Multiple sequence alignment - TraesCS7D01G058200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G058200 chr7D 100.000 2803 0 0 1 2803 31118399 31121201 0.000000e+00 5177
1 TraesCS7D01G058200 chr7D 84.453 804 92 19 1039 1833 58829634 58830413 0.000000e+00 761
2 TraesCS7D01G058200 chr7D 82.950 827 101 22 1015 1839 58843067 58842279 0.000000e+00 710
3 TraesCS7D01G058200 chr7D 99.640 278 1 0 2010 2287 31139033 31138756 2.490000e-140 508
4 TraesCS7D01G058200 chr7D 94.485 272 12 3 2535 2803 14575588 14575317 1.550000e-112 416
5 TraesCS7D01G058200 chr7D 94.118 272 15 1 2533 2803 576854920 576855191 2.010000e-111 412
6 TraesCS7D01G058200 chr7D 94.096 271 14 2 2535 2803 418544971 418544701 7.230000e-111 411
7 TraesCS7D01G058200 chr7D 95.547 247 9 2 2288 2532 31133308 31133062 7.280000e-106 394
8 TraesCS7D01G058200 chr7D 91.111 135 12 0 1015 1149 31107345 31107211 1.710000e-42 183
9 TraesCS7D01G058200 chr7A 93.619 1003 43 6 1015 2010 31591865 31592853 0.000000e+00 1478
10 TraesCS7D01G058200 chr7A 87.572 1038 79 21 1 1017 31694129 31695137 0.000000e+00 1157
11 TraesCS7D01G058200 chr7A 89.286 924 66 9 1 915 31573915 31573016 0.000000e+00 1127
12 TraesCS7D01G058200 chr7A 84.355 799 107 11 1039 1833 63378215 63378999 0.000000e+00 767
13 TraesCS7D01G058200 chr7A 87.354 601 64 3 1239 1839 63383997 63383409 0.000000e+00 678
14 TraesCS7D01G058200 chr7A 87.755 392 18 12 2160 2536 31593159 31593535 5.550000e-117 431
15 TraesCS7D01G058200 chr7A 94.161 274 14 2 2531 2803 736596209 736595937 1.550000e-112 416
16 TraesCS7D01G058200 chr7A 93.478 276 14 2 2529 2803 62566586 62566314 9.350000e-110 407
17 TraesCS7D01G058200 chr7A 84.375 192 18 7 2300 2482 31654734 31654922 7.980000e-41 178
18 TraesCS7D01G058200 chr7A 96.667 60 2 0 2077 2136 31592968 31593027 1.780000e-17 100
19 TraesCS7D01G058200 chr5D 91.141 824 45 11 1015 1834 37201894 37202693 0.000000e+00 1092
20 TraesCS7D01G058200 chr5D 82.365 964 72 38 1050 1959 508999683 509000602 0.000000e+00 749
21 TraesCS7D01G058200 chr5D 92.553 282 19 2 2523 2803 541600199 541599919 1.210000e-108 403
22 TraesCS7D01G058200 chr5B 89.455 825 44 20 1015 1834 27813128 27813914 0.000000e+00 1002
23 TraesCS7D01G058200 chr4A 95.922 515 12 3 56 565 697436599 697436089 0.000000e+00 826
24 TraesCS7D01G058200 chr4A 84.039 827 98 20 1017 1833 675932390 675933192 0.000000e+00 765
25 TraesCS7D01G058200 chr4A 83.194 839 104 19 1015 1839 675955323 675954508 0.000000e+00 734
26 TraesCS7D01G058200 chr2D 94.485 272 14 1 2533 2803 27774693 27774964 4.320000e-113 418
27 TraesCS7D01G058200 chr3D 93.885 278 14 3 2529 2803 535508664 535508387 1.550000e-112 416
28 TraesCS7D01G058200 chr1D 94.096 271 12 3 2535 2803 447464013 447463745 2.600000e-110 409


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G058200 chr7D 31118399 31121201 2802 False 5177.000000 5177 100.000000 1 2803 1 chr7D.!!$F1 2802
1 TraesCS7D01G058200 chr7D 58829634 58830413 779 False 761.000000 761 84.453000 1039 1833 1 chr7D.!!$F2 794
2 TraesCS7D01G058200 chr7D 58842279 58843067 788 True 710.000000 710 82.950000 1015 1839 1 chr7D.!!$R5 824
3 TraesCS7D01G058200 chr7A 31694129 31695137 1008 False 1157.000000 1157 87.572000 1 1017 1 chr7A.!!$F2 1016
4 TraesCS7D01G058200 chr7A 31573016 31573915 899 True 1127.000000 1127 89.286000 1 915 1 chr7A.!!$R1 914
5 TraesCS7D01G058200 chr7A 63378215 63378999 784 False 767.000000 767 84.355000 1039 1833 1 chr7A.!!$F3 794
6 TraesCS7D01G058200 chr7A 63383409 63383997 588 True 678.000000 678 87.354000 1239 1839 1 chr7A.!!$R3 600
7 TraesCS7D01G058200 chr7A 31591865 31593535 1670 False 669.666667 1478 92.680333 1015 2536 3 chr7A.!!$F4 1521
8 TraesCS7D01G058200 chr5D 37201894 37202693 799 False 1092.000000 1092 91.141000 1015 1834 1 chr5D.!!$F1 819
9 TraesCS7D01G058200 chr5D 508999683 509000602 919 False 749.000000 749 82.365000 1050 1959 1 chr5D.!!$F2 909
10 TraesCS7D01G058200 chr5B 27813128 27813914 786 False 1002.000000 1002 89.455000 1015 1834 1 chr5B.!!$F1 819
11 TraesCS7D01G058200 chr4A 697436089 697436599 510 True 826.000000 826 95.922000 56 565 1 chr4A.!!$R2 509
12 TraesCS7D01G058200 chr4A 675932390 675933192 802 False 765.000000 765 84.039000 1017 1833 1 chr4A.!!$F1 816
13 TraesCS7D01G058200 chr4A 675954508 675955323 815 True 734.000000 734 83.194000 1015 1839 1 chr4A.!!$R1 824

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
738 763 0.179004 ACGCATTCAGGGTTGTCCAA 60.179 50.0 0.0 0.0 41.09 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2687 3083 0.032515 TCCCAGCCCGTGAAGATAGA 60.033 55.0 0.0 0.0 0.0 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 43 8.321353 AGTTCTGAATTCTGACCACATATACAA 58.679 33.333 13.97 0.00 0.00 2.41
129 143 7.731882 TGACGAAATTAACAGTTGGTTATGA 57.268 32.000 0.00 0.00 41.43 2.15
147 162 7.396907 TGGTTATGATGATCACCAAAGTCAATT 59.603 33.333 0.00 0.00 33.63 2.32
148 163 8.902806 GGTTATGATGATCACCAAAGTCAATTA 58.097 33.333 0.00 0.00 0.00 1.40
400 425 3.012518 GTGTACAAGCTGGCAGATGATT 58.987 45.455 20.86 2.19 0.00 2.57
576 601 1.268539 GGTGAGTTTGTTTGTGAGGCG 60.269 52.381 0.00 0.00 0.00 5.52
594 619 1.154205 CGGGTGAAGATGGCGATGTC 61.154 60.000 0.00 0.00 0.00 3.06
620 645 1.738365 CGGCCTGTCAGAGACTGAATG 60.738 57.143 0.00 0.35 42.46 2.67
625 650 4.635223 CCTGTCAGAGACTGAATGTTTGA 58.365 43.478 0.00 0.00 42.46 2.69
675 700 3.799420 GCATCGAGATCAGGTGTAAGAAC 59.201 47.826 0.00 0.00 0.00 3.01
676 701 4.363999 CATCGAGATCAGGTGTAAGAACC 58.636 47.826 0.00 0.00 40.85 3.62
679 704 3.444034 CGAGATCAGGTGTAAGAACCAGA 59.556 47.826 0.00 0.00 43.20 3.86
680 705 4.098654 CGAGATCAGGTGTAAGAACCAGAT 59.901 45.833 1.36 1.36 46.00 2.90
695 720 7.979786 AGAACCAGATCAGTCTAATTAAGGA 57.020 36.000 0.00 0.00 32.09 3.36
706 731 9.167311 TCAGTCTAATTAAGGAAATGAGCTTTC 57.833 33.333 0.00 0.00 42.18 2.62
709 734 7.065923 GTCTAATTAAGGAAATGAGCTTTCGGT 59.934 37.037 0.00 0.00 43.57 4.69
712 737 7.881775 ATTAAGGAAATGAGCTTTCGGTATT 57.118 32.000 0.00 0.00 43.57 1.89
714 739 8.795842 TTAAGGAAATGAGCTTTCGGTATTAA 57.204 30.769 0.00 0.00 43.57 1.40
716 741 5.589050 AGGAAATGAGCTTTCGGTATTAACC 59.411 40.000 0.00 0.00 43.57 2.85
729 754 3.001939 GGTATTAACCGAACGCATTCAGG 59.998 47.826 0.00 0.00 35.62 3.86
730 755 1.444836 TTAACCGAACGCATTCAGGG 58.555 50.000 7.97 0.00 34.64 4.45
731 756 0.322322 TAACCGAACGCATTCAGGGT 59.678 50.000 7.97 4.27 46.58 4.34
736 761 4.397348 ACGCATTCAGGGTTGTCC 57.603 55.556 0.00 0.00 41.09 4.02
737 762 1.454104 ACGCATTCAGGGTTGTCCA 59.546 52.632 0.00 0.00 41.09 4.02
738 763 0.179004 ACGCATTCAGGGTTGTCCAA 60.179 50.000 0.00 0.00 41.09 3.53
743 768 2.286365 TTCAGGGTTGTCCAATGTCC 57.714 50.000 0.00 0.00 38.24 4.02
750 775 1.888512 GTTGTCCAATGTCCAGTGCAT 59.111 47.619 0.00 0.00 0.00 3.96
767 796 4.726825 AGTGCATAGGGGAAATTAAGGAGA 59.273 41.667 0.00 0.00 0.00 3.71
785 814 6.630444 AGGAGACATATTTGTTCATCATGC 57.370 37.500 0.00 0.00 35.79 4.06
789 818 8.790718 GGAGACATATTTGTTCATCATGCTATT 58.209 33.333 0.00 0.00 35.79 1.73
801 830 9.173939 GTTCATCATGCTATTAAACTAATGTGC 57.826 33.333 0.00 0.00 33.04 4.57
802 831 8.681486 TCATCATGCTATTAAACTAATGTGCT 57.319 30.769 0.00 0.00 33.35 4.40
803 832 9.777297 TCATCATGCTATTAAACTAATGTGCTA 57.223 29.630 0.00 0.00 33.35 3.49
821 850 9.842775 AATGTGCTATCTTAGATTTCATTCAGA 57.157 29.630 0.00 0.00 0.00 3.27
839 868 9.690913 TCATTCAGATAGATGAATCCTTTTTGT 57.309 29.630 0.00 0.00 44.68 2.83
883 912 7.855784 AAAAACAGTTAATGAAGAGGGGAAT 57.144 32.000 0.00 0.00 0.00 3.01
884 913 8.950007 AAAAACAGTTAATGAAGAGGGGAATA 57.050 30.769 0.00 0.00 0.00 1.75
885 914 9.547279 AAAAACAGTTAATGAAGAGGGGAATAT 57.453 29.630 0.00 0.00 0.00 1.28
886 915 9.547279 AAAACAGTTAATGAAGAGGGGAATATT 57.453 29.630 0.00 0.00 0.00 1.28
888 917 9.628500 AACAGTTAATGAAGAGGGGAATATTAC 57.372 33.333 0.00 0.00 0.00 1.89
889 918 8.218488 ACAGTTAATGAAGAGGGGAATATTACC 58.782 37.037 8.37 8.37 0.00 2.85
902 931 7.766736 GGGAATATTACCCTCCCTGTATTAT 57.233 40.000 5.24 0.00 44.81 1.28
903 932 8.865244 GGGAATATTACCCTCCCTGTATTATA 57.135 38.462 5.24 0.00 44.81 0.98
904 933 8.712103 GGGAATATTACCCTCCCTGTATTATAC 58.288 40.741 5.24 0.00 44.81 1.47
905 934 9.275572 GGAATATTACCCTCCCTGTATTATACA 57.724 37.037 4.89 4.89 37.13 2.29
908 937 6.845758 TTACCCTCCCTGTATTATACATCG 57.154 41.667 5.46 0.00 38.15 3.84
909 938 5.006896 ACCCTCCCTGTATTATACATCGA 57.993 43.478 5.46 3.90 38.15 3.59
910 939 5.590818 ACCCTCCCTGTATTATACATCGAT 58.409 41.667 5.46 0.00 38.15 3.59
911 940 5.657302 ACCCTCCCTGTATTATACATCGATC 59.343 44.000 5.46 0.00 38.15 3.69
912 941 5.069251 CCCTCCCTGTATTATACATCGATCC 59.931 48.000 5.46 0.00 38.15 3.36
913 942 5.894393 CCTCCCTGTATTATACATCGATCCT 59.106 44.000 5.46 0.00 38.15 3.24
914 943 6.381420 CCTCCCTGTATTATACATCGATCCTT 59.619 42.308 5.46 0.00 38.15 3.36
915 944 7.406031 TCCCTGTATTATACATCGATCCTTC 57.594 40.000 5.46 0.00 38.15 3.46
916 945 7.182760 TCCCTGTATTATACATCGATCCTTCT 58.817 38.462 5.46 0.00 38.15 2.85
917 946 7.674348 TCCCTGTATTATACATCGATCCTTCTT 59.326 37.037 5.46 0.00 38.15 2.52
918 947 7.761704 CCCTGTATTATACATCGATCCTTCTTG 59.238 40.741 5.46 0.00 38.15 3.02
919 948 8.523658 CCTGTATTATACATCGATCCTTCTTGA 58.476 37.037 5.46 0.00 38.15 3.02
920 949 9.566530 CTGTATTATACATCGATCCTTCTTGAG 57.433 37.037 5.46 0.00 38.15 3.02
921 950 8.523658 TGTATTATACATCGATCCTTCTTGAGG 58.476 37.037 0.29 0.00 39.30 3.86
922 951 6.978674 TTATACATCGATCCTTCTTGAGGT 57.021 37.500 0.00 0.00 46.39 3.85
923 952 3.533606 ACATCGATCCTTCTTGAGGTG 57.466 47.619 0.00 0.00 46.39 4.00
924 953 3.099905 ACATCGATCCTTCTTGAGGTGA 58.900 45.455 0.00 0.00 46.39 4.02
925 954 3.515502 ACATCGATCCTTCTTGAGGTGAA 59.484 43.478 0.00 0.00 46.39 3.18
926 955 4.163078 ACATCGATCCTTCTTGAGGTGAAT 59.837 41.667 0.00 0.00 46.39 2.57
927 956 4.128925 TCGATCCTTCTTGAGGTGAATG 57.871 45.455 0.00 0.00 46.39 2.67
928 957 3.769300 TCGATCCTTCTTGAGGTGAATGA 59.231 43.478 0.00 0.00 46.39 2.57
929 958 4.222810 TCGATCCTTCTTGAGGTGAATGAA 59.777 41.667 0.00 0.00 46.39 2.57
930 959 4.569966 CGATCCTTCTTGAGGTGAATGAAG 59.430 45.833 0.00 0.00 46.39 3.02
931 960 5.625426 CGATCCTTCTTGAGGTGAATGAAGA 60.625 44.000 0.00 0.00 46.39 2.87
932 961 5.157940 TCCTTCTTGAGGTGAATGAAGAG 57.842 43.478 0.00 0.00 46.39 2.85
933 962 4.840680 TCCTTCTTGAGGTGAATGAAGAGA 59.159 41.667 0.00 0.00 46.39 3.10
934 963 5.486775 TCCTTCTTGAGGTGAATGAAGAGAT 59.513 40.000 0.00 0.00 46.39 2.75
935 964 5.816777 CCTTCTTGAGGTGAATGAAGAGATC 59.183 44.000 0.00 0.00 40.95 2.75
936 965 6.352051 CCTTCTTGAGGTGAATGAAGAGATCT 60.352 42.308 0.00 0.00 40.95 2.75
937 966 5.975282 TCTTGAGGTGAATGAAGAGATCTG 58.025 41.667 0.00 0.00 0.00 2.90
938 967 5.718607 TCTTGAGGTGAATGAAGAGATCTGA 59.281 40.000 0.00 0.00 0.00 3.27
939 968 6.383436 TCTTGAGGTGAATGAAGAGATCTGAT 59.617 38.462 0.00 0.00 0.00 2.90
940 969 6.159299 TGAGGTGAATGAAGAGATCTGATC 57.841 41.667 9.65 9.65 0.00 2.92
941 970 5.070180 TGAGGTGAATGAAGAGATCTGATCC 59.930 44.000 13.83 6.10 0.00 3.36
942 971 4.967442 AGGTGAATGAAGAGATCTGATCCA 59.033 41.667 13.83 5.52 0.00 3.41
943 972 5.607592 AGGTGAATGAAGAGATCTGATCCAT 59.392 40.000 13.83 7.52 0.00 3.41
944 973 5.701750 GGTGAATGAAGAGATCTGATCCATG 59.298 44.000 13.83 0.00 0.00 3.66
945 974 6.289834 GTGAATGAAGAGATCTGATCCATGT 58.710 40.000 13.83 0.00 0.00 3.21
946 975 6.203145 GTGAATGAAGAGATCTGATCCATGTG 59.797 42.308 13.83 0.00 0.00 3.21
947 976 4.684484 TGAAGAGATCTGATCCATGTGG 57.316 45.455 13.83 0.00 0.00 4.17
948 977 4.035814 TGAAGAGATCTGATCCATGTGGT 58.964 43.478 13.83 0.00 36.34 4.16
949 978 4.100653 TGAAGAGATCTGATCCATGTGGTC 59.899 45.833 13.83 3.71 36.34 4.02
950 979 3.926198 AGAGATCTGATCCATGTGGTCT 58.074 45.455 13.83 5.87 36.34 3.85
951 980 4.296912 AGAGATCTGATCCATGTGGTCTT 58.703 43.478 13.83 0.00 36.34 3.01
952 981 5.462240 AGAGATCTGATCCATGTGGTCTTA 58.538 41.667 13.83 0.00 36.34 2.10
953 982 6.083383 AGAGATCTGATCCATGTGGTCTTAT 58.917 40.000 13.83 0.00 36.34 1.73
954 983 7.244558 AGAGATCTGATCCATGTGGTCTTATA 58.755 38.462 13.83 0.00 36.34 0.98
955 984 7.396907 AGAGATCTGATCCATGTGGTCTTATAG 59.603 40.741 13.83 0.00 36.34 1.31
956 985 7.015680 AGATCTGATCCATGTGGTCTTATAGT 58.984 38.462 13.83 0.00 36.34 2.12
957 986 7.512058 AGATCTGATCCATGTGGTCTTATAGTT 59.488 37.037 13.83 0.00 36.34 2.24
958 987 7.055667 TCTGATCCATGTGGTCTTATAGTTC 57.944 40.000 0.00 0.00 36.34 3.01
959 988 6.611236 TCTGATCCATGTGGTCTTATAGTTCA 59.389 38.462 0.00 0.00 36.34 3.18
960 989 6.820335 TGATCCATGTGGTCTTATAGTTCAG 58.180 40.000 0.00 0.00 36.34 3.02
961 990 5.023533 TCCATGTGGTCTTATAGTTCAGC 57.976 43.478 0.00 0.00 36.34 4.26
962 991 4.130118 CCATGTGGTCTTATAGTTCAGCC 58.870 47.826 0.00 0.00 0.00 4.85
963 992 4.384098 CCATGTGGTCTTATAGTTCAGCCA 60.384 45.833 0.00 0.00 0.00 4.75
964 993 4.471904 TGTGGTCTTATAGTTCAGCCAG 57.528 45.455 0.00 0.00 0.00 4.85
965 994 3.198872 GTGGTCTTATAGTTCAGCCAGC 58.801 50.000 0.00 0.00 0.00 4.85
966 995 2.837591 TGGTCTTATAGTTCAGCCAGCA 59.162 45.455 0.00 0.00 0.00 4.41
967 996 3.198872 GGTCTTATAGTTCAGCCAGCAC 58.801 50.000 0.00 0.00 0.00 4.40
968 997 3.369471 GGTCTTATAGTTCAGCCAGCACA 60.369 47.826 0.00 0.00 0.00 4.57
969 998 4.253685 GTCTTATAGTTCAGCCAGCACAA 58.746 43.478 0.00 0.00 0.00 3.33
970 999 4.093556 GTCTTATAGTTCAGCCAGCACAAC 59.906 45.833 0.00 0.00 0.00 3.32
971 1000 2.566833 ATAGTTCAGCCAGCACAACA 57.433 45.000 6.52 0.00 0.00 3.33
972 1001 2.566833 TAGTTCAGCCAGCACAACAT 57.433 45.000 6.52 0.00 0.00 2.71
973 1002 1.696063 AGTTCAGCCAGCACAACATT 58.304 45.000 6.52 0.00 0.00 2.71
974 1003 1.338973 AGTTCAGCCAGCACAACATTG 59.661 47.619 6.52 0.00 0.00 2.82
975 1004 1.067516 GTTCAGCCAGCACAACATTGT 59.932 47.619 0.00 0.00 43.36 2.71
976 1005 2.268762 TCAGCCAGCACAACATTGTA 57.731 45.000 0.00 0.00 39.91 2.41
977 1006 1.879380 TCAGCCAGCACAACATTGTAC 59.121 47.619 0.00 0.00 39.91 2.90
978 1007 1.881973 CAGCCAGCACAACATTGTACT 59.118 47.619 0.00 0.00 39.91 2.73
979 1008 2.095567 CAGCCAGCACAACATTGTACTC 60.096 50.000 0.00 0.00 39.91 2.59
980 1009 1.135972 GCCAGCACAACATTGTACTCG 60.136 52.381 0.00 0.00 39.91 4.18
981 1010 1.135972 CCAGCACAACATTGTACTCGC 60.136 52.381 0.00 0.00 39.91 5.03
982 1011 1.530720 CAGCACAACATTGTACTCGCA 59.469 47.619 0.00 0.00 39.91 5.10
983 1012 2.160219 CAGCACAACATTGTACTCGCAT 59.840 45.455 0.00 0.00 39.91 4.73
984 1013 2.813754 AGCACAACATTGTACTCGCATT 59.186 40.909 0.00 0.00 39.91 3.56
985 1014 2.910482 GCACAACATTGTACTCGCATTG 59.090 45.455 0.00 0.00 39.91 2.82
986 1015 2.910482 CACAACATTGTACTCGCATTGC 59.090 45.455 0.00 0.00 39.91 3.56
987 1016 2.551887 ACAACATTGTACTCGCATTGCA 59.448 40.909 9.69 0.00 40.16 4.08
988 1017 3.004210 ACAACATTGTACTCGCATTGCAA 59.996 39.130 9.69 0.00 40.16 4.08
989 1018 3.913548 ACATTGTACTCGCATTGCAAA 57.086 38.095 1.71 0.00 0.00 3.68
990 1019 3.825308 ACATTGTACTCGCATTGCAAAG 58.175 40.909 1.71 0.00 0.00 2.77
991 1020 2.330231 TTGTACTCGCATTGCAAAGC 57.670 45.000 16.44 16.44 0.00 3.51
992 1021 1.522668 TGTACTCGCATTGCAAAGCT 58.477 45.000 22.79 8.43 0.00 3.74
993 1022 1.879380 TGTACTCGCATTGCAAAGCTT 59.121 42.857 22.79 10.54 0.00 3.74
994 1023 2.095768 TGTACTCGCATTGCAAAGCTTC 60.096 45.455 22.79 9.82 0.00 3.86
995 1024 1.242076 ACTCGCATTGCAAAGCTTCT 58.758 45.000 22.79 3.40 0.00 2.85
996 1025 1.610522 ACTCGCATTGCAAAGCTTCTT 59.389 42.857 22.79 3.48 0.00 2.52
997 1026 2.035066 ACTCGCATTGCAAAGCTTCTTT 59.965 40.909 22.79 1.81 0.00 2.52
998 1027 3.253188 ACTCGCATTGCAAAGCTTCTTTA 59.747 39.130 22.79 2.64 0.00 1.85
999 1028 3.825308 TCGCATTGCAAAGCTTCTTTAG 58.175 40.909 22.79 7.05 0.00 1.85
1000 1029 3.501828 TCGCATTGCAAAGCTTCTTTAGA 59.498 39.130 22.79 9.19 0.00 2.10
1001 1030 4.156556 TCGCATTGCAAAGCTTCTTTAGAT 59.843 37.500 22.79 0.00 0.00 1.98
1002 1031 4.264614 CGCATTGCAAAGCTTCTTTAGATG 59.735 41.667 22.79 4.44 0.00 2.90
1003 1032 5.404946 GCATTGCAAAGCTTCTTTAGATGA 58.595 37.500 18.89 0.00 0.00 2.92
1004 1033 5.865552 GCATTGCAAAGCTTCTTTAGATGAA 59.134 36.000 18.89 0.00 0.00 2.57
1005 1034 6.366877 GCATTGCAAAGCTTCTTTAGATGAAA 59.633 34.615 18.89 0.00 0.00 2.69
1006 1035 7.411588 GCATTGCAAAGCTTCTTTAGATGAAAG 60.412 37.037 18.89 0.00 45.23 2.62
1072 1101 4.832608 CCCGGCGCAAGTACCTCC 62.833 72.222 10.83 0.00 41.68 4.30
1110 1139 3.447025 GATGAAGCTCGTCCCCGGG 62.447 68.421 15.80 15.80 37.72 5.73
1113 1142 2.687566 AAGCTCGTCCCCGGGAAT 60.688 61.111 26.32 0.00 36.35 3.01
1149 1179 3.873361 TCACCTCCTTCTACGTACGTATG 59.127 47.826 26.98 19.04 0.00 2.39
1161 1195 4.277258 ACGTACGTATGCTACTTCGATTG 58.723 43.478 21.41 0.00 0.00 2.67
1167 1201 5.687730 ACGTATGCTACTTCGATTGAGATTG 59.312 40.000 0.00 0.00 0.00 2.67
1201 1240 5.807520 ACACATACTTAGTTCAGCAGATTCG 59.192 40.000 0.00 0.00 0.00 3.34
1202 1241 6.036470 CACATACTTAGTTCAGCAGATTCGA 58.964 40.000 0.00 0.00 0.00 3.71
1203 1242 6.699204 CACATACTTAGTTCAGCAGATTCGAT 59.301 38.462 0.00 0.00 0.00 3.59
1204 1243 7.223582 CACATACTTAGTTCAGCAGATTCGATT 59.776 37.037 0.00 0.00 0.00 3.34
1205 1244 7.436673 ACATACTTAGTTCAGCAGATTCGATTC 59.563 37.037 0.00 0.00 0.00 2.52
1206 1245 5.724328 ACTTAGTTCAGCAGATTCGATTCA 58.276 37.500 9.78 0.00 0.00 2.57
1207 1246 5.809562 ACTTAGTTCAGCAGATTCGATTCAG 59.190 40.000 9.78 3.01 0.00 3.02
1211 1250 4.039151 TCAGCAGATTCGATTCAGAGAC 57.961 45.455 9.78 0.00 0.00 3.36
1541 1625 4.767255 GCCACGCTCTGGGACTGG 62.767 72.222 0.00 0.00 41.02 4.00
1542 1626 4.087892 CCACGCTCTGGGACTGGG 62.088 72.222 0.00 0.00 36.18 4.45
1543 1627 2.997315 CACGCTCTGGGACTGGGA 60.997 66.667 0.00 0.00 0.00 4.37
1544 1628 2.997897 ACGCTCTGGGACTGGGAC 60.998 66.667 0.00 0.00 0.00 4.46
1630 1714 3.207669 CTACCGCGCCTACTCCGT 61.208 66.667 0.00 0.00 0.00 4.69
1799 1990 4.467084 GACGGCTGGCGATTCCCA 62.467 66.667 30.58 0.00 0.00 4.37
1800 1991 3.757248 GACGGCTGGCGATTCCCAT 62.757 63.158 30.58 5.38 33.64 4.00
1884 2090 8.020819 TGTTCGTTATCCATTCATTTCTTGTTC 58.979 33.333 0.00 0.00 0.00 3.18
1960 2167 7.546250 TTCTTGCCTAGAGGGATTAGATTAG 57.454 40.000 0.00 0.00 34.74 1.73
1961 2168 6.864421 TCTTGCCTAGAGGGATTAGATTAGA 58.136 40.000 0.00 0.00 34.74 2.10
1962 2169 6.951198 TCTTGCCTAGAGGGATTAGATTAGAG 59.049 42.308 0.00 0.00 34.74 2.43
1963 2170 6.220881 TGCCTAGAGGGATTAGATTAGAGT 57.779 41.667 0.00 0.00 37.23 3.24
1964 2171 7.344599 TGCCTAGAGGGATTAGATTAGAGTA 57.655 40.000 0.00 0.00 37.23 2.59
2033 2294 1.699343 GTCTGTCTCGGCAACTGTAC 58.301 55.000 0.00 0.00 0.00 2.90
2034 2295 1.269998 GTCTGTCTCGGCAACTGTACT 59.730 52.381 0.00 0.00 0.00 2.73
2036 2297 1.000163 CTGTCTCGGCAACTGTACTGT 60.000 52.381 0.00 0.00 0.00 3.55
2038 2299 1.000607 GTCTCGGCAACTGTACTGTCA 60.001 52.381 5.81 0.00 0.00 3.58
2039 2300 1.684450 TCTCGGCAACTGTACTGTCAA 59.316 47.619 5.81 0.00 0.00 3.18
2040 2301 2.299013 TCTCGGCAACTGTACTGTCAAT 59.701 45.455 5.81 0.00 0.00 2.57
2041 2302 2.668457 CTCGGCAACTGTACTGTCAATC 59.332 50.000 5.81 0.00 0.00 2.67
2042 2303 1.390123 CGGCAACTGTACTGTCAATCG 59.610 52.381 5.81 5.02 0.00 3.34
2043 2304 1.732259 GGCAACTGTACTGTCAATCGG 59.268 52.381 5.81 0.00 0.00 4.18
2044 2305 1.128692 GCAACTGTACTGTCAATCGGC 59.871 52.381 5.81 0.97 0.00 5.54
2045 2306 1.732259 CAACTGTACTGTCAATCGGCC 59.268 52.381 5.81 0.00 0.00 6.13
2046 2307 1.267121 ACTGTACTGTCAATCGGCCT 58.733 50.000 0.00 0.00 0.00 5.19
2047 2308 1.204941 ACTGTACTGTCAATCGGCCTC 59.795 52.381 0.00 0.00 0.00 4.70
2048 2309 0.172578 TGTACTGTCAATCGGCCTCG 59.827 55.000 0.00 0.00 37.82 4.63
2049 2310 0.527817 GTACTGTCAATCGGCCTCGG 60.528 60.000 0.00 0.00 36.95 4.63
2050 2311 2.292794 TACTGTCAATCGGCCTCGGC 62.293 60.000 0.00 0.00 41.06 5.54
2051 2312 3.376935 CTGTCAATCGGCCTCGGCT 62.377 63.158 8.00 0.00 41.60 5.52
2052 2313 2.586357 GTCAATCGGCCTCGGCTC 60.586 66.667 8.00 0.00 41.60 4.70
2053 2314 2.759973 TCAATCGGCCTCGGCTCT 60.760 61.111 8.00 0.00 41.60 4.09
2054 2315 2.587194 CAATCGGCCTCGGCTCTG 60.587 66.667 8.00 0.00 41.60 3.35
2055 2316 2.759973 AATCGGCCTCGGCTCTGA 60.760 61.111 8.00 4.42 41.60 3.27
2056 2317 2.136878 AATCGGCCTCGGCTCTGAT 61.137 57.895 8.00 6.49 41.60 2.90
2113 2387 3.487879 CCGTGTGTCCTGTTTTTAACCAC 60.488 47.826 0.00 0.00 0.00 4.16
2136 2410 5.300792 ACCGGAACAACAGTGAATAAATGTT 59.699 36.000 9.46 0.00 37.64 2.71
2137 2411 6.183360 ACCGGAACAACAGTGAATAAATGTTT 60.183 34.615 9.46 0.00 35.04 2.83
2138 2412 6.699642 CCGGAACAACAGTGAATAAATGTTTT 59.300 34.615 0.00 0.00 35.04 2.43
2139 2413 7.223777 CCGGAACAACAGTGAATAAATGTTTTT 59.776 33.333 0.00 0.00 35.04 1.94
2140 2414 9.239002 CGGAACAACAGTGAATAAATGTTTTTA 57.761 29.630 0.00 0.00 35.04 1.52
2144 2418 9.877178 ACAACAGTGAATAAATGTTTTTAACCA 57.123 25.926 0.00 0.00 35.04 3.67
2146 2420 8.880878 ACAGTGAATAAATGTTTTTAACCACC 57.119 30.769 0.00 0.00 35.98 4.61
2147 2421 7.650104 ACAGTGAATAAATGTTTTTAACCACCG 59.350 33.333 0.00 0.00 35.98 4.94
2148 2422 7.115663 CAGTGAATAAATGTTTTTAACCACCGG 59.884 37.037 0.00 0.00 35.98 5.28
2149 2423 7.014422 AGTGAATAAATGTTTTTAACCACCGGA 59.986 33.333 9.46 0.00 35.98 5.14
2150 2424 7.652507 GTGAATAAATGTTTTTAACCACCGGAA 59.347 33.333 9.46 0.00 32.90 4.30
2151 2425 7.652507 TGAATAAATGTTTTTAACCACCGGAAC 59.347 33.333 9.46 0.00 31.33 3.62
2152 2426 5.340439 AAATGTTTTTAACCACCGGAACA 57.660 34.783 9.46 5.92 0.00 3.18
2153 2427 5.340439 AATGTTTTTAACCACCGGAACAA 57.660 34.783 9.46 0.00 31.69 2.83
2154 2428 4.107363 TGTTTTTAACCACCGGAACAAC 57.893 40.909 9.46 1.29 0.00 3.32
2155 2429 3.508793 TGTTTTTAACCACCGGAACAACA 59.491 39.130 9.46 4.31 0.00 3.33
2156 2430 4.106909 GTTTTTAACCACCGGAACAACAG 58.893 43.478 9.46 0.00 0.00 3.16
2157 2431 2.713863 TTAACCACCGGAACAACAGT 57.286 45.000 9.46 0.00 0.00 3.55
2204 2586 4.530581 GCACTTAGCAGGAGGAGC 57.469 61.111 0.00 0.00 44.79 4.70
2205 2587 1.904032 GCACTTAGCAGGAGGAGCT 59.096 57.895 0.00 0.00 45.77 4.09
2206 2588 0.461693 GCACTTAGCAGGAGGAGCTG 60.462 60.000 0.00 0.00 43.33 4.24
2207 2589 1.189752 CACTTAGCAGGAGGAGCTGA 58.810 55.000 0.00 0.00 43.33 4.26
2208 2590 1.761784 CACTTAGCAGGAGGAGCTGAT 59.238 52.381 0.00 0.00 43.33 2.90
2209 2591 1.761784 ACTTAGCAGGAGGAGCTGATG 59.238 52.381 0.00 0.00 43.33 3.07
2210 2592 2.037901 CTTAGCAGGAGGAGCTGATGA 58.962 52.381 0.00 0.00 43.33 2.92
2211 2593 1.702182 TAGCAGGAGGAGCTGATGAG 58.298 55.000 0.00 0.00 43.33 2.90
2212 2594 0.325484 AGCAGGAGGAGCTGATGAGT 60.325 55.000 0.00 0.00 41.61 3.41
2218 2600 3.052944 AGGAGGAGCTGATGAGTCTACTT 60.053 47.826 0.00 0.00 0.00 2.24
2236 2618 0.935831 TTCGGTTGCTGTCGTGTACG 60.936 55.000 0.00 0.00 41.45 3.67
2269 2663 2.161410 GCTATTGCACCATGTTCGTTCA 59.839 45.455 0.00 0.00 39.41 3.18
2305 2699 2.124570 ACCACATGATCTGCCGCC 60.125 61.111 0.00 0.00 0.00 6.13
2307 2701 2.191375 CACATGATCTGCCGCCCT 59.809 61.111 0.00 0.00 0.00 5.19
2308 2702 1.447217 CACATGATCTGCCGCCCTA 59.553 57.895 0.00 0.00 0.00 3.53
2332 2726 2.885135 TGGGCAGATTCATGTGAGTT 57.115 45.000 0.00 0.00 0.00 3.01
2365 2760 0.377203 CCGCCCTTAAAATCGCTGAC 59.623 55.000 0.00 0.00 0.00 3.51
2390 2785 4.119862 CACTTGGTTGGTCGGACTATATG 58.880 47.826 8.23 0.00 0.00 1.78
2396 2791 2.112190 TGGTCGGACTATATGCACCAA 58.888 47.619 8.23 0.00 30.64 3.67
2401 2796 5.479306 GTCGGACTATATGCACCAATGTAT 58.521 41.667 0.00 0.00 35.12 2.29
2468 2864 7.497249 TCATGTTTATTTTTGGGTGAGGTTTTG 59.503 33.333 0.00 0.00 0.00 2.44
2490 2886 1.027357 GCTATCATTGCACTGGTGGG 58.973 55.000 4.01 0.00 0.00 4.61
2491 2887 1.027357 CTATCATTGCACTGGTGGGC 58.973 55.000 4.01 0.00 0.00 5.36
2501 2897 3.496309 CTGGTGGGCTCTTGTGGCA 62.496 63.158 0.00 0.00 0.00 4.92
2532 2928 1.005097 TGGATATGCTCCCATGGATGC 59.995 52.381 15.22 17.07 44.23 3.91
2537 2933 2.824689 TGCTCCCATGGATGCTTAAA 57.175 45.000 15.22 0.00 30.89 1.52
2538 2934 2.658285 TGCTCCCATGGATGCTTAAAG 58.342 47.619 15.22 0.00 30.89 1.85
2539 2935 1.339291 GCTCCCATGGATGCTTAAAGC 59.661 52.381 15.22 5.09 42.82 3.51
2552 2948 4.591998 GCTTAAAGCAACTCTAGCAGAC 57.408 45.455 0.00 0.00 41.89 3.51
2553 2949 3.372514 GCTTAAAGCAACTCTAGCAGACC 59.627 47.826 0.00 0.00 41.89 3.85
2554 2950 2.481289 AAAGCAACTCTAGCAGACCC 57.519 50.000 0.00 0.00 0.00 4.46
2555 2951 0.615850 AAGCAACTCTAGCAGACCCC 59.384 55.000 0.00 0.00 0.00 4.95
2556 2952 1.153549 GCAACTCTAGCAGACCCCG 60.154 63.158 0.00 0.00 0.00 5.73
2557 2953 1.153549 CAACTCTAGCAGACCCCGC 60.154 63.158 0.00 0.00 0.00 6.13
2559 2955 1.192146 AACTCTAGCAGACCCCGCAA 61.192 55.000 0.00 0.00 0.00 4.85
2560 2956 1.192146 ACTCTAGCAGACCCCGCAAA 61.192 55.000 0.00 0.00 0.00 3.68
2561 2957 0.036388 CTCTAGCAGACCCCGCAAAA 60.036 55.000 0.00 0.00 0.00 2.44
2562 2958 0.321298 TCTAGCAGACCCCGCAAAAC 60.321 55.000 0.00 0.00 0.00 2.43
2565 2961 4.038080 CAGACCCCGCAAAACGCC 62.038 66.667 0.00 0.00 41.76 5.68
2582 2978 2.492560 CCCGGCCCGCAAAATAAC 59.507 61.111 0.00 0.00 0.00 1.89
2583 2979 2.492560 CCGGCCCGCAAAATAACC 59.507 61.111 0.00 0.00 0.00 2.85
2584 2980 2.049767 CCGGCCCGCAAAATAACCT 61.050 57.895 0.00 0.00 0.00 3.50
2586 2982 1.813859 GGCCCGCAAAATAACCTCC 59.186 57.895 0.00 0.00 0.00 4.30
2589 2985 1.273886 GCCCGCAAAATAACCTCCAAA 59.726 47.619 0.00 0.00 0.00 3.28
2590 2986 2.093711 GCCCGCAAAATAACCTCCAAAT 60.094 45.455 0.00 0.00 0.00 2.32
2592 2988 3.932089 CCCGCAAAATAACCTCCAAATTG 59.068 43.478 0.00 0.00 0.00 2.32
2594 2990 4.582441 GCAAAATAACCTCCAAATTGCG 57.418 40.909 0.00 0.00 33.35 4.85
2595 2991 3.370672 GCAAAATAACCTCCAAATTGCGG 59.629 43.478 0.00 0.00 33.35 5.69
2596 2992 3.885724 AAATAACCTCCAAATTGCGGG 57.114 42.857 4.92 3.46 0.00 6.13
2597 2993 1.111277 ATAACCTCCAAATTGCGGGC 58.889 50.000 4.92 0.00 0.00 6.13
2598 2994 0.968393 TAACCTCCAAATTGCGGGCC 60.968 55.000 0.00 0.00 0.00 5.80
2599 2995 3.825611 CCTCCAAATTGCGGGCCG 61.826 66.667 24.35 24.35 0.00 6.13
2600 2996 3.825611 CTCCAAATTGCGGGCCGG 61.826 66.667 29.48 9.54 0.00 6.13
2626 3022 1.523758 AAAATCTGCACGACCAGACC 58.476 50.000 10.94 0.00 44.00 3.85
2627 3023 0.321653 AAATCTGCACGACCAGACCC 60.322 55.000 10.94 0.00 44.00 4.46
2628 3024 2.185310 AATCTGCACGACCAGACCCC 62.185 60.000 10.94 0.00 44.00 4.95
2629 3025 4.742201 CTGCACGACCAGACCCCG 62.742 72.222 0.00 0.00 34.77 5.73
2632 3028 4.082523 CACGACCAGACCCCGCAT 62.083 66.667 0.00 0.00 0.00 4.73
2633 3029 3.771160 ACGACCAGACCCCGCATC 61.771 66.667 0.00 0.00 0.00 3.91
2634 3030 4.530857 CGACCAGACCCCGCATCC 62.531 72.222 0.00 0.00 0.00 3.51
2635 3031 4.530857 GACCAGACCCCGCATCCG 62.531 72.222 0.00 0.00 0.00 4.18
2653 3049 4.371590 GCACCGGCCCGCAAAAAT 62.372 61.111 0.00 0.00 0.00 1.82
2654 3050 2.341911 CACCGGCCCGCAAAAATT 59.658 55.556 0.00 0.00 0.00 1.82
2655 3051 1.301322 CACCGGCCCGCAAAAATTT 60.301 52.632 0.00 0.00 0.00 1.82
2656 3052 0.882484 CACCGGCCCGCAAAAATTTT 60.882 50.000 0.00 0.00 0.00 1.82
2657 3053 0.179043 ACCGGCCCGCAAAAATTTTT 60.179 45.000 10.41 10.41 0.00 1.94
2666 3062 2.035174 CAAAAATTTTTGCAGGGCGC 57.965 45.000 26.05 0.00 40.76 6.53
2667 3063 0.585838 AAAAATTTTTGCAGGGCGCG 59.414 45.000 15.25 0.00 46.97 6.86
2668 3064 1.227342 AAAATTTTTGCAGGGCGCGG 61.227 50.000 8.83 0.00 46.97 6.46
2669 3065 4.740431 ATTTTTGCAGGGCGCGGC 62.740 61.111 26.39 26.39 46.97 6.53
2676 3072 3.443045 CAGGGCGCGGCAAATCTT 61.443 61.111 34.30 9.00 0.00 2.40
2677 3073 3.134127 AGGGCGCGGCAAATCTTC 61.134 61.111 34.30 14.82 0.00 2.87
2678 3074 3.134127 GGGCGCGGCAAATCTTCT 61.134 61.111 34.30 0.00 0.00 2.85
2679 3075 2.405191 GGCGCGGCAAATCTTCTC 59.595 61.111 29.32 0.00 0.00 2.87
2680 3076 2.405191 GCGCGGCAAATCTTCTCC 59.595 61.111 8.83 0.00 0.00 3.71
2681 3077 3.102097 CGCGGCAAATCTTCTCCC 58.898 61.111 0.00 0.00 0.00 4.30
2682 3078 2.472909 CGCGGCAAATCTTCTCCCC 61.473 63.158 0.00 0.00 0.00 4.81
2683 3079 1.378514 GCGGCAAATCTTCTCCCCA 60.379 57.895 0.00 0.00 0.00 4.96
2684 3080 0.965363 GCGGCAAATCTTCTCCCCAA 60.965 55.000 0.00 0.00 0.00 4.12
2685 3081 0.811281 CGGCAAATCTTCTCCCCAAC 59.189 55.000 0.00 0.00 0.00 3.77
2686 3082 1.186200 GGCAAATCTTCTCCCCAACC 58.814 55.000 0.00 0.00 0.00 3.77
2687 3083 1.272704 GGCAAATCTTCTCCCCAACCT 60.273 52.381 0.00 0.00 0.00 3.50
2688 3084 2.095461 GCAAATCTTCTCCCCAACCTC 58.905 52.381 0.00 0.00 0.00 3.85
2689 3085 2.291217 GCAAATCTTCTCCCCAACCTCT 60.291 50.000 0.00 0.00 0.00 3.69
2690 3086 3.054361 GCAAATCTTCTCCCCAACCTCTA 60.054 47.826 0.00 0.00 0.00 2.43
2691 3087 4.385754 GCAAATCTTCTCCCCAACCTCTAT 60.386 45.833 0.00 0.00 0.00 1.98
2692 3088 5.372373 CAAATCTTCTCCCCAACCTCTATC 58.628 45.833 0.00 0.00 0.00 2.08
2693 3089 4.567987 ATCTTCTCCCCAACCTCTATCT 57.432 45.455 0.00 0.00 0.00 1.98
2694 3090 4.354208 TCTTCTCCCCAACCTCTATCTT 57.646 45.455 0.00 0.00 0.00 2.40
2695 3091 4.290942 TCTTCTCCCCAACCTCTATCTTC 58.709 47.826 0.00 0.00 0.00 2.87
2696 3092 3.776731 TCTCCCCAACCTCTATCTTCA 57.223 47.619 0.00 0.00 0.00 3.02
2697 3093 3.375699 TCTCCCCAACCTCTATCTTCAC 58.624 50.000 0.00 0.00 0.00 3.18
2698 3094 2.101582 CTCCCCAACCTCTATCTTCACG 59.898 54.545 0.00 0.00 0.00 4.35
2699 3095 1.139058 CCCCAACCTCTATCTTCACGG 59.861 57.143 0.00 0.00 0.00 4.94
2700 3096 1.139058 CCCAACCTCTATCTTCACGGG 59.861 57.143 0.00 0.00 0.00 5.28
2701 3097 1.473434 CCAACCTCTATCTTCACGGGC 60.473 57.143 0.00 0.00 0.00 6.13
2702 3098 1.482593 CAACCTCTATCTTCACGGGCT 59.517 52.381 0.00 0.00 0.00 5.19
2703 3099 1.115467 ACCTCTATCTTCACGGGCTG 58.885 55.000 0.00 0.00 0.00 4.85
2704 3100 0.390860 CCTCTATCTTCACGGGCTGG 59.609 60.000 0.00 0.00 0.00 4.85
2705 3101 0.390860 CTCTATCTTCACGGGCTGGG 59.609 60.000 0.00 0.00 0.00 4.45
2706 3102 0.032515 TCTATCTTCACGGGCTGGGA 60.033 55.000 0.00 0.00 0.00 4.37
2707 3103 0.390860 CTATCTTCACGGGCTGGGAG 59.609 60.000 0.00 0.00 0.00 4.30
2708 3104 1.048724 TATCTTCACGGGCTGGGAGG 61.049 60.000 0.33 0.33 0.00 4.30
2709 3105 4.785453 CTTCACGGGCTGGGAGGC 62.785 72.222 0.00 0.00 40.51 4.70
2726 3122 4.452733 CCGACCCGAGCTCAACCC 62.453 72.222 15.40 0.00 0.00 4.11
2727 3123 4.452733 CGACCCGAGCTCAACCCC 62.453 72.222 15.40 0.00 0.00 4.95
2728 3124 4.097361 GACCCGAGCTCAACCCCC 62.097 72.222 15.40 0.00 0.00 5.40
2729 3125 4.974438 ACCCGAGCTCAACCCCCA 62.974 66.667 15.40 0.00 0.00 4.96
2730 3126 3.411517 CCCGAGCTCAACCCCCAT 61.412 66.667 15.40 0.00 0.00 4.00
2731 3127 2.190578 CCGAGCTCAACCCCCATC 59.809 66.667 15.40 0.00 0.00 3.51
2732 3128 2.190578 CGAGCTCAACCCCCATCC 59.809 66.667 15.40 0.00 0.00 3.51
2733 3129 2.190578 GAGCTCAACCCCCATCCG 59.809 66.667 9.40 0.00 0.00 4.18
2734 3130 3.406595 GAGCTCAACCCCCATCCGG 62.407 68.421 9.40 0.00 0.00 5.14
2736 3132 4.856801 CTCAACCCCCATCCGGCG 62.857 72.222 0.00 0.00 0.00 6.46
2743 3139 4.609018 CCCATCCGGCGCGAGATT 62.609 66.667 12.10 0.00 0.00 2.40
2744 3140 2.588877 CCATCCGGCGCGAGATTT 60.589 61.111 12.10 0.00 0.00 2.17
2745 3141 2.628106 CATCCGGCGCGAGATTTG 59.372 61.111 12.10 0.00 0.00 2.32
2746 3142 1.882625 CATCCGGCGCGAGATTTGA 60.883 57.895 12.10 0.00 0.00 2.69
2747 3143 1.883084 ATCCGGCGCGAGATTTGAC 60.883 57.895 12.10 0.00 0.00 3.18
2748 3144 3.913573 CCGGCGCGAGATTTGACG 61.914 66.667 12.10 0.00 0.00 4.35
2749 3145 3.913573 CGGCGCGAGATTTGACGG 61.914 66.667 12.10 0.00 0.00 4.79
2750 3146 3.564027 GGCGCGAGATTTGACGGG 61.564 66.667 12.10 0.00 43.34 5.28
2751 3147 2.508439 GCGCGAGATTTGACGGGA 60.508 61.111 12.10 0.00 43.19 5.14
2752 3148 2.517450 GCGCGAGATTTGACGGGAG 61.517 63.158 12.10 0.00 43.19 4.30
2753 3149 1.878522 CGCGAGATTTGACGGGAGG 60.879 63.158 0.00 0.00 43.19 4.30
2754 3150 1.521681 GCGAGATTTGACGGGAGGG 60.522 63.158 0.00 0.00 0.00 4.30
2755 3151 1.956629 GCGAGATTTGACGGGAGGGA 61.957 60.000 0.00 0.00 0.00 4.20
2756 3152 0.179108 CGAGATTTGACGGGAGGGAC 60.179 60.000 0.00 0.00 0.00 4.46
2757 3153 0.902531 GAGATTTGACGGGAGGGACA 59.097 55.000 0.00 0.00 0.00 4.02
2758 3154 1.486726 GAGATTTGACGGGAGGGACAT 59.513 52.381 0.00 0.00 0.00 3.06
2759 3155 1.916181 AGATTTGACGGGAGGGACATT 59.084 47.619 0.00 0.00 0.00 2.71
2760 3156 2.308866 AGATTTGACGGGAGGGACATTT 59.691 45.455 0.00 0.00 0.00 2.32
2761 3157 2.194201 TTTGACGGGAGGGACATTTC 57.806 50.000 0.00 0.00 0.00 2.17
2762 3158 0.326927 TTGACGGGAGGGACATTTCC 59.673 55.000 0.00 0.00 41.95 3.13
2763 3159 1.153429 GACGGGAGGGACATTTCCG 60.153 63.158 0.00 0.00 43.94 4.30
2764 3160 2.513897 CGGGAGGGACATTTCCGC 60.514 66.667 0.00 0.00 43.94 5.54
2765 3161 2.513897 GGGAGGGACATTTCCGCG 60.514 66.667 0.00 0.00 43.94 6.46
2766 3162 3.202706 GGAGGGACATTTCCGCGC 61.203 66.667 0.00 0.00 43.94 6.86
2767 3163 3.564027 GAGGGACATTTCCGCGCG 61.564 66.667 25.67 25.67 43.94 6.86
2773 3169 4.114997 CATTTCCGCGCGCCCTTT 62.115 61.111 27.36 4.28 0.00 3.11
2774 3170 3.810896 ATTTCCGCGCGCCCTTTC 61.811 61.111 27.36 0.00 0.00 2.62
2783 3179 4.426313 CGCCCTTTCCCACTCCCC 62.426 72.222 0.00 0.00 0.00 4.81
2784 3180 4.426313 GCCCTTTCCCACTCCCCG 62.426 72.222 0.00 0.00 0.00 5.73
2785 3181 4.426313 CCCTTTCCCACTCCCCGC 62.426 72.222 0.00 0.00 0.00 6.13
2786 3182 3.646715 CCTTTCCCACTCCCCGCA 61.647 66.667 0.00 0.00 0.00 5.69
2787 3183 2.359975 CTTTCCCACTCCCCGCAC 60.360 66.667 0.00 0.00 0.00 5.34
2788 3184 3.920093 CTTTCCCACTCCCCGCACC 62.920 68.421 0.00 0.00 0.00 5.01
2801 3197 4.740822 GCACCCTCCGCCACCATT 62.741 66.667 0.00 0.00 0.00 3.16
2802 3198 2.751436 CACCCTCCGCCACCATTG 60.751 66.667 0.00 0.00 0.00 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.056536 TGGTCAGAATTCAGAACTCGGAG 60.057 47.826 15.90 2.83 0.00 4.63
10 11 3.653344 TGTGGTCAGAATTCAGAACTCG 58.347 45.455 15.90 0.00 0.00 4.18
38 43 5.128171 ACACCATGGTACGTTCATACAGTAT 59.872 40.000 19.28 0.00 0.00 2.12
400 425 0.035439 GGAAAGTTCAGCCCATCGGA 60.035 55.000 0.00 0.00 0.00 4.55
576 601 0.179000 AGACATCGCCATCTTCACCC 59.821 55.000 0.00 0.00 0.00 4.61
594 619 3.156188 GTCTCTGACAGGCCGAAGGAG 62.156 61.905 1.81 3.27 41.05 3.69
620 645 3.391049 AGACCGCTCTTACAGTTCAAAC 58.609 45.455 0.00 0.00 0.00 2.93
625 650 3.093057 AGATGAGACCGCTCTTACAGTT 58.907 45.455 0.00 0.00 41.84 3.16
675 700 9.270640 CTCATTTCCTTAATTAGACTGATCTGG 57.729 37.037 4.49 0.00 36.29 3.86
676 701 8.772705 GCTCATTTCCTTAATTAGACTGATCTG 58.227 37.037 0.00 0.00 36.29 2.90
679 704 9.692325 AAAGCTCATTTCCTTAATTAGACTGAT 57.308 29.630 0.00 0.00 0.00 2.90
680 705 9.167311 GAAAGCTCATTTCCTTAATTAGACTGA 57.833 33.333 0.00 0.00 41.32 3.41
681 706 8.119226 CGAAAGCTCATTTCCTTAATTAGACTG 58.881 37.037 0.00 0.00 43.79 3.51
709 734 3.199677 CCCTGAATGCGTTCGGTTAATA 58.800 45.455 22.89 0.17 38.77 0.98
712 737 0.322322 ACCCTGAATGCGTTCGGTTA 59.678 50.000 22.89 1.89 38.77 2.85
714 739 1.072505 AACCCTGAATGCGTTCGGT 59.927 52.632 22.89 17.07 38.77 4.69
716 741 0.165944 GACAACCCTGAATGCGTTCG 59.834 55.000 13.81 8.52 37.15 3.95
725 750 1.073763 CTGGACATTGGACAACCCTGA 59.926 52.381 0.00 0.00 35.38 3.86
727 752 1.149101 ACTGGACATTGGACAACCCT 58.851 50.000 0.00 0.00 35.38 4.34
729 754 0.598065 GCACTGGACATTGGACAACC 59.402 55.000 0.00 0.00 0.00 3.77
730 755 1.317613 TGCACTGGACATTGGACAAC 58.682 50.000 0.00 0.00 0.00 3.32
731 756 2.291209 ATGCACTGGACATTGGACAA 57.709 45.000 0.00 0.00 0.00 3.18
732 757 2.356022 CCTATGCACTGGACATTGGACA 60.356 50.000 0.78 0.00 41.26 4.02
735 760 1.683943 CCCTATGCACTGGACATTGG 58.316 55.000 8.26 5.93 39.30 3.16
736 761 1.212688 TCCCCTATGCACTGGACATTG 59.787 52.381 8.26 0.00 0.00 2.82
737 762 1.595311 TCCCCTATGCACTGGACATT 58.405 50.000 8.26 0.00 0.00 2.71
738 763 1.595311 TTCCCCTATGCACTGGACAT 58.405 50.000 8.26 0.00 0.00 3.06
743 768 4.792068 TCCTTAATTTCCCCTATGCACTG 58.208 43.478 0.00 0.00 0.00 3.66
750 775 8.787818 ACAAATATGTCTCCTTAATTTCCCCTA 58.212 33.333 0.00 0.00 33.41 3.53
795 824 9.842775 TCTGAATGAAATCTAAGATAGCACATT 57.157 29.630 0.00 0.00 0.00 2.71
813 842 9.690913 ACAAAAAGGATTCATCTATCTGAATGA 57.309 29.630 4.17 0.00 44.00 2.57
859 888 7.855784 ATTCCCCTCTTCATTAACTGTTTTT 57.144 32.000 0.00 0.00 0.00 1.94
860 889 9.547279 AATATTCCCCTCTTCATTAACTGTTTT 57.453 29.630 0.00 0.00 0.00 2.43
862 891 9.628500 GTAATATTCCCCTCTTCATTAACTGTT 57.372 33.333 0.00 0.00 0.00 3.16
863 892 8.218488 GGTAATATTCCCCTCTTCATTAACTGT 58.782 37.037 0.00 0.00 0.00 3.55
864 893 7.665974 GGGTAATATTCCCCTCTTCATTAACTG 59.334 40.741 8.84 0.00 39.08 3.16
865 894 7.756614 GGGTAATATTCCCCTCTTCATTAACT 58.243 38.462 8.84 0.00 39.08 2.24
866 895 7.997773 GGGTAATATTCCCCTCTTCATTAAC 57.002 40.000 8.84 0.00 39.08 2.01
879 908 9.275572 TGTATAATACAGGGAGGGTAATATTCC 57.724 37.037 0.00 0.00 34.06 3.01
882 911 9.144298 CGATGTATAATACAGGGAGGGTAATAT 57.856 37.037 0.00 0.00 42.77 1.28
883 912 8.338493 TCGATGTATAATACAGGGAGGGTAATA 58.662 37.037 0.00 0.00 42.77 0.98
884 913 7.186972 TCGATGTATAATACAGGGAGGGTAAT 58.813 38.462 0.00 0.00 42.77 1.89
885 914 6.554784 TCGATGTATAATACAGGGAGGGTAA 58.445 40.000 0.00 0.00 42.77 2.85
886 915 6.143551 TCGATGTATAATACAGGGAGGGTA 57.856 41.667 0.00 0.00 42.77 3.69
887 916 5.006896 TCGATGTATAATACAGGGAGGGT 57.993 43.478 0.00 0.00 42.77 4.34
888 917 5.069251 GGATCGATGTATAATACAGGGAGGG 59.931 48.000 0.54 0.00 42.77 4.30
889 918 5.894393 AGGATCGATGTATAATACAGGGAGG 59.106 44.000 0.54 0.00 42.77 4.30
890 919 7.340743 AGAAGGATCGATGTATAATACAGGGAG 59.659 40.741 0.54 0.00 42.77 4.30
891 920 7.182760 AGAAGGATCGATGTATAATACAGGGA 58.817 38.462 0.54 0.00 42.77 4.20
892 921 7.411486 AGAAGGATCGATGTATAATACAGGG 57.589 40.000 0.54 0.00 42.77 4.45
893 922 8.523658 TCAAGAAGGATCGATGTATAATACAGG 58.476 37.037 0.54 0.00 42.77 4.00
894 923 9.566530 CTCAAGAAGGATCGATGTATAATACAG 57.433 37.037 0.54 0.00 42.77 2.74
912 941 6.535865 CAGATCTCTTCATTCACCTCAAGAAG 59.464 42.308 0.00 0.00 37.60 2.85
913 942 6.212187 TCAGATCTCTTCATTCACCTCAAGAA 59.788 38.462 0.00 0.00 0.00 2.52
914 943 5.718607 TCAGATCTCTTCATTCACCTCAAGA 59.281 40.000 0.00 0.00 0.00 3.02
915 944 5.975282 TCAGATCTCTTCATTCACCTCAAG 58.025 41.667 0.00 0.00 0.00 3.02
916 945 6.407865 GGATCAGATCTCTTCATTCACCTCAA 60.408 42.308 10.36 0.00 0.00 3.02
917 946 5.070180 GGATCAGATCTCTTCATTCACCTCA 59.930 44.000 10.36 0.00 0.00 3.86
918 947 5.070180 TGGATCAGATCTCTTCATTCACCTC 59.930 44.000 10.36 0.00 0.00 3.85
919 948 4.967442 TGGATCAGATCTCTTCATTCACCT 59.033 41.667 10.36 0.00 0.00 4.00
920 949 5.287674 TGGATCAGATCTCTTCATTCACC 57.712 43.478 10.36 0.00 0.00 4.02
921 950 6.203145 CACATGGATCAGATCTCTTCATTCAC 59.797 42.308 10.36 0.00 0.00 3.18
922 951 6.289064 CACATGGATCAGATCTCTTCATTCA 58.711 40.000 10.36 0.00 0.00 2.57
923 952 5.701750 CCACATGGATCAGATCTCTTCATTC 59.298 44.000 10.36 0.00 37.39 2.67
924 953 5.132312 ACCACATGGATCAGATCTCTTCATT 59.868 40.000 10.36 0.00 38.94 2.57
925 954 4.659368 ACCACATGGATCAGATCTCTTCAT 59.341 41.667 10.36 2.60 38.94 2.57
926 955 4.035814 ACCACATGGATCAGATCTCTTCA 58.964 43.478 10.36 0.21 38.94 3.02
927 956 4.344679 AGACCACATGGATCAGATCTCTTC 59.655 45.833 10.36 0.00 38.94 2.87
928 957 4.296912 AGACCACATGGATCAGATCTCTT 58.703 43.478 10.36 0.00 38.94 2.85
929 958 3.926198 AGACCACATGGATCAGATCTCT 58.074 45.455 10.36 0.75 38.94 3.10
930 959 4.686191 AAGACCACATGGATCAGATCTC 57.314 45.455 10.36 1.61 38.94 2.75
931 960 7.015680 ACTATAAGACCACATGGATCAGATCT 58.984 38.462 10.36 0.00 38.94 2.75
932 961 7.238486 ACTATAAGACCACATGGATCAGATC 57.762 40.000 4.53 1.18 38.94 2.75
933 962 7.290948 TGAACTATAAGACCACATGGATCAGAT 59.709 37.037 4.53 0.00 38.94 2.90
934 963 6.611236 TGAACTATAAGACCACATGGATCAGA 59.389 38.462 4.53 0.00 38.94 3.27
935 964 6.820335 TGAACTATAAGACCACATGGATCAG 58.180 40.000 4.53 0.00 38.94 2.90
936 965 6.686378 GCTGAACTATAAGACCACATGGATCA 60.686 42.308 4.53 0.00 38.94 2.92
937 966 5.698545 GCTGAACTATAAGACCACATGGATC 59.301 44.000 4.53 0.00 38.94 3.36
938 967 5.455326 GGCTGAACTATAAGACCACATGGAT 60.455 44.000 4.53 0.00 38.94 3.41
939 968 4.141711 GGCTGAACTATAAGACCACATGGA 60.142 45.833 4.53 0.00 38.94 3.41
940 969 4.130118 GGCTGAACTATAAGACCACATGG 58.870 47.826 0.00 0.00 42.17 3.66
941 970 4.769688 TGGCTGAACTATAAGACCACATG 58.230 43.478 0.00 0.00 0.00 3.21
942 971 4.684485 GCTGGCTGAACTATAAGACCACAT 60.684 45.833 0.00 0.00 0.00 3.21
943 972 3.369471 GCTGGCTGAACTATAAGACCACA 60.369 47.826 0.00 0.00 0.00 4.17
944 973 3.198872 GCTGGCTGAACTATAAGACCAC 58.801 50.000 0.00 0.00 0.00 4.16
945 974 2.837591 TGCTGGCTGAACTATAAGACCA 59.162 45.455 0.00 0.00 0.00 4.02
946 975 3.198872 GTGCTGGCTGAACTATAAGACC 58.801 50.000 0.00 0.00 0.00 3.85
947 976 3.861840 TGTGCTGGCTGAACTATAAGAC 58.138 45.455 4.00 0.00 0.00 3.01
948 977 4.253685 GTTGTGCTGGCTGAACTATAAGA 58.746 43.478 4.00 0.00 0.00 2.10
949 978 4.002982 TGTTGTGCTGGCTGAACTATAAG 58.997 43.478 4.00 0.00 0.00 1.73
950 979 4.014569 TGTTGTGCTGGCTGAACTATAA 57.985 40.909 4.00 0.00 0.00 0.98
951 980 3.694043 TGTTGTGCTGGCTGAACTATA 57.306 42.857 4.00 0.00 0.00 1.31
952 981 2.566833 TGTTGTGCTGGCTGAACTAT 57.433 45.000 4.00 0.00 0.00 2.12
953 982 2.553602 CAATGTTGTGCTGGCTGAACTA 59.446 45.455 4.00 0.00 0.00 2.24
954 983 1.338973 CAATGTTGTGCTGGCTGAACT 59.661 47.619 4.00 0.00 0.00 3.01
955 984 1.067516 ACAATGTTGTGCTGGCTGAAC 59.932 47.619 0.00 0.00 40.49 3.18
956 985 1.401761 ACAATGTTGTGCTGGCTGAA 58.598 45.000 0.00 0.00 40.49 3.02
957 986 1.879380 GTACAATGTTGTGCTGGCTGA 59.121 47.619 8.57 0.00 42.31 4.26
958 987 2.336554 GTACAATGTTGTGCTGGCTG 57.663 50.000 8.57 0.00 42.31 4.85
964 993 2.900122 ATGCGAGTACAATGTTGTGC 57.100 45.000 8.57 7.21 42.31 4.57
965 994 2.910482 GCAATGCGAGTACAATGTTGTG 59.090 45.455 8.57 0.00 42.31 3.33
966 995 2.551887 TGCAATGCGAGTACAATGTTGT 59.448 40.909 0.00 3.64 44.86 3.32
967 996 3.200294 TGCAATGCGAGTACAATGTTG 57.800 42.857 0.00 0.00 0.00 3.33
968 997 3.913548 TTGCAATGCGAGTACAATGTT 57.086 38.095 0.00 0.00 0.00 2.71
969 998 3.825308 CTTTGCAATGCGAGTACAATGT 58.175 40.909 0.00 0.00 0.00 2.71
970 999 2.595536 GCTTTGCAATGCGAGTACAATG 59.404 45.455 19.97 0.00 0.00 2.82
971 1000 2.489329 AGCTTTGCAATGCGAGTACAAT 59.511 40.909 26.01 8.30 34.59 2.71
972 1001 1.879380 AGCTTTGCAATGCGAGTACAA 59.121 42.857 26.01 0.00 34.59 2.41
973 1002 1.522668 AGCTTTGCAATGCGAGTACA 58.477 45.000 26.01 0.00 34.59 2.90
974 1003 2.160417 AGAAGCTTTGCAATGCGAGTAC 59.840 45.455 26.01 17.57 34.59 2.73
975 1004 2.426522 AGAAGCTTTGCAATGCGAGTA 58.573 42.857 26.01 0.00 34.59 2.59
976 1005 1.242076 AGAAGCTTTGCAATGCGAGT 58.758 45.000 26.01 17.67 34.59 4.18
977 1006 2.342910 AAGAAGCTTTGCAATGCGAG 57.657 45.000 26.01 11.04 34.59 5.03
978 1007 2.798976 AAAGAAGCTTTGCAATGCGA 57.201 40.000 26.01 0.00 34.59 5.10
979 1008 3.825308 TCTAAAGAAGCTTTGCAATGCG 58.175 40.909 26.01 13.60 34.59 4.73
980 1009 5.404946 TCATCTAAAGAAGCTTTGCAATGC 58.595 37.500 25.39 25.39 0.00 3.56
981 1010 7.878477 TTTCATCTAAAGAAGCTTTGCAATG 57.122 32.000 0.00 3.50 0.00 2.82
994 1023 8.674263 ATGAGCACCTTATCTTTCATCTAAAG 57.326 34.615 0.00 0.00 45.13 1.85
995 1024 7.716998 GGATGAGCACCTTATCTTTCATCTAAA 59.283 37.037 10.87 0.00 40.28 1.85
996 1025 7.071698 AGGATGAGCACCTTATCTTTCATCTAA 59.928 37.037 10.87 0.00 40.28 2.10
997 1026 6.556495 AGGATGAGCACCTTATCTTTCATCTA 59.444 38.462 10.87 0.00 40.28 1.98
998 1027 5.369110 AGGATGAGCACCTTATCTTTCATCT 59.631 40.000 10.87 0.00 40.28 2.90
999 1028 5.619220 AGGATGAGCACCTTATCTTTCATC 58.381 41.667 4.20 4.20 39.91 2.92
1000 1029 5.131642 TGAGGATGAGCACCTTATCTTTCAT 59.868 40.000 0.00 0.00 37.93 2.57
1001 1030 4.471025 TGAGGATGAGCACCTTATCTTTCA 59.529 41.667 0.00 0.00 37.93 2.69
1002 1031 4.813697 GTGAGGATGAGCACCTTATCTTTC 59.186 45.833 0.00 0.00 37.93 2.62
1003 1032 4.775236 GTGAGGATGAGCACCTTATCTTT 58.225 43.478 0.00 0.00 37.93 2.52
1004 1033 4.414337 GTGAGGATGAGCACCTTATCTT 57.586 45.455 0.00 0.00 37.93 2.40
1012 1041 1.451028 GCTGGGTGAGGATGAGCAC 60.451 63.158 0.00 0.00 0.00 4.40
1013 1042 1.907222 CTGCTGGGTGAGGATGAGCA 61.907 60.000 0.00 0.00 37.33 4.26
1072 1101 2.456119 GGATGCTGAACTCGCCGTG 61.456 63.158 0.00 0.00 0.00 4.94
1110 1139 4.832608 ACGGAGCCGGCGGAATTC 62.833 66.667 33.44 22.19 44.69 2.17
1123 1152 0.037303 ACGTAGAAGGAGGTGACGGA 59.963 55.000 0.00 0.00 37.83 4.69
1149 1179 3.492756 GCTCCAATCTCAATCGAAGTAGC 59.507 47.826 0.00 0.00 0.00 3.58
1161 1195 2.771089 TGTGTTCTGTGCTCCAATCTC 58.229 47.619 0.00 0.00 0.00 2.75
1167 1201 4.822026 ACTAAGTATGTGTTCTGTGCTCC 58.178 43.478 0.00 0.00 0.00 4.70
1201 1240 4.389890 AGCATCAGTCAGTCTCTGAATC 57.610 45.455 0.88 0.00 42.46 2.52
1202 1241 4.955450 AGTAGCATCAGTCAGTCTCTGAAT 59.045 41.667 0.88 0.00 42.46 2.57
1203 1242 4.339748 AGTAGCATCAGTCAGTCTCTGAA 58.660 43.478 0.88 0.00 42.46 3.02
1204 1243 3.961849 AGTAGCATCAGTCAGTCTCTGA 58.038 45.455 0.00 0.00 44.37 3.27
1205 1244 4.717233 AAGTAGCATCAGTCAGTCTCTG 57.283 45.455 0.00 0.00 0.00 3.35
1206 1245 7.264221 CAATTAAGTAGCATCAGTCAGTCTCT 58.736 38.462 0.00 0.00 0.00 3.10
1207 1246 6.478344 CCAATTAAGTAGCATCAGTCAGTCTC 59.522 42.308 0.00 0.00 0.00 3.36
1211 1250 6.676456 GCAACCAATTAAGTAGCATCAGTCAG 60.676 42.308 0.00 0.00 0.00 3.51
1539 1623 3.390521 CCAGTAGCTGCCGTCCCA 61.391 66.667 0.00 0.00 0.00 4.37
1540 1624 4.162690 CCCAGTAGCTGCCGTCCC 62.163 72.222 0.00 0.00 0.00 4.46
1541 1625 4.840005 GCCCAGTAGCTGCCGTCC 62.840 72.222 0.00 0.00 0.00 4.79
1661 1752 4.486503 CAGGAGAGCAGGCTGCCC 62.487 72.222 34.33 27.28 46.52 5.36
1691 1782 2.511600 CGGTTCATCCAGCGGTCC 60.512 66.667 0.00 0.00 33.97 4.46
1821 2012 4.430423 CGTTCTTCAGCCGCGTGC 62.430 66.667 4.92 8.57 41.71 5.34
1884 2090 1.352352 AGATGTGACCCAAGACCAAGG 59.648 52.381 0.00 0.00 0.00 3.61
1960 2167 9.543783 AGAATTCACCCTTATTATCGTTTACTC 57.456 33.333 8.44 0.00 0.00 2.59
1961 2168 9.901172 AAGAATTCACCCTTATTATCGTTTACT 57.099 29.630 8.44 0.00 0.00 2.24
2033 2294 2.892425 GCCGAGGCCGATTGACAG 60.892 66.667 1.97 0.00 38.22 3.51
2034 2295 3.371097 GAGCCGAGGCCGATTGACA 62.371 63.158 10.95 0.00 43.17 3.58
2036 2297 2.759973 AGAGCCGAGGCCGATTGA 60.760 61.111 10.95 0.00 43.17 2.57
2038 2299 1.690219 AATCAGAGCCGAGGCCGATT 61.690 55.000 10.95 13.14 43.17 3.34
2039 2300 1.690219 AAATCAGAGCCGAGGCCGAT 61.690 55.000 10.95 7.87 43.17 4.18
2040 2301 2.359169 AAATCAGAGCCGAGGCCGA 61.359 57.895 10.95 5.75 43.17 5.54
2041 2302 2.176273 CAAATCAGAGCCGAGGCCG 61.176 63.158 10.95 0.00 43.17 6.13
2042 2303 0.392998 TTCAAATCAGAGCCGAGGCC 60.393 55.000 10.95 0.00 43.17 5.19
2043 2304 1.673168 ATTCAAATCAGAGCCGAGGC 58.327 50.000 5.89 5.89 42.33 4.70
2044 2305 2.223433 GCAATTCAAATCAGAGCCGAGG 60.223 50.000 0.00 0.00 0.00 4.63
2045 2306 2.681848 AGCAATTCAAATCAGAGCCGAG 59.318 45.455 0.00 0.00 0.00 4.63
2046 2307 2.715046 AGCAATTCAAATCAGAGCCGA 58.285 42.857 0.00 0.00 0.00 5.54
2047 2308 3.498927 AAGCAATTCAAATCAGAGCCG 57.501 42.857 0.00 0.00 0.00 5.52
2048 2309 3.930848 CCAAAGCAATTCAAATCAGAGCC 59.069 43.478 0.00 0.00 0.00 4.70
2049 2310 4.813027 TCCAAAGCAATTCAAATCAGAGC 58.187 39.130 0.00 0.00 0.00 4.09
2050 2311 6.022163 ACTCCAAAGCAATTCAAATCAGAG 57.978 37.500 0.00 0.00 0.00 3.35
2051 2312 6.409524 AACTCCAAAGCAATTCAAATCAGA 57.590 33.333 0.00 0.00 0.00 3.27
2052 2313 5.344128 CGAACTCCAAAGCAATTCAAATCAG 59.656 40.000 0.00 0.00 0.00 2.90
2053 2314 5.221880 CGAACTCCAAAGCAATTCAAATCA 58.778 37.500 0.00 0.00 0.00 2.57
2054 2315 4.090498 GCGAACTCCAAAGCAATTCAAATC 59.910 41.667 0.00 0.00 0.00 2.17
2055 2316 3.989817 GCGAACTCCAAAGCAATTCAAAT 59.010 39.130 0.00 0.00 0.00 2.32
2056 2317 3.380142 GCGAACTCCAAAGCAATTCAAA 58.620 40.909 0.00 0.00 0.00 2.69
2113 2387 5.371115 ACATTTATTCACTGTTGTTCCGG 57.629 39.130 0.00 0.00 0.00 5.14
2136 2410 3.354467 ACTGTTGTTCCGGTGGTTAAAA 58.646 40.909 0.00 0.00 0.00 1.52
2137 2411 3.002038 ACTGTTGTTCCGGTGGTTAAA 57.998 42.857 0.00 0.00 0.00 1.52
2138 2412 2.713863 ACTGTTGTTCCGGTGGTTAA 57.286 45.000 0.00 0.00 0.00 2.01
2139 2413 2.964464 TCTACTGTTGTTCCGGTGGTTA 59.036 45.455 0.00 0.00 0.00 2.85
2140 2414 1.764134 TCTACTGTTGTTCCGGTGGTT 59.236 47.619 0.00 0.00 0.00 3.67
2142 2416 2.762535 ATCTACTGTTGTTCCGGTGG 57.237 50.000 0.00 0.00 0.00 4.61
2143 2417 3.435671 GGAAATCTACTGTTGTTCCGGTG 59.564 47.826 0.00 0.00 0.00 4.94
2144 2418 3.558533 GGGAAATCTACTGTTGTTCCGGT 60.559 47.826 0.00 0.00 38.93 5.28
2145 2419 3.007635 GGGAAATCTACTGTTGTTCCGG 58.992 50.000 0.00 0.00 38.93 5.14
2146 2420 3.939066 AGGGAAATCTACTGTTGTTCCG 58.061 45.455 5.87 0.00 38.93 4.30
2147 2421 4.700692 GGAAGGGAAATCTACTGTTGTTCC 59.299 45.833 3.98 3.98 37.59 3.62
2148 2422 5.412904 CAGGAAGGGAAATCTACTGTTGTTC 59.587 44.000 0.00 0.00 0.00 3.18
2149 2423 5.316987 CAGGAAGGGAAATCTACTGTTGTT 58.683 41.667 0.00 0.00 0.00 2.83
2150 2424 4.263506 CCAGGAAGGGAAATCTACTGTTGT 60.264 45.833 0.00 0.00 0.00 3.32
2151 2425 4.019321 TCCAGGAAGGGAAATCTACTGTTG 60.019 45.833 0.00 0.00 38.24 3.33
2152 2426 4.175962 TCCAGGAAGGGAAATCTACTGTT 58.824 43.478 0.00 0.00 38.24 3.16
2153 2427 3.803340 TCCAGGAAGGGAAATCTACTGT 58.197 45.455 0.00 0.00 38.24 3.55
2154 2428 4.226168 ACTTCCAGGAAGGGAAATCTACTG 59.774 45.833 29.55 4.61 45.87 2.74
2155 2429 4.439860 ACTTCCAGGAAGGGAAATCTACT 58.560 43.478 29.55 5.11 45.87 2.57
2156 2430 4.225267 TGACTTCCAGGAAGGGAAATCTAC 59.775 45.833 29.55 11.52 45.87 2.59
2157 2431 4.225267 GTGACTTCCAGGAAGGGAAATCTA 59.775 45.833 29.55 8.78 45.87 1.98
2204 2586 3.119316 AGCAACCGAAGTAGACTCATCAG 60.119 47.826 0.00 0.00 0.00 2.90
2205 2587 2.826128 AGCAACCGAAGTAGACTCATCA 59.174 45.455 0.00 0.00 0.00 3.07
2206 2588 3.182967 CAGCAACCGAAGTAGACTCATC 58.817 50.000 0.00 0.00 0.00 2.92
2207 2589 2.563179 ACAGCAACCGAAGTAGACTCAT 59.437 45.455 0.00 0.00 0.00 2.90
2208 2590 1.961394 ACAGCAACCGAAGTAGACTCA 59.039 47.619 0.00 0.00 0.00 3.41
2209 2591 2.597520 GACAGCAACCGAAGTAGACTC 58.402 52.381 0.00 0.00 0.00 3.36
2210 2592 1.068472 CGACAGCAACCGAAGTAGACT 60.068 52.381 0.00 0.00 0.00 3.24
2211 2593 1.335689 ACGACAGCAACCGAAGTAGAC 60.336 52.381 0.00 0.00 0.00 2.59
2212 2594 0.956633 ACGACAGCAACCGAAGTAGA 59.043 50.000 0.00 0.00 0.00 2.59
2218 2600 1.370778 CGTACACGACAGCAACCGA 60.371 57.895 0.00 0.00 43.02 4.69
2252 2634 3.379240 CAAATGAACGAACATGGTGCAA 58.621 40.909 0.00 0.00 0.00 4.08
2289 2683 2.043604 TAGGGCGGCAGATCATGTGG 62.044 60.000 12.47 0.00 0.00 4.17
2290 2684 0.179048 TTAGGGCGGCAGATCATGTG 60.179 55.000 12.47 0.00 0.00 3.21
2291 2685 0.546122 TTTAGGGCGGCAGATCATGT 59.454 50.000 12.47 0.00 0.00 3.21
2292 2686 1.679139 TTTTAGGGCGGCAGATCATG 58.321 50.000 12.47 0.00 0.00 3.07
2293 2687 2.435372 TTTTTAGGGCGGCAGATCAT 57.565 45.000 12.47 0.00 0.00 2.45
2305 2699 5.127519 TCACATGAATCTGCCCATTTTTAGG 59.872 40.000 0.00 0.00 0.00 2.69
2307 2701 5.716228 ACTCACATGAATCTGCCCATTTTTA 59.284 36.000 0.00 0.00 0.00 1.52
2308 2702 4.529377 ACTCACATGAATCTGCCCATTTTT 59.471 37.500 0.00 0.00 0.00 1.94
2317 2711 5.349817 ACGCTCTTAAACTCACATGAATCTG 59.650 40.000 0.00 0.00 0.00 2.90
2319 2713 5.786401 ACGCTCTTAAACTCACATGAATC 57.214 39.130 0.00 0.00 0.00 2.52
2379 2774 5.738619 ATACATTGGTGCATATAGTCCGA 57.261 39.130 0.00 0.00 0.00 4.55
2383 2778 8.390143 TCCCATTAATACATTGGTGCATATAGT 58.610 33.333 0.00 0.00 0.00 2.12
2390 2785 4.832266 TGGATCCCATTAATACATTGGTGC 59.168 41.667 9.90 0.00 0.00 5.01
2396 2791 6.544327 TTTCCCTGGATCCCATTAATACAT 57.456 37.500 9.90 0.00 30.82 2.29
2468 2864 1.402968 CACCAGTGCAATGATAGCCAC 59.597 52.381 17.16 0.00 0.00 5.01
2490 2886 2.798499 GCAATCATCATGCCACAAGAGC 60.798 50.000 0.00 0.00 37.85 4.09
2491 2887 2.688446 AGCAATCATCATGCCACAAGAG 59.312 45.455 0.00 0.00 44.91 2.85
2532 2928 3.935828 GGGTCTGCTAGAGTTGCTTTAAG 59.064 47.826 0.00 0.00 0.00 1.85
2537 2933 1.608717 CGGGGTCTGCTAGAGTTGCT 61.609 60.000 0.00 0.00 0.00 3.91
2538 2934 1.153549 CGGGGTCTGCTAGAGTTGC 60.154 63.158 0.00 0.00 0.00 4.17
2539 2935 1.153549 GCGGGGTCTGCTAGAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
2541 2937 1.192146 TTTGCGGGGTCTGCTAGAGT 61.192 55.000 0.00 0.00 0.00 3.24
2544 2940 1.635663 CGTTTTGCGGGGTCTGCTAG 61.636 60.000 0.30 0.00 36.85 3.42
2545 2941 1.669760 CGTTTTGCGGGGTCTGCTA 60.670 57.895 0.30 0.00 36.85 3.49
2546 2942 2.978010 CGTTTTGCGGGGTCTGCT 60.978 61.111 0.30 0.00 36.85 4.24
2547 2943 4.700365 GCGTTTTGCGGGGTCTGC 62.700 66.667 0.00 0.00 41.69 4.26
2565 2961 2.492560 GTTATTTTGCGGGCCGGG 59.507 61.111 29.48 0.00 0.00 5.73
2567 2963 1.431845 GAGGTTATTTTGCGGGCCG 59.568 57.895 24.35 24.35 0.00 6.13
2568 2964 0.968393 TGGAGGTTATTTTGCGGGCC 60.968 55.000 0.00 0.00 0.00 5.80
2569 2965 0.892063 TTGGAGGTTATTTTGCGGGC 59.108 50.000 0.00 0.00 0.00 6.13
2570 2966 3.885724 ATTTGGAGGTTATTTTGCGGG 57.114 42.857 0.00 0.00 0.00 6.13
2571 2967 3.370672 GCAATTTGGAGGTTATTTTGCGG 59.629 43.478 0.00 0.00 0.00 5.69
2572 2968 4.582441 GCAATTTGGAGGTTATTTTGCG 57.418 40.909 0.00 0.00 0.00 4.85
2574 2970 3.932089 CCCGCAATTTGGAGGTTATTTTG 59.068 43.478 0.00 0.00 0.00 2.44
2576 2972 2.093711 GCCCGCAATTTGGAGGTTATTT 60.094 45.455 0.00 0.00 0.00 1.40
2577 2973 1.480545 GCCCGCAATTTGGAGGTTATT 59.519 47.619 0.00 0.00 0.00 1.40
2578 2974 1.111277 GCCCGCAATTTGGAGGTTAT 58.889 50.000 0.00 0.00 0.00 1.89
2579 2975 0.968393 GGCCCGCAATTTGGAGGTTA 60.968 55.000 0.00 0.00 0.00 2.85
2580 2976 2.282783 GGCCCGCAATTTGGAGGTT 61.283 57.895 0.00 0.00 0.00 3.50
2582 2978 3.825611 CGGCCCGCAATTTGGAGG 61.826 66.667 0.00 0.00 0.00 4.30
2583 2979 3.825611 CCGGCCCGCAATTTGGAG 61.826 66.667 0.00 0.00 0.00 3.86
2607 3003 1.523758 GGTCTGGTCGTGCAGATTTT 58.476 50.000 0.00 0.00 0.00 1.82
2610 3006 2.660064 GGGGTCTGGTCGTGCAGAT 61.660 63.158 0.00 0.00 0.00 2.90
2611 3007 3.311110 GGGGTCTGGTCGTGCAGA 61.311 66.667 0.00 0.00 0.00 4.26
2612 3008 4.742201 CGGGGTCTGGTCGTGCAG 62.742 72.222 0.00 0.00 0.00 4.41
2615 3011 4.082523 ATGCGGGGTCTGGTCGTG 62.083 66.667 0.00 0.00 0.00 4.35
2616 3012 3.771160 GATGCGGGGTCTGGTCGT 61.771 66.667 0.00 0.00 0.00 4.34
2617 3013 4.530857 GGATGCGGGGTCTGGTCG 62.531 72.222 0.00 0.00 0.00 4.79
2618 3014 4.530857 CGGATGCGGGGTCTGGTC 62.531 72.222 0.00 0.00 0.00 4.02
2636 3032 3.874807 AATTTTTGCGGGCCGGTGC 62.875 57.895 29.48 11.91 0.00 5.01
2637 3033 0.882484 AAAATTTTTGCGGGCCGGTG 60.882 50.000 29.48 0.00 0.00 4.94
2638 3034 0.179043 AAAAATTTTTGCGGGCCGGT 60.179 45.000 29.48 0.00 0.00 5.28
2639 3035 0.236973 CAAAAATTTTTGCGGGCCGG 59.763 50.000 29.48 9.71 40.76 6.13
2640 3036 3.744198 CAAAAATTTTTGCGGGCCG 57.256 47.368 26.05 24.35 40.76 6.13
2648 3044 0.585838 CGCGCCCTGCAAAAATTTTT 59.414 45.000 10.41 10.41 46.97 1.94
2649 3045 1.227342 CCGCGCCCTGCAAAAATTTT 61.227 50.000 0.00 0.00 46.97 1.82
2650 3046 1.667510 CCGCGCCCTGCAAAAATTT 60.668 52.632 0.00 0.00 46.97 1.82
2651 3047 2.048316 CCGCGCCCTGCAAAAATT 60.048 55.556 0.00 0.00 46.97 1.82
2652 3048 4.740431 GCCGCGCCCTGCAAAAAT 62.740 61.111 0.00 0.00 46.97 1.82
2659 3055 3.401243 GAAGATTTGCCGCGCCCTG 62.401 63.158 0.00 0.00 0.00 4.45
2660 3056 3.134127 GAAGATTTGCCGCGCCCT 61.134 61.111 0.00 0.00 0.00 5.19
2661 3057 3.113386 GAGAAGATTTGCCGCGCCC 62.113 63.158 0.00 0.00 0.00 6.13
2662 3058 2.405191 GAGAAGATTTGCCGCGCC 59.595 61.111 0.00 0.00 0.00 6.53
2663 3059 2.405191 GGAGAAGATTTGCCGCGC 59.595 61.111 0.00 0.00 0.00 6.86
2664 3060 2.472909 GGGGAGAAGATTTGCCGCG 61.473 63.158 0.00 0.00 0.00 6.46
2665 3061 0.965363 TTGGGGAGAAGATTTGCCGC 60.965 55.000 0.00 0.00 0.00 6.53
2666 3062 0.811281 GTTGGGGAGAAGATTTGCCG 59.189 55.000 0.00 0.00 0.00 5.69
2667 3063 1.186200 GGTTGGGGAGAAGATTTGCC 58.814 55.000 0.00 0.00 0.00 4.52
2668 3064 2.095461 GAGGTTGGGGAGAAGATTTGC 58.905 52.381 0.00 0.00 0.00 3.68
2669 3065 3.728385 AGAGGTTGGGGAGAAGATTTG 57.272 47.619 0.00 0.00 0.00 2.32
2670 3066 5.292815 AGATAGAGGTTGGGGAGAAGATTT 58.707 41.667 0.00 0.00 0.00 2.17
2671 3067 4.901927 AGATAGAGGTTGGGGAGAAGATT 58.098 43.478 0.00 0.00 0.00 2.40
2672 3068 4.567987 AGATAGAGGTTGGGGAGAAGAT 57.432 45.455 0.00 0.00 0.00 2.40
2673 3069 4.264850 TGAAGATAGAGGTTGGGGAGAAGA 60.265 45.833 0.00 0.00 0.00 2.87
2674 3070 4.033709 TGAAGATAGAGGTTGGGGAGAAG 58.966 47.826 0.00 0.00 0.00 2.85
2675 3071 3.775316 GTGAAGATAGAGGTTGGGGAGAA 59.225 47.826 0.00 0.00 0.00 2.87
2676 3072 3.375699 GTGAAGATAGAGGTTGGGGAGA 58.624 50.000 0.00 0.00 0.00 3.71
2677 3073 2.101582 CGTGAAGATAGAGGTTGGGGAG 59.898 54.545 0.00 0.00 0.00 4.30
2678 3074 2.108168 CGTGAAGATAGAGGTTGGGGA 58.892 52.381 0.00 0.00 0.00 4.81
2679 3075 1.139058 CCGTGAAGATAGAGGTTGGGG 59.861 57.143 0.00 0.00 0.00 4.96
2680 3076 1.139058 CCCGTGAAGATAGAGGTTGGG 59.861 57.143 0.00 0.00 0.00 4.12
2681 3077 1.473434 GCCCGTGAAGATAGAGGTTGG 60.473 57.143 0.00 0.00 0.00 3.77
2682 3078 1.482593 AGCCCGTGAAGATAGAGGTTG 59.517 52.381 0.00 0.00 0.00 3.77
2683 3079 1.482593 CAGCCCGTGAAGATAGAGGTT 59.517 52.381 0.00 0.00 0.00 3.50
2684 3080 1.115467 CAGCCCGTGAAGATAGAGGT 58.885 55.000 0.00 0.00 0.00 3.85
2685 3081 0.390860 CCAGCCCGTGAAGATAGAGG 59.609 60.000 0.00 0.00 0.00 3.69
2686 3082 0.390860 CCCAGCCCGTGAAGATAGAG 59.609 60.000 0.00 0.00 0.00 2.43
2687 3083 0.032515 TCCCAGCCCGTGAAGATAGA 60.033 55.000 0.00 0.00 0.00 1.98
2688 3084 0.390860 CTCCCAGCCCGTGAAGATAG 59.609 60.000 0.00 0.00 0.00 2.08
2689 3085 1.048724 CCTCCCAGCCCGTGAAGATA 61.049 60.000 0.00 0.00 0.00 1.98
2690 3086 2.370445 CCTCCCAGCCCGTGAAGAT 61.370 63.158 0.00 0.00 0.00 2.40
2691 3087 3.003173 CCTCCCAGCCCGTGAAGA 61.003 66.667 0.00 0.00 0.00 2.87
2692 3088 4.785453 GCCTCCCAGCCCGTGAAG 62.785 72.222 0.00 0.00 0.00 3.02
2709 3105 4.452733 GGGTTGAGCTCGGGTCGG 62.453 72.222 9.64 0.00 32.15 4.79
2710 3106 4.452733 GGGGTTGAGCTCGGGTCG 62.453 72.222 9.64 0.00 32.15 4.79
2711 3107 4.097361 GGGGGTTGAGCTCGGGTC 62.097 72.222 9.64 0.00 0.00 4.46
2712 3108 4.974438 TGGGGGTTGAGCTCGGGT 62.974 66.667 9.64 0.00 0.00 5.28
2713 3109 3.406595 GATGGGGGTTGAGCTCGGG 62.407 68.421 9.64 0.00 0.00 5.14
2714 3110 2.190578 GATGGGGGTTGAGCTCGG 59.809 66.667 9.64 0.00 0.00 4.63
2715 3111 2.190578 GGATGGGGGTTGAGCTCG 59.809 66.667 9.64 0.00 0.00 5.03
2716 3112 2.190578 CGGATGGGGGTTGAGCTC 59.809 66.667 6.82 6.82 0.00 4.09
2717 3113 3.411517 CCGGATGGGGGTTGAGCT 61.412 66.667 0.00 0.00 0.00 4.09
2719 3115 4.856801 CGCCGGATGGGGGTTGAG 62.857 72.222 5.05 0.00 44.23 3.02
2726 3122 4.609018 AATCTCGCGCCGGATGGG 62.609 66.667 5.05 5.03 39.58 4.00
2727 3123 2.588877 AAATCTCGCGCCGGATGG 60.589 61.111 5.05 0.00 38.77 3.51
2728 3124 1.882625 TCAAATCTCGCGCCGGATG 60.883 57.895 5.05 0.00 0.00 3.51
2729 3125 1.883084 GTCAAATCTCGCGCCGGAT 60.883 57.895 5.05 2.46 0.00 4.18
2730 3126 2.508439 GTCAAATCTCGCGCCGGA 60.508 61.111 5.05 0.00 0.00 5.14
2731 3127 3.913573 CGTCAAATCTCGCGCCGG 61.914 66.667 0.00 0.00 0.00 6.13
2732 3128 3.913573 CCGTCAAATCTCGCGCCG 61.914 66.667 0.00 0.00 0.00 6.46
2733 3129 3.564027 CCCGTCAAATCTCGCGCC 61.564 66.667 0.00 0.00 0.00 6.53
2734 3130 2.508439 TCCCGTCAAATCTCGCGC 60.508 61.111 0.00 0.00 0.00 6.86
2735 3131 1.878522 CCTCCCGTCAAATCTCGCG 60.879 63.158 0.00 0.00 0.00 5.87
2736 3132 1.521681 CCCTCCCGTCAAATCTCGC 60.522 63.158 0.00 0.00 0.00 5.03
2737 3133 0.179108 GTCCCTCCCGTCAAATCTCG 60.179 60.000 0.00 0.00 0.00 4.04
2738 3134 0.902531 TGTCCCTCCCGTCAAATCTC 59.097 55.000 0.00 0.00 0.00 2.75
2739 3135 1.584724 ATGTCCCTCCCGTCAAATCT 58.415 50.000 0.00 0.00 0.00 2.40
2740 3136 2.420058 AATGTCCCTCCCGTCAAATC 57.580 50.000 0.00 0.00 0.00 2.17
2741 3137 2.620627 GGAAATGTCCCTCCCGTCAAAT 60.621 50.000 0.00 0.00 38.08 2.32
2742 3138 1.271707 GGAAATGTCCCTCCCGTCAAA 60.272 52.381 0.00 0.00 38.08 2.69
2743 3139 0.326927 GGAAATGTCCCTCCCGTCAA 59.673 55.000 0.00 0.00 38.08 3.18
2744 3140 1.895020 CGGAAATGTCCCTCCCGTCA 61.895 60.000 0.00 0.00 41.44 4.35
2745 3141 1.153429 CGGAAATGTCCCTCCCGTC 60.153 63.158 0.00 0.00 41.44 4.79
2746 3142 2.987125 CGGAAATGTCCCTCCCGT 59.013 61.111 0.00 0.00 41.44 5.28
2747 3143 2.513897 GCGGAAATGTCCCTCCCG 60.514 66.667 0.00 0.00 41.44 5.14
2748 3144 2.513897 CGCGGAAATGTCCCTCCC 60.514 66.667 0.00 0.00 41.44 4.30
2749 3145 3.202706 GCGCGGAAATGTCCCTCC 61.203 66.667 8.83 0.00 41.44 4.30
2750 3146 3.564027 CGCGCGGAAATGTCCCTC 61.564 66.667 24.84 0.00 41.44 4.30
2756 3152 4.114997 AAAGGGCGCGCGGAAATG 62.115 61.111 33.06 1.90 0.00 2.32
2757 3153 3.810896 GAAAGGGCGCGCGGAAAT 61.811 61.111 33.06 10.05 0.00 2.17
2766 3162 4.426313 GGGGAGTGGGAAAGGGCG 62.426 72.222 0.00 0.00 0.00 6.13
2767 3163 4.426313 CGGGGAGTGGGAAAGGGC 62.426 72.222 0.00 0.00 0.00 5.19
2768 3164 4.426313 GCGGGGAGTGGGAAAGGG 62.426 72.222 0.00 0.00 0.00 3.95
2769 3165 3.646715 TGCGGGGAGTGGGAAAGG 61.647 66.667 0.00 0.00 0.00 3.11
2770 3166 2.359975 GTGCGGGGAGTGGGAAAG 60.360 66.667 0.00 0.00 0.00 2.62
2771 3167 3.961414 GGTGCGGGGAGTGGGAAA 61.961 66.667 0.00 0.00 0.00 3.13
2784 3180 4.740822 AATGGTGGCGGAGGGTGC 62.741 66.667 0.00 0.00 0.00 5.01
2785 3181 2.751436 CAATGGTGGCGGAGGGTG 60.751 66.667 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.