Multiple sequence alignment - TraesCS7D01G057300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G057300 chr7D 100.000 3413 0 0 1 3413 30762253 30758841 0.000000e+00 6303.0
1 TraesCS7D01G057300 chr7D 87.361 1440 152 12 1001 2425 1999994 1998570 0.000000e+00 1624.0
2 TraesCS7D01G057300 chr7D 79.466 1422 230 41 1015 2387 625615353 625616761 0.000000e+00 952.0
3 TraesCS7D01G057300 chr7D 80.472 635 107 12 1671 2292 1996744 1996114 1.430000e-128 470.0
4 TraesCS7D01G057300 chr4A 94.864 1616 74 6 852 2459 697969900 697971514 0.000000e+00 2516.0
5 TraesCS7D01G057300 chr4A 88.404 1466 144 12 1003 2446 675526373 675524912 0.000000e+00 1742.0
6 TraesCS7D01G057300 chr4A 88.593 1429 151 7 1006 2425 742586534 742585109 0.000000e+00 1725.0
7 TraesCS7D01G057300 chr4A 85.714 833 66 26 2469 3286 697972658 697973452 0.000000e+00 830.0
8 TraesCS7D01G057300 chr4A 87.175 616 61 12 1 608 697963444 697964049 0.000000e+00 684.0
9 TraesCS7D01G057300 chr7A 88.418 1416 136 15 999 2387 63060454 63059040 0.000000e+00 1681.0
10 TraesCS7D01G057300 chr7A 87.002 1431 171 12 976 2398 1690770 1692193 0.000000e+00 1598.0
11 TraesCS7D01G057300 chr7B 78.145 1423 250 35 1019 2390 682374160 682372748 0.000000e+00 848.0
12 TraesCS7D01G057300 chr7B 90.083 121 12 0 2616 2736 662723530 662723410 1.270000e-34 158.0
13 TraesCS7D01G057300 chr7B 90.083 121 12 0 2616 2736 663102298 663102418 1.270000e-34 158.0
14 TraesCS7D01G057300 chr3B 76.157 1405 271 41 1001 2370 136450344 136448969 0.000000e+00 680.0
15 TraesCS7D01G057300 chr3D 75.887 1410 266 45 1001 2370 86342892 86341517 0.000000e+00 652.0
16 TraesCS7D01G057300 chr3D 90.909 121 11 0 2616 2736 48687573 48687693 2.730000e-36 163.0
17 TraesCS7D01G057300 chr3A 75.747 1406 275 37 1001 2370 102624904 102623529 0.000000e+00 647.0
18 TraesCS7D01G057300 chr3A 90.083 121 12 0 2616 2736 66008006 66008126 1.270000e-34 158.0
19 TraesCS7D01G057300 chr6D 76.375 491 92 20 115 598 394186203 394186676 3.400000e-60 243.0
20 TraesCS7D01G057300 chr6D 90.083 121 12 0 2616 2736 389249500 389249380 1.270000e-34 158.0
21 TraesCS7D01G057300 chr6B 75.056 445 83 20 178 614 590012405 590012829 7.520000e-42 182.0
22 TraesCS7D01G057300 chr6B 100.000 28 0 0 199 226 262358141 262358168 6.000000e-03 52.8
23 TraesCS7D01G057300 chr2A 73.868 486 103 19 125 599 50967311 50966839 4.530000e-39 172.0
24 TraesCS7D01G057300 chr2A 80.203 197 35 4 383 575 8317041 8316845 9.870000e-31 145.0
25 TraesCS7D01G057300 chr2A 77.401 177 20 8 115 289 699412561 699412403 1.690000e-13 87.9
26 TraesCS7D01G057300 chrUn 90.083 121 12 0 2616 2736 216508992 216509112 1.270000e-34 158.0
27 TraesCS7D01G057300 chrUn 90.083 121 12 0 2616 2736 453113813 453113693 1.270000e-34 158.0
28 TraesCS7D01G057300 chr1D 90.083 121 12 0 2616 2736 51917131 51917251 1.270000e-34 158.0
29 TraesCS7D01G057300 chr5B 81.152 191 32 3 122 311 545821449 545821262 2.120000e-32 150.0
30 TraesCS7D01G057300 chr5B 88.333 60 7 0 384 443 514291121 514291062 4.720000e-09 73.1
31 TraesCS7D01G057300 chr1B 77.974 227 47 3 124 348 363087679 363087904 4.590000e-29 139.0
32 TraesCS7D01G057300 chr5A 91.667 60 5 0 384 443 539104768 539104709 2.180000e-12 84.2
33 TraesCS7D01G057300 chr5A 100.000 29 0 0 130 158 329239100 329239128 2.000000e-03 54.7
34 TraesCS7D01G057300 chr1A 80.220 91 18 0 115 205 504254437 504254527 6.110000e-08 69.4
35 TraesCS7D01G057300 chr5D 90.196 51 5 0 384 434 425088946 425088896 2.200000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G057300 chr7D 30758841 30762253 3412 True 6303 6303 100.0000 1 3413 1 chr7D.!!$R1 3412
1 TraesCS7D01G057300 chr7D 1996114 1999994 3880 True 1047 1624 83.9165 1001 2425 2 chr7D.!!$R2 1424
2 TraesCS7D01G057300 chr7D 625615353 625616761 1408 False 952 952 79.4660 1015 2387 1 chr7D.!!$F1 1372
3 TraesCS7D01G057300 chr4A 675524912 675526373 1461 True 1742 1742 88.4040 1003 2446 1 chr4A.!!$R1 1443
4 TraesCS7D01G057300 chr4A 742585109 742586534 1425 True 1725 1725 88.5930 1006 2425 1 chr4A.!!$R2 1419
5 TraesCS7D01G057300 chr4A 697969900 697973452 3552 False 1673 2516 90.2890 852 3286 2 chr4A.!!$F2 2434
6 TraesCS7D01G057300 chr4A 697963444 697964049 605 False 684 684 87.1750 1 608 1 chr4A.!!$F1 607
7 TraesCS7D01G057300 chr7A 63059040 63060454 1414 True 1681 1681 88.4180 999 2387 1 chr7A.!!$R1 1388
8 TraesCS7D01G057300 chr7A 1690770 1692193 1423 False 1598 1598 87.0020 976 2398 1 chr7A.!!$F1 1422
9 TraesCS7D01G057300 chr7B 682372748 682374160 1412 True 848 848 78.1450 1019 2390 1 chr7B.!!$R2 1371
10 TraesCS7D01G057300 chr3B 136448969 136450344 1375 True 680 680 76.1570 1001 2370 1 chr3B.!!$R1 1369
11 TraesCS7D01G057300 chr3D 86341517 86342892 1375 True 652 652 75.8870 1001 2370 1 chr3D.!!$R1 1369
12 TraesCS7D01G057300 chr3A 102623529 102624904 1375 True 647 647 75.7470 1001 2370 1 chr3A.!!$R1 1369

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
645 654 0.027716 CATGTCCGTAGACGAGTCCG 59.972 60.0 3.07 0.0 46.74 4.79 F
840 849 0.036010 AGTCCAGTGTGGTATGCTGC 60.036 55.0 0.00 0.0 39.03 5.25 F
1971 2055 0.038526 AGGAGTACTTCGGCAACACG 60.039 55.0 0.00 0.0 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1530 1600 0.179234 TGACAAAGTCCCAGAACGCA 59.821 50.000 0.0 0.0 0.00 5.24 R
2146 2248 1.141019 CAATCATCGTCCCCGTCGT 59.859 57.895 0.0 0.0 35.01 4.34 R
3037 5417 0.397535 TATTCCCCGGTTCGGCTACT 60.398 55.000 0.0 0.0 46.86 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.716628 TGAACTTTCATTCTTTCAGTAGGCAT 59.283 34.615 0.00 0.00 31.01 4.40
50 51 7.231317 TGAACTTTCATTCTTTCAGTAGGCATT 59.769 33.333 0.00 0.00 31.01 3.56
55 56 7.849804 TCATTCTTTCAGTAGGCATTAGTTC 57.150 36.000 0.00 0.00 0.00 3.01
66 67 7.173735 CAGTAGGCATTAGTTCATTGATGCATA 59.826 37.037 0.00 5.72 44.99 3.14
82 83 7.933728 TGATGCATATGTTGTAATGAATTGC 57.066 32.000 0.00 0.00 0.00 3.56
92 93 4.636249 TGTAATGAATTGCCAAAACCACC 58.364 39.130 0.00 0.00 0.00 4.61
93 94 2.453983 ATGAATTGCCAAAACCACCG 57.546 45.000 0.00 0.00 0.00 4.94
95 96 1.281566 GAATTGCCAAAACCACCGCG 61.282 55.000 0.00 0.00 0.00 6.46
96 97 1.739338 AATTGCCAAAACCACCGCGA 61.739 50.000 8.23 0.00 0.00 5.87
109 111 1.196808 CACCGCGAAATTAGTTGCACT 59.803 47.619 8.23 0.00 0.00 4.40
117 119 5.458779 GCGAAATTAGTTGCACTTTCAAAGT 59.541 36.000 0.00 0.00 44.06 2.66
130 132 1.960417 TCAAAGTGCCATGACGTGAA 58.040 45.000 0.00 0.00 0.00 3.18
133 135 0.396435 AAGTGCCATGACGTGAAGGA 59.604 50.000 0.00 0.00 0.00 3.36
158 160 6.010850 GGAAAAGAAGGTGGAGAGGTTTAAT 58.989 40.000 0.00 0.00 0.00 1.40
164 166 7.569240 AGAAGGTGGAGAGGTTTAATATCTTG 58.431 38.462 0.00 0.00 0.00 3.02
169 171 6.205658 GTGGAGAGGTTTAATATCTTGATGGC 59.794 42.308 0.00 0.00 0.00 4.40
188 190 0.041135 CGGCGGTCGAGAAGTAGATC 60.041 60.000 0.00 0.00 42.43 2.75
208 210 9.598517 GTAGATCAACATCAAAGAGAAGAAGAT 57.401 33.333 0.00 0.00 0.00 2.40
215 217 6.941436 ACATCAAAGAGAAGAAGATCAAGCTT 59.059 34.615 0.00 0.00 0.00 3.74
240 242 1.301677 GAGGAAGGTTGAGCTTGCGG 61.302 60.000 8.45 0.00 0.00 5.69
241 243 2.335712 GGAAGGTTGAGCTTGCGGG 61.336 63.158 0.00 0.00 0.00 6.13
246 248 3.353836 TTGAGCTTGCGGGCGTTC 61.354 61.111 0.00 0.00 37.29 3.95
247 249 4.617520 TGAGCTTGCGGGCGTTCA 62.618 61.111 0.00 0.00 37.29 3.18
248 250 3.793144 GAGCTTGCGGGCGTTCAG 61.793 66.667 0.00 0.00 37.29 3.02
249 251 4.314440 AGCTTGCGGGCGTTCAGA 62.314 61.111 0.00 0.00 37.29 3.27
259 262 1.141053 GGGCGTTCAGAGGATACCAAT 59.859 52.381 0.00 0.00 37.17 3.16
272 275 5.634118 AGGATACCAATATGTTGACCATGG 58.366 41.667 11.19 11.19 37.53 3.66
280 283 1.307878 TGTTGACCATGGGGATGGAT 58.692 50.000 18.09 0.00 44.39 3.41
289 292 3.395607 CCATGGGGATGGATGAGTTAGAA 59.604 47.826 2.85 0.00 44.39 2.10
297 300 5.642919 GGATGGATGAGTTAGAAGATGATGC 59.357 44.000 0.00 0.00 0.00 3.91
300 303 4.451774 GGATGAGTTAGAAGATGATGCTGC 59.548 45.833 0.00 0.00 0.00 5.25
324 327 1.565156 ATCGTGTGCGCAATCGTTGT 61.565 50.000 26.23 15.50 38.14 3.32
340 343 2.902484 CGTTGTTAGAATGTTGAAGCGC 59.098 45.455 0.00 0.00 0.00 5.92
345 348 0.171903 AGAATGTTGAAGCGCATGGC 59.828 50.000 11.47 0.00 44.05 4.40
377 380 3.839432 CGCGGGAGAGGAGGGAAC 61.839 72.222 0.00 0.00 0.00 3.62
379 382 1.990614 GCGGGAGAGGAGGGAACTT 60.991 63.158 0.00 0.00 44.43 2.66
380 383 1.901085 CGGGAGAGGAGGGAACTTG 59.099 63.158 0.00 0.00 44.43 3.16
381 384 0.905337 CGGGAGAGGAGGGAACTTGT 60.905 60.000 0.00 0.00 44.43 3.16
382 385 0.615850 GGGAGAGGAGGGAACTTGTG 59.384 60.000 0.00 0.00 44.43 3.33
383 386 1.645710 GGAGAGGAGGGAACTTGTGA 58.354 55.000 0.00 0.00 44.43 3.58
388 391 1.132689 AGGAGGGAACTTGTGAGGAGT 60.133 52.381 0.00 0.00 44.43 3.85
389 392 1.276705 GGAGGGAACTTGTGAGGAGTC 59.723 57.143 0.00 0.00 44.43 3.36
410 413 2.493973 GGCAGAGTGAGCGAGGAG 59.506 66.667 0.00 0.00 0.00 3.69
420 423 3.760035 GCGAGGAGGCTCGGACAA 61.760 66.667 8.69 0.00 45.88 3.18
438 441 3.646715 CCGACCTGGGAGGGCAAA 61.647 66.667 0.00 0.00 46.60 3.68
439 442 2.434331 CGACCTGGGAGGGCAAAA 59.566 61.111 0.00 0.00 46.60 2.44
440 443 1.228429 CGACCTGGGAGGGCAAAAA 60.228 57.895 0.00 0.00 46.60 1.94
442 445 0.897621 GACCTGGGAGGGCAAAAATG 59.102 55.000 0.00 0.00 45.15 2.32
443 446 0.190815 ACCTGGGAGGGCAAAAATGT 59.809 50.000 0.00 0.00 40.58 2.71
526 535 2.238521 ACCGCCTCATTTTGTTGTGAT 58.761 42.857 0.00 0.00 0.00 3.06
527 536 2.030007 ACCGCCTCATTTTGTTGTGATG 60.030 45.455 0.00 0.00 0.00 3.07
540 549 1.746615 GTGATGGTGCGCTGTGGAT 60.747 57.895 9.73 0.00 0.00 3.41
552 561 4.178540 GCGCTGTGGATACTACACTTTAA 58.821 43.478 0.00 0.00 39.52 1.52
553 562 4.809426 GCGCTGTGGATACTACACTTTAAT 59.191 41.667 0.00 0.00 39.52 1.40
591 600 5.542616 TGCATTTAAAATGAAATTGGCCG 57.457 34.783 0.00 0.00 36.10 6.13
592 601 4.394300 TGCATTTAAAATGAAATTGGCCGG 59.606 37.500 0.00 0.00 36.10 6.13
593 602 4.633565 GCATTTAAAATGAAATTGGCCGGA 59.366 37.500 5.05 0.00 36.10 5.14
600 609 2.781431 GAAATTGGCCGGACCTGGGT 62.781 60.000 3.83 0.00 40.22 4.51
608 617 1.378762 CGGACCTGGGTGGACATTT 59.621 57.895 0.00 0.00 39.71 2.32
609 618 0.960364 CGGACCTGGGTGGACATTTG 60.960 60.000 0.00 0.00 39.71 2.32
610 619 0.611896 GGACCTGGGTGGACATTTGG 60.612 60.000 0.00 0.00 39.71 3.28
611 620 0.611896 GACCTGGGTGGACATTTGGG 60.612 60.000 0.00 0.00 39.71 4.12
612 621 1.305213 CCTGGGTGGACATTTGGGG 60.305 63.158 0.00 0.00 38.35 4.96
613 622 1.773635 CTGGGTGGACATTTGGGGA 59.226 57.895 0.00 0.00 0.00 4.81
614 623 0.323725 CTGGGTGGACATTTGGGGAG 60.324 60.000 0.00 0.00 0.00 4.30
615 624 1.000359 GGGTGGACATTTGGGGAGG 60.000 63.158 0.00 0.00 0.00 4.30
616 625 1.682344 GGTGGACATTTGGGGAGGC 60.682 63.158 0.00 0.00 0.00 4.70
617 626 1.384191 GTGGACATTTGGGGAGGCT 59.616 57.895 0.00 0.00 0.00 4.58
618 627 0.251787 GTGGACATTTGGGGAGGCTT 60.252 55.000 0.00 0.00 0.00 4.35
619 628 0.039618 TGGACATTTGGGGAGGCTTC 59.960 55.000 0.00 0.00 0.00 3.86
620 629 0.684479 GGACATTTGGGGAGGCTTCC 60.684 60.000 6.25 6.25 43.23 3.46
621 630 0.039618 GACATTTGGGGAGGCTTCCA 59.960 55.000 17.76 10.30 45.98 3.53
622 631 0.712380 ACATTTGGGGAGGCTTCCAT 59.288 50.000 17.76 0.00 45.98 3.41
623 632 1.342374 ACATTTGGGGAGGCTTCCATC 60.342 52.381 17.76 8.74 45.98 3.51
624 633 1.063417 CATTTGGGGAGGCTTCCATCT 60.063 52.381 17.76 1.08 45.98 2.90
625 634 0.625849 TTTGGGGAGGCTTCCATCTC 59.374 55.000 17.76 3.70 45.98 2.75
626 635 1.281925 TTGGGGAGGCTTCCATCTCC 61.282 60.000 17.76 9.01 45.98 3.71
629 638 3.721793 GGAGGCTTCCATCTCCATG 57.278 57.895 10.56 0.00 46.54 3.66
630 639 0.842635 GGAGGCTTCCATCTCCATGT 59.157 55.000 10.56 0.00 46.54 3.21
631 640 1.202746 GGAGGCTTCCATCTCCATGTC 60.203 57.143 10.56 0.00 46.54 3.06
632 641 0.842635 AGGCTTCCATCTCCATGTCC 59.157 55.000 0.00 0.00 0.00 4.02
633 642 0.533755 GGCTTCCATCTCCATGTCCG 60.534 60.000 0.00 0.00 0.00 4.79
634 643 0.179000 GCTTCCATCTCCATGTCCGT 59.821 55.000 0.00 0.00 0.00 4.69
635 644 1.412710 GCTTCCATCTCCATGTCCGTA 59.587 52.381 0.00 0.00 0.00 4.02
636 645 2.546795 GCTTCCATCTCCATGTCCGTAG 60.547 54.545 0.00 0.00 0.00 3.51
637 646 2.748209 TCCATCTCCATGTCCGTAGA 57.252 50.000 0.00 0.00 0.00 2.59
638 647 2.307768 TCCATCTCCATGTCCGTAGAC 58.692 52.381 0.00 0.00 43.83 2.59
639 648 1.001268 CCATCTCCATGTCCGTAGACG 60.001 57.143 0.00 0.00 46.74 4.18
640 649 1.947456 CATCTCCATGTCCGTAGACGA 59.053 52.381 3.07 0.00 46.74 4.20
641 650 1.664873 TCTCCATGTCCGTAGACGAG 58.335 55.000 3.07 0.00 46.74 4.18
642 651 1.065636 TCTCCATGTCCGTAGACGAGT 60.066 52.381 3.07 0.00 46.74 4.18
643 652 1.331138 CTCCATGTCCGTAGACGAGTC 59.669 57.143 3.07 0.00 46.74 3.36
644 653 0.381089 CCATGTCCGTAGACGAGTCC 59.619 60.000 3.07 0.00 46.74 3.85
645 654 0.027716 CATGTCCGTAGACGAGTCCG 59.972 60.000 3.07 0.00 46.74 4.79
646 655 1.094073 ATGTCCGTAGACGAGTCCGG 61.094 60.000 12.58 12.58 46.74 5.14
647 656 1.448540 GTCCGTAGACGAGTCCGGA 60.449 63.158 15.97 15.97 46.44 5.14
648 657 1.448540 TCCGTAGACGAGTCCGGAC 60.449 63.158 27.67 27.67 43.99 4.79
649 658 2.467826 CCGTAGACGAGTCCGGACC 61.468 68.421 30.82 20.28 43.01 4.46
650 659 1.449246 CGTAGACGAGTCCGGACCT 60.449 63.158 30.82 21.74 43.02 3.85
651 660 1.703438 CGTAGACGAGTCCGGACCTG 61.703 65.000 30.82 24.41 43.02 4.00
652 661 0.676151 GTAGACGAGTCCGGACCTGT 60.676 60.000 30.82 27.43 40.78 4.00
653 662 0.392193 TAGACGAGTCCGGACCTGTC 60.392 60.000 33.53 33.53 40.78 3.51
654 663 2.675772 ACGAGTCCGGACCTGTCC 60.676 66.667 30.82 13.69 46.18 4.02
664 673 2.491675 GGACCTGTCCTCGGAAAAAT 57.508 50.000 9.11 0.00 46.16 1.82
665 674 3.622166 GGACCTGTCCTCGGAAAAATA 57.378 47.619 9.11 0.00 46.16 1.40
666 675 4.152284 GGACCTGTCCTCGGAAAAATAT 57.848 45.455 9.11 0.00 46.16 1.28
667 676 4.524053 GGACCTGTCCTCGGAAAAATATT 58.476 43.478 9.11 0.00 46.16 1.28
668 677 4.335594 GGACCTGTCCTCGGAAAAATATTG 59.664 45.833 9.11 0.00 46.16 1.90
669 678 5.174037 ACCTGTCCTCGGAAAAATATTGA 57.826 39.130 0.00 0.00 0.00 2.57
670 679 5.566469 ACCTGTCCTCGGAAAAATATTGAA 58.434 37.500 0.00 0.00 0.00 2.69
671 680 5.648092 ACCTGTCCTCGGAAAAATATTGAAG 59.352 40.000 0.00 0.00 0.00 3.02
672 681 5.066505 CCTGTCCTCGGAAAAATATTGAAGG 59.933 44.000 0.00 0.00 0.00 3.46
673 682 4.398044 TGTCCTCGGAAAAATATTGAAGGC 59.602 41.667 0.00 0.00 0.00 4.35
674 683 4.398044 GTCCTCGGAAAAATATTGAAGGCA 59.602 41.667 0.00 0.00 0.00 4.75
675 684 4.640201 TCCTCGGAAAAATATTGAAGGCAG 59.360 41.667 0.00 0.00 0.00 4.85
676 685 4.354587 CTCGGAAAAATATTGAAGGCAGC 58.645 43.478 0.00 0.00 0.00 5.25
677 686 3.108144 CGGAAAAATATTGAAGGCAGCG 58.892 45.455 0.00 0.00 0.00 5.18
678 687 3.427503 CGGAAAAATATTGAAGGCAGCGT 60.428 43.478 0.00 0.00 0.00 5.07
679 688 4.494484 GGAAAAATATTGAAGGCAGCGTT 58.506 39.130 0.00 0.00 0.00 4.84
680 689 4.327087 GGAAAAATATTGAAGGCAGCGTTG 59.673 41.667 4.74 0.00 0.00 4.10
681 690 3.508744 AAATATTGAAGGCAGCGTTGG 57.491 42.857 4.74 0.00 0.00 3.77
682 691 1.392589 ATATTGAAGGCAGCGTTGGG 58.607 50.000 4.74 0.00 0.00 4.12
683 692 0.679640 TATTGAAGGCAGCGTTGGGG 60.680 55.000 4.74 0.00 0.00 4.96
684 693 2.424842 ATTGAAGGCAGCGTTGGGGA 62.425 55.000 4.74 0.00 0.00 4.81
685 694 2.044946 GAAGGCAGCGTTGGGGAT 60.045 61.111 4.74 0.00 0.00 3.85
686 695 2.361610 AAGGCAGCGTTGGGGATG 60.362 61.111 0.16 0.00 0.00 3.51
687 696 3.210012 AAGGCAGCGTTGGGGATGT 62.210 57.895 0.16 0.00 0.00 3.06
688 697 3.134127 GGCAGCGTTGGGGATGTC 61.134 66.667 0.16 0.00 0.00 3.06
689 698 3.134127 GCAGCGTTGGGGATGTCC 61.134 66.667 0.16 0.00 0.00 4.02
690 699 2.671070 CAGCGTTGGGGATGTCCT 59.329 61.111 0.00 0.00 35.95 3.85
691 700 1.904771 CAGCGTTGGGGATGTCCTA 59.095 57.895 0.00 0.00 35.95 2.94
692 701 0.251916 CAGCGTTGGGGATGTCCTAA 59.748 55.000 0.00 0.00 35.95 2.69
693 702 0.988832 AGCGTTGGGGATGTCCTAAA 59.011 50.000 0.00 0.00 37.76 1.85
694 703 1.092348 GCGTTGGGGATGTCCTAAAC 58.908 55.000 0.00 3.71 37.76 2.01
695 704 1.612199 GCGTTGGGGATGTCCTAAACA 60.612 52.381 13.77 0.00 43.51 2.83
696 705 2.081462 CGTTGGGGATGTCCTAAACAC 58.919 52.381 13.77 0.00 41.75 3.32
697 706 2.443416 GTTGGGGATGTCCTAAACACC 58.557 52.381 0.00 0.00 41.75 4.16
698 707 1.748732 TGGGGATGTCCTAAACACCA 58.251 50.000 0.00 0.00 41.75 4.17
699 708 2.283834 TGGGGATGTCCTAAACACCAT 58.716 47.619 0.00 0.00 41.75 3.55
700 709 3.465832 TGGGGATGTCCTAAACACCATA 58.534 45.455 0.00 0.00 41.75 2.74
701 710 3.458118 TGGGGATGTCCTAAACACCATAG 59.542 47.826 0.00 0.00 41.75 2.23
702 711 3.477530 GGGATGTCCTAAACACCATAGC 58.522 50.000 0.00 0.00 41.75 2.97
703 712 3.118038 GGGATGTCCTAAACACCATAGCA 60.118 47.826 0.00 0.00 41.75 3.49
704 713 3.877508 GGATGTCCTAAACACCATAGCAC 59.122 47.826 0.00 0.00 41.75 4.40
705 714 2.967362 TGTCCTAAACACCATAGCACG 58.033 47.619 0.00 0.00 31.20 5.34
706 715 2.563620 TGTCCTAAACACCATAGCACGA 59.436 45.455 0.00 0.00 31.20 4.35
707 716 3.196901 TGTCCTAAACACCATAGCACGAT 59.803 43.478 0.00 0.00 31.20 3.73
708 717 3.555956 GTCCTAAACACCATAGCACGATG 59.444 47.826 0.00 0.00 0.00 3.84
709 718 3.196901 TCCTAAACACCATAGCACGATGT 59.803 43.478 0.00 0.00 0.00 3.06
710 719 3.938963 CCTAAACACCATAGCACGATGTT 59.061 43.478 0.00 0.00 35.05 2.71
711 720 3.829886 AAACACCATAGCACGATGTTG 57.170 42.857 0.00 0.00 33.88 3.33
712 721 1.086696 ACACCATAGCACGATGTTGC 58.913 50.000 0.00 0.00 43.34 4.17
713 722 0.378257 CACCATAGCACGATGTTGCC 59.622 55.000 0.00 0.00 44.14 4.52
714 723 0.748005 ACCATAGCACGATGTTGCCC 60.748 55.000 0.00 0.00 44.14 5.36
715 724 0.464373 CCATAGCACGATGTTGCCCT 60.464 55.000 0.00 0.00 44.14 5.19
716 725 0.659427 CATAGCACGATGTTGCCCTG 59.341 55.000 0.00 0.00 44.14 4.45
717 726 0.253044 ATAGCACGATGTTGCCCTGT 59.747 50.000 0.00 0.00 44.14 4.00
718 727 0.391130 TAGCACGATGTTGCCCTGTC 60.391 55.000 0.00 0.00 44.14 3.51
719 728 1.965930 GCACGATGTTGCCCTGTCA 60.966 57.895 0.00 0.00 36.42 3.58
720 729 1.308069 GCACGATGTTGCCCTGTCAT 61.308 55.000 0.00 0.00 36.42 3.06
721 730 2.011548 GCACGATGTTGCCCTGTCATA 61.012 52.381 0.00 0.00 36.42 2.15
722 731 2.564771 CACGATGTTGCCCTGTCATAT 58.435 47.619 0.00 0.00 0.00 1.78
723 732 2.288729 CACGATGTTGCCCTGTCATATG 59.711 50.000 0.00 0.00 0.00 1.78
724 733 2.170397 ACGATGTTGCCCTGTCATATGA 59.830 45.455 0.00 0.00 0.00 2.15
725 734 3.181451 ACGATGTTGCCCTGTCATATGAT 60.181 43.478 9.02 0.00 0.00 2.45
726 735 3.187842 CGATGTTGCCCTGTCATATGATG 59.812 47.826 9.02 5.28 0.00 3.07
727 736 2.300433 TGTTGCCCTGTCATATGATGC 58.700 47.619 9.02 10.06 0.00 3.91
728 737 2.300433 GTTGCCCTGTCATATGATGCA 58.700 47.619 9.02 12.40 0.00 3.96
729 738 2.689471 GTTGCCCTGTCATATGATGCAA 59.311 45.455 21.08 21.08 35.13 4.08
730 739 2.300433 TGCCCTGTCATATGATGCAAC 58.700 47.619 9.02 0.00 0.00 4.17
731 740 1.265095 GCCCTGTCATATGATGCAACG 59.735 52.381 9.02 0.00 0.00 4.10
732 741 1.265095 CCCTGTCATATGATGCAACGC 59.735 52.381 9.02 0.00 0.00 4.84
733 742 1.941975 CCTGTCATATGATGCAACGCA 59.058 47.619 9.02 0.00 44.86 5.24
744 753 3.908189 CAACGCATGCAGGATCCA 58.092 55.556 19.57 0.00 0.00 3.41
745 754 2.411535 CAACGCATGCAGGATCCAT 58.588 52.632 19.57 0.00 0.00 3.41
746 755 0.742505 CAACGCATGCAGGATCCATT 59.257 50.000 19.57 0.00 0.00 3.16
747 756 1.027357 AACGCATGCAGGATCCATTC 58.973 50.000 19.57 2.62 0.00 2.67
748 757 0.820891 ACGCATGCAGGATCCATTCC 60.821 55.000 19.57 0.00 45.85 3.01
752 761 3.741860 GCAGGATCCATTCCAGCG 58.258 61.111 15.82 0.00 45.74 5.18
753 762 2.550101 GCAGGATCCATTCCAGCGC 61.550 63.158 15.82 0.00 45.74 5.92
755 764 2.974698 GGATCCATTCCAGCGCCG 60.975 66.667 6.95 0.00 44.74 6.46
756 765 2.203070 GATCCATTCCAGCGCCGT 60.203 61.111 2.29 0.00 0.00 5.68
757 766 2.514592 ATCCATTCCAGCGCCGTG 60.515 61.111 2.29 0.00 0.00 4.94
758 767 4.776322 TCCATTCCAGCGCCGTGG 62.776 66.667 9.35 9.35 39.19 4.94
759 768 4.776322 CCATTCCAGCGCCGTGGA 62.776 66.667 13.98 13.98 45.37 4.02
760 769 3.499737 CATTCCAGCGCCGTGGAC 61.500 66.667 17.28 0.00 46.75 4.02
764 773 4.728102 CCAGCGCCGTGGACGTAA 62.728 66.667 10.05 0.00 40.44 3.18
765 774 2.735478 CAGCGCCGTGGACGTAAA 60.735 61.111 2.29 0.00 37.74 2.01
766 775 2.029369 AGCGCCGTGGACGTAAAA 59.971 55.556 2.29 0.00 37.74 1.52
767 776 1.375013 AGCGCCGTGGACGTAAAAT 60.375 52.632 2.29 0.00 37.74 1.82
768 777 0.108709 AGCGCCGTGGACGTAAAATA 60.109 50.000 2.29 0.00 37.74 1.40
769 778 0.932399 GCGCCGTGGACGTAAAATAT 59.068 50.000 0.00 0.00 37.74 1.28
770 779 1.071041 GCGCCGTGGACGTAAAATATC 60.071 52.381 0.00 0.00 37.74 1.63
771 780 1.523934 CGCCGTGGACGTAAAATATCC 59.476 52.381 0.00 0.00 37.74 2.59
772 781 2.800629 CGCCGTGGACGTAAAATATCCT 60.801 50.000 0.00 0.00 37.74 3.24
773 782 2.798847 GCCGTGGACGTAAAATATCCTC 59.201 50.000 0.00 0.00 37.74 3.71
774 783 3.387397 CCGTGGACGTAAAATATCCTCC 58.613 50.000 0.00 0.00 37.74 4.30
775 784 3.047796 CGTGGACGTAAAATATCCTCCG 58.952 50.000 0.00 0.00 33.34 4.63
776 785 3.243168 CGTGGACGTAAAATATCCTCCGA 60.243 47.826 0.00 0.00 32.67 4.55
777 786 4.047142 GTGGACGTAAAATATCCTCCGAC 58.953 47.826 0.00 0.00 33.34 4.79
778 787 3.243168 TGGACGTAAAATATCCTCCGACG 60.243 47.826 0.00 0.00 33.34 5.12
779 788 2.723143 GACGTAAAATATCCTCCGACGC 59.277 50.000 0.00 0.00 32.28 5.19
780 789 2.056577 CGTAAAATATCCTCCGACGCC 58.943 52.381 0.00 0.00 0.00 5.68
781 790 2.544277 CGTAAAATATCCTCCGACGCCA 60.544 50.000 0.00 0.00 0.00 5.69
782 791 1.949465 AAAATATCCTCCGACGCCAC 58.051 50.000 0.00 0.00 0.00 5.01
783 792 0.828022 AAATATCCTCCGACGCCACA 59.172 50.000 0.00 0.00 0.00 4.17
784 793 0.389391 AATATCCTCCGACGCCACAG 59.611 55.000 0.00 0.00 0.00 3.66
785 794 2.088674 ATATCCTCCGACGCCACAGC 62.089 60.000 0.00 0.00 0.00 4.40
821 830 5.263968 GCAAGTGCTACTAGAGTATTCCA 57.736 43.478 0.00 0.00 38.21 3.53
822 831 5.285651 GCAAGTGCTACTAGAGTATTCCAG 58.714 45.833 0.00 0.00 38.21 3.86
823 832 5.163499 GCAAGTGCTACTAGAGTATTCCAGT 60.163 44.000 0.00 0.00 38.21 4.00
824 833 6.500041 CAAGTGCTACTAGAGTATTCCAGTC 58.500 44.000 0.00 0.00 0.00 3.51
825 834 5.134661 AGTGCTACTAGAGTATTCCAGTCC 58.865 45.833 0.00 0.00 0.00 3.85
826 835 4.888239 GTGCTACTAGAGTATTCCAGTCCA 59.112 45.833 0.00 0.00 0.00 4.02
827 836 5.009210 GTGCTACTAGAGTATTCCAGTCCAG 59.991 48.000 0.00 0.00 0.00 3.86
828 837 5.134661 GCTACTAGAGTATTCCAGTCCAGT 58.865 45.833 0.00 0.00 33.69 4.00
829 838 5.009210 GCTACTAGAGTATTCCAGTCCAGTG 59.991 48.000 0.00 0.00 31.84 3.66
830 839 4.936802 ACTAGAGTATTCCAGTCCAGTGT 58.063 43.478 0.00 0.00 28.66 3.55
831 840 4.707448 ACTAGAGTATTCCAGTCCAGTGTG 59.293 45.833 0.00 0.00 28.66 3.82
832 841 2.834549 AGAGTATTCCAGTCCAGTGTGG 59.165 50.000 0.00 0.00 39.43 4.17
833 842 2.567615 GAGTATTCCAGTCCAGTGTGGT 59.432 50.000 0.00 0.00 39.03 4.16
834 843 3.767673 GAGTATTCCAGTCCAGTGTGGTA 59.232 47.826 0.00 0.00 39.03 3.25
835 844 4.362677 AGTATTCCAGTCCAGTGTGGTAT 58.637 43.478 0.00 0.00 39.03 2.73
836 845 3.634397 ATTCCAGTCCAGTGTGGTATG 57.366 47.619 0.00 0.00 39.03 2.39
837 846 0.613260 TCCAGTCCAGTGTGGTATGC 59.387 55.000 0.00 0.00 39.03 3.14
838 847 0.615331 CCAGTCCAGTGTGGTATGCT 59.385 55.000 0.00 0.00 39.03 3.79
839 848 1.676916 CCAGTCCAGTGTGGTATGCTG 60.677 57.143 0.00 0.00 39.03 4.41
840 849 0.036010 AGTCCAGTGTGGTATGCTGC 60.036 55.000 0.00 0.00 39.03 5.25
841 850 0.321564 GTCCAGTGTGGTATGCTGCA 60.322 55.000 4.13 4.13 39.03 4.41
842 851 0.620030 TCCAGTGTGGTATGCTGCAT 59.380 50.000 20.18 20.18 39.03 3.96
843 852 0.736636 CCAGTGTGGTATGCTGCATG 59.263 55.000 24.59 7.00 31.35 4.06
844 853 0.099968 CAGTGTGGTATGCTGCATGC 59.900 55.000 24.59 22.48 43.25 4.06
845 854 1.063006 GTGTGGTATGCTGCATGCG 59.937 57.895 24.59 9.16 46.63 4.73
846 855 2.025156 GTGGTATGCTGCATGCGC 59.975 61.111 24.59 22.12 46.63 6.09
847 856 2.124612 TGGTATGCTGCATGCGCT 60.125 55.556 24.59 17.70 46.63 5.92
848 857 2.330393 GGTATGCTGCATGCGCTG 59.670 61.111 24.59 15.66 46.63 5.18
849 858 2.330393 GTATGCTGCATGCGCTGG 59.670 61.111 24.59 13.51 46.63 4.85
850 859 2.124612 TATGCTGCATGCGCTGGT 60.125 55.556 24.59 17.89 46.63 4.00
916 925 1.347707 TGATCGAGCATTATCCACCCC 59.652 52.381 0.00 0.00 0.00 4.95
927 936 5.817816 GCATTATCCACCCCTATAAATCTCG 59.182 44.000 0.00 0.00 0.00 4.04
932 941 1.132495 ACCCCTATAAATCTCGGCCCT 60.132 52.381 0.00 0.00 0.00 5.19
949 958 5.713861 TCGGCCCTAATTAGGAGTAGTAATC 59.286 44.000 29.75 8.86 46.63 1.75
1034 1053 2.812542 ATAGTGCGCGTGCTGTCGAA 62.813 55.000 23.16 0.00 43.34 3.71
1095 1114 3.699894 CTCACCTGCTGGGACGCT 61.700 66.667 14.82 0.00 38.76 5.07
1107 1126 2.125391 GACGCTGCCATGCTCTCA 60.125 61.111 0.00 0.00 0.00 3.27
1221 1270 1.749634 CTTCTCCACTACTACCCCGTG 59.250 57.143 0.00 0.00 0.00 4.94
1410 1469 2.747855 CTGGCGCAGTTCTTCCCC 60.748 66.667 10.83 0.00 0.00 4.81
1416 1475 1.376037 GCAGTTCTTCCCCCTCACG 60.376 63.158 0.00 0.00 0.00 4.35
1907 1991 4.070552 GAAGGAGACCGCGTGCCT 62.071 66.667 4.92 2.64 0.00 4.75
1971 2055 0.038526 AGGAGTACTTCGGCAACACG 60.039 55.000 0.00 0.00 0.00 4.49
2146 2248 1.080772 ACGCATCGCTTCTTCGACA 60.081 52.632 0.00 0.00 41.62 4.35
2366 2468 4.796231 CGACGAGTTCTGGGCCGG 62.796 72.222 5.83 5.83 0.00 6.13
2428 2545 5.183969 AGGCTTGAATCATCATCCATATCG 58.816 41.667 0.00 0.00 34.96 2.92
2446 2563 1.153469 GCCACTCTGCTCTGCTACC 60.153 63.158 0.00 0.00 0.00 3.18
2448 2565 1.769026 CCACTCTGCTCTGCTACCTA 58.231 55.000 0.00 0.00 0.00 3.08
2459 2576 7.495934 TCTGCTCTGCTACCTATCAATTTTTAC 59.504 37.037 0.00 0.00 0.00 2.01
2460 2577 6.542370 TGCTCTGCTACCTATCAATTTTTACC 59.458 38.462 0.00 0.00 0.00 2.85
2462 2579 7.254932 GCTCTGCTACCTATCAATTTTTACCTG 60.255 40.741 0.00 0.00 0.00 4.00
2464 2581 8.494433 TCTGCTACCTATCAATTTTTACCTGAT 58.506 33.333 0.00 0.00 34.29 2.90
2546 4912 9.933240 ATGAGATATCCCTCAAAGAAGAAATTT 57.067 29.630 0.00 0.00 45.22 1.82
2547 4913 9.759473 TGAGATATCCCTCAAAGAAGAAATTTT 57.241 29.630 0.00 0.00 39.96 1.82
2588 4954 7.883217 TGAGACTCGAGGGAACATATATTAAC 58.117 38.462 18.41 0.00 0.00 2.01
2632 4998 3.565482 GGATGTCGCACATGGTTTCATAT 59.435 43.478 6.52 0.00 39.27 1.78
2636 5002 6.691754 TGTCGCACATGGTTTCATATAATT 57.308 33.333 0.00 0.00 31.33 1.40
2638 5004 8.214721 TGTCGCACATGGTTTCATATAATTTA 57.785 30.769 0.00 0.00 31.33 1.40
2675 5041 5.801350 TCTAAATCGAGCAGGTTTTCATG 57.199 39.130 0.00 0.00 34.50 3.07
2683 5049 4.394300 CGAGCAGGTTTTCATGAAGAAGAT 59.606 41.667 8.41 0.00 37.57 2.40
2686 5052 6.008960 AGCAGGTTTTCATGAAGAAGATCTT 58.991 36.000 7.95 7.95 39.87 2.40
2706 5072 7.596248 AGATCTTGTTCAACATGTTGTATTTGC 59.404 33.333 31.99 18.67 41.16 3.68
2711 5077 5.289917 TCAACATGTTGTATTTGCTACCG 57.710 39.130 31.99 7.76 41.16 4.02
2726 5092 2.494870 GCTACCGGTAAGAGAAGAACCA 59.505 50.000 16.65 0.00 32.55 3.67
2730 5096 2.826725 CCGGTAAGAGAAGAACCAGACT 59.173 50.000 0.00 0.00 32.55 3.24
2767 5133 9.555727 TTATTAGTATAACATGGGAGCAGAAAC 57.444 33.333 0.00 0.00 0.00 2.78
2769 5135 6.006275 AGTATAACATGGGAGCAGAAACAT 57.994 37.500 0.00 0.00 0.00 2.71
2770 5136 5.824624 AGTATAACATGGGAGCAGAAACATG 59.175 40.000 0.00 0.00 44.61 3.21
2771 5137 2.885135 ACATGGGAGCAGAAACATGA 57.115 45.000 10.12 0.00 42.39 3.07
2773 5139 2.224843 ACATGGGAGCAGAAACATGACA 60.225 45.455 10.12 0.00 42.39 3.58
2817 5184 0.248289 ACTTTGCATGGCATCTTGGC 59.752 50.000 0.00 0.00 44.03 4.52
2828 5197 1.590932 CATCTTGGCCTCAATCTCCG 58.409 55.000 3.32 0.00 31.75 4.63
2842 5211 2.125773 TCTCCGTCCCTACAGACTTC 57.874 55.000 0.00 0.00 34.46 3.01
2861 5230 3.407424 TCAGTCATCTGGTGAACCAAG 57.593 47.619 3.33 0.00 46.97 3.61
2865 5234 1.002134 ATCTGGTGAACCAAGCCGG 60.002 57.895 3.33 0.00 46.97 6.13
2867 5236 4.196778 TGGTGAACCAAGCCGGCA 62.197 61.111 31.54 1.71 44.35 5.69
2869 5238 2.568090 GTGAACCAAGCCGGCATG 59.432 61.111 31.54 27.79 39.03 4.06
2870 5239 1.971167 GTGAACCAAGCCGGCATGA 60.971 57.895 32.05 10.08 39.03 3.07
2871 5240 1.001020 TGAACCAAGCCGGCATGAT 60.001 52.632 32.05 20.13 39.03 2.45
2872 5241 0.254462 TGAACCAAGCCGGCATGATA 59.746 50.000 32.05 12.42 39.03 2.15
2873 5242 1.133823 TGAACCAAGCCGGCATGATAT 60.134 47.619 32.05 17.24 39.03 1.63
2874 5243 1.267806 GAACCAAGCCGGCATGATATG 59.732 52.381 32.05 17.61 39.03 1.78
2875 5244 0.183492 ACCAAGCCGGCATGATATGT 59.817 50.000 32.05 18.28 39.03 2.29
2876 5245 1.321474 CCAAGCCGGCATGATATGTT 58.679 50.000 32.05 10.52 0.00 2.71
2877 5246 1.682854 CCAAGCCGGCATGATATGTTT 59.317 47.619 32.05 9.72 0.00 2.83
2878 5247 2.287788 CCAAGCCGGCATGATATGTTTC 60.288 50.000 32.05 0.00 0.00 2.78
2879 5248 2.346766 AGCCGGCATGATATGTTTCA 57.653 45.000 31.54 0.00 0.00 2.69
2882 5251 1.939934 CCGGCATGATATGTTTCACGT 59.060 47.619 0.00 0.00 0.00 4.49
2883 5252 3.127589 CCGGCATGATATGTTTCACGTA 58.872 45.455 0.00 0.00 0.00 3.57
2884 5253 3.558006 CCGGCATGATATGTTTCACGTAA 59.442 43.478 0.00 0.00 0.00 3.18
2937 5306 1.102154 TCAAGCCGGCATGGTAAATG 58.898 50.000 29.65 13.95 41.21 2.32
2954 5334 3.988379 AATGTGCATCAACAAACGACT 57.012 38.095 0.00 0.00 32.81 4.18
2959 5339 4.513318 TGTGCATCAACAAACGACTTGATA 59.487 37.500 8.62 0.00 35.37 2.15
2970 5350 6.421501 ACAAACGACTTGATATGTTTCACGTA 59.578 34.615 8.62 0.00 38.50 3.57
2972 5352 7.591006 AACGACTTGATATGTTTCACGTAAT 57.409 32.000 0.00 0.00 29.23 1.89
2977 5357 7.761409 ACTTGATATGTTTCACGTAATTGCAT 58.239 30.769 0.00 0.00 0.00 3.96
3012 5392 9.898152 TTTTTGATTTGACCAGGAATTAAACTT 57.102 25.926 0.00 0.00 0.00 2.66
3015 5395 7.657336 TGATTTGACCAGGAATTAAACTTCAC 58.343 34.615 0.00 0.00 0.00 3.18
3024 5404 7.216494 CAGGAATTAAACTTCACCCAAAACAT 58.784 34.615 0.00 0.00 0.00 2.71
3037 5417 3.306849 CCCAAAACATCCATGCATGTTCA 60.307 43.478 24.58 9.14 44.62 3.18
3101 5481 8.986991 ACATATAAATAAACCCAAATGCCAAGA 58.013 29.630 0.00 0.00 0.00 3.02
3106 5486 3.473923 AACCCAAATGCCAAGAAACTG 57.526 42.857 0.00 0.00 0.00 3.16
3125 5505 1.202371 TGACGTCAGTTCAGCTCGTTT 60.202 47.619 15.76 0.00 34.93 3.60
3130 5510 0.436531 CAGTTCAGCTCGTTTCTCGC 59.563 55.000 0.00 0.00 39.67 5.03
3149 5529 3.000080 GCGAACGCTGTCTTCGTGG 62.000 63.158 11.97 0.00 42.07 4.94
3177 5717 1.526917 GCTGAGCGGCCATGGTTAT 60.527 57.895 14.67 0.00 0.00 1.89
3180 5720 0.106708 TGAGCGGCCATGGTTATCTC 59.893 55.000 14.67 14.50 0.00 2.75
3214 5754 9.319143 GATTGAGAACAATGCTAAGTACAGTAT 57.681 33.333 0.00 0.00 45.30 2.12
3226 5766 7.872993 TGCTAAGTACAGTATATCAAATGGCTC 59.127 37.037 0.00 0.00 0.00 4.70
3235 5775 7.978414 CAGTATATCAAATGGCTCGTATCTGAT 59.022 37.037 0.00 0.00 0.00 2.90
3238 5778 4.769688 TCAAATGGCTCGTATCTGATGTT 58.230 39.130 0.00 0.00 0.00 2.71
3240 5780 4.679373 AATGGCTCGTATCTGATGTTCT 57.321 40.909 0.00 0.00 0.00 3.01
3243 5783 3.447229 TGGCTCGTATCTGATGTTCTGAA 59.553 43.478 0.00 0.00 0.00 3.02
3244 5784 4.047822 GGCTCGTATCTGATGTTCTGAAG 58.952 47.826 0.00 0.00 0.00 3.02
3280 5820 0.482887 GGGCCATTGGGTTATAGCCT 59.517 55.000 4.39 0.00 40.32 4.58
3286 5826 5.193679 GCCATTGGGTTATAGCCTTATAGG 58.806 45.833 4.53 3.50 36.53 2.57
3303 5843 6.544197 CCTTATAGGCTAGATCTTAGCATCGA 59.456 42.308 19.31 0.00 42.06 3.59
3304 5844 7.230510 CCTTATAGGCTAGATCTTAGCATCGAT 59.769 40.741 19.31 0.00 42.06 3.59
3305 5845 4.981806 AGGCTAGATCTTAGCATCGATC 57.018 45.455 19.31 0.00 42.06 3.69
3306 5846 4.339748 AGGCTAGATCTTAGCATCGATCA 58.660 43.478 19.31 0.00 42.06 2.92
3307 5847 4.769488 AGGCTAGATCTTAGCATCGATCAA 59.231 41.667 19.31 0.00 42.06 2.57
3308 5848 5.244851 AGGCTAGATCTTAGCATCGATCAAA 59.755 40.000 19.31 0.00 42.06 2.69
3309 5849 5.576384 GGCTAGATCTTAGCATCGATCAAAG 59.424 44.000 19.31 0.00 42.06 2.77
3310 5850 6.155827 GCTAGATCTTAGCATCGATCAAAGT 58.844 40.000 0.00 0.00 38.75 2.66
3311 5851 7.309177 GCTAGATCTTAGCATCGATCAAAGTA 58.691 38.462 0.00 0.00 38.75 2.24
3312 5852 7.484641 GCTAGATCTTAGCATCGATCAAAGTAG 59.515 40.741 0.00 0.03 38.75 2.57
3313 5853 7.517614 AGATCTTAGCATCGATCAAAGTAGA 57.482 36.000 0.00 0.00 38.75 2.59
3314 5854 8.121305 AGATCTTAGCATCGATCAAAGTAGAT 57.879 34.615 0.00 0.00 38.75 1.98
3315 5855 8.243426 AGATCTTAGCATCGATCAAAGTAGATC 58.757 37.037 16.38 16.38 38.75 2.75
3330 5870 9.788960 TCAAAGTAGATCGATGTATATATGCAC 57.211 33.333 0.54 0.38 0.00 4.57
3331 5871 9.573133 CAAAGTAGATCGATGTATATATGCACA 57.427 33.333 0.54 0.00 0.00 4.57
3337 5877 8.864087 AGATCGATGTATATATGCACATATGGT 58.136 33.333 7.77 4.98 35.55 3.55
3338 5878 9.481340 GATCGATGTATATATGCACATATGGTT 57.519 33.333 7.77 0.00 35.55 3.67
3339 5879 8.647143 TCGATGTATATATGCACATATGGTTG 57.353 34.615 7.77 0.00 35.55 3.77
3340 5880 7.224557 TCGATGTATATATGCACATATGGTTGC 59.775 37.037 7.77 9.39 35.55 4.17
3341 5881 6.660887 TGTATATATGCACATATGGTTGCG 57.339 37.500 7.77 0.00 35.71 4.85
3342 5882 6.402222 TGTATATATGCACATATGGTTGCGA 58.598 36.000 7.77 1.88 35.71 5.10
3343 5883 7.047271 TGTATATATGCACATATGGTTGCGAT 58.953 34.615 7.77 8.71 35.71 4.58
3344 5884 8.200792 TGTATATATGCACATATGGTTGCGATA 58.799 33.333 7.77 10.38 35.71 2.92
3345 5885 9.040939 GTATATATGCACATATGGTTGCGATAA 57.959 33.333 7.77 0.00 35.71 1.75
3346 5886 6.816134 ATATGCACATATGGTTGCGATAAA 57.184 33.333 7.80 0.00 33.05 1.40
3347 5887 5.710513 ATGCACATATGGTTGCGATAAAT 57.289 34.783 7.80 0.00 0.00 1.40
3348 5888 5.107109 TGCACATATGGTTGCGATAAATC 57.893 39.130 7.80 0.00 0.00 2.17
3349 5889 4.578105 TGCACATATGGTTGCGATAAATCA 59.422 37.500 7.80 0.00 0.00 2.57
3350 5890 5.241285 TGCACATATGGTTGCGATAAATCAT 59.759 36.000 7.80 0.00 35.14 2.45
3351 5891 5.570206 GCACATATGGTTGCGATAAATCATG 59.430 40.000 7.80 0.00 33.04 3.07
3352 5892 6.568271 GCACATATGGTTGCGATAAATCATGA 60.568 38.462 7.80 0.00 33.04 3.07
3353 5893 7.019418 CACATATGGTTGCGATAAATCATGAG 58.981 38.462 7.80 0.00 33.04 2.90
3354 5894 6.712095 ACATATGGTTGCGATAAATCATGAGT 59.288 34.615 7.80 0.00 33.04 3.41
3355 5895 4.880886 TGGTTGCGATAAATCATGAGTG 57.119 40.909 0.09 0.00 0.00 3.51
3356 5896 4.512484 TGGTTGCGATAAATCATGAGTGA 58.488 39.130 0.09 0.00 39.04 3.41
3357 5897 4.571984 TGGTTGCGATAAATCATGAGTGAG 59.428 41.667 0.09 0.00 37.87 3.51
3358 5898 4.521943 GTTGCGATAAATCATGAGTGAGC 58.478 43.478 0.09 3.70 37.87 4.26
3359 5899 3.795877 TGCGATAAATCATGAGTGAGCA 58.204 40.909 0.09 6.30 37.87 4.26
3360 5900 4.383173 TGCGATAAATCATGAGTGAGCAT 58.617 39.130 0.09 0.00 37.87 3.79
3361 5901 5.540911 TGCGATAAATCATGAGTGAGCATA 58.459 37.500 0.09 0.00 37.87 3.14
3362 5902 5.636543 TGCGATAAATCATGAGTGAGCATAG 59.363 40.000 0.09 0.00 37.87 2.23
3363 5903 5.636965 GCGATAAATCATGAGTGAGCATAGT 59.363 40.000 0.09 0.00 37.87 2.12
3364 5904 6.400834 GCGATAAATCATGAGTGAGCATAGTG 60.401 42.308 0.09 0.00 37.87 2.74
3365 5905 6.400834 CGATAAATCATGAGTGAGCATAGTGC 60.401 42.308 0.09 0.00 45.46 4.40
3379 5919 3.642755 GTGCTGTTCACTCCCACG 58.357 61.111 0.00 0.00 42.38 4.94
3380 5920 1.227556 GTGCTGTTCACTCCCACGT 60.228 57.895 0.00 0.00 42.38 4.49
3381 5921 1.227527 TGCTGTTCACTCCCACGTG 60.228 57.895 9.08 9.08 36.25 4.49
3382 5922 1.069090 GCTGTTCACTCCCACGTGA 59.931 57.895 19.30 0.00 41.82 4.35
3383 5923 0.320771 GCTGTTCACTCCCACGTGAT 60.321 55.000 19.30 0.00 42.91 3.06
3384 5924 1.878102 GCTGTTCACTCCCACGTGATT 60.878 52.381 19.30 0.00 42.91 2.57
3385 5925 2.069273 CTGTTCACTCCCACGTGATTC 58.931 52.381 19.30 0.00 42.91 2.52
3386 5926 1.068474 GTTCACTCCCACGTGATTCG 58.932 55.000 19.30 4.85 42.91 3.34
3401 5941 6.505039 CGTGATTCGTGCACTTAATATACA 57.495 37.500 16.19 6.45 34.18 2.29
3402 5942 6.928820 CGTGATTCGTGCACTTAATATACAA 58.071 36.000 16.19 0.00 34.18 2.41
3403 5943 6.839301 CGTGATTCGTGCACTTAATATACAAC 59.161 38.462 16.19 7.71 34.18 3.32
3404 5944 7.463515 CGTGATTCGTGCACTTAATATACAACA 60.464 37.037 16.19 5.17 34.18 3.33
3405 5945 8.172484 GTGATTCGTGCACTTAATATACAACAA 58.828 33.333 16.19 0.00 33.57 2.83
3406 5946 8.387354 TGATTCGTGCACTTAATATACAACAAG 58.613 33.333 16.19 0.00 0.00 3.16
3407 5947 6.102006 TCGTGCACTTAATATACAACAAGC 57.898 37.500 16.19 0.00 0.00 4.01
3408 5948 5.872617 TCGTGCACTTAATATACAACAAGCT 59.127 36.000 16.19 0.00 0.00 3.74
3409 5949 6.370442 TCGTGCACTTAATATACAACAAGCTT 59.630 34.615 16.19 0.00 0.00 3.74
3410 5950 6.465781 CGTGCACTTAATATACAACAAGCTTG 59.534 38.462 24.84 24.84 0.00 4.01
3411 5951 7.305474 GTGCACTTAATATACAACAAGCTTGT 58.695 34.615 26.36 26.36 44.72 3.16
3412 5952 8.447833 GTGCACTTAATATACAACAAGCTTGTA 58.552 33.333 31.31 17.32 41.31 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.481368 TCATTTAGGTATTGCGGTGAGT 57.519 40.909 0.00 0.00 0.00 3.41
41 42 5.439721 TGCATCAATGAACTAATGCCTACT 58.560 37.500 3.68 0.00 42.98 2.57
66 67 6.204495 GTGGTTTTGGCAATTCATTACAACAT 59.796 34.615 0.00 0.00 0.00 2.71
81 82 0.598942 AATTTCGCGGTGGTTTTGGC 60.599 50.000 6.13 0.00 0.00 4.52
82 83 2.030628 ACTAATTTCGCGGTGGTTTTGG 60.031 45.455 6.13 0.00 0.00 3.28
109 111 2.293170 TCACGTCATGGCACTTTGAAA 58.707 42.857 0.00 0.00 0.00 2.69
117 119 1.191489 TCCTCCTTCACGTCATGGCA 61.191 55.000 0.00 0.00 0.00 4.92
130 132 2.909662 CTCTCCACCTTCTTTTCCTCCT 59.090 50.000 0.00 0.00 0.00 3.69
133 135 2.707554 ACCTCTCCACCTTCTTTTCCT 58.292 47.619 0.00 0.00 0.00 3.36
158 160 1.069090 GACCGCCGCCATCAAGATA 59.931 57.895 0.00 0.00 0.00 1.98
164 166 4.508128 TTCTCGACCGCCGCCATC 62.508 66.667 0.00 0.00 38.37 3.51
169 171 0.041135 GATCTACTTCTCGACCGCCG 60.041 60.000 0.00 0.00 40.25 6.46
188 190 7.022384 GCTTGATCTTCTTCTCTTTGATGTTG 58.978 38.462 0.00 0.00 0.00 3.33
208 210 4.170468 ACCTTCCTCTTTTCAAGCTTGA 57.830 40.909 25.16 25.16 34.92 3.02
215 217 3.864789 AGCTCAACCTTCCTCTTTTCA 57.135 42.857 0.00 0.00 0.00 2.69
224 226 2.982744 GCCCGCAAGCTCAACCTTC 61.983 63.158 0.00 0.00 0.00 3.46
240 242 2.622064 ATTGGTATCCTCTGAACGCC 57.378 50.000 0.00 0.00 0.00 5.68
241 243 4.632153 ACATATTGGTATCCTCTGAACGC 58.368 43.478 0.00 0.00 0.00 4.84
243 245 6.483640 GGTCAACATATTGGTATCCTCTGAAC 59.516 42.308 0.00 0.00 36.39 3.18
244 246 6.157820 TGGTCAACATATTGGTATCCTCTGAA 59.842 38.462 0.00 0.00 36.39 3.02
246 248 5.928976 TGGTCAACATATTGGTATCCTCTG 58.071 41.667 0.00 0.00 36.39 3.35
247 249 6.466326 CCATGGTCAACATATTGGTATCCTCT 60.466 42.308 2.57 0.00 37.84 3.69
248 250 5.707298 CCATGGTCAACATATTGGTATCCTC 59.293 44.000 2.57 0.00 37.84 3.71
249 251 5.458069 CCCATGGTCAACATATTGGTATCCT 60.458 44.000 11.73 0.00 37.84 3.24
272 275 5.815233 TCATCTTCTAACTCATCCATCCC 57.185 43.478 0.00 0.00 0.00 3.85
280 283 3.131046 TCGCAGCATCATCTTCTAACTCA 59.869 43.478 0.00 0.00 0.00 3.41
289 292 2.991866 CACGATTATCGCAGCATCATCT 59.008 45.455 14.97 0.00 45.12 2.90
297 300 1.084037 GCGCACACGATTATCGCAG 60.084 57.895 14.97 10.06 45.12 5.18
300 303 1.715268 CGATTGCGCACACGATTATCG 60.715 52.381 24.49 22.20 46.93 2.92
324 327 2.159393 GCCATGCGCTTCAACATTCTAA 60.159 45.455 9.73 0.00 0.00 2.10
340 343 2.440796 ACCTCATTGGCCGCCATG 60.441 61.111 14.30 13.44 40.22 3.66
350 353 4.473520 CTCCCGCGCCACCTCATT 62.474 66.667 0.00 0.00 0.00 2.57
362 365 0.905337 ACAAGTTCCCTCCTCTCCCG 60.905 60.000 0.00 0.00 0.00 5.14
369 372 1.276705 GACTCCTCACAAGTTCCCTCC 59.723 57.143 0.00 0.00 0.00 4.30
372 375 0.037232 CCGACTCCTCACAAGTTCCC 60.037 60.000 0.00 0.00 0.00 3.97
374 377 1.009389 CGCCGACTCCTCACAAGTTC 61.009 60.000 0.00 0.00 0.00 3.01
375 378 1.006102 CGCCGACTCCTCACAAGTT 60.006 57.895 0.00 0.00 0.00 2.66
376 379 2.651361 CGCCGACTCCTCACAAGT 59.349 61.111 0.00 0.00 0.00 3.16
377 380 2.125912 CCGCCGACTCCTCACAAG 60.126 66.667 0.00 0.00 0.00 3.16
378 381 4.373116 GCCGCCGACTCCTCACAA 62.373 66.667 0.00 0.00 0.00 3.33
380 383 4.803426 CTGCCGCCGACTCCTCAC 62.803 72.222 0.00 0.00 0.00 3.51
382 385 4.200283 CTCTGCCGCCGACTCCTC 62.200 72.222 0.00 0.00 0.00 3.71
420 423 4.974438 TTGCCCTCCCAGGTCGGT 62.974 66.667 0.00 0.00 31.93 4.69
423 426 0.897621 CATTTTTGCCCTCCCAGGTC 59.102 55.000 0.00 0.00 31.93 3.85
425 428 1.351076 AACATTTTTGCCCTCCCAGG 58.649 50.000 0.00 0.00 34.30 4.45
451 458 0.684535 TTCGTTCTGGCAGTCCATGA 59.315 50.000 15.27 8.00 42.51 3.07
467 474 2.159240 TGGATCCGATCACAGAAGTTCG 60.159 50.000 7.39 0.00 0.00 3.95
526 535 0.174845 GTAGTATCCACAGCGCACCA 59.825 55.000 11.47 0.00 0.00 4.17
527 536 0.174845 TGTAGTATCCACAGCGCACC 59.825 55.000 11.47 0.00 0.00 5.01
584 593 4.047125 CACCCAGGTCCGGCCAAT 62.047 66.667 15.92 0.00 40.61 3.16
591 600 0.611896 CCAAATGTCCACCCAGGTCC 60.612 60.000 0.00 0.00 39.02 4.46
592 601 0.611896 CCCAAATGTCCACCCAGGTC 60.612 60.000 0.00 0.00 39.02 3.85
593 602 1.464722 CCCAAATGTCCACCCAGGT 59.535 57.895 0.00 0.00 39.02 4.00
600 609 0.039618 GAAGCCTCCCCAAATGTCCA 59.960 55.000 0.00 0.00 0.00 4.02
608 617 1.694169 GGAGATGGAAGCCTCCCCA 60.694 63.158 0.00 0.00 42.35 4.96
609 618 1.064824 ATGGAGATGGAAGCCTCCCC 61.065 60.000 0.00 0.00 46.43 4.81
610 619 0.110104 CATGGAGATGGAAGCCTCCC 59.890 60.000 0.00 0.00 46.43 4.30
611 620 0.842635 ACATGGAGATGGAAGCCTCC 59.157 55.000 0.00 0.00 46.99 4.30
612 621 1.202746 GGACATGGAGATGGAAGCCTC 60.203 57.143 0.00 0.00 33.39 4.70
613 622 0.842635 GGACATGGAGATGGAAGCCT 59.157 55.000 0.00 0.00 33.39 4.58
614 623 0.533755 CGGACATGGAGATGGAAGCC 60.534 60.000 0.00 0.00 33.39 4.35
615 624 0.179000 ACGGACATGGAGATGGAAGC 59.821 55.000 0.00 0.00 33.39 3.86
616 625 2.959030 TCTACGGACATGGAGATGGAAG 59.041 50.000 0.00 0.00 33.39 3.46
617 626 2.693591 GTCTACGGACATGGAGATGGAA 59.306 50.000 0.00 0.00 41.75 3.53
618 627 2.307768 GTCTACGGACATGGAGATGGA 58.692 52.381 0.00 0.00 41.75 3.41
619 628 1.001268 CGTCTACGGACATGGAGATGG 60.001 57.143 0.00 0.00 42.21 3.51
620 629 1.947456 TCGTCTACGGACATGGAGATG 59.053 52.381 2.24 0.00 42.21 2.90
621 630 2.222886 CTCGTCTACGGACATGGAGAT 58.777 52.381 2.24 0.00 42.21 2.75
622 631 1.065636 ACTCGTCTACGGACATGGAGA 60.066 52.381 2.24 0.00 42.21 3.71
623 632 1.331138 GACTCGTCTACGGACATGGAG 59.669 57.143 2.24 0.00 42.21 3.86
624 633 1.376543 GACTCGTCTACGGACATGGA 58.623 55.000 2.24 0.00 42.21 3.41
625 634 0.381089 GGACTCGTCTACGGACATGG 59.619 60.000 2.24 0.00 42.21 3.66
626 635 0.027716 CGGACTCGTCTACGGACATG 59.972 60.000 2.24 0.00 42.21 3.21
627 636 2.391469 CGGACTCGTCTACGGACAT 58.609 57.895 2.24 0.00 42.21 3.06
628 637 3.880591 CGGACTCGTCTACGGACA 58.119 61.111 2.24 0.00 42.21 4.02
632 641 1.449246 AGGTCCGGACTCGTCTACG 60.449 63.158 32.52 0.00 41.45 3.51
633 642 0.676151 ACAGGTCCGGACTCGTCTAC 60.676 60.000 32.52 15.06 33.95 2.59
634 643 0.392193 GACAGGTCCGGACTCGTCTA 60.392 60.000 32.14 0.84 33.10 2.59
635 644 1.674980 GACAGGTCCGGACTCGTCT 60.675 63.158 32.14 21.71 33.10 4.18
636 645 2.698763 GGACAGGTCCGGACTCGTC 61.699 68.421 31.89 31.89 40.36 4.20
637 646 2.675772 GGACAGGTCCGGACTCGT 60.676 66.667 32.52 27.64 40.36 4.18
646 655 5.183228 TCAATATTTTTCCGAGGACAGGTC 58.817 41.667 0.00 0.00 0.00 3.85
647 656 5.174037 TCAATATTTTTCCGAGGACAGGT 57.826 39.130 0.00 0.00 0.00 4.00
648 657 5.066505 CCTTCAATATTTTTCCGAGGACAGG 59.933 44.000 0.00 0.00 0.00 4.00
649 658 5.449177 GCCTTCAATATTTTTCCGAGGACAG 60.449 44.000 0.00 0.00 0.00 3.51
650 659 4.398044 GCCTTCAATATTTTTCCGAGGACA 59.602 41.667 0.00 0.00 0.00 4.02
651 660 4.398044 TGCCTTCAATATTTTTCCGAGGAC 59.602 41.667 0.00 0.00 0.00 3.85
652 661 4.594970 TGCCTTCAATATTTTTCCGAGGA 58.405 39.130 0.00 0.00 0.00 3.71
653 662 4.734695 GCTGCCTTCAATATTTTTCCGAGG 60.735 45.833 0.00 0.00 0.00 4.63
654 663 4.354587 GCTGCCTTCAATATTTTTCCGAG 58.645 43.478 0.00 0.00 0.00 4.63
655 664 3.181501 CGCTGCCTTCAATATTTTTCCGA 60.182 43.478 0.00 0.00 0.00 4.55
656 665 3.108144 CGCTGCCTTCAATATTTTTCCG 58.892 45.455 0.00 0.00 0.00 4.30
657 666 4.110036 ACGCTGCCTTCAATATTTTTCC 57.890 40.909 0.00 0.00 0.00 3.13
658 667 4.327087 CCAACGCTGCCTTCAATATTTTTC 59.673 41.667 0.00 0.00 0.00 2.29
659 668 4.244862 CCAACGCTGCCTTCAATATTTTT 58.755 39.130 0.00 0.00 0.00 1.94
660 669 3.368323 CCCAACGCTGCCTTCAATATTTT 60.368 43.478 0.00 0.00 0.00 1.82
661 670 2.166254 CCCAACGCTGCCTTCAATATTT 59.834 45.455 0.00 0.00 0.00 1.40
662 671 1.750778 CCCAACGCTGCCTTCAATATT 59.249 47.619 0.00 0.00 0.00 1.28
663 672 1.392589 CCCAACGCTGCCTTCAATAT 58.607 50.000 0.00 0.00 0.00 1.28
664 673 0.679640 CCCCAACGCTGCCTTCAATA 60.680 55.000 0.00 0.00 0.00 1.90
665 674 1.978617 CCCCAACGCTGCCTTCAAT 60.979 57.895 0.00 0.00 0.00 2.57
666 675 2.424842 ATCCCCAACGCTGCCTTCAA 62.425 55.000 0.00 0.00 0.00 2.69
667 676 2.905996 ATCCCCAACGCTGCCTTCA 61.906 57.895 0.00 0.00 0.00 3.02
668 677 2.044946 ATCCCCAACGCTGCCTTC 60.045 61.111 0.00 0.00 0.00 3.46
669 678 2.361610 CATCCCCAACGCTGCCTT 60.362 61.111 0.00 0.00 0.00 4.35
670 679 3.628646 GACATCCCCAACGCTGCCT 62.629 63.158 0.00 0.00 0.00 4.75
671 680 3.134127 GACATCCCCAACGCTGCC 61.134 66.667 0.00 0.00 0.00 4.85
672 681 2.252072 TAGGACATCCCCAACGCTGC 62.252 60.000 0.00 0.00 36.42 5.25
673 682 0.251916 TTAGGACATCCCCAACGCTG 59.748 55.000 0.00 0.00 36.42 5.18
674 683 0.988832 TTTAGGACATCCCCAACGCT 59.011 50.000 0.00 0.00 36.42 5.07
675 684 1.092348 GTTTAGGACATCCCCAACGC 58.908 55.000 0.00 0.00 36.42 4.84
676 685 2.081462 GTGTTTAGGACATCCCCAACG 58.919 52.381 0.00 0.00 41.10 4.10
677 686 2.224917 TGGTGTTTAGGACATCCCCAAC 60.225 50.000 0.00 0.00 38.68 3.77
678 687 2.066592 TGGTGTTTAGGACATCCCCAA 58.933 47.619 0.00 0.00 38.68 4.12
679 688 1.748732 TGGTGTTTAGGACATCCCCA 58.251 50.000 0.00 0.00 38.68 4.96
680 689 3.747708 GCTATGGTGTTTAGGACATCCCC 60.748 52.174 0.00 0.00 38.68 4.81
681 690 3.118038 TGCTATGGTGTTTAGGACATCCC 60.118 47.826 0.00 0.00 38.68 3.85
682 691 3.877508 GTGCTATGGTGTTTAGGACATCC 59.122 47.826 0.00 0.00 38.68 3.51
683 692 3.555956 CGTGCTATGGTGTTTAGGACATC 59.444 47.826 3.80 0.00 41.10 3.06
684 693 3.196901 TCGTGCTATGGTGTTTAGGACAT 59.803 43.478 3.80 0.00 41.10 3.06
685 694 2.563620 TCGTGCTATGGTGTTTAGGACA 59.436 45.455 3.80 0.00 37.74 4.02
686 695 3.241067 TCGTGCTATGGTGTTTAGGAC 57.759 47.619 0.00 0.00 35.41 3.85
687 696 3.196901 ACATCGTGCTATGGTGTTTAGGA 59.803 43.478 0.00 0.00 0.00 2.94
688 697 3.531538 ACATCGTGCTATGGTGTTTAGG 58.468 45.455 0.00 0.00 0.00 2.69
689 698 4.727734 GCAACATCGTGCTATGGTGTTTAG 60.728 45.833 12.00 2.60 44.78 1.85
690 699 3.126171 GCAACATCGTGCTATGGTGTTTA 59.874 43.478 12.00 0.00 44.78 2.01
691 700 2.095263 GCAACATCGTGCTATGGTGTTT 60.095 45.455 12.00 0.00 44.78 2.83
692 701 1.468520 GCAACATCGTGCTATGGTGTT 59.531 47.619 12.00 7.40 44.78 3.32
693 702 1.086696 GCAACATCGTGCTATGGTGT 58.913 50.000 12.00 2.35 44.78 4.16
694 703 0.378257 GGCAACATCGTGCTATGGTG 59.622 55.000 7.64 7.64 45.57 4.17
695 704 0.748005 GGGCAACATCGTGCTATGGT 60.748 55.000 0.00 0.00 44.31 3.55
696 705 0.464373 AGGGCAACATCGTGCTATGG 60.464 55.000 0.00 0.00 44.31 2.74
697 706 0.659427 CAGGGCAACATCGTGCTATG 59.341 55.000 0.00 0.00 44.31 2.23
698 707 0.253044 ACAGGGCAACATCGTGCTAT 59.747 50.000 0.00 0.00 44.31 2.97
699 708 0.391130 GACAGGGCAACATCGTGCTA 60.391 55.000 0.00 0.00 44.31 3.49
700 709 1.672356 GACAGGGCAACATCGTGCT 60.672 57.895 0.00 0.00 44.31 4.40
701 710 1.308069 ATGACAGGGCAACATCGTGC 61.308 55.000 0.00 0.00 44.14 5.34
702 711 2.022764 TATGACAGGGCAACATCGTG 57.977 50.000 0.00 0.00 39.74 4.35
703 712 2.170397 TCATATGACAGGGCAACATCGT 59.830 45.455 0.00 0.00 39.74 3.73
704 713 2.837498 TCATATGACAGGGCAACATCG 58.163 47.619 0.00 0.00 39.74 3.84
705 714 3.057736 GCATCATATGACAGGGCAACATC 60.058 47.826 7.78 0.00 39.74 3.06
706 715 2.889045 GCATCATATGACAGGGCAACAT 59.111 45.455 7.78 0.00 39.74 2.71
707 716 2.300433 GCATCATATGACAGGGCAACA 58.700 47.619 7.78 0.00 39.74 3.33
708 717 2.300433 TGCATCATATGACAGGGCAAC 58.700 47.619 7.78 0.00 0.00 4.17
709 718 2.689471 GTTGCATCATATGACAGGGCAA 59.311 45.455 21.99 21.99 37.43 4.52
710 719 2.300433 GTTGCATCATATGACAGGGCA 58.700 47.619 7.78 12.55 0.00 5.36
711 720 1.265095 CGTTGCATCATATGACAGGGC 59.735 52.381 7.78 10.14 0.00 5.19
712 721 1.265095 GCGTTGCATCATATGACAGGG 59.735 52.381 7.78 0.00 0.00 4.45
713 722 1.941975 TGCGTTGCATCATATGACAGG 59.058 47.619 7.78 2.05 31.71 4.00
727 736 0.742505 AATGGATCCTGCATGCGTTG 59.257 50.000 14.23 5.69 31.14 4.10
728 737 1.027357 GAATGGATCCTGCATGCGTT 58.973 50.000 14.23 0.00 34.87 4.84
729 738 0.820891 GGAATGGATCCTGCATGCGT 60.821 55.000 14.23 0.00 45.56 5.24
730 739 1.954528 GGAATGGATCCTGCATGCG 59.045 57.895 14.23 7.87 45.56 4.73
739 748 2.203070 ACGGCGCTGGAATGGATC 60.203 61.111 22.44 0.00 0.00 3.36
740 749 2.514592 CACGGCGCTGGAATGGAT 60.515 61.111 22.44 0.00 0.00 3.41
741 750 4.776322 CCACGGCGCTGGAATGGA 62.776 66.667 22.44 0.00 32.30 3.41
742 751 4.776322 TCCACGGCGCTGGAATGG 62.776 66.667 22.44 19.00 37.39 3.16
743 752 3.499737 GTCCACGGCGCTGGAATG 61.500 66.667 25.31 9.86 42.22 2.67
747 756 4.728102 TTACGTCCACGGCGCTGG 62.728 66.667 22.44 15.63 44.95 4.85
748 757 1.632046 ATTTTACGTCCACGGCGCTG 61.632 55.000 16.39 16.39 44.95 5.18
749 758 0.108709 TATTTTACGTCCACGGCGCT 60.109 50.000 6.90 0.00 44.95 5.92
750 759 0.932399 ATATTTTACGTCCACGGCGC 59.068 50.000 6.90 0.00 44.95 6.53
751 760 1.523934 GGATATTTTACGTCCACGGCG 59.476 52.381 4.80 4.80 44.95 6.46
752 761 2.798847 GAGGATATTTTACGTCCACGGC 59.201 50.000 3.81 0.00 44.95 5.68
753 762 3.387397 GGAGGATATTTTACGTCCACGG 58.613 50.000 3.81 0.00 44.95 4.94
754 763 3.047796 CGGAGGATATTTTACGTCCACG 58.952 50.000 0.00 0.00 46.33 4.94
755 764 4.047142 GTCGGAGGATATTTTACGTCCAC 58.953 47.826 0.00 0.00 39.92 4.02
756 765 3.243168 CGTCGGAGGATATTTTACGTCCA 60.243 47.826 0.00 0.00 39.92 4.02
757 766 3.303406 CGTCGGAGGATATTTTACGTCC 58.697 50.000 0.00 0.00 37.60 4.79
758 767 2.723143 GCGTCGGAGGATATTTTACGTC 59.277 50.000 1.18 0.00 0.00 4.34
759 768 2.544486 GGCGTCGGAGGATATTTTACGT 60.544 50.000 1.18 0.00 0.00 3.57
760 769 2.056577 GGCGTCGGAGGATATTTTACG 58.943 52.381 1.18 0.00 0.00 3.18
761 770 2.798847 GTGGCGTCGGAGGATATTTTAC 59.201 50.000 1.18 0.00 0.00 2.01
762 771 2.431419 TGTGGCGTCGGAGGATATTTTA 59.569 45.455 1.18 0.00 0.00 1.52
763 772 1.208535 TGTGGCGTCGGAGGATATTTT 59.791 47.619 1.18 0.00 0.00 1.82
764 773 0.828022 TGTGGCGTCGGAGGATATTT 59.172 50.000 1.18 0.00 0.00 1.40
765 774 0.389391 CTGTGGCGTCGGAGGATATT 59.611 55.000 1.18 0.00 0.00 1.28
766 775 2.041976 CTGTGGCGTCGGAGGATAT 58.958 57.895 1.18 0.00 0.00 1.63
767 776 2.782222 GCTGTGGCGTCGGAGGATA 61.782 63.158 1.18 0.00 0.00 2.59
768 777 4.148825 GCTGTGGCGTCGGAGGAT 62.149 66.667 1.18 0.00 0.00 3.24
797 806 9.027205 ACTGGAATACTCTAGTAGCACTTGCTC 62.027 44.444 7.09 0.00 40.52 4.26
798 807 7.311201 ACTGGAATACTCTAGTAGCACTTGCT 61.311 42.308 9.09 9.09 41.28 3.91
799 808 5.163499 ACTGGAATACTCTAGTAGCACTTGC 60.163 44.000 0.00 0.00 41.28 4.01
800 809 6.458232 ACTGGAATACTCTAGTAGCACTTG 57.542 41.667 0.00 0.00 41.28 3.16
801 810 5.595133 GGACTGGAATACTCTAGTAGCACTT 59.405 44.000 0.00 0.00 42.97 3.16
802 811 5.134661 GGACTGGAATACTCTAGTAGCACT 58.865 45.833 0.00 0.00 42.97 4.40
803 812 4.888239 TGGACTGGAATACTCTAGTAGCAC 59.112 45.833 0.00 0.00 42.97 4.40
804 813 5.125367 TGGACTGGAATACTCTAGTAGCA 57.875 43.478 0.00 0.00 42.97 3.49
805 814 5.009210 CACTGGACTGGAATACTCTAGTAGC 59.991 48.000 0.00 0.00 42.97 3.58
806 815 6.038825 CACACTGGACTGGAATACTCTAGTAG 59.961 46.154 0.00 0.00 42.97 2.57
807 816 5.886474 CACACTGGACTGGAATACTCTAGTA 59.114 44.000 0.00 0.00 42.97 1.82
808 817 4.707448 CACACTGGACTGGAATACTCTAGT 59.293 45.833 0.00 0.00 45.38 2.57
809 818 4.098654 CCACACTGGACTGGAATACTCTAG 59.901 50.000 0.00 0.00 40.96 2.43
810 819 4.023980 CCACACTGGACTGGAATACTCTA 58.976 47.826 0.00 0.00 40.96 2.43
811 820 2.834549 CCACACTGGACTGGAATACTCT 59.165 50.000 0.00 0.00 40.96 3.24
812 821 2.567615 ACCACACTGGACTGGAATACTC 59.432 50.000 0.00 0.00 40.96 2.59
813 822 2.621070 ACCACACTGGACTGGAATACT 58.379 47.619 0.00 0.00 40.96 2.12
814 823 4.442706 CATACCACACTGGACTGGAATAC 58.557 47.826 0.00 0.00 40.96 1.89
815 824 3.118408 GCATACCACACTGGACTGGAATA 60.118 47.826 0.00 0.00 40.96 1.75
816 825 2.356125 GCATACCACACTGGACTGGAAT 60.356 50.000 0.00 0.00 40.96 3.01
817 826 1.003118 GCATACCACACTGGACTGGAA 59.997 52.381 0.00 0.00 40.96 3.53
818 827 0.613260 GCATACCACACTGGACTGGA 59.387 55.000 0.00 0.00 40.96 3.86
819 828 0.615331 AGCATACCACACTGGACTGG 59.385 55.000 0.00 0.00 40.96 4.00
820 829 1.730501 CAGCATACCACACTGGACTG 58.269 55.000 0.00 0.00 40.96 3.51
821 830 0.036010 GCAGCATACCACACTGGACT 60.036 55.000 0.00 0.00 40.96 3.85
822 831 0.321564 TGCAGCATACCACACTGGAC 60.322 55.000 0.00 0.00 40.96 4.02
823 832 0.620030 ATGCAGCATACCACACTGGA 59.380 50.000 5.94 0.00 40.96 3.86
824 833 0.736636 CATGCAGCATACCACACTGG 59.263 55.000 7.82 0.00 45.02 4.00
825 834 0.099968 GCATGCAGCATACCACACTG 59.900 55.000 14.21 0.00 44.79 3.66
826 835 1.371337 CGCATGCAGCATACCACACT 61.371 55.000 19.57 0.00 46.13 3.55
827 836 1.063006 CGCATGCAGCATACCACAC 59.937 57.895 19.57 0.00 46.13 3.82
828 837 2.763273 GCGCATGCAGCATACCACA 61.763 57.895 23.37 0.00 46.13 4.17
829 838 2.025156 GCGCATGCAGCATACCAC 59.975 61.111 23.37 0.00 46.13 4.16
830 839 2.124612 AGCGCATGCAGCATACCA 60.125 55.556 27.63 0.00 46.13 3.25
831 840 2.330393 CAGCGCATGCAGCATACC 59.670 61.111 27.63 1.21 46.13 2.73
832 841 1.996786 AACCAGCGCATGCAGCATAC 61.997 55.000 27.63 0.56 46.13 2.39
833 842 1.717791 GAACCAGCGCATGCAGCATA 61.718 55.000 27.63 0.00 46.13 3.14
834 843 3.060020 GAACCAGCGCATGCAGCAT 62.060 57.895 27.63 0.52 46.13 3.79
835 844 3.740397 GAACCAGCGCATGCAGCA 61.740 61.111 27.63 0.00 46.13 4.41
836 845 4.824166 CGAACCAGCGCATGCAGC 62.824 66.667 19.57 20.78 46.23 5.25
837 846 4.170062 CCGAACCAGCGCATGCAG 62.170 66.667 19.57 11.69 46.23 4.41
839 848 4.465512 CACCGAACCAGCGCATGC 62.466 66.667 11.47 7.91 43.24 4.06
840 849 3.049674 ACACCGAACCAGCGCATG 61.050 61.111 11.47 4.88 0.00 4.06
841 850 3.049674 CACACCGAACCAGCGCAT 61.050 61.111 11.47 0.00 0.00 4.73
844 853 4.619227 ACCCACACCGAACCAGCG 62.619 66.667 0.00 0.00 0.00 5.18
845 854 2.978010 CACCCACACCGAACCAGC 60.978 66.667 0.00 0.00 0.00 4.85
846 855 1.891919 CACACCCACACCGAACCAG 60.892 63.158 0.00 0.00 0.00 4.00
847 856 2.190843 CACACCCACACCGAACCA 59.809 61.111 0.00 0.00 0.00 3.67
848 857 2.593436 CCACACCCACACCGAACC 60.593 66.667 0.00 0.00 0.00 3.62
849 858 3.284449 GCCACACCCACACCGAAC 61.284 66.667 0.00 0.00 0.00 3.95
850 859 3.126703 ATGCCACACCCACACCGAA 62.127 57.895 0.00 0.00 0.00 4.30
860 869 4.819783 TGGACTTCCATGCCACAC 57.180 55.556 0.00 0.00 42.01 3.82
916 925 7.124448 ACTCCTAATTAGGGCCGAGATTTATAG 59.876 40.741 27.65 16.22 43.79 1.31
927 936 6.574662 GCAGATTACTACTCCTAATTAGGGCC 60.575 46.154 27.65 0.00 43.79 5.80
932 941 8.005388 AGGACAGCAGATTACTACTCCTAATTA 58.995 37.037 0.00 0.00 0.00 1.40
949 958 2.746671 CTGCAGGCAGGACAGCAG 60.747 66.667 13.39 5.08 46.98 4.24
1095 1114 0.622136 AGTTGGATGAGAGCATGGCA 59.378 50.000 0.00 0.00 34.11 4.92
1107 1126 2.173569 GCCCTTCTGGATGTAGTTGGAT 59.826 50.000 0.00 0.00 35.39 3.41
1159 1187 2.022129 GGTGGTCGACGACTTGCAG 61.022 63.158 26.58 0.00 32.47 4.41
1416 1475 2.183555 CCGTAGTTGAGGGCGTCC 59.816 66.667 0.00 0.00 0.00 4.79
1530 1600 0.179234 TGACAAAGTCCCAGAACGCA 59.821 50.000 0.00 0.00 0.00 5.24
1907 1991 1.885388 CGGTTATTGATGGCCGCGA 60.885 57.895 8.23 0.00 37.69 5.87
2146 2248 1.141019 CAATCATCGTCCCCGTCGT 59.859 57.895 0.00 0.00 35.01 4.34
2428 2545 1.153469 GGTAGCAGAGCAGAGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
2459 2576 7.880160 TCATGGACTGGTAAATAAAATCAGG 57.120 36.000 0.00 0.00 0.00 3.86
2460 2577 8.571336 GGATCATGGACTGGTAAATAAAATCAG 58.429 37.037 0.00 0.00 0.00 2.90
2462 2579 8.697507 AGGATCATGGACTGGTAAATAAAATC 57.302 34.615 0.00 0.00 0.00 2.17
2464 2581 7.559897 GGAAGGATCATGGACTGGTAAATAAAA 59.440 37.037 0.00 0.00 0.00 1.52
2476 4393 4.019174 ACAAACATGGAAGGATCATGGAC 58.981 43.478 0.00 0.00 44.42 4.02
2547 4913 9.468532 CTCGAGTCTCATCACATATGATAAAAA 57.531 33.333 10.38 0.00 44.13 1.94
2548 4914 8.084684 CCTCGAGTCTCATCACATATGATAAAA 58.915 37.037 10.38 0.00 44.13 1.52
2549 4915 7.309438 CCCTCGAGTCTCATCACATATGATAAA 60.309 40.741 10.38 0.00 44.13 1.40
2550 4916 6.151817 CCCTCGAGTCTCATCACATATGATAA 59.848 42.308 10.38 0.00 44.13 1.75
2551 4917 5.649831 CCCTCGAGTCTCATCACATATGATA 59.350 44.000 10.38 0.00 44.13 2.15
2560 4926 2.215942 TGTTCCCTCGAGTCTCATCA 57.784 50.000 12.31 0.26 0.00 3.07
2570 4936 6.607004 AGGAGGTTAATATATGTTCCCTCG 57.393 41.667 17.37 0.00 38.29 4.63
2670 5036 7.806409 TGTTGAACAAGATCTTCTTCATGAA 57.194 32.000 22.00 8.12 33.78 2.57
2675 5041 7.420800 ACAACATGTTGAACAAGATCTTCTTC 58.579 34.615 38.30 14.56 42.93 2.87
2683 5049 6.804677 AGCAAATACAACATGTTGAACAAGA 58.195 32.000 38.30 18.83 42.93 3.02
2686 5052 6.442952 GGTAGCAAATACAACATGTTGAACA 58.557 36.000 38.30 24.40 42.93 3.18
2693 5059 5.583061 TCTTACCGGTAGCAAATACAACATG 59.417 40.000 15.20 0.00 35.96 3.21
2706 5072 4.015084 TCTGGTTCTTCTCTTACCGGTAG 58.985 47.826 15.20 5.35 39.01 3.18
2711 5077 3.119424 CCGAGTCTGGTTCTTCTCTTACC 60.119 52.174 0.00 0.00 0.00 2.85
2748 5114 5.822519 GTCATGTTTCTGCTCCCATGTTATA 59.177 40.000 0.00 0.00 36.81 0.98
2749 5115 4.641989 GTCATGTTTCTGCTCCCATGTTAT 59.358 41.667 0.00 0.00 36.81 1.89
2750 5116 4.009675 GTCATGTTTCTGCTCCCATGTTA 58.990 43.478 0.00 0.00 36.81 2.41
2751 5117 2.821969 GTCATGTTTCTGCTCCCATGTT 59.178 45.455 0.00 0.00 36.81 2.71
2752 5118 2.224843 TGTCATGTTTCTGCTCCCATGT 60.225 45.455 0.00 0.00 36.81 3.21
2767 5133 6.091437 GGCTCTCTTTCAGAAATTTGTCATG 58.909 40.000 0.00 0.00 0.00 3.07
2769 5135 4.214119 CGGCTCTCTTTCAGAAATTTGTCA 59.786 41.667 0.00 0.00 0.00 3.58
2770 5136 4.378874 CCGGCTCTCTTTCAGAAATTTGTC 60.379 45.833 0.00 0.00 0.00 3.18
2771 5137 3.503748 CCGGCTCTCTTTCAGAAATTTGT 59.496 43.478 0.00 0.00 0.00 2.83
2773 5139 2.489722 GCCGGCTCTCTTTCAGAAATTT 59.510 45.455 22.15 0.00 0.00 1.82
2792 5159 2.167075 AGATGCCATGCAAAGTTTAGCC 59.833 45.455 0.00 0.00 43.62 3.93
2817 5184 1.683917 CTGTAGGGACGGAGATTGAGG 59.316 57.143 0.00 0.00 33.27 3.86
2819 5186 2.025226 AGTCTGTAGGGACGGAGATTGA 60.025 50.000 0.00 0.00 41.78 2.57
2828 5197 4.020543 AGATGACTGAAGTCTGTAGGGAC 58.979 47.826 11.55 0.00 44.99 4.46
2861 5230 1.334059 CGTGAAACATATCATGCCGGC 60.334 52.381 22.73 22.73 35.74 6.13
2865 5234 9.497030 TTTACAATTACGTGAAACATATCATGC 57.503 29.630 0.00 0.00 39.46 4.06
2872 5241 9.228636 GTTCAGTTTTACAATTACGTGAAACAT 57.771 29.630 14.63 2.86 43.86 2.71
2873 5242 8.235226 TGTTCAGTTTTACAATTACGTGAAACA 58.765 29.630 14.63 0.00 43.86 2.83
2874 5243 8.603983 TGTTCAGTTTTACAATTACGTGAAAC 57.396 30.769 0.00 7.73 42.55 2.78
2875 5244 8.452534 ACTGTTCAGTTTTACAATTACGTGAAA 58.547 29.630 0.00 0.00 0.00 2.69
2876 5245 7.976826 ACTGTTCAGTTTTACAATTACGTGAA 58.023 30.769 0.00 0.00 0.00 3.18
2877 5246 7.542534 ACTGTTCAGTTTTACAATTACGTGA 57.457 32.000 0.00 0.00 0.00 4.35
2878 5247 8.520258 CAAACTGTTCAGTTTTACAATTACGTG 58.480 33.333 22.90 8.89 39.68 4.49
2879 5248 8.238631 ACAAACTGTTCAGTTTTACAATTACGT 58.761 29.630 22.90 14.01 39.68 3.57
2923 5292 0.746063 ATGCACATTTACCATGCCGG 59.254 50.000 0.00 0.00 38.63 6.13
2937 5306 3.332761 TCAAGTCGTTTGTTGATGCAC 57.667 42.857 0.00 0.00 38.01 4.57
2954 5334 7.756558 TCATGCAATTACGTGAAACATATCAA 58.243 30.769 0.00 0.00 35.74 2.57
2959 5339 6.874297 CATTCATGCAATTACGTGAAACAT 57.126 33.333 15.56 0.00 45.87 2.71
3001 5381 6.649141 GGATGTTTTGGGTGAAGTTTAATTCC 59.351 38.462 0.00 0.00 0.00 3.01
3012 5392 2.006805 TGCATGGATGTTTTGGGTGA 57.993 45.000 0.00 0.00 0.00 4.02
3015 5395 3.264104 GAACATGCATGGATGTTTTGGG 58.736 45.455 36.25 11.25 44.78 4.12
3024 5404 1.743431 CGGCTACTGAACATGCATGGA 60.743 52.381 29.41 12.65 0.00 3.41
3037 5417 0.397535 TATTCCCCGGTTCGGCTACT 60.398 55.000 0.00 0.00 46.86 2.57
3055 5435 3.118629 TGTGCAAAACCAAGCAACCATTA 60.119 39.130 0.00 0.00 43.20 1.90
3106 5486 1.452399 GAAACGAGCTGAACTGACGTC 59.548 52.381 9.11 9.11 36.20 4.34
3144 5524 4.063967 AGCGCAATCCGACCACGA 62.064 61.111 11.47 0.00 42.66 4.35
3165 5705 0.939577 CGACGAGATAACCATGGCCG 60.940 60.000 13.04 8.53 0.00 6.13
3177 5717 1.201647 GTTCTCAATCCCACGACGAGA 59.798 52.381 0.00 0.00 31.26 4.04
3180 5720 1.790755 TTGTTCTCAATCCCACGACG 58.209 50.000 0.00 0.00 0.00 5.12
3214 5754 6.101650 ACATCAGATACGAGCCATTTGATA 57.898 37.500 0.00 0.00 28.99 2.15
3221 5761 3.023832 TCAGAACATCAGATACGAGCCA 58.976 45.455 0.00 0.00 0.00 4.75
3226 5766 4.655762 TCCCTTCAGAACATCAGATACG 57.344 45.455 0.00 0.00 0.00 3.06
3235 5775 1.140312 ACCAGCTTCCCTTCAGAACA 58.860 50.000 0.00 0.00 0.00 3.18
3238 5778 0.979665 CTCACCAGCTTCCCTTCAGA 59.020 55.000 0.00 0.00 0.00 3.27
3240 5780 0.768221 ACCTCACCAGCTTCCCTTCA 60.768 55.000 0.00 0.00 0.00 3.02
3243 5783 1.763770 CAACCTCACCAGCTTCCCT 59.236 57.895 0.00 0.00 0.00 4.20
3244 5784 1.303643 CCAACCTCACCAGCTTCCC 60.304 63.158 0.00 0.00 0.00 3.97
3280 5820 7.775561 TGATCGATGCTAAGATCTAGCCTATAA 59.224 37.037 0.54 3.89 42.62 0.98
3286 5826 6.155827 ACTTTGATCGATGCTAAGATCTAGC 58.844 40.000 0.54 13.93 42.62 3.42
3287 5827 8.726068 TCTACTTTGATCGATGCTAAGATCTAG 58.274 37.037 0.54 5.95 42.62 2.43
3288 5828 8.622948 TCTACTTTGATCGATGCTAAGATCTA 57.377 34.615 0.54 6.65 42.62 1.98
3289 5829 7.517614 TCTACTTTGATCGATGCTAAGATCT 57.482 36.000 0.54 0.00 42.62 2.75
3290 5830 8.393395 GATCTACTTTGATCGATGCTAAGATC 57.607 38.462 0.54 9.10 42.52 2.75
3304 5844 9.788960 GTGCATATATACATCGATCTACTTTGA 57.211 33.333 0.00 0.00 0.00 2.69
3305 5845 9.573133 TGTGCATATATACATCGATCTACTTTG 57.427 33.333 0.00 0.00 0.00 2.77
3311 5851 8.864087 ACCATATGTGCATATATACATCGATCT 58.136 33.333 14.77 0.00 38.41 2.75
3312 5852 9.481340 AACCATATGTGCATATATACATCGATC 57.519 33.333 14.77 0.00 38.41 3.69
3313 5853 9.264719 CAACCATATGTGCATATATACATCGAT 57.735 33.333 14.77 0.00 38.41 3.59
3314 5854 7.224557 GCAACCATATGTGCATATATACATCGA 59.775 37.037 14.77 0.00 38.41 3.59
3315 5855 7.347448 GCAACCATATGTGCATATATACATCG 58.653 38.462 14.77 3.72 38.41 3.84
3316 5856 7.224557 TCGCAACCATATGTGCATATATACATC 59.775 37.037 14.77 4.42 38.41 3.06
3317 5857 7.047271 TCGCAACCATATGTGCATATATACAT 58.953 34.615 14.77 3.25 40.39 2.29
3318 5858 6.402222 TCGCAACCATATGTGCATATATACA 58.598 36.000 14.77 0.00 33.01 2.29
3319 5859 6.902224 TCGCAACCATATGTGCATATATAC 57.098 37.500 14.77 3.50 33.01 1.47
3320 5860 9.606631 TTTATCGCAACCATATGTGCATATATA 57.393 29.630 14.77 3.57 33.01 0.86
3321 5861 8.504812 TTTATCGCAACCATATGTGCATATAT 57.495 30.769 16.05 9.95 33.01 0.86
3322 5862 7.913674 TTTATCGCAACCATATGTGCATATA 57.086 32.000 16.05 5.56 33.01 0.86
3323 5863 6.816134 TTTATCGCAACCATATGTGCATAT 57.184 33.333 16.05 0.31 34.50 1.78
3324 5864 6.429385 TGATTTATCGCAACCATATGTGCATA 59.571 34.615 16.05 10.66 0.00 3.14
3325 5865 5.241285 TGATTTATCGCAACCATATGTGCAT 59.759 36.000 16.05 11.39 0.00 3.96
3326 5866 4.578105 TGATTTATCGCAACCATATGTGCA 59.422 37.500 16.05 6.17 0.00 4.57
3327 5867 5.107109 TGATTTATCGCAACCATATGTGC 57.893 39.130 7.98 7.98 0.00 4.57
3328 5868 6.901265 TCATGATTTATCGCAACCATATGTG 58.099 36.000 1.24 0.00 0.00 3.21
3329 5869 6.712095 ACTCATGATTTATCGCAACCATATGT 59.288 34.615 0.00 0.00 0.00 2.29
3330 5870 7.019418 CACTCATGATTTATCGCAACCATATG 58.981 38.462 0.00 0.00 0.00 1.78
3331 5871 6.936335 TCACTCATGATTTATCGCAACCATAT 59.064 34.615 0.00 0.00 0.00 1.78
3332 5872 6.287525 TCACTCATGATTTATCGCAACCATA 58.712 36.000 0.00 0.00 0.00 2.74
3333 5873 5.125356 TCACTCATGATTTATCGCAACCAT 58.875 37.500 0.00 0.00 0.00 3.55
3334 5874 4.512484 TCACTCATGATTTATCGCAACCA 58.488 39.130 0.00 0.00 0.00 3.67
3335 5875 4.553547 GCTCACTCATGATTTATCGCAACC 60.554 45.833 0.00 0.00 33.22 3.77
3336 5876 4.034394 TGCTCACTCATGATTTATCGCAAC 59.966 41.667 0.00 0.00 33.22 4.17
3337 5877 4.190772 TGCTCACTCATGATTTATCGCAA 58.809 39.130 0.00 0.00 33.22 4.85
3338 5878 3.795877 TGCTCACTCATGATTTATCGCA 58.204 40.909 0.00 0.00 33.22 5.10
3339 5879 5.636965 ACTATGCTCACTCATGATTTATCGC 59.363 40.000 0.00 0.00 33.22 4.58
3340 5880 6.400834 GCACTATGCTCACTCATGATTTATCG 60.401 42.308 0.00 0.00 40.96 2.92
3341 5881 6.829703 GCACTATGCTCACTCATGATTTATC 58.170 40.000 0.00 0.00 40.96 1.75
3342 5882 6.798315 GCACTATGCTCACTCATGATTTAT 57.202 37.500 0.00 0.00 40.96 1.40
3362 5902 3.824028 TCACGTGGGAGTGAACAGCAC 62.824 57.143 17.00 0.00 46.81 4.40
3363 5903 1.227527 CACGTGGGAGTGAACAGCA 60.228 57.895 7.95 0.00 44.43 4.41
3364 5904 1.069090 TCACGTGGGAGTGAACAGC 59.931 57.895 17.00 0.00 46.81 4.40
3379 5919 7.680982 TGTTGTATATTAAGTGCACGAATCAC 58.319 34.615 19.39 17.84 34.80 3.06
3380 5920 7.835634 TGTTGTATATTAAGTGCACGAATCA 57.164 32.000 19.39 11.39 0.00 2.57
3381 5921 7.373441 GCTTGTTGTATATTAAGTGCACGAATC 59.627 37.037 19.39 9.43 0.00 2.52
3382 5922 7.065803 AGCTTGTTGTATATTAAGTGCACGAAT 59.934 33.333 19.63 19.63 0.00 3.34
3383 5923 6.370442 AGCTTGTTGTATATTAAGTGCACGAA 59.630 34.615 12.01 10.45 0.00 3.85
3384 5924 5.872617 AGCTTGTTGTATATTAAGTGCACGA 59.127 36.000 12.01 0.00 0.00 4.35
3385 5925 6.106877 AGCTTGTTGTATATTAAGTGCACG 57.893 37.500 12.01 0.00 0.00 5.34
3386 5926 7.305474 ACAAGCTTGTTGTATATTAAGTGCAC 58.695 34.615 26.36 9.40 38.47 4.57
3387 5927 7.447374 ACAAGCTTGTTGTATATTAAGTGCA 57.553 32.000 26.36 0.00 38.47 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.