Multiple sequence alignment - TraesCS7D01G062500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G062500 chr7D 100.000 6044 0 0 1 6044 34136205 34142248 0.000000e+00 11162.0
1 TraesCS7D01G062500 chr7D 100.000 2498 0 0 6336 8833 34142540 34145037 0.000000e+00 4614.0
2 TraesCS7D01G062500 chr7D 84.155 2354 241 74 3711 5983 551831912 551829610 0.000000e+00 2159.0
3 TraesCS7D01G062500 chr7D 84.982 1991 204 50 4133 6044 436109260 436107286 0.000000e+00 1932.0
4 TraesCS7D01G062500 chr7D 85.575 1435 147 35 4655 6044 616075626 616074207 0.000000e+00 1448.0
5 TraesCS7D01G062500 chr7D 90.743 875 68 10 2647 3513 451050144 451049275 0.000000e+00 1155.0
6 TraesCS7D01G062500 chr7D 88.432 899 90 7 5153 6044 140237958 140237067 0.000000e+00 1072.0
7 TraesCS7D01G062500 chr7D 92.689 424 30 1 3715 4137 140289319 140288896 2.110000e-170 610.0
8 TraesCS7D01G062500 chr7D 87.917 480 44 4 8350 8815 34066610 34067089 3.600000e-153 553.0
9 TraesCS7D01G062500 chr7D 84.776 335 29 10 6534 6853 34065155 34065482 5.150000e-82 316.0
10 TraesCS7D01G062500 chr7D 81.090 312 26 15 6439 6727 34216396 34216697 1.490000e-52 219.0
11 TraesCS7D01G062500 chr7D 81.145 297 24 13 6500 6765 34441062 34440767 8.990000e-50 209.0
12 TraesCS7D01G062500 chr7D 87.500 120 12 3 2477 2594 31374572 31374454 1.550000e-27 135.0
13 TraesCS7D01G062500 chr7D 86.316 95 9 4 6336 6429 33699313 33699222 5.640000e-17 100.0
14 TraesCS7D01G062500 chr7D 79.730 148 21 6 8691 8831 34219580 34219725 2.030000e-16 99.0
15 TraesCS7D01G062500 chr7D 85.263 95 10 4 6336 6429 33816336 33816427 2.630000e-15 95.3
16 TraesCS7D01G062500 chr7D 86.047 86 12 0 7393 7478 34066528 34066613 9.440000e-15 93.5
17 TraesCS7D01G062500 chr7D 97.368 38 1 0 8796 8833 34005802 34005839 2.060000e-06 65.8
18 TraesCS7D01G062500 chr3D 84.836 2407 261 56 3709 6044 253665609 253663236 0.000000e+00 2327.0
19 TraesCS7D01G062500 chr3D 87.664 1143 106 16 4043 5155 419656506 419657643 0.000000e+00 1297.0
20 TraesCS7D01G062500 chr3D 87.585 443 51 4 3708 4149 569594414 569594853 2.200000e-140 510.0
21 TraesCS7D01G062500 chr3D 87.269 432 52 2 3708 4138 497378428 497378857 2.870000e-134 490.0
22 TraesCS7D01G062500 chr3D 88.557 402 22 4 132 512 556164141 556164539 4.830000e-127 466.0
23 TraesCS7D01G062500 chr3D 94.118 289 16 1 1132 1419 556164535 556164823 1.050000e-118 438.0
24 TraesCS7D01G062500 chr7B 84.730 2410 267 43 3726 6044 670055255 670052856 0.000000e+00 2318.0
25 TraesCS7D01G062500 chr7B 84.590 2414 268 49 3726 6044 670039202 670036798 0.000000e+00 2302.0
26 TraesCS7D01G062500 chr7B 88.876 890 66 10 2647 3530 468852948 468852086 0.000000e+00 1064.0
27 TraesCS7D01G062500 chr7B 82.143 168 12 9 245 394 89778672 89778839 2.590000e-25 128.0
28 TraesCS7D01G062500 chrUn 87.176 2082 177 46 4043 6044 101766822 101764751 0.000000e+00 2283.0
29 TraesCS7D01G062500 chr4D 83.102 2231 231 69 3711 5848 493735518 493733341 0.000000e+00 1897.0
30 TraesCS7D01G062500 chr4D 83.555 2110 203 62 4042 6044 474447880 474445808 0.000000e+00 1842.0
31 TraesCS7D01G062500 chr4D 83.434 1648 212 47 4433 6044 337055595 337057217 0.000000e+00 1474.0
32 TraesCS7D01G062500 chr4D 83.978 905 118 22 5153 6038 125246080 125246976 0.000000e+00 843.0
33 TraesCS7D01G062500 chr4D 75.288 2084 315 108 3771 5735 34457991 34455989 0.000000e+00 811.0
34 TraesCS7D01G062500 chr4D 87.616 323 22 3 638 960 376567249 376567553 8.430000e-95 359.0
35 TraesCS7D01G062500 chr4D 92.667 150 11 0 998 1147 376567549 376567698 5.370000e-52 217.0
36 TraesCS7D01G062500 chr2B 84.674 1977 211 36 4133 6044 385538712 385540661 0.000000e+00 1888.0
37 TraesCS7D01G062500 chr2B 80.704 1420 206 45 3708 5087 217410439 217411830 0.000000e+00 1042.0
38 TraesCS7D01G062500 chr2B 78.315 641 77 33 512 1134 5546505 5545909 3.030000e-94 357.0
39 TraesCS7D01G062500 chr2B 87.500 120 12 3 2477 2594 741460675 741460793 1.550000e-27 135.0
40 TraesCS7D01G062500 chr7A 81.310 2397 287 78 3737 6044 697109922 697112246 0.000000e+00 1796.0
41 TraesCS7D01G062500 chr7A 89.273 867 75 9 2647 3510 545949752 545950603 0.000000e+00 1070.0
42 TraesCS7D01G062500 chr7A 81.977 1032 130 38 3711 4694 260262432 260263455 0.000000e+00 824.0
43 TraesCS7D01G062500 chr7A 74.065 2325 408 117 3767 5981 187436317 187434078 0.000000e+00 773.0
44 TraesCS7D01G062500 chr7A 83.673 441 44 19 6439 6853 34502500 34502938 2.990000e-104 390.0
45 TraesCS7D01G062500 chr7A 78.505 642 104 19 512 1138 341433286 341432664 2.990000e-104 390.0
46 TraesCS7D01G062500 chr7A 81.524 433 55 17 3709 4137 626988850 626988439 5.110000e-87 333.0
47 TraesCS7D01G062500 chr7A 81.818 396 47 8 8458 8833 34513880 34514270 8.610000e-80 309.0
48 TraesCS7D01G062500 chr7A 77.824 478 79 22 7031 7487 34530054 34530525 4.060000e-68 270.0
49 TraesCS7D01G062500 chr7A 83.824 272 30 4 134 394 115498806 115499074 6.850000e-61 246.0
50 TraesCS7D01G062500 chr7A 91.304 161 12 2 8208 8368 34507529 34507687 1.490000e-52 219.0
51 TraesCS7D01G062500 chr7A 83.004 253 27 10 6518 6757 34528448 34528697 1.930000e-51 215.0
52 TraesCS7D01G062500 chr7A 88.298 94 9 1 6336 6429 34502372 34502463 2.610000e-20 111.0
53 TraesCS7D01G062500 chr7A 83.333 126 11 5 6336 6457 34312538 34312657 3.370000e-19 108.0
54 TraesCS7D01G062500 chr7A 84.375 96 11 3 6336 6430 34184261 34184353 3.400000e-14 91.6
55 TraesCS7D01G062500 chr7A 83.871 93 13 2 25 115 33832839 33832931 4.390000e-13 87.9
56 TraesCS7D01G062500 chr5B 97.207 931 24 2 1468 2397 692359635 692360564 0.000000e+00 1574.0
57 TraesCS7D01G062500 chr5B 78.859 894 110 40 5158 6020 291799133 291798288 1.690000e-146 531.0
58 TraesCS7D01G062500 chr5B 93.452 336 22 0 1132 1467 692329489 692329824 4.760000e-137 499.0
59 TraesCS7D01G062500 chr5B 79.045 649 84 30 512 1134 489227212 489227834 1.790000e-106 398.0
60 TraesCS7D01G062500 chr5B 78.347 605 81 28 553 1134 506715584 506715007 6.560000e-91 346.0
61 TraesCS7D01G062500 chr5B 78.347 605 81 28 553 1134 506748791 506748214 6.560000e-91 346.0
62 TraesCS7D01G062500 chr5B 86.920 237 24 3 158 394 338956948 338956719 8.800000e-65 259.0
63 TraesCS7D01G062500 chr5B 87.124 233 20 4 290 512 692329261 692329493 1.140000e-63 255.0
64 TraesCS7D01G062500 chr5D 87.925 1325 114 21 3732 5033 288385984 288384683 0.000000e+00 1519.0
65 TraesCS7D01G062500 chr5D 86.047 1118 103 22 4966 6044 362874214 362875317 0.000000e+00 1151.0
66 TraesCS7D01G062500 chr5D 79.688 640 85 33 513 1134 518917832 518918444 3.810000e-113 420.0
67 TraesCS7D01G062500 chr5D 91.463 82 6 1 2477 2557 370302322 370302241 2.610000e-20 111.0
68 TraesCS7D01G062500 chr4B 85.903 1213 119 23 3962 5155 386200660 386199481 0.000000e+00 1245.0
69 TraesCS7D01G062500 chr4B 86.518 1031 111 18 4043 5058 310149460 310148443 0.000000e+00 1109.0
70 TraesCS7D01G062500 chr4A 80.493 1461 191 51 7268 8670 690855776 690857200 0.000000e+00 1033.0
71 TraesCS7D01G062500 chr4A 95.873 630 23 2 512 1141 589811776 589812402 0.000000e+00 1016.0
72 TraesCS7D01G062500 chr4A 78.512 1438 199 52 6977 8345 690665709 690667105 0.000000e+00 843.0
73 TraesCS7D01G062500 chr4A 79.668 1146 163 32 6898 7998 690796542 690797662 0.000000e+00 761.0
74 TraesCS7D01G062500 chr4A 80.433 1017 150 30 4171 5155 177517606 177516607 0.000000e+00 730.0
75 TraesCS7D01G062500 chr4A 87.304 638 62 16 8208 8833 691815847 691816477 0.000000e+00 712.0
76 TraesCS7D01G062500 chr4A 79.724 1085 134 48 7807 8833 691192547 691191491 0.000000e+00 706.0
77 TraesCS7D01G062500 chr4A 90.845 426 21 7 6439 6853 691231054 691230636 1.000000e-153 555.0
78 TraesCS7D01G062500 chr4A 89.703 437 19 10 6439 6853 691814047 691814479 1.310000e-147 534.0
79 TraesCS7D01G062500 chr4A 86.051 509 37 10 7717 8207 691815393 691815885 4.730000e-142 516.0
80 TraesCS7D01G062500 chr4A 90.099 404 23 6 6467 6853 690662711 690663114 7.910000e-140 508.0
81 TraesCS7D01G062500 chr4A 91.986 287 13 5 6439 6717 690845905 690846189 2.310000e-105 394.0
82 TraesCS7D01G062500 chr4A 78.328 646 79 42 517 1138 40284975 40284367 2.340000e-95 361.0
83 TraesCS7D01G062500 chr4A 88.380 284 15 7 6555 6820 691194787 691194504 8.550000e-85 326.0
84 TraesCS7D01G062500 chr4A 79.399 466 81 10 7035 7487 691142880 691142417 1.850000e-81 315.0
85 TraesCS7D01G062500 chr4A 81.193 436 17 18 6439 6823 690795499 690795920 3.120000e-74 291.0
86 TraesCS7D01G062500 chr4A 84.000 300 23 16 6518 6793 690892354 690892652 1.890000e-66 265.0
87 TraesCS7D01G062500 chr4A 86.364 242 22 1 159 389 598223995 598224236 4.090000e-63 254.0
88 TraesCS7D01G062500 chr4A 84.615 169 10 10 6519 6671 690917264 690917432 4.270000e-33 154.0
89 TraesCS7D01G062500 chr4A 78.455 246 39 11 6336 6573 691809965 691810204 1.990000e-31 148.0
90 TraesCS7D01G062500 chr4A 91.860 86 7 0 7516 7601 691815139 691815224 4.330000e-23 121.0
91 TraesCS7D01G062500 chr4A 92.593 81 6 0 7598 7678 691815303 691815383 5.600000e-22 117.0
92 TraesCS7D01G062500 chr4A 95.312 64 3 0 8752 8815 690878193 690878256 1.570000e-17 102.0
93 TraesCS7D01G062500 chr4A 94.030 67 3 1 6852 6918 691815071 691815136 5.640000e-17 100.0
94 TraesCS7D01G062500 chr4A 85.263 95 10 4 6336 6429 691649072 691649163 2.630000e-15 95.3
95 TraesCS7D01G062500 chr4A 85.106 94 8 4 6336 6429 691659581 691659668 3.400000e-14 91.6
96 TraesCS7D01G062500 chr4A 84.158 101 7 6 6338 6429 690795362 690795462 1.220000e-13 89.8
97 TraesCS7D01G062500 chr4A 78.065 155 19 10 8691 8831 690943599 690943752 5.680000e-12 84.2
98 TraesCS7D01G062500 chr4A 82.524 103 11 4 8736 8831 691156343 691156241 5.680000e-12 84.2
99 TraesCS7D01G062500 chr4A 80.800 125 5 8 6440 6564 690917459 690917564 7.350000e-11 80.5
100 TraesCS7D01G062500 chr4A 100.000 37 0 0 8797 8833 691286695 691286659 1.590000e-07 69.4
101 TraesCS7D01G062500 chr4A 100.000 34 0 0 8797 8830 691651761 691651794 7.400000e-06 63.9
102 TraesCS7D01G062500 chr2A 81.245 1365 172 42 4133 5445 73866965 73868297 0.000000e+00 1026.0
103 TraesCS7D01G062500 chr2A 80.458 1049 168 28 4063 5088 504058788 504057754 0.000000e+00 767.0
104 TraesCS7D01G062500 chr2D 94.453 631 24 6 508 1138 519136094 519135475 0.000000e+00 961.0
105 TraesCS7D01G062500 chr2D 80.422 996 143 38 3711 4688 633574277 633573316 0.000000e+00 712.0
106 TraesCS7D01G062500 chr2D 79.375 640 80 30 512 1138 100187955 100187355 3.840000e-108 403.0
107 TraesCS7D01G062500 chr2D 87.857 140 16 1 255 394 513461334 513461472 7.100000e-36 163.0
108 TraesCS7D01G062500 chr1A 94.240 625 20 4 512 1134 448009330 448008720 0.000000e+00 941.0
109 TraesCS7D01G062500 chr1A 84.108 667 64 15 3708 4373 6788184 6787559 2.730000e-169 606.0
110 TraesCS7D01G062500 chr5A 96.257 374 8 4 771 1138 440753346 440753719 7.580000e-170 608.0
111 TraesCS7D01G062500 chr5A 96.043 278 10 1 508 785 440753050 440753326 1.350000e-122 451.0
112 TraesCS7D01G062500 chr5A 86.694 248 21 7 159 394 356477591 356477838 1.890000e-66 265.0
113 TraesCS7D01G062500 chr5A 82.039 206 22 10 893 1096 16409435 16409627 2.550000e-35 161.0
114 TraesCS7D01G062500 chr1D 87.727 440 52 2 3711 4149 420236120 420235682 6.120000e-141 512.0
115 TraesCS7D01G062500 chr1D 85.833 120 14 3 2477 2594 423887253 423887135 3.350000e-24 124.0
116 TraesCS7D01G062500 chr3B 89.552 402 18 4 132 512 739165765 739166163 1.030000e-133 488.0
117 TraesCS7D01G062500 chr3B 95.486 288 12 1 1132 1418 739166159 739166446 8.080000e-125 459.0
118 TraesCS7D01G062500 chr3B 91.176 238 19 2 1135 1371 739715662 739715898 1.110000e-83 322.0
119 TraesCS7D01G062500 chr3B 85.950 242 32 2 512 752 777023449 777023689 3.160000e-64 257.0
120 TraesCS7D01G062500 chr3B 97.297 37 0 1 3707 3742 606224231 606224267 2.660000e-05 62.1
121 TraesCS7D01G062500 chr3A 92.705 329 23 1 3821 4149 729687664 729687991 2.890000e-129 473.0
122 TraesCS7D01G062500 chr3A 88.557 402 22 4 132 512 693176089 693176487 4.830000e-127 466.0
123 TraesCS7D01G062500 chr3A 95.502 289 12 1 1132 1419 693176483 693176771 2.250000e-125 460.0
124 TraesCS7D01G062500 chr6D 81.250 112 14 4 28 137 318567614 318567508 5.680000e-12 84.2
125 TraesCS7D01G062500 chr6B 85.000 80 10 2 38 115 4466814 4466893 7.350000e-11 80.5
126 TraesCS7D01G062500 chr6B 88.679 53 5 1 5993 6044 617985167 617985115 7.400000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G062500 chr7D 34136205 34145037 8832 False 7888.000000 11162 100.000000 1 8833 2 chr7D.!!$F4 8832
1 TraesCS7D01G062500 chr7D 551829610 551831912 2302 True 2159.000000 2159 84.155000 3711 5983 1 chr7D.!!$R8 2272
2 TraesCS7D01G062500 chr7D 436107286 436109260 1974 True 1932.000000 1932 84.982000 4133 6044 1 chr7D.!!$R6 1911
3 TraesCS7D01G062500 chr7D 616074207 616075626 1419 True 1448.000000 1448 85.575000 4655 6044 1 chr7D.!!$R9 1389
4 TraesCS7D01G062500 chr7D 451049275 451050144 869 True 1155.000000 1155 90.743000 2647 3513 1 chr7D.!!$R7 866
5 TraesCS7D01G062500 chr7D 140237067 140237958 891 True 1072.000000 1072 88.432000 5153 6044 1 chr7D.!!$R4 891
6 TraesCS7D01G062500 chr7D 34065155 34067089 1934 False 320.833333 553 86.246667 6534 8815 3 chr7D.!!$F3 2281
7 TraesCS7D01G062500 chr3D 253663236 253665609 2373 True 2327.000000 2327 84.836000 3709 6044 1 chr3D.!!$R1 2335
8 TraesCS7D01G062500 chr3D 419656506 419657643 1137 False 1297.000000 1297 87.664000 4043 5155 1 chr3D.!!$F1 1112
9 TraesCS7D01G062500 chr3D 556164141 556164823 682 False 452.000000 466 91.337500 132 1419 2 chr3D.!!$F4 1287
10 TraesCS7D01G062500 chr7B 670052856 670055255 2399 True 2318.000000 2318 84.730000 3726 6044 1 chr7B.!!$R3 2318
11 TraesCS7D01G062500 chr7B 670036798 670039202 2404 True 2302.000000 2302 84.590000 3726 6044 1 chr7B.!!$R2 2318
12 TraesCS7D01G062500 chr7B 468852086 468852948 862 True 1064.000000 1064 88.876000 2647 3530 1 chr7B.!!$R1 883
13 TraesCS7D01G062500 chrUn 101764751 101766822 2071 True 2283.000000 2283 87.176000 4043 6044 1 chrUn.!!$R1 2001
14 TraesCS7D01G062500 chr4D 493733341 493735518 2177 True 1897.000000 1897 83.102000 3711 5848 1 chr4D.!!$R3 2137
15 TraesCS7D01G062500 chr4D 474445808 474447880 2072 True 1842.000000 1842 83.555000 4042 6044 1 chr4D.!!$R2 2002
16 TraesCS7D01G062500 chr4D 337055595 337057217 1622 False 1474.000000 1474 83.434000 4433 6044 1 chr4D.!!$F2 1611
17 TraesCS7D01G062500 chr4D 125246080 125246976 896 False 843.000000 843 83.978000 5153 6038 1 chr4D.!!$F1 885
18 TraesCS7D01G062500 chr4D 34455989 34457991 2002 True 811.000000 811 75.288000 3771 5735 1 chr4D.!!$R1 1964
19 TraesCS7D01G062500 chr2B 385538712 385540661 1949 False 1888.000000 1888 84.674000 4133 6044 1 chr2B.!!$F2 1911
20 TraesCS7D01G062500 chr2B 217410439 217411830 1391 False 1042.000000 1042 80.704000 3708 5087 1 chr2B.!!$F1 1379
21 TraesCS7D01G062500 chr2B 5545909 5546505 596 True 357.000000 357 78.315000 512 1134 1 chr2B.!!$R1 622
22 TraesCS7D01G062500 chr7A 697109922 697112246 2324 False 1796.000000 1796 81.310000 3737 6044 1 chr7A.!!$F9 2307
23 TraesCS7D01G062500 chr7A 545949752 545950603 851 False 1070.000000 1070 89.273000 2647 3510 1 chr7A.!!$F8 863
24 TraesCS7D01G062500 chr7A 260262432 260263455 1023 False 824.000000 824 81.977000 3711 4694 1 chr7A.!!$F7 983
25 TraesCS7D01G062500 chr7A 187434078 187436317 2239 True 773.000000 773 74.065000 3767 5981 1 chr7A.!!$R1 2214
26 TraesCS7D01G062500 chr7A 341432664 341433286 622 True 390.000000 390 78.505000 512 1138 1 chr7A.!!$R2 626
27 TraesCS7D01G062500 chr7A 34502372 34502938 566 False 250.500000 390 85.985500 6336 6853 2 chr7A.!!$F10 517
28 TraesCS7D01G062500 chr7A 34528448 34530525 2077 False 242.500000 270 80.414000 6518 7487 2 chr7A.!!$F11 969
29 TraesCS7D01G062500 chr5B 692359635 692360564 929 False 1574.000000 1574 97.207000 1468 2397 1 chr5B.!!$F2 929
30 TraesCS7D01G062500 chr5B 291798288 291799133 845 True 531.000000 531 78.859000 5158 6020 1 chr5B.!!$R1 862
31 TraesCS7D01G062500 chr5B 489227212 489227834 622 False 398.000000 398 79.045000 512 1134 1 chr5B.!!$F1 622
32 TraesCS7D01G062500 chr5B 692329261 692329824 563 False 377.000000 499 90.288000 290 1467 2 chr5B.!!$F3 1177
33 TraesCS7D01G062500 chr5B 506715007 506715584 577 True 346.000000 346 78.347000 553 1134 1 chr5B.!!$R3 581
34 TraesCS7D01G062500 chr5B 506748214 506748791 577 True 346.000000 346 78.347000 553 1134 1 chr5B.!!$R4 581
35 TraesCS7D01G062500 chr5D 288384683 288385984 1301 True 1519.000000 1519 87.925000 3732 5033 1 chr5D.!!$R1 1301
36 TraesCS7D01G062500 chr5D 362874214 362875317 1103 False 1151.000000 1151 86.047000 4966 6044 1 chr5D.!!$F1 1078
37 TraesCS7D01G062500 chr5D 518917832 518918444 612 False 420.000000 420 79.688000 513 1134 1 chr5D.!!$F2 621
38 TraesCS7D01G062500 chr4B 386199481 386200660 1179 True 1245.000000 1245 85.903000 3962 5155 1 chr4B.!!$R2 1193
39 TraesCS7D01G062500 chr4B 310148443 310149460 1017 True 1109.000000 1109 86.518000 4043 5058 1 chr4B.!!$R1 1015
40 TraesCS7D01G062500 chr4A 690855776 690857200 1424 False 1033.000000 1033 80.493000 7268 8670 1 chr4A.!!$F4 1402
41 TraesCS7D01G062500 chr4A 589811776 589812402 626 False 1016.000000 1016 95.873000 512 1141 1 chr4A.!!$F1 629
42 TraesCS7D01G062500 chr4A 177516607 177517606 999 True 730.000000 730 80.433000 4171 5155 1 chr4A.!!$R2 984
43 TraesCS7D01G062500 chr4A 690662711 690667105 4394 False 675.500000 843 84.305500 6467 8345 2 chr4A.!!$F9 1878
44 TraesCS7D01G062500 chr4A 691191491 691194787 3296 True 516.000000 706 84.052000 6555 8833 2 chr4A.!!$R7 2278
45 TraesCS7D01G062500 chr4A 690795362 690797662 2300 False 380.600000 761 81.673000 6338 7998 3 chr4A.!!$F10 1660
46 TraesCS7D01G062500 chr4A 40284367 40284975 608 True 361.000000 361 78.328000 517 1138 1 chr4A.!!$R1 621
47 TraesCS7D01G062500 chr4A 691809965 691816477 6512 False 321.142857 712 88.570857 6336 8833 7 chr4A.!!$F13 2497
48 TraesCS7D01G062500 chr2A 73866965 73868297 1332 False 1026.000000 1026 81.245000 4133 5445 1 chr2A.!!$F1 1312
49 TraesCS7D01G062500 chr2A 504057754 504058788 1034 True 767.000000 767 80.458000 4063 5088 1 chr2A.!!$R1 1025
50 TraesCS7D01G062500 chr2D 519135475 519136094 619 True 961.000000 961 94.453000 508 1138 1 chr2D.!!$R2 630
51 TraesCS7D01G062500 chr2D 633573316 633574277 961 True 712.000000 712 80.422000 3711 4688 1 chr2D.!!$R3 977
52 TraesCS7D01G062500 chr2D 100187355 100187955 600 True 403.000000 403 79.375000 512 1138 1 chr2D.!!$R1 626
53 TraesCS7D01G062500 chr1A 448008720 448009330 610 True 941.000000 941 94.240000 512 1134 1 chr1A.!!$R2 622
54 TraesCS7D01G062500 chr1A 6787559 6788184 625 True 606.000000 606 84.108000 3708 4373 1 chr1A.!!$R1 665
55 TraesCS7D01G062500 chr5A 440753050 440753719 669 False 529.500000 608 96.150000 508 1138 2 chr5A.!!$F3 630
56 TraesCS7D01G062500 chr3B 739165765 739166446 681 False 473.500000 488 92.519000 132 1418 2 chr3B.!!$F4 1286
57 TraesCS7D01G062500 chr3A 693176089 693176771 682 False 463.000000 466 92.029500 132 1419 2 chr3A.!!$F2 1287

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.179171 CCTCGCTTCGTCGCTAAGAA 60.179 55.000 0.00 0.00 0.00 2.52 F
114 115 1.198408 TCGCTTCGTCGCTAAGAAAGA 59.802 47.619 0.00 0.00 0.00 2.52 F
139 140 1.271434 GGGAGACAAACACCTCCTTCC 60.271 57.143 0.00 0.00 46.26 3.46 F
143 144 1.343465 GACAAACACCTCCTTCCTCGA 59.657 52.381 0.00 0.00 0.00 4.04 F
856 944 1.823295 ACGATGGCGGCATACTTCT 59.177 52.632 25.86 1.37 43.17 2.85 F
2435 2546 0.096281 AACGTGACTGTTTGTGTGCG 59.904 50.000 0.00 0.00 0.00 5.34 F
2526 2637 0.038744 ATCTGCCTTGTGAACTGGGG 59.961 55.000 0.00 0.00 0.00 4.96 F
2542 2653 0.396278 GGGGCAGAGGCAGCTTTAAT 60.396 55.000 0.00 0.00 43.71 1.40 F
3569 3693 0.037232 ACCTTCTAGACGCCAACAGC 60.037 55.000 0.00 0.00 38.52 4.40 F
3570 3694 0.037326 CCTTCTAGACGCCAACAGCA 60.037 55.000 0.00 0.00 44.04 4.41 F
4890 5426 0.179215 CTTGCGCTCATTGAACGTCC 60.179 55.000 9.73 0.00 0.00 4.79 F
5115 5720 0.383590 CGAGCTCGTCATCCATGTCT 59.616 55.000 27.79 0.00 34.11 3.41 F
6611 11440 0.179217 TACGCACGCACGTAGTAGTG 60.179 55.000 6.45 0.00 46.19 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1014 1121 3.133691 CGTCCACATGAATCCCTGTATG 58.866 50.000 0.00 0.0 0.00 2.39 R
1471 1581 3.895656 AGTAGCTTGTTGTACTCCTCACA 59.104 43.478 0.00 0.0 0.00 3.58 R
1606 1717 4.021016 AGCGACAGAAAATAGTGAAGGTCT 60.021 41.667 0.00 0.0 0.00 3.85 R
1738 1849 4.927267 TCCTTGAACTTGTACATCCCAT 57.073 40.909 0.00 0.0 0.00 4.00 R
2507 2618 0.038744 CCCCAGTTCACAAGGCAGAT 59.961 55.000 0.00 0.0 0.00 2.90 R
3550 3674 0.037232 GCTGTTGGCGTCTAGAAGGT 60.037 55.000 7.81 0.0 0.00 3.50 R
3551 3675 0.037326 TGCTGTTGGCGTCTAGAAGG 60.037 55.000 7.81 0.0 45.43 3.46 R
3706 3830 0.249657 CGGCTGGAGATGCTCTAACC 60.250 60.000 0.00 0.0 0.00 2.85 R
4636 5162 0.459585 TCGGCTGCGTAGATGGTTTC 60.460 55.000 4.08 0.0 0.00 2.78 R
5194 5826 0.533085 TCGTCACATTTCGGCAACCA 60.533 50.000 0.00 0.0 0.00 3.67 R
6596 11391 0.039798 ACACCACTACTACGTGCGTG 60.040 55.000 7.55 0.0 39.65 5.34 R
6957 13027 0.675633 TGAAAAGGCAAAGCTCCAGC 59.324 50.000 0.00 0.0 42.49 4.85 R
8099 16545 0.179215 GCCTTTGCGATTCTCGTGTG 60.179 55.000 0.00 0.0 42.81 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.671070 AGCCCCACGTCATCAAGG 59.329 61.111 0.00 0.00 0.00 3.61
18 19 3.134127 GCCCCACGTCATCAAGGC 61.134 66.667 0.00 0.00 0.00 4.35
25 26 2.081526 CGTCATCAAGGCGTTCAGG 58.918 57.895 0.00 0.00 41.32 3.86
26 27 0.670546 CGTCATCAAGGCGTTCAGGT 60.671 55.000 0.00 0.00 41.32 4.00
27 28 1.079503 GTCATCAAGGCGTTCAGGTC 58.920 55.000 0.00 0.00 0.00 3.85
28 29 0.684535 TCATCAAGGCGTTCAGGTCA 59.315 50.000 0.00 0.00 0.00 4.02
29 30 1.071542 TCATCAAGGCGTTCAGGTCAA 59.928 47.619 0.00 0.00 0.00 3.18
30 31 2.086869 CATCAAGGCGTTCAGGTCAAT 58.913 47.619 0.00 0.00 0.00 2.57
31 32 1.808411 TCAAGGCGTTCAGGTCAATC 58.192 50.000 0.00 0.00 0.00 2.67
32 33 0.443869 CAAGGCGTTCAGGTCAATCG 59.556 55.000 0.00 0.00 0.00 3.34
33 34 0.673644 AAGGCGTTCAGGTCAATCGG 60.674 55.000 0.00 0.00 0.00 4.18
34 35 2.106683 GGCGTTCAGGTCAATCGGG 61.107 63.158 0.00 0.00 0.00 5.14
35 36 1.079405 GCGTTCAGGTCAATCGGGA 60.079 57.895 0.00 0.00 0.00 5.14
36 37 1.084370 GCGTTCAGGTCAATCGGGAG 61.084 60.000 0.00 0.00 0.00 4.30
37 38 0.530744 CGTTCAGGTCAATCGGGAGA 59.469 55.000 0.00 0.00 46.90 3.71
38 39 1.469940 CGTTCAGGTCAATCGGGAGAG 60.470 57.143 0.00 0.00 45.48 3.20
39 40 1.825474 GTTCAGGTCAATCGGGAGAGA 59.175 52.381 0.00 0.00 45.48 3.10
40 41 1.769026 TCAGGTCAATCGGGAGAGAG 58.231 55.000 0.00 0.00 45.48 3.20
41 42 1.285078 TCAGGTCAATCGGGAGAGAGA 59.715 52.381 0.00 0.00 45.48 3.10
42 43 2.091610 TCAGGTCAATCGGGAGAGAGAT 60.092 50.000 0.00 0.00 45.48 2.75
43 44 2.697751 CAGGTCAATCGGGAGAGAGATT 59.302 50.000 0.00 0.00 45.48 2.40
44 45 2.962421 AGGTCAATCGGGAGAGAGATTC 59.038 50.000 0.00 0.00 45.48 2.52
45 46 2.287909 GGTCAATCGGGAGAGAGATTCG 60.288 54.545 0.00 0.00 45.48 3.34
46 47 1.338337 TCAATCGGGAGAGAGATTCGC 59.662 52.381 0.00 0.00 45.48 4.70
48 49 2.136196 ATCGGGAGAGAGATTCGCGC 62.136 60.000 0.00 0.00 46.55 6.86
49 50 2.840066 CGGGAGAGAGATTCGCGCT 61.840 63.158 5.56 0.00 42.58 5.92
50 51 1.299773 GGGAGAGAGATTCGCGCTG 60.300 63.158 5.56 0.00 35.99 5.18
51 52 1.948635 GGAGAGAGATTCGCGCTGC 60.949 63.158 5.56 0.00 0.00 5.25
52 53 1.948635 GAGAGAGATTCGCGCTGCC 60.949 63.158 5.56 0.00 0.00 4.85
53 54 2.964389 GAGAGATTCGCGCTGCCC 60.964 66.667 5.56 0.00 0.00 5.36
54 55 3.723235 GAGAGATTCGCGCTGCCCA 62.723 63.158 5.56 0.00 0.00 5.36
55 56 2.819595 GAGATTCGCGCTGCCCAA 60.820 61.111 5.56 0.00 0.00 4.12
56 57 2.124570 AGATTCGCGCTGCCCAAT 60.125 55.556 5.56 0.00 0.00 3.16
57 58 2.110734 GAGATTCGCGCTGCCCAATC 62.111 60.000 5.56 4.37 0.00 2.67
58 59 3.512287 GATTCGCGCTGCCCAATCG 62.512 63.158 5.56 0.00 0.00 3.34
63 64 3.869272 CGCTGCCCAATCGTGCTC 61.869 66.667 0.00 0.00 0.00 4.26
64 65 3.869272 GCTGCCCAATCGTGCTCG 61.869 66.667 0.81 0.81 38.55 5.03
65 66 2.434884 CTGCCCAATCGTGCTCGT 60.435 61.111 8.17 0.00 38.33 4.18
66 67 2.434185 TGCCCAATCGTGCTCGTC 60.434 61.111 8.17 0.00 38.33 4.20
67 68 3.195698 GCCCAATCGTGCTCGTCC 61.196 66.667 8.17 0.00 38.33 4.79
68 69 2.264480 CCCAATCGTGCTCGTCCA 59.736 61.111 8.17 0.00 38.33 4.02
69 70 2.100631 CCCAATCGTGCTCGTCCAC 61.101 63.158 8.17 0.00 38.33 4.02
75 76 3.470567 GTGCTCGTCCACGCGAAG 61.471 66.667 15.93 4.40 40.57 3.79
88 89 2.269241 CGAAGCTTCCTCCCCACC 59.731 66.667 20.62 0.00 0.00 4.61
89 90 2.677848 GAAGCTTCCTCCCCACCC 59.322 66.667 15.97 0.00 0.00 4.61
90 91 2.941583 AAGCTTCCTCCCCACCCC 60.942 66.667 0.00 0.00 0.00 4.95
91 92 3.829311 AAGCTTCCTCCCCACCCCA 62.829 63.158 0.00 0.00 0.00 4.96
92 93 4.048470 GCTTCCTCCCCACCCCAC 62.048 72.222 0.00 0.00 0.00 4.61
93 94 3.339093 CTTCCTCCCCACCCCACC 61.339 72.222 0.00 0.00 0.00 4.61
94 95 3.882670 TTCCTCCCCACCCCACCT 61.883 66.667 0.00 0.00 0.00 4.00
95 96 3.883822 TTCCTCCCCACCCCACCTC 62.884 68.421 0.00 0.00 0.00 3.85
100 101 4.410400 CCCACCCCACCTCGCTTC 62.410 72.222 0.00 0.00 0.00 3.86
101 102 4.760047 CCACCCCACCTCGCTTCG 62.760 72.222 0.00 0.00 0.00 3.79
102 103 4.003788 CACCCCACCTCGCTTCGT 62.004 66.667 0.00 0.00 0.00 3.85
103 104 3.692406 ACCCCACCTCGCTTCGTC 61.692 66.667 0.00 0.00 0.00 4.20
104 105 4.796231 CCCCACCTCGCTTCGTCG 62.796 72.222 0.00 0.00 0.00 5.12
106 107 4.421479 CCACCTCGCTTCGTCGCT 62.421 66.667 0.00 0.00 0.00 4.93
107 108 2.483745 CACCTCGCTTCGTCGCTA 59.516 61.111 0.00 0.00 0.00 4.26
108 109 1.154093 CACCTCGCTTCGTCGCTAA 60.154 57.895 0.00 0.00 0.00 3.09
109 110 1.134530 CACCTCGCTTCGTCGCTAAG 61.135 60.000 0.00 0.00 0.00 2.18
110 111 1.303799 ACCTCGCTTCGTCGCTAAGA 61.304 55.000 0.00 0.00 0.00 2.10
111 112 0.179171 CCTCGCTTCGTCGCTAAGAA 60.179 55.000 0.00 0.00 0.00 2.52
112 113 1.614385 CTCGCTTCGTCGCTAAGAAA 58.386 50.000 0.00 0.00 0.00 2.52
113 114 1.579808 CTCGCTTCGTCGCTAAGAAAG 59.420 52.381 0.00 0.00 0.00 2.62
114 115 1.198408 TCGCTTCGTCGCTAAGAAAGA 59.802 47.619 0.00 0.00 0.00 2.52
115 116 1.983605 CGCTTCGTCGCTAAGAAAGAA 59.016 47.619 0.00 0.00 0.00 2.52
116 117 2.407361 CGCTTCGTCGCTAAGAAAGAAA 59.593 45.455 0.00 0.00 30.86 2.52
117 118 3.480505 CGCTTCGTCGCTAAGAAAGAAAG 60.481 47.826 0.00 0.00 30.86 2.62
118 119 3.673809 GCTTCGTCGCTAAGAAAGAAAGA 59.326 43.478 0.00 0.00 30.86 2.52
119 120 4.201542 GCTTCGTCGCTAAGAAAGAAAGAG 60.202 45.833 0.00 0.00 30.86 2.85
120 121 3.834610 TCGTCGCTAAGAAAGAAAGAGG 58.165 45.455 0.00 0.00 0.00 3.69
121 122 2.924290 CGTCGCTAAGAAAGAAAGAGGG 59.076 50.000 0.00 0.00 0.00 4.30
122 123 3.367087 CGTCGCTAAGAAAGAAAGAGGGA 60.367 47.826 0.00 0.00 0.00 4.20
123 124 4.177783 GTCGCTAAGAAAGAAAGAGGGAG 58.822 47.826 0.00 0.00 30.72 4.30
124 125 4.082136 GTCGCTAAGAAAGAAAGAGGGAGA 60.082 45.833 0.00 0.00 30.72 3.71
125 126 4.082136 TCGCTAAGAAAGAAAGAGGGAGAC 60.082 45.833 0.00 0.00 0.00 3.36
126 127 4.322049 CGCTAAGAAAGAAAGAGGGAGACA 60.322 45.833 0.00 0.00 0.00 3.41
127 128 5.552178 GCTAAGAAAGAAAGAGGGAGACAA 58.448 41.667 0.00 0.00 0.00 3.18
128 129 5.998363 GCTAAGAAAGAAAGAGGGAGACAAA 59.002 40.000 0.00 0.00 0.00 2.83
129 130 6.072948 GCTAAGAAAGAAAGAGGGAGACAAAC 60.073 42.308 0.00 0.00 0.00 2.93
130 131 5.373812 AGAAAGAAAGAGGGAGACAAACA 57.626 39.130 0.00 0.00 0.00 2.83
131 132 5.126779 AGAAAGAAAGAGGGAGACAAACAC 58.873 41.667 0.00 0.00 0.00 3.32
132 133 3.493767 AGAAAGAGGGAGACAAACACC 57.506 47.619 0.00 0.00 0.00 4.16
133 134 3.049344 AGAAAGAGGGAGACAAACACCT 58.951 45.455 0.00 0.00 35.67 4.00
135 136 3.938109 GAGGGAGACAAACACCTCC 57.062 57.895 0.00 0.00 46.29 4.30
136 137 1.353091 GAGGGAGACAAACACCTCCT 58.647 55.000 0.00 0.00 46.26 3.69
137 138 1.700186 GAGGGAGACAAACACCTCCTT 59.300 52.381 0.00 0.00 46.26 3.36
138 139 1.700186 AGGGAGACAAACACCTCCTTC 59.300 52.381 0.00 0.00 46.26 3.46
139 140 1.271434 GGGAGACAAACACCTCCTTCC 60.271 57.143 0.00 0.00 46.26 3.46
140 141 1.700186 GGAGACAAACACCTCCTTCCT 59.300 52.381 0.00 0.00 44.23 3.36
141 142 2.289756 GGAGACAAACACCTCCTTCCTC 60.290 54.545 0.00 0.00 44.23 3.71
142 143 1.344763 AGACAAACACCTCCTTCCTCG 59.655 52.381 0.00 0.00 0.00 4.63
143 144 1.343465 GACAAACACCTCCTTCCTCGA 59.657 52.381 0.00 0.00 0.00 4.04
389 401 4.393155 ACATCAAGCGCCGCCTCA 62.393 61.111 4.98 0.00 0.00 3.86
439 461 4.608774 AGGACCACCCCGTCGTGA 62.609 66.667 0.00 0.00 35.68 4.35
570 592 4.109675 CAATCCCCGCCGAACCCT 62.110 66.667 0.00 0.00 0.00 4.34
856 944 1.823295 ACGATGGCGGCATACTTCT 59.177 52.632 25.86 1.37 43.17 2.85
901 1006 1.905894 GGTGAGCTTCTCCTCCTCTTT 59.094 52.381 0.00 0.00 0.00 2.52
1427 1537 3.975035 GCAGTCTTTCGTCAAAATGGTTC 59.025 43.478 0.00 0.00 0.00 3.62
1434 1544 2.882137 TCGTCAAAATGGTTCAGTTCCC 59.118 45.455 0.00 0.00 0.00 3.97
1471 1581 3.769844 ACGGAGGTATGTGATTCAGTCTT 59.230 43.478 0.00 0.00 0.00 3.01
1606 1717 4.689612 ACAACTAAGCTCTCAGGTTTGA 57.310 40.909 4.32 0.00 37.16 2.69
1679 1790 4.256920 GTCATGCAGTCCTAACTTGACAT 58.743 43.478 6.45 0.00 39.21 3.06
1714 1825 9.300681 TTGAAATGTCAATAGATTCAAGGAACT 57.699 29.630 0.00 0.00 38.79 3.01
1717 1828 8.503458 AATGTCAATAGATTCAAGGAACTCTG 57.497 34.615 0.00 0.00 38.49 3.35
1723 1834 4.163427 AGATTCAAGGAACTCTGTCAGGA 58.837 43.478 0.00 0.00 38.49 3.86
1738 1849 7.836685 ACTCTGTCAGGAGTTATATGAAGAGAA 59.163 37.037 0.00 0.00 43.14 2.87
1786 1897 9.590451 AAACTCAATATGGTCAATGCTAATTTG 57.410 29.630 0.00 0.00 0.00 2.32
1824 1935 4.444056 CACTAAAATTTTGCTGGAACCACG 59.556 41.667 13.76 0.00 0.00 4.94
1901 2012 3.511146 TGCATCCTTTTGTCCTCCAAATC 59.489 43.478 0.00 0.00 42.45 2.17
1920 2031 6.294473 CAAATCATATAGGAGGCAGTCAAGT 58.706 40.000 0.00 0.00 0.00 3.16
1936 2047 6.364435 GCAGTCAAGTTTCATCTTCCAATTTC 59.636 38.462 0.00 0.00 0.00 2.17
1969 2080 3.492102 ACCTATTAGGATGCGTGCATT 57.508 42.857 16.80 0.00 37.67 3.56
2178 2289 5.271598 TGTTTTCCCCTGAAATAGCATGAT 58.728 37.500 0.00 0.00 40.08 2.45
2241 2352 6.727824 TGAATTTCAGCTCTACTTTGCTAC 57.272 37.500 0.00 0.00 37.81 3.58
2244 2355 6.976636 ATTTCAGCTCTACTTTGCTACTTC 57.023 37.500 0.00 0.00 37.81 3.01
2295 2406 1.603802 CCACATTGTTGAAGCACGAGT 59.396 47.619 0.00 0.00 0.00 4.18
2328 2439 4.079446 CACCGGTTGAGTGGCAAT 57.921 55.556 2.97 0.00 39.03 3.56
2380 2491 2.533266 AATGGCGGTGCTACTATGAG 57.467 50.000 0.00 0.00 0.00 2.90
2386 2497 1.338337 CGGTGCTACTATGAGGTCAGG 59.662 57.143 0.00 0.00 0.00 3.86
2397 2508 2.706890 TGAGGTCAGGTTATTTTCCGC 58.293 47.619 0.00 0.00 0.00 5.54
2398 2509 2.304761 TGAGGTCAGGTTATTTTCCGCT 59.695 45.455 0.00 0.00 0.00 5.52
2399 2510 3.244770 TGAGGTCAGGTTATTTTCCGCTT 60.245 43.478 0.00 0.00 0.00 4.68
2400 2511 3.756963 GAGGTCAGGTTATTTTCCGCTTT 59.243 43.478 0.00 0.00 0.00 3.51
2401 2512 3.756963 AGGTCAGGTTATTTTCCGCTTTC 59.243 43.478 0.00 0.00 0.00 2.62
2402 2513 3.504520 GGTCAGGTTATTTTCCGCTTTCA 59.495 43.478 0.00 0.00 0.00 2.69
2403 2514 4.157840 GGTCAGGTTATTTTCCGCTTTCAT 59.842 41.667 0.00 0.00 0.00 2.57
2404 2515 5.332707 GTCAGGTTATTTTCCGCTTTCATC 58.667 41.667 0.00 0.00 0.00 2.92
2405 2516 5.007034 TCAGGTTATTTTCCGCTTTCATCA 58.993 37.500 0.00 0.00 0.00 3.07
2406 2517 5.475220 TCAGGTTATTTTCCGCTTTCATCAA 59.525 36.000 0.00 0.00 0.00 2.57
2407 2518 5.801947 CAGGTTATTTTCCGCTTTCATCAAG 59.198 40.000 0.00 0.00 35.29 3.02
2408 2519 5.710099 AGGTTATTTTCCGCTTTCATCAAGA 59.290 36.000 0.00 0.00 33.80 3.02
2409 2520 6.378280 AGGTTATTTTCCGCTTTCATCAAGAT 59.622 34.615 0.00 0.00 33.80 2.40
2410 2521 6.473455 GGTTATTTTCCGCTTTCATCAAGATG 59.527 38.462 3.67 3.67 40.09 2.90
2411 2522 5.902613 ATTTTCCGCTTTCATCAAGATGA 57.097 34.783 8.61 8.61 45.30 2.92
2422 2533 5.852282 TCATCAAGATGAGGATAACGTGA 57.148 39.130 8.61 0.00 42.42 4.35
2423 2534 5.592054 TCATCAAGATGAGGATAACGTGAC 58.408 41.667 8.61 0.00 42.42 3.67
2424 2535 5.360999 TCATCAAGATGAGGATAACGTGACT 59.639 40.000 8.61 0.00 42.42 3.41
2425 2536 4.998788 TCAAGATGAGGATAACGTGACTG 58.001 43.478 0.00 0.00 0.00 3.51
2426 2537 4.462834 TCAAGATGAGGATAACGTGACTGT 59.537 41.667 0.00 0.00 0.00 3.55
2427 2538 5.047306 TCAAGATGAGGATAACGTGACTGTT 60.047 40.000 0.00 0.00 35.86 3.16
2428 2539 5.407407 AGATGAGGATAACGTGACTGTTT 57.593 39.130 0.00 0.00 33.32 2.83
2429 2540 5.171476 AGATGAGGATAACGTGACTGTTTG 58.829 41.667 0.00 0.00 33.32 2.93
2430 2541 4.330944 TGAGGATAACGTGACTGTTTGT 57.669 40.909 0.00 0.00 33.32 2.83
2431 2542 4.055360 TGAGGATAACGTGACTGTTTGTG 58.945 43.478 0.00 0.00 33.32 3.33
2432 2543 4.056050 GAGGATAACGTGACTGTTTGTGT 58.944 43.478 0.00 0.00 33.32 3.72
2433 2544 3.807622 AGGATAACGTGACTGTTTGTGTG 59.192 43.478 0.00 0.00 33.32 3.82
2434 2545 3.541711 GATAACGTGACTGTTTGTGTGC 58.458 45.455 0.00 0.00 33.32 4.57
2435 2546 0.096281 AACGTGACTGTTTGTGTGCG 59.904 50.000 0.00 0.00 0.00 5.34
2436 2547 1.017177 ACGTGACTGTTTGTGTGCGT 61.017 50.000 0.00 0.00 0.00 5.24
2437 2548 0.586256 CGTGACTGTTTGTGTGCGTG 60.586 55.000 0.00 0.00 0.00 5.34
2438 2549 0.861450 GTGACTGTTTGTGTGCGTGC 60.861 55.000 0.00 0.00 0.00 5.34
2439 2550 1.298339 GACTGTTTGTGTGCGTGCC 60.298 57.895 0.00 0.00 0.00 5.01
2440 2551 1.714899 GACTGTTTGTGTGCGTGCCT 61.715 55.000 0.00 0.00 0.00 4.75
2441 2552 1.298563 CTGTTTGTGTGCGTGCCTG 60.299 57.895 0.00 0.00 0.00 4.85
2442 2553 2.026014 GTTTGTGTGCGTGCCTGG 59.974 61.111 0.00 0.00 0.00 4.45
2443 2554 2.439338 TTTGTGTGCGTGCCTGGT 60.439 55.556 0.00 0.00 0.00 4.00
2444 2555 2.049185 TTTGTGTGCGTGCCTGGTT 61.049 52.632 0.00 0.00 0.00 3.67
2445 2556 2.276863 TTTGTGTGCGTGCCTGGTTG 62.277 55.000 0.00 0.00 0.00 3.77
2446 2557 4.629115 GTGTGCGTGCCTGGTTGC 62.629 66.667 0.00 0.00 0.00 4.17
2452 2563 4.329545 GTGCCTGGTTGCCGGAGA 62.330 66.667 5.05 0.00 29.82 3.71
2453 2564 4.329545 TGCCTGGTTGCCGGAGAC 62.330 66.667 5.05 1.49 29.82 3.36
2472 2583 7.861176 GGAGACGTTAAATTAGCTAGATCTG 57.139 40.000 5.18 0.00 0.00 2.90
2473 2584 6.363896 GGAGACGTTAAATTAGCTAGATCTGC 59.636 42.308 5.18 7.25 0.00 4.26
2474 2585 6.217294 AGACGTTAAATTAGCTAGATCTGCC 58.783 40.000 5.18 0.00 0.00 4.85
2475 2586 5.914033 ACGTTAAATTAGCTAGATCTGCCA 58.086 37.500 5.18 0.00 0.00 4.92
2476 2587 6.525629 ACGTTAAATTAGCTAGATCTGCCAT 58.474 36.000 5.18 0.28 0.00 4.40
2477 2588 6.425114 ACGTTAAATTAGCTAGATCTGCCATG 59.575 38.462 5.18 0.00 0.00 3.66
2478 2589 6.425114 CGTTAAATTAGCTAGATCTGCCATGT 59.575 38.462 5.18 1.16 0.00 3.21
2479 2590 7.570140 CGTTAAATTAGCTAGATCTGCCATGTG 60.570 40.741 5.18 0.00 0.00 3.21
2480 2591 4.970860 ATTAGCTAGATCTGCCATGTGT 57.029 40.909 5.18 0.00 0.00 3.72
2481 2592 2.616634 AGCTAGATCTGCCATGTGTG 57.383 50.000 5.18 0.00 0.00 3.82
2482 2593 1.836166 AGCTAGATCTGCCATGTGTGT 59.164 47.619 5.18 0.00 0.00 3.72
2483 2594 2.238144 AGCTAGATCTGCCATGTGTGTT 59.762 45.455 5.18 0.00 0.00 3.32
2484 2595 3.012518 GCTAGATCTGCCATGTGTGTTT 58.987 45.455 5.18 0.00 0.00 2.83
2485 2596 3.181503 GCTAGATCTGCCATGTGTGTTTG 60.182 47.826 5.18 0.00 0.00 2.93
2486 2597 1.542915 AGATCTGCCATGTGTGTTTGC 59.457 47.619 0.00 0.00 0.00 3.68
2487 2598 0.604578 ATCTGCCATGTGTGTTTGCC 59.395 50.000 0.00 0.00 0.00 4.52
2488 2599 1.372004 CTGCCATGTGTGTTTGCCG 60.372 57.895 0.00 0.00 0.00 5.69
2489 2600 2.049248 GCCATGTGTGTTTGCCGG 60.049 61.111 0.00 0.00 0.00 6.13
2490 2601 2.560119 GCCATGTGTGTTTGCCGGA 61.560 57.895 5.05 0.00 0.00 5.14
2491 2602 1.580942 CCATGTGTGTTTGCCGGAG 59.419 57.895 5.05 0.00 0.00 4.63
2492 2603 0.888736 CCATGTGTGTTTGCCGGAGA 60.889 55.000 5.05 0.00 0.00 3.71
2493 2604 1.167851 CATGTGTGTTTGCCGGAGAT 58.832 50.000 5.05 0.00 0.00 2.75
2494 2605 1.135603 CATGTGTGTTTGCCGGAGATG 60.136 52.381 5.05 0.00 0.00 2.90
2495 2606 0.179032 TGTGTGTTTGCCGGAGATGT 60.179 50.000 5.05 0.00 0.00 3.06
2496 2607 0.951558 GTGTGTTTGCCGGAGATGTT 59.048 50.000 5.05 0.00 0.00 2.71
2497 2608 2.147958 GTGTGTTTGCCGGAGATGTTA 58.852 47.619 5.05 0.00 0.00 2.41
2498 2609 2.550606 GTGTGTTTGCCGGAGATGTTAA 59.449 45.455 5.05 0.00 0.00 2.01
2499 2610 3.190535 GTGTGTTTGCCGGAGATGTTAAT 59.809 43.478 5.05 0.00 0.00 1.40
2500 2611 3.438781 TGTGTTTGCCGGAGATGTTAATC 59.561 43.478 5.05 0.00 0.00 1.75
2501 2612 3.438781 GTGTTTGCCGGAGATGTTAATCA 59.561 43.478 5.05 0.00 35.03 2.57
2502 2613 3.689161 TGTTTGCCGGAGATGTTAATCAG 59.311 43.478 5.05 0.00 35.03 2.90
2503 2614 1.953559 TGCCGGAGATGTTAATCAGC 58.046 50.000 5.05 0.00 35.03 4.26
2504 2615 1.486310 TGCCGGAGATGTTAATCAGCT 59.514 47.619 5.05 0.00 46.06 4.24
2505 2616 2.698274 TGCCGGAGATGTTAATCAGCTA 59.302 45.455 5.05 0.00 43.25 3.32
2506 2617 3.243873 TGCCGGAGATGTTAATCAGCTAG 60.244 47.826 5.05 0.00 43.25 3.42
2507 2618 3.005897 GCCGGAGATGTTAATCAGCTAGA 59.994 47.826 5.05 0.00 43.25 2.43
2508 2619 4.322349 GCCGGAGATGTTAATCAGCTAGAT 60.322 45.833 5.05 0.00 43.25 1.98
2509 2620 5.406649 CCGGAGATGTTAATCAGCTAGATC 58.593 45.833 0.00 0.00 43.25 2.75
2510 2621 5.184864 CCGGAGATGTTAATCAGCTAGATCT 59.815 44.000 0.00 0.00 43.25 2.75
2511 2622 6.092092 CGGAGATGTTAATCAGCTAGATCTG 58.908 44.000 5.18 0.00 43.25 2.90
2512 2623 5.868801 GGAGATGTTAATCAGCTAGATCTGC 59.131 44.000 5.18 7.25 43.25 4.26
2513 2624 5.792741 AGATGTTAATCAGCTAGATCTGCC 58.207 41.667 5.18 0.00 41.29 4.85
2514 2625 5.543405 AGATGTTAATCAGCTAGATCTGCCT 59.457 40.000 5.18 0.00 41.29 4.75
2515 2626 5.620738 TGTTAATCAGCTAGATCTGCCTT 57.379 39.130 5.18 4.48 35.39 4.35
2516 2627 5.363101 TGTTAATCAGCTAGATCTGCCTTG 58.637 41.667 5.18 3.22 35.39 3.61
2517 2628 5.104776 TGTTAATCAGCTAGATCTGCCTTGT 60.105 40.000 5.18 0.00 35.39 3.16
2518 2629 2.975732 TCAGCTAGATCTGCCTTGTG 57.024 50.000 5.18 2.23 34.19 3.33
2519 2630 2.460669 TCAGCTAGATCTGCCTTGTGA 58.539 47.619 5.18 4.45 34.19 3.58
2520 2631 2.833943 TCAGCTAGATCTGCCTTGTGAA 59.166 45.455 5.18 0.00 34.19 3.18
2521 2632 2.935201 CAGCTAGATCTGCCTTGTGAAC 59.065 50.000 5.18 0.00 0.00 3.18
2522 2633 2.836981 AGCTAGATCTGCCTTGTGAACT 59.163 45.455 5.18 0.00 0.00 3.01
2523 2634 2.935201 GCTAGATCTGCCTTGTGAACTG 59.065 50.000 5.18 0.00 0.00 3.16
2524 2635 2.486472 AGATCTGCCTTGTGAACTGG 57.514 50.000 0.00 0.00 0.00 4.00
2525 2636 1.004044 AGATCTGCCTTGTGAACTGGG 59.996 52.381 0.00 0.00 0.00 4.45
2526 2637 0.038744 ATCTGCCTTGTGAACTGGGG 59.961 55.000 0.00 0.00 0.00 4.96
2527 2638 2.203480 TGCCTTGTGAACTGGGGC 60.203 61.111 0.00 0.00 42.73 5.80
2528 2639 2.203480 GCCTTGTGAACTGGGGCA 60.203 61.111 0.00 0.00 42.08 5.36
2529 2640 2.270986 GCCTTGTGAACTGGGGCAG 61.271 63.158 0.00 0.00 42.08 4.85
2530 2641 1.455849 CCTTGTGAACTGGGGCAGA 59.544 57.895 0.00 0.00 35.18 4.26
2531 2642 0.607489 CCTTGTGAACTGGGGCAGAG 60.607 60.000 0.00 0.00 35.18 3.35
2532 2643 0.607489 CTTGTGAACTGGGGCAGAGG 60.607 60.000 0.00 0.00 35.18 3.69
2533 2644 2.360475 GTGAACTGGGGCAGAGGC 60.360 66.667 0.00 0.00 35.18 4.70
2534 2645 2.853542 TGAACTGGGGCAGAGGCA 60.854 61.111 0.00 0.00 43.71 4.75
2535 2646 2.045536 GAACTGGGGCAGAGGCAG 60.046 66.667 0.00 0.00 43.71 4.85
2536 2647 4.357279 AACTGGGGCAGAGGCAGC 62.357 66.667 0.00 0.00 43.71 5.25
2538 2649 4.044439 CTGGGGCAGAGGCAGCTT 62.044 66.667 0.00 0.00 43.71 3.74
2539 2650 3.580604 CTGGGGCAGAGGCAGCTTT 62.581 63.158 0.00 0.00 43.71 3.51
2540 2651 2.202236 CTGGGGCAGAGGCAGCTTTA 62.202 60.000 0.00 0.00 43.71 1.85
2541 2652 1.000896 GGGGCAGAGGCAGCTTTAA 60.001 57.895 0.00 0.00 43.71 1.52
2542 2653 0.396278 GGGGCAGAGGCAGCTTTAAT 60.396 55.000 0.00 0.00 43.71 1.40
2543 2654 1.478631 GGGCAGAGGCAGCTTTAATT 58.521 50.000 0.00 0.00 43.71 1.40
2544 2655 2.654863 GGGCAGAGGCAGCTTTAATTA 58.345 47.619 0.00 0.00 43.71 1.40
2545 2656 2.620585 GGGCAGAGGCAGCTTTAATTAG 59.379 50.000 0.00 0.00 43.71 1.73
2546 2657 2.620585 GGCAGAGGCAGCTTTAATTAGG 59.379 50.000 0.00 0.00 43.71 2.69
2547 2658 2.033927 GCAGAGGCAGCTTTAATTAGGC 59.966 50.000 0.00 4.88 40.72 3.93
2548 2659 2.620585 CAGAGGCAGCTTTAATTAGGCC 59.379 50.000 0.00 0.00 41.65 5.19
2554 2665 6.685527 GGCAGCTTTAATTAGGCCTATATC 57.314 41.667 14.74 0.00 38.37 1.63
2555 2666 5.590663 GGCAGCTTTAATTAGGCCTATATCC 59.409 44.000 14.74 2.11 38.37 2.59
2556 2667 6.180472 GCAGCTTTAATTAGGCCTATATCCA 58.820 40.000 14.74 0.00 0.00 3.41
2557 2668 6.659242 GCAGCTTTAATTAGGCCTATATCCAA 59.341 38.462 14.74 0.00 0.00 3.53
2558 2669 7.176690 GCAGCTTTAATTAGGCCTATATCCAAA 59.823 37.037 14.74 8.93 0.00 3.28
2559 2670 9.247861 CAGCTTTAATTAGGCCTATATCCAAAT 57.752 33.333 14.74 0.35 0.00 2.32
2560 2671 9.467796 AGCTTTAATTAGGCCTATATCCAAATC 57.532 33.333 14.74 6.05 0.00 2.17
2561 2672 9.243105 GCTTTAATTAGGCCTATATCCAAATCA 57.757 33.333 14.74 0.00 0.00 2.57
2563 2674 8.786826 TTAATTAGGCCTATATCCAAATCACG 57.213 34.615 14.74 0.00 0.00 4.35
2564 2675 3.059352 AGGCCTATATCCAAATCACGC 57.941 47.619 1.29 0.00 0.00 5.34
2565 2676 2.371841 AGGCCTATATCCAAATCACGCA 59.628 45.455 1.29 0.00 0.00 5.24
2566 2677 3.009473 AGGCCTATATCCAAATCACGCAT 59.991 43.478 1.29 0.00 0.00 4.73
2567 2678 3.127548 GGCCTATATCCAAATCACGCATG 59.872 47.826 0.00 0.00 0.00 4.06
2568 2679 3.426695 GCCTATATCCAAATCACGCATGC 60.427 47.826 7.91 7.91 0.00 4.06
2569 2680 3.752747 CCTATATCCAAATCACGCATGCA 59.247 43.478 19.57 0.00 0.00 3.96
2570 2681 4.397103 CCTATATCCAAATCACGCATGCAT 59.603 41.667 19.57 0.00 0.00 3.96
2571 2682 2.502213 ATCCAAATCACGCATGCATG 57.498 45.000 22.70 22.70 0.00 4.06
2585 2696 3.897325 CATGCATGCATGTTGTATCTCC 58.103 45.455 40.30 8.24 46.20 3.71
2586 2697 3.286329 TGCATGCATGTTGTATCTCCT 57.714 42.857 26.79 0.00 0.00 3.69
2587 2698 4.420522 TGCATGCATGTTGTATCTCCTA 57.579 40.909 26.79 0.00 0.00 2.94
2588 2699 4.976864 TGCATGCATGTTGTATCTCCTAT 58.023 39.130 26.79 0.00 0.00 2.57
2589 2700 6.112927 TGCATGCATGTTGTATCTCCTATA 57.887 37.500 26.79 0.00 0.00 1.31
2590 2701 6.532826 TGCATGCATGTTGTATCTCCTATAA 58.467 36.000 26.79 0.00 0.00 0.98
2591 2702 6.997476 TGCATGCATGTTGTATCTCCTATAAA 59.003 34.615 26.79 0.00 0.00 1.40
2592 2703 7.041167 TGCATGCATGTTGTATCTCCTATAAAC 60.041 37.037 26.79 5.09 0.00 2.01
2593 2704 7.173907 GCATGCATGTTGTATCTCCTATAAACT 59.826 37.037 26.79 0.00 0.00 2.66
2594 2705 9.060347 CATGCATGTTGTATCTCCTATAAACTT 57.940 33.333 18.91 0.00 0.00 2.66
2595 2706 9.632638 ATGCATGTTGTATCTCCTATAAACTTT 57.367 29.630 0.00 0.00 0.00 2.66
2596 2707 9.461312 TGCATGTTGTATCTCCTATAAACTTTT 57.539 29.630 0.00 0.00 0.00 2.27
2632 2743 7.482169 AGATAAGGTCTCTGTGTTATGTTCA 57.518 36.000 0.00 0.00 28.45 3.18
2633 2744 7.907389 AGATAAGGTCTCTGTGTTATGTTCAA 58.093 34.615 0.00 0.00 28.45 2.69
2634 2745 8.037758 AGATAAGGTCTCTGTGTTATGTTCAAG 58.962 37.037 0.00 0.00 28.45 3.02
2635 2746 5.552870 AGGTCTCTGTGTTATGTTCAAGT 57.447 39.130 0.00 0.00 0.00 3.16
2636 2747 5.930135 AGGTCTCTGTGTTATGTTCAAGTT 58.070 37.500 0.00 0.00 0.00 2.66
2637 2748 5.992217 AGGTCTCTGTGTTATGTTCAAGTTC 59.008 40.000 0.00 0.00 0.00 3.01
2638 2749 5.992217 GGTCTCTGTGTTATGTTCAAGTTCT 59.008 40.000 0.00 0.00 0.00 3.01
2639 2750 6.073548 GGTCTCTGTGTTATGTTCAAGTTCTG 60.074 42.308 0.00 0.00 0.00 3.02
2640 2751 6.480320 GTCTCTGTGTTATGTTCAAGTTCTGT 59.520 38.462 0.00 0.00 0.00 3.41
2641 2752 7.652105 GTCTCTGTGTTATGTTCAAGTTCTGTA 59.348 37.037 0.00 0.00 0.00 2.74
2642 2753 8.201464 TCTCTGTGTTATGTTCAAGTTCTGTAA 58.799 33.333 0.00 0.00 0.00 2.41
2643 2754 8.365399 TCTGTGTTATGTTCAAGTTCTGTAAG 57.635 34.615 0.00 0.00 0.00 2.34
2644 2755 8.201464 TCTGTGTTATGTTCAAGTTCTGTAAGA 58.799 33.333 0.00 0.00 44.68 2.10
2688 2799 3.807622 TGGTTCGTGAACTCTTTGTGATC 59.192 43.478 12.10 0.00 40.94 2.92
2697 2808 4.640789 ACTCTTTGTGATCGCTAGGTAG 57.359 45.455 7.94 3.46 0.00 3.18
2700 2811 3.380637 TCTTTGTGATCGCTAGGTAGACC 59.619 47.826 7.94 0.00 0.00 3.85
2710 2821 3.484407 GCTAGGTAGACCTTATCCGTCA 58.516 50.000 6.52 0.00 46.09 4.35
2727 2838 4.050553 CCGTCAGTGTTGCATTCAAATTT 58.949 39.130 0.00 0.00 33.37 1.82
2785 2896 8.424274 AAACCATTTCAGTCAGATTTTGAAAC 57.576 30.769 8.87 0.00 41.85 2.78
2802 2913 4.975631 TGAAACGATTCCCTGTAAAAGGA 58.024 39.130 2.72 0.00 46.98 3.36
2803 2914 5.566469 TGAAACGATTCCCTGTAAAAGGAT 58.434 37.500 2.72 0.00 46.98 3.24
2804 2915 5.646360 TGAAACGATTCCCTGTAAAAGGATC 59.354 40.000 2.72 0.00 46.98 3.36
2878 2989 2.043604 TAGGGAGCATGCACCATCCG 62.044 60.000 31.35 0.00 32.30 4.18
2918 3029 8.580720 TGAAATAGACTCTATTGGATCTGCTAC 58.419 37.037 11.38 0.00 0.00 3.58
2919 3030 6.751514 ATAGACTCTATTGGATCTGCTACG 57.248 41.667 0.00 0.00 0.00 3.51
2928 3039 1.957177 GGATCTGCTACGATGGAGTCA 59.043 52.381 0.00 0.00 0.00 3.41
2949 3060 1.139058 GGATCTGGCAACGGTGATAGT 59.861 52.381 3.55 0.00 45.94 2.12
2958 3069 3.659786 CAACGGTGATAGTGAGGTTCAA 58.340 45.455 0.00 0.00 0.00 2.69
2971 3082 5.184479 AGTGAGGTTCAACGTACTATGCTTA 59.816 40.000 0.00 0.00 0.00 3.09
2993 3104 2.555757 AGCTTCTGAACCAACTTGATGC 59.444 45.455 0.00 0.00 0.00 3.91
3033 3144 6.866248 ACAAAATTAAGGTTCTTATGGCAACG 59.134 34.615 0.00 0.00 42.51 4.10
3054 3165 7.063544 GCAACGAATAGGATAGACATATTGGAC 59.936 40.741 0.00 0.00 35.93 4.02
3125 3236 6.238842 CCAAATCCTAATGCAGATGTAAGTGG 60.239 42.308 0.00 0.00 0.00 4.00
3177 3292 4.124970 TGCTTGCTCATATCAGTGCTAAG 58.875 43.478 0.00 0.00 0.00 2.18
3207 3322 6.785337 TTATCTATTCTTTCAGTCCCGTGA 57.215 37.500 0.00 0.00 0.00 4.35
3249 3364 3.440173 TCGAGGAAAATGAACTTGATGCC 59.560 43.478 0.00 0.00 0.00 4.40
3322 3437 6.653989 AGCAGAGCTAAAGGTATGTATTGTT 58.346 36.000 5.78 0.00 36.99 2.83
3340 3456 4.811555 TGTTGCCATTATAACGAGCATC 57.188 40.909 6.70 6.90 32.67 3.91
3342 3458 5.606505 TGTTGCCATTATAACGAGCATCTA 58.393 37.500 6.70 0.00 32.67 1.98
3345 3461 7.066404 TGTTGCCATTATAACGAGCATCTAAAA 59.934 33.333 6.70 0.00 32.67 1.52
3427 3548 1.119684 ACCATGTAGGCGAGCACATA 58.880 50.000 0.00 0.00 43.14 2.29
3461 3584 8.319881 ACATCTATAATCTGCTGCATAATGTCT 58.680 33.333 1.31 0.00 0.00 3.41
3463 3586 7.326454 TCTATAATCTGCTGCATAATGTCTCC 58.674 38.462 1.31 0.00 0.00 3.71
3468 3591 4.056740 CTGCTGCATAATGTCTCCTGTAG 58.943 47.826 1.31 0.00 0.00 2.74
3472 3595 4.697514 TGCATAATGTCTCCTGTAGCTTC 58.302 43.478 0.00 0.00 0.00 3.86
3475 3598 5.452496 GCATAATGTCTCCTGTAGCTTCTGA 60.452 44.000 0.00 0.00 0.00 3.27
3492 3615 1.005215 CTGAAGAAATCCAGGCCCAGT 59.995 52.381 0.00 0.00 0.00 4.00
3494 3617 1.821136 GAAGAAATCCAGGCCCAGTTG 59.179 52.381 0.00 0.00 0.00 3.16
3517 3641 5.879223 TGCCATTTTTACCCATGCTAAAATG 59.121 36.000 17.06 17.06 42.94 2.32
3522 3646 9.979578 CATTTTTACCCATGCTAAAATGCTATA 57.020 29.630 14.26 1.13 39.58 1.31
3530 3654 7.365741 CCATGCTAAAATGCTATAAACTCAGG 58.634 38.462 0.00 0.00 0.00 3.86
3531 3655 6.377327 TGCTAAAATGCTATAAACTCAGGC 57.623 37.500 0.00 0.00 0.00 4.85
3532 3656 5.299279 TGCTAAAATGCTATAAACTCAGGCC 59.701 40.000 0.00 0.00 0.00 5.19
3533 3657 5.278512 GCTAAAATGCTATAAACTCAGGCCC 60.279 44.000 0.00 0.00 0.00 5.80
3534 3658 3.951563 AATGCTATAAACTCAGGCCCA 57.048 42.857 0.00 0.00 0.00 5.36
3535 3659 3.498774 ATGCTATAAACTCAGGCCCAG 57.501 47.619 0.00 0.00 0.00 4.45
3536 3660 2.196595 TGCTATAAACTCAGGCCCAGT 58.803 47.619 0.00 0.00 0.00 4.00
3537 3661 2.576191 TGCTATAAACTCAGGCCCAGTT 59.424 45.455 11.24 11.24 35.51 3.16
3538 3662 2.945668 GCTATAAACTCAGGCCCAGTTG 59.054 50.000 16.61 7.05 34.21 3.16
3539 3663 1.839424 ATAAACTCAGGCCCAGTTGC 58.161 50.000 16.61 0.00 34.21 4.17
3564 3688 3.764237 AAAAAGACCTTCTAGACGCCA 57.236 42.857 0.00 0.00 0.00 5.69
3565 3689 3.764237 AAAAGACCTTCTAGACGCCAA 57.236 42.857 0.00 0.00 0.00 4.52
3566 3690 2.745515 AAGACCTTCTAGACGCCAAC 57.254 50.000 0.00 0.00 0.00 3.77
3567 3691 1.629043 AGACCTTCTAGACGCCAACA 58.371 50.000 0.00 0.00 0.00 3.33
3568 3692 1.546476 AGACCTTCTAGACGCCAACAG 59.454 52.381 0.00 0.00 0.00 3.16
3569 3693 0.037232 ACCTTCTAGACGCCAACAGC 60.037 55.000 0.00 0.00 38.52 4.40
3570 3694 0.037326 CCTTCTAGACGCCAACAGCA 60.037 55.000 0.00 0.00 44.04 4.41
3571 3695 1.608025 CCTTCTAGACGCCAACAGCAA 60.608 52.381 0.00 0.00 44.04 3.91
3572 3696 1.461127 CTTCTAGACGCCAACAGCAAC 59.539 52.381 0.00 0.00 44.04 4.17
3573 3697 0.391228 TCTAGACGCCAACAGCAACA 59.609 50.000 0.00 0.00 44.04 3.33
3574 3698 1.202592 TCTAGACGCCAACAGCAACAA 60.203 47.619 0.00 0.00 44.04 2.83
3575 3699 1.195448 CTAGACGCCAACAGCAACAAG 59.805 52.381 0.00 0.00 44.04 3.16
3576 3700 0.463654 AGACGCCAACAGCAACAAGA 60.464 50.000 0.00 0.00 44.04 3.02
3577 3701 0.380378 GACGCCAACAGCAACAAGAA 59.620 50.000 0.00 0.00 44.04 2.52
3578 3702 1.001378 GACGCCAACAGCAACAAGAAT 60.001 47.619 0.00 0.00 44.04 2.40
3579 3703 1.408702 ACGCCAACAGCAACAAGAATT 59.591 42.857 0.00 0.00 44.04 2.17
3580 3704 2.159114 ACGCCAACAGCAACAAGAATTT 60.159 40.909 0.00 0.00 44.04 1.82
3581 3705 3.067461 ACGCCAACAGCAACAAGAATTTA 59.933 39.130 0.00 0.00 44.04 1.40
3582 3706 3.425193 CGCCAACAGCAACAAGAATTTAC 59.575 43.478 0.00 0.00 44.04 2.01
3583 3707 3.740832 GCCAACAGCAACAAGAATTTACC 59.259 43.478 0.00 0.00 42.97 2.85
3584 3708 4.306600 CCAACAGCAACAAGAATTTACCC 58.693 43.478 0.00 0.00 0.00 3.69
3585 3709 4.202202 CCAACAGCAACAAGAATTTACCCA 60.202 41.667 0.00 0.00 0.00 4.51
3586 3710 5.511202 CCAACAGCAACAAGAATTTACCCAT 60.511 40.000 0.00 0.00 0.00 4.00
3587 3711 6.295011 CCAACAGCAACAAGAATTTACCCATA 60.295 38.462 0.00 0.00 0.00 2.74
3588 3712 7.322664 CAACAGCAACAAGAATTTACCCATAT 58.677 34.615 0.00 0.00 0.00 1.78
3589 3713 6.866480 ACAGCAACAAGAATTTACCCATATG 58.134 36.000 0.00 0.00 0.00 1.78
3590 3714 6.437162 ACAGCAACAAGAATTTACCCATATGT 59.563 34.615 1.24 0.00 0.00 2.29
3591 3715 6.974622 CAGCAACAAGAATTTACCCATATGTC 59.025 38.462 1.24 0.00 0.00 3.06
3592 3716 6.891908 AGCAACAAGAATTTACCCATATGTCT 59.108 34.615 1.24 0.00 0.00 3.41
3593 3717 6.974622 GCAACAAGAATTTACCCATATGTCTG 59.025 38.462 1.24 0.00 0.00 3.51
3594 3718 7.362920 GCAACAAGAATTTACCCATATGTCTGT 60.363 37.037 1.24 0.00 0.00 3.41
3595 3719 8.522830 CAACAAGAATTTACCCATATGTCTGTT 58.477 33.333 1.24 1.95 0.00 3.16
3596 3720 8.055279 ACAAGAATTTACCCATATGTCTGTTG 57.945 34.615 1.24 0.00 0.00 3.33
3597 3721 7.122650 ACAAGAATTTACCCATATGTCTGTTGG 59.877 37.037 1.24 0.00 0.00 3.77
3598 3722 6.731467 AGAATTTACCCATATGTCTGTTGGT 58.269 36.000 1.24 3.29 0.00 3.67
3599 3723 7.182060 AGAATTTACCCATATGTCTGTTGGTT 58.818 34.615 1.24 0.00 0.00 3.67
3600 3724 8.333235 AGAATTTACCCATATGTCTGTTGGTTA 58.667 33.333 1.24 0.00 0.00 2.85
3601 3725 9.131791 GAATTTACCCATATGTCTGTTGGTTAT 57.868 33.333 1.24 0.00 0.00 1.89
3602 3726 9.487442 AATTTACCCATATGTCTGTTGGTTATT 57.513 29.630 1.24 2.50 0.00 1.40
3603 3727 7.873719 TTACCCATATGTCTGTTGGTTATTG 57.126 36.000 1.24 0.00 0.00 1.90
3604 3728 5.826643 ACCCATATGTCTGTTGGTTATTGT 58.173 37.500 1.24 0.00 0.00 2.71
3605 3729 6.252995 ACCCATATGTCTGTTGGTTATTGTT 58.747 36.000 1.24 0.00 0.00 2.83
3606 3730 6.152661 ACCCATATGTCTGTTGGTTATTGTTG 59.847 38.462 1.24 0.00 0.00 3.33
3607 3731 6.405731 CCCATATGTCTGTTGGTTATTGTTGG 60.406 42.308 1.24 0.00 0.00 3.77
3608 3732 6.152661 CCATATGTCTGTTGGTTATTGTTGGT 59.847 38.462 1.24 0.00 0.00 3.67
3609 3733 7.309744 CCATATGTCTGTTGGTTATTGTTGGTT 60.310 37.037 1.24 0.00 0.00 3.67
3610 3734 5.923733 TGTCTGTTGGTTATTGTTGGTTT 57.076 34.783 0.00 0.00 0.00 3.27
3611 3735 7.589958 ATGTCTGTTGGTTATTGTTGGTTTA 57.410 32.000 0.00 0.00 0.00 2.01
3612 3736 7.589958 TGTCTGTTGGTTATTGTTGGTTTAT 57.410 32.000 0.00 0.00 0.00 1.40
3613 3737 8.012957 TGTCTGTTGGTTATTGTTGGTTTATT 57.987 30.769 0.00 0.00 0.00 1.40
3614 3738 8.478877 TGTCTGTTGGTTATTGTTGGTTTATTT 58.521 29.630 0.00 0.00 0.00 1.40
3615 3739 9.320352 GTCTGTTGGTTATTGTTGGTTTATTTT 57.680 29.630 0.00 0.00 0.00 1.82
3616 3740 9.319143 TCTGTTGGTTATTGTTGGTTTATTTTG 57.681 29.630 0.00 0.00 0.00 2.44
3617 3741 9.103861 CTGTTGGTTATTGTTGGTTTATTTTGT 57.896 29.630 0.00 0.00 0.00 2.83
3618 3742 9.449719 TGTTGGTTATTGTTGGTTTATTTTGTT 57.550 25.926 0.00 0.00 0.00 2.83
3619 3743 9.709600 GTTGGTTATTGTTGGTTTATTTTGTTG 57.290 29.630 0.00 0.00 0.00 3.33
3620 3744 9.449719 TTGGTTATTGTTGGTTTATTTTGTTGT 57.550 25.926 0.00 0.00 0.00 3.32
3621 3745 9.449719 TGGTTATTGTTGGTTTATTTTGTTGTT 57.550 25.926 0.00 0.00 0.00 2.83
3622 3746 9.923786 GGTTATTGTTGGTTTATTTTGTTGTTC 57.076 29.630 0.00 0.00 0.00 3.18
3623 3747 9.923786 GTTATTGTTGGTTTATTTTGTTGTTCC 57.076 29.630 0.00 0.00 0.00 3.62
3624 3748 9.892130 TTATTGTTGGTTTATTTTGTTGTTCCT 57.108 25.926 0.00 0.00 0.00 3.36
3626 3750 8.705048 TTGTTGGTTTATTTTGTTGTTCCTAC 57.295 30.769 0.00 0.00 0.00 3.18
3627 3751 7.837863 TGTTGGTTTATTTTGTTGTTCCTACA 58.162 30.769 0.00 0.00 0.00 2.74
3628 3752 7.760340 TGTTGGTTTATTTTGTTGTTCCTACAC 59.240 33.333 0.00 0.00 32.98 2.90
3629 3753 7.648039 TGGTTTATTTTGTTGTTCCTACACT 57.352 32.000 0.00 0.00 32.98 3.55
3630 3754 8.068892 TGGTTTATTTTGTTGTTCCTACACTT 57.931 30.769 0.00 0.00 32.98 3.16
3631 3755 8.532819 TGGTTTATTTTGTTGTTCCTACACTTT 58.467 29.630 0.00 0.00 32.98 2.66
3632 3756 9.027129 GGTTTATTTTGTTGTTCCTACACTTTC 57.973 33.333 0.00 0.00 32.98 2.62
3633 3757 9.797556 GTTTATTTTGTTGTTCCTACACTTTCT 57.202 29.630 0.00 0.00 32.98 2.52
3640 3764 9.796120 TTGTTGTTCCTACACTTTCTTTTATTG 57.204 29.630 0.00 0.00 32.98 1.90
3641 3765 8.962679 TGTTGTTCCTACACTTTCTTTTATTGT 58.037 29.630 0.00 0.00 32.98 2.71
3642 3766 9.797556 GTTGTTCCTACACTTTCTTTTATTGTT 57.202 29.630 0.00 0.00 32.98 2.83
3644 3768 8.626526 TGTTCCTACACTTTCTTTTATTGTTCC 58.373 33.333 0.00 0.00 0.00 3.62
3645 3769 8.847196 GTTCCTACACTTTCTTTTATTGTTCCT 58.153 33.333 0.00 0.00 0.00 3.36
3647 3771 9.498176 TCCTACACTTTCTTTTATTGTTCCTAC 57.502 33.333 0.00 0.00 0.00 3.18
3648 3772 9.280174 CCTACACTTTCTTTTATTGTTCCTACA 57.720 33.333 0.00 0.00 0.00 2.74
3650 3774 8.747538 ACACTTTCTTTTATTGTTCCTACACT 57.252 30.769 0.00 0.00 32.98 3.55
3651 3775 9.185680 ACACTTTCTTTTATTGTTCCTACACTT 57.814 29.630 0.00 0.00 32.98 3.16
3652 3776 9.450807 CACTTTCTTTTATTGTTCCTACACTTG 57.549 33.333 0.00 0.00 32.98 3.16
3653 3777 9.403583 ACTTTCTTTTATTGTTCCTACACTTGA 57.596 29.630 0.00 0.00 32.98 3.02
3656 3780 8.974060 TCTTTTATTGTTCCTACACTTGAACT 57.026 30.769 0.00 0.00 41.10 3.01
3659 3783 7.900782 TTATTGTTCCTACACTTGAACTAGC 57.099 36.000 0.00 0.00 41.10 3.42
3660 3784 5.546621 TTGTTCCTACACTTGAACTAGCT 57.453 39.130 0.00 0.00 41.10 3.32
3661 3785 6.659745 TTGTTCCTACACTTGAACTAGCTA 57.340 37.500 0.00 0.00 41.10 3.32
3662 3786 6.268825 TGTTCCTACACTTGAACTAGCTAG 57.731 41.667 19.44 19.44 41.10 3.42
3663 3787 4.985538 TCCTACACTTGAACTAGCTAGC 57.014 45.455 20.91 6.62 0.00 3.42
3664 3788 4.601084 TCCTACACTTGAACTAGCTAGCT 58.399 43.478 23.12 23.12 0.00 3.32
3665 3789 5.752650 TCCTACACTTGAACTAGCTAGCTA 58.247 41.667 22.85 22.85 0.00 3.32
3669 3793 5.507637 ACACTTGAACTAGCTAGCTAGGTA 58.492 41.667 40.94 27.23 45.64 3.08
3680 3804 2.501492 GCTAGGTAGCTTCCCGTGA 58.499 57.895 5.64 0.00 45.62 4.35
3681 3805 0.822164 GCTAGGTAGCTTCCCGTGAA 59.178 55.000 5.64 0.00 45.62 3.18
3682 3806 1.206371 GCTAGGTAGCTTCCCGTGAAA 59.794 52.381 5.64 0.00 45.62 2.69
3683 3807 2.158943 GCTAGGTAGCTTCCCGTGAAAT 60.159 50.000 5.64 0.00 45.62 2.17
3684 3808 2.403252 AGGTAGCTTCCCGTGAAATG 57.597 50.000 5.64 0.00 0.00 2.32
3685 3809 1.628846 AGGTAGCTTCCCGTGAAATGT 59.371 47.619 5.64 0.00 0.00 2.71
3686 3810 2.039879 AGGTAGCTTCCCGTGAAATGTT 59.960 45.455 5.64 0.00 0.00 2.71
3687 3811 2.418976 GGTAGCTTCCCGTGAAATGTTC 59.581 50.000 0.00 0.00 0.00 3.18
3688 3812 2.270352 AGCTTCCCGTGAAATGTTCA 57.730 45.000 0.00 0.00 37.33 3.18
3702 3826 6.816136 TGAAATGTTCACTTACTCACTCAGA 58.184 36.000 0.00 0.00 34.08 3.27
3703 3827 6.925718 TGAAATGTTCACTTACTCACTCAGAG 59.074 38.462 0.00 0.00 41.65 3.35
3704 3828 8.426024 TGAAATGTTCACTTACTCACTCAGAGC 61.426 40.741 0.00 0.00 40.47 4.09
3760 3887 0.745128 CACCCGGCAATAGCGGTTTA 60.745 55.000 0.00 0.00 43.41 2.01
3833 3965 2.989253 CCAGGTTTCGGCCCCAAC 60.989 66.667 0.00 0.00 0.00 3.77
3847 3981 2.611722 GCCCCAACACGCACATAAATTT 60.612 45.455 0.00 0.00 0.00 1.82
3851 3985 5.872070 CCCCAACACGCACATAAATTTAAAT 59.128 36.000 1.21 0.00 0.00 1.40
3857 3991 8.810652 ACACGCACATAAATTTAAATTTGTCT 57.189 26.923 28.45 12.77 38.90 3.41
3943 4082 1.600636 CACCATGCCACAGTTCGGT 60.601 57.895 0.00 0.00 0.00 4.69
4061 4261 4.681978 GGTGTCGGCGTGGCTTCT 62.682 66.667 6.85 0.00 0.00 2.85
4064 4264 3.414700 GTCGGCGTGGCTTCTGTG 61.415 66.667 6.85 0.00 0.00 3.66
4098 4322 3.611674 TCGGCGTGGCTTCTGTGA 61.612 61.111 6.85 0.00 0.00 3.58
4212 4653 2.828549 CCGCCAAGTACCATGCCC 60.829 66.667 0.00 0.00 0.00 5.36
4246 4687 4.129737 CGTCGACATGTCCGCCCT 62.130 66.667 20.03 0.00 0.00 5.19
4384 4857 1.294659 CTCTTGGCAGCGTGGTTCTC 61.295 60.000 0.00 0.00 0.00 2.87
4460 4980 1.065401 CGTCTTGGCTCTTTTGTTGCA 59.935 47.619 0.00 0.00 0.00 4.08
4636 5162 0.650512 GCGGTACATGGTGAACATCG 59.349 55.000 0.00 0.00 37.84 3.84
4720 5255 0.460311 GCGGCTGTACATACCTGACT 59.540 55.000 11.99 0.00 0.00 3.41
4888 5424 0.944386 AACTTGCGCTCATTGAACGT 59.056 45.000 9.73 0.00 0.00 3.99
4890 5426 0.179215 CTTGCGCTCATTGAACGTCC 60.179 55.000 9.73 0.00 0.00 4.79
4911 5447 1.066215 ACTTGATGCGCATCCAGTACA 60.066 47.619 40.37 24.63 40.64 2.90
5115 5720 0.383590 CGAGCTCGTCATCCATGTCT 59.616 55.000 27.79 0.00 34.11 3.41
5300 5934 0.532196 GGCGAGTAGTTGTATGGGGC 60.532 60.000 0.00 0.00 0.00 5.80
5688 6416 2.431771 TCGGTGTTCGACATGCCG 60.432 61.111 0.00 0.00 43.74 5.69
5732 6460 1.517832 GCTTCCTCTGCTTCGGCTA 59.482 57.895 0.00 0.00 42.37 3.93
5737 6465 1.520342 CTCTGCTTCGGCTAGGTGC 60.520 63.158 0.00 0.00 42.37 5.01
5786 6522 1.135916 CGAATACTTTTTCGGCGGCAA 60.136 47.619 10.53 0.00 43.59 4.52
6388 7165 1.035923 TGATGATCACTCGCTCTCCC 58.964 55.000 0.00 0.00 0.00 4.30
6392 7169 1.743321 GATCACTCGCTCTCCCCCTG 61.743 65.000 0.00 0.00 0.00 4.45
6429 11159 3.119814 TGCACACTTCTTCTAGAGCGTAG 60.120 47.826 0.00 0.00 0.00 3.51
6430 11160 3.127203 GCACACTTCTTCTAGAGCGTAGA 59.873 47.826 0.00 0.00 0.00 2.59
6431 11161 4.729458 GCACACTTCTTCTAGAGCGTAGAG 60.729 50.000 0.00 0.00 0.00 2.43
6565 11355 3.238108 AGCAACGACAAGATCACCTAG 57.762 47.619 0.00 0.00 0.00 3.02
6611 11440 0.179217 TACGCACGCACGTAGTAGTG 60.179 55.000 6.45 0.00 46.19 2.74
6735 11576 1.480954 GACCGAATCAGCTGGGAGTTA 59.519 52.381 15.13 0.00 0.00 2.24
6736 11577 1.482593 ACCGAATCAGCTGGGAGTTAG 59.517 52.381 15.13 4.79 0.00 2.34
6799 11653 1.882625 TCGATCGCCATGGCTTTCG 60.883 57.895 34.49 34.49 41.28 3.46
6913 12983 7.431249 TCTGTTAACTAGTTGACCACTTACAG 58.569 38.462 23.33 17.53 36.88 2.74
6960 13030 4.615588 TTTTAAAACTGGAATGGGGCTG 57.384 40.909 0.00 0.00 0.00 4.85
6962 13032 0.486879 AAAACTGGAATGGGGCTGGA 59.513 50.000 0.00 0.00 0.00 3.86
6963 13033 0.040204 AAACTGGAATGGGGCTGGAG 59.960 55.000 0.00 0.00 0.00 3.86
6964 13034 2.123982 CTGGAATGGGGCTGGAGC 60.124 66.667 0.00 0.00 41.14 4.70
6966 13036 2.220786 CTGGAATGGGGCTGGAGCTT 62.221 60.000 0.00 0.00 41.70 3.74
6967 13037 1.000866 GGAATGGGGCTGGAGCTTT 59.999 57.895 0.00 0.00 41.70 3.51
7000 14976 9.125026 TCATTGATTAAAGAGAAGGAAATAGGC 57.875 33.333 0.00 0.00 0.00 3.93
7016 14992 2.420058 AGGCCGAGACCCAAAATAAG 57.580 50.000 0.00 0.00 0.00 1.73
7042 15057 2.767505 ACCTCACGTCACAAAAGGATC 58.232 47.619 0.00 0.00 0.00 3.36
7176 15221 9.112725 CCTTTCTTTTCAAATTTTCCAACTCAT 57.887 29.630 0.00 0.00 0.00 2.90
7250 15299 4.566360 CGTGCAAAAACCATCCCAATATTC 59.434 41.667 0.00 0.00 0.00 1.75
7264 15313 5.551583 TCCCAATATTCTACCACATAGCCAT 59.448 40.000 0.00 0.00 0.00 4.40
7351 15401 7.503549 TCAAAGAGCATATGAGAAGCAATCTA 58.496 34.615 6.97 0.00 38.96 1.98
7378 15428 2.292267 GGCTTTGCAGAGCTAGCATAA 58.708 47.619 26.42 9.87 42.33 1.90
7386 15436 2.615912 CAGAGCTAGCATAAAGGTTGGC 59.384 50.000 18.83 0.00 0.00 4.52
7395 15445 3.214328 CATAAAGGTTGGCGAGGCTATT 58.786 45.455 0.00 0.00 0.00 1.73
7410 15460 6.276847 CGAGGCTATTCTCTTATCACAAGTT 58.723 40.000 0.00 0.00 0.00 2.66
7427 15477 2.227194 AGTTGACCCGACATCCAAAAC 58.773 47.619 0.00 0.00 0.00 2.43
7428 15478 1.268625 GTTGACCCGACATCCAAAACC 59.731 52.381 0.00 0.00 0.00 3.27
7511 15585 7.068348 GGTCTACCTGAGATGATGTGTACTTTA 59.932 40.741 0.00 0.00 36.29 1.85
7513 15587 6.605471 ACCTGAGATGATGTGTACTTTACA 57.395 37.500 0.00 0.00 36.08 2.41
7575 15649 4.357918 ACAGTGGAATAGCTTCACTTGT 57.642 40.909 0.00 0.93 32.70 3.16
7577 15651 3.438087 CAGTGGAATAGCTTCACTTGTGG 59.562 47.826 0.00 0.00 32.70 4.17
7659 15815 3.497640 CCAAATCAGAGAGGCAATCGATC 59.502 47.826 0.00 0.00 0.00 3.69
7674 15830 2.742774 TCGATCGTTGCTATCACATGG 58.257 47.619 15.94 0.00 0.00 3.66
7697 15853 2.911819 ACGTGAATTGGCCGTAATTG 57.088 45.000 5.80 0.00 32.22 2.32
7698 15854 1.470890 ACGTGAATTGGCCGTAATTGG 59.529 47.619 5.80 0.00 32.22 3.16
7701 15857 1.740585 TGAATTGGCCGTAATTGGTCG 59.259 47.619 5.80 0.00 35.99 4.79
7703 15859 2.695127 ATTGGCCGTAATTGGTCGTA 57.305 45.000 0.00 0.00 35.99 3.43
7708 15864 1.846175 GCCGTAATTGGTCGTACGTAC 59.154 52.381 15.90 15.90 41.13 3.67
7710 15866 3.497118 CCGTAATTGGTCGTACGTACAA 58.503 45.455 24.50 22.31 41.13 2.41
7724 15880 3.910648 ACGTACAACAGCTCTCCTAAAC 58.089 45.455 0.00 0.00 0.00 2.01
7767 15926 9.519191 TGATTTCCATCAACAATATATAGTGGG 57.481 33.333 14.24 5.76 36.41 4.61
7808 16238 2.613595 GTTGATGAGCACACAAGACACA 59.386 45.455 0.00 0.00 0.00 3.72
7818 16248 4.787563 GCACACAAGACACAACTCTGATTG 60.788 45.833 0.00 0.00 35.59 2.67
7926 16356 8.110860 TCATTGATTAAGGAGAAGGAAACAAC 57.889 34.615 0.00 0.00 0.00 3.32
7940 16370 0.178990 AACAACTTGGCAGAGACCCC 60.179 55.000 4.13 0.00 0.00 4.95
7953 16384 4.327680 CAGAGACCCCAAGTAAAAAGAGG 58.672 47.826 0.00 0.00 0.00 3.69
7988 16419 4.189639 AGGACAGGTTCAACGTAATCTC 57.810 45.455 0.00 0.00 0.00 2.75
8033 16479 6.325596 GCCTTCATCCTTGATGTTTTTACTC 58.674 40.000 4.17 0.00 40.55 2.59
8099 16545 6.313744 TCCTTTCTTTCGAGATTTTCCAAC 57.686 37.500 0.00 0.00 0.00 3.77
8103 16549 5.418310 TCTTTCGAGATTTTCCAACACAC 57.582 39.130 0.00 0.00 0.00 3.82
8177 16629 3.763360 CCAAAAACTGCCTGATCCATACA 59.237 43.478 0.00 0.00 0.00 2.29
8196 16648 4.818534 ACATGCAAATAGGTTAGCATCG 57.181 40.909 0.00 0.00 45.14 3.84
8199 16651 3.013219 TGCAAATAGGTTAGCATCGCAA 58.987 40.909 0.00 0.00 31.05 4.85
8200 16652 3.181501 TGCAAATAGGTTAGCATCGCAAC 60.182 43.478 0.00 0.00 31.05 4.17
8202 16654 3.560636 AATAGGTTAGCATCGCAACCT 57.439 42.857 19.48 19.48 44.98 3.50
8203 16655 2.309528 TAGGTTAGCATCGCAACCTG 57.690 50.000 22.20 0.00 43.83 4.00
8204 16656 0.613260 AGGTTAGCATCGCAACCTGA 59.387 50.000 16.70 0.00 43.11 3.86
8205 16657 1.210478 AGGTTAGCATCGCAACCTGAT 59.790 47.619 16.70 0.89 43.11 2.90
8206 16658 1.599542 GGTTAGCATCGCAACCTGATC 59.400 52.381 10.91 0.00 37.04 2.92
8247 16699 0.396556 TAGCACCGCTACCTGATCCA 60.397 55.000 0.00 0.00 40.44 3.41
8248 16700 1.050988 AGCACCGCTACCTGATCCAT 61.051 55.000 0.00 0.00 36.99 3.41
8288 16740 9.102757 TCCTCTTGAAATATCTGAAATTCGAAG 57.897 33.333 3.35 0.00 0.00 3.79
8317 16770 0.106708 GAGGCAATCTCGGGTGCATA 59.893 55.000 0.00 0.00 42.74 3.14
8321 16774 2.362077 GGCAATCTCGGGTGCATATTTT 59.638 45.455 0.00 0.00 42.74 1.82
8369 16822 2.550855 GCCATCCTCTTGTCACAAGTCA 60.551 50.000 17.27 3.12 0.00 3.41
8420 16873 5.450965 GGACAAAGCCATGTGAATATCCTTG 60.451 44.000 0.00 0.00 32.57 3.61
8449 16904 3.730963 CGCTGTACTTCATTCGAGTAGCA 60.731 47.826 0.00 0.00 31.34 3.49
8466 16921 6.422344 AGTAGCATGACTTGAGATGATCAT 57.578 37.500 8.25 8.25 37.89 2.45
8515 16970 7.710044 ACATGAACTATAGCATGACAAAGAGAG 59.290 37.037 20.68 0.00 43.43 3.20
8545 17000 4.524328 GGCCCCTCAAATATAGTTCCATTG 59.476 45.833 0.00 0.00 0.00 2.82
8601 17056 5.508200 TTGCTTGTCGTACTTTCCATTTT 57.492 34.783 0.00 0.00 0.00 1.82
8652 17109 5.337491 GGGTTAAATCATGGATGCACTTTGT 60.337 40.000 0.00 0.00 0.00 2.83
8663 17120 4.640201 GGATGCACTTTGTCTAGCCAAATA 59.360 41.667 0.00 0.00 34.07 1.40
8664 17121 5.300286 GGATGCACTTTGTCTAGCCAAATAT 59.700 40.000 0.00 0.00 34.07 1.28
8665 17122 6.183360 GGATGCACTTTGTCTAGCCAAATATT 60.183 38.462 0.00 0.00 34.07 1.28
8666 17123 6.194796 TGCACTTTGTCTAGCCAAATATTC 57.805 37.500 0.00 0.00 34.07 1.75
8667 17124 5.709631 TGCACTTTGTCTAGCCAAATATTCA 59.290 36.000 0.00 0.00 34.07 2.57
8668 17125 6.127925 TGCACTTTGTCTAGCCAAATATTCAG 60.128 38.462 0.00 0.00 34.07 3.02
8669 17126 6.127897 GCACTTTGTCTAGCCAAATATTCAGT 60.128 38.462 0.00 0.00 34.07 3.41
8713 17199 1.443194 GCAGCAGCAACATCAACGG 60.443 57.895 0.00 0.00 41.58 4.44
8716 17202 2.568090 CAGCAACATCAACGGGCC 59.432 61.111 0.00 0.00 0.00 5.80
8719 17205 1.080569 GCAACATCAACGGGCCAAG 60.081 57.895 4.39 0.00 0.00 3.61
8720 17206 1.523154 GCAACATCAACGGGCCAAGA 61.523 55.000 4.39 0.00 0.00 3.02
8726 17212 1.028905 TCAACGGGCCAAGAAAACAG 58.971 50.000 4.39 0.00 0.00 3.16
8731 17217 1.396996 CGGGCCAAGAAAACAGATACG 59.603 52.381 4.39 0.00 0.00 3.06
8739 17225 5.220835 CCAAGAAAACAGATACGCATGCATA 60.221 40.000 19.57 7.36 0.00 3.14
8750 17236 1.069703 CGCATGCATAATGGAGTTCGG 60.070 52.381 19.57 0.00 36.71 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.671070 CCTTGATGACGTGGGGCT 59.329 61.111 0.00 0.00 0.00 5.19
1 2 3.134127 GCCTTGATGACGTGGGGC 61.134 66.667 0.00 0.00 0.00 5.80
2 3 2.819595 CGCCTTGATGACGTGGGG 60.820 66.667 0.00 0.00 0.00 4.96
5 6 0.439985 CTGAACGCCTTGATGACGTG 59.560 55.000 0.00 0.00 40.44 4.49
6 7 0.670546 CCTGAACGCCTTGATGACGT 60.671 55.000 0.00 0.00 42.81 4.34
8 9 1.079503 GACCTGAACGCCTTGATGAC 58.920 55.000 0.00 0.00 0.00 3.06
9 10 0.684535 TGACCTGAACGCCTTGATGA 59.315 50.000 0.00 0.00 0.00 2.92
10 11 1.522668 TTGACCTGAACGCCTTGATG 58.477 50.000 0.00 0.00 0.00 3.07
11 12 2.359900 GATTGACCTGAACGCCTTGAT 58.640 47.619 0.00 0.00 0.00 2.57
12 13 1.808411 GATTGACCTGAACGCCTTGA 58.192 50.000 0.00 0.00 0.00 3.02
13 14 0.443869 CGATTGACCTGAACGCCTTG 59.556 55.000 0.00 0.00 0.00 3.61
14 15 0.673644 CCGATTGACCTGAACGCCTT 60.674 55.000 0.00 0.00 0.00 4.35
15 16 1.079127 CCGATTGACCTGAACGCCT 60.079 57.895 0.00 0.00 0.00 5.52
16 17 2.106683 CCCGATTGACCTGAACGCC 61.107 63.158 0.00 0.00 0.00 5.68
17 18 1.079405 TCCCGATTGACCTGAACGC 60.079 57.895 0.00 0.00 0.00 4.84
18 19 0.530744 TCTCCCGATTGACCTGAACG 59.469 55.000 0.00 0.00 0.00 3.95
19 20 1.825474 TCTCTCCCGATTGACCTGAAC 59.175 52.381 0.00 0.00 0.00 3.18
20 21 2.103373 CTCTCTCCCGATTGACCTGAA 58.897 52.381 0.00 0.00 0.00 3.02
21 22 1.285078 TCTCTCTCCCGATTGACCTGA 59.715 52.381 0.00 0.00 0.00 3.86
22 23 1.769026 TCTCTCTCCCGATTGACCTG 58.231 55.000 0.00 0.00 0.00 4.00
23 24 2.765689 ATCTCTCTCCCGATTGACCT 57.234 50.000 0.00 0.00 0.00 3.85
24 25 2.287909 CGAATCTCTCTCCCGATTGACC 60.288 54.545 0.00 0.00 30.49 4.02
25 26 2.860582 GCGAATCTCTCTCCCGATTGAC 60.861 54.545 0.00 0.00 30.49 3.18
26 27 1.338337 GCGAATCTCTCTCCCGATTGA 59.662 52.381 0.00 0.00 30.49 2.57
27 28 1.777101 GCGAATCTCTCTCCCGATTG 58.223 55.000 0.00 0.00 30.49 2.67
28 29 0.312416 CGCGAATCTCTCTCCCGATT 59.688 55.000 0.00 0.00 32.86 3.34
29 30 1.953017 CGCGAATCTCTCTCCCGAT 59.047 57.895 0.00 0.00 0.00 4.18
30 31 2.835705 GCGCGAATCTCTCTCCCGA 61.836 63.158 12.10 0.00 0.00 5.14
31 32 2.354072 GCGCGAATCTCTCTCCCG 60.354 66.667 12.10 0.00 0.00 5.14
32 33 1.299773 CAGCGCGAATCTCTCTCCC 60.300 63.158 12.10 0.00 0.00 4.30
33 34 1.948635 GCAGCGCGAATCTCTCTCC 60.949 63.158 12.10 0.00 0.00 3.71
34 35 1.948635 GGCAGCGCGAATCTCTCTC 60.949 63.158 12.10 0.00 0.00 3.20
35 36 2.105930 GGCAGCGCGAATCTCTCT 59.894 61.111 12.10 0.00 0.00 3.10
36 37 2.964389 GGGCAGCGCGAATCTCTC 60.964 66.667 12.10 0.00 0.00 3.20
37 38 2.599645 ATTGGGCAGCGCGAATCTCT 62.600 55.000 12.10 0.00 0.00 3.10
38 39 2.110734 GATTGGGCAGCGCGAATCTC 62.111 60.000 12.10 0.00 0.00 2.75
39 40 2.124570 ATTGGGCAGCGCGAATCT 60.125 55.556 12.10 0.00 0.00 2.40
40 41 2.329339 GATTGGGCAGCGCGAATC 59.671 61.111 12.10 5.10 0.00 2.52
41 42 3.576356 CGATTGGGCAGCGCGAAT 61.576 61.111 12.10 0.00 0.00 3.34
46 47 3.869272 GAGCACGATTGGGCAGCG 61.869 66.667 10.54 0.00 0.00 5.18
47 48 3.869272 CGAGCACGATTGGGCAGC 61.869 66.667 10.54 0.00 42.66 5.25
48 49 2.434884 ACGAGCACGATTGGGCAG 60.435 61.111 10.54 5.52 42.66 4.85
49 50 2.434185 GACGAGCACGATTGGGCA 60.434 61.111 10.54 0.00 42.66 5.36
50 51 3.195698 GGACGAGCACGATTGGGC 61.196 66.667 11.40 0.00 42.66 5.36
51 52 2.100631 GTGGACGAGCACGATTGGG 61.101 63.158 11.40 0.00 42.66 4.12
52 53 2.444624 CGTGGACGAGCACGATTGG 61.445 63.158 11.40 0.00 46.46 3.16
53 54 3.071459 GCGTGGACGAGCACGATTG 62.071 63.158 11.40 0.00 46.46 2.67
54 55 2.809601 GCGTGGACGAGCACGATT 60.810 61.111 11.40 0.00 46.46 3.34
58 59 3.470567 CTTCGCGTGGACGAGCAC 61.471 66.667 5.77 0.00 44.00 4.40
61 62 2.430921 AAGCTTCGCGTGGACGAG 60.431 61.111 5.77 0.00 44.00 4.18
62 63 2.430244 GAAGCTTCGCGTGGACGA 60.430 61.111 11.40 0.00 43.02 4.20
63 64 3.479269 GGAAGCTTCGCGTGGACG 61.479 66.667 19.91 0.00 43.27 4.79
64 65 2.048127 AGGAAGCTTCGCGTGGAC 60.048 61.111 19.91 4.53 0.00 4.02
65 66 2.261671 GAGGAAGCTTCGCGTGGA 59.738 61.111 19.91 0.00 0.00 4.02
66 67 2.815647 GGAGGAAGCTTCGCGTGG 60.816 66.667 19.91 0.78 0.00 4.94
67 68 2.815647 GGGAGGAAGCTTCGCGTG 60.816 66.667 19.91 1.17 0.00 5.34
68 69 4.083862 GGGGAGGAAGCTTCGCGT 62.084 66.667 19.91 7.32 0.00 6.01
69 70 4.082523 TGGGGAGGAAGCTTCGCG 62.083 66.667 19.91 0.00 0.00 5.87
70 71 2.436824 GTGGGGAGGAAGCTTCGC 60.437 66.667 19.91 13.94 0.00 4.70
71 72 2.269241 GGTGGGGAGGAAGCTTCG 59.731 66.667 19.91 0.00 0.00 3.79
72 73 2.677848 GGGTGGGGAGGAAGCTTC 59.322 66.667 18.54 18.54 0.00 3.86
73 74 2.941583 GGGGTGGGGAGGAAGCTT 60.942 66.667 0.00 0.00 0.00 3.74
74 75 4.285790 TGGGGTGGGGAGGAAGCT 62.286 66.667 0.00 0.00 0.00 3.74
75 76 4.048470 GTGGGGTGGGGAGGAAGC 62.048 72.222 0.00 0.00 0.00 3.86
76 77 3.339093 GGTGGGGTGGGGAGGAAG 61.339 72.222 0.00 0.00 0.00 3.46
77 78 3.882670 AGGTGGGGTGGGGAGGAA 61.883 66.667 0.00 0.00 0.00 3.36
78 79 4.348495 GAGGTGGGGTGGGGAGGA 62.348 72.222 0.00 0.00 0.00 3.71
83 84 4.410400 GAAGCGAGGTGGGGTGGG 62.410 72.222 0.00 0.00 0.00 4.61
84 85 4.760047 CGAAGCGAGGTGGGGTGG 62.760 72.222 0.00 0.00 0.00 4.61
85 86 3.934391 GACGAAGCGAGGTGGGGTG 62.934 68.421 0.00 0.00 0.00 4.61
86 87 3.692406 GACGAAGCGAGGTGGGGT 61.692 66.667 0.00 0.00 0.00 4.95
87 88 4.796231 CGACGAAGCGAGGTGGGG 62.796 72.222 0.00 0.00 0.00 4.96
89 90 2.537792 TTAGCGACGAAGCGAGGTGG 62.538 60.000 0.00 0.00 43.00 4.61
90 91 1.134530 CTTAGCGACGAAGCGAGGTG 61.135 60.000 0.00 0.00 43.00 4.00
91 92 1.136984 CTTAGCGACGAAGCGAGGT 59.863 57.895 0.00 0.00 43.00 3.85
92 93 0.179171 TTCTTAGCGACGAAGCGAGG 60.179 55.000 0.00 0.00 43.00 4.63
93 94 1.579808 CTTTCTTAGCGACGAAGCGAG 59.420 52.381 0.00 0.00 43.00 5.03
94 95 1.198408 TCTTTCTTAGCGACGAAGCGA 59.802 47.619 0.00 0.00 43.00 4.93
95 96 1.614385 TCTTTCTTAGCGACGAAGCG 58.386 50.000 0.00 0.00 43.00 4.68
96 97 3.673809 TCTTTCTTTCTTAGCGACGAAGC 59.326 43.478 0.00 0.00 37.41 3.86
97 98 4.324936 CCTCTTTCTTTCTTAGCGACGAAG 59.675 45.833 0.00 0.00 0.00 3.79
98 99 4.235360 CCTCTTTCTTTCTTAGCGACGAA 58.765 43.478 0.00 0.00 0.00 3.85
99 100 3.367087 CCCTCTTTCTTTCTTAGCGACGA 60.367 47.826 0.00 0.00 0.00 4.20
100 101 2.924290 CCCTCTTTCTTTCTTAGCGACG 59.076 50.000 0.00 0.00 0.00 5.12
101 102 4.082136 TCTCCCTCTTTCTTTCTTAGCGAC 60.082 45.833 0.00 0.00 0.00 5.19
102 103 4.082136 GTCTCCCTCTTTCTTTCTTAGCGA 60.082 45.833 0.00 0.00 0.00 4.93
103 104 4.177783 GTCTCCCTCTTTCTTTCTTAGCG 58.822 47.826 0.00 0.00 0.00 4.26
104 105 5.153950 TGTCTCCCTCTTTCTTTCTTAGC 57.846 43.478 0.00 0.00 0.00 3.09
105 106 6.992715 TGTTTGTCTCCCTCTTTCTTTCTTAG 59.007 38.462 0.00 0.00 0.00 2.18
106 107 6.766467 GTGTTTGTCTCCCTCTTTCTTTCTTA 59.234 38.462 0.00 0.00 0.00 2.10
107 108 5.590663 GTGTTTGTCTCCCTCTTTCTTTCTT 59.409 40.000 0.00 0.00 0.00 2.52
108 109 5.126779 GTGTTTGTCTCCCTCTTTCTTTCT 58.873 41.667 0.00 0.00 0.00 2.52
109 110 4.276183 GGTGTTTGTCTCCCTCTTTCTTTC 59.724 45.833 0.00 0.00 0.00 2.62
110 111 4.079730 AGGTGTTTGTCTCCCTCTTTCTTT 60.080 41.667 0.00 0.00 0.00 2.52
111 112 3.459969 AGGTGTTTGTCTCCCTCTTTCTT 59.540 43.478 0.00 0.00 0.00 2.52
112 113 3.049344 AGGTGTTTGTCTCCCTCTTTCT 58.951 45.455 0.00 0.00 0.00 2.52
113 114 3.403968 GAGGTGTTTGTCTCCCTCTTTC 58.596 50.000 0.00 0.00 40.30 2.62
114 115 2.106684 GGAGGTGTTTGTCTCCCTCTTT 59.893 50.000 0.00 0.00 42.72 2.52
115 116 1.700186 GGAGGTGTTTGTCTCCCTCTT 59.300 52.381 0.00 0.00 42.72 2.85
116 117 1.353091 GGAGGTGTTTGTCTCCCTCT 58.647 55.000 0.00 0.00 42.72 3.69
117 118 3.938109 GGAGGTGTTTGTCTCCCTC 57.062 57.895 0.00 0.00 42.72 4.30
121 122 2.610727 CGAGGAAGGAGGTGTTTGTCTC 60.611 54.545 0.00 0.00 0.00 3.36
122 123 1.344763 CGAGGAAGGAGGTGTTTGTCT 59.655 52.381 0.00 0.00 0.00 3.41
123 124 1.343465 TCGAGGAAGGAGGTGTTTGTC 59.657 52.381 0.00 0.00 0.00 3.18
124 125 1.070289 GTCGAGGAAGGAGGTGTTTGT 59.930 52.381 0.00 0.00 0.00 2.83
125 126 1.070134 TGTCGAGGAAGGAGGTGTTTG 59.930 52.381 0.00 0.00 0.00 2.93
126 127 1.070289 GTGTCGAGGAAGGAGGTGTTT 59.930 52.381 0.00 0.00 0.00 2.83
127 128 0.680061 GTGTCGAGGAAGGAGGTGTT 59.320 55.000 0.00 0.00 0.00 3.32
128 129 1.186267 GGTGTCGAGGAAGGAGGTGT 61.186 60.000 0.00 0.00 0.00 4.16
129 130 1.592223 GGTGTCGAGGAAGGAGGTG 59.408 63.158 0.00 0.00 0.00 4.00
130 131 1.977544 CGGTGTCGAGGAAGGAGGT 60.978 63.158 0.00 0.00 39.00 3.85
131 132 2.885861 CGGTGTCGAGGAAGGAGG 59.114 66.667 0.00 0.00 39.00 4.30
132 133 2.182030 GCGGTGTCGAGGAAGGAG 59.818 66.667 0.00 0.00 39.00 3.69
133 134 3.379445 GGCGGTGTCGAGGAAGGA 61.379 66.667 0.00 0.00 39.00 3.36
134 135 4.796231 CGGCGGTGTCGAGGAAGG 62.796 72.222 0.00 0.00 39.00 3.46
153 154 4.521062 GAGAGCGCCTCGGCATGT 62.521 66.667 2.29 0.00 42.06 3.21
338 350 2.732658 GAGGTTGTCGTCGGTGGT 59.267 61.111 0.00 0.00 0.00 4.16
570 592 1.004320 CGGTCGGGATGAAACCACA 60.004 57.895 0.00 0.00 32.35 4.17
640 662 0.464452 GGATTGGACGAGGGTGTAGG 59.536 60.000 0.00 0.00 0.00 3.18
856 944 0.336737 GGAGAGGAGGAAGGAGTGGA 59.663 60.000 0.00 0.00 0.00 4.02
901 1006 2.008400 TGGGAGAAGTAGAGGGGAAGA 58.992 52.381 0.00 0.00 0.00 2.87
1014 1121 3.133691 CGTCCACATGAATCCCTGTATG 58.866 50.000 0.00 0.00 0.00 2.39
1156 1265 4.116328 CTCGAAGTCTGCGCGGGA 62.116 66.667 17.88 7.67 0.00 5.14
1427 1537 5.277634 CGTTAACCACAAAGTTAGGGAACTG 60.278 44.000 0.00 0.00 45.50 3.16
1434 1544 4.383173 ACCTCCGTTAACCACAAAGTTAG 58.617 43.478 0.00 0.00 33.89 2.34
1471 1581 3.895656 AGTAGCTTGTTGTACTCCTCACA 59.104 43.478 0.00 0.00 0.00 3.58
1606 1717 4.021016 AGCGACAGAAAATAGTGAAGGTCT 60.021 41.667 0.00 0.00 0.00 3.85
1679 1790 7.451501 TCTATTGACATTTCAAATCTGCACA 57.548 32.000 0.00 0.00 45.01 4.57
1714 1825 8.637099 CATTCTCTTCATATAACTCCTGACAGA 58.363 37.037 3.32 0.00 0.00 3.41
1717 1828 7.015682 TCCCATTCTCTTCATATAACTCCTGAC 59.984 40.741 0.00 0.00 0.00 3.51
1723 1834 9.159254 TGTACATCCCATTCTCTTCATATAACT 57.841 33.333 0.00 0.00 0.00 2.24
1726 1837 9.159254 ACTTGTACATCCCATTCTCTTCATATA 57.841 33.333 0.00 0.00 0.00 0.86
1738 1849 4.927267 TCCTTGAACTTGTACATCCCAT 57.073 40.909 0.00 0.00 0.00 4.00
1824 1935 5.106869 TGCGTGAATCATGTACAGGTTAAAC 60.107 40.000 7.49 2.36 0.00 2.01
1901 2012 5.674525 TGAAACTTGACTGCCTCCTATATG 58.325 41.667 0.00 0.00 0.00 1.78
1936 2047 8.725148 GCATCCTAATAGGTTCAAATATCACAG 58.275 37.037 6.17 0.00 36.53 3.66
1990 2101 5.518848 TGAAGTGCACAATCAAACTGAAT 57.481 34.783 21.04 0.00 0.00 2.57
2178 2289 9.720874 ATGGAGAATATCTGAATACTATAGGCA 57.279 33.333 4.43 0.00 0.00 4.75
2227 2338 6.889019 ATTAACGAAGTAGCAAAGTAGAGC 57.111 37.500 0.00 0.00 45.00 4.09
2241 2352 8.142551 ACCTATAGCTTCAACCTATTAACGAAG 58.857 37.037 0.00 0.00 36.89 3.79
2244 2355 7.431249 TGACCTATAGCTTCAACCTATTAACG 58.569 38.462 0.00 0.00 0.00 3.18
2295 2406 0.610174 GGTGGAGATGACACTGAGCA 59.390 55.000 0.00 0.00 38.83 4.26
2328 2439 3.378112 GCAATATTAGCAGCACCTCAACA 59.622 43.478 0.00 0.00 0.00 3.33
2380 2491 3.504520 TGAAAGCGGAAAATAACCTGACC 59.495 43.478 0.00 0.00 0.00 4.02
2386 2497 7.250569 TCATCTTGATGAAAGCGGAAAATAAC 58.749 34.615 10.50 0.00 35.69 1.89
2397 2508 6.758416 TCACGTTATCCTCATCTTGATGAAAG 59.242 38.462 13.42 8.72 37.22 2.62
2398 2509 6.535150 GTCACGTTATCCTCATCTTGATGAAA 59.465 38.462 13.42 6.36 0.00 2.69
2399 2510 6.042777 GTCACGTTATCCTCATCTTGATGAA 58.957 40.000 13.42 1.84 0.00 2.57
2400 2511 5.360999 AGTCACGTTATCCTCATCTTGATGA 59.639 40.000 12.10 12.10 0.00 2.92
2401 2512 5.461407 CAGTCACGTTATCCTCATCTTGATG 59.539 44.000 4.35 4.35 0.00 3.07
2402 2513 5.127845 ACAGTCACGTTATCCTCATCTTGAT 59.872 40.000 0.00 0.00 0.00 2.57
2403 2514 4.462834 ACAGTCACGTTATCCTCATCTTGA 59.537 41.667 0.00 0.00 0.00 3.02
2404 2515 4.748892 ACAGTCACGTTATCCTCATCTTG 58.251 43.478 0.00 0.00 0.00 3.02
2405 2516 5.407407 AACAGTCACGTTATCCTCATCTT 57.593 39.130 0.00 0.00 0.00 2.40
2406 2517 5.171476 CAAACAGTCACGTTATCCTCATCT 58.829 41.667 0.00 0.00 0.00 2.90
2407 2518 4.929808 ACAAACAGTCACGTTATCCTCATC 59.070 41.667 0.00 0.00 0.00 2.92
2408 2519 4.690748 CACAAACAGTCACGTTATCCTCAT 59.309 41.667 0.00 0.00 0.00 2.90
2409 2520 4.055360 CACAAACAGTCACGTTATCCTCA 58.945 43.478 0.00 0.00 0.00 3.86
2410 2521 4.056050 ACACAAACAGTCACGTTATCCTC 58.944 43.478 0.00 0.00 0.00 3.71
2411 2522 3.807622 CACACAAACAGTCACGTTATCCT 59.192 43.478 0.00 0.00 0.00 3.24
2412 2523 3.606153 GCACACAAACAGTCACGTTATCC 60.606 47.826 0.00 0.00 0.00 2.59
2413 2524 3.541711 GCACACAAACAGTCACGTTATC 58.458 45.455 0.00 0.00 0.00 1.75
2414 2525 2.033236 CGCACACAAACAGTCACGTTAT 60.033 45.455 0.00 0.00 0.00 1.89
2415 2526 1.325037 CGCACACAAACAGTCACGTTA 59.675 47.619 0.00 0.00 0.00 3.18
2416 2527 0.096281 CGCACACAAACAGTCACGTT 59.904 50.000 0.00 0.00 0.00 3.99
2417 2528 1.017177 ACGCACACAAACAGTCACGT 61.017 50.000 0.00 0.00 0.00 4.49
2418 2529 0.586256 CACGCACACAAACAGTCACG 60.586 55.000 0.00 0.00 0.00 4.35
2419 2530 0.861450 GCACGCACACAAACAGTCAC 60.861 55.000 0.00 0.00 0.00 3.67
2420 2531 1.427419 GCACGCACACAAACAGTCA 59.573 52.632 0.00 0.00 0.00 3.41
2421 2532 1.298339 GGCACGCACACAAACAGTC 60.298 57.895 0.00 0.00 0.00 3.51
2422 2533 1.748879 AGGCACGCACACAAACAGT 60.749 52.632 0.00 0.00 0.00 3.55
2423 2534 1.298563 CAGGCACGCACACAAACAG 60.299 57.895 0.00 0.00 0.00 3.16
2424 2535 2.769539 CCAGGCACGCACACAAACA 61.770 57.895 0.00 0.00 0.00 2.83
2425 2536 2.026014 CCAGGCACGCACACAAAC 59.974 61.111 0.00 0.00 0.00 2.93
2426 2537 2.049185 AACCAGGCACGCACACAAA 61.049 52.632 0.00 0.00 0.00 2.83
2427 2538 2.439338 AACCAGGCACGCACACAA 60.439 55.556 0.00 0.00 0.00 3.33
2428 2539 3.208383 CAACCAGGCACGCACACA 61.208 61.111 0.00 0.00 0.00 3.72
2429 2540 4.629115 GCAACCAGGCACGCACAC 62.629 66.667 0.00 0.00 0.00 3.82
2435 2546 4.329545 TCTCCGGCAACCAGGCAC 62.330 66.667 0.00 0.00 44.47 5.01
2436 2547 4.329545 GTCTCCGGCAACCAGGCA 62.330 66.667 0.00 0.00 44.47 4.75
2438 2549 2.162338 TAACGTCTCCGGCAACCAGG 62.162 60.000 0.00 0.00 38.78 4.45
2439 2550 0.320073 TTAACGTCTCCGGCAACCAG 60.320 55.000 0.00 0.00 38.78 4.00
2440 2551 0.106335 TTTAACGTCTCCGGCAACCA 59.894 50.000 0.00 0.00 38.78 3.67
2441 2552 1.445871 ATTTAACGTCTCCGGCAACC 58.554 50.000 0.00 0.00 38.78 3.77
2442 2553 3.484721 GCTAATTTAACGTCTCCGGCAAC 60.485 47.826 0.00 0.00 38.78 4.17
2443 2554 2.674357 GCTAATTTAACGTCTCCGGCAA 59.326 45.455 0.00 0.00 38.78 4.52
2444 2555 2.093869 AGCTAATTTAACGTCTCCGGCA 60.094 45.455 0.00 0.00 38.78 5.69
2445 2556 2.547826 AGCTAATTTAACGTCTCCGGC 58.452 47.619 0.00 0.00 38.78 6.13
2446 2557 5.179045 TCTAGCTAATTTAACGTCTCCGG 57.821 43.478 0.00 0.00 38.78 5.14
2447 2558 6.579292 CAGATCTAGCTAATTTAACGTCTCCG 59.421 42.308 0.00 0.00 40.83 4.63
2448 2559 6.363896 GCAGATCTAGCTAATTTAACGTCTCC 59.636 42.308 0.00 0.00 0.00 3.71
2449 2560 6.363896 GGCAGATCTAGCTAATTTAACGTCTC 59.636 42.308 14.20 0.00 0.00 3.36
2450 2561 6.183360 TGGCAGATCTAGCTAATTTAACGTCT 60.183 38.462 14.20 0.00 0.00 4.18
2451 2562 5.983720 TGGCAGATCTAGCTAATTTAACGTC 59.016 40.000 14.20 0.00 0.00 4.34
2452 2563 5.914033 TGGCAGATCTAGCTAATTTAACGT 58.086 37.500 14.20 0.00 0.00 3.99
2453 2564 6.425114 ACATGGCAGATCTAGCTAATTTAACG 59.575 38.462 14.20 0.00 0.00 3.18
2454 2565 7.227512 ACACATGGCAGATCTAGCTAATTTAAC 59.772 37.037 14.20 0.38 0.00 2.01
2455 2566 7.227314 CACACATGGCAGATCTAGCTAATTTAA 59.773 37.037 14.20 0.00 0.00 1.52
2456 2567 6.707608 CACACATGGCAGATCTAGCTAATTTA 59.292 38.462 14.20 0.00 0.00 1.40
2457 2568 5.530171 CACACATGGCAGATCTAGCTAATTT 59.470 40.000 14.20 3.28 0.00 1.82
2458 2569 5.061853 CACACATGGCAGATCTAGCTAATT 58.938 41.667 14.20 0.00 0.00 1.40
2459 2570 4.102210 ACACACATGGCAGATCTAGCTAAT 59.898 41.667 14.20 7.93 0.00 1.73
2460 2571 3.452264 ACACACATGGCAGATCTAGCTAA 59.548 43.478 14.20 6.41 0.00 3.09
2461 2572 3.033909 ACACACATGGCAGATCTAGCTA 58.966 45.455 14.20 10.23 0.00 3.32
2462 2573 1.836166 ACACACATGGCAGATCTAGCT 59.164 47.619 14.20 0.00 0.00 3.32
2463 2574 2.322355 ACACACATGGCAGATCTAGC 57.678 50.000 0.00 1.48 0.00 3.42
2464 2575 3.181503 GCAAACACACATGGCAGATCTAG 60.182 47.826 0.00 0.00 0.00 2.43
2465 2576 2.749076 GCAAACACACATGGCAGATCTA 59.251 45.455 0.00 0.00 0.00 1.98
2466 2577 1.542915 GCAAACACACATGGCAGATCT 59.457 47.619 0.00 0.00 0.00 2.75
2467 2578 1.403249 GGCAAACACACATGGCAGATC 60.403 52.381 0.00 0.00 41.38 2.75
2468 2579 0.604578 GGCAAACACACATGGCAGAT 59.395 50.000 0.00 0.00 41.38 2.90
2469 2580 1.794151 CGGCAAACACACATGGCAGA 61.794 55.000 0.00 0.00 41.79 4.26
2470 2581 1.372004 CGGCAAACACACATGGCAG 60.372 57.895 0.00 0.00 41.79 4.85
2471 2582 2.726909 CGGCAAACACACATGGCA 59.273 55.556 0.00 0.00 41.79 4.92
2472 2583 2.049248 CCGGCAAACACACATGGC 60.049 61.111 0.00 0.00 38.62 4.40
2473 2584 0.888736 TCTCCGGCAAACACACATGG 60.889 55.000 0.00 0.00 0.00 3.66
2474 2585 1.135603 CATCTCCGGCAAACACACATG 60.136 52.381 0.00 0.00 0.00 3.21
2475 2586 1.167851 CATCTCCGGCAAACACACAT 58.832 50.000 0.00 0.00 0.00 3.21
2476 2587 0.179032 ACATCTCCGGCAAACACACA 60.179 50.000 0.00 0.00 0.00 3.72
2477 2588 0.951558 AACATCTCCGGCAAACACAC 59.048 50.000 0.00 0.00 0.00 3.82
2478 2589 2.552599 TAACATCTCCGGCAAACACA 57.447 45.000 0.00 0.00 0.00 3.72
2479 2590 3.438781 TGATTAACATCTCCGGCAAACAC 59.561 43.478 0.00 0.00 0.00 3.32
2480 2591 3.680490 TGATTAACATCTCCGGCAAACA 58.320 40.909 0.00 0.00 0.00 2.83
2481 2592 3.487544 GCTGATTAACATCTCCGGCAAAC 60.488 47.826 0.00 0.00 0.00 2.93
2482 2593 2.682856 GCTGATTAACATCTCCGGCAAA 59.317 45.455 0.00 0.00 0.00 3.68
2483 2594 2.092968 AGCTGATTAACATCTCCGGCAA 60.093 45.455 0.00 0.00 0.00 4.52
2484 2595 1.486310 AGCTGATTAACATCTCCGGCA 59.514 47.619 0.00 0.00 0.00 5.69
2485 2596 2.246719 AGCTGATTAACATCTCCGGC 57.753 50.000 0.00 0.00 0.00 6.13
2486 2597 4.855715 TCTAGCTGATTAACATCTCCGG 57.144 45.455 0.00 0.00 0.00 5.14
2487 2598 6.092092 CAGATCTAGCTGATTAACATCTCCG 58.908 44.000 0.00 0.00 38.14 4.63
2488 2599 5.868801 GCAGATCTAGCTGATTAACATCTCC 59.131 44.000 0.00 0.00 38.14 3.71
2489 2600 5.868801 GGCAGATCTAGCTGATTAACATCTC 59.131 44.000 14.20 0.00 38.14 2.75
2490 2601 5.543405 AGGCAGATCTAGCTGATTAACATCT 59.457 40.000 14.20 0.00 38.14 2.90
2491 2602 5.792741 AGGCAGATCTAGCTGATTAACATC 58.207 41.667 14.20 0.00 38.14 3.06
2492 2603 5.822132 AGGCAGATCTAGCTGATTAACAT 57.178 39.130 14.20 0.00 38.14 2.71
2493 2604 5.104776 ACAAGGCAGATCTAGCTGATTAACA 60.105 40.000 14.20 0.00 38.14 2.41
2494 2605 5.236047 CACAAGGCAGATCTAGCTGATTAAC 59.764 44.000 14.20 0.43 38.14 2.01
2495 2606 5.129320 TCACAAGGCAGATCTAGCTGATTAA 59.871 40.000 14.20 0.00 38.14 1.40
2496 2607 4.651045 TCACAAGGCAGATCTAGCTGATTA 59.349 41.667 14.20 0.00 38.14 1.75
2497 2608 3.453717 TCACAAGGCAGATCTAGCTGATT 59.546 43.478 14.20 6.90 38.14 2.57
2498 2609 3.036819 TCACAAGGCAGATCTAGCTGAT 58.963 45.455 14.20 0.00 38.14 2.90
2499 2610 2.460669 TCACAAGGCAGATCTAGCTGA 58.539 47.619 14.20 8.88 38.14 4.26
2500 2611 2.935201 GTTCACAAGGCAGATCTAGCTG 59.065 50.000 14.20 9.60 38.91 4.24
2501 2612 2.836981 AGTTCACAAGGCAGATCTAGCT 59.163 45.455 14.20 0.00 0.00 3.32
2502 2613 2.935201 CAGTTCACAAGGCAGATCTAGC 59.065 50.000 0.00 1.48 0.00 3.42
2503 2614 3.529533 CCAGTTCACAAGGCAGATCTAG 58.470 50.000 0.00 0.00 0.00 2.43
2504 2615 2.237143 CCCAGTTCACAAGGCAGATCTA 59.763 50.000 0.00 0.00 0.00 1.98
2505 2616 1.004044 CCCAGTTCACAAGGCAGATCT 59.996 52.381 0.00 0.00 0.00 2.75
2506 2617 1.457346 CCCAGTTCACAAGGCAGATC 58.543 55.000 0.00 0.00 0.00 2.75
2507 2618 0.038744 CCCCAGTTCACAAGGCAGAT 59.961 55.000 0.00 0.00 0.00 2.90
2508 2619 1.455849 CCCCAGTTCACAAGGCAGA 59.544 57.895 0.00 0.00 0.00 4.26
2509 2620 2.270986 GCCCCAGTTCACAAGGCAG 61.271 63.158 0.00 0.00 43.32 4.85
2510 2621 2.203480 GCCCCAGTTCACAAGGCA 60.203 61.111 0.00 0.00 43.32 4.75
2511 2622 2.203480 TGCCCCAGTTCACAAGGC 60.203 61.111 0.00 0.00 44.13 4.35
2512 2623 0.607489 CTCTGCCCCAGTTCACAAGG 60.607 60.000 0.00 0.00 32.61 3.61
2513 2624 0.607489 CCTCTGCCCCAGTTCACAAG 60.607 60.000 0.00 0.00 32.61 3.16
2514 2625 1.455849 CCTCTGCCCCAGTTCACAA 59.544 57.895 0.00 0.00 32.61 3.33
2515 2626 3.160585 CCTCTGCCCCAGTTCACA 58.839 61.111 0.00 0.00 32.61 3.58
2516 2627 2.360475 GCCTCTGCCCCAGTTCAC 60.360 66.667 0.00 0.00 32.61 3.18
2517 2628 2.853542 TGCCTCTGCCCCAGTTCA 60.854 61.111 0.00 0.00 36.33 3.18
2518 2629 2.045536 CTGCCTCTGCCCCAGTTC 60.046 66.667 0.00 0.00 36.33 3.01
2519 2630 4.357279 GCTGCCTCTGCCCCAGTT 62.357 66.667 0.00 0.00 36.33 3.16
2521 2632 2.202236 TAAAGCTGCCTCTGCCCCAG 62.202 60.000 0.00 0.00 36.33 4.45
2522 2633 1.788518 TTAAAGCTGCCTCTGCCCCA 61.789 55.000 0.00 0.00 36.33 4.96
2523 2634 0.396278 ATTAAAGCTGCCTCTGCCCC 60.396 55.000 0.00 0.00 36.33 5.80
2524 2635 1.478631 AATTAAAGCTGCCTCTGCCC 58.521 50.000 0.00 0.00 36.33 5.36
2525 2636 2.620585 CCTAATTAAAGCTGCCTCTGCC 59.379 50.000 0.00 0.00 36.33 4.85
2526 2637 2.033927 GCCTAATTAAAGCTGCCTCTGC 59.966 50.000 0.00 0.00 38.26 4.26
2527 2638 2.620585 GGCCTAATTAAAGCTGCCTCTG 59.379 50.000 0.00 0.00 35.99 3.35
2528 2639 2.511637 AGGCCTAATTAAAGCTGCCTCT 59.488 45.455 1.29 0.00 45.74 3.69
2529 2640 2.937519 AGGCCTAATTAAAGCTGCCTC 58.062 47.619 1.29 0.00 45.74 4.70
2531 2642 5.590663 GGATATAGGCCTAATTAAAGCTGCC 59.409 44.000 18.42 3.29 39.17 4.85
2532 2643 6.180472 TGGATATAGGCCTAATTAAAGCTGC 58.820 40.000 18.42 0.00 0.00 5.25
2533 2644 8.635765 TTTGGATATAGGCCTAATTAAAGCTG 57.364 34.615 18.42 0.00 0.00 4.24
2534 2645 9.467796 GATTTGGATATAGGCCTAATTAAAGCT 57.532 33.333 18.42 0.00 32.34 3.74
2535 2646 9.243105 TGATTTGGATATAGGCCTAATTAAAGC 57.757 33.333 18.42 15.75 32.34 3.51
2537 2648 9.226606 CGTGATTTGGATATAGGCCTAATTAAA 57.773 33.333 18.42 13.71 32.34 1.52
2538 2649 7.335924 GCGTGATTTGGATATAGGCCTAATTAA 59.664 37.037 18.42 5.45 32.34 1.40
2539 2650 6.821665 GCGTGATTTGGATATAGGCCTAATTA 59.178 38.462 18.42 6.01 32.34 1.40
2540 2651 5.648092 GCGTGATTTGGATATAGGCCTAATT 59.352 40.000 18.42 7.09 32.34 1.40
2541 2652 5.186198 GCGTGATTTGGATATAGGCCTAAT 58.814 41.667 18.42 11.60 34.35 1.73
2542 2653 4.041075 TGCGTGATTTGGATATAGGCCTAA 59.959 41.667 18.42 6.84 0.00 2.69
2543 2654 3.580895 TGCGTGATTTGGATATAGGCCTA 59.419 43.478 16.60 16.60 0.00 3.93
2544 2655 2.371841 TGCGTGATTTGGATATAGGCCT 59.628 45.455 11.78 11.78 0.00 5.19
2545 2656 2.778299 TGCGTGATTTGGATATAGGCC 58.222 47.619 0.00 0.00 0.00 5.19
2546 2657 3.426695 GCATGCGTGATTTGGATATAGGC 60.427 47.826 10.93 0.00 0.00 3.93
2547 2658 3.752747 TGCATGCGTGATTTGGATATAGG 59.247 43.478 14.09 0.00 0.00 2.57
2548 2659 5.329493 CATGCATGCGTGATTTGGATATAG 58.671 41.667 31.95 2.36 35.09 1.31
2549 2660 4.379708 GCATGCATGCGTGATTTGGATATA 60.380 41.667 37.79 5.54 44.67 0.86
2550 2661 3.613193 GCATGCATGCGTGATTTGGATAT 60.613 43.478 37.79 8.44 44.67 1.63
2551 2662 2.287728 GCATGCATGCGTGATTTGGATA 60.288 45.455 37.79 6.23 44.67 2.59
2552 2663 1.537348 GCATGCATGCGTGATTTGGAT 60.537 47.619 37.79 9.73 44.67 3.41
2553 2664 0.179132 GCATGCATGCGTGATTTGGA 60.179 50.000 37.79 7.59 44.67 3.53
2554 2665 2.293765 GCATGCATGCGTGATTTGG 58.706 52.632 37.79 15.26 44.67 3.28
2565 2676 3.828921 AGGAGATACAACATGCATGCAT 58.171 40.909 27.46 27.46 37.08 3.96
2566 2677 3.286329 AGGAGATACAACATGCATGCA 57.714 42.857 26.53 25.04 0.00 3.96
2567 2678 7.173907 AGTTTATAGGAGATACAACATGCATGC 59.826 37.037 26.53 11.82 0.00 4.06
2568 2679 8.613060 AGTTTATAGGAGATACAACATGCATG 57.387 34.615 25.09 25.09 0.00 4.06
2569 2680 9.632638 AAAGTTTATAGGAGATACAACATGCAT 57.367 29.630 0.00 0.00 0.00 3.96
2570 2681 9.461312 AAAAGTTTATAGGAGATACAACATGCA 57.539 29.630 0.00 0.00 0.00 3.96
2608 2719 7.482169 TGAACATAACACAGAGACCTTATCT 57.518 36.000 0.00 0.00 41.91 1.98
2609 2720 7.819900 ACTTGAACATAACACAGAGACCTTATC 59.180 37.037 0.00 0.00 0.00 1.75
2610 2721 7.680730 ACTTGAACATAACACAGAGACCTTAT 58.319 34.615 0.00 0.00 0.00 1.73
2611 2722 7.062749 ACTTGAACATAACACAGAGACCTTA 57.937 36.000 0.00 0.00 0.00 2.69
2612 2723 5.930135 ACTTGAACATAACACAGAGACCTT 58.070 37.500 0.00 0.00 0.00 3.50
2613 2724 5.552870 ACTTGAACATAACACAGAGACCT 57.447 39.130 0.00 0.00 0.00 3.85
2614 2725 5.992217 AGAACTTGAACATAACACAGAGACC 59.008 40.000 0.00 0.00 0.00 3.85
2615 2726 6.480320 ACAGAACTTGAACATAACACAGAGAC 59.520 38.462 0.00 0.00 0.00 3.36
2616 2727 6.582636 ACAGAACTTGAACATAACACAGAGA 58.417 36.000 0.00 0.00 0.00 3.10
2617 2728 6.851222 ACAGAACTTGAACATAACACAGAG 57.149 37.500 0.00 0.00 0.00 3.35
2618 2729 8.201464 TCTTACAGAACTTGAACATAACACAGA 58.799 33.333 0.00 0.00 0.00 3.41
2619 2730 8.365399 TCTTACAGAACTTGAACATAACACAG 57.635 34.615 0.00 0.00 0.00 3.66
2620 2731 7.985184 ACTCTTACAGAACTTGAACATAACACA 59.015 33.333 0.00 0.00 0.00 3.72
2621 2732 8.366671 ACTCTTACAGAACTTGAACATAACAC 57.633 34.615 0.00 0.00 0.00 3.32
2625 2736 9.653287 CCAATACTCTTACAGAACTTGAACATA 57.347 33.333 0.00 0.00 0.00 2.29
2626 2737 8.375506 TCCAATACTCTTACAGAACTTGAACAT 58.624 33.333 0.00 0.00 0.00 2.71
2627 2738 7.732025 TCCAATACTCTTACAGAACTTGAACA 58.268 34.615 0.00 0.00 0.00 3.18
2628 2739 8.088981 TCTCCAATACTCTTACAGAACTTGAAC 58.911 37.037 0.00 0.00 0.00 3.18
2629 2740 8.190326 TCTCCAATACTCTTACAGAACTTGAA 57.810 34.615 0.00 0.00 0.00 2.69
2630 2741 7.093727 CCTCTCCAATACTCTTACAGAACTTGA 60.094 40.741 0.00 0.00 0.00 3.02
2631 2742 7.038659 CCTCTCCAATACTCTTACAGAACTTG 58.961 42.308 0.00 0.00 0.00 3.16
2632 2743 6.155393 CCCTCTCCAATACTCTTACAGAACTT 59.845 42.308 0.00 0.00 0.00 2.66
2633 2744 5.659079 CCCTCTCCAATACTCTTACAGAACT 59.341 44.000 0.00 0.00 0.00 3.01
2634 2745 5.422650 ACCCTCTCCAATACTCTTACAGAAC 59.577 44.000 0.00 0.00 0.00 3.01
2635 2746 5.590818 ACCCTCTCCAATACTCTTACAGAA 58.409 41.667 0.00 0.00 0.00 3.02
2636 2747 5.208294 ACCCTCTCCAATACTCTTACAGA 57.792 43.478 0.00 0.00 0.00 3.41
2637 2748 5.163395 GGAACCCTCTCCAATACTCTTACAG 60.163 48.000 0.00 0.00 35.36 2.74
2638 2749 4.715297 GGAACCCTCTCCAATACTCTTACA 59.285 45.833 0.00 0.00 35.36 2.41
2639 2750 5.279255 GGAACCCTCTCCAATACTCTTAC 57.721 47.826 0.00 0.00 35.36 2.34
2697 2808 2.000447 GCAACACTGACGGATAAGGTC 59.000 52.381 0.00 0.00 34.99 3.85
2700 2811 3.684305 TGAATGCAACACTGACGGATAAG 59.316 43.478 0.00 0.00 0.00 1.73
2747 2858 4.591072 TGAAATGGTTTCCCGGAAAAGAAT 59.409 37.500 14.36 5.89 38.90 2.40
2755 2866 1.812571 CTGACTGAAATGGTTTCCCGG 59.187 52.381 0.00 0.00 38.90 5.73
2785 2896 4.035675 GCAAGATCCTTTTACAGGGAATCG 59.964 45.833 0.00 0.00 44.12 3.34
2918 3029 0.033228 GCCAGATCCTGACTCCATCG 59.967 60.000 0.00 0.00 32.44 3.84
2919 3030 1.126488 TGCCAGATCCTGACTCCATC 58.874 55.000 0.00 0.00 32.44 3.51
2928 3039 1.414181 CTATCACCGTTGCCAGATCCT 59.586 52.381 0.00 0.00 0.00 3.24
2949 3060 4.530710 AAGCATAGTACGTTGAACCTCA 57.469 40.909 0.00 0.00 0.00 3.86
2958 3069 5.578005 TCAGAAGCTTAAGCATAGTACGT 57.422 39.130 28.39 2.88 45.16 3.57
2971 3082 3.005155 GCATCAAGTTGGTTCAGAAGCTT 59.995 43.478 13.45 0.00 0.00 3.74
2993 3104 8.216453 CCTTAATTTTGTTCGATGCTTCAAAAG 58.784 33.333 13.64 3.60 41.04 2.27
3033 3144 7.550906 GCTTGGTCCAATATGTCTATCCTATTC 59.449 40.741 4.34 0.00 0.00 1.75
3054 3165 0.392729 CAGGCCTCAGAAGAGCTTGG 60.393 60.000 0.00 0.00 40.68 3.61
3147 3262 8.077991 GCACTGATATGAGCAAGCAATATTAAA 58.922 33.333 0.00 0.00 0.00 1.52
3177 3292 9.267084 GGGACTGAAAGAATAGATAATTCAGAC 57.733 37.037 17.75 12.43 46.16 3.51
3207 3322 9.565090 TCCTCGAATGAATCTTCAAAATATCAT 57.435 29.630 0.00 0.00 41.13 2.45
3322 3437 7.744087 ATTTTAGATGCTCGTTATAATGGCA 57.256 32.000 17.58 17.58 37.32 4.92
3379 3499 9.926751 CTTATTAGCACTGTACAATTCAGAATG 57.073 33.333 0.00 0.00 36.81 2.67
3427 3548 7.770433 TGCAGCAGATTATAGATGTTTTGTAGT 59.230 33.333 0.00 0.00 0.00 2.73
3461 3584 4.532126 TGGATTTCTTCAGAAGCTACAGGA 59.468 41.667 5.15 0.00 35.21 3.86
3463 3586 4.874966 CCTGGATTTCTTCAGAAGCTACAG 59.125 45.833 5.15 8.47 35.21 2.74
3468 3591 1.747924 GGCCTGGATTTCTTCAGAAGC 59.252 52.381 5.15 0.00 35.21 3.86
3472 3595 1.005215 ACTGGGCCTGGATTTCTTCAG 59.995 52.381 15.36 0.00 0.00 3.02
3475 3598 1.928868 CAACTGGGCCTGGATTTCTT 58.071 50.000 15.36 0.00 0.00 2.52
3492 3615 5.489792 TTTAGCATGGGTAAAAATGGCAA 57.510 34.783 0.00 0.00 33.48 4.52
3494 3617 5.220835 GCATTTTAGCATGGGTAAAAATGGC 60.221 40.000 14.79 14.25 44.62 4.40
3517 3641 2.945668 CAACTGGGCCTGAGTTTATAGC 59.054 50.000 18.12 0.00 31.05 2.97
3522 3646 4.181051 GCAACTGGGCCTGAGTTT 57.819 55.556 18.12 0.00 31.05 2.66
3544 3668 3.764237 TGGCGTCTAGAAGGTCTTTTT 57.236 42.857 7.81 0.00 0.00 1.94
3545 3669 3.181458 TGTTGGCGTCTAGAAGGTCTTTT 60.181 43.478 7.81 0.00 0.00 2.27
3546 3670 2.367567 TGTTGGCGTCTAGAAGGTCTTT 59.632 45.455 7.81 0.00 0.00 2.52
3547 3671 1.968493 TGTTGGCGTCTAGAAGGTCTT 59.032 47.619 7.81 0.00 0.00 3.01
3548 3672 1.546476 CTGTTGGCGTCTAGAAGGTCT 59.454 52.381 7.81 0.00 0.00 3.85
3549 3673 1.997669 CTGTTGGCGTCTAGAAGGTC 58.002 55.000 7.81 0.00 0.00 3.85
3550 3674 0.037232 GCTGTTGGCGTCTAGAAGGT 60.037 55.000 7.81 0.00 0.00 3.50
3551 3675 0.037326 TGCTGTTGGCGTCTAGAAGG 60.037 55.000 7.81 0.00 45.43 3.46
3552 3676 1.461127 GTTGCTGTTGGCGTCTAGAAG 59.539 52.381 0.74 0.74 45.43 2.85
3553 3677 1.202592 TGTTGCTGTTGGCGTCTAGAA 60.203 47.619 0.00 0.00 45.43 2.10
3554 3678 0.391228 TGTTGCTGTTGGCGTCTAGA 59.609 50.000 0.00 0.00 45.43 2.43
3555 3679 1.195448 CTTGTTGCTGTTGGCGTCTAG 59.805 52.381 0.00 0.00 45.43 2.43
3556 3680 1.202592 TCTTGTTGCTGTTGGCGTCTA 60.203 47.619 0.00 0.00 45.43 2.59
3557 3681 0.463654 TCTTGTTGCTGTTGGCGTCT 60.464 50.000 0.00 0.00 45.43 4.18
3558 3682 0.380378 TTCTTGTTGCTGTTGGCGTC 59.620 50.000 0.00 0.00 45.43 5.19
3559 3683 1.032014 ATTCTTGTTGCTGTTGGCGT 58.968 45.000 0.00 0.00 45.43 5.68
3560 3684 2.138596 AATTCTTGTTGCTGTTGGCG 57.861 45.000 0.00 0.00 45.43 5.69
3561 3685 3.740832 GGTAAATTCTTGTTGCTGTTGGC 59.259 43.478 0.00 0.00 42.22 4.52
3562 3686 4.202202 TGGGTAAATTCTTGTTGCTGTTGG 60.202 41.667 0.00 0.00 0.00 3.77
3563 3687 4.942852 TGGGTAAATTCTTGTTGCTGTTG 58.057 39.130 0.00 0.00 0.00 3.33
3564 3688 5.806654 ATGGGTAAATTCTTGTTGCTGTT 57.193 34.783 0.00 0.00 0.00 3.16
3565 3689 6.437162 ACATATGGGTAAATTCTTGTTGCTGT 59.563 34.615 7.80 0.00 0.00 4.40
3566 3690 6.866480 ACATATGGGTAAATTCTTGTTGCTG 58.134 36.000 7.80 0.00 0.00 4.41
3567 3691 6.891908 AGACATATGGGTAAATTCTTGTTGCT 59.108 34.615 7.80 0.00 0.00 3.91
3568 3692 6.974622 CAGACATATGGGTAAATTCTTGTTGC 59.025 38.462 7.80 0.00 0.00 4.17
3569 3693 8.055279 ACAGACATATGGGTAAATTCTTGTTG 57.945 34.615 7.80 0.00 0.00 3.33
3570 3694 8.522830 CAACAGACATATGGGTAAATTCTTGTT 58.477 33.333 7.80 4.18 0.00 2.83
3571 3695 7.122650 CCAACAGACATATGGGTAAATTCTTGT 59.877 37.037 7.80 0.00 0.00 3.16
3572 3696 7.122650 ACCAACAGACATATGGGTAAATTCTTG 59.877 37.037 7.80 0.00 38.58 3.02
3573 3697 7.182060 ACCAACAGACATATGGGTAAATTCTT 58.818 34.615 7.80 0.00 38.58 2.52
3574 3698 6.731467 ACCAACAGACATATGGGTAAATTCT 58.269 36.000 7.80 0.00 38.58 2.40
3575 3699 7.404671 AACCAACAGACATATGGGTAAATTC 57.595 36.000 7.80 0.00 38.58 2.17
3576 3700 9.487442 AATAACCAACAGACATATGGGTAAATT 57.513 29.630 7.80 4.91 39.69 1.82
3577 3701 8.912988 CAATAACCAACAGACATATGGGTAAAT 58.087 33.333 7.80 0.00 39.69 1.40
3578 3702 7.891183 ACAATAACCAACAGACATATGGGTAAA 59.109 33.333 7.80 0.00 39.69 2.01
3579 3703 7.406916 ACAATAACCAACAGACATATGGGTAA 58.593 34.615 7.80 0.00 39.69 2.85
3580 3704 6.964464 ACAATAACCAACAGACATATGGGTA 58.036 36.000 7.80 0.00 40.50 3.69
3581 3705 5.826643 ACAATAACCAACAGACATATGGGT 58.173 37.500 7.80 0.29 38.58 4.51
3582 3706 6.405731 CCAACAATAACCAACAGACATATGGG 60.406 42.308 7.80 0.00 38.58 4.00
3583 3707 6.152661 ACCAACAATAACCAACAGACATATGG 59.847 38.462 7.80 0.00 40.16 2.74
3584 3708 7.156876 ACCAACAATAACCAACAGACATATG 57.843 36.000 0.00 0.00 0.00 1.78
3585 3709 7.775053 AACCAACAATAACCAACAGACATAT 57.225 32.000 0.00 0.00 0.00 1.78
3586 3710 7.589958 AAACCAACAATAACCAACAGACATA 57.410 32.000 0.00 0.00 0.00 2.29
3587 3711 6.478512 AAACCAACAATAACCAACAGACAT 57.521 33.333 0.00 0.00 0.00 3.06
3588 3712 5.923733 AAACCAACAATAACCAACAGACA 57.076 34.783 0.00 0.00 0.00 3.41
3589 3713 8.880878 AAATAAACCAACAATAACCAACAGAC 57.119 30.769 0.00 0.00 0.00 3.51
3590 3714 9.319143 CAAAATAAACCAACAATAACCAACAGA 57.681 29.630 0.00 0.00 0.00 3.41
3591 3715 9.103861 ACAAAATAAACCAACAATAACCAACAG 57.896 29.630 0.00 0.00 0.00 3.16
3592 3716 9.449719 AACAAAATAAACCAACAATAACCAACA 57.550 25.926 0.00 0.00 0.00 3.33
3593 3717 9.709600 CAACAAAATAAACCAACAATAACCAAC 57.290 29.630 0.00 0.00 0.00 3.77
3594 3718 9.449719 ACAACAAAATAAACCAACAATAACCAA 57.550 25.926 0.00 0.00 0.00 3.67
3595 3719 9.449719 AACAACAAAATAAACCAACAATAACCA 57.550 25.926 0.00 0.00 0.00 3.67
3596 3720 9.923786 GAACAACAAAATAAACCAACAATAACC 57.076 29.630 0.00 0.00 0.00 2.85
3597 3721 9.923786 GGAACAACAAAATAAACCAACAATAAC 57.076 29.630 0.00 0.00 0.00 1.89
3598 3722 9.892130 AGGAACAACAAAATAAACCAACAATAA 57.108 25.926 0.00 0.00 0.00 1.40
3600 3724 9.320352 GTAGGAACAACAAAATAAACCAACAAT 57.680 29.630 0.00 0.00 0.00 2.71
3601 3725 8.311836 TGTAGGAACAACAAAATAAACCAACAA 58.688 29.630 0.00 0.00 30.91 2.83
3602 3726 7.760340 GTGTAGGAACAACAAAATAAACCAACA 59.240 33.333 0.00 0.00 37.36 3.33
3603 3727 7.977293 AGTGTAGGAACAACAAAATAAACCAAC 59.023 33.333 0.00 0.00 37.36 3.77
3604 3728 8.068892 AGTGTAGGAACAACAAAATAAACCAA 57.931 30.769 0.00 0.00 37.36 3.67
3605 3729 7.648039 AGTGTAGGAACAACAAAATAAACCA 57.352 32.000 0.00 0.00 37.36 3.67
3606 3730 8.936070 AAAGTGTAGGAACAACAAAATAAACC 57.064 30.769 0.00 0.00 37.36 3.27
3607 3731 9.797556 AGAAAGTGTAGGAACAACAAAATAAAC 57.202 29.630 0.00 0.00 37.36 2.01
3614 3738 9.796120 CAATAAAAGAAAGTGTAGGAACAACAA 57.204 29.630 0.00 0.00 37.36 2.83
3615 3739 8.962679 ACAATAAAAGAAAGTGTAGGAACAACA 58.037 29.630 0.00 0.00 37.36 3.33
3616 3740 9.797556 AACAATAAAAGAAAGTGTAGGAACAAC 57.202 29.630 0.00 0.00 37.36 3.32
3618 3742 8.626526 GGAACAATAAAAGAAAGTGTAGGAACA 58.373 33.333 0.00 0.00 0.00 3.18
3619 3743 8.847196 AGGAACAATAAAAGAAAGTGTAGGAAC 58.153 33.333 0.00 0.00 0.00 3.62
3620 3744 8.990163 AGGAACAATAAAAGAAAGTGTAGGAA 57.010 30.769 0.00 0.00 0.00 3.36
3621 3745 9.498176 GTAGGAACAATAAAAGAAAGTGTAGGA 57.502 33.333 0.00 0.00 0.00 2.94
3622 3746 9.280174 TGTAGGAACAATAAAAGAAAGTGTAGG 57.720 33.333 0.00 0.00 30.91 3.18
3624 3748 9.841295 AGTGTAGGAACAATAAAAGAAAGTGTA 57.159 29.630 0.00 0.00 37.36 2.90
3625 3749 8.747538 AGTGTAGGAACAATAAAAGAAAGTGT 57.252 30.769 0.00 0.00 37.36 3.55
3626 3750 9.450807 CAAGTGTAGGAACAATAAAAGAAAGTG 57.549 33.333 0.00 0.00 37.36 3.16
3627 3751 9.403583 TCAAGTGTAGGAACAATAAAAGAAAGT 57.596 29.630 0.00 0.00 37.36 2.66
3630 3754 9.403583 AGTTCAAGTGTAGGAACAATAAAAGAA 57.596 29.630 7.20 0.00 44.46 2.52
3631 3755 8.974060 AGTTCAAGTGTAGGAACAATAAAAGA 57.026 30.769 7.20 0.00 44.46 2.52
3633 3757 8.780249 GCTAGTTCAAGTGTAGGAACAATAAAA 58.220 33.333 7.20 0.00 44.46 1.52
3634 3758 8.154856 AGCTAGTTCAAGTGTAGGAACAATAAA 58.845 33.333 7.20 0.00 44.46 1.40
3635 3759 7.676947 AGCTAGTTCAAGTGTAGGAACAATAA 58.323 34.615 7.20 0.00 44.46 1.40
3636 3760 7.241042 AGCTAGTTCAAGTGTAGGAACAATA 57.759 36.000 7.20 0.00 44.46 1.90
3637 3761 6.115448 AGCTAGTTCAAGTGTAGGAACAAT 57.885 37.500 7.20 0.00 44.46 2.71
3638 3762 5.546621 AGCTAGTTCAAGTGTAGGAACAA 57.453 39.130 7.20 0.00 44.46 2.83
3639 3763 5.336531 GCTAGCTAGTTCAAGTGTAGGAACA 60.337 44.000 21.62 0.00 44.46 3.18
3640 3764 5.103687 GCTAGCTAGTTCAAGTGTAGGAAC 58.896 45.833 21.62 0.00 42.82 3.62
3641 3765 5.017490 AGCTAGCTAGTTCAAGTGTAGGAA 58.983 41.667 17.69 0.00 0.00 3.36
3642 3766 4.601084 AGCTAGCTAGTTCAAGTGTAGGA 58.399 43.478 17.69 0.00 0.00 2.94
3643 3767 4.993029 AGCTAGCTAGTTCAAGTGTAGG 57.007 45.455 17.69 0.00 0.00 3.18
3644 3768 5.591067 ACCTAGCTAGCTAGTTCAAGTGTAG 59.409 44.000 37.50 24.93 43.22 2.74
3645 3769 5.507637 ACCTAGCTAGCTAGTTCAAGTGTA 58.492 41.667 37.50 12.16 43.22 2.90
3646 3770 4.345854 ACCTAGCTAGCTAGTTCAAGTGT 58.654 43.478 37.50 27.14 43.22 3.55
3647 3771 4.993029 ACCTAGCTAGCTAGTTCAAGTG 57.007 45.455 37.50 26.61 43.22 3.16
3648 3772 4.581409 GCTACCTAGCTAGCTAGTTCAAGT 59.419 45.833 37.50 30.68 45.62 3.16
3649 3773 5.116069 GCTACCTAGCTAGCTAGTTCAAG 57.884 47.826 37.50 29.38 45.62 3.02
3663 3787 3.118738 ACATTTCACGGGAAGCTACCTAG 60.119 47.826 0.00 0.00 33.82 3.02
3664 3788 2.835764 ACATTTCACGGGAAGCTACCTA 59.164 45.455 0.00 0.00 33.82 3.08
3665 3789 1.628846 ACATTTCACGGGAAGCTACCT 59.371 47.619 0.00 0.00 33.82 3.08
3666 3790 2.109425 ACATTTCACGGGAAGCTACC 57.891 50.000 0.00 0.00 33.82 3.18
3667 3791 3.071479 TGAACATTTCACGGGAAGCTAC 58.929 45.455 0.00 0.00 34.08 3.58
3668 3792 3.410631 TGAACATTTCACGGGAAGCTA 57.589 42.857 0.00 0.00 34.08 3.32
3669 3793 2.270352 TGAACATTTCACGGGAAGCT 57.730 45.000 0.00 0.00 34.08 3.74
3677 3801 7.095857 CTCTGAGTGAGTAAGTGAACATTTCAC 60.096 40.741 10.48 10.48 46.56 3.18
3678 3802 6.816136 TCTGAGTGAGTAAGTGAACATTTCA 58.184 36.000 0.00 0.00 37.33 2.69
3679 3803 6.128688 GCTCTGAGTGAGTAAGTGAACATTTC 60.129 42.308 6.53 0.00 44.41 2.17
3680 3804 5.698545 GCTCTGAGTGAGTAAGTGAACATTT 59.301 40.000 6.53 0.00 44.41 2.32
3681 3805 5.221521 TGCTCTGAGTGAGTAAGTGAACATT 60.222 40.000 6.53 0.00 44.41 2.71
3682 3806 4.281941 TGCTCTGAGTGAGTAAGTGAACAT 59.718 41.667 6.53 0.00 44.41 2.71
3683 3807 3.636764 TGCTCTGAGTGAGTAAGTGAACA 59.363 43.478 6.53 0.00 44.41 3.18
3684 3808 4.233789 CTGCTCTGAGTGAGTAAGTGAAC 58.766 47.826 6.53 0.00 44.41 3.18
3685 3809 3.256879 CCTGCTCTGAGTGAGTAAGTGAA 59.743 47.826 6.53 0.00 44.41 3.18
3686 3810 2.822561 CCTGCTCTGAGTGAGTAAGTGA 59.177 50.000 6.53 0.00 44.41 3.41
3687 3811 2.560542 ACCTGCTCTGAGTGAGTAAGTG 59.439 50.000 6.53 0.00 44.41 3.16
3688 3812 2.883026 ACCTGCTCTGAGTGAGTAAGT 58.117 47.619 6.53 0.00 44.41 2.24
3689 3813 3.951775 AACCTGCTCTGAGTGAGTAAG 57.048 47.619 6.53 0.00 44.41 2.34
3690 3814 4.663334 TCTAACCTGCTCTGAGTGAGTAA 58.337 43.478 6.53 0.00 44.41 2.24
3691 3815 4.265893 CTCTAACCTGCTCTGAGTGAGTA 58.734 47.826 6.53 0.00 44.41 2.59
3692 3816 3.088532 CTCTAACCTGCTCTGAGTGAGT 58.911 50.000 6.53 0.00 44.41 3.41
3693 3817 2.159254 GCTCTAACCTGCTCTGAGTGAG 60.159 54.545 6.53 3.00 45.33 3.51
3694 3818 1.821753 GCTCTAACCTGCTCTGAGTGA 59.178 52.381 6.53 0.00 0.00 3.41
3695 3819 1.547820 TGCTCTAACCTGCTCTGAGTG 59.452 52.381 6.53 0.02 0.00 3.51
3696 3820 1.930251 TGCTCTAACCTGCTCTGAGT 58.070 50.000 6.53 0.00 0.00 3.41
3697 3821 2.694628 AGATGCTCTAACCTGCTCTGAG 59.305 50.000 0.00 0.00 0.00 3.35
3698 3822 2.692557 GAGATGCTCTAACCTGCTCTGA 59.307 50.000 0.00 0.00 0.00 3.27
3699 3823 2.224018 GGAGATGCTCTAACCTGCTCTG 60.224 54.545 0.00 0.00 0.00 3.35
3700 3824 2.038659 GGAGATGCTCTAACCTGCTCT 58.961 52.381 0.00 0.00 0.00 4.09
3701 3825 1.759445 TGGAGATGCTCTAACCTGCTC 59.241 52.381 0.00 0.00 0.00 4.26
3702 3826 1.761784 CTGGAGATGCTCTAACCTGCT 59.238 52.381 0.00 0.00 0.00 4.24
3703 3827 1.809651 GCTGGAGATGCTCTAACCTGC 60.810 57.143 0.00 0.00 38.10 4.85
3704 3828 1.202627 GGCTGGAGATGCTCTAACCTG 60.203 57.143 0.00 0.00 0.00 4.00
3705 3829 1.127343 GGCTGGAGATGCTCTAACCT 58.873 55.000 0.00 0.00 0.00 3.50
3706 3830 0.249657 CGGCTGGAGATGCTCTAACC 60.250 60.000 0.00 0.00 0.00 2.85
3749 3876 2.031683 GCGCATTGACTAAACCGCTATT 59.968 45.455 0.30 0.00 36.81 1.73
3847 3981 3.305744 GGCAGCGGGAAAAGACAAATTTA 60.306 43.478 0.00 0.00 0.00 1.40
3851 3985 0.753479 TGGCAGCGGGAAAAGACAAA 60.753 50.000 0.00 0.00 0.00 2.83
4050 4250 2.980233 AAGCACAGAAGCCACGCC 60.980 61.111 0.00 0.00 34.23 5.68
4051 4251 2.253452 CAAGCACAGAAGCCACGC 59.747 61.111 0.00 0.00 34.23 5.34
4052 4252 2.620112 CCCAAGCACAGAAGCCACG 61.620 63.158 0.00 0.00 34.23 4.94
4055 4255 2.282745 AGCCCAAGCACAGAAGCC 60.283 61.111 0.00 0.00 43.56 4.35
4057 4257 1.584380 GAGCAGCCCAAGCACAGAAG 61.584 60.000 0.00 0.00 43.56 2.85
4058 4258 1.601759 GAGCAGCCCAAGCACAGAA 60.602 57.895 0.00 0.00 43.56 3.02
4080 4304 3.414700 CACAGAAGCCACGCCGAC 61.415 66.667 0.00 0.00 0.00 4.79
4085 4309 1.811266 CCCGATCACAGAAGCCACG 60.811 63.158 0.00 0.00 0.00 4.94
4212 4653 1.226802 CGATGGACGAGCAGGTCAG 60.227 63.158 9.05 0.00 45.77 3.51
4246 4687 1.339055 CCGACCTGGCTTTCTTGATGA 60.339 52.381 0.00 0.00 0.00 2.92
4497 5017 0.896940 AGGAGACGTACAAGCCGGAA 60.897 55.000 5.05 0.00 0.00 4.30
4636 5162 0.459585 TCGGCTGCGTAGATGGTTTC 60.460 55.000 4.08 0.00 0.00 2.78
4888 5424 0.745486 CTGGATGCGCATCAAGTGGA 60.745 55.000 41.80 21.62 39.54 4.02
4911 5447 0.949105 GCGAACCAGAACACCGACAT 60.949 55.000 0.00 0.00 0.00 3.06
5042 5583 2.038837 CCGGCGAGGAAAGGGAAAC 61.039 63.158 9.30 0.00 45.00 2.78
5115 5720 1.072332 CACAATGGACACCACCGGA 59.928 57.895 9.46 0.00 35.80 5.14
5156 5788 1.067669 ACATGGACGAGATCATCACGG 59.932 52.381 9.40 0.00 34.82 4.94
5194 5826 0.533085 TCGTCACATTTCGGCAACCA 60.533 50.000 0.00 0.00 0.00 3.67
5300 5934 2.475466 TTCGCCGGCCTCTAGTACG 61.475 63.158 23.46 2.86 0.00 3.67
5367 6005 1.675310 CTTTCCACATGGCCAGCGA 60.675 57.895 13.05 0.00 34.44 4.93
5675 6403 2.358125 CACCCGGCATGTCGAACA 60.358 61.111 23.62 0.00 0.00 3.18
6388 7165 1.134280 CACAGCCTCCACTAATCAGGG 60.134 57.143 0.00 0.00 0.00 4.45
6392 7169 1.339055 TGTGCACAGCCTCCACTAATC 60.339 52.381 17.42 0.00 0.00 1.75
6565 11355 0.815615 CCATCCTCGGCCAGCTTTAC 60.816 60.000 2.24 0.00 0.00 2.01
6596 11391 0.039798 ACACCACTACTACGTGCGTG 60.040 55.000 7.55 0.00 39.65 5.34
6611 11440 1.353022 TCCCCACCAAATCAGTACACC 59.647 52.381 0.00 0.00 0.00 4.16
6689 11522 3.999705 TTGCATGGCCCCCAATCCC 63.000 63.158 0.00 0.00 36.95 3.85
6799 11653 3.702048 TGGTGGTAGCTGGCGTCC 61.702 66.667 0.00 0.00 0.00 4.79
6836 11693 1.827399 AATTGTCCCGTGGAGCGACT 61.827 55.000 0.00 0.00 44.77 4.18
6913 12983 2.973694 TGAAGTGCCCTACGGAATAC 57.026 50.000 0.00 0.00 0.00 1.89
6934 13004 8.650490 CAGCCCCATTCCAGTTTTAAAATATAT 58.350 33.333 3.52 0.00 0.00 0.86
6957 13027 0.675633 TGAAAAGGCAAAGCTCCAGC 59.324 50.000 0.00 0.00 42.49 4.85
6960 13030 3.665745 TCAATGAAAAGGCAAAGCTCC 57.334 42.857 0.00 0.00 0.00 4.70
6962 13032 7.444299 TCTTTAATCAATGAAAAGGCAAAGCT 58.556 30.769 7.36 0.00 32.33 3.74
6963 13033 7.599998 TCTCTTTAATCAATGAAAAGGCAAAGC 59.400 33.333 7.36 0.00 32.33 3.51
6964 13034 9.480053 TTCTCTTTAATCAATGAAAAGGCAAAG 57.520 29.630 7.36 2.89 32.33 2.77
6966 13036 8.090214 CCTTCTCTTTAATCAATGAAAAGGCAA 58.910 33.333 7.36 1.79 32.40 4.52
6967 13037 7.451255 TCCTTCTCTTTAATCAATGAAAAGGCA 59.549 33.333 7.36 0.00 36.59 4.75
7176 15221 3.519107 TCACCCATTAGCTGTGATTCTCA 59.481 43.478 0.00 0.00 34.28 3.27
7229 15277 6.127196 GGTAGAATATTGGGATGGTTTTTGCA 60.127 38.462 0.00 0.00 0.00 4.08
7232 15280 6.957020 TGTGGTAGAATATTGGGATGGTTTTT 59.043 34.615 0.00 0.00 0.00 1.94
7250 15299 3.580022 TGGATCAGATGGCTATGTGGTAG 59.420 47.826 7.37 0.00 0.00 3.18
7264 15313 6.611613 CCTATTTACTAGGCATGGATCAGA 57.388 41.667 0.00 0.00 40.75 3.27
7310 15359 6.183360 TGCTCTTTGAATGTCGATATTCCAAC 60.183 38.462 26.10 13.65 36.46 3.77
7351 15401 1.673665 CTCTGCAAAGCCGCTTCCT 60.674 57.895 5.98 0.00 0.00 3.36
7378 15428 0.912486 AGAATAGCCTCGCCAACCTT 59.088 50.000 0.00 0.00 0.00 3.50
7386 15436 5.837437 ACTTGTGATAAGAGAATAGCCTCG 58.163 41.667 0.00 0.00 38.19 4.63
7395 15445 3.830178 TCGGGTCAACTTGTGATAAGAGA 59.170 43.478 0.00 0.00 38.90 3.10
7410 15460 0.474614 TGGTTTTGGATGTCGGGTCA 59.525 50.000 0.00 0.00 0.00 4.02
7427 15477 1.876497 CGGTGTGCCCTTTGGAATGG 61.876 60.000 0.00 0.00 0.00 3.16
7428 15478 1.178534 ACGGTGTGCCCTTTGGAATG 61.179 55.000 0.00 0.00 0.00 2.67
7487 15542 7.614192 TGTAAAGTACACATCATCTCAGGTAGA 59.386 37.037 0.00 0.00 34.26 2.59
7488 15543 7.772166 TGTAAAGTACACATCATCTCAGGTAG 58.228 38.462 0.00 0.00 32.89 3.18
7540 15614 5.818678 TTCCACTGTTTTAGAGGCTAGAA 57.181 39.130 0.00 0.00 37.11 2.10
7575 15649 4.422073 AAGATCGGACAAGAATATGCCA 57.578 40.909 0.00 0.00 0.00 4.92
7577 15651 8.029522 TCATACTAAGATCGGACAAGAATATGC 58.970 37.037 0.00 0.00 0.00 3.14
7619 15775 4.329831 GCCCAAAGCCCGTCATAA 57.670 55.556 0.00 0.00 34.35 1.90
7659 15815 1.257936 GTACGCCATGTGATAGCAACG 59.742 52.381 0.00 0.00 0.00 4.10
7664 15820 2.485266 TCACGTACGCCATGTGATAG 57.515 50.000 16.72 0.00 46.12 2.08
7674 15830 1.077645 TACGGCCAATTCACGTACGC 61.078 55.000 16.72 0.00 41.53 4.42
7697 15853 1.198637 AGAGCTGTTGTACGTACGACC 59.801 52.381 33.11 22.65 39.36 4.79
7698 15854 2.503871 GAGAGCTGTTGTACGTACGAC 58.496 52.381 30.99 30.99 40.29 4.34
7701 15857 4.691860 TTAGGAGAGCTGTTGTACGTAC 57.308 45.455 18.90 18.90 0.00 3.67
7703 15859 3.611057 CGTTTAGGAGAGCTGTTGTACGT 60.611 47.826 0.00 0.00 0.00 3.57
7708 15864 3.807622 TGAAACGTTTAGGAGAGCTGTTG 59.192 43.478 14.65 0.00 0.00 3.33
7710 15866 3.746045 TGAAACGTTTAGGAGAGCTGT 57.254 42.857 14.65 0.00 0.00 4.40
7790 15949 2.874701 AGTTGTGTCTTGTGTGCTCATC 59.125 45.455 0.00 0.00 0.00 2.92
7808 16238 7.283329 ACTTTAAGAGGTCAACAATCAGAGTT 58.717 34.615 0.00 0.00 0.00 3.01
7867 16297 6.015095 AGCTCCTTCCCTTTGTTTCAATTTAG 60.015 38.462 0.00 0.00 0.00 1.85
7872 16302 3.117512 AGAGCTCCTTCCCTTTGTTTCAA 60.118 43.478 10.93 0.00 0.00 2.69
7926 16356 0.984230 TACTTGGGGTCTCTGCCAAG 59.016 55.000 0.85 0.85 43.41 3.61
7940 16370 9.801873 TTTTCTGATTTGACCTCTTTTTACTTG 57.198 29.630 0.00 0.00 0.00 3.16
7953 16384 5.774498 ACCTGTCCTTTTTCTGATTTGAC 57.226 39.130 0.00 0.00 0.00 3.18
7988 16419 1.532505 CGAGATTGGCTCATTTTGCGG 60.533 52.381 0.00 0.00 44.15 5.69
8033 16479 4.320456 ACCAGTGCCCTCTGTGCG 62.320 66.667 0.00 0.00 34.02 5.34
8099 16545 0.179215 GCCTTTGCGATTCTCGTGTG 60.179 55.000 0.00 0.00 42.81 3.82
8103 16549 1.709147 CCTGGCCTTTGCGATTCTCG 61.709 60.000 3.32 0.00 43.89 4.04
8168 16620 6.430925 TGCTAACCTATTTGCATGTATGGATC 59.569 38.462 0.00 0.00 40.88 3.36
8196 16648 2.037772 AGGTATGGATCGATCAGGTTGC 59.962 50.000 25.93 8.76 0.00 4.17
8199 16651 1.620819 GCAGGTATGGATCGATCAGGT 59.379 52.381 25.93 13.50 0.00 4.00
8200 16652 1.620323 TGCAGGTATGGATCGATCAGG 59.380 52.381 25.93 8.39 0.00 3.86
8202 16654 3.836365 TTTGCAGGTATGGATCGATCA 57.164 42.857 25.93 13.02 0.00 2.92
8203 16655 4.872691 CCTATTTGCAGGTATGGATCGATC 59.127 45.833 17.36 17.36 0.00 3.69
8204 16656 4.836825 CCTATTTGCAGGTATGGATCGAT 58.163 43.478 0.00 0.00 0.00 3.59
8205 16657 4.271696 CCTATTTGCAGGTATGGATCGA 57.728 45.455 0.00 0.00 0.00 3.59
8233 16685 4.748892 CAAGTATATGGATCAGGTAGCGG 58.251 47.826 0.00 0.00 0.00 5.52
8317 16770 8.267183 CCAATCTTTTATTCCAGCCCTAAAAAT 58.733 33.333 0.00 0.00 0.00 1.82
8321 16774 5.656416 CACCAATCTTTTATTCCAGCCCTAA 59.344 40.000 0.00 0.00 0.00 2.69
8369 16822 2.342648 GTCTTTGGACGGCGGACT 59.657 61.111 13.24 0.00 32.47 3.85
8394 16847 4.276926 GGATATTCACATGGCTTTGTCCTC 59.723 45.833 0.00 0.00 0.00 3.71
8420 16873 0.461961 ATGAAGTACAGCGCCTCCTC 59.538 55.000 2.29 0.00 0.00 3.71
8449 16904 6.828788 AGTAGCAATGATCATCTCAAGTCAT 58.171 36.000 9.06 0.00 37.44 3.06
8466 16921 7.561251 TGTCCAATATAGCTGTAAAGTAGCAA 58.439 34.615 0.00 0.00 43.53 3.91
8506 16961 1.339151 GGGCCGAACATCTCTCTTTGT 60.339 52.381 0.00 0.00 0.00 2.83
8515 16970 2.341846 TATTTGAGGGGCCGAACATC 57.658 50.000 0.00 0.00 0.00 3.06
8601 17056 3.596214 GTTTGAGCGAGAAATGGGAGTA 58.404 45.455 0.00 0.00 0.00 2.59
8652 17109 9.330063 CATGAGTAAACTGAATATTTGGCTAGA 57.670 33.333 0.00 0.00 0.00 2.43
8692 17178 1.007336 GTTGATGTTGCTGCTGCTGC 61.007 55.000 22.51 22.51 40.48 5.25
8713 17199 1.810151 TGCGTATCTGTTTTCTTGGCC 59.190 47.619 0.00 0.00 0.00 5.36
8716 17202 4.082274 TGCATGCGTATCTGTTTTCTTG 57.918 40.909 14.09 0.00 0.00 3.02
8719 17205 5.626543 CCATTATGCATGCGTATCTGTTTTC 59.373 40.000 19.99 0.00 0.00 2.29
8720 17206 5.299028 TCCATTATGCATGCGTATCTGTTTT 59.701 36.000 19.99 0.00 0.00 2.43
8726 17212 4.434725 CGAACTCCATTATGCATGCGTATC 60.435 45.833 19.99 11.53 0.00 2.24
8731 17217 1.949525 ACCGAACTCCATTATGCATGC 59.050 47.619 11.82 11.82 0.00 4.06
8739 17225 7.664318 ACTTGATAGTTTAAACCGAACTCCATT 59.336 33.333 14.72 0.00 38.28 3.16
8784 17270 7.865385 GCCAAAACTTTGTCATAACTACATCAA 59.135 33.333 1.76 0.00 36.45 2.57
8790 17276 7.309133 CCTGATGCCAAAACTTTGTCATAACTA 60.309 37.037 0.00 0.00 36.94 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.