Multiple sequence alignment - TraesCS7D01G057400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G057400 chr7D 100.000 3834 0 0 1 3834 30846063 30842230 0.000000e+00 7081.0
1 TraesCS7D01G057400 chr7D 80.323 310 41 16 3368 3670 135351198 135351494 2.320000e-52 217.0
2 TraesCS7D01G057400 chr7D 92.754 69 5 0 2676 2744 30843345 30843277 2.440000e-17 100.0
3 TraesCS7D01G057400 chr7D 92.754 69 5 0 2719 2787 30843388 30843320 2.440000e-17 100.0
4 TraesCS7D01G057400 chr4A 87.234 2068 150 51 700 2675 697946947 697948992 0.000000e+00 2252.0
5 TraesCS7D01G057400 chr4A 93.728 558 31 2 3259 3815 697949593 697950147 0.000000e+00 833.0
6 TraesCS7D01G057400 chr4A 92.832 558 38 2 3259 3815 698037384 698037940 0.000000e+00 808.0
7 TraesCS7D01G057400 chr4A 91.219 558 37 4 2728 3274 697948978 697949534 0.000000e+00 749.0
8 TraesCS7D01G057400 chr4A 87.590 556 55 8 2719 3262 698036761 698037314 1.940000e-177 632.0
9 TraesCS7D01G057400 chr4A 79.381 873 125 25 1915 2748 698035977 698036833 7.190000e-157 564.0
10 TraesCS7D01G057400 chr4A 84.916 358 46 8 1456 1812 698024358 698024708 4.710000e-94 355.0
11 TraesCS7D01G057400 chr4A 88.235 119 10 2 1806 1924 698034622 698034736 5.160000e-29 139.0
12 TraesCS7D01G057400 chr4A 84.956 113 17 0 1017 1129 631494263 631494375 8.700000e-22 115.0
13 TraesCS7D01G057400 chr4A 93.548 62 4 0 2683 2744 697948976 697949037 4.080000e-15 93.5
14 TraesCS7D01G057400 chr7A 89.915 1527 124 12 697 2204 31107691 31106176 0.000000e+00 1940.0
15 TraesCS7D01G057400 chr7A 89.689 1028 62 14 2240 3250 31106173 31105173 0.000000e+00 1271.0
16 TraesCS7D01G057400 chr7A 94.794 557 28 1 3259 3815 31105088 31104533 0.000000e+00 867.0
17 TraesCS7D01G057400 chr7A 74.589 1582 242 97 887 2425 134481405 134482869 7.240000e-152 547.0
18 TraesCS7D01G057400 chr7A 82.705 451 59 14 3368 3813 134485680 134486116 2.160000e-102 383.0
19 TraesCS7D01G057400 chr7A 77.692 390 49 15 2747 3112 134483007 134483382 1.810000e-48 204.0
20 TraesCS7D01G057400 chr7A 100.000 57 0 0 2731 2787 31105726 31105670 5.240000e-19 106.0
21 TraesCS7D01G057400 chr7A 88.406 69 8 0 2676 2744 31105695 31105627 2.450000e-12 84.2
22 TraesCS7D01G057400 chr7B 75.340 1322 202 72 999 2303 97182122 97183336 4.390000e-144 521.0
23 TraesCS7D01G057400 chr3A 86.207 145 17 2 994 1138 746204921 746204780 1.840000e-33 154.0
24 TraesCS7D01G057400 chr3B 84.516 155 21 2 990 1144 829054303 829054454 2.390000e-32 150.0
25 TraesCS7D01G057400 chr3D 81.699 153 25 2 990 1142 611304210 611304359 1.450000e-24 124.0
26 TraesCS7D01G057400 chr5B 87.778 90 9 2 1017 1105 679379405 679379317 1.880000e-18 104.0
27 TraesCS7D01G057400 chr5D 100.000 29 0 0 3806 3834 558380107 558380135 2.000000e-03 54.7
28 TraesCS7D01G057400 chr1B 100.000 28 0 0 3807 3834 526264605 526264632 7.000000e-03 52.8
29 TraesCS7D01G057400 chr1B 100.000 28 0 0 3807 3834 562192220 562192193 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G057400 chr7D 30842230 30846063 3833 True 2427.000 7081 95.169333 1 3834 3 chr7D.!!$R1 3833
1 TraesCS7D01G057400 chr4A 697946947 697950147 3200 False 981.875 2252 91.432250 700 3815 4 chr4A.!!$F3 3115
2 TraesCS7D01G057400 chr4A 698034622 698037940 3318 False 535.750 808 87.009500 1806 3815 4 chr4A.!!$F4 2009
3 TraesCS7D01G057400 chr7A 31104533 31107691 3158 True 853.640 1940 92.560800 697 3815 5 chr7A.!!$R1 3118
4 TraesCS7D01G057400 chr7A 134481405 134486116 4711 False 378.000 547 78.328667 887 3813 3 chr7A.!!$F1 2926
5 TraesCS7D01G057400 chr7B 97182122 97183336 1214 False 521.000 521 75.340000 999 2303 1 chr7B.!!$F1 1304

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
691 692 0.031414 GTGGCCCCTACTCCCTAGAA 60.031 60.0 0.0 0.0 0.00 2.10 F
813 814 0.246360 ATGCACCGATCACGTTCAGA 59.754 50.0 0.0 0.0 37.88 3.27 F
882 890 0.254178 CATGTCCTGCTAACTGCCCT 59.746 55.0 0.0 0.0 42.00 5.19 F
2599 4003 0.251341 TTCCCTTTGAGCCTCCTTGC 60.251 55.0 0.0 0.0 0.00 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1539 1603 0.897621 TCAAATGCTCGCTGGAGAGA 59.102 50.000 5.57 0.00 43.27 3.10 R
2587 3991 0.901827 TACAATCGCAAGGAGGCTCA 59.098 50.000 17.69 0.00 38.47 4.26 R
2680 4086 3.199508 AGACATAACAGAGGCTGCATTCT 59.800 43.478 0.50 0.61 34.37 2.40 R
3815 7312 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.043131 AACCACCCCTCATATGCCT 57.957 52.632 0.00 0.00 0.00 4.75
19 20 0.552848 AACCACCCCTCATATGCCTG 59.447 55.000 0.00 0.00 0.00 4.85
20 21 0.624500 ACCACCCCTCATATGCCTGT 60.625 55.000 0.00 0.00 0.00 4.00
21 22 0.179009 CCACCCCTCATATGCCTGTG 60.179 60.000 0.00 3.08 0.00 3.66
22 23 0.179009 CACCCCTCATATGCCTGTGG 60.179 60.000 0.00 0.00 0.00 4.17
23 24 1.355718 ACCCCTCATATGCCTGTGGG 61.356 60.000 0.00 9.90 45.56 4.61
33 34 2.357517 CCTGTGGGCTGTGACGAC 60.358 66.667 0.00 0.00 0.00 4.34
34 35 2.357517 CTGTGGGCTGTGACGACC 60.358 66.667 0.00 0.00 0.00 4.79
35 36 2.842462 TGTGGGCTGTGACGACCT 60.842 61.111 0.00 0.00 31.45 3.85
36 37 2.048127 GTGGGCTGTGACGACCTC 60.048 66.667 0.00 0.00 31.45 3.85
37 38 2.523168 TGGGCTGTGACGACCTCA 60.523 61.111 0.00 0.00 31.45 3.86
38 39 2.262915 GGGCTGTGACGACCTCAG 59.737 66.667 0.00 0.00 38.91 3.35
39 40 2.262915 GGCTGTGACGACCTCAGG 59.737 66.667 0.00 0.00 36.99 3.86
40 41 2.276116 GGCTGTGACGACCTCAGGA 61.276 63.158 0.00 0.00 36.99 3.86
41 42 1.080434 GCTGTGACGACCTCAGGAC 60.080 63.158 0.00 0.00 36.99 3.85
42 43 1.587054 CTGTGACGACCTCAGGACC 59.413 63.158 0.00 0.00 33.85 4.46
43 44 0.896019 CTGTGACGACCTCAGGACCT 60.896 60.000 0.00 0.00 33.85 3.85
44 45 1.179174 TGTGACGACCTCAGGACCTG 61.179 60.000 15.99 15.99 0.00 4.00
45 46 1.153061 TGACGACCTCAGGACCTGT 59.847 57.895 21.06 1.67 32.61 4.00
46 47 1.179174 TGACGACCTCAGGACCTGTG 61.179 60.000 21.06 18.07 32.61 3.66
47 48 1.152525 ACGACCTCAGGACCTGTGT 60.153 57.895 21.06 18.27 32.61 3.72
48 49 0.759436 ACGACCTCAGGACCTGTGTT 60.759 55.000 21.06 7.39 32.61 3.32
49 50 0.319900 CGACCTCAGGACCTGTGTTG 60.320 60.000 21.06 17.63 32.61 3.33
50 51 0.603975 GACCTCAGGACCTGTGTTGC 60.604 60.000 21.06 6.59 32.61 4.17
51 52 1.302832 CCTCAGGACCTGTGTTGCC 60.303 63.158 21.06 0.00 32.61 4.52
52 53 1.451504 CTCAGGACCTGTGTTGCCA 59.548 57.895 21.06 0.00 32.61 4.92
53 54 0.886490 CTCAGGACCTGTGTTGCCAC 60.886 60.000 21.06 0.00 42.19 5.01
54 55 2.111043 AGGACCTGTGTTGCCACG 59.889 61.111 0.00 0.00 44.92 4.94
55 56 2.978010 GGACCTGTGTTGCCACGG 60.978 66.667 0.00 0.00 44.92 4.94
56 57 3.660111 GACCTGTGTTGCCACGGC 61.660 66.667 0.00 0.00 45.06 5.68
63 64 4.476752 GTTGCCACGGCGGGGATA 62.477 66.667 36.08 17.93 45.51 2.59
64 65 3.718395 TTGCCACGGCGGGGATAA 61.718 61.111 36.08 23.16 45.51 1.75
65 66 3.690685 TTGCCACGGCGGGGATAAG 62.691 63.158 36.08 4.86 45.51 1.73
66 67 4.929707 GCCACGGCGGGGATAAGG 62.930 72.222 36.08 12.22 34.06 2.69
67 68 4.929707 CCACGGCGGGGATAAGGC 62.930 72.222 27.43 0.00 0.00 4.35
68 69 4.929707 CACGGCGGGGATAAGGCC 62.930 72.222 13.24 0.00 43.42 5.19
71 72 3.490851 GGCGGGGATAAGGCCATA 58.509 61.111 5.01 0.00 46.13 2.74
72 73 1.765074 GGCGGGGATAAGGCCATAA 59.235 57.895 5.01 0.00 46.13 1.90
73 74 0.322546 GGCGGGGATAAGGCCATAAG 60.323 60.000 5.01 0.00 46.13 1.73
74 75 0.400594 GCGGGGATAAGGCCATAAGT 59.599 55.000 5.01 0.00 0.00 2.24
75 76 1.626825 GCGGGGATAAGGCCATAAGTA 59.373 52.381 5.01 0.00 0.00 2.24
76 77 2.238898 GCGGGGATAAGGCCATAAGTAT 59.761 50.000 5.01 0.00 0.00 2.12
77 78 3.308188 GCGGGGATAAGGCCATAAGTATT 60.308 47.826 5.01 0.00 0.00 1.89
78 79 4.809691 GCGGGGATAAGGCCATAAGTATTT 60.810 45.833 5.01 0.00 0.00 1.40
79 80 5.572066 GCGGGGATAAGGCCATAAGTATTTA 60.572 44.000 5.01 0.00 0.00 1.40
80 81 6.659824 CGGGGATAAGGCCATAAGTATTTAT 58.340 40.000 5.01 0.00 0.00 1.40
81 82 7.116736 CGGGGATAAGGCCATAAGTATTTATT 58.883 38.462 5.01 0.00 0.00 1.40
82 83 7.614192 CGGGGATAAGGCCATAAGTATTTATTT 59.386 37.037 5.01 0.00 0.00 1.40
83 84 9.321532 GGGGATAAGGCCATAAGTATTTATTTT 57.678 33.333 5.01 0.00 0.00 1.82
88 89 8.947055 AAGGCCATAAGTATTTATTTTTGCTG 57.053 30.769 5.01 0.00 0.00 4.41
89 90 6.986231 AGGCCATAAGTATTTATTTTTGCTGC 59.014 34.615 5.01 0.00 0.00 5.25
90 91 6.760770 GGCCATAAGTATTTATTTTTGCTGCA 59.239 34.615 0.00 0.00 0.00 4.41
91 92 7.442062 GGCCATAAGTATTTATTTTTGCTGCAT 59.558 33.333 1.84 0.00 0.00 3.96
92 93 8.490355 GCCATAAGTATTTATTTTTGCTGCATC 58.510 33.333 1.84 0.00 0.00 3.91
93 94 8.693504 CCATAAGTATTTATTTTTGCTGCATCG 58.306 33.333 1.84 0.00 0.00 3.84
94 95 6.573617 AAGTATTTATTTTTGCTGCATCGC 57.426 33.333 1.84 0.00 0.00 4.58
95 96 5.043248 AGTATTTATTTTTGCTGCATCGCC 58.957 37.500 1.84 0.00 0.00 5.54
96 97 1.906757 TTATTTTTGCTGCATCGCCG 58.093 45.000 1.84 0.00 0.00 6.46
97 98 0.100325 TATTTTTGCTGCATCGCCGG 59.900 50.000 1.84 0.00 0.00 6.13
98 99 3.790899 TATTTTTGCTGCATCGCCGGC 62.791 52.381 19.07 19.07 0.00 6.13
106 107 4.585526 CATCGCCGGCTCCGCTAA 62.586 66.667 26.68 0.82 38.24 3.09
107 108 4.587189 ATCGCCGGCTCCGCTAAC 62.587 66.667 26.68 0.00 38.24 2.34
110 111 3.195698 GCCGGCTCCGCTAACAAG 61.196 66.667 22.15 0.00 38.24 3.16
111 112 2.577059 CCGGCTCCGCTAACAAGA 59.423 61.111 2.18 0.00 38.24 3.02
112 113 1.144057 CCGGCTCCGCTAACAAGAT 59.856 57.895 2.18 0.00 38.24 2.40
113 114 1.154205 CCGGCTCCGCTAACAAGATG 61.154 60.000 2.18 0.00 38.24 2.90
114 115 0.179111 CGGCTCCGCTAACAAGATGA 60.179 55.000 0.00 0.00 0.00 2.92
115 116 1.576356 GGCTCCGCTAACAAGATGAG 58.424 55.000 0.00 0.00 0.00 2.90
116 117 1.576356 GCTCCGCTAACAAGATGAGG 58.424 55.000 0.00 0.00 0.00 3.86
117 118 1.137086 GCTCCGCTAACAAGATGAGGA 59.863 52.381 0.00 0.00 0.00 3.71
118 119 2.815478 CTCCGCTAACAAGATGAGGAC 58.185 52.381 0.00 0.00 0.00 3.85
119 120 2.166459 CTCCGCTAACAAGATGAGGACA 59.834 50.000 0.00 0.00 0.00 4.02
120 121 2.094182 TCCGCTAACAAGATGAGGACAC 60.094 50.000 0.00 0.00 0.00 3.67
121 122 2.271800 CGCTAACAAGATGAGGACACC 58.728 52.381 0.00 0.00 0.00 4.16
122 123 2.353704 CGCTAACAAGATGAGGACACCA 60.354 50.000 0.00 0.00 0.00 4.17
123 124 3.265791 GCTAACAAGATGAGGACACCAG 58.734 50.000 0.00 0.00 0.00 4.00
124 125 3.055819 GCTAACAAGATGAGGACACCAGA 60.056 47.826 0.00 0.00 0.00 3.86
125 126 4.563580 GCTAACAAGATGAGGACACCAGAA 60.564 45.833 0.00 0.00 0.00 3.02
126 127 4.647564 AACAAGATGAGGACACCAGAAT 57.352 40.909 0.00 0.00 0.00 2.40
127 128 4.213564 ACAAGATGAGGACACCAGAATC 57.786 45.455 0.00 0.00 0.00 2.52
128 129 3.584406 ACAAGATGAGGACACCAGAATCA 59.416 43.478 0.00 0.00 0.00 2.57
129 130 4.226846 ACAAGATGAGGACACCAGAATCAT 59.773 41.667 0.00 0.00 33.44 2.45
130 131 4.686191 AGATGAGGACACCAGAATCATC 57.314 45.455 5.55 5.55 44.20 2.92
131 132 4.035814 AGATGAGGACACCAGAATCATCA 58.964 43.478 14.02 0.72 45.56 3.07
132 133 4.472470 AGATGAGGACACCAGAATCATCAA 59.528 41.667 14.02 0.00 45.56 2.57
133 134 3.942829 TGAGGACACCAGAATCATCAAC 58.057 45.455 0.00 0.00 33.03 3.18
134 135 3.584406 TGAGGACACCAGAATCATCAACT 59.416 43.478 0.00 0.00 33.03 3.16
135 136 4.042062 TGAGGACACCAGAATCATCAACTT 59.958 41.667 0.00 0.00 33.03 2.66
136 137 5.248248 TGAGGACACCAGAATCATCAACTTA 59.752 40.000 0.00 0.00 33.03 2.24
137 138 5.491982 AGGACACCAGAATCATCAACTTAC 58.508 41.667 0.00 0.00 0.00 2.34
138 139 5.249393 AGGACACCAGAATCATCAACTTACT 59.751 40.000 0.00 0.00 0.00 2.24
139 140 5.582665 GGACACCAGAATCATCAACTTACTC 59.417 44.000 0.00 0.00 0.00 2.59
140 141 6.365970 ACACCAGAATCATCAACTTACTCT 57.634 37.500 0.00 0.00 0.00 3.24
141 142 6.402222 ACACCAGAATCATCAACTTACTCTC 58.598 40.000 0.00 0.00 0.00 3.20
142 143 6.212388 ACACCAGAATCATCAACTTACTCTCT 59.788 38.462 0.00 0.00 0.00 3.10
143 144 6.756074 CACCAGAATCATCAACTTACTCTCTC 59.244 42.308 0.00 0.00 0.00 3.20
144 145 6.127196 ACCAGAATCATCAACTTACTCTCTCC 60.127 42.308 0.00 0.00 0.00 3.71
145 146 5.976534 CAGAATCATCAACTTACTCTCTCCG 59.023 44.000 0.00 0.00 0.00 4.63
146 147 5.654650 AGAATCATCAACTTACTCTCTCCGT 59.345 40.000 0.00 0.00 0.00 4.69
147 148 4.966965 TCATCAACTTACTCTCTCCGTC 57.033 45.455 0.00 0.00 0.00 4.79
148 149 3.695060 TCATCAACTTACTCTCTCCGTCC 59.305 47.826 0.00 0.00 0.00 4.79
149 150 2.082231 TCAACTTACTCTCTCCGTCCG 58.918 52.381 0.00 0.00 0.00 4.79
150 151 1.811359 CAACTTACTCTCTCCGTCCGT 59.189 52.381 0.00 0.00 0.00 4.69
151 152 1.451067 ACTTACTCTCTCCGTCCGTG 58.549 55.000 0.00 0.00 0.00 4.94
152 153 1.271271 ACTTACTCTCTCCGTCCGTGT 60.271 52.381 0.00 0.00 0.00 4.49
153 154 1.811359 CTTACTCTCTCCGTCCGTGTT 59.189 52.381 0.00 0.00 0.00 3.32
154 155 1.901591 TACTCTCTCCGTCCGTGTTT 58.098 50.000 0.00 0.00 0.00 2.83
155 156 1.901591 ACTCTCTCCGTCCGTGTTTA 58.098 50.000 0.00 0.00 0.00 2.01
156 157 2.444421 ACTCTCTCCGTCCGTGTTTAT 58.556 47.619 0.00 0.00 0.00 1.40
157 158 2.163815 ACTCTCTCCGTCCGTGTTTATG 59.836 50.000 0.00 0.00 0.00 1.90
158 159 2.422479 CTCTCTCCGTCCGTGTTTATGA 59.578 50.000 0.00 0.00 0.00 2.15
159 160 2.821378 TCTCTCCGTCCGTGTTTATGAA 59.179 45.455 0.00 0.00 0.00 2.57
160 161 3.119602 TCTCTCCGTCCGTGTTTATGAAG 60.120 47.826 0.00 0.00 0.00 3.02
161 162 1.659098 CTCCGTCCGTGTTTATGAAGC 59.341 52.381 0.00 0.00 0.00 3.86
162 163 0.725117 CCGTCCGTGTTTATGAAGCC 59.275 55.000 0.00 0.00 0.00 4.35
163 164 0.725117 CGTCCGTGTTTATGAAGCCC 59.275 55.000 0.00 0.00 0.00 5.19
164 165 1.092348 GTCCGTGTTTATGAAGCCCC 58.908 55.000 0.00 0.00 0.00 5.80
165 166 0.034863 TCCGTGTTTATGAAGCCCCC 60.035 55.000 0.00 0.00 0.00 5.40
166 167 0.034477 CCGTGTTTATGAAGCCCCCT 60.034 55.000 0.00 0.00 0.00 4.79
167 168 1.379527 CGTGTTTATGAAGCCCCCTC 58.620 55.000 0.00 0.00 0.00 4.30
168 169 1.339631 CGTGTTTATGAAGCCCCCTCA 60.340 52.381 0.00 0.00 0.00 3.86
169 170 2.092323 GTGTTTATGAAGCCCCCTCAC 58.908 52.381 0.00 0.00 0.00 3.51
170 171 1.707989 TGTTTATGAAGCCCCCTCACA 59.292 47.619 0.00 0.00 0.00 3.58
171 172 2.311542 TGTTTATGAAGCCCCCTCACAT 59.688 45.455 0.00 0.00 0.00 3.21
172 173 3.245586 TGTTTATGAAGCCCCCTCACATT 60.246 43.478 0.00 0.00 0.00 2.71
173 174 3.756082 TTATGAAGCCCCCTCACATTT 57.244 42.857 0.00 0.00 0.00 2.32
174 175 2.629017 ATGAAGCCCCCTCACATTTT 57.371 45.000 0.00 0.00 0.00 1.82
175 176 2.397044 TGAAGCCCCCTCACATTTTT 57.603 45.000 0.00 0.00 0.00 1.94
176 177 1.969923 TGAAGCCCCCTCACATTTTTG 59.030 47.619 0.00 0.00 0.00 2.44
177 178 2.247358 GAAGCCCCCTCACATTTTTGA 58.753 47.619 0.00 0.00 0.00 2.69
178 179 1.928868 AGCCCCCTCACATTTTTGAG 58.071 50.000 0.00 0.00 42.46 3.02
179 180 1.147817 AGCCCCCTCACATTTTTGAGT 59.852 47.619 0.00 0.00 41.40 3.41
180 181 1.970640 GCCCCCTCACATTTTTGAGTT 59.029 47.619 0.00 0.00 41.40 3.01
181 182 3.161866 GCCCCCTCACATTTTTGAGTTA 58.838 45.455 0.00 0.00 41.40 2.24
182 183 3.576550 GCCCCCTCACATTTTTGAGTTAA 59.423 43.478 0.00 0.00 41.40 2.01
183 184 4.039852 GCCCCCTCACATTTTTGAGTTAAA 59.960 41.667 0.00 0.00 41.40 1.52
184 185 5.783111 CCCCCTCACATTTTTGAGTTAAAG 58.217 41.667 0.00 0.00 41.40 1.85
185 186 5.304357 CCCCCTCACATTTTTGAGTTAAAGT 59.696 40.000 0.00 0.00 41.40 2.66
186 187 6.183360 CCCCCTCACATTTTTGAGTTAAAGTT 60.183 38.462 0.00 0.00 41.40 2.66
187 188 7.272244 CCCCTCACATTTTTGAGTTAAAGTTT 58.728 34.615 0.00 0.00 41.40 2.66
188 189 7.224557 CCCCTCACATTTTTGAGTTAAAGTTTG 59.775 37.037 0.00 0.00 41.40 2.93
189 190 7.978975 CCCTCACATTTTTGAGTTAAAGTTTGA 59.021 33.333 0.00 0.00 41.40 2.69
190 191 8.807581 CCTCACATTTTTGAGTTAAAGTTTGAC 58.192 33.333 2.38 2.38 41.40 3.18
191 192 8.696410 TCACATTTTTGAGTTAAAGTTTGACC 57.304 30.769 6.89 0.58 0.00 4.02
192 193 8.307483 TCACATTTTTGAGTTAAAGTTTGACCA 58.693 29.630 6.89 2.96 0.00 4.02
193 194 9.097257 CACATTTTTGAGTTAAAGTTTGACCAT 57.903 29.630 6.89 0.00 0.00 3.55
194 195 9.665719 ACATTTTTGAGTTAAAGTTTGACCATT 57.334 25.926 6.89 0.00 0.00 3.16
196 197 9.883142 ATTTTTGAGTTAAAGTTTGACCATTCA 57.117 25.926 6.89 2.55 0.00 2.57
197 198 9.883142 TTTTTGAGTTAAAGTTTGACCATTCAT 57.117 25.926 6.89 0.00 0.00 2.57
198 199 9.883142 TTTTGAGTTAAAGTTTGACCATTCATT 57.117 25.926 6.89 0.00 0.00 2.57
199 200 9.883142 TTTGAGTTAAAGTTTGACCATTCATTT 57.117 25.926 6.89 0.00 0.00 2.32
201 202 9.959749 TGAGTTAAAGTTTGACCATTCATTTAC 57.040 29.630 6.89 0.00 0.00 2.01
202 203 9.113876 GAGTTAAAGTTTGACCATTCATTTACG 57.886 33.333 6.89 0.00 0.00 3.18
203 204 8.626526 AGTTAAAGTTTGACCATTCATTTACGT 58.373 29.630 6.89 0.00 0.00 3.57
204 205 9.881529 GTTAAAGTTTGACCATTCATTTACGTA 57.118 29.630 0.00 0.00 0.00 3.57
236 237 9.574516 AAAATATGGGTCATATGTAGAAGAACC 57.425 33.333 1.90 0.80 37.17 3.62
237 238 4.665833 TGGGTCATATGTAGAAGAACCG 57.334 45.455 1.90 0.00 40.77 4.44
238 239 3.386726 TGGGTCATATGTAGAAGAACCGG 59.613 47.826 0.00 0.00 40.77 5.28
239 240 3.387050 GGGTCATATGTAGAAGAACCGGT 59.613 47.826 0.00 0.00 0.00 5.28
240 241 4.586001 GGGTCATATGTAGAAGAACCGGTA 59.414 45.833 8.00 0.00 0.00 4.02
241 242 5.245526 GGGTCATATGTAGAAGAACCGGTAT 59.754 44.000 8.00 0.00 0.00 2.73
242 243 6.388278 GGTCATATGTAGAAGAACCGGTATC 58.612 44.000 8.00 7.24 0.00 2.24
243 244 6.015688 GGTCATATGTAGAAGAACCGGTATCA 60.016 42.308 8.00 0.00 0.00 2.15
244 245 7.309867 GGTCATATGTAGAAGAACCGGTATCAT 60.310 40.741 8.00 7.76 0.00 2.45
245 246 8.088981 GTCATATGTAGAAGAACCGGTATCATT 58.911 37.037 8.00 0.00 0.00 2.57
246 247 8.088365 TCATATGTAGAAGAACCGGTATCATTG 58.912 37.037 8.00 6.86 0.00 2.82
247 248 5.018539 TGTAGAAGAACCGGTATCATTGG 57.981 43.478 8.00 0.00 0.00 3.16
248 249 4.712829 TGTAGAAGAACCGGTATCATTGGA 59.287 41.667 8.00 0.00 0.00 3.53
249 250 4.837093 AGAAGAACCGGTATCATTGGAA 57.163 40.909 8.00 0.00 0.00 3.53
250 251 5.174037 AGAAGAACCGGTATCATTGGAAA 57.826 39.130 8.00 0.00 0.00 3.13
251 252 4.941873 AGAAGAACCGGTATCATTGGAAAC 59.058 41.667 8.00 0.00 0.00 2.78
252 253 4.569719 AGAACCGGTATCATTGGAAACT 57.430 40.909 8.00 0.00 0.00 2.66
253 254 4.918588 AGAACCGGTATCATTGGAAACTT 58.081 39.130 8.00 0.00 0.00 2.66
254 255 4.941873 AGAACCGGTATCATTGGAAACTTC 59.058 41.667 8.00 0.00 0.00 3.01
255 256 4.295141 ACCGGTATCATTGGAAACTTCA 57.705 40.909 4.49 0.00 0.00 3.02
256 257 4.855340 ACCGGTATCATTGGAAACTTCAT 58.145 39.130 4.49 0.00 0.00 2.57
257 258 5.261216 ACCGGTATCATTGGAAACTTCATT 58.739 37.500 4.49 0.00 0.00 2.57
258 259 5.357032 ACCGGTATCATTGGAAACTTCATTC 59.643 40.000 4.49 0.00 0.00 2.67
259 260 5.501715 CGGTATCATTGGAAACTTCATTCG 58.498 41.667 0.00 0.00 0.00 3.34
260 261 5.293324 CGGTATCATTGGAAACTTCATTCGA 59.707 40.000 0.00 0.00 0.00 3.71
261 262 6.183360 CGGTATCATTGGAAACTTCATTCGAA 60.183 38.462 0.00 0.00 32.69 3.71
262 263 7.467267 CGGTATCATTGGAAACTTCATTCGAAT 60.467 37.037 4.39 4.39 37.97 3.34
263 264 8.836413 GGTATCATTGGAAACTTCATTCGAATA 58.164 33.333 10.97 0.00 36.13 1.75
264 265 9.651718 GTATCATTGGAAACTTCATTCGAATAC 57.348 33.333 10.97 0.00 36.13 1.89
265 266 7.680442 TCATTGGAAACTTCATTCGAATACA 57.320 32.000 10.97 0.00 36.13 2.29
266 267 8.105097 TCATTGGAAACTTCATTCGAATACAA 57.895 30.769 10.97 5.97 36.13 2.41
267 268 8.572185 TCATTGGAAACTTCATTCGAATACAAA 58.428 29.630 10.97 5.11 36.13 2.83
268 269 8.638565 CATTGGAAACTTCATTCGAATACAAAC 58.361 33.333 10.97 0.05 36.13 2.93
269 270 6.674066 TGGAAACTTCATTCGAATACAAACC 58.326 36.000 10.97 9.15 0.00 3.27
270 271 6.090783 GGAAACTTCATTCGAATACAAACCC 58.909 40.000 10.97 3.85 0.00 4.11
271 272 6.294286 GGAAACTTCATTCGAATACAAACCCA 60.294 38.462 10.97 0.00 0.00 4.51
272 273 5.622770 ACTTCATTCGAATACAAACCCAC 57.377 39.130 10.97 0.00 0.00 4.61
273 274 5.067273 ACTTCATTCGAATACAAACCCACA 58.933 37.500 10.97 0.00 0.00 4.17
274 275 5.533154 ACTTCATTCGAATACAAACCCACAA 59.467 36.000 10.97 0.00 0.00 3.33
275 276 6.039941 ACTTCATTCGAATACAAACCCACAAA 59.960 34.615 10.97 0.00 0.00 2.83
276 277 5.764131 TCATTCGAATACAAACCCACAAAC 58.236 37.500 10.97 0.00 0.00 2.93
277 278 4.571372 TTCGAATACAAACCCACAAACC 57.429 40.909 0.00 0.00 0.00 3.27
278 279 2.885894 TCGAATACAAACCCACAAACCC 59.114 45.455 0.00 0.00 0.00 4.11
279 280 2.623889 CGAATACAAACCCACAAACCCA 59.376 45.455 0.00 0.00 0.00 4.51
280 281 3.068307 CGAATACAAACCCACAAACCCAA 59.932 43.478 0.00 0.00 0.00 4.12
281 282 4.262249 CGAATACAAACCCACAAACCCAAT 60.262 41.667 0.00 0.00 0.00 3.16
282 283 5.047943 CGAATACAAACCCACAAACCCAATA 60.048 40.000 0.00 0.00 0.00 1.90
283 284 6.516860 CGAATACAAACCCACAAACCCAATAA 60.517 38.462 0.00 0.00 0.00 1.40
284 285 6.943899 ATACAAACCCACAAACCCAATAAT 57.056 33.333 0.00 0.00 0.00 1.28
285 286 8.437274 AATACAAACCCACAAACCCAATAATA 57.563 30.769 0.00 0.00 0.00 0.98
286 287 6.943899 ACAAACCCACAAACCCAATAATAT 57.056 33.333 0.00 0.00 0.00 1.28
287 288 9.716556 ATACAAACCCACAAACCCAATAATATA 57.283 29.630 0.00 0.00 0.00 0.86
288 289 8.616799 ACAAACCCACAAACCCAATAATATAT 57.383 30.769 0.00 0.00 0.00 0.86
289 290 9.052365 ACAAACCCACAAACCCAATAATATATT 57.948 29.630 2.97 2.97 0.00 1.28
290 291 9.898152 CAAACCCACAAACCCAATAATATATTT 57.102 29.630 2.68 0.00 0.00 1.40
292 293 9.898152 AACCCACAAACCCAATAATATATTTTG 57.102 29.630 2.68 8.01 0.00 2.44
293 294 9.052365 ACCCACAAACCCAATAATATATTTTGT 57.948 29.630 2.68 3.72 36.41 2.83
314 315 9.979578 TTTTGTATGACAGATTGCTTGTATTTT 57.020 25.926 0.00 0.00 0.00 1.82
315 316 8.969121 TTGTATGACAGATTGCTTGTATTTTG 57.031 30.769 0.00 0.00 0.00 2.44
316 317 7.028962 TGTATGACAGATTGCTTGTATTTTGC 58.971 34.615 0.00 0.00 0.00 3.68
317 318 5.450592 TGACAGATTGCTTGTATTTTGCA 57.549 34.783 0.00 0.00 34.69 4.08
330 331 9.459276 GCTTGTATTTTGCAAAATAAATGTACG 57.541 29.630 34.76 22.36 41.14 3.67
331 332 9.950858 CTTGTATTTTGCAAAATAAATGTACGG 57.049 29.630 34.76 20.71 41.14 4.02
332 333 9.477484 TTGTATTTTGCAAAATAAATGTACGGT 57.523 25.926 34.76 16.05 41.14 4.83
333 334 9.477484 TGTATTTTGCAAAATAAATGTACGGTT 57.523 25.926 34.76 15.88 41.14 4.44
334 335 9.946418 GTATTTTGCAAAATAAATGTACGGTTC 57.054 29.630 34.76 19.70 41.14 3.62
335 336 8.594881 ATTTTGCAAAATAAATGTACGGTTCA 57.405 26.923 31.00 3.31 36.88 3.18
336 337 8.420374 TTTTGCAAAATAAATGTACGGTTCAA 57.580 26.923 20.46 0.00 0.00 2.69
337 338 8.420374 TTTGCAAAATAAATGTACGGTTCAAA 57.580 26.923 10.02 0.00 0.00 2.69
338 339 7.630470 TGCAAAATAAATGTACGGTTCAAAG 57.370 32.000 0.00 0.00 0.00 2.77
339 340 7.203910 TGCAAAATAAATGTACGGTTCAAAGT 58.796 30.769 0.00 0.00 0.00 2.66
340 341 7.707035 TGCAAAATAAATGTACGGTTCAAAGTT 59.293 29.630 0.00 0.00 0.00 2.66
341 342 8.544597 GCAAAATAAATGTACGGTTCAAAGTTT 58.455 29.630 0.00 0.00 0.00 2.66
345 346 9.681692 AATAAATGTACGGTTCAAAGTTTAACC 57.318 29.630 13.02 13.02 41.48 2.85
346 347 6.947644 AATGTACGGTTCAAAGTTTAACCT 57.052 33.333 17.45 11.10 42.51 3.50
347 348 8.449251 AAATGTACGGTTCAAAGTTTAACCTA 57.551 30.769 17.45 10.50 42.51 3.08
348 349 8.449251 AATGTACGGTTCAAAGTTTAACCTAA 57.551 30.769 17.45 8.43 42.51 2.69
349 350 7.856145 TGTACGGTTCAAAGTTTAACCTAAA 57.144 32.000 17.45 7.83 42.51 1.85
350 351 8.273780 TGTACGGTTCAAAGTTTAACCTAAAA 57.726 30.769 17.45 5.55 42.51 1.52
351 352 8.901793 TGTACGGTTCAAAGTTTAACCTAAAAT 58.098 29.630 17.45 7.16 42.51 1.82
354 355 8.901793 ACGGTTCAAAGTTTAACCTAAAATACA 58.098 29.630 17.45 0.00 42.51 2.29
355 356 9.733219 CGGTTCAAAGTTTAACCTAAAATACAA 57.267 29.630 17.45 0.00 42.51 2.41
360 361 9.389570 CAAAGTTTAACCTAAAATACAAGGACG 57.610 33.333 0.00 0.00 36.66 4.79
361 362 7.677454 AGTTTAACCTAAAATACAAGGACGG 57.323 36.000 0.00 0.00 36.66 4.79
362 363 7.452562 AGTTTAACCTAAAATACAAGGACGGA 58.547 34.615 0.00 0.00 36.66 4.69
363 364 7.605309 AGTTTAACCTAAAATACAAGGACGGAG 59.395 37.037 0.00 0.00 36.66 4.63
364 365 4.482952 ACCTAAAATACAAGGACGGAGG 57.517 45.455 0.00 0.00 36.66 4.30
365 366 3.842436 ACCTAAAATACAAGGACGGAGGT 59.158 43.478 0.00 0.00 36.66 3.85
366 367 5.025453 ACCTAAAATACAAGGACGGAGGTA 58.975 41.667 0.00 0.00 36.66 3.08
367 368 5.128335 ACCTAAAATACAAGGACGGAGGTAG 59.872 44.000 0.00 0.00 36.66 3.18
368 369 5.128335 CCTAAAATACAAGGACGGAGGTAGT 59.872 44.000 0.00 0.00 34.58 2.73
369 370 6.322201 CCTAAAATACAAGGACGGAGGTAGTA 59.678 42.308 0.00 0.00 34.58 1.82
370 371 5.588958 AAATACAAGGACGGAGGTAGTAC 57.411 43.478 0.00 0.00 0.00 2.73
371 372 1.844687 ACAAGGACGGAGGTAGTACC 58.155 55.000 11.73 11.73 38.99 3.34
378 379 4.351502 GAGGTAGTACCGCCCTGT 57.648 61.111 13.76 0.00 44.90 4.00
379 380 1.814527 GAGGTAGTACCGCCCTGTG 59.185 63.158 13.76 0.00 44.90 3.66
380 381 2.186125 GGTAGTACCGCCCTGTGC 59.814 66.667 2.90 0.00 0.00 4.57
381 382 2.652095 GGTAGTACCGCCCTGTGCA 61.652 63.158 2.90 0.00 41.33 4.57
382 383 1.520666 GTAGTACCGCCCTGTGCAT 59.479 57.895 0.00 0.00 41.33 3.96
383 384 0.529992 GTAGTACCGCCCTGTGCATC 60.530 60.000 0.00 0.00 41.33 3.91
384 385 0.973496 TAGTACCGCCCTGTGCATCA 60.973 55.000 0.00 0.00 41.33 3.07
385 386 2.106683 GTACCGCCCTGTGCATCAC 61.107 63.158 0.00 0.00 41.33 3.06
386 387 2.290287 TACCGCCCTGTGCATCACT 61.290 57.895 0.00 0.00 41.33 3.41
387 388 2.520465 TACCGCCCTGTGCATCACTG 62.520 60.000 0.00 0.00 41.33 3.66
398 399 2.857592 GCATCACTGCCTTATGGTTG 57.142 50.000 0.00 0.00 42.88 3.77
399 400 2.094675 GCATCACTGCCTTATGGTTGT 58.905 47.619 0.00 0.00 42.88 3.32
400 401 2.159338 GCATCACTGCCTTATGGTTGTG 60.159 50.000 12.58 12.58 42.88 3.33
401 402 2.198827 TCACTGCCTTATGGTTGTGG 57.801 50.000 16.19 0.00 38.35 4.17
402 403 1.176527 CACTGCCTTATGGTTGTGGG 58.823 55.000 11.56 0.00 36.13 4.61
403 404 0.611896 ACTGCCTTATGGTTGTGGGC 60.612 55.000 0.00 0.00 42.73 5.36
404 405 1.304879 TGCCTTATGGTTGTGGGCC 60.305 57.895 0.00 0.00 41.84 5.80
405 406 1.304879 GCCTTATGGTTGTGGGCCA 60.305 57.895 0.00 0.00 40.68 5.36
407 408 1.410932 GCCTTATGGTTGTGGGCCATA 60.411 52.381 10.70 3.21 44.23 2.74
408 409 2.306847 CCTTATGGTTGTGGGCCATAC 58.693 52.381 10.70 11.50 45.51 2.39
409 410 2.091885 CCTTATGGTTGTGGGCCATACT 60.092 50.000 10.70 0.00 45.51 2.12
410 411 3.214328 CTTATGGTTGTGGGCCATACTC 58.786 50.000 10.70 2.54 45.51 2.59
411 412 0.258774 ATGGTTGTGGGCCATACTCC 59.741 55.000 10.70 12.90 44.23 3.85
412 413 1.076995 GGTTGTGGGCCATACTCCC 60.077 63.158 10.70 3.03 44.17 4.30
413 414 1.571773 GGTTGTGGGCCATACTCCCT 61.572 60.000 10.70 0.00 44.23 4.20
414 415 1.209621 GTTGTGGGCCATACTCCCTA 58.790 55.000 10.70 0.00 44.23 3.53
415 416 1.141053 GTTGTGGGCCATACTCCCTAG 59.859 57.143 10.70 0.00 44.23 3.02
416 417 0.639943 TGTGGGCCATACTCCCTAGA 59.360 55.000 10.70 0.00 44.23 2.43
417 418 1.009060 TGTGGGCCATACTCCCTAGAA 59.991 52.381 10.70 0.00 44.23 2.10
418 419 1.416772 GTGGGCCATACTCCCTAGAAC 59.583 57.143 10.70 0.00 44.23 3.01
419 420 1.057471 GGGCCATACTCCCTAGAACC 58.943 60.000 4.39 0.00 40.66 3.62
420 421 1.057471 GGCCATACTCCCTAGAACCC 58.943 60.000 0.00 0.00 0.00 4.11
421 422 1.057471 GCCATACTCCCTAGAACCCC 58.943 60.000 0.00 0.00 0.00 4.95
422 423 1.414685 GCCATACTCCCTAGAACCCCT 60.415 57.143 0.00 0.00 0.00 4.79
423 424 2.610873 CCATACTCCCTAGAACCCCTC 58.389 57.143 0.00 0.00 0.00 4.30
424 425 2.610873 CATACTCCCTAGAACCCCTCC 58.389 57.143 0.00 0.00 0.00 4.30
425 426 2.012168 TACTCCCTAGAACCCCTCCT 57.988 55.000 0.00 0.00 0.00 3.69
426 427 1.102938 ACTCCCTAGAACCCCTCCTT 58.897 55.000 0.00 0.00 0.00 3.36
427 428 1.273896 ACTCCCTAGAACCCCTCCTTG 60.274 57.143 0.00 0.00 0.00 3.61
428 429 0.620700 TCCCTAGAACCCCTCCTTGC 60.621 60.000 0.00 0.00 0.00 4.01
429 430 1.522569 CCTAGAACCCCTCCTTGCG 59.477 63.158 0.00 0.00 0.00 4.85
430 431 1.522569 CTAGAACCCCTCCTTGCGG 59.477 63.158 0.00 0.00 0.00 5.69
431 432 2.595009 CTAGAACCCCTCCTTGCGGC 62.595 65.000 0.00 0.00 0.00 6.53
451 452 4.096003 GCCCTTCGCTACCCTGCA 62.096 66.667 0.00 0.00 0.00 4.41
452 453 2.125106 CCCTTCGCTACCCTGCAC 60.125 66.667 0.00 0.00 0.00 4.57
453 454 2.125106 CCTTCGCTACCCTGCACC 60.125 66.667 0.00 0.00 0.00 5.01
454 455 2.662596 CTTCGCTACCCTGCACCA 59.337 61.111 0.00 0.00 0.00 4.17
455 456 1.448540 CTTCGCTACCCTGCACCAG 60.449 63.158 0.00 0.00 0.00 4.00
464 465 2.034687 CTGCACCAGGTGAAGGGG 59.965 66.667 24.96 0.00 35.66 4.79
465 466 2.776526 TGCACCAGGTGAAGGGGT 60.777 61.111 24.96 0.00 35.23 4.95
466 467 2.357593 CTGCACCAGGTGAAGGGGTT 62.358 60.000 24.96 0.00 35.66 4.11
467 468 1.063070 TGCACCAGGTGAAGGGGTTA 61.063 55.000 24.96 0.00 35.23 2.85
468 469 0.111639 GCACCAGGTGAAGGGGTTAA 59.888 55.000 24.96 0.00 35.23 2.01
469 470 1.479757 GCACCAGGTGAAGGGGTTAAA 60.480 52.381 24.96 0.00 35.23 1.52
470 471 2.821625 GCACCAGGTGAAGGGGTTAAAT 60.822 50.000 24.96 0.00 35.23 1.40
471 472 3.506398 CACCAGGTGAAGGGGTTAAATT 58.494 45.455 15.35 0.00 35.23 1.82
472 473 3.901222 CACCAGGTGAAGGGGTTAAATTT 59.099 43.478 15.35 0.00 35.23 1.82
473 474 4.346709 CACCAGGTGAAGGGGTTAAATTTT 59.653 41.667 15.35 0.00 35.23 1.82
474 475 4.972568 ACCAGGTGAAGGGGTTAAATTTTT 59.027 37.500 0.00 0.00 0.00 1.94
475 476 5.163248 ACCAGGTGAAGGGGTTAAATTTTTG 60.163 40.000 0.00 0.00 0.00 2.44
476 477 5.304778 CAGGTGAAGGGGTTAAATTTTTGG 58.695 41.667 0.00 0.00 0.00 3.28
477 478 5.071115 CAGGTGAAGGGGTTAAATTTTTGGA 59.929 40.000 0.00 0.00 0.00 3.53
478 479 5.306937 AGGTGAAGGGGTTAAATTTTTGGAG 59.693 40.000 0.00 0.00 0.00 3.86
479 480 5.305902 GGTGAAGGGGTTAAATTTTTGGAGA 59.694 40.000 0.00 0.00 0.00 3.71
480 481 6.455647 GTGAAGGGGTTAAATTTTTGGAGAG 58.544 40.000 0.00 0.00 0.00 3.20
481 482 5.011635 TGAAGGGGTTAAATTTTTGGAGAGC 59.988 40.000 0.00 0.00 0.00 4.09
482 483 3.509967 AGGGGTTAAATTTTTGGAGAGCG 59.490 43.478 0.00 0.00 0.00 5.03
483 484 3.250744 GGGTTAAATTTTTGGAGAGCGC 58.749 45.455 0.00 0.00 0.00 5.92
484 485 3.250744 GGTTAAATTTTTGGAGAGCGCC 58.749 45.455 2.29 0.00 0.00 6.53
485 486 3.056821 GGTTAAATTTTTGGAGAGCGCCT 60.057 43.478 2.29 0.00 0.00 5.52
486 487 4.166523 GTTAAATTTTTGGAGAGCGCCTC 58.833 43.478 15.12 15.12 41.22 4.70
487 488 0.804989 AATTTTTGGAGAGCGCCTCG 59.195 50.000 16.39 0.00 42.89 4.63
488 489 0.036388 ATTTTTGGAGAGCGCCTCGA 60.036 50.000 16.39 11.72 42.89 4.04
489 490 0.670546 TTTTTGGAGAGCGCCTCGAG 60.671 55.000 16.39 5.13 42.89 4.04
490 491 2.507110 TTTTGGAGAGCGCCTCGAGG 62.507 60.000 27.83 27.83 42.89 4.63
500 501 4.544689 CCTCGAGGCGACTGCTCG 62.545 72.222 20.67 0.00 44.43 5.03
501 502 4.544689 CTCGAGGCGACTGCTCGG 62.545 72.222 0.00 0.00 44.43 4.63
508 509 2.430921 CGACTGCTCGGCTTCGTT 60.431 61.111 10.19 0.00 36.16 3.85
509 510 2.437343 CGACTGCTCGGCTTCGTTC 61.437 63.158 10.19 0.00 36.16 3.95
510 511 2.048127 ACTGCTCGGCTTCGTTCC 60.048 61.111 0.00 0.00 35.06 3.62
511 512 2.048222 CTGCTCGGCTTCGTTCCA 60.048 61.111 0.00 0.00 35.06 3.53
512 513 2.357034 TGCTCGGCTTCGTTCCAC 60.357 61.111 0.00 0.00 35.06 4.02
513 514 3.479269 GCTCGGCTTCGTTCCACG 61.479 66.667 0.00 0.00 44.19 4.94
526 527 4.985044 CGTTCCACGAATTCAACTACTT 57.015 40.909 6.22 0.00 46.05 2.24
527 528 4.942765 CGTTCCACGAATTCAACTACTTC 58.057 43.478 6.22 0.00 46.05 3.01
528 529 4.143179 CGTTCCACGAATTCAACTACTTCC 60.143 45.833 6.22 0.00 46.05 3.46
529 530 4.610605 TCCACGAATTCAACTACTTCCA 57.389 40.909 6.22 0.00 0.00 3.53
530 531 5.160607 TCCACGAATTCAACTACTTCCAT 57.839 39.130 6.22 0.00 0.00 3.41
531 532 4.935205 TCCACGAATTCAACTACTTCCATG 59.065 41.667 6.22 0.00 0.00 3.66
532 533 4.935205 CCACGAATTCAACTACTTCCATGA 59.065 41.667 6.22 0.00 0.00 3.07
533 534 5.163854 CCACGAATTCAACTACTTCCATGAC 60.164 44.000 6.22 0.00 0.00 3.06
534 535 5.639506 CACGAATTCAACTACTTCCATGACT 59.360 40.000 6.22 0.00 0.00 3.41
535 536 6.147821 CACGAATTCAACTACTTCCATGACTT 59.852 38.462 6.22 0.00 0.00 3.01
536 537 6.369065 ACGAATTCAACTACTTCCATGACTTC 59.631 38.462 6.22 0.00 31.77 3.01
537 538 6.454318 CGAATTCAACTACTTCCATGACTTCG 60.454 42.308 6.22 10.98 43.44 3.79
538 539 5.462530 TTCAACTACTTCCATGACTTCGA 57.537 39.130 0.00 0.00 0.00 3.71
539 540 4.806330 TCAACTACTTCCATGACTTCGAC 58.194 43.478 0.00 0.00 0.00 4.20
540 541 4.523173 TCAACTACTTCCATGACTTCGACT 59.477 41.667 0.00 0.00 0.00 4.18
541 542 4.705337 ACTACTTCCATGACTTCGACTC 57.295 45.455 0.00 0.00 0.00 3.36
542 543 3.444388 ACTACTTCCATGACTTCGACTCC 59.556 47.826 0.00 0.00 0.00 3.85
543 544 2.530701 ACTTCCATGACTTCGACTCCT 58.469 47.619 0.00 0.00 0.00 3.69
544 545 3.698289 ACTTCCATGACTTCGACTCCTA 58.302 45.455 0.00 0.00 0.00 2.94
545 546 4.282496 ACTTCCATGACTTCGACTCCTAT 58.718 43.478 0.00 0.00 0.00 2.57
546 547 4.712337 ACTTCCATGACTTCGACTCCTATT 59.288 41.667 0.00 0.00 0.00 1.73
547 548 5.187967 ACTTCCATGACTTCGACTCCTATTT 59.812 40.000 0.00 0.00 0.00 1.40
548 549 5.263968 TCCATGACTTCGACTCCTATTTC 57.736 43.478 0.00 0.00 0.00 2.17
549 550 4.045104 CCATGACTTCGACTCCTATTTCG 58.955 47.826 0.00 0.00 36.55 3.46
550 551 3.146618 TGACTTCGACTCCTATTTCGC 57.853 47.619 0.00 0.00 35.15 4.70
551 552 2.753452 TGACTTCGACTCCTATTTCGCT 59.247 45.455 0.00 0.00 35.15 4.93
552 553 3.109619 GACTTCGACTCCTATTTCGCTG 58.890 50.000 0.00 0.00 35.15 5.18
553 554 2.753452 ACTTCGACTCCTATTTCGCTGA 59.247 45.455 0.00 0.00 35.15 4.26
554 555 2.846039 TCGACTCCTATTTCGCTGAC 57.154 50.000 0.00 0.00 35.15 3.51
555 556 1.404391 TCGACTCCTATTTCGCTGACC 59.596 52.381 0.00 0.00 35.15 4.02
556 557 1.405821 CGACTCCTATTTCGCTGACCT 59.594 52.381 0.00 0.00 0.00 3.85
557 558 2.541999 CGACTCCTATTTCGCTGACCTC 60.542 54.545 0.00 0.00 0.00 3.85
558 559 2.427453 GACTCCTATTTCGCTGACCTCA 59.573 50.000 0.00 0.00 0.00 3.86
559 560 2.166664 ACTCCTATTTCGCTGACCTCAC 59.833 50.000 0.00 0.00 0.00 3.51
560 561 1.480954 TCCTATTTCGCTGACCTCACC 59.519 52.381 0.00 0.00 0.00 4.02
561 562 1.207089 CCTATTTCGCTGACCTCACCA 59.793 52.381 0.00 0.00 0.00 4.17
562 563 2.158900 CCTATTTCGCTGACCTCACCAT 60.159 50.000 0.00 0.00 0.00 3.55
563 564 1.742761 ATTTCGCTGACCTCACCATG 58.257 50.000 0.00 0.00 0.00 3.66
564 565 0.321564 TTTCGCTGACCTCACCATGG 60.322 55.000 11.19 11.19 0.00 3.66
565 566 2.803155 TTCGCTGACCTCACCATGGC 62.803 60.000 13.04 0.00 0.00 4.40
566 567 2.673523 GCTGACCTCACCATGGCT 59.326 61.111 13.04 0.00 0.00 4.75
567 568 1.001641 GCTGACCTCACCATGGCTT 60.002 57.895 13.04 0.00 0.00 4.35
568 569 0.253044 GCTGACCTCACCATGGCTTA 59.747 55.000 13.04 0.00 0.00 3.09
569 570 2.014068 GCTGACCTCACCATGGCTTAC 61.014 57.143 13.04 0.00 0.00 2.34
570 571 1.556911 CTGACCTCACCATGGCTTACT 59.443 52.381 13.04 0.00 0.00 2.24
571 572 2.766263 CTGACCTCACCATGGCTTACTA 59.234 50.000 13.04 0.00 0.00 1.82
572 573 3.384168 TGACCTCACCATGGCTTACTAT 58.616 45.455 13.04 0.00 0.00 2.12
573 574 3.134623 TGACCTCACCATGGCTTACTATG 59.865 47.826 13.04 0.00 0.00 2.23
574 575 2.158755 ACCTCACCATGGCTTACTATGC 60.159 50.000 13.04 0.00 0.00 3.14
575 576 2.105477 CCTCACCATGGCTTACTATGCT 59.895 50.000 13.04 0.00 0.00 3.79
576 577 3.136763 CTCACCATGGCTTACTATGCTG 58.863 50.000 13.04 0.00 0.00 4.41
577 578 2.158769 TCACCATGGCTTACTATGCTGG 60.159 50.000 13.04 0.00 33.61 4.85
578 579 1.846439 ACCATGGCTTACTATGCTGGT 59.154 47.619 13.04 3.30 35.19 4.00
579 580 2.224606 CCATGGCTTACTATGCTGGTG 58.775 52.381 0.00 0.00 0.00 4.17
580 581 1.605710 CATGGCTTACTATGCTGGTGC 59.394 52.381 0.00 0.00 40.20 5.01
581 582 0.107214 TGGCTTACTATGCTGGTGCC 60.107 55.000 0.00 0.00 38.71 5.01
582 583 0.107214 GGCTTACTATGCTGGTGCCA 60.107 55.000 0.00 0.00 38.79 4.92
583 584 1.017387 GCTTACTATGCTGGTGCCAC 58.983 55.000 0.00 0.00 38.71 5.01
584 585 1.290203 CTTACTATGCTGGTGCCACG 58.710 55.000 0.00 0.00 38.71 4.94
585 586 0.899019 TTACTATGCTGGTGCCACGA 59.101 50.000 0.00 0.00 38.71 4.35
586 587 0.899019 TACTATGCTGGTGCCACGAA 59.101 50.000 0.00 0.00 38.71 3.85
587 588 0.391661 ACTATGCTGGTGCCACGAAG 60.392 55.000 0.00 0.00 38.71 3.79
588 589 0.108186 CTATGCTGGTGCCACGAAGA 60.108 55.000 0.00 0.00 38.71 2.87
589 590 0.323302 TATGCTGGTGCCACGAAGAA 59.677 50.000 0.00 0.00 38.71 2.52
590 591 1.237285 ATGCTGGTGCCACGAAGAAC 61.237 55.000 0.00 0.00 38.71 3.01
591 592 2.617274 GCTGGTGCCACGAAGAACC 61.617 63.158 0.00 0.00 0.00 3.62
592 593 1.966451 CTGGTGCCACGAAGAACCC 60.966 63.158 4.45 0.00 31.30 4.11
593 594 2.397413 CTGGTGCCACGAAGAACCCT 62.397 60.000 4.45 0.00 31.30 4.34
594 595 1.228154 GGTGCCACGAAGAACCCTT 60.228 57.895 0.00 0.00 34.81 3.95
595 596 0.822121 GGTGCCACGAAGAACCCTTT 60.822 55.000 0.00 0.00 31.62 3.11
596 597 1.029681 GTGCCACGAAGAACCCTTTT 58.970 50.000 0.00 0.00 31.62 2.27
597 598 1.407618 GTGCCACGAAGAACCCTTTTT 59.592 47.619 0.00 0.00 31.62 1.94
616 617 2.577606 TTTTCTCAAATGGGAGGCGA 57.422 45.000 0.00 0.00 35.58 5.54
617 618 2.113860 TTTCTCAAATGGGAGGCGAG 57.886 50.000 0.00 0.00 35.58 5.03
618 619 1.275666 TTCTCAAATGGGAGGCGAGA 58.724 50.000 0.00 0.00 35.58 4.04
619 620 1.500474 TCTCAAATGGGAGGCGAGAT 58.500 50.000 0.00 0.00 35.58 2.75
620 621 1.839994 TCTCAAATGGGAGGCGAGATT 59.160 47.619 0.00 0.00 35.58 2.40
621 622 2.239654 TCTCAAATGGGAGGCGAGATTT 59.760 45.455 0.00 0.00 35.58 2.17
622 623 2.615912 CTCAAATGGGAGGCGAGATTTC 59.384 50.000 0.00 0.00 0.00 2.17
623 624 2.239654 TCAAATGGGAGGCGAGATTTCT 59.760 45.455 0.00 0.00 0.00 2.52
624 625 3.019564 CAAATGGGAGGCGAGATTTCTT 58.980 45.455 0.00 0.00 0.00 2.52
625 626 3.372440 AATGGGAGGCGAGATTTCTTT 57.628 42.857 0.00 0.00 0.00 2.52
626 627 2.403252 TGGGAGGCGAGATTTCTTTC 57.597 50.000 0.00 0.00 0.00 2.62
627 628 1.065418 TGGGAGGCGAGATTTCTTTCC 60.065 52.381 0.00 0.00 0.00 3.13
628 629 1.669604 GGAGGCGAGATTTCTTTCCC 58.330 55.000 0.00 0.00 0.00 3.97
629 630 1.210722 GGAGGCGAGATTTCTTTCCCT 59.789 52.381 0.00 0.00 0.00 4.20
630 631 2.434702 GGAGGCGAGATTTCTTTCCCTA 59.565 50.000 0.00 0.00 0.00 3.53
631 632 3.071747 GGAGGCGAGATTTCTTTCCCTAT 59.928 47.826 0.00 0.00 0.00 2.57
632 633 4.445019 GGAGGCGAGATTTCTTTCCCTATT 60.445 45.833 0.00 0.00 0.00 1.73
633 634 5.117406 AGGCGAGATTTCTTTCCCTATTT 57.883 39.130 0.00 0.00 0.00 1.40
634 635 6.248569 AGGCGAGATTTCTTTCCCTATTTA 57.751 37.500 0.00 0.00 0.00 1.40
635 636 6.842676 AGGCGAGATTTCTTTCCCTATTTAT 58.157 36.000 0.00 0.00 0.00 1.40
636 637 6.712547 AGGCGAGATTTCTTTCCCTATTTATG 59.287 38.462 0.00 0.00 0.00 1.90
637 638 6.374578 GCGAGATTTCTTTCCCTATTTATGC 58.625 40.000 0.00 0.00 0.00 3.14
638 639 6.568653 GCGAGATTTCTTTCCCTATTTATGCC 60.569 42.308 0.00 0.00 0.00 4.40
639 640 6.486657 CGAGATTTCTTTCCCTATTTATGCCA 59.513 38.462 0.00 0.00 0.00 4.92
640 641 7.520614 CGAGATTTCTTTCCCTATTTATGCCAC 60.521 40.741 0.00 0.00 0.00 5.01
641 642 5.828299 TTTCTTTCCCTATTTATGCCACG 57.172 39.130 0.00 0.00 0.00 4.94
642 643 4.764050 TCTTTCCCTATTTATGCCACGA 57.236 40.909 0.00 0.00 0.00 4.35
643 644 5.105567 TCTTTCCCTATTTATGCCACGAA 57.894 39.130 0.00 0.00 0.00 3.85
644 645 5.690865 TCTTTCCCTATTTATGCCACGAAT 58.309 37.500 0.00 0.00 0.00 3.34
645 646 6.833041 TCTTTCCCTATTTATGCCACGAATA 58.167 36.000 0.00 0.00 0.00 1.75
646 647 6.934645 TCTTTCCCTATTTATGCCACGAATAG 59.065 38.462 0.00 3.19 34.61 1.73
647 648 4.575885 TCCCTATTTATGCCACGAATAGC 58.424 43.478 0.00 0.00 33.88 2.97
648 649 4.041075 TCCCTATTTATGCCACGAATAGCA 59.959 41.667 0.00 0.00 44.45 3.49
649 650 4.154195 CCCTATTTATGCCACGAATAGCAC 59.846 45.833 0.00 0.00 42.84 4.40
650 651 3.878086 ATTTATGCCACGAATAGCACG 57.122 42.857 0.00 0.00 42.84 5.34
651 652 2.588027 TTATGCCACGAATAGCACGA 57.412 45.000 0.00 0.00 42.84 4.35
652 653 1.847818 TATGCCACGAATAGCACGAC 58.152 50.000 0.00 0.00 42.84 4.34
653 654 0.810031 ATGCCACGAATAGCACGACC 60.810 55.000 0.00 0.00 42.84 4.79
654 655 2.171725 GCCACGAATAGCACGACCC 61.172 63.158 0.00 0.00 34.70 4.46
655 656 1.520787 CCACGAATAGCACGACCCC 60.521 63.158 0.00 0.00 34.70 4.95
656 657 1.515954 CACGAATAGCACGACCCCT 59.484 57.895 0.00 0.00 34.70 4.79
657 658 0.806102 CACGAATAGCACGACCCCTG 60.806 60.000 0.00 0.00 34.70 4.45
658 659 1.255667 ACGAATAGCACGACCCCTGT 61.256 55.000 0.00 0.00 34.70 4.00
659 660 0.806102 CGAATAGCACGACCCCTGTG 60.806 60.000 0.00 0.00 40.32 3.66
664 665 2.347114 CACGACCCCTGTGCATCA 59.653 61.111 0.00 0.00 0.00 3.07
665 666 2.034879 CACGACCCCTGTGCATCAC 61.035 63.158 0.00 0.00 34.56 3.06
666 667 2.217038 ACGACCCCTGTGCATCACT 61.217 57.895 0.00 0.00 35.11 3.41
667 668 1.742880 CGACCCCTGTGCATCACTG 60.743 63.158 0.00 0.00 35.11 3.66
685 686 2.998949 CCTTGTGGCCCCTACTCC 59.001 66.667 0.00 0.00 0.00 3.85
686 687 2.680370 CCTTGTGGCCCCTACTCCC 61.680 68.421 0.00 0.00 0.00 4.30
687 688 1.616628 CTTGTGGCCCCTACTCCCT 60.617 63.158 0.00 0.00 0.00 4.20
688 689 0.326238 CTTGTGGCCCCTACTCCCTA 60.326 60.000 0.00 0.00 0.00 3.53
689 690 0.326238 TTGTGGCCCCTACTCCCTAG 60.326 60.000 0.00 0.00 0.00 3.02
690 691 1.226104 TGTGGCCCCTACTCCCTAGA 61.226 60.000 0.00 0.00 0.00 2.43
691 692 0.031414 GTGGCCCCTACTCCCTAGAA 60.031 60.000 0.00 0.00 0.00 2.10
692 693 0.949582 TGGCCCCTACTCCCTAGAAT 59.050 55.000 0.00 0.00 0.00 2.40
693 694 2.158154 TGGCCCCTACTCCCTAGAATA 58.842 52.381 0.00 0.00 0.00 1.75
694 695 2.111972 TGGCCCCTACTCCCTAGAATAG 59.888 54.545 0.00 0.00 38.80 1.73
695 696 2.382649 GGCCCCTACTCCCTAGAATAGA 59.617 54.545 0.00 0.00 42.77 1.98
748 749 6.397480 CGGAAAAGATTTCGAACGTTTGAATG 60.397 38.462 27.28 5.60 40.09 2.67
809 810 1.670730 TGCATGCACCGATCACGTT 60.671 52.632 18.46 0.00 37.88 3.99
813 814 0.246360 ATGCACCGATCACGTTCAGA 59.754 50.000 0.00 0.00 37.88 3.27
848 849 1.702299 CGCGAACGGTTCAGATGTC 59.298 57.895 19.91 2.00 34.97 3.06
874 882 2.965831 GTCCATAGACCATGTCCTGCTA 59.034 50.000 0.00 0.00 37.00 3.49
882 890 0.254178 CATGTCCTGCTAACTGCCCT 59.746 55.000 0.00 0.00 42.00 5.19
928 939 1.308783 GCTTTCCTTTCTGGCCTCCG 61.309 60.000 3.32 0.00 35.26 4.63
940 951 2.770048 CCTCCGCCTCCCCATTCT 60.770 66.667 0.00 0.00 0.00 2.40
949 960 2.416638 CCTCCCCATTCTCATCTCCTT 58.583 52.381 0.00 0.00 0.00 3.36
989 1012 3.705604 CAGCGAGAGAGAGAAGAAATCC 58.294 50.000 0.00 0.00 0.00 3.01
1142 1176 4.162690 GCCCTCGCCGGTCAGATT 62.163 66.667 1.90 0.00 0.00 2.40
1179 1219 4.587189 CCTCCCCCGTCGATTCGC 62.587 72.222 0.00 0.00 0.00 4.70
1190 1230 2.719979 GATTCGCATGCAGGCTGG 59.280 61.111 22.31 6.86 0.00 4.85
1359 1413 1.135286 CAACTACCGGTTCGAGGTACC 60.135 57.143 15.04 2.73 42.81 3.34
1401 1457 9.425577 CCGCTAAGGGTTTCAATTTTTATTTTA 57.574 29.630 0.00 0.00 35.97 1.52
1433 1497 6.990939 TGCCTTCATTCAGATTCAGAAGATAG 59.009 38.462 0.00 0.00 38.30 2.08
1523 1587 2.982488 AGATCAGGTGGGGGTAATCATC 59.018 50.000 0.00 0.00 0.00 2.92
1525 1589 2.858644 TCAGGTGGGGGTAATCATCTT 58.141 47.619 0.00 0.00 0.00 2.40
1528 1592 3.053693 CAGGTGGGGGTAATCATCTTTCA 60.054 47.826 0.00 0.00 0.00 2.69
1539 1603 6.318900 GGTAATCATCTTTCACCCGATTCTTT 59.681 38.462 0.00 0.00 0.00 2.52
1561 1625 2.681848 CTCTCCAGCGAGCATTTGATTT 59.318 45.455 0.00 0.00 35.94 2.17
1566 1630 3.429085 CAGCGAGCATTTGATTTGTACC 58.571 45.455 0.00 0.00 0.00 3.34
1681 1771 1.275573 ACCGAAGAAGCCAGAACCTAC 59.724 52.381 0.00 0.00 0.00 3.18
1912 2011 1.027357 CAAGCAGTTCTGCACCAAGT 58.973 50.000 23.69 2.32 37.25 3.16
2025 3374 2.250939 CCAGTGGAAAGCGTTCGCA 61.251 57.895 18.95 3.25 34.28 5.10
2179 3547 5.824904 ATGAGAGTGGATGTGCATTTTAC 57.175 39.130 0.00 0.00 0.00 2.01
2217 3586 1.135228 GGCGTTCCAAATGCGGTTTAT 60.135 47.619 0.00 0.00 44.35 1.40
2256 3625 3.801114 AGCTTTCTTTGTTTGGTGGTC 57.199 42.857 0.00 0.00 0.00 4.02
2416 3810 8.725405 TGTTGTAGATTTAAACTGTTGAGTGA 57.275 30.769 0.00 0.00 30.61 3.41
2445 3839 8.372521 CCGCAGTTTTATTTACAAATGAATGTC 58.627 33.333 0.00 0.00 34.75 3.06
2526 3926 5.008217 TGGAAGCATTACTGTACAACAACAC 59.992 40.000 0.00 0.00 0.00 3.32
2537 3939 1.209990 ACAACAACACCCCTACGACAA 59.790 47.619 0.00 0.00 0.00 3.18
2560 3964 7.768120 ACAATCCTTTATTCTAAGCAGACTCTG 59.232 37.037 1.21 1.21 34.12 3.35
2587 3991 8.531146 CAATCCTTACAAATACATGTTCCCTTT 58.469 33.333 2.30 0.00 34.75 3.11
2599 4003 0.251341 TTCCCTTTGAGCCTCCTTGC 60.251 55.000 0.00 0.00 0.00 4.01
2634 4040 8.704849 TGAATAGGAAACAATTCTTGAAGGAA 57.295 30.769 0.00 0.00 35.79 3.36
2680 4086 3.348647 TGCAGCCTCTGTTATTGCTAA 57.651 42.857 0.00 0.00 35.85 3.09
2726 4141 8.360390 TCTAACCATGTGTATCACTGCTAATAG 58.640 37.037 0.00 0.00 35.11 1.73
2773 4188 6.936335 CCATGTGTATCACTGCTAATAATGGA 59.064 38.462 0.00 0.00 31.49 3.41
2775 4190 5.991606 TGTGTATCACTGCTAATAATGGAGC 59.008 40.000 1.72 0.00 35.11 4.70
2821 4236 5.163854 GGTCCACATTATCAGACAAAGTTCG 60.164 44.000 0.00 0.00 0.00 3.95
3032 4467 5.612351 ACCTCAACTTAACTCTGTTTCCTC 58.388 41.667 0.00 0.00 0.00 3.71
3178 6326 2.845659 TCTGCTTATCTTTCCCTCCCA 58.154 47.619 0.00 0.00 0.00 4.37
3282 6511 9.761504 TCTTAAAAGAATGACAAAATTGCATCA 57.238 25.926 0.00 0.00 30.73 3.07
3340 6570 7.164122 GGTACCATGAATGTGTCATATCTGAT 58.836 38.462 7.15 0.00 45.69 2.90
3341 6571 7.663081 GGTACCATGAATGTGTCATATCTGATT 59.337 37.037 7.15 0.00 45.69 2.57
3416 6909 1.277579 TGCCATTTGCCAATGACCAT 58.722 45.000 11.92 0.00 42.35 3.55
3437 6933 6.980978 ACCATCAACACTCGTATTTCATCTAG 59.019 38.462 0.00 0.00 0.00 2.43
3462 6958 6.963117 TCCCTACTTTCCTATTTCTTTCCA 57.037 37.500 0.00 0.00 0.00 3.53
3619 7116 0.954452 GCCTTTTGGGTGACAGACAG 59.046 55.000 0.00 0.00 40.82 3.51
3729 7226 0.852842 TGCCCCATCCTTATTCCCAG 59.147 55.000 0.00 0.00 0.00 4.45
3819 7316 9.922477 TCGTTTCTATGATCATATATACTCCCT 57.078 33.333 15.71 0.00 0.00 4.20
3822 7319 8.926092 TTCTATGATCATATATACTCCCTCCG 57.074 38.462 15.71 0.29 0.00 4.63
3823 7320 8.046867 TCTATGATCATATATACTCCCTCCGT 57.953 38.462 15.71 0.00 0.00 4.69
3824 7321 8.158132 TCTATGATCATATATACTCCCTCCGTC 58.842 40.741 15.71 0.00 0.00 4.79
3825 7322 5.446860 TGATCATATATACTCCCTCCGTCC 58.553 45.833 0.00 0.00 0.00 4.79
3826 7323 3.882444 TCATATATACTCCCTCCGTCCG 58.118 50.000 0.00 0.00 0.00 4.79
3827 7324 3.520721 TCATATATACTCCCTCCGTCCGA 59.479 47.826 0.00 0.00 0.00 4.55
3828 7325 2.965671 ATATACTCCCTCCGTCCGAA 57.034 50.000 0.00 0.00 0.00 4.30
3829 7326 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
3830 7327 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
3831 7328 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
3832 7329 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
3833 7330 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.552848 CAGGCATATGAGGGGTGGTT 59.447 55.000 6.97 0.00 0.00 3.67
1 2 0.624500 ACAGGCATATGAGGGGTGGT 60.625 55.000 6.97 0.00 0.00 4.16
2 3 0.179009 CACAGGCATATGAGGGGTGG 60.179 60.000 6.97 0.00 0.00 4.61
3 4 0.179009 CCACAGGCATATGAGGGGTG 60.179 60.000 6.97 8.35 0.00 4.61
4 5 1.355718 CCCACAGGCATATGAGGGGT 61.356 60.000 6.97 0.00 44.75 4.95
5 6 1.457604 CCCACAGGCATATGAGGGG 59.542 63.158 6.97 5.74 44.75 4.79
16 17 2.357517 GTCGTCACAGCCCACAGG 60.358 66.667 0.00 0.00 0.00 4.00
17 18 2.357517 GGTCGTCACAGCCCACAG 60.358 66.667 0.00 0.00 0.00 3.66
18 19 2.842462 AGGTCGTCACAGCCCACA 60.842 61.111 0.00 0.00 0.00 4.17
19 20 2.048127 GAGGTCGTCACAGCCCAC 60.048 66.667 0.00 0.00 0.00 4.61
20 21 2.523168 TGAGGTCGTCACAGCCCA 60.523 61.111 0.00 0.00 0.00 5.36
21 22 2.262915 CTGAGGTCGTCACAGCCC 59.737 66.667 0.00 0.00 0.00 5.19
22 23 2.262915 CCTGAGGTCGTCACAGCC 59.737 66.667 0.00 0.00 0.00 4.85
23 24 1.080434 GTCCTGAGGTCGTCACAGC 60.080 63.158 0.00 0.00 0.00 4.40
24 25 0.896019 AGGTCCTGAGGTCGTCACAG 60.896 60.000 0.00 0.00 0.00 3.66
25 26 1.153061 AGGTCCTGAGGTCGTCACA 59.847 57.895 0.00 0.00 0.00 3.58
26 27 1.179814 ACAGGTCCTGAGGTCGTCAC 61.180 60.000 26.18 0.00 35.18 3.67
27 28 1.153061 ACAGGTCCTGAGGTCGTCA 59.847 57.895 26.18 0.00 35.18 4.35
28 29 1.179814 ACACAGGTCCTGAGGTCGTC 61.180 60.000 26.18 0.00 35.18 4.20
29 30 0.759436 AACACAGGTCCTGAGGTCGT 60.759 55.000 26.18 10.69 35.18 4.34
30 31 0.319900 CAACACAGGTCCTGAGGTCG 60.320 60.000 26.18 8.77 35.18 4.79
31 32 0.603975 GCAACACAGGTCCTGAGGTC 60.604 60.000 26.18 6.93 35.18 3.85
32 33 1.451936 GCAACACAGGTCCTGAGGT 59.548 57.895 26.18 18.68 35.18 3.85
33 34 1.302832 GGCAACACAGGTCCTGAGG 60.303 63.158 26.18 18.05 35.18 3.86
34 35 1.451504 TGGCAACACAGGTCCTGAG 59.548 57.895 26.18 19.92 46.17 3.35
35 36 3.654021 TGGCAACACAGGTCCTGA 58.346 55.556 26.18 0.00 46.17 3.86
46 47 3.980442 TTATCCCCGCCGTGGCAAC 62.980 63.158 12.06 0.00 42.06 4.17
47 48 3.690685 CTTATCCCCGCCGTGGCAA 62.691 63.158 12.06 0.00 42.06 4.52
48 49 4.169696 CTTATCCCCGCCGTGGCA 62.170 66.667 12.06 0.00 42.06 4.92
49 50 4.929707 CCTTATCCCCGCCGTGGC 62.930 72.222 0.00 0.00 35.87 5.01
50 51 4.929707 GCCTTATCCCCGCCGTGG 62.930 72.222 0.00 0.00 37.55 4.94
51 52 4.929707 GGCCTTATCCCCGCCGTG 62.930 72.222 0.00 0.00 31.92 4.94
53 54 2.119484 TTATGGCCTTATCCCCGCCG 62.119 60.000 3.32 0.00 46.12 6.46
54 55 0.322546 CTTATGGCCTTATCCCCGCC 60.323 60.000 3.32 0.00 43.32 6.13
55 56 0.400594 ACTTATGGCCTTATCCCCGC 59.599 55.000 3.32 0.00 0.00 6.13
56 57 4.569719 AATACTTATGGCCTTATCCCCG 57.430 45.455 3.32 0.00 0.00 5.73
57 58 8.895141 AAATAAATACTTATGGCCTTATCCCC 57.105 34.615 3.32 0.00 0.00 4.81
63 64 7.495606 GCAGCAAAAATAAATACTTATGGCCTT 59.504 33.333 3.32 0.00 0.00 4.35
64 65 6.986231 GCAGCAAAAATAAATACTTATGGCCT 59.014 34.615 3.32 0.00 0.00 5.19
65 66 6.760770 TGCAGCAAAAATAAATACTTATGGCC 59.239 34.615 0.00 0.00 0.00 5.36
66 67 7.769272 TGCAGCAAAAATAAATACTTATGGC 57.231 32.000 0.00 0.00 0.00 4.40
67 68 8.693504 CGATGCAGCAAAAATAAATACTTATGG 58.306 33.333 1.53 0.00 0.00 2.74
68 69 8.209869 GCGATGCAGCAAAAATAAATACTTATG 58.790 33.333 1.53 0.00 37.05 1.90
69 70 7.382218 GGCGATGCAGCAAAAATAAATACTTAT 59.618 33.333 1.53 0.00 39.27 1.73
70 71 6.695278 GGCGATGCAGCAAAAATAAATACTTA 59.305 34.615 1.53 0.00 39.27 2.24
71 72 5.519927 GGCGATGCAGCAAAAATAAATACTT 59.480 36.000 1.53 0.00 39.27 2.24
72 73 5.043248 GGCGATGCAGCAAAAATAAATACT 58.957 37.500 1.53 0.00 39.27 2.12
73 74 4.085619 CGGCGATGCAGCAAAAATAAATAC 60.086 41.667 0.00 0.00 39.27 1.89
74 75 4.041049 CGGCGATGCAGCAAAAATAAATA 58.959 39.130 0.00 0.00 39.27 1.40
75 76 2.859538 CGGCGATGCAGCAAAAATAAAT 59.140 40.909 0.00 0.00 39.27 1.40
76 77 2.257894 CGGCGATGCAGCAAAAATAAA 58.742 42.857 0.00 0.00 39.27 1.40
77 78 1.468908 CCGGCGATGCAGCAAAAATAA 60.469 47.619 9.30 0.00 39.27 1.40
78 79 0.100325 CCGGCGATGCAGCAAAAATA 59.900 50.000 9.30 0.00 39.27 1.40
79 80 1.153784 CCGGCGATGCAGCAAAAAT 60.154 52.632 9.30 0.00 39.27 1.82
80 81 2.257980 CCGGCGATGCAGCAAAAA 59.742 55.556 9.30 0.00 39.27 1.94
81 82 4.418401 GCCGGCGATGCAGCAAAA 62.418 61.111 12.58 0.00 39.27 2.44
98 99 2.166459 TGTCCTCATCTTGTTAGCGGAG 59.834 50.000 0.00 0.00 0.00 4.63
99 100 2.094182 GTGTCCTCATCTTGTTAGCGGA 60.094 50.000 0.00 0.00 0.00 5.54
100 101 2.271800 GTGTCCTCATCTTGTTAGCGG 58.728 52.381 0.00 0.00 0.00 5.52
101 102 2.271800 GGTGTCCTCATCTTGTTAGCG 58.728 52.381 0.00 0.00 0.00 4.26
102 103 3.055819 TCTGGTGTCCTCATCTTGTTAGC 60.056 47.826 0.00 0.00 0.00 3.09
103 104 4.808414 TCTGGTGTCCTCATCTTGTTAG 57.192 45.455 0.00 0.00 0.00 2.34
104 105 5.248248 TGATTCTGGTGTCCTCATCTTGTTA 59.752 40.000 0.00 0.00 0.00 2.41
105 106 4.042062 TGATTCTGGTGTCCTCATCTTGTT 59.958 41.667 0.00 0.00 0.00 2.83
106 107 3.584406 TGATTCTGGTGTCCTCATCTTGT 59.416 43.478 0.00 0.00 0.00 3.16
107 108 4.212143 TGATTCTGGTGTCCTCATCTTG 57.788 45.455 0.00 0.00 0.00 3.02
108 109 4.472470 TGATGATTCTGGTGTCCTCATCTT 59.528 41.667 10.98 1.59 41.65 2.40
109 110 4.035814 TGATGATTCTGGTGTCCTCATCT 58.964 43.478 10.98 0.00 41.65 2.90
110 111 4.412796 TGATGATTCTGGTGTCCTCATC 57.587 45.455 0.00 0.00 41.53 2.92
111 112 4.226846 AGTTGATGATTCTGGTGTCCTCAT 59.773 41.667 0.00 0.00 0.00 2.90
112 113 3.584406 AGTTGATGATTCTGGTGTCCTCA 59.416 43.478 0.00 0.00 0.00 3.86
113 114 4.213564 AGTTGATGATTCTGGTGTCCTC 57.786 45.455 0.00 0.00 0.00 3.71
114 115 4.647564 AAGTTGATGATTCTGGTGTCCT 57.352 40.909 0.00 0.00 0.00 3.85
115 116 5.491982 AGTAAGTTGATGATTCTGGTGTCC 58.508 41.667 0.00 0.00 0.00 4.02
116 117 6.402222 AGAGTAAGTTGATGATTCTGGTGTC 58.598 40.000 0.00 0.00 0.00 3.67
117 118 6.212388 AGAGAGTAAGTTGATGATTCTGGTGT 59.788 38.462 0.00 0.00 0.00 4.16
118 119 6.638610 AGAGAGTAAGTTGATGATTCTGGTG 58.361 40.000 0.00 0.00 0.00 4.17
119 120 6.127196 GGAGAGAGTAAGTTGATGATTCTGGT 60.127 42.308 0.00 0.00 0.00 4.00
120 121 6.279882 GGAGAGAGTAAGTTGATGATTCTGG 58.720 44.000 0.00 0.00 0.00 3.86
121 122 5.976534 CGGAGAGAGTAAGTTGATGATTCTG 59.023 44.000 0.00 0.00 0.00 3.02
122 123 5.654650 ACGGAGAGAGTAAGTTGATGATTCT 59.345 40.000 0.00 0.00 0.00 2.40
123 124 5.897050 ACGGAGAGAGTAAGTTGATGATTC 58.103 41.667 0.00 0.00 0.00 2.52
124 125 5.163499 GGACGGAGAGAGTAAGTTGATGATT 60.163 44.000 0.00 0.00 0.00 2.57
125 126 4.339814 GGACGGAGAGAGTAAGTTGATGAT 59.660 45.833 0.00 0.00 0.00 2.45
126 127 3.695060 GGACGGAGAGAGTAAGTTGATGA 59.305 47.826 0.00 0.00 0.00 2.92
127 128 3.487711 CGGACGGAGAGAGTAAGTTGATG 60.488 52.174 0.00 0.00 0.00 3.07
128 129 2.683867 CGGACGGAGAGAGTAAGTTGAT 59.316 50.000 0.00 0.00 0.00 2.57
129 130 2.082231 CGGACGGAGAGAGTAAGTTGA 58.918 52.381 0.00 0.00 0.00 3.18
130 131 1.811359 ACGGACGGAGAGAGTAAGTTG 59.189 52.381 0.00 0.00 0.00 3.16
131 132 1.811359 CACGGACGGAGAGAGTAAGTT 59.189 52.381 0.00 0.00 0.00 2.66
132 133 1.271271 ACACGGACGGAGAGAGTAAGT 60.271 52.381 0.00 0.00 0.00 2.24
133 134 1.451067 ACACGGACGGAGAGAGTAAG 58.549 55.000 0.00 0.00 0.00 2.34
134 135 1.901591 AACACGGACGGAGAGAGTAA 58.098 50.000 0.00 0.00 0.00 2.24
135 136 1.901591 AAACACGGACGGAGAGAGTA 58.098 50.000 0.00 0.00 0.00 2.59
136 137 1.901591 TAAACACGGACGGAGAGAGT 58.098 50.000 0.00 0.00 0.00 3.24
137 138 2.422479 TCATAAACACGGACGGAGAGAG 59.578 50.000 0.00 0.00 0.00 3.20
138 139 2.439409 TCATAAACACGGACGGAGAGA 58.561 47.619 0.00 0.00 0.00 3.10
139 140 2.933495 TCATAAACACGGACGGAGAG 57.067 50.000 0.00 0.00 0.00 3.20
140 141 2.673043 GCTTCATAAACACGGACGGAGA 60.673 50.000 0.00 0.00 0.00 3.71
141 142 1.659098 GCTTCATAAACACGGACGGAG 59.341 52.381 0.00 0.00 0.00 4.63
142 143 1.673626 GGCTTCATAAACACGGACGGA 60.674 52.381 0.00 0.00 0.00 4.69
143 144 0.725117 GGCTTCATAAACACGGACGG 59.275 55.000 0.00 0.00 0.00 4.79
144 145 0.725117 GGGCTTCATAAACACGGACG 59.275 55.000 0.00 0.00 0.00 4.79
145 146 1.092348 GGGGCTTCATAAACACGGAC 58.908 55.000 0.00 0.00 0.00 4.79
146 147 0.034863 GGGGGCTTCATAAACACGGA 60.035 55.000 0.00 0.00 0.00 4.69
147 148 0.034477 AGGGGGCTTCATAAACACGG 60.034 55.000 0.00 0.00 0.00 4.94
148 149 1.339631 TGAGGGGGCTTCATAAACACG 60.340 52.381 0.00 0.00 0.00 4.49
149 150 2.092323 GTGAGGGGGCTTCATAAACAC 58.908 52.381 0.00 0.00 0.00 3.32
150 151 1.707989 TGTGAGGGGGCTTCATAAACA 59.292 47.619 0.00 0.00 0.00 2.83
151 152 2.507407 TGTGAGGGGGCTTCATAAAC 57.493 50.000 0.00 0.00 0.00 2.01
152 153 3.756082 AATGTGAGGGGGCTTCATAAA 57.244 42.857 0.00 0.00 0.00 1.40
153 154 3.756082 AAATGTGAGGGGGCTTCATAA 57.244 42.857 0.00 0.00 0.00 1.90
154 155 3.756082 AAAATGTGAGGGGGCTTCATA 57.244 42.857 0.00 0.00 0.00 2.15
155 156 2.568509 CAAAAATGTGAGGGGGCTTCAT 59.431 45.455 0.00 0.00 0.00 2.57
156 157 1.969923 CAAAAATGTGAGGGGGCTTCA 59.030 47.619 0.00 0.00 0.00 3.02
157 158 2.232208 CTCAAAAATGTGAGGGGGCTTC 59.768 50.000 0.00 0.00 41.21 3.86
158 159 2.250924 CTCAAAAATGTGAGGGGGCTT 58.749 47.619 0.00 0.00 41.21 4.35
159 160 1.928868 CTCAAAAATGTGAGGGGGCT 58.071 50.000 0.00 0.00 41.21 5.19
166 167 8.307483 TGGTCAAACTTTAACTCAAAAATGTGA 58.693 29.630 0.00 0.00 0.00 3.58
167 168 8.472683 TGGTCAAACTTTAACTCAAAAATGTG 57.527 30.769 0.00 0.00 0.00 3.21
168 169 9.665719 AATGGTCAAACTTTAACTCAAAAATGT 57.334 25.926 0.00 0.00 0.00 2.71
170 171 9.883142 TGAATGGTCAAACTTTAACTCAAAAAT 57.117 25.926 0.00 0.00 0.00 1.82
171 172 9.883142 ATGAATGGTCAAACTTTAACTCAAAAA 57.117 25.926 0.00 0.00 37.30 1.94
172 173 9.883142 AATGAATGGTCAAACTTTAACTCAAAA 57.117 25.926 0.00 0.00 37.30 2.44
173 174 9.883142 AAATGAATGGTCAAACTTTAACTCAAA 57.117 25.926 0.00 0.00 37.30 2.69
175 176 9.959749 GTAAATGAATGGTCAAACTTTAACTCA 57.040 29.630 0.00 0.00 37.30 3.41
176 177 9.113876 CGTAAATGAATGGTCAAACTTTAACTC 57.886 33.333 0.00 0.00 37.30 3.01
177 178 8.626526 ACGTAAATGAATGGTCAAACTTTAACT 58.373 29.630 0.00 0.00 37.30 2.24
178 179 8.791355 ACGTAAATGAATGGTCAAACTTTAAC 57.209 30.769 0.00 0.00 37.30 2.01
210 211 9.574516 GGTTCTTCTACATATGACCCATATTTT 57.425 33.333 10.38 0.00 35.18 1.82
211 212 7.878127 CGGTTCTTCTACATATGACCCATATTT 59.122 37.037 10.38 0.00 35.18 1.40
212 213 7.386851 CGGTTCTTCTACATATGACCCATATT 58.613 38.462 10.38 0.00 35.18 1.28
213 214 6.070767 CCGGTTCTTCTACATATGACCCATAT 60.071 42.308 10.38 0.00 37.51 1.78
214 215 5.245301 CCGGTTCTTCTACATATGACCCATA 59.755 44.000 10.38 0.00 0.00 2.74
215 216 4.040461 CCGGTTCTTCTACATATGACCCAT 59.960 45.833 10.38 0.00 0.00 4.00
216 217 3.386726 CCGGTTCTTCTACATATGACCCA 59.613 47.826 10.38 0.00 0.00 4.51
217 218 3.387050 ACCGGTTCTTCTACATATGACCC 59.613 47.826 10.38 0.00 0.00 4.46
218 219 4.667519 ACCGGTTCTTCTACATATGACC 57.332 45.455 10.38 3.55 0.00 4.02
219 220 6.978338 TGATACCGGTTCTTCTACATATGAC 58.022 40.000 15.04 0.00 0.00 3.06
220 221 7.776618 ATGATACCGGTTCTTCTACATATGA 57.223 36.000 15.04 0.00 0.00 2.15
221 222 7.331934 CCAATGATACCGGTTCTTCTACATATG 59.668 40.741 15.04 0.00 0.00 1.78
222 223 7.234782 TCCAATGATACCGGTTCTTCTACATAT 59.765 37.037 15.04 0.00 0.00 1.78
223 224 6.551975 TCCAATGATACCGGTTCTTCTACATA 59.448 38.462 15.04 0.00 0.00 2.29
224 225 5.365605 TCCAATGATACCGGTTCTTCTACAT 59.634 40.000 15.04 0.00 0.00 2.29
225 226 4.712829 TCCAATGATACCGGTTCTTCTACA 59.287 41.667 15.04 3.44 0.00 2.74
226 227 5.272283 TCCAATGATACCGGTTCTTCTAC 57.728 43.478 15.04 0.00 0.00 2.59
227 228 5.943349 TTCCAATGATACCGGTTCTTCTA 57.057 39.130 15.04 0.00 0.00 2.10
228 229 4.837093 TTCCAATGATACCGGTTCTTCT 57.163 40.909 15.04 0.00 0.00 2.85
229 230 4.941873 AGTTTCCAATGATACCGGTTCTTC 59.058 41.667 15.04 8.76 0.00 2.87
230 231 4.918588 AGTTTCCAATGATACCGGTTCTT 58.081 39.130 15.04 5.89 0.00 2.52
231 232 4.569719 AGTTTCCAATGATACCGGTTCT 57.430 40.909 15.04 0.00 0.00 3.01
232 233 4.698304 TGAAGTTTCCAATGATACCGGTTC 59.302 41.667 15.04 11.20 0.00 3.62
233 234 4.658063 TGAAGTTTCCAATGATACCGGTT 58.342 39.130 15.04 0.00 0.00 4.44
234 235 4.295141 TGAAGTTTCCAATGATACCGGT 57.705 40.909 13.98 13.98 0.00 5.28
235 236 5.504010 CGAATGAAGTTTCCAATGATACCGG 60.504 44.000 0.00 0.00 0.00 5.28
236 237 5.293324 TCGAATGAAGTTTCCAATGATACCG 59.707 40.000 0.00 0.00 0.00 4.02
237 238 6.677781 TCGAATGAAGTTTCCAATGATACC 57.322 37.500 0.00 0.00 0.00 2.73
238 239 9.651718 GTATTCGAATGAAGTTTCCAATGATAC 57.348 33.333 20.87 0.69 37.57 2.24
239 240 9.389755 TGTATTCGAATGAAGTTTCCAATGATA 57.610 29.630 20.87 0.00 37.57 2.15
240 241 8.279970 TGTATTCGAATGAAGTTTCCAATGAT 57.720 30.769 20.87 0.00 37.57 2.45
241 242 7.680442 TGTATTCGAATGAAGTTTCCAATGA 57.320 32.000 20.87 0.00 37.57 2.57
242 243 8.638565 GTTTGTATTCGAATGAAGTTTCCAATG 58.361 33.333 20.87 0.00 37.57 2.82
243 244 7.812669 GGTTTGTATTCGAATGAAGTTTCCAAT 59.187 33.333 20.87 0.00 37.57 3.16
244 245 7.142680 GGTTTGTATTCGAATGAAGTTTCCAA 58.857 34.615 20.87 7.36 37.57 3.53
245 246 6.294286 GGGTTTGTATTCGAATGAAGTTTCCA 60.294 38.462 20.87 0.00 37.57 3.53
246 247 6.090783 GGGTTTGTATTCGAATGAAGTTTCC 58.909 40.000 20.87 12.76 37.57 3.13
247 248 6.581166 GTGGGTTTGTATTCGAATGAAGTTTC 59.419 38.462 20.87 6.41 37.57 2.78
248 249 6.039941 TGTGGGTTTGTATTCGAATGAAGTTT 59.960 34.615 20.87 0.00 37.57 2.66
249 250 5.533154 TGTGGGTTTGTATTCGAATGAAGTT 59.467 36.000 20.87 0.00 37.57 2.66
250 251 5.067273 TGTGGGTTTGTATTCGAATGAAGT 58.933 37.500 20.87 0.00 37.57 3.01
251 252 5.621197 TGTGGGTTTGTATTCGAATGAAG 57.379 39.130 20.87 0.00 37.57 3.02
252 253 6.210078 GTTTGTGGGTTTGTATTCGAATGAA 58.790 36.000 20.87 10.23 38.76 2.57
253 254 5.278561 GGTTTGTGGGTTTGTATTCGAATGA 60.279 40.000 20.87 4.27 0.00 2.57
254 255 4.920927 GGTTTGTGGGTTTGTATTCGAATG 59.079 41.667 20.87 0.00 0.00 2.67
255 256 4.021807 GGGTTTGTGGGTTTGTATTCGAAT 60.022 41.667 16.15 16.15 0.00 3.34
256 257 3.318557 GGGTTTGTGGGTTTGTATTCGAA 59.681 43.478 0.00 0.00 0.00 3.71
257 258 2.885894 GGGTTTGTGGGTTTGTATTCGA 59.114 45.455 0.00 0.00 0.00 3.71
258 259 2.623889 TGGGTTTGTGGGTTTGTATTCG 59.376 45.455 0.00 0.00 0.00 3.34
259 260 4.674281 TTGGGTTTGTGGGTTTGTATTC 57.326 40.909 0.00 0.00 0.00 1.75
260 261 6.749036 TTATTGGGTTTGTGGGTTTGTATT 57.251 33.333 0.00 0.00 0.00 1.89
261 262 6.943899 ATTATTGGGTTTGTGGGTTTGTAT 57.056 33.333 0.00 0.00 0.00 2.29
262 263 9.716556 ATATATTATTGGGTTTGTGGGTTTGTA 57.283 29.630 0.00 0.00 0.00 2.41
263 264 6.943899 ATATTATTGGGTTTGTGGGTTTGT 57.056 33.333 0.00 0.00 0.00 2.83
264 265 9.898152 AAATATATTATTGGGTTTGTGGGTTTG 57.102 29.630 0.00 0.00 0.00 2.93
266 267 9.898152 CAAAATATATTATTGGGTTTGTGGGTT 57.102 29.630 0.00 0.00 0.00 4.11
267 268 9.052365 ACAAAATATATTATTGGGTTTGTGGGT 57.948 29.630 17.25 0.00 36.61 4.51
288 289 9.979578 AAAATACAAGCAATCTGTCATACAAAA 57.020 25.926 0.00 0.00 0.00 2.44
289 290 9.409312 CAAAATACAAGCAATCTGTCATACAAA 57.591 29.630 0.00 0.00 0.00 2.83
290 291 7.541783 GCAAAATACAAGCAATCTGTCATACAA 59.458 33.333 0.00 0.00 0.00 2.41
291 292 7.028962 GCAAAATACAAGCAATCTGTCATACA 58.971 34.615 0.00 0.00 0.00 2.29
292 293 7.028962 TGCAAAATACAAGCAATCTGTCATAC 58.971 34.615 0.00 0.00 34.97 2.39
293 294 7.155655 TGCAAAATACAAGCAATCTGTCATA 57.844 32.000 0.00 0.00 34.97 2.15
294 295 6.028146 TGCAAAATACAAGCAATCTGTCAT 57.972 33.333 0.00 0.00 34.97 3.06
295 296 5.450592 TGCAAAATACAAGCAATCTGTCA 57.549 34.783 0.00 0.00 34.97 3.58
296 297 6.768029 TTTGCAAAATACAAGCAATCTGTC 57.232 33.333 10.02 0.00 46.32 3.51
297 298 7.733402 ATTTTGCAAAATACAAGCAATCTGT 57.267 28.000 31.00 7.28 46.32 3.41
304 305 9.459276 CGTACATTTATTTTGCAAAATACAAGC 57.541 29.630 33.73 22.53 39.75 4.01
305 306 9.950858 CCGTACATTTATTTTGCAAAATACAAG 57.049 29.630 33.73 27.63 39.75 3.16
306 307 9.477484 ACCGTACATTTATTTTGCAAAATACAA 57.523 25.926 33.73 28.61 39.75 2.41
307 308 9.477484 AACCGTACATTTATTTTGCAAAATACA 57.523 25.926 33.73 29.40 39.75 2.29
308 309 9.946418 GAACCGTACATTTATTTTGCAAAATAC 57.054 29.630 33.73 25.22 39.75 1.89
309 310 9.692749 TGAACCGTACATTTATTTTGCAAAATA 57.307 25.926 31.38 31.38 39.24 1.40
310 311 8.594881 TGAACCGTACATTTATTTTGCAAAAT 57.405 26.923 33.26 33.26 41.24 1.82
311 312 8.420374 TTGAACCGTACATTTATTTTGCAAAA 57.580 26.923 25.76 25.76 0.00 2.44
312 313 8.420374 TTTGAACCGTACATTTATTTTGCAAA 57.580 26.923 8.05 8.05 0.00 3.68
313 314 7.707035 ACTTTGAACCGTACATTTATTTTGCAA 59.293 29.630 0.00 0.00 0.00 4.08
314 315 7.203910 ACTTTGAACCGTACATTTATTTTGCA 58.796 30.769 0.00 0.00 0.00 4.08
315 316 7.631915 ACTTTGAACCGTACATTTATTTTGC 57.368 32.000 0.00 0.00 0.00 3.68
319 320 9.681692 GGTTAAACTTTGAACCGTACATTTATT 57.318 29.630 0.00 0.00 36.05 1.40
334 335 9.389570 CGTCCTTGTATTTTAGGTTAAACTTTG 57.610 33.333 0.00 0.00 33.15 2.77
335 336 8.570488 CCGTCCTTGTATTTTAGGTTAAACTTT 58.430 33.333 0.00 0.00 33.15 2.66
336 337 7.938490 TCCGTCCTTGTATTTTAGGTTAAACTT 59.062 33.333 0.00 0.00 33.15 2.66
337 338 7.452562 TCCGTCCTTGTATTTTAGGTTAAACT 58.547 34.615 0.00 0.00 33.15 2.66
338 339 7.148356 CCTCCGTCCTTGTATTTTAGGTTAAAC 60.148 40.741 0.00 0.00 33.15 2.01
339 340 6.880529 CCTCCGTCCTTGTATTTTAGGTTAAA 59.119 38.462 0.00 0.00 33.15 1.52
340 341 6.013466 ACCTCCGTCCTTGTATTTTAGGTTAA 60.013 38.462 0.00 0.00 30.79 2.01
341 342 5.484998 ACCTCCGTCCTTGTATTTTAGGTTA 59.515 40.000 0.00 0.00 30.79 2.85
342 343 4.287845 ACCTCCGTCCTTGTATTTTAGGTT 59.712 41.667 0.00 0.00 30.79 3.50
343 344 3.842436 ACCTCCGTCCTTGTATTTTAGGT 59.158 43.478 0.00 0.00 33.15 3.08
344 345 4.482952 ACCTCCGTCCTTGTATTTTAGG 57.517 45.455 0.00 0.00 0.00 2.69
345 346 6.218108 ACTACCTCCGTCCTTGTATTTTAG 57.782 41.667 0.00 0.00 0.00 1.85
346 347 6.096846 GGTACTACCTCCGTCCTTGTATTTTA 59.903 42.308 0.00 0.00 34.73 1.52
347 348 5.105187 GGTACTACCTCCGTCCTTGTATTTT 60.105 44.000 0.00 0.00 34.73 1.82
348 349 4.403752 GGTACTACCTCCGTCCTTGTATTT 59.596 45.833 0.00 0.00 34.73 1.40
349 350 3.956848 GGTACTACCTCCGTCCTTGTATT 59.043 47.826 0.00 0.00 34.73 1.89
350 351 3.560105 GGTACTACCTCCGTCCTTGTAT 58.440 50.000 0.00 0.00 34.73 2.29
351 352 2.680805 CGGTACTACCTCCGTCCTTGTA 60.681 54.545 3.68 0.00 41.58 2.41
352 353 1.844687 GGTACTACCTCCGTCCTTGT 58.155 55.000 0.00 0.00 34.73 3.16
353 354 0.737219 CGGTACTACCTCCGTCCTTG 59.263 60.000 3.68 0.00 41.58 3.61
354 355 3.181526 CGGTACTACCTCCGTCCTT 57.818 57.895 3.68 0.00 41.58 3.36
355 356 2.900671 GGCGGTACTACCTCCGTCCT 62.901 65.000 3.68 0.00 44.64 3.85
356 357 2.484928 GGCGGTACTACCTCCGTCC 61.485 68.421 3.68 3.94 44.64 4.79
357 358 2.484928 GGGCGGTACTACCTCCGTC 61.485 68.421 7.98 2.63 44.06 4.79
358 359 2.440980 GGGCGGTACTACCTCCGT 60.441 66.667 7.98 0.00 44.06 4.69
359 360 2.123982 AGGGCGGTACTACCTCCG 60.124 66.667 7.98 0.00 44.06 4.63
360 361 1.380920 ACAGGGCGGTACTACCTCC 60.381 63.158 5.76 5.76 42.40 4.30
361 362 1.814527 CACAGGGCGGTACTACCTC 59.185 63.158 3.68 0.00 35.66 3.85
362 363 2.356780 GCACAGGGCGGTACTACCT 61.357 63.158 3.68 1.95 35.66 3.08
363 364 2.186125 GCACAGGGCGGTACTACC 59.814 66.667 0.00 0.00 34.05 3.18
372 373 3.446570 GGCAGTGATGCACAGGGC 61.447 66.667 2.29 0.00 45.13 5.19
373 374 0.035152 TAAGGCAGTGATGCACAGGG 60.035 55.000 2.29 0.00 36.74 4.45
374 375 1.674441 CATAAGGCAGTGATGCACAGG 59.326 52.381 2.29 0.00 36.74 4.00
375 376 1.674441 CCATAAGGCAGTGATGCACAG 59.326 52.381 2.29 0.00 36.74 3.66
376 377 1.004628 ACCATAAGGCAGTGATGCACA 59.995 47.619 2.29 0.00 39.06 4.57
377 378 1.755179 ACCATAAGGCAGTGATGCAC 58.245 50.000 2.29 0.00 39.06 4.57
378 379 2.093890 CAACCATAAGGCAGTGATGCA 58.906 47.619 2.29 0.00 39.06 3.96
379 380 2.094675 ACAACCATAAGGCAGTGATGC 58.905 47.619 0.00 0.00 39.06 3.91
380 381 2.424601 CCACAACCATAAGGCAGTGATG 59.575 50.000 10.08 0.00 42.44 3.07
381 382 2.621407 CCCACAACCATAAGGCAGTGAT 60.621 50.000 10.08 0.00 42.44 3.06
382 383 1.271871 CCCACAACCATAAGGCAGTGA 60.272 52.381 10.08 0.00 42.44 3.41
383 384 1.176527 CCCACAACCATAAGGCAGTG 58.823 55.000 3.20 3.20 40.65 3.66
384 385 0.611896 GCCCACAACCATAAGGCAGT 60.612 55.000 0.00 0.00 43.32 4.40
385 386 1.322538 GGCCCACAACCATAAGGCAG 61.323 60.000 0.00 0.00 45.72 4.85
386 387 1.304879 GGCCCACAACCATAAGGCA 60.305 57.895 0.00 0.00 45.72 4.75
387 388 0.687427 ATGGCCCACAACCATAAGGC 60.687 55.000 0.00 0.00 46.20 4.35
388 389 2.746279 TATGGCCCACAACCATAAGG 57.254 50.000 0.00 0.00 46.20 2.69
391 392 1.493022 GGAGTATGGCCCACAACCATA 59.507 52.381 0.00 0.00 46.20 2.74
393 394 1.688811 GGAGTATGGCCCACAACCA 59.311 57.895 0.00 0.00 42.61 3.67
394 395 1.076995 GGGAGTATGGCCCACAACC 60.077 63.158 0.00 6.31 45.31 3.77
395 396 4.657952 GGGAGTATGGCCCACAAC 57.342 61.111 0.00 0.00 45.31 3.32
400 401 1.057471 GGTTCTAGGGAGTATGGCCC 58.943 60.000 0.00 0.00 46.40 5.80
401 402 1.057471 GGGTTCTAGGGAGTATGGCC 58.943 60.000 0.00 0.00 0.00 5.36
402 403 1.057471 GGGGTTCTAGGGAGTATGGC 58.943 60.000 0.00 0.00 0.00 4.40
403 404 2.610873 GAGGGGTTCTAGGGAGTATGG 58.389 57.143 0.00 0.00 0.00 2.74
404 405 2.180308 AGGAGGGGTTCTAGGGAGTATG 59.820 54.545 0.00 0.00 0.00 2.39
405 406 2.526817 AGGAGGGGTTCTAGGGAGTAT 58.473 52.381 0.00 0.00 0.00 2.12
406 407 2.012168 AGGAGGGGTTCTAGGGAGTA 57.988 55.000 0.00 0.00 0.00 2.59
407 408 1.102938 AAGGAGGGGTTCTAGGGAGT 58.897 55.000 0.00 0.00 0.00 3.85
408 409 1.501582 CAAGGAGGGGTTCTAGGGAG 58.498 60.000 0.00 0.00 0.00 4.30
409 410 0.620700 GCAAGGAGGGGTTCTAGGGA 60.621 60.000 0.00 0.00 0.00 4.20
410 411 1.915983 GCAAGGAGGGGTTCTAGGG 59.084 63.158 0.00 0.00 0.00 3.53
411 412 1.522569 CGCAAGGAGGGGTTCTAGG 59.477 63.158 0.00 0.00 0.00 3.02
434 435 4.096003 TGCAGGGTAGCGAAGGGC 62.096 66.667 0.00 0.00 44.05 5.19
435 436 2.125106 GTGCAGGGTAGCGAAGGG 60.125 66.667 0.00 0.00 37.31 3.95
436 437 2.125106 GGTGCAGGGTAGCGAAGG 60.125 66.667 0.00 0.00 37.31 3.46
437 438 1.448540 CTGGTGCAGGGTAGCGAAG 60.449 63.158 0.00 0.00 37.31 3.79
438 439 2.662596 CTGGTGCAGGGTAGCGAA 59.337 61.111 0.00 0.00 37.31 4.70
447 448 2.034687 CCCCTTCACCTGGTGCAG 59.965 66.667 22.02 19.92 32.98 4.41
448 449 1.063070 TAACCCCTTCACCTGGTGCA 61.063 55.000 22.02 10.72 32.98 4.57
449 450 0.111639 TTAACCCCTTCACCTGGTGC 59.888 55.000 22.02 0.00 32.98 5.01
450 451 2.668144 TTTAACCCCTTCACCTGGTG 57.332 50.000 20.86 20.86 31.32 4.17
451 452 3.915346 AATTTAACCCCTTCACCTGGT 57.085 42.857 0.00 0.00 0.00 4.00
452 453 5.304778 CAAAAATTTAACCCCTTCACCTGG 58.695 41.667 0.00 0.00 0.00 4.45
453 454 5.071115 TCCAAAAATTTAACCCCTTCACCTG 59.929 40.000 0.00 0.00 0.00 4.00
454 455 5.220521 TCCAAAAATTTAACCCCTTCACCT 58.779 37.500 0.00 0.00 0.00 4.00
455 456 5.305902 TCTCCAAAAATTTAACCCCTTCACC 59.694 40.000 0.00 0.00 0.00 4.02
456 457 6.413783 TCTCCAAAAATTTAACCCCTTCAC 57.586 37.500 0.00 0.00 0.00 3.18
457 458 5.011635 GCTCTCCAAAAATTTAACCCCTTCA 59.988 40.000 0.00 0.00 0.00 3.02
458 459 5.479306 GCTCTCCAAAAATTTAACCCCTTC 58.521 41.667 0.00 0.00 0.00 3.46
459 460 4.021456 CGCTCTCCAAAAATTTAACCCCTT 60.021 41.667 0.00 0.00 0.00 3.95
460 461 3.509967 CGCTCTCCAAAAATTTAACCCCT 59.490 43.478 0.00 0.00 0.00 4.79
461 462 3.845178 CGCTCTCCAAAAATTTAACCCC 58.155 45.455 0.00 0.00 0.00 4.95
462 463 3.250744 GCGCTCTCCAAAAATTTAACCC 58.749 45.455 0.00 0.00 0.00 4.11
463 464 3.056821 AGGCGCTCTCCAAAAATTTAACC 60.057 43.478 7.64 0.00 0.00 2.85
464 465 4.166523 GAGGCGCTCTCCAAAAATTTAAC 58.833 43.478 7.64 0.00 36.52 2.01
465 466 3.119990 CGAGGCGCTCTCCAAAAATTTAA 60.120 43.478 7.64 0.00 39.30 1.52
466 467 2.418628 CGAGGCGCTCTCCAAAAATTTA 59.581 45.455 7.64 0.00 39.30 1.40
467 468 1.200020 CGAGGCGCTCTCCAAAAATTT 59.800 47.619 7.64 0.00 39.30 1.82
468 469 0.804989 CGAGGCGCTCTCCAAAAATT 59.195 50.000 7.64 0.00 39.30 1.82
469 470 0.036388 TCGAGGCGCTCTCCAAAAAT 60.036 50.000 7.64 0.00 39.30 1.82
470 471 0.670546 CTCGAGGCGCTCTCCAAAAA 60.671 55.000 7.64 0.00 39.30 1.94
471 472 1.079819 CTCGAGGCGCTCTCCAAAA 60.080 57.895 7.64 0.00 39.30 2.44
472 473 2.573869 CTCGAGGCGCTCTCCAAA 59.426 61.111 7.64 0.00 39.30 3.28
473 474 3.452786 CCTCGAGGCGCTCTCCAA 61.453 66.667 20.67 1.77 39.30 3.53
483 484 4.544689 CGAGCAGTCGCCTCGAGG 62.545 72.222 27.83 27.83 39.88 4.63
484 485 4.544689 CCGAGCAGTCGCCTCGAG 62.545 72.222 5.13 5.13 45.41 4.04
487 488 4.443266 AAGCCGAGCAGTCGCCTC 62.443 66.667 0.00 0.00 45.41 4.70
488 489 4.443266 GAAGCCGAGCAGTCGCCT 62.443 66.667 0.00 0.00 45.41 5.52
491 492 2.430921 AACGAAGCCGAGCAGTCG 60.431 61.111 15.28 15.28 46.39 4.18
492 493 2.095252 GGAACGAAGCCGAGCAGTC 61.095 63.158 0.00 0.00 39.50 3.51
493 494 2.048127 GGAACGAAGCCGAGCAGT 60.048 61.111 0.00 0.00 39.50 4.40
494 495 2.048222 TGGAACGAAGCCGAGCAG 60.048 61.111 0.00 0.00 39.50 4.24
495 496 2.357034 GTGGAACGAAGCCGAGCA 60.357 61.111 0.00 0.00 39.50 4.26
506 507 4.753107 TGGAAGTAGTTGAATTCGTGGAAC 59.247 41.667 0.04 0.00 0.00 3.62
507 508 4.963373 TGGAAGTAGTTGAATTCGTGGAA 58.037 39.130 0.04 0.00 0.00 3.53
508 509 4.610605 TGGAAGTAGTTGAATTCGTGGA 57.389 40.909 0.04 0.00 0.00 4.02
509 510 4.935205 TCATGGAAGTAGTTGAATTCGTGG 59.065 41.667 0.04 0.00 0.00 4.94
510 511 5.639506 AGTCATGGAAGTAGTTGAATTCGTG 59.360 40.000 0.04 0.00 0.00 4.35
511 512 5.794894 AGTCATGGAAGTAGTTGAATTCGT 58.205 37.500 0.04 0.00 0.00 3.85
512 513 6.727824 AAGTCATGGAAGTAGTTGAATTCG 57.272 37.500 0.04 0.00 0.00 3.34
513 514 6.590292 TCGAAGTCATGGAAGTAGTTGAATTC 59.410 38.462 0.00 0.00 38.89 2.17
514 515 6.369065 GTCGAAGTCATGGAAGTAGTTGAATT 59.631 38.462 0.00 0.00 0.00 2.17
515 516 5.869888 GTCGAAGTCATGGAAGTAGTTGAAT 59.130 40.000 0.00 0.00 0.00 2.57
516 517 5.010719 AGTCGAAGTCATGGAAGTAGTTGAA 59.989 40.000 0.00 0.00 0.00 2.69
517 518 4.523173 AGTCGAAGTCATGGAAGTAGTTGA 59.477 41.667 0.00 0.00 0.00 3.18
518 519 4.810790 AGTCGAAGTCATGGAAGTAGTTG 58.189 43.478 0.00 0.00 0.00 3.16
519 520 4.082136 GGAGTCGAAGTCATGGAAGTAGTT 60.082 45.833 0.00 0.00 0.00 2.24
520 521 3.444388 GGAGTCGAAGTCATGGAAGTAGT 59.556 47.826 0.00 0.00 0.00 2.73
521 522 3.697045 AGGAGTCGAAGTCATGGAAGTAG 59.303 47.826 0.00 0.00 0.00 2.57
522 523 3.698289 AGGAGTCGAAGTCATGGAAGTA 58.302 45.455 0.00 0.00 0.00 2.24
523 524 2.530701 AGGAGTCGAAGTCATGGAAGT 58.469 47.619 0.00 0.00 0.00 3.01
524 525 4.927978 ATAGGAGTCGAAGTCATGGAAG 57.072 45.455 0.00 0.00 0.00 3.46
525 526 5.661458 GAAATAGGAGTCGAAGTCATGGAA 58.339 41.667 0.00 0.00 0.00 3.53
526 527 4.202020 CGAAATAGGAGTCGAAGTCATGGA 60.202 45.833 0.00 0.00 39.64 3.41
527 528 4.045104 CGAAATAGGAGTCGAAGTCATGG 58.955 47.826 0.00 0.00 39.64 3.66
528 529 3.487574 GCGAAATAGGAGTCGAAGTCATG 59.512 47.826 0.00 0.00 39.64 3.07
529 530 3.381908 AGCGAAATAGGAGTCGAAGTCAT 59.618 43.478 0.00 0.00 39.64 3.06
530 531 2.753452 AGCGAAATAGGAGTCGAAGTCA 59.247 45.455 0.00 0.00 39.64 3.41
531 532 3.109619 CAGCGAAATAGGAGTCGAAGTC 58.890 50.000 0.00 0.00 39.64 3.01
532 533 2.753452 TCAGCGAAATAGGAGTCGAAGT 59.247 45.455 0.00 0.00 39.64 3.01
533 534 3.109619 GTCAGCGAAATAGGAGTCGAAG 58.890 50.000 0.00 0.00 39.64 3.79
534 535 2.159282 GGTCAGCGAAATAGGAGTCGAA 60.159 50.000 0.00 0.00 39.64 3.71
535 536 1.404391 GGTCAGCGAAATAGGAGTCGA 59.596 52.381 0.00 0.00 39.64 4.20
536 537 1.405821 AGGTCAGCGAAATAGGAGTCG 59.594 52.381 0.00 0.00 40.24 4.18
537 538 2.427453 TGAGGTCAGCGAAATAGGAGTC 59.573 50.000 0.00 0.00 0.00 3.36
538 539 2.166664 GTGAGGTCAGCGAAATAGGAGT 59.833 50.000 0.00 0.00 0.00 3.85
539 540 2.482142 GGTGAGGTCAGCGAAATAGGAG 60.482 54.545 0.00 0.00 34.50 3.69
540 541 1.480954 GGTGAGGTCAGCGAAATAGGA 59.519 52.381 0.00 0.00 34.50 2.94
541 542 1.207089 TGGTGAGGTCAGCGAAATAGG 59.793 52.381 4.80 0.00 46.53 2.57
542 543 2.672961 TGGTGAGGTCAGCGAAATAG 57.327 50.000 4.80 0.00 46.53 1.73
543 544 2.419990 CCATGGTGAGGTCAGCGAAATA 60.420 50.000 2.57 0.00 46.53 1.40
544 545 1.679944 CCATGGTGAGGTCAGCGAAAT 60.680 52.381 2.57 0.00 46.53 2.17
545 546 0.321564 CCATGGTGAGGTCAGCGAAA 60.322 55.000 2.57 0.00 46.53 3.46
546 547 1.296392 CCATGGTGAGGTCAGCGAA 59.704 57.895 2.57 0.00 46.53 4.70
547 548 2.981302 CCATGGTGAGGTCAGCGA 59.019 61.111 2.57 0.00 46.53 4.93
548 549 2.809861 AAGCCATGGTGAGGTCAGCG 62.810 60.000 14.67 0.00 46.53 5.18
549 550 0.253044 TAAGCCATGGTGAGGTCAGC 59.747 55.000 14.67 2.12 44.06 4.26
550 551 1.556911 AGTAAGCCATGGTGAGGTCAG 59.443 52.381 14.67 0.00 0.00 3.51
551 552 1.656587 AGTAAGCCATGGTGAGGTCA 58.343 50.000 14.67 0.00 0.00 4.02
552 553 3.733337 CATAGTAAGCCATGGTGAGGTC 58.267 50.000 14.67 0.00 0.00 3.85
553 554 2.158755 GCATAGTAAGCCATGGTGAGGT 60.159 50.000 14.67 0.00 0.00 3.85
554 555 2.105477 AGCATAGTAAGCCATGGTGAGG 59.895 50.000 14.67 0.00 31.95 3.86
555 556 3.482156 AGCATAGTAAGCCATGGTGAG 57.518 47.619 14.67 0.00 31.95 3.51
557 558 2.224606 CCAGCATAGTAAGCCATGGTG 58.775 52.381 14.67 2.49 45.68 4.17
558 559 1.846439 ACCAGCATAGTAAGCCATGGT 59.154 47.619 14.67 5.68 36.19 3.55
559 560 2.224606 CACCAGCATAGTAAGCCATGG 58.775 52.381 7.63 7.63 34.51 3.66
560 561 1.605710 GCACCAGCATAGTAAGCCATG 59.394 52.381 0.00 0.00 41.58 3.66
561 562 1.477558 GGCACCAGCATAGTAAGCCAT 60.478 52.381 0.00 0.00 44.61 4.40
562 563 0.107214 GGCACCAGCATAGTAAGCCA 60.107 55.000 0.00 0.00 44.61 4.75
563 564 0.107214 TGGCACCAGCATAGTAAGCC 60.107 55.000 0.00 0.00 44.61 4.35
564 565 1.017387 GTGGCACCAGCATAGTAAGC 58.983 55.000 6.29 0.00 44.61 3.09
565 566 1.134818 TCGTGGCACCAGCATAGTAAG 60.135 52.381 12.86 0.00 44.61 2.34
566 567 0.899019 TCGTGGCACCAGCATAGTAA 59.101 50.000 12.86 0.00 44.61 2.24
567 568 0.899019 TTCGTGGCACCAGCATAGTA 59.101 50.000 12.86 0.00 44.61 1.82
568 569 0.391661 CTTCGTGGCACCAGCATAGT 60.392 55.000 12.86 0.00 44.61 2.12
569 570 0.108186 TCTTCGTGGCACCAGCATAG 60.108 55.000 12.86 0.00 44.61 2.23
570 571 0.323302 TTCTTCGTGGCACCAGCATA 59.677 50.000 12.86 0.00 44.61 3.14
571 572 1.073025 TTCTTCGTGGCACCAGCAT 59.927 52.632 12.86 0.00 44.61 3.79
572 573 1.891919 GTTCTTCGTGGCACCAGCA 60.892 57.895 12.86 0.00 44.61 4.41
573 574 2.617274 GGTTCTTCGTGGCACCAGC 61.617 63.158 12.86 0.00 41.10 4.85
574 575 1.966451 GGGTTCTTCGTGGCACCAG 60.966 63.158 12.86 8.59 0.00 4.00
575 576 1.990160 AAGGGTTCTTCGTGGCACCA 61.990 55.000 12.86 0.00 0.00 4.17
576 577 0.822121 AAAGGGTTCTTCGTGGCACC 60.822 55.000 12.86 0.00 31.82 5.01
577 578 1.029681 AAAAGGGTTCTTCGTGGCAC 58.970 50.000 7.79 7.79 31.82 5.01
578 579 1.770294 AAAAAGGGTTCTTCGTGGCA 58.230 45.000 0.00 0.00 31.82 4.92
596 597 2.819608 CTCGCCTCCCATTTGAGAAAAA 59.180 45.455 0.00 0.00 34.11 1.94
597 598 2.039746 TCTCGCCTCCCATTTGAGAAAA 59.960 45.455 0.00 0.00 33.07 2.29
598 599 1.628340 TCTCGCCTCCCATTTGAGAAA 59.372 47.619 0.00 0.00 33.07 2.52
599 600 1.275666 TCTCGCCTCCCATTTGAGAA 58.724 50.000 0.00 0.00 33.07 2.87
600 601 1.500474 ATCTCGCCTCCCATTTGAGA 58.500 50.000 0.00 0.00 39.75 3.27
601 602 2.338577 AATCTCGCCTCCCATTTGAG 57.661 50.000 0.00 0.00 0.00 3.02
602 603 2.239654 AGAAATCTCGCCTCCCATTTGA 59.760 45.455 0.00 0.00 0.00 2.69
603 604 2.648059 AGAAATCTCGCCTCCCATTTG 58.352 47.619 0.00 0.00 0.00 2.32
604 605 3.372440 AAGAAATCTCGCCTCCCATTT 57.628 42.857 0.00 0.00 0.00 2.32
605 606 3.282885 GAAAGAAATCTCGCCTCCCATT 58.717 45.455 0.00 0.00 0.00 3.16
606 607 2.422093 GGAAAGAAATCTCGCCTCCCAT 60.422 50.000 0.00 0.00 0.00 4.00
607 608 1.065418 GGAAAGAAATCTCGCCTCCCA 60.065 52.381 0.00 0.00 0.00 4.37
608 609 1.669604 GGAAAGAAATCTCGCCTCCC 58.330 55.000 0.00 0.00 0.00 4.30
609 610 1.210722 AGGGAAAGAAATCTCGCCTCC 59.789 52.381 0.00 0.00 0.00 4.30
610 611 2.700722 AGGGAAAGAAATCTCGCCTC 57.299 50.000 0.00 0.00 0.00 4.70
611 612 4.779993 AATAGGGAAAGAAATCTCGCCT 57.220 40.909 0.00 0.00 0.00 5.52
612 613 6.568653 GCATAAATAGGGAAAGAAATCTCGCC 60.569 42.308 0.00 0.00 0.00 5.54
613 614 6.374578 GCATAAATAGGGAAAGAAATCTCGC 58.625 40.000 0.00 0.00 0.00 5.03
614 615 6.486657 TGGCATAAATAGGGAAAGAAATCTCG 59.513 38.462 0.00 0.00 0.00 4.04
615 616 7.520614 CGTGGCATAAATAGGGAAAGAAATCTC 60.521 40.741 0.00 0.00 0.00 2.75
616 617 6.263168 CGTGGCATAAATAGGGAAAGAAATCT 59.737 38.462 0.00 0.00 0.00 2.40
617 618 6.262273 TCGTGGCATAAATAGGGAAAGAAATC 59.738 38.462 0.00 0.00 0.00 2.17
618 619 6.126409 TCGTGGCATAAATAGGGAAAGAAAT 58.874 36.000 0.00 0.00 0.00 2.17
619 620 5.502079 TCGTGGCATAAATAGGGAAAGAAA 58.498 37.500 0.00 0.00 0.00 2.52
620 621 5.105567 TCGTGGCATAAATAGGGAAAGAA 57.894 39.130 0.00 0.00 0.00 2.52
621 622 4.764050 TCGTGGCATAAATAGGGAAAGA 57.236 40.909 0.00 0.00 0.00 2.52
622 623 6.348540 GCTATTCGTGGCATAAATAGGGAAAG 60.349 42.308 22.60 8.65 34.82 2.62
623 624 5.472137 GCTATTCGTGGCATAAATAGGGAAA 59.528 40.000 22.60 0.79 34.82 3.13
624 625 5.001232 GCTATTCGTGGCATAAATAGGGAA 58.999 41.667 22.60 6.75 34.82 3.97
625 626 4.041075 TGCTATTCGTGGCATAAATAGGGA 59.959 41.667 22.60 10.21 34.82 4.20
626 627 4.154195 GTGCTATTCGTGGCATAAATAGGG 59.846 45.833 22.60 8.96 40.66 3.53
627 628 4.143115 CGTGCTATTCGTGGCATAAATAGG 60.143 45.833 22.60 10.53 40.66 2.57
628 629 4.684242 TCGTGCTATTCGTGGCATAAATAG 59.316 41.667 19.52 19.52 40.66 1.73
629 630 4.446385 GTCGTGCTATTCGTGGCATAAATA 59.554 41.667 0.00 0.00 40.66 1.40
630 631 3.247648 GTCGTGCTATTCGTGGCATAAAT 59.752 43.478 0.00 0.00 40.66 1.40
631 632 2.605818 GTCGTGCTATTCGTGGCATAAA 59.394 45.455 0.00 0.00 40.66 1.40
632 633 2.198406 GTCGTGCTATTCGTGGCATAA 58.802 47.619 0.00 0.00 40.66 1.90
633 634 1.537348 GGTCGTGCTATTCGTGGCATA 60.537 52.381 0.00 0.00 40.66 3.14
634 635 0.810031 GGTCGTGCTATTCGTGGCAT 60.810 55.000 0.00 0.00 40.66 4.40
635 636 1.447140 GGTCGTGCTATTCGTGGCA 60.447 57.895 0.00 0.00 36.01 4.92
636 637 2.171725 GGGTCGTGCTATTCGTGGC 61.172 63.158 0.00 0.00 0.00 5.01
637 638 1.520787 GGGGTCGTGCTATTCGTGG 60.521 63.158 0.00 0.00 0.00 4.94
638 639 0.806102 CAGGGGTCGTGCTATTCGTG 60.806 60.000 0.00 0.00 0.00 4.35
639 640 1.255667 ACAGGGGTCGTGCTATTCGT 61.256 55.000 0.00 0.00 0.00 3.85
640 641 0.806102 CACAGGGGTCGTGCTATTCG 60.806 60.000 0.00 0.00 0.00 3.34
641 642 3.065575 CACAGGGGTCGTGCTATTC 57.934 57.895 0.00 0.00 0.00 1.75
647 648 2.034879 GTGATGCACAGGGGTCGTG 61.035 63.158 0.00 0.00 37.43 4.35
648 649 2.217038 AGTGATGCACAGGGGTCGT 61.217 57.895 0.00 0.00 36.74 4.34
649 650 1.742880 CAGTGATGCACAGGGGTCG 60.743 63.158 0.00 0.00 36.74 4.79
650 651 2.042831 GCAGTGATGCACAGGGGTC 61.043 63.158 0.00 0.00 36.74 4.46
651 652 2.034687 GCAGTGATGCACAGGGGT 59.965 61.111 0.00 0.00 36.74 4.95
652 653 2.753043 GGCAGTGATGCACAGGGG 60.753 66.667 2.29 0.00 36.74 4.79
653 654 1.303888 AAGGCAGTGATGCACAGGG 60.304 57.895 2.29 0.00 36.74 4.45
654 655 0.892358 ACAAGGCAGTGATGCACAGG 60.892 55.000 2.29 0.00 36.74 4.00
655 656 0.240145 CACAAGGCAGTGATGCACAG 59.760 55.000 4.31 0.00 42.05 3.66
656 657 1.174078 CCACAAGGCAGTGATGCACA 61.174 55.000 11.09 0.00 42.05 4.57
657 658 1.582968 CCACAAGGCAGTGATGCAC 59.417 57.895 11.09 0.00 42.05 4.57
658 659 4.084265 CCACAAGGCAGTGATGCA 57.916 55.556 11.09 0.00 42.05 3.96
668 669 2.680370 GGGAGTAGGGGCCACAAGG 61.680 68.421 8.31 0.00 38.23 3.61
669 670 0.326238 TAGGGAGTAGGGGCCACAAG 60.326 60.000 8.31 0.00 0.00 3.16
670 671 0.326238 CTAGGGAGTAGGGGCCACAA 60.326 60.000 8.31 0.00 0.00 3.33
671 672 1.226104 TCTAGGGAGTAGGGGCCACA 61.226 60.000 8.31 0.00 0.00 4.17
672 673 0.031414 TTCTAGGGAGTAGGGGCCAC 60.031 60.000 4.39 0.00 0.00 5.01
673 674 0.949582 ATTCTAGGGAGTAGGGGCCA 59.050 55.000 4.39 0.00 0.00 5.36
674 675 2.382649 TCTATTCTAGGGAGTAGGGGCC 59.617 54.545 0.00 0.00 34.05 5.80
675 676 3.076333 AGTCTATTCTAGGGAGTAGGGGC 59.924 52.174 0.00 0.00 34.05 5.80
676 677 5.791664 TCTAGTCTATTCTAGGGAGTAGGGG 59.208 48.000 0.00 0.00 38.25 4.79
677 678 6.502863 ACTCTAGTCTATTCTAGGGAGTAGGG 59.497 46.154 7.49 12.06 39.99 3.53
678 679 7.563724 ACTCTAGTCTATTCTAGGGAGTAGG 57.436 44.000 7.49 0.00 39.99 3.18
679 680 9.537852 TCTACTCTAGTCTATTCTAGGGAGTAG 57.462 40.741 16.74 16.74 41.12 2.57
680 681 9.895507 TTCTACTCTAGTCTATTCTAGGGAGTA 57.104 37.037 7.49 0.00 39.99 2.59
681 682 8.802057 TTCTACTCTAGTCTATTCTAGGGAGT 57.198 38.462 7.49 0.00 39.99 3.85
682 683 9.886132 GATTCTACTCTAGTCTATTCTAGGGAG 57.114 40.741 7.49 0.00 39.99 4.30
683 684 8.828751 GGATTCTACTCTAGTCTATTCTAGGGA 58.171 40.741 7.49 0.00 39.99 4.20
684 685 8.050930 GGGATTCTACTCTAGTCTATTCTAGGG 58.949 44.444 0.00 0.00 42.40 3.53
685 686 8.832735 AGGGATTCTACTCTAGTCTATTCTAGG 58.167 40.741 0.00 0.00 38.25 3.02
686 687 9.886132 GAGGGATTCTACTCTAGTCTATTCTAG 57.114 40.741 0.00 0.00 38.83 2.43
687 688 8.828751 GGAGGGATTCTACTCTAGTCTATTCTA 58.171 40.741 8.21 0.00 34.22 2.10
688 689 7.257272 GGGAGGGATTCTACTCTAGTCTATTCT 60.257 44.444 8.21 0.00 34.22 2.40
689 690 6.888088 GGGAGGGATTCTACTCTAGTCTATTC 59.112 46.154 8.21 0.00 34.22 1.75
690 691 6.568823 AGGGAGGGATTCTACTCTAGTCTATT 59.431 42.308 8.21 0.00 34.22 1.73
691 692 6.102616 AGGGAGGGATTCTACTCTAGTCTAT 58.897 44.000 8.21 0.00 34.22 1.98
692 693 5.488215 AGGGAGGGATTCTACTCTAGTCTA 58.512 45.833 8.21 0.00 34.22 2.59
693 694 4.321282 AGGGAGGGATTCTACTCTAGTCT 58.679 47.826 8.21 0.00 34.22 3.24
694 695 4.105057 TGAGGGAGGGATTCTACTCTAGTC 59.895 50.000 8.21 4.88 33.69 2.59
695 696 4.055820 TGAGGGAGGGATTCTACTCTAGT 58.944 47.826 8.21 0.00 33.69 2.57
768 769 2.119611 TTCTGGGACGCTGGAGGA 59.880 61.111 0.00 0.00 0.00 3.71
771 772 3.319198 GGGTTCTGGGACGCTGGA 61.319 66.667 0.00 0.00 0.00 3.86
809 810 1.806247 CGAGGTGTGTGTGCTTTCTGA 60.806 52.381 0.00 0.00 0.00 3.27
813 814 2.534019 CGCGAGGTGTGTGTGCTTT 61.534 57.895 0.00 0.00 0.00 3.51
833 834 1.683790 CGCGGACATCTGAACCGTTC 61.684 60.000 17.47 4.18 46.95 3.95
840 841 0.753848 TATGGACCGCGGACATCTGA 60.754 55.000 35.90 17.02 0.00 3.27
871 879 1.746991 GACTGGCAGGGCAGTTAGC 60.747 63.158 26.29 12.56 44.65 3.09
874 882 0.995024 ATTAGACTGGCAGGGCAGTT 59.005 50.000 26.29 18.43 0.00 3.16
928 939 0.399833 GGAGATGAGAATGGGGAGGC 59.600 60.000 0.00 0.00 0.00 4.70
989 1012 1.819632 CCGGCCATCTTTTCTCCCG 60.820 63.158 2.24 0.00 35.74 5.14
1077 1111 4.767255 GCGGAGAGGTGGTGCAGG 62.767 72.222 0.00 0.00 0.00 4.85
1170 1210 2.176273 AGCCTGCATGCGAATCGAC 61.176 57.895 14.09 0.00 36.02 4.20
1179 1219 2.743752 CGAACGACCAGCCTGCATG 61.744 63.158 0.00 0.00 0.00 4.06
1190 1230 5.674215 AATCAAACAAACAAACGAACGAC 57.326 34.783 0.14 0.00 0.00 4.34
1359 1413 2.390599 CGGGAGCATCACCACGTTG 61.391 63.158 0.00 0.00 32.04 4.10
1433 1497 5.803020 AGAAAGATGCATTCTTCGGTTAC 57.197 39.130 0.00 0.00 44.09 2.50
1523 1587 3.935828 GGAGAGAAAGAATCGGGTGAAAG 59.064 47.826 0.00 0.00 0.00 2.62
1525 1589 2.903784 TGGAGAGAAAGAATCGGGTGAA 59.096 45.455 0.00 0.00 0.00 3.18
1528 1592 1.208293 GCTGGAGAGAAAGAATCGGGT 59.792 52.381 0.00 0.00 0.00 5.28
1539 1603 0.897621 TCAAATGCTCGCTGGAGAGA 59.102 50.000 5.57 0.00 43.27 3.10
1575 1639 7.887381 TCAAAAACAACCAAGAAACAGAGTTA 58.113 30.769 0.00 0.00 0.00 2.24
1645 1735 4.475369 GTCGCGTAGACTCGATCG 57.525 61.111 9.36 9.36 46.13 3.69
1696 1786 1.303074 CTTGGCCTGCAGCTCTTCA 60.303 57.895 8.66 0.00 43.05 3.02
1827 1917 3.762407 TCGTCAGTTTCAATCAGGGAA 57.238 42.857 0.00 0.00 0.00 3.97
1912 2011 2.766263 ACTCATCACGCTTTGGGAGATA 59.234 45.455 0.00 0.00 33.60 1.98
2163 3531 7.975616 AGATATTTGTGTAAAATGCACATCCAC 59.024 33.333 2.19 0.00 44.91 4.02
2179 3547 5.490139 ACGCCATTCTTCAGATATTTGTG 57.510 39.130 0.00 0.00 0.00 3.33
2186 3554 2.787473 TGGAACGCCATTCTTCAGAT 57.213 45.000 0.00 0.00 39.92 2.90
2217 3586 9.512588 AGAAAGCTTCAAGATTTTCTAGAATCA 57.487 29.630 5.89 0.00 37.92 2.57
2245 3614 1.608055 CATCAGCAGACCACCAAACA 58.392 50.000 0.00 0.00 0.00 2.83
2256 3625 5.048013 ACATTCATGATAATGGCATCAGCAG 60.048 40.000 11.22 0.00 44.61 4.24
2354 3733 5.260424 AGGACCAATGCATAATGTGTACAA 58.740 37.500 0.00 0.00 0.00 2.41
2359 3738 3.949754 ACAGAGGACCAATGCATAATGTG 59.050 43.478 0.00 0.00 0.00 3.21
2416 3810 6.451393 TCATTTGTAAATAAAACTGCGGCTT 58.549 32.000 0.00 0.00 0.00 4.35
2515 3915 2.224018 TGTCGTAGGGGTGTTGTTGTAC 60.224 50.000 0.00 0.00 0.00 2.90
2526 3926 5.291905 AGAATAAAGGATTGTCGTAGGGG 57.708 43.478 0.00 0.00 0.00 4.79
2560 3964 6.096846 AGGGAACATGTATTTGTAAGGATTGC 59.903 38.462 0.00 0.00 0.00 3.56
2565 3969 7.461182 TCAAAGGGAACATGTATTTGTAAGG 57.539 36.000 17.86 0.39 33.61 2.69
2587 3991 0.901827 TACAATCGCAAGGAGGCTCA 59.098 50.000 17.69 0.00 38.47 4.26
2599 4003 9.438291 GAATTGTTTCCTATTCATGTACAATCG 57.562 33.333 0.00 0.00 34.65 3.34
2643 4049 5.532406 AGGCTGCATTTCATAATATGTTCGT 59.468 36.000 0.50 0.00 0.00 3.85
2644 4050 6.005583 AGGCTGCATTTCATAATATGTTCG 57.994 37.500 0.50 0.00 0.00 3.95
2680 4086 3.199508 AGACATAACAGAGGCTGCATTCT 59.800 43.478 0.50 0.61 34.37 2.40
2726 4141 4.434520 GTTAGACATAACAGAGGCTCCAC 58.565 47.826 11.71 0.00 40.90 4.02
2775 4190 3.999046 TGCATCATGTACATAGCAGAGG 58.001 45.455 19.73 11.70 0.00 3.69
2821 4236 8.574737 ACCCTCATCAGTCGTTACTTATAATAC 58.425 37.037 0.00 0.00 31.97 1.89
3005 4440 6.869388 GGAAACAGAGTTAAGTTGAGGTAGAG 59.131 42.308 0.00 0.00 0.00 2.43
3032 4467 3.058708 CACATCACAACTAACTGCAGTGG 60.059 47.826 22.49 18.36 0.00 4.00
3154 6108 4.141390 GGGAGGGAAAGATAAGCAGAATCA 60.141 45.833 0.00 0.00 0.00 2.57
3178 6326 9.712305 GTACACAGTTCAAATGCCTATATATCT 57.288 33.333 0.00 0.00 0.00 1.98
3223 6371 4.162690 GCCGCCCAGAGGTACAGG 62.163 72.222 0.00 0.00 34.57 4.00
3282 6511 9.878599 CAAATGTAGAAACGATTTAGTTGAACT 57.121 29.630 2.37 2.37 34.14 3.01
3340 6570 7.280652 ACAAACTAGTAACCTAACGCTTTTCAA 59.719 33.333 0.00 0.00 0.00 2.69
3341 6571 6.762661 ACAAACTAGTAACCTAACGCTTTTCA 59.237 34.615 0.00 0.00 0.00 2.69
3416 6909 7.033791 GGAACTAGATGAAATACGAGTGTTGA 58.966 38.462 0.00 0.00 0.00 3.18
3437 6933 7.173032 TGGAAAGAAATAGGAAAGTAGGGAAC 58.827 38.462 0.00 0.00 0.00 3.62
3729 7226 2.229792 TGGACATCACAAGAAGTTGGC 58.770 47.619 0.00 0.00 38.07 4.52
3815 7312 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
3816 7313 3.574780 GCTTTTTCGGACGGAGGG 58.425 61.111 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.