770275 699773391 3116 False 922.500000 1735 91.656750 622 3515 4 chr3A.!!$F3 2893
17 TraesCS7D01G070600 chr5A 9493569 9494743 1174 True 1701.000000 1701 92.833000 622 1798 1 chr5A.!!$R1 1176
18 TraesCS7D01G070600 chr2A 753951605 753952785 1180 False 1663.000000 1663 92.152000 622 1798 1 chr2A.!!$F1 1176
19 TraesCS7D01G070600 chr6A 369654872 369656045 1173 False 1633.000000 1633 91.807000 623 1798 1 chr6A.!!$F2 1175
20 TraesCS7D01G070600 chr2D 102620873 102621761 888 False 1517.000000 1517 97.419000 1929 2819 1 chr2D.!!$F1 890

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.034896 AACACAGTTAGGTCCCGCAG 59.965 55.0 0.0 0.0 0.0 5.18 F
115 116 0.108615 CCCTGGTCTGCTACTTCGTG 60.109 60.0 0.0 0.0 0.0 4.35 F
495 496 0.174389 CTCTCCCACGACATCCACAG 59.826 60.0 0.0 0.0 0.0 3.66 F
614 615 0.242825 TGACGCCCAGTTCTTCTACG 59.757 55.0 0.0 0.0 0.0 3.51 F
1000 1010 0.249447 CGCCATAGAAGATGCCGTCA 60.249 55.0 0.0 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1912 1970 0.251073 AAGTATTACAACCCGCCGCT 59.749 50.000 0.0 0.0 0.0 5.52 R
1913 1971 0.375803 CAAGTATTACAACCCGCCGC 59.624 55.000 0.0 0.0 0.0 6.53 R
1952 2010 0.773644 AACCCACTGAGCAACTCCAT 59.226 50.000 0.0 0.0 0.0 3.41 R
2084 2142 2.137523 CCAATTGCTTGTTCACCTTGC 58.862 47.619 0.0 0.0 0.0 4.01 R
2820 3524 1.005748 GCCCAAGCCACTCAAAAGC 60.006 57.895 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.961394 ACATCATCGGGTATAGCACGT 59.039 47.619 4.02 0.00 45.75 4.49
32 33 0.944311 CATCGGGTATAGCACGTGGC 60.944 60.000 18.88 9.78 45.75 5.01
55 56 2.203139 CTCGGTGCCCACAACACA 60.203 61.111 0.40 0.00 39.87 3.72
58 59 2.118404 CGGTGCCCACAACACAGTT 61.118 57.895 0.40 0.00 39.87 3.16
69 70 0.034896 AACACAGTTAGGTCCCGCAG 59.965 55.000 0.00 0.00 0.00 5.18
73 74 0.321653 CAGTTAGGTCCCGCAGCTTT 60.322 55.000 0.00 0.00 33.71 3.51
108 109 2.688666 CTGGGCCCTGGTCTGCTA 60.689 66.667 25.70 0.00 0.00 3.49
113 114 1.153549 GCCCTGGTCTGCTACTTCG 60.154 63.158 0.00 0.00 0.00 3.79
114 115 1.889530 GCCCTGGTCTGCTACTTCGT 61.890 60.000 0.00 0.00 0.00 3.85
115 116 0.108615 CCCTGGTCTGCTACTTCGTG 60.109 60.000 0.00 0.00 0.00 4.35
116 117 0.603569 CCTGGTCTGCTACTTCGTGT 59.396 55.000 0.00 0.00 0.00 4.49
118 119 1.269723 CTGGTCTGCTACTTCGTGTCA 59.730 52.381 0.00 0.00 0.00 3.58
121 122 3.244078 TGGTCTGCTACTTCGTGTCAAAT 60.244 43.478 0.00 0.00 0.00 2.32
122 123 4.021807 TGGTCTGCTACTTCGTGTCAAATA 60.022 41.667 0.00 0.00 0.00 1.40
125 126 4.021807 TCTGCTACTTCGTGTCAAATACCA 60.022 41.667 0.00 0.00 0.00 3.25
157 158 2.717044 CGTCACCCTGGCGTCCATA 61.717 63.158 0.00 0.00 41.12 2.74
166 167 4.937431 GCGTCCATAGCCCTGGCC 62.937 72.222 4.13 0.00 43.17 5.36
167 168 4.256180 CGTCCATAGCCCTGGCCC 62.256 72.222 4.13 0.00 43.17 5.80
168 169 2.774351 GTCCATAGCCCTGGCCCT 60.774 66.667 4.13 0.00 43.17 5.19
169 170 2.773918 TCCATAGCCCTGGCCCTG 60.774 66.667 4.13 2.63 43.17 4.45
170 171 3.894638 CCATAGCCCTGGCCCTGG 61.895 72.222 4.13 8.30 43.17 4.45
178 179 2.360852 CTGGCCCTGGAGCTGTTG 60.361 66.667 0.00 0.00 0.00 3.33
179 180 2.853542 TGGCCCTGGAGCTGTTGA 60.854 61.111 0.00 0.00 0.00 3.18
184 185 0.322008 CCCTGGAGCTGTTGAGGAAC 60.322 60.000 0.00 0.00 0.00 3.62
187 188 0.318441 TGGAGCTGTTGAGGAACGAG 59.682 55.000 0.00 0.00 34.49 4.18
189 190 1.670380 GGAGCTGTTGAGGAACGAGAC 60.670 57.143 0.00 0.00 34.49 3.36
199 200 3.996744 GAACGAGACCGACGAGGCG 62.997 68.421 0.00 0.00 46.52 5.52
226 227 1.452651 CACGGCCAGCATCAGGATT 60.453 57.895 2.24 0.00 0.00 3.01
232 233 2.013563 GCCAGCATCAGGATTGACGAA 61.014 52.381 0.00 0.00 35.83 3.85
236 237 1.678728 GCATCAGGATTGACGAACCCA 60.679 52.381 0.00 0.00 35.83 4.51
242 243 4.973055 TTGACGAACCCACCGGCG 62.973 66.667 0.00 0.00 38.00 6.46
292 293 4.699522 GCCGAGCCCCACGTCTTT 62.700 66.667 0.00 0.00 0.00 2.52
295 296 2.434359 GAGCCCCACGTCTTTCCG 60.434 66.667 0.00 0.00 0.00 4.30
298 299 4.323477 CCCCACGTCTTTCCGGCA 62.323 66.667 0.00 0.00 0.00 5.69
306 307 0.394352 GTCTTTCCGGCATGGTCCAT 60.394 55.000 0.00 0.00 39.52 3.41
310 311 1.561769 TTCCGGCATGGTCCATGAGT 61.562 55.000 32.16 0.00 43.81 3.41
314 315 2.475466 GCATGGTCCATGAGTGCCG 61.475 63.158 32.16 7.34 43.81 5.69
357 358 4.292208 CGCGTTCGTGCAGCACAA 62.292 61.111 25.19 14.97 33.40 3.33
358 359 2.425773 GCGTTCGTGCAGCACAAG 60.426 61.111 25.19 13.19 33.40 3.16
359 360 2.881266 GCGTTCGTGCAGCACAAGA 61.881 57.895 25.19 12.39 34.77 3.02
360 361 1.641140 CGTTCGTGCAGCACAAGAA 59.359 52.632 25.19 17.44 43.29 2.52
361 362 0.383491 CGTTCGTGCAGCACAAGAAG 60.383 55.000 25.19 8.62 45.58 2.85
362 363 0.658536 GTTCGTGCAGCACAAGAAGC 60.659 55.000 25.19 11.54 45.58 3.86
363 364 2.104770 TTCGTGCAGCACAAGAAGCG 62.105 55.000 25.19 9.57 41.10 4.68
364 365 2.428071 GTGCAGCACAAGAAGCGC 60.428 61.111 21.22 0.00 37.01 5.92
365 366 2.592574 TGCAGCACAAGAAGCGCT 60.593 55.556 2.64 2.64 35.62 5.92
366 367 1.301637 TGCAGCACAAGAAGCGCTA 60.302 52.632 12.05 0.00 32.89 4.26
367 368 1.133458 GCAGCACAAGAAGCGCTAC 59.867 57.895 12.05 0.00 32.89 3.58
368 369 1.417592 CAGCACAAGAAGCGCTACG 59.582 57.895 12.05 1.45 32.89 3.51
369 370 1.006102 AGCACAAGAAGCGCTACGT 60.006 52.632 12.05 2.20 32.89 3.57
370 371 1.009389 AGCACAAGAAGCGCTACGTC 61.009 55.000 12.05 4.52 32.89 4.34
371 372 1.282248 GCACAAGAAGCGCTACGTCA 61.282 55.000 12.05 0.00 0.00 4.35
372 373 1.350193 CACAAGAAGCGCTACGTCAT 58.650 50.000 12.05 0.00 0.00 3.06
373 374 1.059692 CACAAGAAGCGCTACGTCATG 59.940 52.381 12.05 10.99 32.65 3.07
374 375 0.647410 CAAGAAGCGCTACGTCATGG 59.353 55.000 12.05 0.00 0.00 3.66
375 376 0.530744 AAGAAGCGCTACGTCATGGA 59.469 50.000 12.05 0.00 0.00 3.41
376 377 0.179134 AGAAGCGCTACGTCATGGAC 60.179 55.000 12.05 0.00 0.00 4.02
385 386 4.504132 GTCATGGACGACTGCCTC 57.496 61.111 0.00 0.00 32.92 4.70
386 387 1.591703 GTCATGGACGACTGCCTCA 59.408 57.895 0.00 0.00 32.92 3.86
387 388 0.737715 GTCATGGACGACTGCCTCAC 60.738 60.000 0.00 0.00 32.92 3.51
388 389 1.448540 CATGGACGACTGCCTCACC 60.449 63.158 0.00 0.00 0.00 4.02
389 390 3.006756 ATGGACGACTGCCTCACCG 62.007 63.158 0.00 0.00 0.00 4.94
390 391 3.681835 GGACGACTGCCTCACCGT 61.682 66.667 0.00 0.00 38.01 4.83
391 392 2.430921 GACGACTGCCTCACCGTG 60.431 66.667 0.00 0.00 35.22 4.94
392 393 4.664677 ACGACTGCCTCACCGTGC 62.665 66.667 0.00 0.00 33.69 5.34
393 394 4.662961 CGACTGCCTCACCGTGCA 62.663 66.667 0.00 0.00 35.86 4.57
394 395 3.044305 GACTGCCTCACCGTGCAC 61.044 66.667 6.82 6.82 33.17 4.57
395 396 3.521529 GACTGCCTCACCGTGCACT 62.522 63.158 16.19 0.00 33.17 4.40
396 397 3.046087 CTGCCTCACCGTGCACTG 61.046 66.667 16.19 11.43 33.17 3.66
398 399 4.996434 GCCTCACCGTGCACTGCT 62.996 66.667 16.19 0.00 0.00 4.24
399 400 2.740055 CCTCACCGTGCACTGCTC 60.740 66.667 16.19 0.00 0.00 4.26
400 401 2.740055 CTCACCGTGCACTGCTCC 60.740 66.667 16.19 0.00 0.00 4.70
401 402 4.662961 TCACCGTGCACTGCTCCG 62.663 66.667 16.19 0.00 0.00 4.63
402 403 4.969196 CACCGTGCACTGCTCCGT 62.969 66.667 16.19 0.00 0.00 4.69
403 404 4.664677 ACCGTGCACTGCTCCGTC 62.665 66.667 16.19 0.00 0.00 4.79
405 406 4.700365 CGTGCACTGCTCCGTCGA 62.700 66.667 16.19 0.00 0.00 4.20
406 407 2.807045 GTGCACTGCTCCGTCGAG 60.807 66.667 10.32 0.00 39.33 4.04
407 408 4.056125 TGCACTGCTCCGTCGAGG 62.056 66.667 1.98 0.00 42.97 4.63
408 409 4.057428 GCACTGCTCCGTCGAGGT 62.057 66.667 4.18 0.00 41.99 3.85
409 410 2.179517 CACTGCTCCGTCGAGGTC 59.820 66.667 4.18 0.00 41.99 3.85
410 411 3.063084 ACTGCTCCGTCGAGGTCC 61.063 66.667 4.18 0.00 41.99 4.46
411 412 2.752238 CTGCTCCGTCGAGGTCCT 60.752 66.667 4.18 0.00 41.99 3.85
412 413 2.750637 TGCTCCGTCGAGGTCCTC 60.751 66.667 9.05 9.05 41.99 3.71
413 414 2.750637 GCTCCGTCGAGGTCCTCA 60.751 66.667 19.15 3.46 41.99 3.86
414 415 2.341101 GCTCCGTCGAGGTCCTCAA 61.341 63.158 19.15 0.00 41.99 3.02
415 416 1.803943 CTCCGTCGAGGTCCTCAAG 59.196 63.158 19.15 8.71 41.99 3.02
416 417 1.658686 CTCCGTCGAGGTCCTCAAGG 61.659 65.000 19.15 16.71 41.99 3.61
417 418 1.677966 CCGTCGAGGTCCTCAAGGA 60.678 63.158 19.15 5.33 43.08 3.36
418 419 1.658686 CCGTCGAGGTCCTCAAGGAG 61.659 65.000 19.15 2.12 46.49 3.69
444 445 3.961414 GGACGGGGCCACAAGGAA 61.961 66.667 5.46 0.00 36.89 3.36
445 446 2.359975 GACGGGGCCACAAGGAAG 60.360 66.667 5.46 0.00 36.89 3.46
446 447 3.175710 ACGGGGCCACAAGGAAGT 61.176 61.111 5.46 0.00 36.89 3.01
447 448 1.833787 GACGGGGCCACAAGGAAGTA 61.834 60.000 5.46 0.00 36.89 2.24
448 449 1.376812 CGGGGCCACAAGGAAGTAC 60.377 63.158 5.46 0.00 36.89 2.73
449 450 1.765074 GGGGCCACAAGGAAGTACA 59.235 57.895 4.39 0.00 36.89 2.90
450 451 0.331616 GGGGCCACAAGGAAGTACAT 59.668 55.000 4.39 0.00 36.89 2.29
451 452 1.463674 GGGCCACAAGGAAGTACATG 58.536 55.000 4.39 0.00 36.89 3.21
452 453 1.463674 GGCCACAAGGAAGTACATGG 58.536 55.000 0.00 0.00 36.89 3.66
453 454 1.271926 GGCCACAAGGAAGTACATGGT 60.272 52.381 0.00 0.00 36.89 3.55
454 455 2.084546 GCCACAAGGAAGTACATGGTC 58.915 52.381 0.00 0.00 36.89 4.02
455 456 2.346803 CCACAAGGAAGTACATGGTCG 58.653 52.381 0.00 0.00 36.89 4.79
456 457 2.346803 CACAAGGAAGTACATGGTCGG 58.653 52.381 0.00 0.00 0.00 4.79
457 458 1.338769 ACAAGGAAGTACATGGTCGGC 60.339 52.381 0.00 0.00 0.00 5.54
458 459 0.981183 AAGGAAGTACATGGTCGGCA 59.019 50.000 0.00 0.00 0.00 5.69
459 460 1.204146 AGGAAGTACATGGTCGGCAT 58.796 50.000 0.00 0.00 0.00 4.40
460 461 1.134401 AGGAAGTACATGGTCGGCATG 60.134 52.381 0.00 0.00 36.22 4.06
461 462 0.657840 GAAGTACATGGTCGGCATGC 59.342 55.000 9.90 9.90 33.61 4.06
462 463 0.748005 AAGTACATGGTCGGCATGCC 60.748 55.000 27.67 27.67 33.61 4.40
463 464 2.186826 GTACATGGTCGGCATGCCC 61.187 63.158 30.79 17.56 33.61 5.36
464 465 3.414136 TACATGGTCGGCATGCCCC 62.414 63.158 30.79 25.79 33.61 5.80
487 488 3.827898 CCGAGCCTCTCCCACGAC 61.828 72.222 0.00 0.00 0.00 4.34
488 489 3.062466 CGAGCCTCTCCCACGACA 61.062 66.667 0.00 0.00 0.00 4.35
489 490 2.418910 CGAGCCTCTCCCACGACAT 61.419 63.158 0.00 0.00 0.00 3.06
490 491 1.439644 GAGCCTCTCCCACGACATC 59.560 63.158 0.00 0.00 0.00 3.06
491 492 2.022240 GAGCCTCTCCCACGACATCC 62.022 65.000 0.00 0.00 0.00 3.51
492 493 2.359169 GCCTCTCCCACGACATCCA 61.359 63.158 0.00 0.00 0.00 3.41
493 494 1.517832 CCTCTCCCACGACATCCAC 59.482 63.158 0.00 0.00 0.00 4.02
494 495 1.257750 CCTCTCCCACGACATCCACA 61.258 60.000 0.00 0.00 0.00 4.17
495 496 0.174389 CTCTCCCACGACATCCACAG 59.826 60.000 0.00 0.00 0.00 3.66
496 497 1.219124 CTCCCACGACATCCACAGG 59.781 63.158 0.00 0.00 0.00 4.00
497 498 2.436646 CCCACGACATCCACAGGC 60.437 66.667 0.00 0.00 0.00 4.85
498 499 2.665000 CCACGACATCCACAGGCT 59.335 61.111 0.00 0.00 0.00 4.58
499 500 1.613317 CCCACGACATCCACAGGCTA 61.613 60.000 0.00 0.00 0.00 3.93
500 501 0.460284 CCACGACATCCACAGGCTAC 60.460 60.000 0.00 0.00 0.00 3.58
501 502 0.802222 CACGACATCCACAGGCTACG 60.802 60.000 0.00 0.00 0.00 3.51
502 503 1.226974 CGACATCCACAGGCTACGG 60.227 63.158 0.00 0.00 0.00 4.02
503 504 1.521681 GACATCCACAGGCTACGGC 60.522 63.158 0.00 0.00 37.82 5.68
504 505 2.238847 GACATCCACAGGCTACGGCA 62.239 60.000 0.00 0.00 40.87 5.69
505 506 1.522355 CATCCACAGGCTACGGCAG 60.522 63.158 0.00 0.00 40.87 4.85
506 507 2.735772 ATCCACAGGCTACGGCAGG 61.736 63.158 0.00 0.00 40.87 4.85
507 508 3.390521 CCACAGGCTACGGCAGGA 61.391 66.667 0.00 0.00 40.87 3.86
508 509 2.125512 CACAGGCTACGGCAGGAC 60.126 66.667 0.00 0.00 40.87 3.85
509 510 2.603473 ACAGGCTACGGCAGGACA 60.603 61.111 0.00 0.00 40.87 4.02
510 511 1.990060 ACAGGCTACGGCAGGACAT 60.990 57.895 0.00 0.00 40.87 3.06
511 512 1.522355 CAGGCTACGGCAGGACATG 60.522 63.158 0.00 0.00 40.87 3.21
512 513 1.990060 AGGCTACGGCAGGACATGT 60.990 57.895 0.00 0.00 40.87 3.21
513 514 1.815421 GGCTACGGCAGGACATGTG 60.815 63.158 1.15 0.00 40.87 3.21
514 515 1.815421 GCTACGGCAGGACATGTGG 60.815 63.158 1.15 0.00 38.54 4.17
515 516 1.596934 CTACGGCAGGACATGTGGT 59.403 57.895 1.15 0.00 0.00 4.16
516 517 0.740868 CTACGGCAGGACATGTGGTG 60.741 60.000 1.15 0.68 0.00 4.17
517 518 2.178876 TACGGCAGGACATGTGGTGG 62.179 60.000 1.15 0.00 0.00 4.61
518 519 3.064324 GGCAGGACATGTGGTGGC 61.064 66.667 1.15 9.05 33.92 5.01
524 525 2.485677 GACATGTGGTGGCCTGATG 58.514 57.895 1.15 1.40 0.00 3.07
525 526 0.322816 GACATGTGGTGGCCTGATGT 60.323 55.000 1.15 4.85 31.86 3.06
526 527 0.322816 ACATGTGGTGGCCTGATGTC 60.323 55.000 3.32 0.00 0.00 3.06
527 528 0.322726 CATGTGGTGGCCTGATGTCA 60.323 55.000 3.32 0.00 0.00 3.58
528 529 0.322816 ATGTGGTGGCCTGATGTCAC 60.323 55.000 3.32 4.17 0.00 3.67
529 530 2.034879 GTGGTGGCCTGATGTCACG 61.035 63.158 3.32 0.00 32.65 4.35
530 531 2.347490 GGTGGCCTGATGTCACGT 59.653 61.111 3.32 0.00 32.65 4.49
531 532 1.302511 GGTGGCCTGATGTCACGTT 60.303 57.895 3.32 0.00 32.65 3.99
532 533 1.298859 GGTGGCCTGATGTCACGTTC 61.299 60.000 3.32 0.00 32.65 3.95
533 534 0.602638 GTGGCCTGATGTCACGTTCA 60.603 55.000 3.32 0.00 0.00 3.18
534 535 0.602638 TGGCCTGATGTCACGTTCAC 60.603 55.000 3.32 0.00 0.00 3.18
535 536 1.298859 GGCCTGATGTCACGTTCACC 61.299 60.000 0.00 0.00 0.00 4.02
536 537 1.626654 GCCTGATGTCACGTTCACCG 61.627 60.000 0.00 0.00 44.03 4.94
553 554 2.804090 GTCGACGACGCCAAGGTC 60.804 66.667 12.94 0.00 39.58 3.85
554 555 4.047059 TCGACGACGCCAAGGTCC 62.047 66.667 1.48 0.00 39.58 4.46
555 556 4.351938 CGACGACGCCAAGGTCCA 62.352 66.667 0.00 0.00 33.30 4.02
556 557 2.432628 GACGACGCCAAGGTCCAG 60.433 66.667 0.00 0.00 33.30 3.86
557 558 3.934391 GACGACGCCAAGGTCCAGG 62.934 68.421 0.00 0.00 33.30 4.45
563 564 4.641645 CCAAGGTCCAGGCGCACA 62.642 66.667 10.83 0.00 0.00 4.57
564 565 2.594303 CAAGGTCCAGGCGCACAA 60.594 61.111 10.83 0.00 0.00 3.33
565 566 2.281761 AAGGTCCAGGCGCACAAG 60.282 61.111 10.83 0.00 0.00 3.16
568 569 3.426568 GTCCAGGCGCACAAGCTC 61.427 66.667 10.83 0.00 39.10 4.09
571 572 4.081030 CAGGCGCACAAGCTCGTG 62.081 66.667 10.83 0.00 39.10 4.35
598 599 3.946907 CGGTCACGGGTCTTTGAC 58.053 61.111 0.00 0.00 41.28 3.18
599 600 2.019951 CGGTCACGGGTCTTTGACG 61.020 63.158 0.00 0.00 42.67 4.35
600 601 2.315386 GGTCACGGGTCTTTGACGC 61.315 63.158 4.93 4.93 42.67 5.19
601 602 2.029964 TCACGGGTCTTTGACGCC 59.970 61.111 8.75 3.11 41.49 5.68
602 603 3.047877 CACGGGTCTTTGACGCCC 61.048 66.667 8.75 0.00 41.49 6.13
603 604 3.552384 ACGGGTCTTTGACGCCCA 61.552 61.111 8.75 0.00 41.49 5.36
604 605 2.742372 CGGGTCTTTGACGCCCAG 60.742 66.667 8.75 0.00 41.49 4.45
605 606 2.430367 GGGTCTTTGACGCCCAGT 59.570 61.111 3.79 0.00 41.93 4.00
606 607 1.228154 GGGTCTTTGACGCCCAGTT 60.228 57.895 3.79 0.00 41.93 3.16
607 608 1.235281 GGGTCTTTGACGCCCAGTTC 61.235 60.000 3.79 0.00 41.93 3.01
608 609 0.250338 GGTCTTTGACGCCCAGTTCT 60.250 55.000 0.00 0.00 32.65 3.01
609 610 1.594331 GTCTTTGACGCCCAGTTCTT 58.406 50.000 0.00 0.00 0.00 2.52
610 611 1.531578 GTCTTTGACGCCCAGTTCTTC 59.468 52.381 0.00 0.00 0.00 2.87
611 612 1.416401 TCTTTGACGCCCAGTTCTTCT 59.584 47.619 0.00 0.00 0.00 2.85
612 613 2.631062 TCTTTGACGCCCAGTTCTTCTA 59.369 45.455 0.00 0.00 0.00 2.10
613 614 2.450609 TTGACGCCCAGTTCTTCTAC 57.549 50.000 0.00 0.00 0.00 2.59
614 615 0.242825 TGACGCCCAGTTCTTCTACG 59.757 55.000 0.00 0.00 0.00 3.51
615 616 0.458025 GACGCCCAGTTCTTCTACGG 60.458 60.000 0.00 0.00 0.00 4.02
616 617 1.810030 CGCCCAGTTCTTCTACGGC 60.810 63.158 0.00 0.00 37.39 5.68
617 618 1.810030 GCCCAGTTCTTCTACGGCG 60.810 63.158 4.80 4.80 33.21 6.46
748 749 8.091449 TCAATAAAAATAAATGACCGGTTTGCT 58.909 29.630 9.42 0.00 0.00 3.91
952 957 2.358737 CTGCCGCCGGAGTTCTTT 60.359 61.111 7.68 0.00 0.00 2.52
955 960 3.431725 CCGCCGGAGTTCTTTGCC 61.432 66.667 5.05 0.00 0.00 4.52
956 961 3.788766 CGCCGGAGTTCTTTGCCG 61.789 66.667 5.05 0.00 44.42 5.69
957 962 4.103103 GCCGGAGTTCTTTGCCGC 62.103 66.667 5.05 0.00 43.52 6.53
958 963 2.358737 CCGGAGTTCTTTGCCGCT 60.359 61.111 0.00 0.00 43.52 5.52
959 964 2.680913 CCGGAGTTCTTTGCCGCTG 61.681 63.158 0.00 0.00 43.52 5.18
978 988 4.016706 CGGAGGCACGGTTCCCTT 62.017 66.667 0.00 0.00 0.00 3.95
1000 1010 0.249447 CGCCATAGAAGATGCCGTCA 60.249 55.000 0.00 0.00 0.00 4.35
1298 1325 4.344679 TGTTGCATTTGAAGGAAAGGACAT 59.655 37.500 0.00 0.00 0.00 3.06
1301 1328 4.344679 TGCATTTGAAGGAAAGGACATTGT 59.655 37.500 0.00 0.00 0.00 2.71
1397 1444 5.704978 TCTGCAGATTGTTGTAATTGCTGTA 59.295 36.000 13.74 0.00 33.83 2.74
1752 1810 6.530019 TCTGCAAGTATGACTGAATCACTA 57.470 37.500 0.00 0.00 35.91 2.74
1798 1856 9.897744 TTTTGAAGTTAGCATATTTCTGTTCTG 57.102 29.630 0.00 0.00 0.00 3.02
1799 1857 8.846943 TTGAAGTTAGCATATTTCTGTTCTGA 57.153 30.769 0.00 0.00 0.00 3.27
1800 1858 8.846943 TGAAGTTAGCATATTTCTGTTCTGAA 57.153 30.769 0.00 0.00 0.00 3.02
1801 1859 9.283768 TGAAGTTAGCATATTTCTGTTCTGAAA 57.716 29.630 7.17 7.17 39.79 2.69
1805 1863 9.899226 GTTAGCATATTTCTGTTCTGAAAAAGT 57.101 29.630 8.44 0.00 39.08 2.66
1807 1865 7.301054 AGCATATTTCTGTTCTGAAAAAGTCG 58.699 34.615 8.44 0.00 39.08 4.18
1808 1866 7.173218 AGCATATTTCTGTTCTGAAAAAGTCGA 59.827 33.333 8.44 0.00 39.08 4.20
1809 1867 7.479916 GCATATTTCTGTTCTGAAAAAGTCGAG 59.520 37.037 8.44 0.00 39.08 4.04
1810 1868 5.734855 TTTCTGTTCTGAAAAAGTCGAGG 57.265 39.130 0.00 0.00 33.59 4.63
1811 1869 4.402056 TCTGTTCTGAAAAAGTCGAGGT 57.598 40.909 0.00 0.00 0.00 3.85
1812 1870 5.524971 TCTGTTCTGAAAAAGTCGAGGTA 57.475 39.130 0.00 0.00 0.00 3.08
1813 1871 6.097915 TCTGTTCTGAAAAAGTCGAGGTAT 57.902 37.500 0.00 0.00 0.00 2.73
1814 1872 6.522054 TCTGTTCTGAAAAAGTCGAGGTATT 58.478 36.000 0.00 0.00 0.00 1.89
1815 1873 6.990349 TCTGTTCTGAAAAAGTCGAGGTATTT 59.010 34.615 0.00 0.00 0.00 1.40
1816 1874 7.170998 TCTGTTCTGAAAAAGTCGAGGTATTTC 59.829 37.037 0.00 0.00 0.00 2.17
1817 1875 6.073980 TGTTCTGAAAAAGTCGAGGTATTTCG 60.074 38.462 0.00 0.00 41.79 3.46
1818 1876 5.775686 TCTGAAAAAGTCGAGGTATTTCGA 58.224 37.500 0.00 0.00 46.41 3.71
1827 1885 4.487948 TCGAGGTATTTCGAATCGTTTGT 58.512 39.130 15.40 0.00 45.69 2.83
1828 1886 4.925054 TCGAGGTATTTCGAATCGTTTGTT 59.075 37.500 15.40 0.00 45.69 2.83
1829 1887 5.013236 CGAGGTATTTCGAATCGTTTGTTG 58.987 41.667 9.38 0.00 43.03 3.33
1830 1888 5.164031 CGAGGTATTTCGAATCGTTTGTTGA 60.164 40.000 9.38 0.00 43.03 3.18
1831 1889 5.923665 AGGTATTTCGAATCGTTTGTTGAC 58.076 37.500 1.52 0.00 0.00 3.18
1832 1890 5.467399 AGGTATTTCGAATCGTTTGTTGACA 59.533 36.000 1.52 0.00 0.00 3.58
1833 1891 5.562623 GGTATTTCGAATCGTTTGTTGACAC 59.437 40.000 1.52 0.00 0.00 3.67
1834 1892 2.914816 TCGAATCGTTTGTTGACACG 57.085 45.000 1.52 0.00 37.77 4.49
1835 1893 1.523515 TCGAATCGTTTGTTGACACGG 59.476 47.619 1.52 0.00 37.02 4.94
1836 1894 1.523515 CGAATCGTTTGTTGACACGGA 59.476 47.619 0.00 0.00 37.02 4.69
1837 1895 2.658224 CGAATCGTTTGTTGACACGGAC 60.658 50.000 0.00 0.00 37.02 4.79
1838 1896 1.942677 ATCGTTTGTTGACACGGACA 58.057 45.000 0.00 0.00 37.02 4.02
1839 1897 1.723220 TCGTTTGTTGACACGGACAA 58.277 45.000 0.00 0.00 37.02 3.18
1840 1898 2.074576 TCGTTTGTTGACACGGACAAA 58.925 42.857 0.75 0.75 41.84 2.83
1841 1899 2.483106 TCGTTTGTTGACACGGACAAAA 59.517 40.909 5.68 0.00 44.53 2.44
1842 1900 2.843643 CGTTTGTTGACACGGACAAAAG 59.156 45.455 5.68 4.66 44.53 2.27
1843 1901 3.668491 CGTTTGTTGACACGGACAAAAGT 60.668 43.478 5.68 0.00 44.53 2.66
1844 1902 4.231439 GTTTGTTGACACGGACAAAAGTT 58.769 39.130 5.68 0.00 44.53 2.66
1845 1903 4.506886 TTGTTGACACGGACAAAAGTTT 57.493 36.364 0.00 0.00 33.19 2.66
1846 1904 5.624344 TTGTTGACACGGACAAAAGTTTA 57.376 34.783 0.00 0.00 33.19 2.01
1847 1905 5.224562 TGTTGACACGGACAAAAGTTTAG 57.775 39.130 0.00 0.00 0.00 1.85
1848 1906 4.936411 TGTTGACACGGACAAAAGTTTAGA 59.064 37.500 0.00 0.00 0.00 2.10
1849 1907 5.587043 TGTTGACACGGACAAAAGTTTAGAT 59.413 36.000 0.00 0.00 0.00 1.98
1850 1908 5.917541 TGACACGGACAAAAGTTTAGATC 57.082 39.130 0.00 0.00 0.00 2.75
1851 1909 5.361427 TGACACGGACAAAAGTTTAGATCA 58.639 37.500 0.00 0.00 0.00 2.92
1852 1910 5.465390 TGACACGGACAAAAGTTTAGATCAG 59.535 40.000 0.00 0.00 0.00 2.90
1853 1911 4.755123 ACACGGACAAAAGTTTAGATCAGG 59.245 41.667 0.00 0.00 0.00 3.86
1854 1912 4.154195 CACGGACAAAAGTTTAGATCAGGG 59.846 45.833 0.00 0.00 0.00 4.45
1855 1913 4.041198 ACGGACAAAAGTTTAGATCAGGGA 59.959 41.667 0.00 0.00 0.00 4.20
1856 1914 5.001232 CGGACAAAAGTTTAGATCAGGGAA 58.999 41.667 0.00 0.00 0.00 3.97
1857 1915 5.648092 CGGACAAAAGTTTAGATCAGGGAAT 59.352 40.000 0.00 0.00 0.00 3.01
1858 1916 6.821665 CGGACAAAAGTTTAGATCAGGGAATA 59.178 38.462 0.00 0.00 0.00 1.75
1859 1917 7.201617 CGGACAAAAGTTTAGATCAGGGAATAC 60.202 40.741 0.00 0.00 0.00 1.89
1860 1918 7.067129 GGACAAAAGTTTAGATCAGGGAATACC 59.933 40.741 0.00 0.00 40.67 2.73
1872 1930 2.251409 GGAATACCCTAGGTTTCGGC 57.749 55.000 8.29 0.00 37.09 5.54
1873 1931 1.767088 GGAATACCCTAGGTTTCGGCT 59.233 52.381 8.29 0.00 37.09 5.52
1874 1932 2.172082 GGAATACCCTAGGTTTCGGCTT 59.828 50.000 8.29 0.00 37.09 4.35
1875 1933 3.371273 GGAATACCCTAGGTTTCGGCTTT 60.371 47.826 8.29 0.00 37.09 3.51
1876 1934 4.267536 GAATACCCTAGGTTTCGGCTTTT 58.732 43.478 8.29 0.00 37.09 2.27
1877 1935 2.670019 ACCCTAGGTTTCGGCTTTTT 57.330 45.000 8.29 0.00 27.29 1.94
1878 1936 2.511659 ACCCTAGGTTTCGGCTTTTTC 58.488 47.619 8.29 0.00 27.29 2.29
1879 1937 1.816835 CCCTAGGTTTCGGCTTTTTCC 59.183 52.381 8.29 0.00 0.00 3.13
1880 1938 2.510613 CCTAGGTTTCGGCTTTTTCCA 58.489 47.619 0.00 0.00 0.00 3.53
1881 1939 2.488153 CCTAGGTTTCGGCTTTTTCCAG 59.512 50.000 0.00 0.00 0.00 3.86
1882 1940 1.328279 AGGTTTCGGCTTTTTCCAGG 58.672 50.000 0.00 0.00 0.00 4.45
1883 1941 0.319555 GGTTTCGGCTTTTTCCAGGC 60.320 55.000 0.00 0.00 35.98 4.85
1884 1942 0.319555 GTTTCGGCTTTTTCCAGGCC 60.320 55.000 0.00 0.00 42.18 5.19
1885 1943 1.468506 TTTCGGCTTTTTCCAGGCCC 61.469 55.000 0.00 0.00 42.58 5.80
1886 1944 2.600173 CGGCTTTTTCCAGGCCCA 60.600 61.111 0.00 0.00 42.58 5.36
1887 1945 2.639327 CGGCTTTTTCCAGGCCCAG 61.639 63.158 0.00 0.00 42.58 4.45
1888 1946 2.659016 GCTTTTTCCAGGCCCAGC 59.341 61.111 0.00 0.00 0.00 4.85
1909 1967 1.750778 CCACCAGGGATTTCCAAATCG 59.249 52.381 6.05 0.00 44.43 3.34
1910 1968 2.446435 CACCAGGGATTTCCAAATCGT 58.554 47.619 6.05 0.00 44.43 3.73
1911 1969 2.825532 CACCAGGGATTTCCAAATCGTT 59.174 45.455 6.05 0.00 44.43 3.85
1912 1970 4.013728 CACCAGGGATTTCCAAATCGTTA 58.986 43.478 6.05 0.00 44.43 3.18
1913 1971 4.096382 CACCAGGGATTTCCAAATCGTTAG 59.904 45.833 6.05 0.00 44.43 2.34
1914 1972 3.066760 CCAGGGATTTCCAAATCGTTAGC 59.933 47.826 6.05 0.00 44.43 3.09
1915 1973 2.943033 AGGGATTTCCAAATCGTTAGCG 59.057 45.455 6.05 0.00 44.43 4.26
1916 1974 2.032924 GGGATTTCCAAATCGTTAGCGG 59.967 50.000 0.00 0.00 44.43 5.52
1917 1975 2.540973 GGATTTCCAAATCGTTAGCGGC 60.541 50.000 0.00 0.00 44.43 6.53
1918 1976 0.444651 TTTCCAAATCGTTAGCGGCG 59.555 50.000 0.51 0.51 38.89 6.46
1919 1977 1.363145 TTCCAAATCGTTAGCGGCGG 61.363 55.000 9.78 0.00 38.89 6.13
1920 1978 2.707039 CAAATCGTTAGCGGCGGG 59.293 61.111 9.78 0.00 38.89 6.13
1952 2010 5.130975 ACTTGATGCAGGATGGTATTGACTA 59.869 40.000 0.00 0.00 35.86 2.59
2084 2142 7.497249 CCATGAGAAGTATAAGAAAGAGTTGGG 59.503 40.741 0.00 0.00 0.00 4.12
2108 2166 5.404946 CAAGGTGAACAAGCAATTGGATAG 58.595 41.667 7.72 0.00 0.00 2.08
2123 2181 3.736094 TGGATAGACTTGGGGATCAGTT 58.264 45.455 0.00 0.00 0.00 3.16
2170 2228 4.646040 CCAAGATGTTTGATTGGGCAGATA 59.354 41.667 0.00 0.00 39.87 1.98
2792 2854 1.140134 TTTAGGGTGGCTTGGGCTCT 61.140 55.000 0.00 0.00 38.73 4.09
2804 2921 0.111639 TGGGCTCTACAAAACCACCC 59.888 55.000 0.00 0.00 36.36 4.61
2805 2922 0.111639 GGGCTCTACAAAACCACCCA 59.888 55.000 0.00 0.00 35.84 4.51
2810 3514 3.383505 GCTCTACAAAACCACCCAAAACT 59.616 43.478 0.00 0.00 0.00 2.66
2812 3516 5.243060 GCTCTACAAAACCACCCAAAACTAT 59.757 40.000 0.00 0.00 0.00 2.12
2820 3524 6.850752 AACCACCCAAAACTATCATTTAGG 57.149 37.500 0.00 0.00 0.00 2.69
2824 3528 6.070824 CCACCCAAAACTATCATTTAGGCTTT 60.071 38.462 0.00 0.00 0.00 3.51
2826 3530 7.331687 CACCCAAAACTATCATTTAGGCTTTTG 59.668 37.037 0.00 0.00 0.00 2.44
2827 3531 7.234577 ACCCAAAACTATCATTTAGGCTTTTGA 59.765 33.333 0.00 0.00 31.65 2.69
2934 3856 1.260544 AATCTTCAAGGTGGCTTGGC 58.739 50.000 0.00 0.00 35.23 4.52
2954 3876 1.804748 CCTCGACAAAGCCACCTAAAC 59.195 52.381 0.00 0.00 0.00 2.01
2999 3980 1.527380 GGGCTCGACAAAACCACCA 60.527 57.895 0.00 0.00 0.00 4.17
3031 4012 1.260544 AATCTTCAAGGTGGCTTGGC 58.739 50.000 0.00 0.00 35.23 4.52
3051 4180 1.804748 CCTCGACAAAGCCACCTAAAC 59.195 52.381 0.00 0.00 0.00 2.01
3073 4202 8.738645 AAACCTATCATTTAGGCTTTAGAGTG 57.261 34.615 0.00 0.00 38.25 3.51
3074 4203 6.831976 ACCTATCATTTAGGCTTTAGAGTGG 58.168 40.000 0.00 0.00 38.25 4.00
3075 4204 5.703130 CCTATCATTTAGGCTTTAGAGTGGC 59.297 44.000 0.00 0.00 0.00 5.01
3076 4205 4.844349 TCATTTAGGCTTTAGAGTGGCT 57.156 40.909 0.00 0.00 41.91 4.75
3077 4206 5.179452 TCATTTAGGCTTTAGAGTGGCTT 57.821 39.130 0.00 0.00 39.76 4.35
3078 4207 4.943705 TCATTTAGGCTTTAGAGTGGCTTG 59.056 41.667 0.00 0.00 39.76 4.01
3079 4208 3.350219 TTAGGCTTTAGAGTGGCTTGG 57.650 47.619 0.00 0.00 39.76 3.61
3080 4209 1.362224 AGGCTTTAGAGTGGCTTGGA 58.638 50.000 0.00 0.00 35.50 3.53
3081 4210 1.003696 AGGCTTTAGAGTGGCTTGGAC 59.996 52.381 0.00 0.00 35.50 4.02
3082 4211 1.003696 GGCTTTAGAGTGGCTTGGACT 59.996 52.381 0.00 0.00 0.00 3.85
3083 4212 2.351455 GCTTTAGAGTGGCTTGGACTC 58.649 52.381 0.00 0.00 40.25 3.36
3084 4213 2.611518 CTTTAGAGTGGCTTGGACTCG 58.388 52.381 0.00 0.00 43.95 4.18
3085 4214 1.919240 TTAGAGTGGCTTGGACTCGA 58.081 50.000 0.00 0.00 43.95 4.04
3086 4215 1.174783 TAGAGTGGCTTGGACTCGAC 58.825 55.000 0.00 0.00 43.95 4.20
3087 4216 0.827925 AGAGTGGCTTGGACTCGACA 60.828 55.000 0.00 0.00 43.95 4.35
3088 4217 0.033504 GAGTGGCTTGGACTCGACAA 59.966 55.000 0.00 0.00 31.01 3.18
3089 4218 0.468226 AGTGGCTTGGACTCGACAAA 59.532 50.000 0.00 0.00 0.00 2.83
3090 4219 1.134220 AGTGGCTTGGACTCGACAAAA 60.134 47.619 0.00 0.00 0.00 2.44
3091 4220 1.002792 GTGGCTTGGACTCGACAAAAC 60.003 52.381 0.00 0.00 0.00 2.43
3092 4221 0.591659 GGCTTGGACTCGACAAAACC 59.408 55.000 0.00 0.00 0.00 3.27
3399 4528 6.530019 CAAAGCCACCTAAACCTATCATTT 57.470 37.500 0.00 0.00 0.00 2.32
3400 4529 7.639113 CAAAGCCACCTAAACCTATCATTTA 57.361 36.000 0.00 0.00 0.00 1.40
3401 4530 7.707104 CAAAGCCACCTAAACCTATCATTTAG 58.293 38.462 0.00 0.00 38.73 1.85
3402 4531 5.377478 AGCCACCTAAACCTATCATTTAGC 58.623 41.667 0.00 0.00 38.01 3.09
3403 4532 4.519350 GCCACCTAAACCTATCATTTAGCC 59.481 45.833 0.00 0.00 38.01 3.93
3404 4533 5.690364 GCCACCTAAACCTATCATTTAGCCT 60.690 44.000 0.00 0.00 38.01 4.58
3405 4534 6.365520 CCACCTAAACCTATCATTTAGCCTT 58.634 40.000 0.00 0.00 38.01 4.35
3406 4535 6.833933 CCACCTAAACCTATCATTTAGCCTTT 59.166 38.462 0.00 0.00 38.01 3.11
3407 4536 7.996644 CCACCTAAACCTATCATTTAGCCTTTA 59.003 37.037 0.00 0.00 38.01 1.85
3435 4564 2.265904 GGGCTCGACAAAACCACCC 61.266 63.158 0.00 0.00 0.00 4.61
3447 4674 2.777459 AACCACCCAAACCACCATTA 57.223 45.000 0.00 0.00 0.00 1.90
3465 4692 5.185828 ACCATTAAATCTTCAAGGTGGCTTC 59.814 40.000 0.00 0.00 0.00 3.86
3466 4693 5.185635 CCATTAAATCTTCAAGGTGGCTTCA 59.814 40.000 0.00 0.00 0.00 3.02
3487 4715 1.877443 GCTCGACAAAGCCACCTAAAA 59.123 47.619 0.00 0.00 36.22 1.52
3504 4732 7.093771 CCACCTAAAACTATCATTCAGGCTTTT 60.094 37.037 0.00 0.00 0.00 2.27
3506 4734 7.669722 ACCTAAAACTATCATTCAGGCTTTTGA 59.330 33.333 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 0.944311 GCCACGTGCTATACCCGATG 60.944 60.000 10.91 0.00 36.87 3.84
14 15 1.366366 GCCACGTGCTATACCCGAT 59.634 57.895 10.91 0.00 36.87 4.18
16 17 2.657296 CGCCACGTGCTATACCCG 60.657 66.667 10.91 0.00 38.05 5.28
19 20 1.564622 CATGCGCCACGTGCTATAC 59.435 57.895 10.91 0.00 40.03 1.47
43 44 0.548989 ACCTAACTGTGTTGTGGGCA 59.451 50.000 0.00 0.00 0.00 5.36
45 46 1.544759 GGGACCTAACTGTGTTGTGGG 60.545 57.143 0.00 0.00 0.00 4.61
48 49 0.250166 GCGGGACCTAACTGTGTTGT 60.250 55.000 0.00 0.00 0.00 3.32
55 56 0.321653 CAAAGCTGCGGGACCTAACT 60.322 55.000 0.00 0.00 0.00 2.24
58 59 1.295423 GTCAAAGCTGCGGGACCTA 59.705 57.895 9.28 0.00 0.00 3.08
100 101 2.433868 TTGACACGAAGTAGCAGACC 57.566 50.000 0.00 0.00 41.61 3.85
113 114 2.660900 GCGTTGTCGTGGTATTTGACAC 60.661 50.000 0.00 0.00 41.93 3.67
114 115 1.527736 GCGTTGTCGTGGTATTTGACA 59.472 47.619 0.00 0.00 40.62 3.58
115 116 1.461237 CGCGTTGTCGTGGTATTTGAC 60.461 52.381 0.00 0.00 42.82 3.18
116 117 0.785378 CGCGTTGTCGTGGTATTTGA 59.215 50.000 0.00 0.00 42.82 2.69
118 119 1.065358 CTCGCGTTGTCGTGGTATTT 58.935 50.000 5.77 0.00 45.94 1.40
121 122 2.256158 CCTCGCGTTGTCGTGGTA 59.744 61.111 5.77 0.00 45.94 3.25
142 143 2.203070 GCTATGGACGCCAGGGTG 60.203 66.667 4.90 0.00 36.75 4.61
165 166 0.322008 GTTCCTCAACAGCTCCAGGG 60.322 60.000 0.00 0.00 32.14 4.45
166 167 0.671781 CGTTCCTCAACAGCTCCAGG 60.672 60.000 0.00 0.00 32.14 4.45
167 168 0.318441 TCGTTCCTCAACAGCTCCAG 59.682 55.000 0.00 0.00 32.14 3.86
168 169 0.318441 CTCGTTCCTCAACAGCTCCA 59.682 55.000 0.00 0.00 32.14 3.86
169 170 0.603569 TCTCGTTCCTCAACAGCTCC 59.396 55.000 0.00 0.00 32.14 4.70
170 171 1.670380 GGTCTCGTTCCTCAACAGCTC 60.670 57.143 0.00 0.00 32.14 4.09
178 179 1.424635 CTCGTCGGTCTCGTTCCTC 59.575 63.158 0.00 0.00 37.69 3.71
179 180 2.039405 CCTCGTCGGTCTCGTTCCT 61.039 63.158 0.00 0.00 37.69 3.36
209 210 1.452651 CAATCCTGATGCTGGCCGT 60.453 57.895 0.00 0.00 0.00 5.68
211 212 1.442526 CGTCAATCCTGATGCTGGCC 61.443 60.000 0.00 0.00 33.05 5.36
218 219 1.065418 GGTGGGTTCGTCAATCCTGAT 60.065 52.381 0.00 0.00 33.24 2.90
221 222 1.295423 CGGTGGGTTCGTCAATCCT 59.705 57.895 0.00 0.00 33.24 3.24
277 278 2.434359 GGAAAGACGTGGGGCTCG 60.434 66.667 0.00 0.00 0.00 5.03
281 282 3.622060 ATGCCGGAAAGACGTGGGG 62.622 63.158 5.05 0.00 0.00 4.96
283 284 2.398554 CCATGCCGGAAAGACGTGG 61.399 63.158 5.05 3.89 36.56 4.94
287 288 0.394352 ATGGACCATGCCGGAAAGAC 60.394 55.000 5.05 0.00 38.63 3.01
288 289 0.394216 CATGGACCATGCCGGAAAGA 60.394 55.000 21.35 0.00 35.02 2.52
292 293 1.995066 ACTCATGGACCATGCCGGA 60.995 57.895 27.02 11.01 41.18 5.14
295 296 3.518003 GCACTCATGGACCATGCC 58.482 61.111 27.02 12.60 41.18 4.40
298 299 1.221840 GACGGCACTCATGGACCAT 59.778 57.895 0.00 0.00 0.00 3.55
340 341 4.292208 TTGTGCTGCACGAACGCG 62.292 61.111 25.88 3.53 44.79 6.01
341 342 2.373524 TTCTTGTGCTGCACGAACGC 62.374 55.000 25.88 3.52 37.14 4.84
353 354 1.059692 CATGACGTAGCGCTTCTTGTG 59.940 52.381 18.68 4.52 0.00 3.33
354 355 1.350193 CATGACGTAGCGCTTCTTGT 58.650 50.000 18.68 9.44 0.00 3.16
355 356 0.647410 CCATGACGTAGCGCTTCTTG 59.353 55.000 18.68 15.39 0.00 3.02
356 357 0.530744 TCCATGACGTAGCGCTTCTT 59.469 50.000 18.68 3.12 0.00 2.52
357 358 0.179134 GTCCATGACGTAGCGCTTCT 60.179 55.000 18.68 0.00 0.00 2.85
358 359 2.288969 GTCCATGACGTAGCGCTTC 58.711 57.895 18.68 10.36 0.00 3.86
359 360 4.496670 GTCCATGACGTAGCGCTT 57.503 55.556 18.68 0.00 0.00 4.68
368 369 0.737715 GTGAGGCAGTCGTCCATGAC 60.738 60.000 0.00 0.00 39.21 3.06
369 370 1.591703 GTGAGGCAGTCGTCCATGA 59.408 57.895 0.00 0.00 0.00 3.07
370 371 1.448540 GGTGAGGCAGTCGTCCATG 60.449 63.158 0.00 0.00 0.00 3.66
371 372 2.982130 GGTGAGGCAGTCGTCCAT 59.018 61.111 0.00 0.00 0.00 3.41
372 373 3.680786 CGGTGAGGCAGTCGTCCA 61.681 66.667 0.00 0.00 0.00 4.02
373 374 3.681835 ACGGTGAGGCAGTCGTCC 61.682 66.667 0.00 0.00 0.00 4.79
374 375 2.430921 CACGGTGAGGCAGTCGTC 60.431 66.667 0.74 0.00 33.31 4.20
375 376 4.664677 GCACGGTGAGGCAGTCGT 62.665 66.667 13.29 0.00 36.19 4.34
376 377 4.662961 TGCACGGTGAGGCAGTCG 62.663 66.667 13.29 0.00 34.58 4.18
377 378 3.044305 GTGCACGGTGAGGCAGTC 61.044 66.667 13.29 0.00 41.35 3.51
378 379 3.550431 AGTGCACGGTGAGGCAGT 61.550 61.111 13.29 2.71 41.35 4.40
379 380 3.046087 CAGTGCACGGTGAGGCAG 61.046 66.667 13.29 0.00 41.35 4.85
381 382 4.996434 AGCAGTGCACGGTGAGGC 62.996 66.667 19.20 12.51 0.00 4.70
382 383 2.740055 GAGCAGTGCACGGTGAGG 60.740 66.667 19.20 3.43 0.00 3.86
383 384 2.740055 GGAGCAGTGCACGGTGAG 60.740 66.667 19.20 5.51 0.00 3.51
384 385 4.662961 CGGAGCAGTGCACGGTGA 62.663 66.667 19.20 0.00 0.00 4.02
385 386 4.969196 ACGGAGCAGTGCACGGTG 62.969 66.667 27.91 10.17 36.00 4.94
386 387 4.664677 GACGGAGCAGTGCACGGT 62.665 66.667 27.91 25.28 35.77 4.83
388 389 4.700365 TCGACGGAGCAGTGCACG 62.700 66.667 24.57 24.57 37.26 5.34
389 390 2.807045 CTCGACGGAGCAGTGCAC 60.807 66.667 19.20 9.40 32.61 4.57
390 391 4.056125 CCTCGACGGAGCAGTGCA 62.056 66.667 19.20 0.00 39.06 4.57
391 392 3.973267 GACCTCGACGGAGCAGTGC 62.973 68.421 7.13 7.13 39.06 4.40
392 393 2.179517 GACCTCGACGGAGCAGTG 59.820 66.667 7.76 0.00 39.06 3.66
393 394 3.063084 GGACCTCGACGGAGCAGT 61.063 66.667 7.76 0.00 39.06 4.40
394 395 2.752238 AGGACCTCGACGGAGCAG 60.752 66.667 7.76 0.00 39.06 4.24
395 396 2.750637 GAGGACCTCGACGGAGCA 60.751 66.667 5.55 0.00 39.06 4.26
396 397 2.272918 CTTGAGGACCTCGACGGAGC 62.273 65.000 16.81 0.00 39.06 4.70
397 398 1.658686 CCTTGAGGACCTCGACGGAG 61.659 65.000 16.81 8.85 37.43 4.63
398 399 1.677966 CCTTGAGGACCTCGACGGA 60.678 63.158 16.81 0.00 37.39 4.69
399 400 1.658686 CTCCTTGAGGACCTCGACGG 61.659 65.000 16.81 16.32 39.78 4.79
400 401 1.803943 CTCCTTGAGGACCTCGACG 59.196 63.158 16.81 8.99 39.78 5.12
410 411 2.492090 CGCGGACTCCTCCTTGAG 59.508 66.667 0.00 0.00 38.37 3.02
411 412 3.068691 CCGCGGACTCCTCCTTGA 61.069 66.667 24.07 0.00 33.79 3.02
412 413 3.068691 TCCGCGGACTCCTCCTTG 61.069 66.667 27.28 0.00 33.79 3.61
413 414 3.069318 GTCCGCGGACTCCTCCTT 61.069 66.667 43.32 0.00 41.57 3.36
427 428 3.920093 CTTCCTTGTGGCCCCGTCC 62.920 68.421 0.00 0.00 0.00 4.79
428 429 1.833787 TACTTCCTTGTGGCCCCGTC 61.834 60.000 0.00 0.00 0.00 4.79
429 430 1.844289 TACTTCCTTGTGGCCCCGT 60.844 57.895 0.00 0.00 0.00 5.28
430 431 1.376812 GTACTTCCTTGTGGCCCCG 60.377 63.158 0.00 0.00 0.00 5.73
431 432 0.331616 ATGTACTTCCTTGTGGCCCC 59.668 55.000 0.00 0.00 0.00 5.80
432 433 1.463674 CATGTACTTCCTTGTGGCCC 58.536 55.000 0.00 0.00 0.00 5.80
433 434 1.271926 ACCATGTACTTCCTTGTGGCC 60.272 52.381 0.00 0.00 0.00 5.36
434 435 2.084546 GACCATGTACTTCCTTGTGGC 58.915 52.381 0.00 0.00 0.00 5.01
435 436 2.346803 CGACCATGTACTTCCTTGTGG 58.653 52.381 0.00 0.00 0.00 4.17
436 437 2.346803 CCGACCATGTACTTCCTTGTG 58.653 52.381 0.00 0.00 0.00 3.33
437 438 1.338769 GCCGACCATGTACTTCCTTGT 60.339 52.381 0.00 0.00 0.00 3.16
438 439 1.338674 TGCCGACCATGTACTTCCTTG 60.339 52.381 0.00 0.00 0.00 3.61
439 440 0.981183 TGCCGACCATGTACTTCCTT 59.019 50.000 0.00 0.00 0.00 3.36
440 441 1.134401 CATGCCGACCATGTACTTCCT 60.134 52.381 7.58 0.00 45.05 3.36
441 442 1.299541 CATGCCGACCATGTACTTCC 58.700 55.000 7.58 0.00 45.05 3.46
470 471 3.827898 GTCGTGGGAGAGGCTCGG 61.828 72.222 9.22 0.00 0.00 4.63
471 472 2.343163 GATGTCGTGGGAGAGGCTCG 62.343 65.000 9.22 0.00 0.00 5.03
472 473 1.439644 GATGTCGTGGGAGAGGCTC 59.560 63.158 6.34 6.34 0.00 4.70
473 474 2.060980 GGATGTCGTGGGAGAGGCT 61.061 63.158 0.00 0.00 0.00 4.58
474 475 2.359169 TGGATGTCGTGGGAGAGGC 61.359 63.158 0.00 0.00 0.00 4.70
475 476 1.257750 TGTGGATGTCGTGGGAGAGG 61.258 60.000 0.00 0.00 0.00 3.69
476 477 0.174389 CTGTGGATGTCGTGGGAGAG 59.826 60.000 0.00 0.00 0.00 3.20
477 478 1.257750 CCTGTGGATGTCGTGGGAGA 61.258 60.000 0.00 0.00 0.00 3.71
478 479 1.219124 CCTGTGGATGTCGTGGGAG 59.781 63.158 0.00 0.00 0.00 4.30
479 480 2.954684 GCCTGTGGATGTCGTGGGA 61.955 63.158 0.00 0.00 0.00 4.37
480 481 1.613317 TAGCCTGTGGATGTCGTGGG 61.613 60.000 0.00 0.00 0.00 4.61
481 482 0.460284 GTAGCCTGTGGATGTCGTGG 60.460 60.000 0.00 0.00 0.00 4.94
482 483 0.802222 CGTAGCCTGTGGATGTCGTG 60.802 60.000 0.00 0.00 0.00 4.35
483 484 1.511305 CGTAGCCTGTGGATGTCGT 59.489 57.895 0.00 0.00 0.00 4.34
484 485 1.226974 CCGTAGCCTGTGGATGTCG 60.227 63.158 0.00 0.00 0.00 4.35
485 486 1.521681 GCCGTAGCCTGTGGATGTC 60.522 63.158 0.00 0.00 0.00 3.06
486 487 2.244117 CTGCCGTAGCCTGTGGATGT 62.244 60.000 0.00 0.00 38.69 3.06
487 488 1.522355 CTGCCGTAGCCTGTGGATG 60.522 63.158 0.00 0.00 38.69 3.51
488 489 2.735772 CCTGCCGTAGCCTGTGGAT 61.736 63.158 0.00 0.00 38.69 3.41
489 490 3.390521 CCTGCCGTAGCCTGTGGA 61.391 66.667 0.00 0.00 38.69 4.02
490 491 3.390521 TCCTGCCGTAGCCTGTGG 61.391 66.667 0.00 0.00 38.69 4.17
491 492 2.125512 GTCCTGCCGTAGCCTGTG 60.126 66.667 0.00 0.00 38.69 3.66
492 493 1.990060 ATGTCCTGCCGTAGCCTGT 60.990 57.895 0.00 0.00 38.69 4.00
493 494 1.522355 CATGTCCTGCCGTAGCCTG 60.522 63.158 0.00 0.00 38.69 4.85
494 495 1.990060 ACATGTCCTGCCGTAGCCT 60.990 57.895 0.00 0.00 38.69 4.58
495 496 1.815421 CACATGTCCTGCCGTAGCC 60.815 63.158 0.00 0.00 38.69 3.93
496 497 1.815421 CCACATGTCCTGCCGTAGC 60.815 63.158 0.00 0.00 40.48 3.58
497 498 0.740868 CACCACATGTCCTGCCGTAG 60.741 60.000 0.00 0.00 0.00 3.51
498 499 1.295101 CACCACATGTCCTGCCGTA 59.705 57.895 0.00 0.00 0.00 4.02
499 500 2.032528 CACCACATGTCCTGCCGT 59.967 61.111 0.00 0.00 0.00 5.68
500 501 2.747460 CCACCACATGTCCTGCCG 60.747 66.667 0.00 0.00 0.00 5.69
501 502 3.064324 GCCACCACATGTCCTGCC 61.064 66.667 0.00 0.00 0.00 4.85
502 503 3.064324 GGCCACCACATGTCCTGC 61.064 66.667 0.00 0.00 0.00 4.85
503 504 1.676635 CAGGCCACCACATGTCCTG 60.677 63.158 14.21 14.21 38.41 3.86
504 505 1.210204 ATCAGGCCACCACATGTCCT 61.210 55.000 5.01 0.00 0.00 3.85
505 506 1.033746 CATCAGGCCACCACATGTCC 61.034 60.000 5.01 0.00 0.00 4.02
506 507 0.322816 ACATCAGGCCACCACATGTC 60.323 55.000 5.01 0.00 0.00 3.06
507 508 0.322816 GACATCAGGCCACCACATGT 60.323 55.000 5.01 5.08 32.86 3.21
508 509 0.322726 TGACATCAGGCCACCACATG 60.323 55.000 5.01 1.48 0.00 3.21
509 510 0.322816 GTGACATCAGGCCACCACAT 60.323 55.000 5.01 0.00 0.00 3.21
510 511 1.073025 GTGACATCAGGCCACCACA 59.927 57.895 5.01 0.00 0.00 4.17
511 512 2.034879 CGTGACATCAGGCCACCAC 61.035 63.158 5.01 2.34 0.00 4.16
512 513 2.050836 AACGTGACATCAGGCCACCA 62.051 55.000 5.01 0.00 35.33 4.17
513 514 1.298859 GAACGTGACATCAGGCCACC 61.299 60.000 5.01 0.00 35.33 4.61
514 515 0.602638 TGAACGTGACATCAGGCCAC 60.603 55.000 5.01 0.00 35.33 5.01
515 516 0.602638 GTGAACGTGACATCAGGCCA 60.603 55.000 5.01 0.00 35.33 5.36
516 517 1.298859 GGTGAACGTGACATCAGGCC 61.299 60.000 0.00 0.00 35.33 5.19
517 518 1.626654 CGGTGAACGTGACATCAGGC 61.627 60.000 0.00 0.00 37.93 4.85
518 519 2.445274 CGGTGAACGTGACATCAGG 58.555 57.895 0.00 0.12 37.93 3.86
536 537 2.804090 GACCTTGGCGTCGTCGAC 60.804 66.667 15.51 15.51 46.54 4.20
537 538 4.047059 GGACCTTGGCGTCGTCGA 62.047 66.667 6.17 0.00 39.71 4.20
538 539 4.351938 TGGACCTTGGCGTCGTCG 62.352 66.667 0.00 0.00 40.37 5.12
539 540 2.432628 CTGGACCTTGGCGTCGTC 60.433 66.667 0.00 0.00 33.30 4.20
540 541 4.003788 CCTGGACCTTGGCGTCGT 62.004 66.667 0.00 0.00 33.30 4.34
546 547 4.641645 TGTGCGCCTGGACCTTGG 62.642 66.667 4.18 0.00 35.21 3.61
547 548 2.594303 TTGTGCGCCTGGACCTTG 60.594 61.111 4.18 0.00 35.21 3.61
548 549 2.281761 CTTGTGCGCCTGGACCTT 60.282 61.111 4.18 0.00 35.21 3.50
551 552 3.426568 GAGCTTGTGCGCCTGGAC 61.427 66.667 4.18 0.00 45.42 4.02
554 555 4.081030 CACGAGCTTGTGCGCCTG 62.081 66.667 21.00 0.00 45.42 4.85
581 582 2.019951 CGTCAAAGACCCGTGACCG 61.020 63.158 0.00 0.00 40.91 4.79
582 583 2.315386 GCGTCAAAGACCCGTGACC 61.315 63.158 0.00 0.00 40.91 4.02
583 584 2.315386 GGCGTCAAAGACCCGTGAC 61.315 63.158 0.00 0.00 40.64 3.67
584 585 2.029964 GGCGTCAAAGACCCGTGA 59.970 61.111 0.00 0.00 0.00 4.35
585 586 3.047877 GGGCGTCAAAGACCCGTG 61.048 66.667 0.00 0.00 32.92 4.94
588 589 1.228154 AACTGGGCGTCAAAGACCC 60.228 57.895 0.00 0.00 44.52 4.46
589 590 0.250338 AGAACTGGGCGTCAAAGACC 60.250 55.000 0.00 0.00 40.61 3.85
590 591 1.531578 GAAGAACTGGGCGTCAAAGAC 59.468 52.381 0.00 0.00 0.00 3.01
591 592 1.416401 AGAAGAACTGGGCGTCAAAGA 59.584 47.619 0.00 0.00 0.00 2.52
592 593 1.884235 AGAAGAACTGGGCGTCAAAG 58.116 50.000 0.00 0.00 0.00 2.77
593 594 2.762745 GTAGAAGAACTGGGCGTCAAA 58.237 47.619 0.00 0.00 0.00 2.69
594 595 1.336517 CGTAGAAGAACTGGGCGTCAA 60.337 52.381 0.00 0.00 0.00 3.18
595 596 0.242825 CGTAGAAGAACTGGGCGTCA 59.757 55.000 0.00 0.00 0.00 4.35
596 597 0.458025 CCGTAGAAGAACTGGGCGTC 60.458 60.000 0.00 0.00 0.00 5.19
597 598 1.590147 CCGTAGAAGAACTGGGCGT 59.410 57.895 0.00 0.00 0.00 5.68
598 599 1.810030 GCCGTAGAAGAACTGGGCG 60.810 63.158 0.00 0.00 38.83 6.13
599 600 1.810030 CGCCGTAGAAGAACTGGGC 60.810 63.158 0.00 0.00 42.28 5.36
600 601 0.458025 GTCGCCGTAGAAGAACTGGG 60.458 60.000 0.00 0.00 0.00 4.45
601 602 0.242825 TGTCGCCGTAGAAGAACTGG 59.757 55.000 0.00 0.00 0.00 4.00
602 603 1.199327 TCTGTCGCCGTAGAAGAACTG 59.801 52.381 0.00 0.00 0.00 3.16
603 604 1.469308 CTCTGTCGCCGTAGAAGAACT 59.531 52.381 0.00 0.00 0.00 3.01
604 605 1.199558 ACTCTGTCGCCGTAGAAGAAC 59.800 52.381 0.00 0.00 0.00 3.01
605 606 1.199327 CACTCTGTCGCCGTAGAAGAA 59.801 52.381 0.00 0.00 0.00 2.52
606 607 0.803117 CACTCTGTCGCCGTAGAAGA 59.197 55.000 0.00 0.00 0.00 2.87
607 608 0.803117 TCACTCTGTCGCCGTAGAAG 59.197 55.000 0.00 0.00 0.00 2.85
608 609 1.241165 TTCACTCTGTCGCCGTAGAA 58.759 50.000 0.00 0.00 0.00 2.10
609 610 1.460504 ATTCACTCTGTCGCCGTAGA 58.539 50.000 0.00 0.00 0.00 2.59
610 611 1.920574 CAATTCACTCTGTCGCCGTAG 59.079 52.381 0.00 0.00 0.00 3.51
611 612 1.990799 CAATTCACTCTGTCGCCGTA 58.009 50.000 0.00 0.00 0.00 4.02
612 613 1.291877 GCAATTCACTCTGTCGCCGT 61.292 55.000 0.00 0.00 0.00 5.68
613 614 1.291184 TGCAATTCACTCTGTCGCCG 61.291 55.000 0.00 0.00 0.00 6.46
614 615 0.874390 TTGCAATTCACTCTGTCGCC 59.126 50.000 0.00 0.00 0.00 5.54
615 616 2.686558 TTTGCAATTCACTCTGTCGC 57.313 45.000 0.00 0.00 0.00 5.19
748 749 4.123506 TGTCAGAAATCGTGTTAACTGCA 58.876 39.130 7.22 0.00 0.00 4.41
978 988 1.754745 GGCATCTTCTATGGCGGGA 59.245 57.895 0.00 0.00 34.93 5.14
1000 1010 1.719529 CTGCTCTCCTCTCCATCCAT 58.280 55.000 0.00 0.00 0.00 3.41
1298 1325 4.080919 CACATCCATAGAACCTCCTCACAA 60.081 45.833 0.00 0.00 0.00 3.33
1301 1328 3.724478 ACACATCCATAGAACCTCCTCA 58.276 45.455 0.00 0.00 0.00 3.86
1791 1849 6.787085 AATACCTCGACTTTTTCAGAACAG 57.213 37.500 0.00 0.00 0.00 3.16
1793 1851 6.145048 TCGAAATACCTCGACTTTTTCAGAAC 59.855 38.462 0.00 0.00 42.69 3.01
1794 1852 6.218019 TCGAAATACCTCGACTTTTTCAGAA 58.782 36.000 0.00 0.00 42.69 3.02
1795 1853 5.775686 TCGAAATACCTCGACTTTTTCAGA 58.224 37.500 0.00 0.00 42.69 3.27
1796 1854 6.462073 TTCGAAATACCTCGACTTTTTCAG 57.538 37.500 0.00 0.00 46.95 3.02
1797 1855 6.183360 CGATTCGAAATACCTCGACTTTTTCA 60.183 38.462 11.63 0.00 46.95 2.69
1798 1856 6.176453 CGATTCGAAATACCTCGACTTTTTC 58.824 40.000 11.63 0.00 46.95 2.29
1799 1857 5.636543 ACGATTCGAAATACCTCGACTTTTT 59.363 36.000 21.18 0.00 46.95 1.94
1800 1858 5.166398 ACGATTCGAAATACCTCGACTTTT 58.834 37.500 21.18 0.00 46.95 2.27
1801 1859 4.741342 ACGATTCGAAATACCTCGACTTT 58.259 39.130 21.18 0.20 46.95 2.66
1802 1860 4.367386 ACGATTCGAAATACCTCGACTT 57.633 40.909 21.18 0.51 46.95 3.01
1803 1861 4.367386 AACGATTCGAAATACCTCGACT 57.633 40.909 21.18 7.95 46.95 4.18
1804 1862 4.325472 ACAAACGATTCGAAATACCTCGAC 59.675 41.667 21.18 0.00 46.95 4.20
1805 1863 4.487948 ACAAACGATTCGAAATACCTCGA 58.512 39.130 21.18 0.00 45.71 4.04
1806 1864 4.835199 ACAAACGATTCGAAATACCTCG 57.165 40.909 13.95 14.65 40.25 4.63
1807 1865 6.013689 GTCAACAAACGATTCGAAATACCTC 58.986 40.000 13.95 0.00 0.00 3.85
1808 1866 5.467399 TGTCAACAAACGATTCGAAATACCT 59.533 36.000 13.95 0.00 0.00 3.08
1809 1867 5.562623 GTGTCAACAAACGATTCGAAATACC 59.437 40.000 13.95 0.00 0.00 2.73
1810 1868 5.277449 CGTGTCAACAAACGATTCGAAATAC 59.723 40.000 13.95 0.00 42.32 1.89
1811 1869 5.367563 CGTGTCAACAAACGATTCGAAATA 58.632 37.500 13.95 0.00 42.32 1.40
1812 1870 4.208355 CGTGTCAACAAACGATTCGAAAT 58.792 39.130 13.95 0.00 42.32 2.17
1813 1871 3.544440 CCGTGTCAACAAACGATTCGAAA 60.544 43.478 13.95 0.00 42.32 3.46
1814 1872 2.033577 CCGTGTCAACAAACGATTCGAA 60.034 45.455 13.95 0.00 42.32 3.71
1815 1873 1.523515 CCGTGTCAACAAACGATTCGA 59.476 47.619 13.95 0.00 42.32 3.71
1816 1874 1.523515 TCCGTGTCAACAAACGATTCG 59.476 47.619 4.14 4.14 42.32 3.34
1817 1875 2.285756 TGTCCGTGTCAACAAACGATTC 59.714 45.455 0.00 0.00 42.32 2.52
1818 1876 2.281517 TGTCCGTGTCAACAAACGATT 58.718 42.857 0.00 0.00 42.32 3.34
1819 1877 1.942677 TGTCCGTGTCAACAAACGAT 58.057 45.000 0.00 0.00 42.32 3.73
1820 1878 1.723220 TTGTCCGTGTCAACAAACGA 58.277 45.000 0.00 0.00 42.32 3.85
1821 1879 2.529136 TTTGTCCGTGTCAACAAACG 57.471 45.000 0.00 0.00 39.70 3.60
1822 1880 3.828786 ACTTTTGTCCGTGTCAACAAAC 58.171 40.909 1.61 0.00 43.11 2.93
1823 1881 4.506886 AACTTTTGTCCGTGTCAACAAA 57.493 36.364 0.00 0.00 42.07 2.83
1824 1882 4.506886 AAACTTTTGTCCGTGTCAACAA 57.493 36.364 0.00 0.00 33.74 2.83
1825 1883 4.936411 TCTAAACTTTTGTCCGTGTCAACA 59.064 37.500 0.00 0.00 0.00 3.33
1826 1884 5.473796 TCTAAACTTTTGTCCGTGTCAAC 57.526 39.130 0.00 0.00 0.00 3.18
1827 1885 5.818336 TGATCTAAACTTTTGTCCGTGTCAA 59.182 36.000 0.00 0.00 0.00 3.18
1828 1886 5.361427 TGATCTAAACTTTTGTCCGTGTCA 58.639 37.500 0.00 0.00 0.00 3.58
1829 1887 5.107065 CCTGATCTAAACTTTTGTCCGTGTC 60.107 44.000 0.00 0.00 0.00 3.67
1830 1888 4.755123 CCTGATCTAAACTTTTGTCCGTGT 59.245 41.667 0.00 0.00 0.00 4.49
1831 1889 4.154195 CCCTGATCTAAACTTTTGTCCGTG 59.846 45.833 0.00 0.00 0.00 4.94
1832 1890 4.041198 TCCCTGATCTAAACTTTTGTCCGT 59.959 41.667 0.00 0.00 0.00 4.69
1833 1891 4.575885 TCCCTGATCTAAACTTTTGTCCG 58.424 43.478 0.00 0.00 0.00 4.79
1834 1892 7.067129 GGTATTCCCTGATCTAAACTTTTGTCC 59.933 40.741 0.00 0.00 0.00 4.02
1835 1893 7.986562 GGTATTCCCTGATCTAAACTTTTGTC 58.013 38.462 0.00 0.00 0.00 3.18
1836 1894 7.939784 GGTATTCCCTGATCTAAACTTTTGT 57.060 36.000 0.00 0.00 0.00 2.83
1853 1911 1.767088 AGCCGAAACCTAGGGTATTCC 59.233 52.381 14.81 3.56 36.34 3.01
1854 1912 3.555527 AAGCCGAAACCTAGGGTATTC 57.444 47.619 14.81 13.07 37.24 1.75
1855 1913 4.311520 AAAAGCCGAAACCTAGGGTATT 57.688 40.909 14.81 5.02 37.24 1.89
1856 1914 4.267536 GAAAAAGCCGAAACCTAGGGTAT 58.732 43.478 14.81 0.00 37.24 2.73
1857 1915 3.559811 GGAAAAAGCCGAAACCTAGGGTA 60.560 47.826 14.81 0.00 37.24 3.69
1858 1916 2.511659 GAAAAAGCCGAAACCTAGGGT 58.488 47.619 14.81 2.44 40.36 4.34
1859 1917 1.816835 GGAAAAAGCCGAAACCTAGGG 59.183 52.381 14.81 0.00 0.00 3.53
1860 1918 2.488153 CTGGAAAAAGCCGAAACCTAGG 59.512 50.000 7.41 7.41 0.00 3.02
1861 1919 2.488153 CCTGGAAAAAGCCGAAACCTAG 59.512 50.000 0.00 0.00 0.00 3.02
1862 1920 2.510613 CCTGGAAAAAGCCGAAACCTA 58.489 47.619 0.00 0.00 0.00 3.08
1863 1921 1.328279 CCTGGAAAAAGCCGAAACCT 58.672 50.000 0.00 0.00 0.00 3.50
1864 1922 0.319555 GCCTGGAAAAAGCCGAAACC 60.320 55.000 0.00 0.00 0.00 3.27
1865 1923 0.319555 GGCCTGGAAAAAGCCGAAAC 60.320 55.000 0.00 0.00 36.84 2.78
1866 1924 2.046108 GGCCTGGAAAAAGCCGAAA 58.954 52.632 0.00 0.00 36.84 3.46
1867 1925 3.771978 GGCCTGGAAAAAGCCGAA 58.228 55.556 0.00 0.00 36.84 4.30
1870 1928 2.947532 GCTGGGCCTGGAAAAAGCC 61.948 63.158 12.70 0.00 46.37 4.35
1871 1929 2.659016 GCTGGGCCTGGAAAAAGC 59.341 61.111 12.70 3.12 0.00 3.51
1872 1930 3.380995 GGCTGGGCCTGGAAAAAG 58.619 61.111 12.70 0.00 46.69 2.27
1889 1947 1.750778 CGATTTGGAAATCCCTGGTGG 59.249 52.381 6.54 0.00 41.30 4.61
1890 1948 2.446435 ACGATTTGGAAATCCCTGGTG 58.554 47.619 6.54 0.00 41.30 4.17
1891 1949 2.899303 ACGATTTGGAAATCCCTGGT 57.101 45.000 6.54 0.00 41.30 4.00
1892 1950 3.066760 GCTAACGATTTGGAAATCCCTGG 59.933 47.826 6.54 0.00 41.30 4.45
1893 1951 3.242739 CGCTAACGATTTGGAAATCCCTG 60.243 47.826 6.54 0.00 43.93 4.45
1894 1952 2.943033 CGCTAACGATTTGGAAATCCCT 59.057 45.455 6.54 0.00 43.93 4.20
1895 1953 2.032924 CCGCTAACGATTTGGAAATCCC 59.967 50.000 6.54 0.00 43.93 3.85
1896 1954 2.540973 GCCGCTAACGATTTGGAAATCC 60.541 50.000 6.54 0.00 43.93 3.01
1897 1955 2.716398 GCCGCTAACGATTTGGAAATC 58.284 47.619 2.50 2.50 43.93 2.17
1898 1956 1.063469 CGCCGCTAACGATTTGGAAAT 59.937 47.619 0.00 0.00 43.93 2.17
1899 1957 0.444651 CGCCGCTAACGATTTGGAAA 59.555 50.000 0.00 0.00 43.93 3.13
1900 1958 1.363145 CCGCCGCTAACGATTTGGAA 61.363 55.000 0.00 0.00 43.93 3.53
1901 1959 1.812093 CCGCCGCTAACGATTTGGA 60.812 57.895 0.00 0.00 43.93 3.53
1902 1960 2.707039 CCGCCGCTAACGATTTGG 59.293 61.111 0.00 0.00 43.93 3.28
1903 1961 1.641123 AACCCGCCGCTAACGATTTG 61.641 55.000 0.00 0.00 43.93 2.32
1904 1962 1.376295 AACCCGCCGCTAACGATTT 60.376 52.632 0.00 0.00 43.93 2.17
1905 1963 2.104253 CAACCCGCCGCTAACGATT 61.104 57.895 0.00 0.00 43.93 3.34
1906 1964 1.947597 TACAACCCGCCGCTAACGAT 61.948 55.000 0.00 0.00 43.93 3.73
1907 1965 2.152297 TTACAACCCGCCGCTAACGA 62.152 55.000 0.00 0.00 43.93 3.85
1908 1966 1.085501 ATTACAACCCGCCGCTAACG 61.086 55.000 0.00 0.00 39.67 3.18
1909 1967 1.594397 GTATTACAACCCGCCGCTAAC 59.406 52.381 0.00 0.00 0.00 2.34
1910 1968 1.481772 AGTATTACAACCCGCCGCTAA 59.518 47.619 0.00 0.00 0.00 3.09
1911 1969 1.113788 AGTATTACAACCCGCCGCTA 58.886 50.000 0.00 0.00 0.00 4.26
1912 1970 0.251073 AAGTATTACAACCCGCCGCT 59.749 50.000 0.00 0.00 0.00 5.52
1913 1971 0.375803 CAAGTATTACAACCCGCCGC 59.624 55.000 0.00 0.00 0.00 6.53
1914 1972 2.012937 TCAAGTATTACAACCCGCCG 57.987 50.000 0.00 0.00 0.00 6.46
1915 1973 2.032924 GCATCAAGTATTACAACCCGCC 59.967 50.000 0.00 0.00 0.00 6.13
1916 1974 2.680841 TGCATCAAGTATTACAACCCGC 59.319 45.455 0.00 0.00 0.00 6.13
1917 1975 3.312421 CCTGCATCAAGTATTACAACCCG 59.688 47.826 0.00 0.00 0.00 5.28
1918 1976 4.523083 TCCTGCATCAAGTATTACAACCC 58.477 43.478 0.00 0.00 0.00 4.11
1919 1977 5.009010 CCATCCTGCATCAAGTATTACAACC 59.991 44.000 0.00 0.00 0.00 3.77
1920 1978 5.590259 ACCATCCTGCATCAAGTATTACAAC 59.410 40.000 0.00 0.00 0.00 3.32
1952 2010 0.773644 AACCCACTGAGCAACTCCAT 59.226 50.000 0.00 0.00 0.00 3.41
2084 2142 2.137523 CCAATTGCTTGTTCACCTTGC 58.862 47.619 0.00 0.00 0.00 4.01
2108 2166 2.303022 TGACTGAACTGATCCCCAAGTC 59.697 50.000 0.00 0.00 0.00 3.01
2170 2228 3.136443 TCACTCATGACCCTGTTGTTCTT 59.864 43.478 0.00 0.00 0.00 2.52
2771 2833 2.351244 GCCCAAGCCACCCTAAAGC 61.351 63.158 0.00 0.00 0.00 3.51
2792 2854 7.604657 AATGATAGTTTTGGGTGGTTTTGTA 57.395 32.000 0.00 0.00 0.00 2.41
2804 2921 9.132521 CACTCAAAAGCCTAAATGATAGTTTTG 57.867 33.333 0.00 0.00 35.63 2.44
2805 2922 8.306761 CCACTCAAAAGCCTAAATGATAGTTTT 58.693 33.333 0.00 0.00 0.00 2.43
2810 3514 5.509498 AGCCACTCAAAAGCCTAAATGATA 58.491 37.500 0.00 0.00 0.00 2.15
2812 3516 3.766545 AGCCACTCAAAAGCCTAAATGA 58.233 40.909 0.00 0.00 0.00 2.57
2820 3524 1.005748 GCCCAAGCCACTCAAAAGC 60.006 57.895 0.00 0.00 0.00 3.51
2824 3528 2.032528 CGAGCCCAAGCCACTCAA 59.967 61.111 0.00 0.00 41.25 3.02
2826 3530 2.435059 GTCGAGCCCAAGCCACTC 60.435 66.667 0.00 0.00 41.25 3.51
2827 3531 2.337879 TTTGTCGAGCCCAAGCCACT 62.338 55.000 0.00 0.00 41.25 4.00
2934 3856 1.804748 GTTTAGGTGGCTTTGTCGAGG 59.195 52.381 0.00 0.00 0.00 4.63
2954 3876 5.703130 GCCACTCTAAAGCCTAAATGATAGG 59.297 44.000 0.00 0.00 37.75 2.57
2999 3980 7.216494 CACCTTGAAGATTAAATGGTGGTTTT 58.784 34.615 0.00 0.00 39.58 2.43
3031 4012 1.804748 GTTTAGGTGGCTTTGTCGAGG 59.195 52.381 0.00 0.00 0.00 4.63
3051 4180 5.703130 GCCACTCTAAAGCCTAAATGATAGG 59.297 44.000 0.00 0.00 37.75 2.57
3069 4198 0.033504 TTGTCGAGTCCAAGCCACTC 59.966 55.000 0.00 0.00 37.51 3.51
3070 4199 0.468226 TTTGTCGAGTCCAAGCCACT 59.532 50.000 0.00 0.00 0.00 4.00
3071 4200 1.002792 GTTTTGTCGAGTCCAAGCCAC 60.003 52.381 0.00 0.00 0.00 5.01
3072 4201 1.305201 GTTTTGTCGAGTCCAAGCCA 58.695 50.000 0.00 0.00 0.00 4.75
3073 4202 0.591659 GGTTTTGTCGAGTCCAAGCC 59.408 55.000 0.00 0.00 0.00 4.35
3376 4505 6.530019 AAATGATAGGTTTAGGTGGCTTTG 57.470 37.500 0.00 0.00 0.00 2.77
3377 4506 6.321435 GCTAAATGATAGGTTTAGGTGGCTTT 59.679 38.462 7.49 0.00 38.80 3.51
3378 4507 5.828328 GCTAAATGATAGGTTTAGGTGGCTT 59.172 40.000 7.49 0.00 38.80 4.35
3379 4508 5.377478 GCTAAATGATAGGTTTAGGTGGCT 58.623 41.667 7.49 0.00 38.80 4.75
3380 4509 4.519350 GGCTAAATGATAGGTTTAGGTGGC 59.481 45.833 7.49 0.00 38.80 5.01
3381 4510 5.941788 AGGCTAAATGATAGGTTTAGGTGG 58.058 41.667 7.49 0.00 38.80 4.61
3382 4511 7.881775 AAAGGCTAAATGATAGGTTTAGGTG 57.118 36.000 7.49 0.00 38.80 4.00
3383 4512 8.999895 TCTAAAGGCTAAATGATAGGTTTAGGT 58.000 33.333 7.49 0.00 38.80 3.08
3384 4513 9.495572 CTCTAAAGGCTAAATGATAGGTTTAGG 57.504 37.037 7.49 0.00 38.80 2.69
3386 4515 9.832445 CACTCTAAAGGCTAAATGATAGGTTTA 57.168 33.333 0.00 0.00 0.00 2.01
3387 4516 7.775561 CCACTCTAAAGGCTAAATGATAGGTTT 59.224 37.037 0.00 0.00 0.00 3.27
3388 4517 7.283329 CCACTCTAAAGGCTAAATGATAGGTT 58.717 38.462 0.00 0.00 0.00 3.50
3389 4518 6.831976 CCACTCTAAAGGCTAAATGATAGGT 58.168 40.000 0.00 0.00 0.00 3.08
3402 4531 0.329596 AGCCCAAGCCACTCTAAAGG 59.670 55.000 0.00 0.00 41.25 3.11
3403 4532 1.743996 GAGCCCAAGCCACTCTAAAG 58.256 55.000 0.00 0.00 41.25 1.85
3404 4533 0.036388 CGAGCCCAAGCCACTCTAAA 60.036 55.000 0.00 0.00 41.25 1.85
3405 4534 0.902984 TCGAGCCCAAGCCACTCTAA 60.903 55.000 0.00 0.00 41.25 2.10
3406 4535 1.304962 TCGAGCCCAAGCCACTCTA 60.305 57.895 0.00 0.00 41.25 2.43
3407 4536 2.604686 TCGAGCCCAAGCCACTCT 60.605 61.111 0.00 0.00 41.25 3.24
3435 4564 6.646240 CACCTTGAAGATTTAATGGTGGTTTG 59.354 38.462 0.00 0.00 39.58 2.93
3447 4674 2.560105 GCTGAAGCCACCTTGAAGATTT 59.440 45.455 0.00 0.00 34.31 2.17
3465 4692 0.037326 TAGGTGGCTTTGTCGAGCTG 60.037 55.000 0.00 0.00 42.32 4.24
3466 4693 0.685097 TTAGGTGGCTTTGTCGAGCT 59.315 50.000 0.00 0.00 42.32 4.09
3487 4715 4.946157 CCACTCAAAAGCCTGAATGATAGT 59.054 41.667 0.00 0.00 0.00 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.