Multiple sequence alignment - TraesCS7D01G066400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G066400 chr7D 100.000 3077 0 0 1 3077 37236092 37233016 0.000000e+00 5683.0
1 TraesCS7D01G066400 chr7D 91.011 178 14 2 165 342 159027238 159027063 3.970000e-59 239.0
2 TraesCS7D01G066400 chr7D 83.600 250 25 12 2365 2608 25031892 25031653 1.440000e-53 220.0
3 TraesCS7D01G066400 chr7D 90.769 65 6 0 1203 1267 535967294 535967358 1.520000e-13 87.9
4 TraesCS7D01G066400 chr7D 90.741 54 5 0 88 141 391965317 391965370 4.260000e-09 73.1
5 TraesCS7D01G066400 chrUn 94.316 1337 59 4 981 2312 90939491 90938167 0.000000e+00 2032.0
6 TraesCS7D01G066400 chrUn 94.091 1337 62 4 981 2312 90726946 90725622 0.000000e+00 2015.0
7 TraesCS7D01G066400 chrUn 90.423 804 41 8 2309 3077 90725561 90724759 0.000000e+00 1026.0
8 TraesCS7D01G066400 chrUn 93.132 597 27 3 981 1575 401026816 401026232 0.000000e+00 863.0
9 TraesCS7D01G066400 chrUn 94.915 531 16 6 2558 3077 90937295 90936765 0.000000e+00 821.0
10 TraesCS7D01G066400 chrUn 83.824 272 17 10 2309 2554 90938106 90937836 1.840000e-57 233.0
11 TraesCS7D01G066400 chrUn 93.939 66 4 0 2947 3012 90724824 90724759 1.950000e-17 100.0
12 TraesCS7D01G066400 chrUn 84.259 108 9 3 871 973 90727092 90726988 7.020000e-17 99.0
13 TraesCS7D01G066400 chrUn 84.259 108 9 3 871 973 90939637 90939533 7.020000e-17 99.0
14 TraesCS7D01G066400 chrUn 84.259 108 9 3 871 973 401026962 401026858 7.020000e-17 99.0
15 TraesCS7D01G066400 chr4A 91.278 1479 77 25 871 2312 689137940 689136477 0.000000e+00 1969.0
16 TraesCS7D01G066400 chr4A 91.295 448 26 6 2461 2895 689134502 689134055 1.580000e-167 599.0
17 TraesCS7D01G066400 chr4A 91.866 418 30 3 1691 2108 689187843 689187430 5.720000e-162 580.0
18 TraesCS7D01G066400 chr4A 96.259 294 11 0 2784 3077 689134021 689133728 1.660000e-132 483.0
19 TraesCS7D01G066400 chr4A 83.068 502 47 10 871 1356 689190745 689190266 3.670000e-114 422.0
20 TraesCS7D01G066400 chr4A 88.545 323 30 2 867 1182 689184471 689184149 4.810000e-103 385.0
21 TraesCS7D01G066400 chr4A 82.178 303 40 3 535 827 689138237 689137939 6.590000e-62 248.0
22 TraesCS7D01G066400 chr4A 89.172 157 10 6 1543 1695 689190025 689189872 4.050000e-44 189.0
23 TraesCS7D01G066400 chr4A 80.498 241 33 10 2365 2600 22727943 22728174 4.080000e-39 172.0
24 TraesCS7D01G066400 chr4A 95.455 66 3 0 2947 3012 689133793 689133728 4.200000e-19 106.0
25 TraesCS7D01G066400 chr4A 95.385 65 3 0 3013 3077 689133857 689133793 1.510000e-18 104.0
26 TraesCS7D01G066400 chr4A 91.304 46 3 1 2788 2832 700504822 700504777 9.210000e-06 62.1
27 TraesCS7D01G066400 chr7A 92.302 1312 85 7 866 2163 36630352 36629043 0.000000e+00 1849.0
28 TraesCS7D01G066400 chr7A 77.593 241 31 14 2365 2588 652343186 652343420 1.160000e-24 124.0
29 TraesCS7D01G066400 chr3B 85.006 907 114 16 1236 2129 807440575 807439678 0.000000e+00 902.0
30 TraesCS7D01G066400 chr3B 85.936 839 110 5 1236 2073 807483011 807482180 0.000000e+00 889.0
31 TraesCS7D01G066400 chr3B 86.290 248 23 9 2365 2608 675639735 675639975 3.040000e-65 259.0
32 TraesCS7D01G066400 chr3B 89.560 182 16 3 165 345 494399532 494399353 8.580000e-56 228.0
33 TraesCS7D01G066400 chr3D 86.027 823 107 6 1234 2055 600529367 600528552 0.000000e+00 876.0
34 TraesCS7D01G066400 chr3D 73.122 945 207 39 1100 2019 600820728 600819806 8.340000e-76 294.0
35 TraesCS7D01G066400 chr3D 89.730 185 15 4 165 347 428897352 428897534 1.840000e-57 233.0
36 TraesCS7D01G066400 chr3D 89.937 159 16 0 1083 1241 600424497 600424339 4.020000e-49 206.0
37 TraesCS7D01G066400 chr3D 81.154 260 18 13 2365 2600 578673081 578673333 2.440000e-41 180.0
38 TraesCS7D01G066400 chr3D 83.226 155 19 3 381 530 179946211 179946059 5.350000e-28 135.0
39 TraesCS7D01G066400 chr3D 88.060 67 8 0 93 159 117880351 117880285 2.540000e-11 80.5
40 TraesCS7D01G066400 chr3D 88.060 67 8 0 93 159 178072176 178072242 2.540000e-11 80.5
41 TraesCS7D01G066400 chr3A 85.941 818 107 5 1236 2052 730397967 730398777 0.000000e+00 867.0
42 TraesCS7D01G066400 chr3A 83.298 467 55 13 1670 2129 729956048 729955598 2.860000e-110 409.0
43 TraesCS7D01G066400 chr3A 89.674 184 15 4 165 346 24755526 24755345 6.640000e-57 231.0
44 TraesCS7D01G066400 chr3A 85.714 70 10 0 90 159 485525653 485525722 1.180000e-09 75.0
45 TraesCS7D01G066400 chr2B 87.903 248 21 6 2365 2609 416000420 416000661 1.810000e-72 283.0
46 TraesCS7D01G066400 chr2B 89.944 179 14 3 165 342 270186368 270186543 8.580000e-56 228.0
47 TraesCS7D01G066400 chr1A 84.191 272 15 11 2365 2608 175175909 175176180 3.970000e-59 239.0
48 TraesCS7D01G066400 chr1A 90.503 179 13 4 165 342 527245812 527245987 1.840000e-57 233.0
49 TraesCS7D01G066400 chr1A 84.516 155 18 3 381 530 405090494 405090341 6.870000e-32 148.0
50 TraesCS7D01G066400 chr1A 82.166 157 24 2 377 529 237735679 237735835 6.920000e-27 132.0
51 TraesCS7D01G066400 chr4D 90.449 178 13 4 165 342 7904759 7904586 6.640000e-57 231.0
52 TraesCS7D01G066400 chr5A 89.944 179 14 3 165 342 681937592 681937767 8.580000e-56 228.0
53 TraesCS7D01G066400 chr5A 82.784 273 19 12 2365 2609 1386748 1386476 5.170000e-53 219.0
54 TraesCS7D01G066400 chr5A 90.323 62 6 0 93 154 307705457 307705518 7.070000e-12 82.4
55 TraesCS7D01G066400 chr2D 88.360 189 19 3 165 352 202604535 202604721 1.110000e-54 224.0
56 TraesCS7D01G066400 chr6D 89.655 174 13 3 2439 2608 156559640 156559812 1.860000e-52 217.0
57 TraesCS7D01G066400 chr6D 94.737 57 1 2 477 532 386404356 386404301 1.520000e-13 87.9
58 TraesCS7D01G066400 chr5D 86.957 184 19 4 2432 2611 42233306 42233124 5.200000e-48 202.0
59 TraesCS7D01G066400 chr5D 88.304 171 17 2 2440 2608 556926250 556926419 5.200000e-48 202.0
60 TraesCS7D01G066400 chr5B 87.013 154 14 3 381 529 504187337 504187185 5.280000e-38 169.0
61 TraesCS7D01G066400 chr5B 76.349 241 37 13 2365 2600 685220849 685220624 9.020000e-21 111.0
62 TraesCS7D01G066400 chr4B 79.752 242 36 11 2365 2600 554814449 554814683 2.460000e-36 163.0
63 TraesCS7D01G066400 chr4B 85.246 122 17 1 2712 2832 471919809 471919688 1.160000e-24 124.0
64 TraesCS7D01G066400 chr7B 82.645 121 14 4 2365 2482 633894489 633894373 1.950000e-17 100.0
65 TraesCS7D01G066400 chr2A 91.045 67 6 0 93 159 779288912 779288846 1.170000e-14 91.6
66 TraesCS7D01G066400 chr2A 89.552 67 7 0 93 159 639969105 639969171 5.470000e-13 86.1
67 TraesCS7D01G066400 chr6B 87.143 70 9 0 90 159 43743740 43743809 2.540000e-11 80.5
68 TraesCS7D01G066400 chr6A 95.745 47 2 0 93 139 22430437 22430483 3.290000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G066400 chr7D 37233016 37236092 3076 True 5683.000000 5683 100.00000 1 3077 1 chr7D.!!$R2 3076
1 TraesCS7D01G066400 chrUn 90724759 90727092 2333 True 810.000000 2015 90.67800 871 3077 4 chrUn.!!$R1 2206
2 TraesCS7D01G066400 chrUn 90936765 90939637 2872 True 796.250000 2032 89.32850 871 3077 4 chrUn.!!$R2 2206
3 TraesCS7D01G066400 chrUn 401026232 401026962 730 True 481.000000 863 88.69550 871 1575 2 chrUn.!!$R3 704
4 TraesCS7D01G066400 chr4A 689133728 689138237 4509 True 584.833333 1969 91.97500 535 3077 6 chr4A.!!$R2 2542
5 TraesCS7D01G066400 chr4A 689184149 689190745 6596 True 394.000000 580 88.16275 867 2108 4 chr4A.!!$R3 1241
6 TraesCS7D01G066400 chr7A 36629043 36630352 1309 True 1849.000000 1849 92.30200 866 2163 1 chr7A.!!$R1 1297
7 TraesCS7D01G066400 chr3B 807439678 807440575 897 True 902.000000 902 85.00600 1236 2129 1 chr3B.!!$R2 893
8 TraesCS7D01G066400 chr3B 807482180 807483011 831 True 889.000000 889 85.93600 1236 2073 1 chr3B.!!$R3 837
9 TraesCS7D01G066400 chr3D 600528552 600529367 815 True 876.000000 876 86.02700 1234 2055 1 chr3D.!!$R4 821
10 TraesCS7D01G066400 chr3D 600819806 600820728 922 True 294.000000 294 73.12200 1100 2019 1 chr3D.!!$R5 919
11 TraesCS7D01G066400 chr3A 730397967 730398777 810 False 867.000000 867 85.94100 1236 2052 1 chr3A.!!$F2 816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
159 160 0.035317 AAAGCGCTGGAGTGACATGA 59.965 50.0 12.58 0.0 0.00 3.07 F
163 164 0.037882 CGCTGGAGTGACATGAGTGT 60.038 55.0 0.00 0.0 42.49 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2032 4269 0.032815 TCGACGATGGTCTGCACAAA 59.967 50.0 6.29 0.0 41.16 2.83 R
2163 4405 1.057275 TTGGTACCCTGGAGCACACA 61.057 55.0 10.07 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.658994 GTGTGTGTTTTCCTCGGTGA 58.341 50.000 0.00 0.00 0.00 4.02
20 21 2.218603 GTGTGTGTTTTCCTCGGTGAT 58.781 47.619 0.00 0.00 0.00 3.06
21 22 2.223377 GTGTGTGTTTTCCTCGGTGATC 59.777 50.000 0.00 0.00 0.00 2.92
22 23 1.804748 GTGTGTTTTCCTCGGTGATCC 59.195 52.381 0.00 0.00 0.00 3.36
23 24 1.271163 TGTGTTTTCCTCGGTGATCCC 60.271 52.381 0.00 0.00 0.00 3.85
24 25 0.326927 TGTTTTCCTCGGTGATCCCC 59.673 55.000 0.00 0.00 0.00 4.81
25 26 0.618981 GTTTTCCTCGGTGATCCCCT 59.381 55.000 0.00 0.00 0.00 4.79
26 27 0.618458 TTTTCCTCGGTGATCCCCTG 59.382 55.000 0.00 0.00 0.00 4.45
27 28 0.546747 TTTCCTCGGTGATCCCCTGT 60.547 55.000 0.00 0.00 0.00 4.00
28 29 1.264749 TTCCTCGGTGATCCCCTGTG 61.265 60.000 0.00 0.00 0.00 3.66
29 30 1.685765 CCTCGGTGATCCCCTGTGA 60.686 63.158 0.00 0.00 0.00 3.58
30 31 1.050988 CCTCGGTGATCCCCTGTGAT 61.051 60.000 0.00 0.00 0.00 3.06
31 32 0.833287 CTCGGTGATCCCCTGTGATT 59.167 55.000 0.00 0.00 0.00 2.57
32 33 1.210478 CTCGGTGATCCCCTGTGATTT 59.790 52.381 0.00 0.00 0.00 2.17
33 34 1.633432 TCGGTGATCCCCTGTGATTTT 59.367 47.619 0.00 0.00 0.00 1.82
34 35 2.041081 TCGGTGATCCCCTGTGATTTTT 59.959 45.455 0.00 0.00 0.00 1.94
35 36 2.423538 CGGTGATCCCCTGTGATTTTTC 59.576 50.000 0.00 0.00 0.00 2.29
36 37 3.701664 GGTGATCCCCTGTGATTTTTCT 58.298 45.455 0.00 0.00 0.00 2.52
37 38 4.089361 GGTGATCCCCTGTGATTTTTCTT 58.911 43.478 0.00 0.00 0.00 2.52
38 39 4.158579 GGTGATCCCCTGTGATTTTTCTTC 59.841 45.833 0.00 0.00 0.00 2.87
39 40 4.766891 GTGATCCCCTGTGATTTTTCTTCA 59.233 41.667 0.00 0.00 0.00 3.02
40 41 5.243730 GTGATCCCCTGTGATTTTTCTTCAA 59.756 40.000 0.00 0.00 0.00 2.69
41 42 6.018469 TGATCCCCTGTGATTTTTCTTCAAT 58.982 36.000 0.00 0.00 0.00 2.57
42 43 5.726980 TCCCCTGTGATTTTTCTTCAATG 57.273 39.130 0.00 0.00 0.00 2.82
43 44 5.147032 TCCCCTGTGATTTTTCTTCAATGT 58.853 37.500 0.00 0.00 0.00 2.71
44 45 5.243730 TCCCCTGTGATTTTTCTTCAATGTC 59.756 40.000 0.00 0.00 0.00 3.06
45 46 5.244626 CCCCTGTGATTTTTCTTCAATGTCT 59.755 40.000 0.00 0.00 0.00 3.41
46 47 6.434028 CCCCTGTGATTTTTCTTCAATGTCTA 59.566 38.462 0.00 0.00 0.00 2.59
47 48 7.039784 CCCCTGTGATTTTTCTTCAATGTCTAA 60.040 37.037 0.00 0.00 0.00 2.10
48 49 8.359642 CCCTGTGATTTTTCTTCAATGTCTAAA 58.640 33.333 0.00 0.00 0.00 1.85
49 50 9.918630 CCTGTGATTTTTCTTCAATGTCTAAAT 57.081 29.630 0.00 0.00 0.00 1.40
55 56 9.710900 ATTTTTCTTCAATGTCTAAATCAACCC 57.289 29.630 0.00 0.00 0.00 4.11
56 57 8.477419 TTTTCTTCAATGTCTAAATCAACCCT 57.523 30.769 0.00 0.00 0.00 4.34
57 58 7.687941 TTCTTCAATGTCTAAATCAACCCTC 57.312 36.000 0.00 0.00 0.00 4.30
58 59 7.020827 TCTTCAATGTCTAAATCAACCCTCT 57.979 36.000 0.00 0.00 0.00 3.69
59 60 7.106239 TCTTCAATGTCTAAATCAACCCTCTC 58.894 38.462 0.00 0.00 0.00 3.20
60 61 6.627087 TCAATGTCTAAATCAACCCTCTCT 57.373 37.500 0.00 0.00 0.00 3.10
61 62 7.020827 TCAATGTCTAAATCAACCCTCTCTT 57.979 36.000 0.00 0.00 0.00 2.85
62 63 6.881065 TCAATGTCTAAATCAACCCTCTCTTG 59.119 38.462 0.00 0.00 0.00 3.02
63 64 6.627087 ATGTCTAAATCAACCCTCTCTTGA 57.373 37.500 0.00 0.00 32.24 3.02
64 65 6.433847 TGTCTAAATCAACCCTCTCTTGAA 57.566 37.500 0.00 0.00 31.48 2.69
65 66 7.020827 TGTCTAAATCAACCCTCTCTTGAAT 57.979 36.000 0.00 0.00 31.48 2.57
66 67 7.106239 TGTCTAAATCAACCCTCTCTTGAATC 58.894 38.462 0.00 0.00 31.48 2.52
67 68 7.038017 TGTCTAAATCAACCCTCTCTTGAATCT 60.038 37.037 0.00 0.00 31.48 2.40
68 69 8.478877 GTCTAAATCAACCCTCTCTTGAATCTA 58.521 37.037 0.00 0.00 31.48 1.98
69 70 9.046846 TCTAAATCAACCCTCTCTTGAATCTAA 57.953 33.333 0.00 0.00 31.48 2.10
70 71 9.672673 CTAAATCAACCCTCTCTTGAATCTAAA 57.327 33.333 0.00 0.00 31.48 1.85
71 72 7.929941 AATCAACCCTCTCTTGAATCTAAAC 57.070 36.000 0.00 0.00 31.48 2.01
72 73 6.433847 TCAACCCTCTCTTGAATCTAAACA 57.566 37.500 0.00 0.00 0.00 2.83
73 74 7.020827 TCAACCCTCTCTTGAATCTAAACAT 57.979 36.000 0.00 0.00 0.00 2.71
74 75 8.146053 TCAACCCTCTCTTGAATCTAAACATA 57.854 34.615 0.00 0.00 0.00 2.29
75 76 8.041323 TCAACCCTCTCTTGAATCTAAACATAC 58.959 37.037 0.00 0.00 0.00 2.39
76 77 7.496346 ACCCTCTCTTGAATCTAAACATACA 57.504 36.000 0.00 0.00 0.00 2.29
77 78 7.331791 ACCCTCTCTTGAATCTAAACATACAC 58.668 38.462 0.00 0.00 0.00 2.90
78 79 6.763610 CCCTCTCTTGAATCTAAACATACACC 59.236 42.308 0.00 0.00 0.00 4.16
79 80 6.763610 CCTCTCTTGAATCTAAACATACACCC 59.236 42.308 0.00 0.00 0.00 4.61
80 81 7.365117 CCTCTCTTGAATCTAAACATACACCCT 60.365 40.741 0.00 0.00 0.00 4.34
81 82 7.331026 TCTCTTGAATCTAAACATACACCCTG 58.669 38.462 0.00 0.00 0.00 4.45
82 83 7.016153 TCTTGAATCTAAACATACACCCTGT 57.984 36.000 0.00 0.00 0.00 4.00
83 84 6.878923 TCTTGAATCTAAACATACACCCTGTG 59.121 38.462 0.00 0.00 39.75 3.66
84 85 6.367374 TGAATCTAAACATACACCCTGTGA 57.633 37.500 0.49 0.00 36.96 3.58
85 86 6.957631 TGAATCTAAACATACACCCTGTGAT 58.042 36.000 0.49 0.00 36.96 3.06
86 87 7.402054 TGAATCTAAACATACACCCTGTGATT 58.598 34.615 0.49 0.00 36.96 2.57
87 88 7.888021 TGAATCTAAACATACACCCTGTGATTT 59.112 33.333 0.49 0.00 36.96 2.17
88 89 8.650143 AATCTAAACATACACCCTGTGATTTT 57.350 30.769 0.49 0.00 36.96 1.82
89 90 8.650143 ATCTAAACATACACCCTGTGATTTTT 57.350 30.769 0.49 0.37 36.96 1.94
110 111 5.920193 TTTTGGGCCTCTTTGATTCATAG 57.080 39.130 4.53 0.00 0.00 2.23
111 112 3.582998 TGGGCCTCTTTGATTCATAGG 57.417 47.619 4.53 5.38 0.00 2.57
112 113 3.122480 TGGGCCTCTTTGATTCATAGGA 58.878 45.455 4.53 0.85 0.00 2.94
113 114 3.723681 TGGGCCTCTTTGATTCATAGGAT 59.276 43.478 4.53 0.00 0.00 3.24
114 115 4.168675 TGGGCCTCTTTGATTCATAGGATT 59.831 41.667 4.53 0.00 0.00 3.01
115 116 5.143369 GGGCCTCTTTGATTCATAGGATTT 58.857 41.667 0.84 0.00 0.00 2.17
116 117 5.600069 GGGCCTCTTTGATTCATAGGATTTT 59.400 40.000 0.84 0.00 0.00 1.82
117 118 6.462067 GGGCCTCTTTGATTCATAGGATTTTG 60.462 42.308 0.84 0.00 0.00 2.44
118 119 6.322201 GGCCTCTTTGATTCATAGGATTTTGA 59.678 38.462 12.17 0.00 0.00 2.69
119 120 7.147846 GGCCTCTTTGATTCATAGGATTTTGAA 60.148 37.037 12.17 0.00 36.38 2.69
120 121 7.704047 GCCTCTTTGATTCATAGGATTTTGAAC 59.296 37.037 12.17 0.00 34.87 3.18
121 122 8.742777 CCTCTTTGATTCATAGGATTTTGAACA 58.257 33.333 4.57 0.00 34.87 3.18
122 123 9.565213 CTCTTTGATTCATAGGATTTTGAACAC 57.435 33.333 4.57 0.00 34.87 3.32
123 124 8.236586 TCTTTGATTCATAGGATTTTGAACACG 58.763 33.333 4.57 0.00 34.87 4.49
124 125 7.447374 TTGATTCATAGGATTTTGAACACGT 57.553 32.000 0.00 0.00 34.87 4.49
125 126 6.841119 TGATTCATAGGATTTTGAACACGTG 58.159 36.000 15.48 15.48 34.87 4.49
126 127 5.621197 TTCATAGGATTTTGAACACGTGG 57.379 39.130 21.57 1.66 0.00 4.94
127 128 4.006989 TCATAGGATTTTGAACACGTGGG 58.993 43.478 21.57 0.00 0.00 4.61
128 129 2.649531 AGGATTTTGAACACGTGGGA 57.350 45.000 21.57 0.00 0.00 4.37
129 130 2.938838 AGGATTTTGAACACGTGGGAA 58.061 42.857 21.57 6.28 0.00 3.97
130 131 3.496331 AGGATTTTGAACACGTGGGAAT 58.504 40.909 21.57 11.48 0.00 3.01
131 132 4.658063 AGGATTTTGAACACGTGGGAATA 58.342 39.130 21.57 4.93 0.00 1.75
132 133 4.700213 AGGATTTTGAACACGTGGGAATAG 59.300 41.667 21.57 0.00 0.00 1.73
133 134 4.142469 GGATTTTGAACACGTGGGAATAGG 60.142 45.833 21.57 0.00 0.00 2.57
134 135 3.773418 TTTGAACACGTGGGAATAGGA 57.227 42.857 21.57 0.00 0.00 2.94
135 136 3.773418 TTGAACACGTGGGAATAGGAA 57.227 42.857 21.57 0.00 0.00 3.36
136 137 3.773418 TGAACACGTGGGAATAGGAAA 57.227 42.857 21.57 0.00 0.00 3.13
137 138 4.088056 TGAACACGTGGGAATAGGAAAA 57.912 40.909 21.57 0.00 0.00 2.29
138 139 4.069304 TGAACACGTGGGAATAGGAAAAG 58.931 43.478 21.57 0.00 0.00 2.27
139 140 3.782656 ACACGTGGGAATAGGAAAAGT 57.217 42.857 21.57 0.00 0.00 2.66
140 141 4.895668 ACACGTGGGAATAGGAAAAGTA 57.104 40.909 21.57 0.00 0.00 2.24
141 142 5.231702 ACACGTGGGAATAGGAAAAGTAA 57.768 39.130 21.57 0.00 0.00 2.24
142 143 5.623169 ACACGTGGGAATAGGAAAAGTAAA 58.377 37.500 21.57 0.00 0.00 2.01
143 144 5.704053 ACACGTGGGAATAGGAAAAGTAAAG 59.296 40.000 21.57 0.00 0.00 1.85
144 145 4.698780 ACGTGGGAATAGGAAAAGTAAAGC 59.301 41.667 0.00 0.00 0.00 3.51
145 146 4.201783 CGTGGGAATAGGAAAAGTAAAGCG 60.202 45.833 0.00 0.00 0.00 4.68
146 147 3.692593 TGGGAATAGGAAAAGTAAAGCGC 59.307 43.478 0.00 0.00 0.00 5.92
147 148 3.945921 GGGAATAGGAAAAGTAAAGCGCT 59.054 43.478 2.64 2.64 0.00 5.92
148 149 4.201920 GGGAATAGGAAAAGTAAAGCGCTG 60.202 45.833 12.58 0.00 0.00 5.18
149 150 4.201920 GGAATAGGAAAAGTAAAGCGCTGG 60.202 45.833 12.58 0.00 0.00 4.85
150 151 2.561478 AGGAAAAGTAAAGCGCTGGA 57.439 45.000 12.58 0.00 0.00 3.86
151 152 2.427506 AGGAAAAGTAAAGCGCTGGAG 58.572 47.619 12.58 0.00 0.00 3.86
152 153 2.152016 GGAAAAGTAAAGCGCTGGAGT 58.848 47.619 12.58 1.11 0.00 3.85
153 154 2.095718 GGAAAAGTAAAGCGCTGGAGTG 60.096 50.000 12.58 0.00 0.00 3.51
154 155 2.543777 AAAGTAAAGCGCTGGAGTGA 57.456 45.000 12.58 0.00 0.00 3.41
155 156 1.797025 AAGTAAAGCGCTGGAGTGAC 58.203 50.000 12.58 0.00 0.00 3.67
156 157 0.679505 AGTAAAGCGCTGGAGTGACA 59.320 50.000 12.58 0.00 0.00 3.58
157 158 1.276421 AGTAAAGCGCTGGAGTGACAT 59.724 47.619 12.58 0.00 0.00 3.06
158 159 1.394917 GTAAAGCGCTGGAGTGACATG 59.605 52.381 12.58 0.00 0.00 3.21
159 160 0.035317 AAAGCGCTGGAGTGACATGA 59.965 50.000 12.58 0.00 0.00 3.07
160 161 0.390866 AAGCGCTGGAGTGACATGAG 60.391 55.000 12.58 0.00 0.00 2.90
161 162 1.079543 GCGCTGGAGTGACATGAGT 60.080 57.895 0.00 0.00 0.00 3.41
162 163 1.357258 GCGCTGGAGTGACATGAGTG 61.357 60.000 0.00 0.00 0.00 3.51
163 164 0.037882 CGCTGGAGTGACATGAGTGT 60.038 55.000 0.00 0.00 42.49 3.55
164 165 1.606480 CGCTGGAGTGACATGAGTGTT 60.606 52.381 0.00 0.00 39.09 3.32
165 166 2.498167 GCTGGAGTGACATGAGTGTTT 58.502 47.619 0.00 0.00 39.09 2.83
166 167 2.225019 GCTGGAGTGACATGAGTGTTTG 59.775 50.000 0.00 0.00 39.09 2.93
167 168 3.470709 CTGGAGTGACATGAGTGTTTGT 58.529 45.455 0.00 0.00 39.09 2.83
168 169 4.631131 CTGGAGTGACATGAGTGTTTGTA 58.369 43.478 0.00 0.00 39.09 2.41
169 170 5.029807 TGGAGTGACATGAGTGTTTGTAA 57.970 39.130 0.00 0.00 39.09 2.41
170 171 5.432645 TGGAGTGACATGAGTGTTTGTAAA 58.567 37.500 0.00 0.00 39.09 2.01
171 172 5.883115 TGGAGTGACATGAGTGTTTGTAAAA 59.117 36.000 0.00 0.00 39.09 1.52
172 173 6.375736 TGGAGTGACATGAGTGTTTGTAAAAA 59.624 34.615 0.00 0.00 39.09 1.94
173 174 6.912591 GGAGTGACATGAGTGTTTGTAAAAAG 59.087 38.462 0.00 0.00 39.09 2.27
174 175 7.201696 GGAGTGACATGAGTGTTTGTAAAAAGA 60.202 37.037 0.00 0.00 39.09 2.52
175 176 8.050778 AGTGACATGAGTGTTTGTAAAAAGAA 57.949 30.769 0.00 0.00 39.09 2.52
176 177 8.184192 AGTGACATGAGTGTTTGTAAAAAGAAG 58.816 33.333 0.00 0.00 39.09 2.85
177 178 7.968405 GTGACATGAGTGTTTGTAAAAAGAAGT 59.032 33.333 0.00 0.00 39.09 3.01
178 179 8.519526 TGACATGAGTGTTTGTAAAAAGAAGTT 58.480 29.630 0.00 0.00 39.09 2.66
179 180 8.687824 ACATGAGTGTTTGTAAAAAGAAGTTG 57.312 30.769 0.00 0.00 34.01 3.16
180 181 7.759433 ACATGAGTGTTTGTAAAAAGAAGTTGG 59.241 33.333 0.00 0.00 34.01 3.77
181 182 7.455641 TGAGTGTTTGTAAAAAGAAGTTGGA 57.544 32.000 0.00 0.00 0.00 3.53
182 183 7.535139 TGAGTGTTTGTAAAAAGAAGTTGGAG 58.465 34.615 0.00 0.00 0.00 3.86
183 184 7.175990 TGAGTGTTTGTAAAAAGAAGTTGGAGT 59.824 33.333 0.00 0.00 0.00 3.85
184 185 7.312899 AGTGTTTGTAAAAAGAAGTTGGAGTG 58.687 34.615 0.00 0.00 0.00 3.51
185 186 6.530181 GTGTTTGTAAAAAGAAGTTGGAGTGG 59.470 38.462 0.00 0.00 0.00 4.00
186 187 6.434652 TGTTTGTAAAAAGAAGTTGGAGTGGA 59.565 34.615 0.00 0.00 0.00 4.02
187 188 7.123547 TGTTTGTAAAAAGAAGTTGGAGTGGAT 59.876 33.333 0.00 0.00 0.00 3.41
188 189 8.626526 GTTTGTAAAAAGAAGTTGGAGTGGATA 58.373 33.333 0.00 0.00 0.00 2.59
189 190 8.934023 TTGTAAAAAGAAGTTGGAGTGGATAT 57.066 30.769 0.00 0.00 0.00 1.63
190 191 8.934023 TGTAAAAAGAAGTTGGAGTGGATATT 57.066 30.769 0.00 0.00 0.00 1.28
194 195 9.981460 AAAAAGAAGTTGGAGTGGATATTAGAT 57.019 29.630 0.00 0.00 0.00 1.98
195 196 9.981460 AAAAGAAGTTGGAGTGGATATTAGATT 57.019 29.630 0.00 0.00 0.00 2.40
196 197 9.981460 AAAGAAGTTGGAGTGGATATTAGATTT 57.019 29.630 0.00 0.00 0.00 2.17
197 198 9.620259 AAGAAGTTGGAGTGGATATTAGATTTC 57.380 33.333 0.00 0.00 0.00 2.17
198 199 8.214364 AGAAGTTGGAGTGGATATTAGATTTCC 58.786 37.037 0.00 0.00 0.00 3.13
199 200 7.698163 AGTTGGAGTGGATATTAGATTTCCT 57.302 36.000 0.00 0.00 32.38 3.36
200 201 7.512992 AGTTGGAGTGGATATTAGATTTCCTG 58.487 38.462 0.00 0.00 32.38 3.86
201 202 7.127955 AGTTGGAGTGGATATTAGATTTCCTGT 59.872 37.037 0.00 0.00 32.38 4.00
202 203 6.830912 TGGAGTGGATATTAGATTTCCTGTG 58.169 40.000 0.00 0.00 32.38 3.66
203 204 6.615316 TGGAGTGGATATTAGATTTCCTGTGA 59.385 38.462 0.00 0.00 32.38 3.58
204 205 6.931840 GGAGTGGATATTAGATTTCCTGTGAC 59.068 42.308 0.00 0.00 32.38 3.67
205 206 7.419057 GGAGTGGATATTAGATTTCCTGTGACA 60.419 40.741 0.00 0.00 32.38 3.58
206 207 8.038862 AGTGGATATTAGATTTCCTGTGACAT 57.961 34.615 0.00 0.00 32.38 3.06
207 208 7.935755 AGTGGATATTAGATTTCCTGTGACATG 59.064 37.037 0.00 0.00 32.38 3.21
208 209 7.716998 GTGGATATTAGATTTCCTGTGACATGT 59.283 37.037 0.00 0.00 32.38 3.21
209 210 8.933653 TGGATATTAGATTTCCTGTGACATGTA 58.066 33.333 0.00 0.00 32.38 2.29
210 211 9.429359 GGATATTAGATTTCCTGTGACATGTAG 57.571 37.037 0.00 0.00 0.00 2.74
211 212 9.988815 GATATTAGATTTCCTGTGACATGTAGT 57.011 33.333 0.00 0.00 0.00 2.73
214 215 6.605471 AGATTTCCTGTGACATGTAGTACA 57.395 37.500 5.24 5.24 0.00 2.90
215 216 7.004555 AGATTTCCTGTGACATGTAGTACAA 57.995 36.000 7.16 0.00 0.00 2.41
216 217 7.450074 AGATTTCCTGTGACATGTAGTACAAA 58.550 34.615 7.16 0.00 0.00 2.83
217 218 7.936847 AGATTTCCTGTGACATGTAGTACAAAA 59.063 33.333 7.16 4.35 0.00 2.44
218 219 7.490962 TTTCCTGTGACATGTAGTACAAAAG 57.509 36.000 7.16 3.34 0.00 2.27
219 220 6.413783 TCCTGTGACATGTAGTACAAAAGA 57.586 37.500 7.16 0.23 0.00 2.52
220 221 7.004555 TCCTGTGACATGTAGTACAAAAGAT 57.995 36.000 7.16 0.00 0.00 2.40
221 222 7.450074 TCCTGTGACATGTAGTACAAAAGATT 58.550 34.615 7.16 0.00 0.00 2.40
222 223 7.936847 TCCTGTGACATGTAGTACAAAAGATTT 59.063 33.333 7.16 0.00 0.00 2.17
223 224 8.230486 CCTGTGACATGTAGTACAAAAGATTTC 58.770 37.037 7.16 0.00 0.00 2.17
224 225 8.669946 TGTGACATGTAGTACAAAAGATTTCA 57.330 30.769 7.16 0.00 0.00 2.69
225 226 9.283768 TGTGACATGTAGTACAAAAGATTTCAT 57.716 29.630 7.16 0.00 0.00 2.57
244 245 9.971922 GATTTCATAGAAAAACAATCCTATGGG 57.028 33.333 0.00 0.00 39.08 4.00
245 246 9.713684 ATTTCATAGAAAAACAATCCTATGGGA 57.286 29.630 0.00 0.00 46.81 4.37
269 270 8.329203 GATGTAATCCTATGAATCAAAGGACC 57.671 38.462 0.00 0.00 42.08 4.46
270 271 7.206789 TGTAATCCTATGAATCAAAGGACCA 57.793 36.000 0.00 0.00 42.08 4.02
271 272 7.638444 TGTAATCCTATGAATCAAAGGACCAA 58.362 34.615 0.00 0.00 42.08 3.67
272 273 7.556275 TGTAATCCTATGAATCAAAGGACCAAC 59.444 37.037 0.00 0.00 42.08 3.77
273 274 5.512942 TCCTATGAATCAAAGGACCAACA 57.487 39.130 0.00 0.00 34.46 3.33
274 275 6.078456 TCCTATGAATCAAAGGACCAACAT 57.922 37.500 0.00 0.00 34.46 2.71
275 276 7.206789 TCCTATGAATCAAAGGACCAACATA 57.793 36.000 0.00 0.00 34.46 2.29
276 277 7.282585 TCCTATGAATCAAAGGACCAACATAG 58.717 38.462 0.00 0.00 34.46 2.23
277 278 6.488006 CCTATGAATCAAAGGACCAACATAGG 59.512 42.308 0.33 0.33 44.75 2.57
278 279 5.512942 TGAATCAAAGGACCAACATAGGA 57.487 39.130 0.00 0.00 0.00 2.94
279 280 5.886609 TGAATCAAAGGACCAACATAGGAA 58.113 37.500 0.00 0.00 0.00 3.36
280 281 6.310941 TGAATCAAAGGACCAACATAGGAAA 58.689 36.000 0.00 0.00 0.00 3.13
281 282 6.780031 TGAATCAAAGGACCAACATAGGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
282 283 7.288852 TGAATCAAAGGACCAACATAGGAAAAA 59.711 33.333 0.00 0.00 0.00 1.94
312 313 5.109500 AGGATTTCAGTCCTCCAGAAATC 57.891 43.478 15.18 15.18 45.51 2.17
314 315 5.109500 GATTTCAGTCCTCCAGAAATCCT 57.891 43.478 13.38 0.00 45.88 3.24
315 316 6.240549 GATTTCAGTCCTCCAGAAATCCTA 57.759 41.667 13.38 0.00 45.88 2.94
316 317 6.836242 GATTTCAGTCCTCCAGAAATCCTAT 58.164 40.000 13.38 0.00 45.88 2.57
317 318 7.937700 ATTTCAGTCCTCCAGAAATCCTATA 57.062 36.000 0.00 0.00 37.39 1.31
318 319 7.749377 TTTCAGTCCTCCAGAAATCCTATAA 57.251 36.000 0.00 0.00 0.00 0.98
319 320 7.749377 TTCAGTCCTCCAGAAATCCTATAAA 57.251 36.000 0.00 0.00 0.00 1.40
320 321 7.749377 TCAGTCCTCCAGAAATCCTATAAAA 57.251 36.000 0.00 0.00 0.00 1.52
321 322 8.337118 TCAGTCCTCCAGAAATCCTATAAAAT 57.663 34.615 0.00 0.00 0.00 1.82
322 323 8.781951 TCAGTCCTCCAGAAATCCTATAAAATT 58.218 33.333 0.00 0.00 0.00 1.82
323 324 9.061435 CAGTCCTCCAGAAATCCTATAAAATTC 57.939 37.037 0.00 0.00 0.00 2.17
324 325 8.781951 AGTCCTCCAGAAATCCTATAAAATTCA 58.218 33.333 0.00 0.00 0.00 2.57
325 326 9.579932 GTCCTCCAGAAATCCTATAAAATTCAT 57.420 33.333 0.00 0.00 0.00 2.57
342 343 8.913487 AAAATTCATTTGAATCAAAAGAGCCT 57.087 26.923 12.75 0.66 43.41 4.58
343 344 8.913487 AAATTCATTTGAATCAAAAGAGCCTT 57.087 26.923 12.75 6.19 43.41 4.35
373 374 9.702494 AAATTCATTTGAATCAAAAGAGTCCTC 57.298 29.630 12.75 0.00 43.41 3.71
374 375 6.824305 TCATTTGAATCAAAAGAGTCCTCC 57.176 37.500 12.75 0.00 36.90 4.30
375 376 6.306199 TCATTTGAATCAAAAGAGTCCTCCA 58.694 36.000 12.75 0.00 36.90 3.86
376 377 6.432162 TCATTTGAATCAAAAGAGTCCTCCAG 59.568 38.462 12.75 0.00 36.90 3.86
377 378 4.292186 TGAATCAAAAGAGTCCTCCAGG 57.708 45.455 0.00 0.00 0.00 4.45
378 379 3.909995 TGAATCAAAAGAGTCCTCCAGGA 59.090 43.478 0.00 0.00 43.08 3.86
379 380 6.637030 TTTGAATCAAAAGAGTCCTCCAGGAA 60.637 38.462 5.87 0.00 36.84 3.36
380 381 7.913867 TTTGAATCAAAAGAGTCCTCCAGGAAT 60.914 37.037 5.87 0.00 36.84 3.01
402 403 9.232473 GGAATTAGATTTCCTGTGAAAAGTAGT 57.768 33.333 0.00 0.00 43.37 2.73
407 408 8.974060 AGATTTCCTGTGAAAAGTAGTACAAA 57.026 30.769 2.52 0.00 43.37 2.83
408 409 9.403583 AGATTTCCTGTGAAAAGTAGTACAAAA 57.596 29.630 2.52 0.00 43.37 2.44
409 410 9.665264 GATTTCCTGTGAAAAGTAGTACAAAAG 57.335 33.333 2.52 0.00 43.37 2.27
410 411 7.562454 TTCCTGTGAAAAGTAGTACAAAAGG 57.438 36.000 2.52 0.31 0.00 3.11
411 412 6.655930 TCCTGTGAAAAGTAGTACAAAAGGT 58.344 36.000 2.52 0.00 0.00 3.50
412 413 7.114095 TCCTGTGAAAAGTAGTACAAAAGGTT 58.886 34.615 2.52 0.00 0.00 3.50
413 414 7.281549 TCCTGTGAAAAGTAGTACAAAAGGTTC 59.718 37.037 2.52 0.00 0.00 3.62
414 415 7.324354 TGTGAAAAGTAGTACAAAAGGTTCC 57.676 36.000 2.52 0.00 0.00 3.62
415 416 6.885376 TGTGAAAAGTAGTACAAAAGGTTCCA 59.115 34.615 2.52 0.00 0.00 3.53
416 417 7.558444 TGTGAAAAGTAGTACAAAAGGTTCCAT 59.442 33.333 2.52 0.00 0.00 3.41
417 418 9.059260 GTGAAAAGTAGTACAAAAGGTTCCATA 57.941 33.333 2.52 0.00 0.00 2.74
418 419 9.280174 TGAAAAGTAGTACAAAAGGTTCCATAG 57.720 33.333 2.52 0.00 0.00 2.23
419 420 8.631480 AAAAGTAGTACAAAAGGTTCCATAGG 57.369 34.615 2.52 0.00 0.00 2.57
420 421 7.563724 AAGTAGTACAAAAGGTTCCATAGGA 57.436 36.000 2.52 0.00 0.00 2.94
421 422 7.563724 AGTAGTACAAAAGGTTCCATAGGAA 57.436 36.000 2.52 0.00 39.66 3.36
422 423 7.981142 AGTAGTACAAAAGGTTCCATAGGAAA 58.019 34.615 2.52 0.00 43.86 3.13
423 424 8.442374 AGTAGTACAAAAGGTTCCATAGGAAAA 58.558 33.333 2.52 0.00 43.86 2.29
424 425 9.070179 GTAGTACAAAAGGTTCCATAGGAAAAA 57.930 33.333 0.00 0.00 43.86 1.94
425 426 8.721133 AGTACAAAAGGTTCCATAGGAAAAAT 57.279 30.769 0.00 0.00 43.86 1.82
426 427 9.154632 AGTACAAAAGGTTCCATAGGAAAAATT 57.845 29.630 0.00 0.00 43.86 1.82
427 428 9.419297 GTACAAAAGGTTCCATAGGAAAAATTC 57.581 33.333 0.00 0.00 43.86 2.17
442 443 7.050970 GGAAAAATTCCTATGGGGTGTAATC 57.949 40.000 0.00 0.00 46.57 1.75
443 444 6.041637 GGAAAAATTCCTATGGGGTGTAATCC 59.958 42.308 0.00 0.00 46.57 3.01
444 445 6.355588 AAAATTCCTATGGGGTGTAATCCT 57.644 37.500 0.00 0.00 36.25 3.24
445 446 7.474474 AAAATTCCTATGGGGTGTAATCCTA 57.526 36.000 0.00 0.00 36.25 2.94
446 447 7.663501 AAATTCCTATGGGGTGTAATCCTAT 57.336 36.000 0.00 0.00 36.25 2.57
447 448 6.642733 ATTCCTATGGGGTGTAATCCTATG 57.357 41.667 0.00 0.00 36.25 2.23
448 449 5.363124 TCCTATGGGGTGTAATCCTATGA 57.637 43.478 0.00 0.00 36.25 2.15
449 450 5.733000 TCCTATGGGGTGTAATCCTATGAA 58.267 41.667 0.00 0.00 36.25 2.57
450 451 6.339220 TCCTATGGGGTGTAATCCTATGAAT 58.661 40.000 0.00 0.00 36.25 2.57
451 452 6.443849 TCCTATGGGGTGTAATCCTATGAATC 59.556 42.308 0.00 0.00 36.25 2.52
452 453 6.215431 CCTATGGGGTGTAATCCTATGAATCA 59.785 42.308 0.00 0.00 0.00 2.57
453 454 5.985175 TGGGGTGTAATCCTATGAATCAA 57.015 39.130 0.00 0.00 0.00 2.57
454 455 6.334378 TGGGGTGTAATCCTATGAATCAAA 57.666 37.500 0.00 0.00 0.00 2.69
455 456 6.364701 TGGGGTGTAATCCTATGAATCAAAG 58.635 40.000 0.00 0.00 0.00 2.77
456 457 5.770162 GGGGTGTAATCCTATGAATCAAAGG 59.230 44.000 0.00 0.00 0.00 3.11
457 458 6.410388 GGGGTGTAATCCTATGAATCAAAGGA 60.410 42.308 0.00 0.00 43.38 3.36
458 459 6.486993 GGGTGTAATCCTATGAATCAAAGGAC 59.513 42.308 0.00 0.00 42.08 3.85
459 460 6.486993 GGTGTAATCCTATGAATCAAAGGACC 59.513 42.308 0.00 0.00 42.08 4.46
460 461 7.054124 GTGTAATCCTATGAATCAAAGGACCA 58.946 38.462 0.00 0.00 42.08 4.02
461 462 7.556275 GTGTAATCCTATGAATCAAAGGACCAA 59.444 37.037 0.00 0.00 42.08 3.67
462 463 8.281531 TGTAATCCTATGAATCAAAGGACCAAT 58.718 33.333 0.00 0.00 42.08 3.16
463 464 9.793259 GTAATCCTATGAATCAAAGGACCAATA 57.207 33.333 0.00 0.00 42.08 1.90
468 469 9.236006 CCTATGAATCAAAGGACCAATATAAGG 57.764 37.037 0.00 0.00 31.64 2.69
471 472 9.713684 ATGAATCAAAGGACCAATATAAGGAAA 57.286 29.630 0.00 0.00 0.00 3.13
472 473 9.540538 TGAATCAAAGGACCAATATAAGGAAAA 57.459 29.630 0.00 0.00 0.00 2.29
514 515 9.973661 TCCAGAAATCCTATAAACTTCATTTGA 57.026 29.630 0.00 0.00 0.00 2.69
525 526 8.937634 ATAAACTTCATTTGAATCAATGGAGC 57.062 30.769 11.20 0.00 33.01 4.70
526 527 5.334724 ACTTCATTTGAATCAATGGAGCC 57.665 39.130 11.20 0.00 33.01 4.70
527 528 4.161001 ACTTCATTTGAATCAATGGAGCCC 59.839 41.667 11.20 0.00 33.01 5.19
528 529 3.985127 TCATTTGAATCAATGGAGCCCT 58.015 40.909 0.00 0.00 0.00 5.19
529 530 5.128033 TCATTTGAATCAATGGAGCCCTA 57.872 39.130 0.00 0.00 0.00 3.53
530 531 5.708544 TCATTTGAATCAATGGAGCCCTAT 58.291 37.500 0.00 0.00 0.00 2.57
531 532 6.851318 TCATTTGAATCAATGGAGCCCTATA 58.149 36.000 0.00 0.00 0.00 1.31
532 533 7.296856 TCATTTGAATCAATGGAGCCCTATAA 58.703 34.615 0.00 0.00 0.00 0.98
533 534 6.959639 TTTGAATCAATGGAGCCCTATAAC 57.040 37.500 0.00 0.00 0.00 1.89
534 535 4.641396 TGAATCAATGGAGCCCTATAACG 58.359 43.478 0.00 0.00 0.00 3.18
535 536 3.703001 ATCAATGGAGCCCTATAACGG 57.297 47.619 0.00 0.00 0.00 4.44
541 542 3.713963 GCCCTATAACGGCACACG 58.286 61.111 5.76 0.00 46.27 4.49
561 562 6.315393 CACACGTAGCCTTTTCTATAACCAAT 59.685 38.462 0.00 0.00 0.00 3.16
563 564 7.392393 ACACGTAGCCTTTTCTATAACCAATTT 59.608 33.333 0.00 0.00 0.00 1.82
570 571 8.121086 GCCTTTTCTATAACCAATTTCGTCTAC 58.879 37.037 0.00 0.00 0.00 2.59
603 614 0.548989 ATAGGTGGCGCATGGGTTTA 59.451 50.000 10.83 0.00 0.00 2.01
604 615 0.548989 TAGGTGGCGCATGGGTTTAT 59.451 50.000 10.83 0.00 0.00 1.40
613 624 4.102649 GCGCATGGGTTTATACTCAAAAC 58.897 43.478 11.82 0.00 38.51 2.43
614 625 4.142469 GCGCATGGGTTTATACTCAAAACT 60.142 41.667 11.82 0.00 38.51 2.66
615 626 5.065474 GCGCATGGGTTTATACTCAAAACTA 59.935 40.000 11.82 0.00 38.51 2.24
618 629 6.318900 GCATGGGTTTATACTCAAAACTAGCT 59.681 38.462 0.00 0.00 38.51 3.32
631 642 5.359576 TCAAAACTAGCTTGTTTGTCCATGT 59.640 36.000 23.74 6.56 39.71 3.21
632 643 5.438761 AAACTAGCTTGTTTGTCCATGTC 57.561 39.130 22.68 0.00 38.54 3.06
640 651 1.001378 GTTTGTCCATGTCAGGTGTGC 60.001 52.381 0.00 0.00 0.00 4.57
679 690 0.385751 ACTCTATGGCGTGATGACCG 59.614 55.000 0.00 0.00 0.00 4.79
698 709 1.411394 GTCGTGCGTAGTAAGCAACA 58.589 50.000 12.50 0.00 46.97 3.33
717 728 0.107508 AGACAGACATGGCGGATTGG 60.108 55.000 5.42 0.00 40.55 3.16
734 745 2.703409 GCGTCGTAGCAATGCCAG 59.297 61.111 0.00 0.00 37.05 4.85
742 753 1.209504 GTAGCAATGCCAGGTCACCTA 59.790 52.381 0.00 0.00 29.64 3.08
754 765 4.202441 CAGGTCACCTATTCCAATCCTTG 58.798 47.826 0.00 0.00 29.64 3.61
769 780 0.535102 CCTTGGACAAGCGGTTGAGT 60.535 55.000 32.17 12.33 37.10 3.41
772 783 0.249868 TGGACAAGCGGTTGAGTCTG 60.250 55.000 32.17 7.29 37.10 3.51
773 784 1.569479 GGACAAGCGGTTGAGTCTGC 61.569 60.000 32.17 12.49 37.10 4.26
775 786 0.463654 ACAAGCGGTTGAGTCTGCAA 60.464 50.000 32.17 0.00 41.63 4.08
781 792 0.807496 GGTTGAGTCTGCAATCTGGC 59.193 55.000 0.00 0.00 0.00 4.85
782 793 0.445436 GTTGAGTCTGCAATCTGGCG 59.555 55.000 0.00 0.00 36.28 5.69
800 811 1.805943 GCGTCTAGCTACCTACCTAGC 59.194 57.143 0.00 0.00 44.04 3.42
801 812 2.425539 CGTCTAGCTACCTACCTAGCC 58.574 57.143 0.00 0.00 40.18 3.93
812 823 5.873146 ACCTACCTAGCCTCACTTTATTC 57.127 43.478 0.00 0.00 0.00 1.75
825 836 7.162082 CCTCACTTTATTCAGTTGGAACTACT 58.838 38.462 0.00 0.00 38.60 2.57
826 837 7.661847 CCTCACTTTATTCAGTTGGAACTACTT 59.338 37.037 0.00 0.00 38.60 2.24
827 838 9.706691 CTCACTTTATTCAGTTGGAACTACTTA 57.293 33.333 0.00 0.00 38.60 2.24
830 841 8.985805 ACTTTATTCAGTTGGAACTACTTAACG 58.014 33.333 0.00 0.00 38.60 3.18
831 842 8.891671 TTTATTCAGTTGGAACTACTTAACGT 57.108 30.769 0.00 0.00 38.60 3.99
832 843 8.524870 TTATTCAGTTGGAACTACTTAACGTC 57.475 34.615 0.00 0.00 38.60 4.34
833 844 5.518848 TCAGTTGGAACTACTTAACGTCA 57.481 39.130 0.00 0.00 37.08 4.35
834 845 5.526115 TCAGTTGGAACTACTTAACGTCAG 58.474 41.667 0.00 0.00 37.08 3.51
835 846 5.300034 TCAGTTGGAACTACTTAACGTCAGA 59.700 40.000 1.83 0.00 37.08 3.27
836 847 5.401674 CAGTTGGAACTACTTAACGTCAGAC 59.598 44.000 1.83 0.00 37.08 3.51
837 848 5.068198 AGTTGGAACTACTTAACGTCAGACA 59.932 40.000 0.41 0.00 37.52 3.41
838 849 4.863491 TGGAACTACTTAACGTCAGACAC 58.137 43.478 0.41 0.00 0.00 3.67
839 850 4.581824 TGGAACTACTTAACGTCAGACACT 59.418 41.667 0.41 0.00 0.00 3.55
840 851 5.068198 TGGAACTACTTAACGTCAGACACTT 59.932 40.000 0.41 0.00 0.00 3.16
841 852 5.401674 GGAACTACTTAACGTCAGACACTTG 59.598 44.000 0.41 0.00 0.00 3.16
842 853 5.511234 ACTACTTAACGTCAGACACTTGT 57.489 39.130 0.41 0.00 0.00 3.16
843 854 5.899299 ACTACTTAACGTCAGACACTTGTT 58.101 37.500 0.41 0.00 0.00 2.83
844 855 5.747197 ACTACTTAACGTCAGACACTTGTTG 59.253 40.000 0.41 0.00 0.00 3.33
845 856 4.751060 ACTTAACGTCAGACACTTGTTGA 58.249 39.130 0.41 0.00 0.00 3.18
846 857 5.357257 ACTTAACGTCAGACACTTGTTGAT 58.643 37.500 0.41 0.00 0.00 2.57
847 858 5.462398 ACTTAACGTCAGACACTTGTTGATC 59.538 40.000 0.41 0.00 0.00 2.92
848 859 2.755650 ACGTCAGACACTTGTTGATCC 58.244 47.619 0.41 0.00 0.00 3.36
849 860 2.365617 ACGTCAGACACTTGTTGATCCT 59.634 45.455 0.41 0.00 0.00 3.24
850 861 2.989840 CGTCAGACACTTGTTGATCCTC 59.010 50.000 0.41 0.00 0.00 3.71
851 862 3.305676 CGTCAGACACTTGTTGATCCTCT 60.306 47.826 0.41 0.00 0.00 3.69
852 863 4.241681 GTCAGACACTTGTTGATCCTCTC 58.758 47.826 0.00 0.00 0.00 3.20
853 864 3.057245 TCAGACACTTGTTGATCCTCTCG 60.057 47.826 0.00 0.00 0.00 4.04
854 865 3.057245 CAGACACTTGTTGATCCTCTCGA 60.057 47.826 0.00 0.00 0.00 4.04
855 866 3.574396 AGACACTTGTTGATCCTCTCGAA 59.426 43.478 0.00 0.00 0.00 3.71
856 867 4.039245 AGACACTTGTTGATCCTCTCGAAA 59.961 41.667 0.00 0.00 0.00 3.46
857 868 4.703897 ACACTTGTTGATCCTCTCGAAAA 58.296 39.130 0.00 0.00 0.00 2.29
858 869 5.123227 ACACTTGTTGATCCTCTCGAAAAA 58.877 37.500 0.00 0.00 0.00 1.94
897 908 7.494625 TGTTGATCCTTTTACGATGAGTAATCC 59.505 37.037 0.00 0.00 44.03 3.01
898 909 7.119709 TGATCCTTTTACGATGAGTAATCCA 57.880 36.000 0.00 0.00 44.03 3.41
949 965 4.768448 ACAAATTGATGTCCTGATCAGCAA 59.232 37.500 17.76 14.99 43.45 3.91
950 966 5.244402 ACAAATTGATGTCCTGATCAGCAAA 59.756 36.000 17.76 0.00 42.78 3.68
954 970 3.008266 TGATGTCCTGATCAGCAAAGTGA 59.992 43.478 17.76 5.12 0.00 3.41
956 972 3.405831 TGTCCTGATCAGCAAAGTGAAG 58.594 45.455 17.76 0.35 0.00 3.02
957 973 3.181451 TGTCCTGATCAGCAAAGTGAAGT 60.181 43.478 17.76 0.00 0.00 3.01
958 974 3.434984 GTCCTGATCAGCAAAGTGAAGTC 59.565 47.826 17.76 0.00 0.00 3.01
959 975 3.071457 TCCTGATCAGCAAAGTGAAGTCA 59.929 43.478 17.76 0.00 0.00 3.41
962 978 5.428496 TGATCAGCAAAGTGAAGTCAAAG 57.572 39.130 0.00 0.00 0.00 2.77
1077 1147 4.764771 GGGCATGGGGCTTCTGCA 62.765 66.667 0.00 0.00 44.01 4.41
1467 1653 2.572284 GACTACCGCGTGCCTCTT 59.428 61.111 4.92 0.00 0.00 2.85
1866 4100 3.407967 ATCACCCGGCCCATCGTT 61.408 61.111 0.00 0.00 0.00 3.85
2172 4414 5.818136 TCATTTTAAGCTATGTGTGCTCC 57.182 39.130 0.00 0.00 40.22 4.70
2379 5753 1.341679 TGTCTAGATGGTAGCACGGGT 60.342 52.381 0.00 0.00 0.00 5.28
2406 5780 1.098050 AGCCAATTTGGATGACGAGC 58.902 50.000 19.76 0.93 40.96 5.03
2435 5835 1.263356 GCTAGGTGTGTAGGGTGTGA 58.737 55.000 0.00 0.00 0.00 3.58
2437 5837 2.526432 CTAGGTGTGTAGGGTGTGACT 58.474 52.381 0.00 0.00 0.00 3.41
2438 5838 1.802553 AGGTGTGTAGGGTGTGACTT 58.197 50.000 0.00 0.00 0.00 3.01
2628 8518 8.707938 AAAAAGCTTCATCCAATACAATAAGC 57.292 30.769 0.00 0.00 38.46 3.09
2649 8874 3.486383 CTGAAACCCCTTGAAGCAACTA 58.514 45.455 0.00 0.00 0.00 2.24
2694 8920 2.091541 CCACACCTTCAACACACAAGT 58.908 47.619 0.00 0.00 0.00 3.16
2946 9319 2.483714 GCTTCACAGAACTCACTCCACA 60.484 50.000 0.00 0.00 0.00 4.17
2961 9334 9.983024 ACTCACTCCACATAGTAGCTAATATAT 57.017 33.333 13.04 0.00 0.00 0.86
2990 9631 6.681729 ATCTAACAACTCACTAACTCCCAA 57.318 37.500 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.450025 GGGATCACCGAGGAAAACAC 58.550 55.000 0.00 0.00 36.97 3.32
5 6 0.326927 GGGGATCACCGAGGAAAACA 59.673 55.000 0.00 0.00 41.60 2.83
6 7 0.618981 AGGGGATCACCGAGGAAAAC 59.381 55.000 8.77 0.00 41.60 2.43
7 8 0.618458 CAGGGGATCACCGAGGAAAA 59.382 55.000 8.77 0.00 41.60 2.29
9 10 1.080354 ACAGGGGATCACCGAGGAA 59.920 57.895 8.77 0.00 41.60 3.36
10 11 1.685765 CACAGGGGATCACCGAGGA 60.686 63.158 8.77 0.00 41.60 3.71
11 12 1.050988 ATCACAGGGGATCACCGAGG 61.051 60.000 8.77 5.02 41.60 4.63
12 13 0.833287 AATCACAGGGGATCACCGAG 59.167 55.000 8.77 8.23 41.60 4.63
13 14 1.285280 AAATCACAGGGGATCACCGA 58.715 50.000 8.77 0.00 41.60 4.69
14 15 2.128771 AAAATCACAGGGGATCACCG 57.871 50.000 8.77 6.32 41.60 4.94
15 16 3.701664 AGAAAAATCACAGGGGATCACC 58.298 45.455 5.61 5.61 39.11 4.02
16 17 4.766891 TGAAGAAAAATCACAGGGGATCAC 59.233 41.667 0.00 0.00 0.00 3.06
17 18 4.996793 TGAAGAAAAATCACAGGGGATCA 58.003 39.130 0.00 0.00 0.00 2.92
18 19 5.982890 TTGAAGAAAAATCACAGGGGATC 57.017 39.130 0.00 0.00 0.00 3.36
19 20 5.781818 ACATTGAAGAAAAATCACAGGGGAT 59.218 36.000 0.00 0.00 0.00 3.85
20 21 5.147032 ACATTGAAGAAAAATCACAGGGGA 58.853 37.500 0.00 0.00 0.00 4.81
21 22 5.244626 AGACATTGAAGAAAAATCACAGGGG 59.755 40.000 0.00 0.00 0.00 4.79
22 23 6.336842 AGACATTGAAGAAAAATCACAGGG 57.663 37.500 0.00 0.00 0.00 4.45
23 24 9.918630 ATTTAGACATTGAAGAAAAATCACAGG 57.081 29.630 0.00 0.00 0.00 4.00
29 30 9.710900 GGGTTGATTTAGACATTGAAGAAAAAT 57.289 29.630 0.00 0.00 0.00 1.82
30 31 8.923270 AGGGTTGATTTAGACATTGAAGAAAAA 58.077 29.630 0.00 0.00 0.00 1.94
31 32 8.477419 AGGGTTGATTTAGACATTGAAGAAAA 57.523 30.769 0.00 0.00 0.00 2.29
32 33 7.944554 AGAGGGTTGATTTAGACATTGAAGAAA 59.055 33.333 0.00 0.00 0.00 2.52
33 34 7.461749 AGAGGGTTGATTTAGACATTGAAGAA 58.538 34.615 0.00 0.00 0.00 2.52
34 35 7.020827 AGAGGGTTGATTTAGACATTGAAGA 57.979 36.000 0.00 0.00 0.00 2.87
35 36 7.108847 AGAGAGGGTTGATTTAGACATTGAAG 58.891 38.462 0.00 0.00 0.00 3.02
36 37 7.020827 AGAGAGGGTTGATTTAGACATTGAA 57.979 36.000 0.00 0.00 0.00 2.69
37 38 6.627087 AGAGAGGGTTGATTTAGACATTGA 57.373 37.500 0.00 0.00 0.00 2.57
38 39 6.881065 TCAAGAGAGGGTTGATTTAGACATTG 59.119 38.462 0.00 0.00 0.00 2.82
39 40 7.020827 TCAAGAGAGGGTTGATTTAGACATT 57.979 36.000 0.00 0.00 0.00 2.71
40 41 6.627087 TCAAGAGAGGGTTGATTTAGACAT 57.373 37.500 0.00 0.00 0.00 3.06
41 42 6.433847 TTCAAGAGAGGGTTGATTTAGACA 57.566 37.500 0.00 0.00 33.95 3.41
42 43 7.334858 AGATTCAAGAGAGGGTTGATTTAGAC 58.665 38.462 0.00 0.00 33.95 2.59
43 44 7.502060 AGATTCAAGAGAGGGTTGATTTAGA 57.498 36.000 0.00 0.00 33.95 2.10
44 45 9.672673 TTTAGATTCAAGAGAGGGTTGATTTAG 57.327 33.333 0.00 0.00 33.95 1.85
45 46 9.449719 GTTTAGATTCAAGAGAGGGTTGATTTA 57.550 33.333 0.00 0.00 33.95 1.40
46 47 7.944554 TGTTTAGATTCAAGAGAGGGTTGATTT 59.055 33.333 0.00 0.00 33.95 2.17
47 48 7.461749 TGTTTAGATTCAAGAGAGGGTTGATT 58.538 34.615 0.00 0.00 33.95 2.57
48 49 7.020827 TGTTTAGATTCAAGAGAGGGTTGAT 57.979 36.000 0.00 0.00 33.95 2.57
49 50 6.433847 TGTTTAGATTCAAGAGAGGGTTGA 57.566 37.500 0.00 0.00 31.98 3.18
50 51 7.824289 TGTATGTTTAGATTCAAGAGAGGGTTG 59.176 37.037 0.00 0.00 0.00 3.77
51 52 7.824779 GTGTATGTTTAGATTCAAGAGAGGGTT 59.175 37.037 0.00 0.00 0.00 4.11
52 53 7.331791 GTGTATGTTTAGATTCAAGAGAGGGT 58.668 38.462 0.00 0.00 0.00 4.34
53 54 6.763610 GGTGTATGTTTAGATTCAAGAGAGGG 59.236 42.308 0.00 0.00 0.00 4.30
54 55 6.763610 GGGTGTATGTTTAGATTCAAGAGAGG 59.236 42.308 0.00 0.00 0.00 3.69
55 56 7.493971 CAGGGTGTATGTTTAGATTCAAGAGAG 59.506 40.741 0.00 0.00 0.00 3.20
56 57 7.038302 ACAGGGTGTATGTTTAGATTCAAGAGA 60.038 37.037 0.00 0.00 0.00 3.10
57 58 7.065085 CACAGGGTGTATGTTTAGATTCAAGAG 59.935 40.741 0.00 0.00 0.00 2.85
58 59 6.878923 CACAGGGTGTATGTTTAGATTCAAGA 59.121 38.462 0.00 0.00 0.00 3.02
59 60 6.878923 TCACAGGGTGTATGTTTAGATTCAAG 59.121 38.462 0.00 0.00 34.79 3.02
60 61 6.774673 TCACAGGGTGTATGTTTAGATTCAA 58.225 36.000 0.00 0.00 34.79 2.69
61 62 6.367374 TCACAGGGTGTATGTTTAGATTCA 57.633 37.500 0.00 0.00 34.79 2.57
62 63 7.865706 AATCACAGGGTGTATGTTTAGATTC 57.134 36.000 0.00 0.00 34.79 2.52
63 64 8.650143 AAAATCACAGGGTGTATGTTTAGATT 57.350 30.769 0.00 0.00 34.79 2.40
64 65 8.650143 AAAAATCACAGGGTGTATGTTTAGAT 57.350 30.769 0.00 0.00 34.79 1.98
87 88 5.187576 CCTATGAATCAAAGAGGCCCAAAAA 59.812 40.000 0.00 0.00 0.00 1.94
88 89 4.711355 CCTATGAATCAAAGAGGCCCAAAA 59.289 41.667 0.00 0.00 0.00 2.44
89 90 4.017591 TCCTATGAATCAAAGAGGCCCAAA 60.018 41.667 0.00 0.00 0.00 3.28
90 91 3.527253 TCCTATGAATCAAAGAGGCCCAA 59.473 43.478 0.00 0.00 0.00 4.12
91 92 3.122480 TCCTATGAATCAAAGAGGCCCA 58.878 45.455 0.00 0.00 0.00 5.36
92 93 3.864789 TCCTATGAATCAAAGAGGCCC 57.135 47.619 0.00 0.00 0.00 5.80
93 94 6.322201 TCAAAATCCTATGAATCAAAGAGGCC 59.678 38.462 0.00 0.00 0.00 5.19
94 95 7.338800 TCAAAATCCTATGAATCAAAGAGGC 57.661 36.000 4.80 0.00 0.00 4.70
95 96 8.742777 TGTTCAAAATCCTATGAATCAAAGAGG 58.257 33.333 3.58 3.58 37.82 3.69
96 97 9.565213 GTGTTCAAAATCCTATGAATCAAAGAG 57.435 33.333 0.00 0.00 37.82 2.85
97 98 8.236586 CGTGTTCAAAATCCTATGAATCAAAGA 58.763 33.333 0.00 0.00 37.82 2.52
98 99 8.023128 ACGTGTTCAAAATCCTATGAATCAAAG 58.977 33.333 0.00 0.00 37.82 2.77
99 100 7.807433 CACGTGTTCAAAATCCTATGAATCAAA 59.193 33.333 7.58 0.00 37.82 2.69
100 101 7.304735 CACGTGTTCAAAATCCTATGAATCAA 58.695 34.615 7.58 0.00 37.82 2.57
101 102 6.128035 CCACGTGTTCAAAATCCTATGAATCA 60.128 38.462 15.65 0.00 37.82 2.57
102 103 6.258160 CCACGTGTTCAAAATCCTATGAATC 58.742 40.000 15.65 0.00 37.82 2.52
103 104 5.125417 CCCACGTGTTCAAAATCCTATGAAT 59.875 40.000 15.65 0.00 37.82 2.57
104 105 4.457603 CCCACGTGTTCAAAATCCTATGAA 59.542 41.667 15.65 0.00 33.37 2.57
105 106 4.006989 CCCACGTGTTCAAAATCCTATGA 58.993 43.478 15.65 0.00 0.00 2.15
106 107 4.006989 TCCCACGTGTTCAAAATCCTATG 58.993 43.478 15.65 0.00 0.00 2.23
107 108 4.295141 TCCCACGTGTTCAAAATCCTAT 57.705 40.909 15.65 0.00 0.00 2.57
108 109 3.773418 TCCCACGTGTTCAAAATCCTA 57.227 42.857 15.65 0.00 0.00 2.94
109 110 2.649531 TCCCACGTGTTCAAAATCCT 57.350 45.000 15.65 0.00 0.00 3.24
110 111 3.934457 ATTCCCACGTGTTCAAAATCC 57.066 42.857 15.65 0.00 0.00 3.01
111 112 4.698304 TCCTATTCCCACGTGTTCAAAATC 59.302 41.667 15.65 0.00 0.00 2.17
112 113 4.658063 TCCTATTCCCACGTGTTCAAAAT 58.342 39.130 15.65 8.70 0.00 1.82
113 114 4.088056 TCCTATTCCCACGTGTTCAAAA 57.912 40.909 15.65 1.48 0.00 2.44
114 115 3.773418 TCCTATTCCCACGTGTTCAAA 57.227 42.857 15.65 3.31 0.00 2.69
115 116 3.773418 TTCCTATTCCCACGTGTTCAA 57.227 42.857 15.65 4.16 0.00 2.69
116 117 3.773418 TTTCCTATTCCCACGTGTTCA 57.227 42.857 15.65 0.00 0.00 3.18
117 118 4.070009 ACTTTTCCTATTCCCACGTGTTC 58.930 43.478 15.65 0.00 0.00 3.18
118 119 4.094830 ACTTTTCCTATTCCCACGTGTT 57.905 40.909 15.65 0.00 0.00 3.32
119 120 3.782656 ACTTTTCCTATTCCCACGTGT 57.217 42.857 15.65 0.00 0.00 4.49
120 121 5.391629 GCTTTACTTTTCCTATTCCCACGTG 60.392 44.000 9.08 9.08 0.00 4.49
121 122 4.698780 GCTTTACTTTTCCTATTCCCACGT 59.301 41.667 0.00 0.00 0.00 4.49
122 123 4.201783 CGCTTTACTTTTCCTATTCCCACG 60.202 45.833 0.00 0.00 0.00 4.94
123 124 4.438336 GCGCTTTACTTTTCCTATTCCCAC 60.438 45.833 0.00 0.00 0.00 4.61
124 125 3.692593 GCGCTTTACTTTTCCTATTCCCA 59.307 43.478 0.00 0.00 0.00 4.37
125 126 3.945921 AGCGCTTTACTTTTCCTATTCCC 59.054 43.478 2.64 0.00 0.00 3.97
126 127 4.201920 CCAGCGCTTTACTTTTCCTATTCC 60.202 45.833 7.50 0.00 0.00 3.01
127 128 4.634443 TCCAGCGCTTTACTTTTCCTATTC 59.366 41.667 7.50 0.00 0.00 1.75
128 129 4.585879 TCCAGCGCTTTACTTTTCCTATT 58.414 39.130 7.50 0.00 0.00 1.73
129 130 4.192317 CTCCAGCGCTTTACTTTTCCTAT 58.808 43.478 7.50 0.00 0.00 2.57
130 131 3.007614 ACTCCAGCGCTTTACTTTTCCTA 59.992 43.478 7.50 0.00 0.00 2.94
131 132 2.224548 ACTCCAGCGCTTTACTTTTCCT 60.225 45.455 7.50 0.00 0.00 3.36
132 133 2.095718 CACTCCAGCGCTTTACTTTTCC 60.096 50.000 7.50 0.00 0.00 3.13
133 134 2.806244 TCACTCCAGCGCTTTACTTTTC 59.194 45.455 7.50 0.00 0.00 2.29
134 135 2.548480 GTCACTCCAGCGCTTTACTTTT 59.452 45.455 7.50 0.00 0.00 2.27
135 136 2.143925 GTCACTCCAGCGCTTTACTTT 58.856 47.619 7.50 0.00 0.00 2.66
136 137 1.070134 TGTCACTCCAGCGCTTTACTT 59.930 47.619 7.50 0.00 0.00 2.24
137 138 0.679505 TGTCACTCCAGCGCTTTACT 59.320 50.000 7.50 0.00 0.00 2.24
138 139 1.394917 CATGTCACTCCAGCGCTTTAC 59.605 52.381 7.50 0.00 0.00 2.01
139 140 1.275010 TCATGTCACTCCAGCGCTTTA 59.725 47.619 7.50 0.00 0.00 1.85
140 141 0.035317 TCATGTCACTCCAGCGCTTT 59.965 50.000 7.50 0.00 0.00 3.51
141 142 0.390866 CTCATGTCACTCCAGCGCTT 60.391 55.000 7.50 0.00 0.00 4.68
142 143 1.217511 CTCATGTCACTCCAGCGCT 59.782 57.895 2.64 2.64 0.00 5.92
143 144 1.079543 ACTCATGTCACTCCAGCGC 60.080 57.895 0.00 0.00 0.00 5.92
144 145 0.037882 ACACTCATGTCACTCCAGCG 60.038 55.000 0.00 0.00 31.55 5.18
145 146 2.175878 AACACTCATGTCACTCCAGC 57.824 50.000 0.00 0.00 38.45 4.85
146 147 3.470709 ACAAACACTCATGTCACTCCAG 58.529 45.455 0.00 0.00 38.45 3.86
147 148 3.558931 ACAAACACTCATGTCACTCCA 57.441 42.857 0.00 0.00 38.45 3.86
148 149 6.371809 TTTTACAAACACTCATGTCACTCC 57.628 37.500 0.00 0.00 38.45 3.85
149 150 7.693952 TCTTTTTACAAACACTCATGTCACTC 58.306 34.615 0.00 0.00 38.45 3.51
150 151 7.624360 TCTTTTTACAAACACTCATGTCACT 57.376 32.000 0.00 0.00 38.45 3.41
151 152 7.968405 ACTTCTTTTTACAAACACTCATGTCAC 59.032 33.333 0.00 0.00 38.45 3.67
152 153 8.050778 ACTTCTTTTTACAAACACTCATGTCA 57.949 30.769 0.00 0.00 38.45 3.58
153 154 8.798153 CAACTTCTTTTTACAAACACTCATGTC 58.202 33.333 0.00 0.00 38.45 3.06
154 155 7.759433 CCAACTTCTTTTTACAAACACTCATGT 59.241 33.333 0.00 0.00 42.46 3.21
155 156 7.973388 TCCAACTTCTTTTTACAAACACTCATG 59.027 33.333 0.00 0.00 0.00 3.07
156 157 8.062065 TCCAACTTCTTTTTACAAACACTCAT 57.938 30.769 0.00 0.00 0.00 2.90
157 158 7.175990 ACTCCAACTTCTTTTTACAAACACTCA 59.824 33.333 0.00 0.00 0.00 3.41
158 159 7.484959 CACTCCAACTTCTTTTTACAAACACTC 59.515 37.037 0.00 0.00 0.00 3.51
159 160 7.312899 CACTCCAACTTCTTTTTACAAACACT 58.687 34.615 0.00 0.00 0.00 3.55
160 161 6.530181 CCACTCCAACTTCTTTTTACAAACAC 59.470 38.462 0.00 0.00 0.00 3.32
161 162 6.434652 TCCACTCCAACTTCTTTTTACAAACA 59.565 34.615 0.00 0.00 0.00 2.83
162 163 6.859017 TCCACTCCAACTTCTTTTTACAAAC 58.141 36.000 0.00 0.00 0.00 2.93
163 164 7.654022 ATCCACTCCAACTTCTTTTTACAAA 57.346 32.000 0.00 0.00 0.00 2.83
164 165 8.934023 ATATCCACTCCAACTTCTTTTTACAA 57.066 30.769 0.00 0.00 0.00 2.41
165 166 8.934023 AATATCCACTCCAACTTCTTTTTACA 57.066 30.769 0.00 0.00 0.00 2.41
168 169 9.981460 ATCTAATATCCACTCCAACTTCTTTTT 57.019 29.630 0.00 0.00 0.00 1.94
169 170 9.981460 AATCTAATATCCACTCCAACTTCTTTT 57.019 29.630 0.00 0.00 0.00 2.27
170 171 9.981460 AAATCTAATATCCACTCCAACTTCTTT 57.019 29.630 0.00 0.00 0.00 2.52
171 172 9.620259 GAAATCTAATATCCACTCCAACTTCTT 57.380 33.333 0.00 0.00 0.00 2.52
172 173 8.214364 GGAAATCTAATATCCACTCCAACTTCT 58.786 37.037 0.00 0.00 33.30 2.85
173 174 8.214364 AGGAAATCTAATATCCACTCCAACTTC 58.786 37.037 0.00 0.00 35.62 3.01
174 175 7.995488 CAGGAAATCTAATATCCACTCCAACTT 59.005 37.037 0.00 0.00 35.62 2.66
175 176 7.127955 ACAGGAAATCTAATATCCACTCCAACT 59.872 37.037 0.00 0.00 35.62 3.16
176 177 7.227512 CACAGGAAATCTAATATCCACTCCAAC 59.772 40.741 0.00 0.00 35.62 3.77
177 178 7.127186 TCACAGGAAATCTAATATCCACTCCAA 59.873 37.037 0.00 0.00 35.62 3.53
178 179 6.615316 TCACAGGAAATCTAATATCCACTCCA 59.385 38.462 0.00 0.00 35.62 3.86
179 180 6.931840 GTCACAGGAAATCTAATATCCACTCC 59.068 42.308 0.00 0.00 35.62 3.85
180 181 7.500992 TGTCACAGGAAATCTAATATCCACTC 58.499 38.462 0.00 0.00 35.62 3.51
181 182 7.437713 TGTCACAGGAAATCTAATATCCACT 57.562 36.000 0.00 0.00 35.62 4.00
182 183 7.716998 ACATGTCACAGGAAATCTAATATCCAC 59.283 37.037 0.00 0.00 35.62 4.02
183 184 7.805163 ACATGTCACAGGAAATCTAATATCCA 58.195 34.615 0.00 0.00 35.62 3.41
184 185 9.429359 CTACATGTCACAGGAAATCTAATATCC 57.571 37.037 0.00 0.00 0.00 2.59
185 186 9.988815 ACTACATGTCACAGGAAATCTAATATC 57.011 33.333 0.00 0.00 0.00 1.63
188 189 8.758829 TGTACTACATGTCACAGGAAATCTAAT 58.241 33.333 0.00 0.00 0.00 1.73
189 190 8.129496 TGTACTACATGTCACAGGAAATCTAA 57.871 34.615 0.00 0.00 0.00 2.10
190 191 7.712204 TGTACTACATGTCACAGGAAATCTA 57.288 36.000 0.00 0.00 0.00 1.98
191 192 6.605471 TGTACTACATGTCACAGGAAATCT 57.395 37.500 0.00 0.00 0.00 2.40
192 193 7.667043 TTTGTACTACATGTCACAGGAAATC 57.333 36.000 0.00 0.00 0.00 2.17
193 194 7.936847 TCTTTTGTACTACATGTCACAGGAAAT 59.063 33.333 0.00 0.00 0.00 2.17
194 195 7.276658 TCTTTTGTACTACATGTCACAGGAAA 58.723 34.615 0.00 3.71 0.00 3.13
195 196 6.822442 TCTTTTGTACTACATGTCACAGGAA 58.178 36.000 0.00 4.25 0.00 3.36
196 197 6.413783 TCTTTTGTACTACATGTCACAGGA 57.586 37.500 0.00 3.23 0.00 3.86
197 198 7.672983 AATCTTTTGTACTACATGTCACAGG 57.327 36.000 0.00 0.00 0.00 4.00
198 199 8.773645 TGAAATCTTTTGTACTACATGTCACAG 58.226 33.333 0.00 0.00 0.00 3.66
199 200 8.669946 TGAAATCTTTTGTACTACATGTCACA 57.330 30.769 0.00 2.40 0.00 3.58
218 219 9.971922 CCCATAGGATTGTTTTTCTATGAAATC 57.028 33.333 9.85 0.00 40.64 2.17
219 220 9.713684 TCCCATAGGATTGTTTTTCTATGAAAT 57.286 29.630 9.85 0.00 40.64 2.17
244 245 7.939039 TGGTCCTTTGATTCATAGGATTACATC 59.061 37.037 23.34 12.51 41.93 3.06
245 246 7.815383 TGGTCCTTTGATTCATAGGATTACAT 58.185 34.615 23.34 0.00 41.93 2.29
246 247 7.206789 TGGTCCTTTGATTCATAGGATTACA 57.793 36.000 23.34 19.47 41.93 2.41
247 248 7.556275 TGTTGGTCCTTTGATTCATAGGATTAC 59.444 37.037 23.34 20.17 41.93 1.89
248 249 7.638444 TGTTGGTCCTTTGATTCATAGGATTA 58.362 34.615 23.34 14.97 41.93 1.75
249 250 6.493166 TGTTGGTCCTTTGATTCATAGGATT 58.507 36.000 23.34 0.00 41.93 3.01
250 251 6.078456 TGTTGGTCCTTTGATTCATAGGAT 57.922 37.500 23.34 0.00 41.93 3.24
251 252 5.512942 TGTTGGTCCTTTGATTCATAGGA 57.487 39.130 18.57 18.57 38.81 2.94
252 253 6.488006 CCTATGTTGGTCCTTTGATTCATAGG 59.512 42.308 14.95 14.95 43.47 2.57
253 254 7.282585 TCCTATGTTGGTCCTTTGATTCATAG 58.717 38.462 0.00 0.00 35.63 2.23
254 255 7.206789 TCCTATGTTGGTCCTTTGATTCATA 57.793 36.000 0.00 0.00 0.00 2.15
255 256 6.078456 TCCTATGTTGGTCCTTTGATTCAT 57.922 37.500 0.00 0.00 0.00 2.57
256 257 5.512942 TCCTATGTTGGTCCTTTGATTCA 57.487 39.130 0.00 0.00 0.00 2.57
257 258 6.834168 TTTCCTATGTTGGTCCTTTGATTC 57.166 37.500 0.00 0.00 0.00 2.52
258 259 7.610580 TTTTTCCTATGTTGGTCCTTTGATT 57.389 32.000 0.00 0.00 0.00 2.57
294 295 7.749377 TTATAGGATTTCTGGAGGACTGAAA 57.251 36.000 0.00 0.00 46.53 2.69
295 296 7.749377 TTTATAGGATTTCTGGAGGACTGAA 57.251 36.000 0.00 0.00 35.55 3.02
296 297 7.749377 TTTTATAGGATTTCTGGAGGACTGA 57.251 36.000 0.00 0.00 0.00 3.41
297 298 8.986929 AATTTTATAGGATTTCTGGAGGACTG 57.013 34.615 0.00 0.00 0.00 3.51
298 299 8.781951 TGAATTTTATAGGATTTCTGGAGGACT 58.218 33.333 0.00 0.00 0.00 3.85
299 300 8.980481 TGAATTTTATAGGATTTCTGGAGGAC 57.020 34.615 0.00 0.00 0.00 3.85
317 318 8.913487 AGGCTCTTTTGATTCAAATGAATTTT 57.087 26.923 21.30 10.08 44.14 1.82
318 319 8.913487 AAGGCTCTTTTGATTCAAATGAATTT 57.087 26.923 21.30 15.03 44.14 1.82
347 348 9.702494 GAGGACTCTTTTGATTCAAATGAATTT 57.298 29.630 21.30 12.71 44.14 1.82
348 349 8.309656 GGAGGACTCTTTTGATTCAAATGAATT 58.690 33.333 21.30 14.46 44.14 2.17
349 350 7.452501 TGGAGGACTCTTTTGATTCAAATGAAT 59.547 33.333 21.30 15.38 46.54 2.57
350 351 6.777091 TGGAGGACTCTTTTGATTCAAATGAA 59.223 34.615 21.30 0.00 37.17 2.57
351 352 6.306199 TGGAGGACTCTTTTGATTCAAATGA 58.694 36.000 20.32 20.32 35.94 2.57
352 353 6.349944 CCTGGAGGACTCTTTTGATTCAAATG 60.350 42.308 12.39 14.10 37.39 2.32
353 354 5.713861 CCTGGAGGACTCTTTTGATTCAAAT 59.286 40.000 12.39 0.00 37.39 2.32
354 355 5.072741 CCTGGAGGACTCTTTTGATTCAAA 58.927 41.667 7.74 7.74 37.39 2.69
355 356 4.350816 TCCTGGAGGACTCTTTTGATTCAA 59.649 41.667 0.00 0.00 39.78 2.69
356 357 3.909995 TCCTGGAGGACTCTTTTGATTCA 59.090 43.478 0.00 0.00 39.78 2.57
357 358 4.559862 TCCTGGAGGACTCTTTTGATTC 57.440 45.455 0.00 0.00 39.78 2.52
358 359 5.527026 ATTCCTGGAGGACTCTTTTGATT 57.473 39.130 0.00 0.00 45.39 2.57
359 360 5.527026 AATTCCTGGAGGACTCTTTTGAT 57.473 39.130 0.00 0.00 45.39 2.57
360 361 5.785423 TCTAATTCCTGGAGGACTCTTTTGA 59.215 40.000 0.00 0.00 45.39 2.69
361 362 6.054860 TCTAATTCCTGGAGGACTCTTTTG 57.945 41.667 0.00 0.00 45.39 2.44
362 363 6.899892 ATCTAATTCCTGGAGGACTCTTTT 57.100 37.500 0.00 0.00 45.39 2.27
363 364 6.899892 AATCTAATTCCTGGAGGACTCTTT 57.100 37.500 0.00 0.00 45.39 2.52
364 365 6.126623 GGAAATCTAATTCCTGGAGGACTCTT 60.127 42.308 0.00 0.00 45.39 2.85
365 366 5.368230 GGAAATCTAATTCCTGGAGGACTCT 59.632 44.000 0.00 0.00 45.39 3.24
366 367 5.616270 GGAAATCTAATTCCTGGAGGACTC 58.384 45.833 0.00 0.00 45.39 3.36
367 368 5.638530 GGAAATCTAATTCCTGGAGGACT 57.361 43.478 0.00 0.00 45.39 3.85
382 383 8.974060 TTTGTACTACTTTTCACAGGAAATCT 57.026 30.769 0.00 0.00 42.31 2.40
383 384 9.665264 CTTTTGTACTACTTTTCACAGGAAATC 57.335 33.333 0.00 0.00 42.31 2.17
384 385 8.630037 CCTTTTGTACTACTTTTCACAGGAAAT 58.370 33.333 0.00 0.00 42.31 2.17
385 386 7.612633 ACCTTTTGTACTACTTTTCACAGGAAA 59.387 33.333 0.00 0.00 41.13 3.13
386 387 7.114095 ACCTTTTGTACTACTTTTCACAGGAA 58.886 34.615 0.00 0.00 0.00 3.36
387 388 6.655930 ACCTTTTGTACTACTTTTCACAGGA 58.344 36.000 0.00 0.00 0.00 3.86
388 389 6.937436 ACCTTTTGTACTACTTTTCACAGG 57.063 37.500 0.00 0.00 0.00 4.00
389 390 7.066525 TGGAACCTTTTGTACTACTTTTCACAG 59.933 37.037 0.00 0.00 0.00 3.66
390 391 6.885376 TGGAACCTTTTGTACTACTTTTCACA 59.115 34.615 0.00 0.00 0.00 3.58
391 392 7.324354 TGGAACCTTTTGTACTACTTTTCAC 57.676 36.000 0.00 0.00 0.00 3.18
392 393 9.280174 CTATGGAACCTTTTGTACTACTTTTCA 57.720 33.333 0.00 0.00 0.00 2.69
393 394 8.727910 CCTATGGAACCTTTTGTACTACTTTTC 58.272 37.037 0.00 0.00 0.00 2.29
394 395 8.442374 TCCTATGGAACCTTTTGTACTACTTTT 58.558 33.333 0.00 0.00 0.00 2.27
395 396 7.981142 TCCTATGGAACCTTTTGTACTACTTT 58.019 34.615 0.00 0.00 0.00 2.66
396 397 7.563724 TCCTATGGAACCTTTTGTACTACTT 57.436 36.000 0.00 0.00 0.00 2.24
397 398 7.563724 TTCCTATGGAACCTTTTGTACTACT 57.436 36.000 0.00 0.00 36.71 2.57
398 399 8.625786 TTTTCCTATGGAACCTTTTGTACTAC 57.374 34.615 0.00 0.00 41.87 2.73
399 400 9.816787 ATTTTTCCTATGGAACCTTTTGTACTA 57.183 29.630 0.00 0.00 41.87 1.82
400 401 8.721133 ATTTTTCCTATGGAACCTTTTGTACT 57.279 30.769 0.00 0.00 41.87 2.73
401 402 9.419297 GAATTTTTCCTATGGAACCTTTTGTAC 57.581 33.333 0.00 0.00 41.87 2.90
402 403 8.590204 GGAATTTTTCCTATGGAACCTTTTGTA 58.410 33.333 0.00 0.00 46.57 2.41
403 404 7.450074 GGAATTTTTCCTATGGAACCTTTTGT 58.550 34.615 0.00 0.00 46.57 2.83
404 405 7.905604 GGAATTTTTCCTATGGAACCTTTTG 57.094 36.000 0.00 0.00 46.57 2.44
419 420 6.839134 AGGATTACACCCCATAGGAATTTTTC 59.161 38.462 0.00 0.00 39.89 2.29
420 421 6.752091 AGGATTACACCCCATAGGAATTTTT 58.248 36.000 0.00 0.00 39.89 1.94
421 422 6.355588 AGGATTACACCCCATAGGAATTTT 57.644 37.500 0.00 0.00 39.89 1.82
422 423 7.297108 TCATAGGATTACACCCCATAGGAATTT 59.703 37.037 0.00 0.00 39.89 1.82
423 424 6.797540 TCATAGGATTACACCCCATAGGAATT 59.202 38.462 0.00 0.00 39.89 2.17
424 425 6.339220 TCATAGGATTACACCCCATAGGAAT 58.661 40.000 0.00 0.00 39.89 3.01
425 426 5.733000 TCATAGGATTACACCCCATAGGAA 58.267 41.667 0.00 0.00 39.89 3.36
426 427 5.363124 TCATAGGATTACACCCCATAGGA 57.637 43.478 0.00 0.00 39.89 2.94
427 428 6.215431 TGATTCATAGGATTACACCCCATAGG 59.785 42.308 0.00 0.00 43.78 2.57
428 429 7.257790 TGATTCATAGGATTACACCCCATAG 57.742 40.000 0.00 0.00 0.00 2.23
429 430 7.640577 TTGATTCATAGGATTACACCCCATA 57.359 36.000 0.00 0.00 0.00 2.74
430 431 6.529084 TTGATTCATAGGATTACACCCCAT 57.471 37.500 0.00 0.00 0.00 4.00
431 432 5.985175 TTGATTCATAGGATTACACCCCA 57.015 39.130 0.00 0.00 0.00 4.96
432 433 5.770162 CCTTTGATTCATAGGATTACACCCC 59.230 44.000 15.80 0.00 35.14 4.95
433 434 6.486993 GTCCTTTGATTCATAGGATTACACCC 59.513 42.308 23.34 9.49 41.93 4.61
434 435 6.486993 GGTCCTTTGATTCATAGGATTACACC 59.513 42.308 23.34 17.40 41.93 4.16
435 436 7.054124 TGGTCCTTTGATTCATAGGATTACAC 58.946 38.462 23.34 13.50 41.93 2.90
436 437 7.206789 TGGTCCTTTGATTCATAGGATTACA 57.793 36.000 23.34 19.47 41.93 2.41
437 438 8.697507 ATTGGTCCTTTGATTCATAGGATTAC 57.302 34.615 23.34 17.77 41.93 1.89
442 443 9.236006 CCTTATATTGGTCCTTTGATTCATAGG 57.764 37.037 14.95 14.95 34.61 2.57
445 446 9.713684 TTTCCTTATATTGGTCCTTTGATTCAT 57.286 29.630 0.00 0.00 0.00 2.57
446 447 9.540538 TTTTCCTTATATTGGTCCTTTGATTCA 57.459 29.630 0.00 0.00 0.00 2.57
471 472 9.662947 GATTTCTGGAGAATTGAAATCCATTTT 57.337 29.630 13.42 0.00 44.70 1.82
488 489 9.973661 TCAAATGAAGTTTATAGGATTTCTGGA 57.026 29.630 0.00 0.00 0.00 3.86
500 501 7.983484 GGCTCCATTGATTCAAATGAAGTTTAT 59.017 33.333 2.68 0.00 39.46 1.40
501 502 7.322664 GGCTCCATTGATTCAAATGAAGTTTA 58.677 34.615 2.68 0.00 39.46 2.01
502 503 6.168389 GGCTCCATTGATTCAAATGAAGTTT 58.832 36.000 2.68 0.00 39.46 2.66
503 504 5.337813 GGGCTCCATTGATTCAAATGAAGTT 60.338 40.000 2.68 0.00 39.46 2.66
504 505 4.161001 GGGCTCCATTGATTCAAATGAAGT 59.839 41.667 2.68 0.00 39.46 3.01
505 506 4.404715 AGGGCTCCATTGATTCAAATGAAG 59.595 41.667 2.68 0.97 39.46 3.02
506 507 4.355549 AGGGCTCCATTGATTCAAATGAA 58.644 39.130 2.68 0.00 39.46 2.57
507 508 3.985127 AGGGCTCCATTGATTCAAATGA 58.015 40.909 2.68 2.55 39.46 2.57
508 509 7.373493 GTTATAGGGCTCCATTGATTCAAATG 58.627 38.462 2.68 3.08 37.30 2.32
509 510 6.207417 CGTTATAGGGCTCCATTGATTCAAAT 59.793 38.462 2.68 0.00 0.00 2.32
510 511 5.530915 CGTTATAGGGCTCCATTGATTCAAA 59.469 40.000 2.68 0.00 0.00 2.69
511 512 5.063204 CGTTATAGGGCTCCATTGATTCAA 58.937 41.667 0.75 0.75 0.00 2.69
512 513 4.504864 CCGTTATAGGGCTCCATTGATTCA 60.505 45.833 0.00 0.00 0.00 2.57
513 514 4.003648 CCGTTATAGGGCTCCATTGATTC 58.996 47.826 0.00 0.00 0.00 2.52
514 515 3.810743 GCCGTTATAGGGCTCCATTGATT 60.811 47.826 9.09 0.00 45.16 2.57
515 516 2.290323 GCCGTTATAGGGCTCCATTGAT 60.290 50.000 9.09 0.00 45.16 2.57
516 517 1.071699 GCCGTTATAGGGCTCCATTGA 59.928 52.381 9.09 0.00 45.16 2.57
517 518 1.523758 GCCGTTATAGGGCTCCATTG 58.476 55.000 9.09 0.00 45.16 2.82
535 536 4.033702 GGTTATAGAAAAGGCTACGTGTGC 59.966 45.833 0.00 2.03 0.00 4.57
536 537 5.172934 TGGTTATAGAAAAGGCTACGTGTG 58.827 41.667 0.00 0.00 0.00 3.82
537 538 5.410355 TGGTTATAGAAAAGGCTACGTGT 57.590 39.130 0.00 0.00 0.00 4.49
538 539 6.920569 ATTGGTTATAGAAAAGGCTACGTG 57.079 37.500 0.00 0.00 0.00 4.49
539 540 7.201582 CGAAATTGGTTATAGAAAAGGCTACGT 60.202 37.037 0.00 0.00 0.00 3.57
540 541 7.123830 CGAAATTGGTTATAGAAAAGGCTACG 58.876 38.462 0.00 0.00 0.00 3.51
541 542 7.982224 ACGAAATTGGTTATAGAAAAGGCTAC 58.018 34.615 0.00 0.00 0.00 3.58
542 543 8.044908 AGACGAAATTGGTTATAGAAAAGGCTA 58.955 33.333 0.00 0.00 0.00 3.93
543 544 6.884836 AGACGAAATTGGTTATAGAAAAGGCT 59.115 34.615 0.00 0.00 0.00 4.58
550 551 8.141909 CCATCTGTAGACGAAATTGGTTATAGA 58.858 37.037 0.00 0.00 0.00 1.98
552 553 8.014070 TCCATCTGTAGACGAAATTGGTTATA 57.986 34.615 0.00 0.00 0.00 0.98
561 562 2.094182 GCACCTCCATCTGTAGACGAAA 60.094 50.000 0.00 0.00 0.00 3.46
563 564 1.103803 GCACCTCCATCTGTAGACGA 58.896 55.000 0.00 0.00 0.00 4.20
584 585 0.548989 TAAACCCATGCGCCACCTAT 59.451 50.000 4.18 0.00 0.00 2.57
585 586 0.548989 ATAAACCCATGCGCCACCTA 59.451 50.000 4.18 0.00 0.00 3.08
586 587 0.548989 TATAAACCCATGCGCCACCT 59.451 50.000 4.18 0.00 0.00 4.00
587 588 0.666374 GTATAAACCCATGCGCCACC 59.334 55.000 4.18 0.00 0.00 4.61
598 609 9.394477 CAAACAAGCTAGTTTTGAGTATAAACC 57.606 33.333 13.74 0.00 39.55 3.27
603 614 6.770785 TGGACAAACAAGCTAGTTTTGAGTAT 59.229 34.615 17.16 0.41 39.55 2.12
604 615 6.116806 TGGACAAACAAGCTAGTTTTGAGTA 58.883 36.000 17.16 4.53 39.55 2.59
613 624 3.438087 CCTGACATGGACAAACAAGCTAG 59.562 47.826 0.00 0.00 0.00 3.42
614 625 3.181445 ACCTGACATGGACAAACAAGCTA 60.181 43.478 0.00 0.00 0.00 3.32
615 626 2.233271 CCTGACATGGACAAACAAGCT 58.767 47.619 0.00 0.00 0.00 3.74
618 629 2.687425 CACACCTGACATGGACAAACAA 59.313 45.455 0.00 0.00 0.00 2.83
646 657 5.059833 GCCATAGAGTAAATCCAACAGAGG 58.940 45.833 0.00 0.00 0.00 3.69
650 661 4.081365 TCACGCCATAGAGTAAATCCAACA 60.081 41.667 0.00 0.00 0.00 3.33
679 690 1.385743 CTGTTGCTTACTACGCACGAC 59.614 52.381 0.00 0.00 37.07 4.34
698 709 0.107508 CCAATCCGCCATGTCTGTCT 60.108 55.000 0.00 0.00 0.00 3.41
717 728 2.703409 CTGGCATTGCTACGACGC 59.297 61.111 8.82 0.00 0.00 5.19
722 733 0.035056 AGGTGACCTGGCATTGCTAC 60.035 55.000 1.77 0.00 29.57 3.58
724 735 0.921896 ATAGGTGACCTGGCATTGCT 59.078 50.000 15.83 0.00 34.61 3.91
754 765 1.569479 GCAGACTCAACCGCTTGTCC 61.569 60.000 0.00 0.00 0.00 4.02
761 772 1.081892 CCAGATTGCAGACTCAACCG 58.918 55.000 0.00 0.00 0.00 4.44
769 780 0.179100 GCTAGACGCCAGATTGCAGA 60.179 55.000 0.00 0.00 0.00 4.26
772 783 1.492720 GTAGCTAGACGCCAGATTGC 58.507 55.000 0.00 0.00 40.39 3.56
773 784 1.683917 AGGTAGCTAGACGCCAGATTG 59.316 52.381 0.00 0.00 40.39 2.67
775 786 2.506444 GTAGGTAGCTAGACGCCAGAT 58.494 52.381 0.86 0.00 40.39 2.90
794 805 5.491982 CAACTGAATAAAGTGAGGCTAGGT 58.508 41.667 0.00 0.00 0.00 3.08
795 806 4.878397 CCAACTGAATAAAGTGAGGCTAGG 59.122 45.833 0.00 0.00 0.00 3.02
796 807 5.734720 TCCAACTGAATAAAGTGAGGCTAG 58.265 41.667 0.00 0.00 0.00 3.42
798 809 4.640771 TCCAACTGAATAAAGTGAGGCT 57.359 40.909 0.00 0.00 0.00 4.58
799 810 4.762251 AGTTCCAACTGAATAAAGTGAGGC 59.238 41.667 0.00 0.00 37.98 4.70
800 811 7.162082 AGTAGTTCCAACTGAATAAAGTGAGG 58.838 38.462 2.01 0.00 40.07 3.86
801 812 8.608844 AAGTAGTTCCAACTGAATAAAGTGAG 57.391 34.615 2.01 0.00 40.07 3.51
812 823 5.401674 GTCTGACGTTAAGTAGTTCCAACTG 59.598 44.000 2.01 0.00 40.07 3.16
825 836 4.748102 GGATCAACAAGTGTCTGACGTTAA 59.252 41.667 2.98 0.00 0.00 2.01
826 837 4.038763 AGGATCAACAAGTGTCTGACGTTA 59.961 41.667 2.98 0.00 0.00 3.18
827 838 3.131396 GGATCAACAAGTGTCTGACGTT 58.869 45.455 2.98 0.00 0.00 3.99
828 839 2.365617 AGGATCAACAAGTGTCTGACGT 59.634 45.455 2.98 0.00 0.00 4.34
829 840 2.989840 GAGGATCAACAAGTGTCTGACG 59.010 50.000 2.98 0.00 33.17 4.35
830 841 4.241681 GAGAGGATCAACAAGTGTCTGAC 58.758 47.826 0.00 0.00 37.82 3.51
831 842 3.057245 CGAGAGGATCAACAAGTGTCTGA 60.057 47.826 0.00 0.00 37.82 3.27
832 843 3.057245 TCGAGAGGATCAACAAGTGTCTG 60.057 47.826 0.00 0.00 37.82 3.51
833 844 3.157881 TCGAGAGGATCAACAAGTGTCT 58.842 45.455 0.00 0.00 37.82 3.41
834 845 3.577649 TCGAGAGGATCAACAAGTGTC 57.422 47.619 0.00 0.00 37.82 3.67
835 846 4.336889 TTTCGAGAGGATCAACAAGTGT 57.663 40.909 0.00 0.00 37.82 3.55
836 847 5.673337 TTTTTCGAGAGGATCAACAAGTG 57.327 39.130 0.00 0.00 37.82 3.16
860 871 7.700656 CGTAAAAGGATCAACAACTGTCTTTTT 59.299 33.333 9.93 0.00 35.15 1.94
861 872 7.066525 TCGTAAAAGGATCAACAACTGTCTTTT 59.933 33.333 9.69 9.69 36.22 2.27
862 873 6.540914 TCGTAAAAGGATCAACAACTGTCTTT 59.459 34.615 0.00 0.00 0.00 2.52
863 874 6.053005 TCGTAAAAGGATCAACAACTGTCTT 58.947 36.000 0.00 0.00 0.00 3.01
864 875 5.607477 TCGTAAAAGGATCAACAACTGTCT 58.393 37.500 0.00 0.00 0.00 3.41
865 876 5.917541 TCGTAAAAGGATCAACAACTGTC 57.082 39.130 0.00 0.00 0.00 3.51
866 877 5.995282 TCATCGTAAAAGGATCAACAACTGT 59.005 36.000 0.00 0.00 0.00 3.55
867 878 6.147821 ACTCATCGTAAAAGGATCAACAACTG 59.852 38.462 0.00 0.00 0.00 3.16
868 879 6.231211 ACTCATCGTAAAAGGATCAACAACT 58.769 36.000 0.00 0.00 0.00 3.16
869 880 6.481954 ACTCATCGTAAAAGGATCAACAAC 57.518 37.500 0.00 0.00 0.00 3.32
882 893 4.464951 ACACCACTGGATTACTCATCGTAA 59.535 41.667 0.71 0.00 41.97 3.18
914 925 4.403432 ACATCAATTTGTAGGCAGGATTGG 59.597 41.667 0.00 0.00 34.05 3.16
949 965 4.873827 TGCTACGTTTCTTTGACTTCACTT 59.126 37.500 0.00 0.00 0.00 3.16
950 966 4.439057 TGCTACGTTTCTTTGACTTCACT 58.561 39.130 0.00 0.00 0.00 3.41
954 970 2.548480 GGCTGCTACGTTTCTTTGACTT 59.452 45.455 0.00 0.00 0.00 3.01
956 972 1.197036 GGGCTGCTACGTTTCTTTGAC 59.803 52.381 0.00 0.00 0.00 3.18
957 973 1.519408 GGGCTGCTACGTTTCTTTGA 58.481 50.000 0.00 0.00 0.00 2.69
958 974 0.165944 CGGGCTGCTACGTTTCTTTG 59.834 55.000 0.00 0.00 0.00 2.77
959 975 0.953960 CCGGGCTGCTACGTTTCTTT 60.954 55.000 14.03 0.00 0.00 2.52
962 978 2.047560 ACCGGGCTGCTACGTTTC 60.048 61.111 6.32 0.00 0.00 2.78
1027 1079 1.671054 CTACCACCGCCACCACAAG 60.671 63.158 0.00 0.00 0.00 3.16
1698 3932 2.656069 GCACGTCCCCTTCAGCCTA 61.656 63.158 0.00 0.00 0.00 3.93
1866 4100 2.938253 CTTCGTGCAAAGCGCTCA 59.062 55.556 12.06 0.40 43.06 4.26
1878 4112 3.591254 GAAGTCCCGCTGGCTTCGT 62.591 63.158 12.82 0.00 36.08 3.85
1881 4115 1.003233 GAAGAAGTCCCGCTGGCTT 60.003 57.895 4.08 4.08 32.78 4.35
2032 4269 0.032815 TCGACGATGGTCTGCACAAA 59.967 50.000 6.29 0.00 41.16 2.83
2163 4405 1.057275 TTGGTACCCTGGAGCACACA 61.057 55.000 10.07 0.00 0.00 3.72
2172 4414 6.490040 TCTTTGAAGAAGATTTTGGTACCCTG 59.510 38.462 10.07 0.00 30.73 4.45
2186 4450 4.215185 GGCACTCTCCTTTCTTTGAAGAAG 59.785 45.833 6.32 2.40 45.01 2.85
2379 5753 5.066375 CGTCATCCAAATTGGCTGAAGATAA 59.934 40.000 21.42 0.00 43.40 1.75
2406 5780 6.724905 ACCCTACACACCTAGCCTATTATTAG 59.275 42.308 0.00 0.00 0.00 1.73
2438 5838 7.061210 CACATACGGCGATACAAAATTGAAAAA 59.939 33.333 16.62 0.00 0.00 1.94
2448 5848 2.980562 GCCACATACGGCGATACAA 58.019 52.632 16.62 0.00 43.52 2.41
2628 8518 2.310538 AGTTGCTTCAAGGGGTTTCAG 58.689 47.619 0.00 0.00 0.00 3.02
2694 8920 7.981142 AGGTAGGAGAAACCATGTTAAAACTA 58.019 34.615 0.00 0.00 39.64 2.24
2990 9631 0.965866 TCCTTGGAGCGATGTCGAGT 60.966 55.000 6.60 0.00 43.02 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.