Multiple sequence alignment - TraesCS7D01G053900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G053900 chr7D 100.000 4329 0 0 1 4329 28413579 28417907 0.000000e+00 7995.0
1 TraesCS7D01G053900 chr7D 85.962 691 86 6 2784 3471 28435723 28436405 0.000000e+00 728.0
2 TraesCS7D01G053900 chr7D 84.211 76 10 1 4179 4254 28562551 28562624 6.010000e-09 73.1
3 TraesCS7D01G053900 chrUn 91.121 3818 255 49 417 4175 81993345 81997137 0.000000e+00 5096.0
4 TraesCS7D01G053900 chrUn 94.574 129 6 1 293 421 81991119 81991246 9.500000e-47 198.0
5 TraesCS7D01G053900 chr4A 93.664 1373 66 8 642 2009 702173387 702172031 0.000000e+00 2034.0
6 TraesCS7D01G053900 chr4A 96.096 794 31 0 2052 2845 702172035 702171242 0.000000e+00 1295.0
7 TraesCS7D01G053900 chr4A 87.284 464 36 11 3365 3824 702171244 702170800 3.860000e-140 508.0
8 TraesCS7D01G053900 chr4A 89.082 403 43 1 2784 3185 702278806 702279208 2.320000e-137 499.0
9 TraesCS7D01G053900 chr4A 84.766 256 21 7 417 654 702178581 702178326 1.560000e-59 241.0
10 TraesCS7D01G053900 chr4A 84.766 256 21 7 417 654 702181833 702181578 1.560000e-59 241.0
11 TraesCS7D01G053900 chr4A 84.766 256 21 9 417 654 702202887 702202632 1.560000e-59 241.0
12 TraesCS7D01G053900 chr4A 84.766 256 21 9 417 654 702204512 702204257 1.560000e-59 241.0
13 TraesCS7D01G053900 chr4A 84.766 256 21 7 417 654 702206136 702205881 1.560000e-59 241.0
14 TraesCS7D01G053900 chr4A 84.436 257 22 10 417 655 702194761 702194505 2.010000e-58 237.0
15 TraesCS7D01G053900 chr4A 84.375 256 22 7 417 654 702186703 702186448 7.240000e-58 235.0
16 TraesCS7D01G053900 chr4A 84.375 256 22 7 417 654 702189955 702189700 7.240000e-58 235.0
17 TraesCS7D01G053900 chr4A 84.375 256 22 10 417 654 702199637 702199382 7.240000e-58 235.0
18 TraesCS7D01G053900 chr4A 84.375 256 22 10 417 654 702201262 702201007 7.240000e-58 235.0
19 TraesCS7D01G053900 chr4A 84.127 252 26 5 417 654 702198009 702197758 9.360000e-57 231.0
20 TraesCS7D01G053900 chr4A 83.984 256 23 7 417 654 702176955 702176700 3.370000e-56 230.0
21 TraesCS7D01G053900 chr4A 83.594 256 24 9 417 654 702232715 702232460 1.570000e-54 224.0
22 TraesCS7D01G053900 chr2A 83.516 1001 157 7 2310 3306 692849375 692850371 0.000000e+00 928.0
23 TraesCS7D01G053900 chr2B 82.993 1029 169 6 2281 3306 657844083 657845108 0.000000e+00 926.0
24 TraesCS7D01G053900 chr2D 82.983 999 166 4 2310 3306 552193842 552194838 0.000000e+00 900.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G053900 chr7D 28413579 28417907 4328 False 7995.000000 7995 100.000000 1 4329 1 chr7D.!!$F1 4328
1 TraesCS7D01G053900 chr7D 28435723 28436405 682 False 728.000000 728 85.962000 2784 3471 1 chr7D.!!$F2 687
2 TraesCS7D01G053900 chrUn 81991119 81997137 6018 False 2647.000000 5096 92.847500 293 4175 2 chrUn.!!$F1 3882
3 TraesCS7D01G053900 chr4A 702170800 702181833 11033 True 758.166667 2034 88.426667 417 3824 6 chr4A.!!$R2 3407
4 TraesCS7D01G053900 chr4A 702194505 702206136 11631 True 237.285714 241 84.515857 417 655 7 chr4A.!!$R4 238
5 TraesCS7D01G053900 chr4A 702186448 702189955 3507 True 235.000000 235 84.375000 417 654 2 chr4A.!!$R3 237
6 TraesCS7D01G053900 chr2A 692849375 692850371 996 False 928.000000 928 83.516000 2310 3306 1 chr2A.!!$F1 996
7 TraesCS7D01G053900 chr2B 657844083 657845108 1025 False 926.000000 926 82.993000 2281 3306 1 chr2B.!!$F1 1025
8 TraesCS7D01G053900 chr2D 552193842 552194838 996 False 900.000000 900 82.983000 2310 3306 1 chr2D.!!$F1 996

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.104934 ACACCACAGTCTCTTCCCCT 60.105 55.000 0.00 0.0 0.0 4.79 F
275 276 0.106708 CGCCATATACTGCCCACTGT 59.893 55.000 0.00 0.0 0.0 3.55 F
1393 14278 1.151668 CACGCCTTTCACCTTCTCAG 58.848 55.000 0.00 0.0 0.0 3.35 F
1522 14407 1.303561 GGAAGCATCACCAGTGGCA 60.304 57.895 9.78 0.0 0.0 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 14385 0.325933 CACTGGTGATGCTTCCCTCA 59.674 55.000 0.00 0.00 0.00 3.86 R
2048 14933 0.587768 TCTGTTGATGCACTTGTGCG 59.412 50.000 18.99 5.02 37.69 5.34 R
2257 15149 1.202940 AGGCCTCCACCTGAAAAAGAC 60.203 52.381 0.00 0.00 39.13 3.01 R
3450 16344 0.537188 ATCCATTTCCTCGTCGCACT 59.463 50.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 6.563222 TGGTACAAATAGTGTTTTACCTGC 57.437 37.500 16.75 0.00 41.98 4.85
39 40 5.179742 TGGTACAAATAGTGTTTTACCTGCG 59.820 40.000 16.75 0.00 41.98 5.18
40 41 5.409214 GGTACAAATAGTGTTTTACCTGCGA 59.591 40.000 12.33 0.00 41.98 5.10
41 42 6.073112 GGTACAAATAGTGTTTTACCTGCGAA 60.073 38.462 12.33 0.00 41.98 4.70
42 43 6.569179 ACAAATAGTGTTTTACCTGCGAAT 57.431 33.333 0.00 0.00 37.01 3.34
43 44 6.608610 ACAAATAGTGTTTTACCTGCGAATC 58.391 36.000 0.00 0.00 37.01 2.52
44 45 6.205853 ACAAATAGTGTTTTACCTGCGAATCA 59.794 34.615 0.00 0.00 37.01 2.57
45 46 7.094377 ACAAATAGTGTTTTACCTGCGAATCAT 60.094 33.333 0.00 0.00 37.01 2.45
46 47 7.391148 AATAGTGTTTTACCTGCGAATCATT 57.609 32.000 0.00 0.00 0.00 2.57
47 48 5.705609 AGTGTTTTACCTGCGAATCATTT 57.294 34.783 0.00 0.00 0.00 2.32
48 49 6.084326 AGTGTTTTACCTGCGAATCATTTT 57.916 33.333 0.00 0.00 0.00 1.82
49 50 6.149633 AGTGTTTTACCTGCGAATCATTTTC 58.850 36.000 0.00 0.00 0.00 2.29
50 51 5.344933 GTGTTTTACCTGCGAATCATTTTCC 59.655 40.000 0.00 0.00 0.00 3.13
51 52 5.242838 TGTTTTACCTGCGAATCATTTTCCT 59.757 36.000 0.00 0.00 0.00 3.36
52 53 5.560966 TTTACCTGCGAATCATTTTCCTC 57.439 39.130 0.00 0.00 0.00 3.71
53 54 2.369394 ACCTGCGAATCATTTTCCTCC 58.631 47.619 0.00 0.00 0.00 4.30
54 55 1.331756 CCTGCGAATCATTTTCCTCCG 59.668 52.381 0.00 0.00 0.00 4.63
55 56 1.331756 CTGCGAATCATTTTCCTCCGG 59.668 52.381 0.00 0.00 0.00 5.14
56 57 0.663153 GCGAATCATTTTCCTCCGGG 59.337 55.000 0.00 0.00 0.00 5.73
57 58 2.017113 GCGAATCATTTTCCTCCGGGT 61.017 52.381 0.00 0.00 0.00 5.28
58 59 1.940613 CGAATCATTTTCCTCCGGGTC 59.059 52.381 0.00 0.00 0.00 4.46
59 60 2.420129 CGAATCATTTTCCTCCGGGTCT 60.420 50.000 0.00 0.00 0.00 3.85
60 61 3.621558 GAATCATTTTCCTCCGGGTCTT 58.378 45.455 0.00 0.00 0.00 3.01
61 62 2.781681 TCATTTTCCTCCGGGTCTTC 57.218 50.000 0.00 0.00 0.00 2.87
62 63 1.066430 TCATTTTCCTCCGGGTCTTCG 60.066 52.381 0.00 0.00 0.00 3.79
63 64 0.981943 ATTTTCCTCCGGGTCTTCGT 59.018 50.000 0.00 0.00 0.00 3.85
64 65 0.319405 TTTTCCTCCGGGTCTTCGTC 59.681 55.000 0.00 0.00 0.00 4.20
65 66 1.870055 TTTCCTCCGGGTCTTCGTCG 61.870 60.000 0.00 0.00 0.00 5.12
66 67 3.823330 CCTCCGGGTCTTCGTCGG 61.823 72.222 0.00 0.00 44.59 4.79
67 68 3.823330 CTCCGGGTCTTCGTCGGG 61.823 72.222 0.00 0.00 43.54 5.14
70 71 4.125695 CGGGTCTTCGTCGGGGTC 62.126 72.222 0.00 0.00 0.00 4.46
71 72 2.679287 GGGTCTTCGTCGGGGTCT 60.679 66.667 0.00 0.00 0.00 3.85
72 73 2.708865 GGGTCTTCGTCGGGGTCTC 61.709 68.421 0.00 0.00 0.00 3.36
73 74 1.678300 GGTCTTCGTCGGGGTCTCT 60.678 63.158 0.00 0.00 0.00 3.10
74 75 1.507174 GTCTTCGTCGGGGTCTCTG 59.493 63.158 0.00 0.00 0.00 3.35
75 76 2.182030 CTTCGTCGGGGTCTCTGC 59.818 66.667 0.00 0.00 0.00 4.26
76 77 2.282958 TTCGTCGGGGTCTCTGCT 60.283 61.111 0.00 0.00 0.00 4.24
77 78 1.878656 CTTCGTCGGGGTCTCTGCTT 61.879 60.000 0.00 0.00 0.00 3.91
78 79 1.469335 TTCGTCGGGGTCTCTGCTTT 61.469 55.000 0.00 0.00 0.00 3.51
79 80 1.738099 CGTCGGGGTCTCTGCTTTG 60.738 63.158 0.00 0.00 0.00 2.77
80 81 1.671742 GTCGGGGTCTCTGCTTTGA 59.328 57.895 0.00 0.00 0.00 2.69
81 82 0.390472 GTCGGGGTCTCTGCTTTGAG 60.390 60.000 0.00 0.00 35.52 3.02
82 83 0.832135 TCGGGGTCTCTGCTTTGAGT 60.832 55.000 0.00 0.00 35.68 3.41
83 84 0.895530 CGGGGTCTCTGCTTTGAGTA 59.104 55.000 0.00 0.00 35.68 2.59
84 85 1.134965 CGGGGTCTCTGCTTTGAGTAG 60.135 57.143 0.00 0.00 35.68 2.57
85 86 2.180276 GGGGTCTCTGCTTTGAGTAGA 58.820 52.381 0.00 0.00 34.53 2.59
86 87 2.093921 GGGGTCTCTGCTTTGAGTAGAC 60.094 54.545 0.00 0.00 31.92 2.59
87 88 2.563179 GGGTCTCTGCTTTGAGTAGACA 59.437 50.000 0.00 0.00 38.63 3.41
88 89 3.580731 GGTCTCTGCTTTGAGTAGACAC 58.419 50.000 0.00 0.00 38.63 3.67
89 90 3.257127 GGTCTCTGCTTTGAGTAGACACT 59.743 47.826 0.00 0.00 38.63 3.55
90 91 4.459685 GGTCTCTGCTTTGAGTAGACACTA 59.540 45.833 0.00 0.00 38.63 2.74
91 92 5.395642 GTCTCTGCTTTGAGTAGACACTAC 58.604 45.833 0.00 0.00 37.20 2.73
92 93 5.048643 GTCTCTGCTTTGAGTAGACACTACA 60.049 44.000 10.78 0.00 37.20 2.74
93 94 5.712446 TCTCTGCTTTGAGTAGACACTACAT 59.288 40.000 10.78 0.00 31.92 2.29
94 95 5.714047 TCTGCTTTGAGTAGACACTACATG 58.286 41.667 10.78 0.00 31.92 3.21
95 96 8.659709 TCTCTGCTTTGAGTAGACACTACATGT 61.660 40.741 2.69 2.69 38.58 3.21
105 106 3.232213 ACACTACATGTCTTACCTGCG 57.768 47.619 0.00 0.00 36.54 5.18
106 107 2.823747 ACACTACATGTCTTACCTGCGA 59.176 45.455 0.00 0.00 36.54 5.10
107 108 3.257375 ACACTACATGTCTTACCTGCGAA 59.743 43.478 0.00 0.00 36.54 4.70
108 109 4.081642 ACACTACATGTCTTACCTGCGAAT 60.082 41.667 0.00 0.00 36.54 3.34
109 110 4.504461 CACTACATGTCTTACCTGCGAATC 59.496 45.833 0.00 0.00 0.00 2.52
110 111 3.610040 ACATGTCTTACCTGCGAATCA 57.390 42.857 0.00 0.00 0.00 2.57
111 112 4.142609 ACATGTCTTACCTGCGAATCAT 57.857 40.909 0.00 0.00 0.00 2.45
112 113 4.517285 ACATGTCTTACCTGCGAATCATT 58.483 39.130 0.00 0.00 0.00 2.57
113 114 4.943705 ACATGTCTTACCTGCGAATCATTT 59.056 37.500 0.00 0.00 0.00 2.32
114 115 5.415701 ACATGTCTTACCTGCGAATCATTTT 59.584 36.000 0.00 0.00 0.00 1.82
115 116 5.545658 TGTCTTACCTGCGAATCATTTTC 57.454 39.130 0.00 0.00 0.00 2.29
116 117 4.394920 TGTCTTACCTGCGAATCATTTTCC 59.605 41.667 0.00 0.00 0.00 3.13
117 118 4.636206 GTCTTACCTGCGAATCATTTTCCT 59.364 41.667 0.00 0.00 0.00 3.36
118 119 5.815740 GTCTTACCTGCGAATCATTTTCCTA 59.184 40.000 0.00 0.00 0.00 2.94
119 120 6.315393 GTCTTACCTGCGAATCATTTTCCTAA 59.685 38.462 0.00 0.00 0.00 2.69
120 121 7.012421 GTCTTACCTGCGAATCATTTTCCTAAT 59.988 37.037 0.00 0.00 0.00 1.73
121 122 5.757850 ACCTGCGAATCATTTTCCTAATC 57.242 39.130 0.00 0.00 0.00 1.75
122 123 5.440610 ACCTGCGAATCATTTTCCTAATCT 58.559 37.500 0.00 0.00 0.00 2.40
123 124 5.888161 ACCTGCGAATCATTTTCCTAATCTT 59.112 36.000 0.00 0.00 0.00 2.40
124 125 7.054124 ACCTGCGAATCATTTTCCTAATCTTA 58.946 34.615 0.00 0.00 0.00 2.10
125 126 7.227512 ACCTGCGAATCATTTTCCTAATCTTAG 59.772 37.037 0.00 0.00 0.00 2.18
126 127 6.959361 TGCGAATCATTTTCCTAATCTTAGC 58.041 36.000 0.00 0.00 0.00 3.09
127 128 6.767902 TGCGAATCATTTTCCTAATCTTAGCT 59.232 34.615 0.00 0.00 0.00 3.32
128 129 7.283127 TGCGAATCATTTTCCTAATCTTAGCTT 59.717 33.333 0.00 0.00 0.00 3.74
129 130 8.131731 GCGAATCATTTTCCTAATCTTAGCTTT 58.868 33.333 0.00 0.00 0.00 3.51
130 131 9.443283 CGAATCATTTTCCTAATCTTAGCTTTG 57.557 33.333 0.00 0.00 0.00 2.77
131 132 9.242477 GAATCATTTTCCTAATCTTAGCTTTGC 57.758 33.333 0.00 0.00 0.00 3.68
132 133 7.701539 TCATTTTCCTAATCTTAGCTTTGCA 57.298 32.000 0.00 0.00 0.00 4.08
133 134 8.121305 TCATTTTCCTAATCTTAGCTTTGCAA 57.879 30.769 0.00 0.00 0.00 4.08
134 135 8.028938 TCATTTTCCTAATCTTAGCTTTGCAAC 58.971 33.333 0.00 0.00 0.00 4.17
135 136 6.892658 TTTCCTAATCTTAGCTTTGCAACA 57.107 33.333 0.00 0.00 0.00 3.33
136 137 5.880054 TCCTAATCTTAGCTTTGCAACAC 57.120 39.130 0.00 0.00 0.00 3.32
137 138 4.700213 TCCTAATCTTAGCTTTGCAACACC 59.300 41.667 0.00 0.00 0.00 4.16
138 139 4.458989 CCTAATCTTAGCTTTGCAACACCA 59.541 41.667 0.00 0.00 0.00 4.17
139 140 3.923017 ATCTTAGCTTTGCAACACCAC 57.077 42.857 0.00 0.00 0.00 4.16
140 141 2.649190 TCTTAGCTTTGCAACACCACA 58.351 42.857 0.00 0.00 0.00 4.17
141 142 2.618241 TCTTAGCTTTGCAACACCACAG 59.382 45.455 0.00 0.00 0.00 3.66
142 143 2.051334 TAGCTTTGCAACACCACAGT 57.949 45.000 0.00 0.00 0.00 3.55
143 144 0.740737 AGCTTTGCAACACCACAGTC 59.259 50.000 0.00 0.00 0.00 3.51
144 145 0.740737 GCTTTGCAACACCACAGTCT 59.259 50.000 0.00 0.00 0.00 3.24
145 146 1.268743 GCTTTGCAACACCACAGTCTC 60.269 52.381 0.00 0.00 0.00 3.36
146 147 2.292267 CTTTGCAACACCACAGTCTCT 58.708 47.619 0.00 0.00 0.00 3.10
147 148 2.418368 TTGCAACACCACAGTCTCTT 57.582 45.000 0.00 0.00 0.00 2.85
148 149 1.953559 TGCAACACCACAGTCTCTTC 58.046 50.000 0.00 0.00 0.00 2.87
149 150 1.230324 GCAACACCACAGTCTCTTCC 58.770 55.000 0.00 0.00 0.00 3.46
150 151 1.884235 CAACACCACAGTCTCTTCCC 58.116 55.000 0.00 0.00 0.00 3.97
151 152 0.765510 AACACCACAGTCTCTTCCCC 59.234 55.000 0.00 0.00 0.00 4.81
152 153 0.104934 ACACCACAGTCTCTTCCCCT 60.105 55.000 0.00 0.00 0.00 4.79
153 154 0.322975 CACCACAGTCTCTTCCCCTG 59.677 60.000 0.00 0.00 0.00 4.45
154 155 0.191064 ACCACAGTCTCTTCCCCTGA 59.809 55.000 0.00 0.00 0.00 3.86
155 156 1.352083 CCACAGTCTCTTCCCCTGAA 58.648 55.000 0.00 0.00 0.00 3.02
156 157 1.912043 CCACAGTCTCTTCCCCTGAAT 59.088 52.381 0.00 0.00 0.00 2.57
157 158 2.307098 CCACAGTCTCTTCCCCTGAATT 59.693 50.000 0.00 0.00 0.00 2.17
158 159 3.245052 CCACAGTCTCTTCCCCTGAATTT 60.245 47.826 0.00 0.00 0.00 1.82
159 160 4.006319 CACAGTCTCTTCCCCTGAATTTC 58.994 47.826 0.00 0.00 0.00 2.17
160 161 3.913163 ACAGTCTCTTCCCCTGAATTTCT 59.087 43.478 0.00 0.00 0.00 2.52
161 162 4.352298 ACAGTCTCTTCCCCTGAATTTCTT 59.648 41.667 0.00 0.00 0.00 2.52
162 163 4.940654 CAGTCTCTTCCCCTGAATTTCTTC 59.059 45.833 0.00 0.00 0.00 2.87
163 164 4.018870 AGTCTCTTCCCCTGAATTTCTTCC 60.019 45.833 0.00 0.00 0.00 3.46
164 165 3.055094 TCTCTTCCCCTGAATTTCTTCCG 60.055 47.826 0.00 0.00 0.00 4.30
165 166 2.642807 TCTTCCCCTGAATTTCTTCCGT 59.357 45.455 0.00 0.00 0.00 4.69
166 167 3.073946 TCTTCCCCTGAATTTCTTCCGTT 59.926 43.478 0.00 0.00 0.00 4.44
167 168 4.287585 TCTTCCCCTGAATTTCTTCCGTTA 59.712 41.667 0.00 0.00 0.00 3.18
168 169 4.216411 TCCCCTGAATTTCTTCCGTTAG 57.784 45.455 0.00 0.00 0.00 2.34
169 170 3.841845 TCCCCTGAATTTCTTCCGTTAGA 59.158 43.478 0.00 0.00 0.00 2.10
170 171 4.473559 TCCCCTGAATTTCTTCCGTTAGAT 59.526 41.667 0.00 0.00 0.00 1.98
171 172 5.664006 TCCCCTGAATTTCTTCCGTTAGATA 59.336 40.000 0.00 0.00 0.00 1.98
172 173 5.992217 CCCCTGAATTTCTTCCGTTAGATAG 59.008 44.000 0.00 0.00 0.00 2.08
173 174 6.183360 CCCCTGAATTTCTTCCGTTAGATAGA 60.183 42.308 0.00 0.00 0.00 1.98
174 175 6.926272 CCCTGAATTTCTTCCGTTAGATAGAG 59.074 42.308 0.00 0.00 0.00 2.43
175 176 7.418025 CCCTGAATTTCTTCCGTTAGATAGAGT 60.418 40.741 0.00 0.00 0.00 3.24
176 177 7.650104 CCTGAATTTCTTCCGTTAGATAGAGTC 59.350 40.741 0.00 0.00 0.00 3.36
177 178 8.063200 TGAATTTCTTCCGTTAGATAGAGTCA 57.937 34.615 0.00 0.00 0.00 3.41
178 179 8.528643 TGAATTTCTTCCGTTAGATAGAGTCAA 58.471 33.333 0.00 0.00 0.00 3.18
179 180 8.705048 AATTTCTTCCGTTAGATAGAGTCAAC 57.295 34.615 0.00 0.00 0.00 3.18
180 181 7.463961 TTTCTTCCGTTAGATAGAGTCAACT 57.536 36.000 0.00 0.00 0.00 3.16
181 182 7.463961 TTCTTCCGTTAGATAGAGTCAACTT 57.536 36.000 0.00 0.00 0.00 2.66
182 183 6.853720 TCTTCCGTTAGATAGAGTCAACTTG 58.146 40.000 0.00 0.00 0.00 3.16
183 184 6.433404 TCTTCCGTTAGATAGAGTCAACTTGT 59.567 38.462 0.00 0.00 0.00 3.16
184 185 6.585695 TCCGTTAGATAGAGTCAACTTGTT 57.414 37.500 0.00 0.00 0.00 2.83
185 186 6.618811 TCCGTTAGATAGAGTCAACTTGTTC 58.381 40.000 0.00 0.00 0.00 3.18
186 187 6.433404 TCCGTTAGATAGAGTCAACTTGTTCT 59.567 38.462 0.00 4.67 0.00 3.01
187 188 6.528423 CCGTTAGATAGAGTCAACTTGTTCTG 59.472 42.308 0.00 0.00 0.00 3.02
188 189 6.034044 CGTTAGATAGAGTCAACTTGTTCTGC 59.966 42.308 0.00 0.00 0.00 4.26
189 190 5.474578 AGATAGAGTCAACTTGTTCTGCA 57.525 39.130 0.00 0.00 0.00 4.41
190 191 5.477510 AGATAGAGTCAACTTGTTCTGCAG 58.522 41.667 7.63 7.63 0.00 4.41
191 192 2.216898 AGAGTCAACTTGTTCTGCAGC 58.783 47.619 9.47 0.00 0.00 5.25
192 193 1.942657 GAGTCAACTTGTTCTGCAGCA 59.057 47.619 9.47 0.00 0.00 4.41
193 194 2.355756 GAGTCAACTTGTTCTGCAGCAA 59.644 45.455 9.47 7.73 0.00 3.91
194 195 2.754552 AGTCAACTTGTTCTGCAGCAAA 59.245 40.909 9.47 2.06 0.00 3.68
195 196 2.854185 GTCAACTTGTTCTGCAGCAAAC 59.146 45.455 9.47 10.13 0.00 2.93
196 197 1.847999 CAACTTGTTCTGCAGCAAACG 59.152 47.619 9.47 0.00 0.00 3.60
197 198 1.378531 ACTTGTTCTGCAGCAAACGA 58.621 45.000 9.47 8.39 0.00 3.85
198 199 1.742831 ACTTGTTCTGCAGCAAACGAA 59.257 42.857 9.47 6.03 0.00 3.85
199 200 2.358898 ACTTGTTCTGCAGCAAACGAAT 59.641 40.909 9.47 0.00 0.00 3.34
200 201 2.404265 TGTTCTGCAGCAAACGAATG 57.596 45.000 9.47 0.00 0.00 2.67
201 202 1.055338 GTTCTGCAGCAAACGAATGC 58.945 50.000 9.47 8.76 46.78 3.56
228 229 9.524496 TGTTATACAGAGTACTTTAGAACCAGA 57.476 33.333 0.00 0.00 32.76 3.86
230 231 9.970553 TTATACAGAGTACTTTAGAACCAGAGA 57.029 33.333 0.00 0.00 0.00 3.10
231 232 8.880991 ATACAGAGTACTTTAGAACCAGAGAA 57.119 34.615 0.00 0.00 0.00 2.87
232 233 7.784470 ACAGAGTACTTTAGAACCAGAGAAT 57.216 36.000 0.00 0.00 0.00 2.40
233 234 7.832769 ACAGAGTACTTTAGAACCAGAGAATC 58.167 38.462 0.00 0.00 0.00 2.52
234 235 7.451877 ACAGAGTACTTTAGAACCAGAGAATCA 59.548 37.037 0.00 0.00 37.82 2.57
235 236 7.973388 CAGAGTACTTTAGAACCAGAGAATCAG 59.027 40.741 0.00 0.00 37.82 2.90
236 237 7.672239 AGAGTACTTTAGAACCAGAGAATCAGT 59.328 37.037 0.00 0.00 37.82 3.41
237 238 8.196378 AGTACTTTAGAACCAGAGAATCAGTT 57.804 34.615 0.00 0.00 37.82 3.16
238 239 8.652290 AGTACTTTAGAACCAGAGAATCAGTTT 58.348 33.333 0.00 0.00 37.82 2.66
239 240 9.924650 GTACTTTAGAACCAGAGAATCAGTTTA 57.075 33.333 0.00 0.00 37.82 2.01
241 242 9.495572 ACTTTAGAACCAGAGAATCAGTTTAAG 57.504 33.333 0.00 0.00 37.82 1.85
242 243 7.907214 TTAGAACCAGAGAATCAGTTTAAGC 57.093 36.000 0.00 0.00 37.82 3.09
243 244 5.869579 AGAACCAGAGAATCAGTTTAAGCA 58.130 37.500 0.00 0.00 37.82 3.91
244 245 6.299141 AGAACCAGAGAATCAGTTTAAGCAA 58.701 36.000 0.00 0.00 37.82 3.91
245 246 6.772716 AGAACCAGAGAATCAGTTTAAGCAAA 59.227 34.615 0.00 0.00 37.82 3.68
246 247 6.959639 ACCAGAGAATCAGTTTAAGCAAAA 57.040 33.333 0.00 0.00 37.82 2.44
247 248 7.530426 ACCAGAGAATCAGTTTAAGCAAAAT 57.470 32.000 0.00 0.00 37.82 1.82
248 249 7.597386 ACCAGAGAATCAGTTTAAGCAAAATC 58.403 34.615 0.00 0.00 37.82 2.17
249 250 7.231317 ACCAGAGAATCAGTTTAAGCAAAATCA 59.769 33.333 0.00 0.00 37.82 2.57
250 251 8.248945 CCAGAGAATCAGTTTAAGCAAAATCAT 58.751 33.333 0.00 0.00 37.82 2.45
251 252 9.286946 CAGAGAATCAGTTTAAGCAAAATCATC 57.713 33.333 0.00 0.00 37.82 2.92
252 253 9.240734 AGAGAATCAGTTTAAGCAAAATCATCT 57.759 29.630 0.00 0.00 37.82 2.90
253 254 9.500864 GAGAATCAGTTTAAGCAAAATCATCTC 57.499 33.333 0.00 0.00 33.17 2.75
254 255 9.017509 AGAATCAGTTTAAGCAAAATCATCTCA 57.982 29.630 0.00 0.00 0.00 3.27
255 256 9.798994 GAATCAGTTTAAGCAAAATCATCTCAT 57.201 29.630 0.00 0.00 0.00 2.90
256 257 9.798994 AATCAGTTTAAGCAAAATCATCTCATC 57.201 29.630 0.00 0.00 0.00 2.92
257 258 7.466805 TCAGTTTAAGCAAAATCATCTCATCG 58.533 34.615 0.00 0.00 0.00 3.84
258 259 6.195983 CAGTTTAAGCAAAATCATCTCATCGC 59.804 38.462 0.00 0.00 0.00 4.58
259 260 3.705043 AAGCAAAATCATCTCATCGCC 57.295 42.857 0.00 0.00 0.00 5.54
260 261 2.646930 AGCAAAATCATCTCATCGCCA 58.353 42.857 0.00 0.00 0.00 5.69
261 262 3.220110 AGCAAAATCATCTCATCGCCAT 58.780 40.909 0.00 0.00 0.00 4.40
262 263 4.392047 AGCAAAATCATCTCATCGCCATA 58.608 39.130 0.00 0.00 0.00 2.74
263 264 5.008331 AGCAAAATCATCTCATCGCCATAT 58.992 37.500 0.00 0.00 0.00 1.78
264 265 6.175471 AGCAAAATCATCTCATCGCCATATA 58.825 36.000 0.00 0.00 0.00 0.86
265 266 6.093219 AGCAAAATCATCTCATCGCCATATAC 59.907 38.462 0.00 0.00 0.00 1.47
266 267 6.093219 GCAAAATCATCTCATCGCCATATACT 59.907 38.462 0.00 0.00 0.00 2.12
267 268 7.461918 CAAAATCATCTCATCGCCATATACTG 58.538 38.462 0.00 0.00 0.00 2.74
268 269 4.115401 TCATCTCATCGCCATATACTGC 57.885 45.455 0.00 0.00 0.00 4.40
269 270 3.118992 TCATCTCATCGCCATATACTGCC 60.119 47.826 0.00 0.00 0.00 4.85
270 271 1.550524 TCTCATCGCCATATACTGCCC 59.449 52.381 0.00 0.00 0.00 5.36
271 272 1.276138 CTCATCGCCATATACTGCCCA 59.724 52.381 0.00 0.00 0.00 5.36
272 273 1.001974 TCATCGCCATATACTGCCCAC 59.998 52.381 0.00 0.00 0.00 4.61
273 274 1.002430 CATCGCCATATACTGCCCACT 59.998 52.381 0.00 0.00 0.00 4.00
274 275 0.392706 TCGCCATATACTGCCCACTG 59.607 55.000 0.00 0.00 0.00 3.66
275 276 0.106708 CGCCATATACTGCCCACTGT 59.893 55.000 0.00 0.00 0.00 3.55
276 277 1.873903 CGCCATATACTGCCCACTGTC 60.874 57.143 0.00 0.00 0.00 3.51
277 278 1.417890 GCCATATACTGCCCACTGTCT 59.582 52.381 0.00 0.00 0.00 3.41
278 279 2.158755 GCCATATACTGCCCACTGTCTT 60.159 50.000 0.00 0.00 0.00 3.01
279 280 3.071023 GCCATATACTGCCCACTGTCTTA 59.929 47.826 0.00 0.00 0.00 2.10
280 281 4.444306 GCCATATACTGCCCACTGTCTTAA 60.444 45.833 0.00 0.00 0.00 1.85
281 282 5.300752 CCATATACTGCCCACTGTCTTAAG 58.699 45.833 0.00 0.00 0.00 1.85
282 283 5.163301 CCATATACTGCCCACTGTCTTAAGT 60.163 44.000 1.63 0.00 0.00 2.24
283 284 4.910458 ATACTGCCCACTGTCTTAAGTT 57.090 40.909 1.63 0.00 0.00 2.66
284 285 7.418597 CCATATACTGCCCACTGTCTTAAGTTA 60.419 40.741 1.63 0.00 0.00 2.24
285 286 4.004196 ACTGCCCACTGTCTTAAGTTAC 57.996 45.455 1.63 0.00 0.00 2.50
286 287 3.244457 ACTGCCCACTGTCTTAAGTTACC 60.244 47.826 1.63 0.00 0.00 2.85
287 288 2.976882 TGCCCACTGTCTTAAGTTACCT 59.023 45.455 1.63 0.00 0.00 3.08
288 289 3.393278 TGCCCACTGTCTTAAGTTACCTT 59.607 43.478 1.63 0.00 34.56 3.50
289 290 4.001652 GCCCACTGTCTTAAGTTACCTTC 58.998 47.826 1.63 0.00 31.89 3.46
290 291 4.262938 GCCCACTGTCTTAAGTTACCTTCT 60.263 45.833 1.63 0.00 31.89 2.85
291 292 5.745181 GCCCACTGTCTTAAGTTACCTTCTT 60.745 44.000 1.63 0.00 31.89 2.52
307 308 9.880157 GTTACCTTCTTTGTATATTCAGTACCA 57.120 33.333 0.00 0.00 0.00 3.25
316 317 6.826668 TGTATATTCAGTACCATTCACCAGG 58.173 40.000 0.00 0.00 0.00 4.45
337 338 1.519408 ACAACTGCCATGTTACCGAC 58.481 50.000 0.00 0.00 0.00 4.79
340 341 1.739929 CTGCCATGTTACCGACGCA 60.740 57.895 0.00 0.00 0.00 5.24
357 358 2.563179 ACGCAGATCTTGGTTGTCTAGT 59.437 45.455 0.00 0.00 0.00 2.57
369 370 2.195741 TGTCTAGTGACGCCAGTACT 57.804 50.000 0.00 0.00 45.70 2.73
461 5817 6.183360 TGCGTGTAGTACCTTCAAACGATATA 60.183 38.462 11.47 0.00 0.00 0.86
473 5829 9.577110 CCTTCAAACGATATACTGTAGTTGTTA 57.423 33.333 8.28 0.00 0.00 2.41
497 5853 1.965643 TGGCCTAACTGACGTACAAGT 59.034 47.619 3.32 0.00 0.00 3.16
513 5887 5.291128 CGTACAAGTATTACCAGCCTTGAAG 59.709 44.000 5.34 0.00 38.11 3.02
549 5923 4.379918 GGAAAGCAGTCCATGTCTTTAAGC 60.380 45.833 0.95 0.00 36.23 3.09
560 5934 2.076863 GTCTTTAAGCTCCATGCACGT 58.923 47.619 0.00 0.00 45.94 4.49
618 9244 3.486383 ACTTGACCCATTCAACGTCAAT 58.514 40.909 2.63 0.00 43.50 2.57
623 9249 4.582656 TGACCCATTCAACGTCAATTTCTT 59.417 37.500 0.00 0.00 33.72 2.52
708 13583 4.608948 TCTCTTCCAGGTCTCTGTTTTC 57.391 45.455 0.00 0.00 39.31 2.29
749 13624 4.980339 ACTTGGGCAATCATTTTCCTTT 57.020 36.364 0.00 0.00 0.00 3.11
808 13683 3.793465 GCAAGAAAAGTCTGCACCAGAAC 60.793 47.826 0.00 0.00 42.46 3.01
849 13729 7.984617 GCAGTGAAGAGGAAAGATCTATAACTT 59.015 37.037 0.00 0.00 0.00 2.66
881 13761 6.785191 AGTGCACGGTTATTTATCATCTTTG 58.215 36.000 12.01 0.00 0.00 2.77
885 13765 6.418956 CACGGTTATTTATCATCTTTGTCCG 58.581 40.000 0.00 0.00 39.09 4.79
894 13774 8.746052 TTTATCATCTTTGTCCGTGGAATATT 57.254 30.769 0.00 0.00 0.00 1.28
904 13784 5.659525 TGTCCGTGGAATATTAGAGGAGAAA 59.340 40.000 0.00 0.00 0.00 2.52
958 13838 1.414181 CCCACAGATACTAGCACCCTG 59.586 57.143 0.00 0.00 0.00 4.45
966 13846 2.887151 ACTAGCACCCTGAAGCAATT 57.113 45.000 0.00 0.00 0.00 2.32
978 13858 3.466836 TGAAGCAATTATCCTACCTGCG 58.533 45.455 0.00 0.00 38.07 5.18
983 13868 5.621193 AGCAATTATCCTACCTGCGTAAAT 58.379 37.500 0.00 0.00 38.07 1.40
990 13875 3.131577 TCCTACCTGCGTAAATTGATCGT 59.868 43.478 0.00 0.00 0.00 3.73
1010 13895 3.576648 GTTCGATCGGGATGAAGATACC 58.423 50.000 16.41 0.00 0.00 2.73
1045 13930 2.639286 CTTGTGCCACAACTCCGC 59.361 61.111 6.08 0.00 33.96 5.54
1062 13947 3.723260 TCCGCATATATTTCTCGTGCAA 58.277 40.909 0.00 0.00 35.63 4.08
1105 13990 1.608590 CATTGTTCTGCACCGGTTTCT 59.391 47.619 2.97 0.00 0.00 2.52
1122 14007 4.403734 GTTTCTCCCAATCAAACCCTACA 58.596 43.478 0.00 0.00 0.00 2.74
1146 14031 3.933722 CCCGGCAGCTCCATCGAT 61.934 66.667 0.00 0.00 34.01 3.59
1218 14103 4.313282 CAGGCTTCGACATATCATGTGAT 58.687 43.478 0.00 0.68 45.03 3.06
1393 14278 1.151668 CACGCCTTTCACCTTCTCAG 58.848 55.000 0.00 0.00 0.00 3.35
1500 14385 2.016704 CGTGTCGTTCTGCGCTTCT 61.017 57.895 9.73 0.00 41.07 2.85
1522 14407 1.303561 GGAAGCATCACCAGTGGCA 60.304 57.895 9.78 0.00 0.00 4.92
1722 14607 2.507471 GTTCTCCAGGGATCACTTGGAT 59.493 50.000 14.23 0.00 39.53 3.41
1969 14854 8.519526 CCTTTACATTTTGATTGCCACTAACTA 58.480 33.333 0.00 0.00 0.00 2.24
2002 14887 8.788238 ATGCCTTATTATGATTTCCCTTTCTT 57.212 30.769 0.00 0.00 0.00 2.52
2048 14933 4.765339 AGACAAAAATAAGTACCCCTGCAC 59.235 41.667 0.00 0.00 0.00 4.57
2155 15046 6.156256 TGGGTGCAGTAGAGATAAAACACTAT 59.844 38.462 0.00 0.00 0.00 2.12
2216 15108 5.596361 TGTTCCCTTTTGAAATGAACTGCTA 59.404 36.000 13.10 0.00 36.98 3.49
2231 15123 7.692460 TGAACTGCTAAATCTGAATGAACAT 57.308 32.000 0.00 0.00 0.00 2.71
2243 15135 7.080353 TCTGAATGAACATGCACTTATTCAG 57.920 36.000 21.75 21.75 46.32 3.02
2250 15142 5.051891 ACATGCACTTATTCAGCAAAGTC 57.948 39.130 0.00 0.00 42.15 3.01
2257 15149 5.352569 CACTTATTCAGCAAAGTCCCTACTG 59.647 44.000 0.00 0.00 35.62 2.74
2320 15212 0.982852 TGCTCGGATTCTGGACCCAT 60.983 55.000 0.00 0.00 0.00 4.00
2524 15416 0.320160 GGACGGTCTACAAAGGCGTT 60.320 55.000 8.23 0.00 0.00 4.84
2848 15740 7.201679 CCAATTATTCACAGAGATGTCAAGTCC 60.202 40.741 0.00 0.00 0.00 3.85
3142 16034 1.348064 TCCATGAGAACCGGTTGTCT 58.652 50.000 35.76 24.44 34.38 3.41
3197 16089 4.585879 TGGGGCTAGACATGTTAAAACTC 58.414 43.478 0.00 0.00 0.00 3.01
3239 16131 1.470494 GCTTAAGGCTGAAAGGTGAGC 59.530 52.381 4.29 0.00 38.06 4.26
3319 16211 2.162408 GCAACACTGCTTAGTCAATCCC 59.838 50.000 0.00 0.00 45.74 3.85
3325 16217 3.452627 ACTGCTTAGTCAATCCCGAAGAT 59.547 43.478 0.00 0.00 36.48 2.40
3405 16299 7.345691 TGGTATATTGATGTGGAAAGATGTGT 58.654 34.615 0.00 0.00 0.00 3.72
3491 16385 8.978472 TGGATACTGTTTATGAACTAAGCTAGT 58.022 33.333 1.75 0.00 38.00 2.57
3531 16426 1.545428 CCACATATGGCTTGCCGGTAT 60.545 52.381 7.80 5.51 39.82 2.73
3547 16442 3.188460 CCGGTATGACCAAAGACAAAGTG 59.812 47.826 0.00 0.00 38.47 3.16
3680 16584 5.499004 ACTTGGTGCTAGAAGGTGAATAA 57.501 39.130 0.00 0.00 0.00 1.40
3693 16597 7.184862 AGAAGGTGAATAAATCATTCCTTGGT 58.815 34.615 5.40 0.00 41.94 3.67
3740 16653 3.287312 ACATGTCAAGACGGCATTTTG 57.713 42.857 0.00 0.00 0.00 2.44
3810 16723 2.494073 GGAAACACCCTTCACAACAACA 59.506 45.455 0.00 0.00 0.00 3.33
3812 16725 3.866883 AACACCCTTCACAACAACAAG 57.133 42.857 0.00 0.00 0.00 3.16
3825 16738 9.554395 TTCACAACAACAAGTATCTTCTTATCA 57.446 29.630 0.00 0.00 0.00 2.15
3875 16788 0.833949 CTACCAGGCTTCTTCCCCTC 59.166 60.000 0.00 0.00 0.00 4.30
3876 16789 0.118346 TACCAGGCTTCTTCCCCTCA 59.882 55.000 0.00 0.00 0.00 3.86
3878 16791 1.204113 CCAGGCTTCTTCCCCTCAGT 61.204 60.000 0.00 0.00 0.00 3.41
3880 16793 0.474660 AGGCTTCTTCCCCTCAGTGT 60.475 55.000 0.00 0.00 0.00 3.55
3881 16794 0.322008 GGCTTCTTCCCCTCAGTGTG 60.322 60.000 0.00 0.00 0.00 3.82
3886 16799 3.474798 TCTTCCCCTCAGTGTGAGTAT 57.525 47.619 3.35 0.00 42.80 2.12
3890 16803 5.422331 TCTTCCCCTCAGTGTGAGTATTTAG 59.578 44.000 3.35 0.00 42.80 1.85
3914 16827 7.141363 AGTGAAGTCAAGTAATTTCAATGTGC 58.859 34.615 0.00 0.00 31.98 4.57
3930 16843 0.719465 GTGCGGAGGAACACAATACG 59.281 55.000 0.00 0.00 36.77 3.06
3931 16844 0.604073 TGCGGAGGAACACAATACGA 59.396 50.000 0.00 0.00 0.00 3.43
3932 16845 1.278238 GCGGAGGAACACAATACGAG 58.722 55.000 0.00 0.00 0.00 4.18
3962 16875 3.864686 CGGATTTCAGCGGTGGCG 61.865 66.667 15.67 0.00 46.35 5.69
3963 16876 2.746277 GGATTTCAGCGGTGGCGT 60.746 61.111 15.67 0.22 46.35 5.68
3973 16892 1.222115 GCGGTGGCGTATTGGATCTC 61.222 60.000 0.00 0.00 0.00 2.75
3987 16906 0.105039 GATCTCACCTAAGTGGCCGG 59.895 60.000 0.00 0.00 44.64 6.13
3989 16908 3.682292 CTCACCTAAGTGGCCGGCC 62.682 68.421 39.40 39.40 44.64 6.13
4039 16958 4.404654 CCCTTCGTTGCCAAGCGC 62.405 66.667 0.00 0.00 38.31 5.92
4040 16959 3.357079 CCTTCGTTGCCAAGCGCT 61.357 61.111 2.64 2.64 38.78 5.92
4041 16960 2.639286 CTTCGTTGCCAAGCGCTT 59.361 55.556 18.98 18.98 38.78 4.68
4043 16962 3.235292 TTCGTTGCCAAGCGCTTCG 62.235 57.895 22.21 20.16 38.78 3.79
4061 16980 3.415087 GCAGCATGGGGGAGGACT 61.415 66.667 0.00 0.00 35.86 3.85
4111 17034 3.342477 GCTCCCTTGCCCCCTTCT 61.342 66.667 0.00 0.00 0.00 2.85
4121 17044 3.839432 CCCCTTCTCTCGTCGCCC 61.839 72.222 0.00 0.00 0.00 6.13
4139 17062 2.514592 ATGCGCACGGGAAGATGG 60.515 61.111 14.90 0.00 0.00 3.51
4141 17064 4.467084 GCGCACGGGAAGATGGGA 62.467 66.667 0.30 0.00 0.00 4.37
4143 17066 1.153168 CGCACGGGAAGATGGGAAT 60.153 57.895 0.00 0.00 0.00 3.01
4145 17068 0.107214 GCACGGGAAGATGGGAATCA 60.107 55.000 0.00 0.00 0.00 2.57
4147 17070 2.722094 CACGGGAAGATGGGAATCAAA 58.278 47.619 0.00 0.00 0.00 2.69
4149 17072 3.701040 CACGGGAAGATGGGAATCAAATT 59.299 43.478 0.00 0.00 0.00 1.82
4150 17073 4.160252 CACGGGAAGATGGGAATCAAATTT 59.840 41.667 0.00 0.00 0.00 1.82
4152 17075 5.248248 ACGGGAAGATGGGAATCAAATTTTT 59.752 36.000 0.00 0.00 0.00 1.94
4195 17118 7.677454 TGAGAATCATATGGTGTCAATATGC 57.323 36.000 2.13 0.00 42.56 3.14
4196 17119 6.369615 TGAGAATCATATGGTGTCAATATGCG 59.630 38.462 2.13 0.00 42.56 4.73
4197 17120 5.645067 AGAATCATATGGTGTCAATATGCGG 59.355 40.000 2.13 0.00 0.00 5.69
4198 17121 4.350368 TCATATGGTGTCAATATGCGGT 57.650 40.909 2.13 0.00 0.00 5.68
4199 17122 4.314961 TCATATGGTGTCAATATGCGGTC 58.685 43.478 2.13 0.00 0.00 4.79
4200 17123 1.967319 ATGGTGTCAATATGCGGTCC 58.033 50.000 0.00 0.00 0.00 4.46
4201 17124 0.908910 TGGTGTCAATATGCGGTCCT 59.091 50.000 0.00 0.00 0.00 3.85
4202 17125 1.299541 GGTGTCAATATGCGGTCCTG 58.700 55.000 0.00 0.00 0.00 3.86
4203 17126 1.134521 GGTGTCAATATGCGGTCCTGA 60.135 52.381 0.00 0.00 0.00 3.86
4204 17127 2.627945 GTGTCAATATGCGGTCCTGAA 58.372 47.619 0.00 0.00 0.00 3.02
4205 17128 2.351726 GTGTCAATATGCGGTCCTGAAC 59.648 50.000 0.00 0.00 0.00 3.18
4206 17129 2.027653 TGTCAATATGCGGTCCTGAACA 60.028 45.455 0.00 0.00 0.00 3.18
4207 17130 2.609459 GTCAATATGCGGTCCTGAACAG 59.391 50.000 0.00 0.00 0.00 3.16
4212 17135 4.410400 CGGTCCTGAACAGGCCCC 62.410 72.222 14.15 14.58 43.56 5.80
4216 17139 3.820425 CCTGAACAGGCCCCACTA 58.180 61.111 7.95 0.00 42.44 2.74
4217 17140 2.311287 CCTGAACAGGCCCCACTAT 58.689 57.895 7.95 0.00 42.44 2.12
4218 17141 1.507140 CCTGAACAGGCCCCACTATA 58.493 55.000 7.95 0.00 42.44 1.31
4219 17142 1.417890 CCTGAACAGGCCCCACTATAG 59.582 57.143 7.95 0.00 42.44 1.31
4220 17143 1.417890 CTGAACAGGCCCCACTATAGG 59.582 57.143 0.00 0.00 0.00 2.57
4221 17144 1.009060 TGAACAGGCCCCACTATAGGA 59.991 52.381 0.00 0.00 0.00 2.94
4222 17145 1.416772 GAACAGGCCCCACTATAGGAC 59.583 57.143 0.00 0.00 0.00 3.85
4223 17146 0.341961 ACAGGCCCCACTATAGGACA 59.658 55.000 0.00 0.00 31.34 4.02
4224 17147 1.274184 ACAGGCCCCACTATAGGACAA 60.274 52.381 0.00 0.00 31.34 3.18
4225 17148 2.057922 CAGGCCCCACTATAGGACAAT 58.942 52.381 0.00 0.00 31.34 2.71
4226 17149 2.443255 CAGGCCCCACTATAGGACAATT 59.557 50.000 0.00 0.00 31.34 2.32
4227 17150 3.650942 CAGGCCCCACTATAGGACAATTA 59.349 47.826 0.00 0.00 31.34 1.40
4228 17151 3.910627 AGGCCCCACTATAGGACAATTAG 59.089 47.826 0.00 0.00 31.34 1.73
4229 17152 3.651423 GGCCCCACTATAGGACAATTAGT 59.349 47.826 4.43 0.00 0.00 2.24
4230 17153 4.104261 GGCCCCACTATAGGACAATTAGTT 59.896 45.833 4.43 0.00 0.00 2.24
4231 17154 5.398695 GGCCCCACTATAGGACAATTAGTTT 60.399 44.000 4.43 0.00 0.00 2.66
4232 17155 5.531287 GCCCCACTATAGGACAATTAGTTTG 59.469 44.000 4.43 0.00 41.36 2.93
4233 17156 5.531287 CCCCACTATAGGACAATTAGTTTGC 59.469 44.000 4.43 0.00 39.03 3.68
4234 17157 6.119536 CCCACTATAGGACAATTAGTTTGCA 58.880 40.000 4.43 0.00 39.03 4.08
4235 17158 6.260936 CCCACTATAGGACAATTAGTTTGCAG 59.739 42.308 4.43 0.00 39.03 4.41
4236 17159 6.260936 CCACTATAGGACAATTAGTTTGCAGG 59.739 42.308 4.43 0.00 39.03 4.85
4237 17160 7.047891 CACTATAGGACAATTAGTTTGCAGGA 58.952 38.462 4.43 0.00 39.03 3.86
4238 17161 7.716998 CACTATAGGACAATTAGTTTGCAGGAT 59.283 37.037 4.43 0.00 39.03 3.24
4239 17162 6.949352 ATAGGACAATTAGTTTGCAGGATG 57.051 37.500 0.00 0.00 39.03 3.51
4240 17163 4.019174 AGGACAATTAGTTTGCAGGATGG 58.981 43.478 0.00 0.00 39.03 3.51
4241 17164 3.131046 GGACAATTAGTTTGCAGGATGGG 59.869 47.826 0.00 0.00 39.03 4.00
4242 17165 2.497273 ACAATTAGTTTGCAGGATGGGC 59.503 45.455 0.00 0.00 39.03 5.36
4243 17166 2.762327 CAATTAGTTTGCAGGATGGGCT 59.238 45.455 0.00 0.00 35.86 5.19
4244 17167 2.603075 TTAGTTTGCAGGATGGGCTT 57.397 45.000 0.00 0.00 35.86 4.35
4245 17168 2.603075 TAGTTTGCAGGATGGGCTTT 57.397 45.000 0.00 0.00 35.86 3.51
4246 17169 2.603075 AGTTTGCAGGATGGGCTTTA 57.397 45.000 0.00 0.00 35.86 1.85
4247 17170 2.450476 AGTTTGCAGGATGGGCTTTAG 58.550 47.619 0.00 0.00 35.86 1.85
4248 17171 1.134995 GTTTGCAGGATGGGCTTTAGC 60.135 52.381 0.00 0.00 37.06 3.09
4249 17172 0.332632 TTGCAGGATGGGCTTTAGCT 59.667 50.000 1.26 0.00 37.71 3.32
4250 17173 0.332632 TGCAGGATGGGCTTTAGCTT 59.667 50.000 0.00 0.00 37.71 3.74
4251 17174 1.272648 TGCAGGATGGGCTTTAGCTTT 60.273 47.619 0.00 0.00 37.71 3.51
4252 17175 1.827344 GCAGGATGGGCTTTAGCTTTT 59.173 47.619 0.00 0.00 37.71 2.27
4253 17176 3.023832 GCAGGATGGGCTTTAGCTTTTA 58.976 45.455 0.00 0.00 37.71 1.52
4254 17177 3.067320 GCAGGATGGGCTTTAGCTTTTAG 59.933 47.826 0.00 0.00 37.71 1.85
4255 17178 3.633986 CAGGATGGGCTTTAGCTTTTAGG 59.366 47.826 0.00 0.00 41.70 2.69
4256 17179 2.959030 GGATGGGCTTTAGCTTTTAGGG 59.041 50.000 0.00 0.00 41.70 3.53
4257 17180 1.847328 TGGGCTTTAGCTTTTAGGGC 58.153 50.000 0.00 0.00 41.70 5.19
4258 17181 1.112113 GGGCTTTAGCTTTTAGGGCC 58.888 55.000 0.00 0.00 41.70 5.80
4259 17182 1.618616 GGGCTTTAGCTTTTAGGGCCA 60.619 52.381 6.18 0.00 41.70 5.36
4260 17183 1.751351 GGCTTTAGCTTTTAGGGCCAG 59.249 52.381 6.18 0.00 41.70 4.85
4261 17184 2.447443 GCTTTAGCTTTTAGGGCCAGT 58.553 47.619 6.18 0.00 38.21 4.00
4262 17185 2.826128 GCTTTAGCTTTTAGGGCCAGTT 59.174 45.455 6.18 0.00 38.21 3.16
4263 17186 3.367395 GCTTTAGCTTTTAGGGCCAGTTG 60.367 47.826 6.18 0.00 38.21 3.16
4264 17187 3.518992 TTAGCTTTTAGGGCCAGTTGT 57.481 42.857 6.18 0.00 0.00 3.32
4265 17188 2.381752 AGCTTTTAGGGCCAGTTGTT 57.618 45.000 6.18 0.00 0.00 2.83
4266 17189 2.677914 AGCTTTTAGGGCCAGTTGTTT 58.322 42.857 6.18 0.00 0.00 2.83
4267 17190 3.038280 AGCTTTTAGGGCCAGTTGTTTT 58.962 40.909 6.18 0.00 0.00 2.43
4268 17191 4.219919 AGCTTTTAGGGCCAGTTGTTTTA 58.780 39.130 6.18 0.00 0.00 1.52
4269 17192 4.038763 AGCTTTTAGGGCCAGTTGTTTTAC 59.961 41.667 6.18 0.00 0.00 2.01
4270 17193 4.202172 GCTTTTAGGGCCAGTTGTTTTACA 60.202 41.667 6.18 0.00 0.00 2.41
4271 17194 5.523438 TTTTAGGGCCAGTTGTTTTACAG 57.477 39.130 6.18 0.00 0.00 2.74
4272 17195 1.995376 AGGGCCAGTTGTTTTACAGG 58.005 50.000 6.18 0.00 0.00 4.00
4273 17196 1.497286 AGGGCCAGTTGTTTTACAGGA 59.503 47.619 6.18 0.00 0.00 3.86
4274 17197 2.110011 AGGGCCAGTTGTTTTACAGGAT 59.890 45.455 6.18 0.00 0.00 3.24
4275 17198 2.231235 GGGCCAGTTGTTTTACAGGATG 59.769 50.000 4.39 0.00 46.00 3.51
4326 17249 9.101655 CAAAATTTATTTGGAGAAGCCTAATGG 57.898 33.333 0.00 0.00 41.31 3.16
4327 17250 7.978099 AATTTATTTGGAGAAGCCTAATGGT 57.022 32.000 0.00 0.00 41.31 3.55
4328 17251 7.978099 ATTTATTTGGAGAAGCCTAATGGTT 57.022 32.000 0.00 0.00 41.31 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.974980 CAGGTAAAACACTATTTGTACCAAAAT 57.025 29.630 5.27 0.00 36.97 1.82
12 13 7.921745 GCAGGTAAAACACTATTTGTACCAAAA 59.078 33.333 5.27 0.00 36.97 2.44
13 14 7.427214 GCAGGTAAAACACTATTTGTACCAAA 58.573 34.615 5.27 0.00 36.97 3.28
14 15 6.293516 CGCAGGTAAAACACTATTTGTACCAA 60.294 38.462 5.27 0.00 36.97 3.67
15 16 5.179742 CGCAGGTAAAACACTATTTGTACCA 59.820 40.000 5.27 0.00 36.97 3.25
16 17 5.409214 TCGCAGGTAAAACACTATTTGTACC 59.591 40.000 0.00 0.00 37.51 3.34
17 18 6.470557 TCGCAGGTAAAACACTATTTGTAC 57.529 37.500 0.00 0.00 37.51 2.90
18 19 7.388224 TGATTCGCAGGTAAAACACTATTTGTA 59.612 33.333 0.00 0.00 37.51 2.41
19 20 6.205853 TGATTCGCAGGTAAAACACTATTTGT 59.794 34.615 0.00 0.00 41.74 2.83
20 21 6.607689 TGATTCGCAGGTAAAACACTATTTG 58.392 36.000 0.00 0.00 0.00 2.32
21 22 6.811253 TGATTCGCAGGTAAAACACTATTT 57.189 33.333 0.00 0.00 0.00 1.40
22 23 7.391148 AATGATTCGCAGGTAAAACACTATT 57.609 32.000 0.00 0.00 0.00 1.73
23 24 7.391148 AAATGATTCGCAGGTAAAACACTAT 57.609 32.000 0.00 0.00 0.00 2.12
24 25 6.811253 AAATGATTCGCAGGTAAAACACTA 57.189 33.333 0.00 0.00 0.00 2.74
25 26 5.705609 AAATGATTCGCAGGTAAAACACT 57.294 34.783 0.00 0.00 0.00 3.55
26 27 5.344933 GGAAAATGATTCGCAGGTAAAACAC 59.655 40.000 0.00 0.00 0.00 3.32
27 28 5.242838 AGGAAAATGATTCGCAGGTAAAACA 59.757 36.000 0.00 0.00 0.00 2.83
28 29 5.709966 AGGAAAATGATTCGCAGGTAAAAC 58.290 37.500 0.00 0.00 0.00 2.43
29 30 5.105917 GGAGGAAAATGATTCGCAGGTAAAA 60.106 40.000 0.00 0.00 0.00 1.52
30 31 4.398044 GGAGGAAAATGATTCGCAGGTAAA 59.602 41.667 0.00 0.00 0.00 2.01
31 32 3.945285 GGAGGAAAATGATTCGCAGGTAA 59.055 43.478 0.00 0.00 0.00 2.85
32 33 3.541632 GGAGGAAAATGATTCGCAGGTA 58.458 45.455 0.00 0.00 0.00 3.08
33 34 2.369394 GGAGGAAAATGATTCGCAGGT 58.631 47.619 0.00 0.00 0.00 4.00
34 35 1.331756 CGGAGGAAAATGATTCGCAGG 59.668 52.381 0.00 0.00 0.00 4.85
35 36 2.744787 CGGAGGAAAATGATTCGCAG 57.255 50.000 0.00 0.00 0.00 5.18
50 51 3.823330 CCCGACGAAGACCCGGAG 61.823 72.222 0.73 0.00 45.58 4.63
53 54 4.125695 GACCCCGACGAAGACCCG 62.126 72.222 0.00 0.00 0.00 5.28
54 55 2.679287 AGACCCCGACGAAGACCC 60.679 66.667 0.00 0.00 0.00 4.46
55 56 1.678300 AGAGACCCCGACGAAGACC 60.678 63.158 0.00 0.00 0.00 3.85
56 57 1.507174 CAGAGACCCCGACGAAGAC 59.493 63.158 0.00 0.00 0.00 3.01
57 58 2.341101 GCAGAGACCCCGACGAAGA 61.341 63.158 0.00 0.00 0.00 2.87
58 59 1.878656 AAGCAGAGACCCCGACGAAG 61.879 60.000 0.00 0.00 0.00 3.79
59 60 1.469335 AAAGCAGAGACCCCGACGAA 61.469 55.000 0.00 0.00 0.00 3.85
60 61 1.906824 AAAGCAGAGACCCCGACGA 60.907 57.895 0.00 0.00 0.00 4.20
61 62 1.738099 CAAAGCAGAGACCCCGACG 60.738 63.158 0.00 0.00 0.00 5.12
62 63 0.390472 CTCAAAGCAGAGACCCCGAC 60.390 60.000 0.00 0.00 37.87 4.79
63 64 0.832135 ACTCAAAGCAGAGACCCCGA 60.832 55.000 7.69 0.00 38.98 5.14
64 65 0.895530 TACTCAAAGCAGAGACCCCG 59.104 55.000 7.69 0.00 38.98 5.73
65 66 2.093921 GTCTACTCAAAGCAGAGACCCC 60.094 54.545 7.69 0.00 38.98 4.95
66 67 2.563179 TGTCTACTCAAAGCAGAGACCC 59.437 50.000 7.69 0.00 38.98 4.46
67 68 3.257127 AGTGTCTACTCAAAGCAGAGACC 59.743 47.826 7.69 0.00 38.98 3.85
68 69 4.513198 AGTGTCTACTCAAAGCAGAGAC 57.487 45.455 7.69 0.00 38.98 3.36
69 70 5.070685 TGTAGTGTCTACTCAAAGCAGAGA 58.929 41.667 7.69 0.00 38.98 3.10
70 71 5.378292 TGTAGTGTCTACTCAAAGCAGAG 57.622 43.478 8.13 0.00 41.44 3.35
71 72 5.243954 ACATGTAGTGTCTACTCAAAGCAGA 59.756 40.000 0.00 0.00 35.77 4.26
72 73 5.473931 ACATGTAGTGTCTACTCAAAGCAG 58.526 41.667 0.00 0.00 35.77 4.24
73 74 5.468540 ACATGTAGTGTCTACTCAAAGCA 57.531 39.130 0.00 0.00 35.77 3.91
85 86 2.823747 TCGCAGGTAAGACATGTAGTGT 59.176 45.455 0.00 0.00 45.83 3.55
86 87 3.503827 TCGCAGGTAAGACATGTAGTG 57.496 47.619 0.00 0.00 31.66 2.74
87 88 4.159693 TGATTCGCAGGTAAGACATGTAGT 59.840 41.667 0.00 0.00 31.66 2.73
88 89 4.682787 TGATTCGCAGGTAAGACATGTAG 58.317 43.478 0.00 0.00 31.66 2.74
89 90 4.729227 TGATTCGCAGGTAAGACATGTA 57.271 40.909 0.00 0.00 31.66 2.29
90 91 3.610040 TGATTCGCAGGTAAGACATGT 57.390 42.857 0.00 0.00 31.66 3.21
91 92 5.490139 AAATGATTCGCAGGTAAGACATG 57.510 39.130 0.00 0.00 32.28 3.21
92 93 5.066505 GGAAAATGATTCGCAGGTAAGACAT 59.933 40.000 0.00 0.00 0.00 3.06
93 94 4.394920 GGAAAATGATTCGCAGGTAAGACA 59.605 41.667 0.00 0.00 0.00 3.41
94 95 4.636206 AGGAAAATGATTCGCAGGTAAGAC 59.364 41.667 0.00 0.00 0.00 3.01
95 96 4.843728 AGGAAAATGATTCGCAGGTAAGA 58.156 39.130 0.00 0.00 0.00 2.10
96 97 6.677781 TTAGGAAAATGATTCGCAGGTAAG 57.322 37.500 0.00 0.00 0.00 2.34
97 98 7.054124 AGATTAGGAAAATGATTCGCAGGTAA 58.946 34.615 0.00 0.00 0.00 2.85
98 99 6.591935 AGATTAGGAAAATGATTCGCAGGTA 58.408 36.000 0.00 0.00 0.00 3.08
99 100 5.440610 AGATTAGGAAAATGATTCGCAGGT 58.559 37.500 0.00 0.00 0.00 4.00
100 101 6.382869 AAGATTAGGAAAATGATTCGCAGG 57.617 37.500 0.00 0.00 0.00 4.85
101 102 7.041508 AGCTAAGATTAGGAAAATGATTCGCAG 60.042 37.037 2.00 0.00 0.00 5.18
102 103 6.767902 AGCTAAGATTAGGAAAATGATTCGCA 59.232 34.615 2.00 0.00 0.00 5.10
103 104 7.195839 AGCTAAGATTAGGAAAATGATTCGC 57.804 36.000 2.00 0.00 0.00 4.70
104 105 9.443283 CAAAGCTAAGATTAGGAAAATGATTCG 57.557 33.333 2.00 0.00 0.00 3.34
105 106 9.242477 GCAAAGCTAAGATTAGGAAAATGATTC 57.758 33.333 2.00 0.00 0.00 2.52
106 107 8.752187 TGCAAAGCTAAGATTAGGAAAATGATT 58.248 29.630 2.00 0.00 0.00 2.57
107 108 8.297470 TGCAAAGCTAAGATTAGGAAAATGAT 57.703 30.769 2.00 0.00 0.00 2.45
108 109 7.701539 TGCAAAGCTAAGATTAGGAAAATGA 57.298 32.000 2.00 0.00 0.00 2.57
109 110 7.814107 TGTTGCAAAGCTAAGATTAGGAAAATG 59.186 33.333 0.00 0.00 0.00 2.32
110 111 7.814587 GTGTTGCAAAGCTAAGATTAGGAAAAT 59.185 33.333 0.00 0.00 0.00 1.82
111 112 7.145323 GTGTTGCAAAGCTAAGATTAGGAAAA 58.855 34.615 0.00 0.00 0.00 2.29
112 113 6.294508 GGTGTTGCAAAGCTAAGATTAGGAAA 60.295 38.462 0.00 0.00 0.00 3.13
113 114 5.183140 GGTGTTGCAAAGCTAAGATTAGGAA 59.817 40.000 0.00 0.00 0.00 3.36
114 115 4.700213 GGTGTTGCAAAGCTAAGATTAGGA 59.300 41.667 0.00 0.00 0.00 2.94
115 116 4.458989 TGGTGTTGCAAAGCTAAGATTAGG 59.541 41.667 0.00 0.00 0.00 2.69
116 117 5.048782 TGTGGTGTTGCAAAGCTAAGATTAG 60.049 40.000 0.00 0.00 0.00 1.73
117 118 4.824537 TGTGGTGTTGCAAAGCTAAGATTA 59.175 37.500 0.00 0.00 0.00 1.75
118 119 3.636300 TGTGGTGTTGCAAAGCTAAGATT 59.364 39.130 0.00 0.00 0.00 2.40
119 120 3.221771 TGTGGTGTTGCAAAGCTAAGAT 58.778 40.909 0.00 0.00 0.00 2.40
120 121 2.618241 CTGTGGTGTTGCAAAGCTAAGA 59.382 45.455 0.00 0.00 0.00 2.10
121 122 2.358898 ACTGTGGTGTTGCAAAGCTAAG 59.641 45.455 0.00 6.32 0.00 2.18
122 123 2.357637 GACTGTGGTGTTGCAAAGCTAA 59.642 45.455 0.00 0.00 0.00 3.09
123 124 1.946768 GACTGTGGTGTTGCAAAGCTA 59.053 47.619 0.00 0.00 0.00 3.32
124 125 0.740737 GACTGTGGTGTTGCAAAGCT 59.259 50.000 0.00 0.00 0.00 3.74
125 126 0.740737 AGACTGTGGTGTTGCAAAGC 59.259 50.000 0.00 2.22 0.00 3.51
126 127 2.292267 AGAGACTGTGGTGTTGCAAAG 58.708 47.619 0.00 0.00 0.00 2.77
127 128 2.418368 AGAGACTGTGGTGTTGCAAA 57.582 45.000 0.00 0.00 0.00 3.68
128 129 2.288666 GAAGAGACTGTGGTGTTGCAA 58.711 47.619 0.00 0.00 0.00 4.08
129 130 1.475034 GGAAGAGACTGTGGTGTTGCA 60.475 52.381 0.00 0.00 0.00 4.08
130 131 1.230324 GGAAGAGACTGTGGTGTTGC 58.770 55.000 0.00 0.00 0.00 4.17
131 132 1.543429 GGGGAAGAGACTGTGGTGTTG 60.543 57.143 0.00 0.00 0.00 3.33
132 133 0.765510 GGGGAAGAGACTGTGGTGTT 59.234 55.000 0.00 0.00 0.00 3.32
133 134 0.104934 AGGGGAAGAGACTGTGGTGT 60.105 55.000 0.00 0.00 0.00 4.16
134 135 0.322975 CAGGGGAAGAGACTGTGGTG 59.677 60.000 0.00 0.00 0.00 4.17
135 136 0.191064 TCAGGGGAAGAGACTGTGGT 59.809 55.000 0.00 0.00 34.02 4.16
136 137 1.352083 TTCAGGGGAAGAGACTGTGG 58.648 55.000 0.00 0.00 34.02 4.17
137 138 3.710209 AATTCAGGGGAAGAGACTGTG 57.290 47.619 0.00 0.00 36.25 3.66
138 139 3.913163 AGAAATTCAGGGGAAGAGACTGT 59.087 43.478 0.00 0.00 36.25 3.55
139 140 4.566426 AGAAATTCAGGGGAAGAGACTG 57.434 45.455 0.00 0.00 36.25 3.51
140 141 4.018870 GGAAGAAATTCAGGGGAAGAGACT 60.019 45.833 0.00 0.00 36.25 3.24
141 142 4.265893 GGAAGAAATTCAGGGGAAGAGAC 58.734 47.826 0.00 0.00 36.25 3.36
142 143 3.055094 CGGAAGAAATTCAGGGGAAGAGA 60.055 47.826 0.00 0.00 36.25 3.10
143 144 3.274288 CGGAAGAAATTCAGGGGAAGAG 58.726 50.000 0.00 0.00 36.25 2.85
144 145 2.642807 ACGGAAGAAATTCAGGGGAAGA 59.357 45.455 0.00 0.00 36.25 2.87
145 146 3.073274 ACGGAAGAAATTCAGGGGAAG 57.927 47.619 0.00 0.00 36.25 3.46
146 147 3.518992 AACGGAAGAAATTCAGGGGAA 57.481 42.857 0.00 0.00 37.45 3.97
147 148 3.841845 TCTAACGGAAGAAATTCAGGGGA 59.158 43.478 0.00 0.00 0.00 4.81
148 149 4.216411 TCTAACGGAAGAAATTCAGGGG 57.784 45.455 0.00 0.00 0.00 4.79
149 150 6.817184 TCTATCTAACGGAAGAAATTCAGGG 58.183 40.000 0.00 0.00 0.00 4.45
150 151 7.493367 ACTCTATCTAACGGAAGAAATTCAGG 58.507 38.462 0.00 0.00 0.00 3.86
151 152 8.191446 TGACTCTATCTAACGGAAGAAATTCAG 58.809 37.037 0.00 0.00 0.00 3.02
152 153 8.063200 TGACTCTATCTAACGGAAGAAATTCA 57.937 34.615 0.00 0.00 0.00 2.57
153 154 8.809478 GTTGACTCTATCTAACGGAAGAAATTC 58.191 37.037 0.00 0.00 0.00 2.17
154 155 8.532819 AGTTGACTCTATCTAACGGAAGAAATT 58.467 33.333 0.00 0.00 0.00 1.82
155 156 8.068892 AGTTGACTCTATCTAACGGAAGAAAT 57.931 34.615 0.00 0.00 0.00 2.17
156 157 7.463961 AGTTGACTCTATCTAACGGAAGAAA 57.536 36.000 0.00 0.00 0.00 2.52
157 158 7.039923 ACAAGTTGACTCTATCTAACGGAAGAA 60.040 37.037 10.54 0.00 0.00 2.52
158 159 6.433404 ACAAGTTGACTCTATCTAACGGAAGA 59.567 38.462 10.54 0.00 0.00 2.87
159 160 6.622549 ACAAGTTGACTCTATCTAACGGAAG 58.377 40.000 10.54 0.00 0.00 3.46
160 161 6.585695 ACAAGTTGACTCTATCTAACGGAA 57.414 37.500 10.54 0.00 0.00 4.30
161 162 6.433404 AGAACAAGTTGACTCTATCTAACGGA 59.567 38.462 10.54 0.00 0.00 4.69
162 163 6.528423 CAGAACAAGTTGACTCTATCTAACGG 59.472 42.308 10.54 0.00 0.00 4.44
163 164 6.034044 GCAGAACAAGTTGACTCTATCTAACG 59.966 42.308 10.54 0.00 0.00 3.18
164 165 6.868864 TGCAGAACAAGTTGACTCTATCTAAC 59.131 38.462 10.54 0.00 0.00 2.34
165 166 6.993079 TGCAGAACAAGTTGACTCTATCTAA 58.007 36.000 10.54 0.00 0.00 2.10
166 167 6.590234 TGCAGAACAAGTTGACTCTATCTA 57.410 37.500 10.54 0.00 0.00 1.98
167 168 5.474578 TGCAGAACAAGTTGACTCTATCT 57.525 39.130 10.54 0.73 0.00 1.98
168 169 4.092675 GCTGCAGAACAAGTTGACTCTATC 59.907 45.833 20.43 6.95 0.00 2.08
169 170 3.999663 GCTGCAGAACAAGTTGACTCTAT 59.000 43.478 20.43 0.00 0.00 1.98
170 171 3.181466 TGCTGCAGAACAAGTTGACTCTA 60.181 43.478 20.43 0.00 0.00 2.43
171 172 2.216898 GCTGCAGAACAAGTTGACTCT 58.783 47.619 20.43 8.05 0.00 3.24
172 173 1.942657 TGCTGCAGAACAAGTTGACTC 59.057 47.619 20.43 5.78 0.00 3.36
173 174 2.042686 TGCTGCAGAACAAGTTGACT 57.957 45.000 20.43 5.73 0.00 3.41
174 175 2.849880 TTGCTGCAGAACAAGTTGAC 57.150 45.000 20.43 3.37 0.00 3.18
175 176 2.477694 CGTTTGCTGCAGAACAAGTTGA 60.478 45.455 20.43 0.00 0.00 3.18
176 177 1.847999 CGTTTGCTGCAGAACAAGTTG 59.152 47.619 20.43 0.00 0.00 3.16
177 178 1.742831 TCGTTTGCTGCAGAACAAGTT 59.257 42.857 20.43 0.00 0.00 2.66
178 179 1.378531 TCGTTTGCTGCAGAACAAGT 58.621 45.000 20.43 0.00 0.00 3.16
179 180 2.473530 TTCGTTTGCTGCAGAACAAG 57.526 45.000 20.43 1.87 0.00 3.16
180 181 2.730069 CATTCGTTTGCTGCAGAACAA 58.270 42.857 20.43 10.48 0.00 2.83
181 182 1.600164 GCATTCGTTTGCTGCAGAACA 60.600 47.619 20.43 3.45 39.57 3.18
182 183 1.055338 GCATTCGTTTGCTGCAGAAC 58.945 50.000 20.43 13.06 39.57 3.01
183 184 3.477504 GCATTCGTTTGCTGCAGAA 57.522 47.368 20.43 2.96 39.57 3.02
190 191 5.163854 ACTCTGTATAACAGCATTCGTTTGC 60.164 40.000 2.12 4.50 45.54 3.68
191 192 6.408858 ACTCTGTATAACAGCATTCGTTTG 57.591 37.500 2.12 0.00 45.54 2.93
192 193 7.321153 AGTACTCTGTATAACAGCATTCGTTT 58.679 34.615 2.12 0.00 45.54 3.60
193 194 6.864342 AGTACTCTGTATAACAGCATTCGTT 58.136 36.000 2.12 0.00 45.54 3.85
194 195 6.452494 AGTACTCTGTATAACAGCATTCGT 57.548 37.500 2.12 0.00 45.54 3.85
195 196 7.757097 AAAGTACTCTGTATAACAGCATTCG 57.243 36.000 0.00 0.00 45.54 3.34
198 199 9.804758 GTTCTAAAGTACTCTGTATAACAGCAT 57.195 33.333 0.00 0.00 45.54 3.79
199 200 8.248945 GGTTCTAAAGTACTCTGTATAACAGCA 58.751 37.037 0.00 0.00 45.54 4.41
200 201 8.248945 TGGTTCTAAAGTACTCTGTATAACAGC 58.751 37.037 0.00 0.00 45.54 4.40
202 203 9.524496 TCTGGTTCTAAAGTACTCTGTATAACA 57.476 33.333 0.00 0.00 28.26 2.41
204 205 9.970553 TCTCTGGTTCTAAAGTACTCTGTATAA 57.029 33.333 0.00 0.00 0.00 0.98
205 206 9.970553 TTCTCTGGTTCTAAAGTACTCTGTATA 57.029 33.333 0.00 0.00 0.00 1.47
206 207 8.880991 TTCTCTGGTTCTAAAGTACTCTGTAT 57.119 34.615 0.00 0.00 0.00 2.29
207 208 8.880991 ATTCTCTGGTTCTAAAGTACTCTGTA 57.119 34.615 0.00 0.00 0.00 2.74
208 209 7.451877 TGATTCTCTGGTTCTAAAGTACTCTGT 59.548 37.037 0.00 0.00 0.00 3.41
209 210 7.831753 TGATTCTCTGGTTCTAAAGTACTCTG 58.168 38.462 0.00 0.00 0.00 3.35
210 211 7.672239 ACTGATTCTCTGGTTCTAAAGTACTCT 59.328 37.037 0.00 0.00 0.00 3.24
211 212 7.832769 ACTGATTCTCTGGTTCTAAAGTACTC 58.167 38.462 0.00 0.00 0.00 2.59
212 213 7.784470 ACTGATTCTCTGGTTCTAAAGTACT 57.216 36.000 0.00 0.00 0.00 2.73
213 214 8.834749 AAACTGATTCTCTGGTTCTAAAGTAC 57.165 34.615 0.00 0.00 0.00 2.73
215 216 9.495572 CTTAAACTGATTCTCTGGTTCTAAAGT 57.504 33.333 0.00 0.00 0.00 2.66
216 217 8.447053 GCTTAAACTGATTCTCTGGTTCTAAAG 58.553 37.037 0.00 0.00 0.00 1.85
217 218 7.936847 TGCTTAAACTGATTCTCTGGTTCTAAA 59.063 33.333 0.00 0.00 0.00 1.85
218 219 7.450074 TGCTTAAACTGATTCTCTGGTTCTAA 58.550 34.615 0.00 0.00 0.00 2.10
219 220 7.004555 TGCTTAAACTGATTCTCTGGTTCTA 57.995 36.000 0.00 0.00 0.00 2.10
220 221 5.869579 TGCTTAAACTGATTCTCTGGTTCT 58.130 37.500 0.00 0.00 0.00 3.01
221 222 6.560253 TTGCTTAAACTGATTCTCTGGTTC 57.440 37.500 0.00 0.00 0.00 3.62
222 223 6.959639 TTTGCTTAAACTGATTCTCTGGTT 57.040 33.333 0.00 0.00 0.00 3.67
223 224 6.959639 TTTTGCTTAAACTGATTCTCTGGT 57.040 33.333 0.00 0.00 0.00 4.00
224 225 7.596494 TGATTTTGCTTAAACTGATTCTCTGG 58.404 34.615 0.00 0.00 0.00 3.86
225 226 9.286946 GATGATTTTGCTTAAACTGATTCTCTG 57.713 33.333 0.00 0.00 0.00 3.35
226 227 9.240734 AGATGATTTTGCTTAAACTGATTCTCT 57.759 29.630 0.00 0.00 0.00 3.10
227 228 9.500864 GAGATGATTTTGCTTAAACTGATTCTC 57.499 33.333 0.00 0.00 0.00 2.87
228 229 9.017509 TGAGATGATTTTGCTTAAACTGATTCT 57.982 29.630 0.00 0.00 0.00 2.40
229 230 9.798994 ATGAGATGATTTTGCTTAAACTGATTC 57.201 29.630 0.00 0.00 0.00 2.52
230 231 9.798994 GATGAGATGATTTTGCTTAAACTGATT 57.201 29.630 0.00 0.00 0.00 2.57
231 232 8.127327 CGATGAGATGATTTTGCTTAAACTGAT 58.873 33.333 0.00 0.00 0.00 2.90
232 233 7.466805 CGATGAGATGATTTTGCTTAAACTGA 58.533 34.615 0.00 0.00 0.00 3.41
233 234 6.195983 GCGATGAGATGATTTTGCTTAAACTG 59.804 38.462 0.00 0.00 0.00 3.16
234 235 6.261118 GCGATGAGATGATTTTGCTTAAACT 58.739 36.000 0.00 0.00 0.00 2.66
235 236 5.456822 GGCGATGAGATGATTTTGCTTAAAC 59.543 40.000 0.00 0.00 0.00 2.01
236 237 5.125257 TGGCGATGAGATGATTTTGCTTAAA 59.875 36.000 0.00 0.00 0.00 1.52
237 238 4.639755 TGGCGATGAGATGATTTTGCTTAA 59.360 37.500 0.00 0.00 0.00 1.85
238 239 4.198530 TGGCGATGAGATGATTTTGCTTA 58.801 39.130 0.00 0.00 0.00 3.09
239 240 3.018856 TGGCGATGAGATGATTTTGCTT 58.981 40.909 0.00 0.00 0.00 3.91
240 241 2.646930 TGGCGATGAGATGATTTTGCT 58.353 42.857 0.00 0.00 0.00 3.91
241 242 3.637998 ATGGCGATGAGATGATTTTGC 57.362 42.857 0.00 0.00 0.00 3.68
242 243 7.461918 CAGTATATGGCGATGAGATGATTTTG 58.538 38.462 0.00 0.00 0.00 2.44
243 244 6.093219 GCAGTATATGGCGATGAGATGATTTT 59.907 38.462 0.00 0.00 0.00 1.82
244 245 5.583854 GCAGTATATGGCGATGAGATGATTT 59.416 40.000 0.00 0.00 0.00 2.17
245 246 5.114780 GCAGTATATGGCGATGAGATGATT 58.885 41.667 0.00 0.00 0.00 2.57
246 247 4.442612 GGCAGTATATGGCGATGAGATGAT 60.443 45.833 0.00 0.00 45.54 2.45
247 248 3.118992 GGCAGTATATGGCGATGAGATGA 60.119 47.826 0.00 0.00 45.54 2.92
248 249 3.193263 GGCAGTATATGGCGATGAGATG 58.807 50.000 0.00 0.00 45.54 2.90
249 250 3.533606 GGCAGTATATGGCGATGAGAT 57.466 47.619 0.00 0.00 45.54 2.75
258 259 3.845781 AAGACAGTGGGCAGTATATGG 57.154 47.619 0.00 0.00 0.00 2.74
259 260 5.918608 ACTTAAGACAGTGGGCAGTATATG 58.081 41.667 10.09 0.00 0.00 1.78
260 261 6.561519 AACTTAAGACAGTGGGCAGTATAT 57.438 37.500 10.09 0.00 0.00 0.86
261 262 6.127253 GGTAACTTAAGACAGTGGGCAGTATA 60.127 42.308 10.09 0.00 0.00 1.47
262 263 4.910458 AACTTAAGACAGTGGGCAGTAT 57.090 40.909 10.09 0.00 0.00 2.12
263 264 4.020839 GGTAACTTAAGACAGTGGGCAGTA 60.021 45.833 10.09 0.00 0.00 2.74
264 265 3.244457 GGTAACTTAAGACAGTGGGCAGT 60.244 47.826 10.09 0.00 0.00 4.40
265 266 3.335579 GGTAACTTAAGACAGTGGGCAG 58.664 50.000 10.09 0.00 0.00 4.85
266 267 3.412237 GGTAACTTAAGACAGTGGGCA 57.588 47.619 10.09 0.00 0.00 5.36
281 282 9.880157 TGGTACTGAATATACAAAGAAGGTAAC 57.120 33.333 0.00 0.00 0.00 2.50
284 285 9.614792 GAATGGTACTGAATATACAAAGAAGGT 57.385 33.333 0.00 0.00 0.00 3.50
285 286 9.613428 TGAATGGTACTGAATATACAAAGAAGG 57.387 33.333 0.00 0.00 0.00 3.46
287 288 9.391006 GGTGAATGGTACTGAATATACAAAGAA 57.609 33.333 0.00 0.00 0.00 2.52
288 289 8.544622 TGGTGAATGGTACTGAATATACAAAGA 58.455 33.333 0.00 0.00 0.00 2.52
289 290 8.731275 TGGTGAATGGTACTGAATATACAAAG 57.269 34.615 0.00 0.00 0.00 2.77
290 291 7.773224 CCTGGTGAATGGTACTGAATATACAAA 59.227 37.037 0.00 0.00 0.00 2.83
291 292 7.092623 ACCTGGTGAATGGTACTGAATATACAA 60.093 37.037 0.00 0.00 34.36 2.41
307 308 1.423541 TGGCAGTTGTACCTGGTGAAT 59.576 47.619 10.23 0.00 32.92 2.57
316 317 2.414138 GTCGGTAACATGGCAGTTGTAC 59.586 50.000 11.08 3.17 33.07 2.90
337 338 2.926200 CACTAGACAACCAAGATCTGCG 59.074 50.000 0.00 0.00 0.00 5.18
340 341 3.367498 GCGTCACTAGACAACCAAGATCT 60.367 47.826 0.00 0.00 45.23 2.75
372 373 0.109132 GAATGGCCTTGGCTTCGTTG 60.109 55.000 11.71 0.00 0.00 4.10
461 5817 3.240302 AGGCCAGTCTAACAACTACAGT 58.760 45.455 5.01 0.00 0.00 3.55
473 5829 1.817447 GTACGTCAGTTAGGCCAGTCT 59.183 52.381 5.01 0.00 0.00 3.24
497 5853 4.101114 TGTCTCCTTCAAGGCTGGTAATA 58.899 43.478 0.00 0.00 34.61 0.98
513 5887 2.746362 CTGCTTTCCACATTCTGTCTCC 59.254 50.000 0.00 0.00 0.00 3.71
549 5923 1.284657 CTTCAGCTACGTGCATGGAG 58.715 55.000 14.31 14.31 45.94 3.86
560 5934 3.016736 GTTTTGGCTATGGCTTCAGCTA 58.983 45.455 0.00 0.00 41.70 3.32
664 12774 3.685139 TTAAGTGCTCCAGAGACTTGG 57.315 47.619 16.25 0.00 39.70 3.61
749 13624 3.741830 TTTGCCGTGCCACTCGTGA 62.742 57.895 0.00 0.00 0.00 4.35
808 13683 0.591170 ACTGCGTCGGAAAATTGTGG 59.409 50.000 0.00 0.00 0.00 4.17
838 13713 5.643339 CACTCGGTGCAAAGTTATAGATC 57.357 43.478 0.00 0.00 0.00 2.75
864 13744 6.540914 TCCACGGACAAAGATGATAAATAACC 59.459 38.462 0.00 0.00 0.00 2.85
881 13761 5.786264 TTCTCCTCTAATATTCCACGGAC 57.214 43.478 0.00 0.00 0.00 4.79
885 13765 8.348507 CAAAGCATTTCTCCTCTAATATTCCAC 58.651 37.037 0.00 0.00 35.03 4.02
894 13774 4.292186 ACTGCAAAGCATTTCTCCTCTA 57.708 40.909 0.00 0.00 35.03 2.43
904 13784 4.248859 CAGTACTCTGTACTGCAAAGCAT 58.751 43.478 20.26 0.00 38.51 3.79
958 13838 3.467803 ACGCAGGTAGGATAATTGCTTC 58.532 45.455 0.00 0.00 32.06 3.86
966 13846 5.010314 ACGATCAATTTACGCAGGTAGGATA 59.990 40.000 0.00 0.00 0.00 2.59
990 13875 2.561419 GGGTATCTTCATCCCGATCGAA 59.439 50.000 18.66 4.45 0.00 3.71
1010 13895 2.900337 GATTACCTTGCGCCCCGG 60.900 66.667 4.18 4.88 0.00 5.73
1045 13930 6.072838 AGGAGCAATTGCACGAGAAATATATG 60.073 38.462 30.89 0.00 45.16 1.78
1062 13947 0.990374 ACAGGCAGAGAAGGAGCAAT 59.010 50.000 0.00 0.00 0.00 3.56
1105 13990 4.020662 GCATTTTGTAGGGTTTGATTGGGA 60.021 41.667 0.00 0.00 0.00 4.37
1146 14031 3.140144 GGATGTTGAAAGGGGATGGGATA 59.860 47.826 0.00 0.00 0.00 2.59
1218 14103 3.213506 CGATATCATTGGCCCTGTTGAA 58.786 45.455 0.00 0.00 0.00 2.69
1393 14278 3.619929 ACGGTGAACTTGTTAAGTGTGTC 59.380 43.478 0.00 0.00 41.91 3.67
1500 14385 0.325933 CACTGGTGATGCTTCCCTCA 59.674 55.000 0.00 0.00 0.00 3.86
1522 14407 4.052518 GCCCACCCCAGAGCATGT 62.053 66.667 0.00 0.00 0.00 3.21
1722 14607 1.001633 GGCAGGTTCGTCAGGTTTCTA 59.998 52.381 0.00 0.00 0.00 2.10
1797 14682 1.644509 TGCACATGTAGGTCTGAGGT 58.355 50.000 0.00 0.00 0.00 3.85
2040 14925 3.663176 CACTTGTGCGTGCAGGGG 61.663 66.667 8.72 0.00 0.00 4.79
2048 14933 0.587768 TCTGTTGATGCACTTGTGCG 59.412 50.000 18.99 5.02 37.69 5.34
2068 14959 5.279256 GGCATGTACAGTTAAAACCACCAAT 60.279 40.000 0.33 0.00 0.00 3.16
2216 15108 8.525316 TGAATAAGTGCATGTTCATTCAGATTT 58.475 29.630 0.00 0.00 30.95 2.17
2231 15123 2.819608 GGGACTTTGCTGAATAAGTGCA 59.180 45.455 0.00 0.00 42.39 4.57
2243 15135 4.578928 TGAAAAAGACAGTAGGGACTTTGC 59.421 41.667 0.00 0.00 41.75 3.68
2250 15142 3.072476 TCCACCTGAAAAAGACAGTAGGG 59.928 47.826 0.00 0.00 34.04 3.53
2257 15149 1.202940 AGGCCTCCACCTGAAAAAGAC 60.203 52.381 0.00 0.00 39.13 3.01
2320 15212 3.243068 GCTTTCTCTTCGTGAAAAGCCAA 60.243 43.478 17.74 0.00 33.70 4.52
2524 15416 4.740634 GCCACGACCATTTGATCAGATAGA 60.741 45.833 0.00 0.00 0.00 1.98
2848 15740 3.374367 TCTCGTCGAGGAGTATGTTTGAG 59.626 47.826 28.71 6.24 35.52 3.02
3142 16034 6.183360 CGTCTACCTGAGGATCTACAATTTCA 60.183 42.308 4.99 0.00 34.92 2.69
3317 16209 3.403038 ACACTCTTGTTCAATCTTCGGG 58.597 45.455 0.00 0.00 28.43 5.14
3319 16211 5.200454 CACAACACTCTTGTTCAATCTTCG 58.800 41.667 0.00 0.00 44.57 3.79
3325 16217 2.163412 GCCACACAACACTCTTGTTCAA 59.837 45.455 0.00 0.00 44.57 2.69
3405 16299 2.031258 TTGCTCTCGGTGTTGTTTCA 57.969 45.000 0.00 0.00 0.00 2.69
3450 16344 0.537188 ATCCATTTCCTCGTCGCACT 59.463 50.000 0.00 0.00 0.00 4.40
3491 16385 4.160329 TGGGCCACCAATTATTACAACAA 58.840 39.130 0.00 0.00 45.87 2.83
3531 16426 3.378112 CAGAAGCACTTTGTCTTTGGTCA 59.622 43.478 0.00 0.00 0.00 4.02
3616 16512 8.338259 GCATAATTACAGTTACAGGATGAACAG 58.662 37.037 0.00 0.00 39.69 3.16
3714 16618 2.076863 GCCGTCTTGACATGTTAAGCT 58.923 47.619 22.13 0.00 0.00 3.74
3718 16622 4.517075 TCAAAATGCCGTCTTGACATGTTA 59.483 37.500 0.00 0.00 0.00 2.41
3723 16627 2.948979 AGTTCAAAATGCCGTCTTGACA 59.051 40.909 1.59 0.00 0.00 3.58
3773 16686 5.185828 GGTGTTTCCTTGAGCCAATTTATCT 59.814 40.000 0.00 0.00 0.00 1.98
3836 16749 9.988350 CTGGTAGCAATAATTACTTAAGTTGTG 57.012 33.333 14.49 4.76 0.00 3.33
3841 16754 8.451908 AAGCCTGGTAGCAATAATTACTTAAG 57.548 34.615 0.00 0.00 34.23 1.85
3847 16760 6.062095 GGAAGAAGCCTGGTAGCAATAATTA 58.938 40.000 0.00 0.00 34.23 1.40
3875 16788 7.653713 ACTTGACTTCACTAAATACTCACACTG 59.346 37.037 0.00 0.00 0.00 3.66
3876 16789 7.727181 ACTTGACTTCACTAAATACTCACACT 58.273 34.615 0.00 0.00 0.00 3.55
3890 16803 6.086765 CGCACATTGAAATTACTTGACTTCAC 59.913 38.462 0.00 0.00 0.00 3.18
3912 16825 0.604073 TCGTATTGTGTTCCTCCGCA 59.396 50.000 0.00 0.00 0.00 5.69
3914 16827 2.649331 ACTCGTATTGTGTTCCTCCG 57.351 50.000 0.00 0.00 0.00 4.63
3926 16839 7.992180 AATCCGTTTAATCGTAAACTCGTAT 57.008 32.000 5.30 0.00 44.68 3.06
3928 16841 6.365789 TGAAATCCGTTTAATCGTAAACTCGT 59.634 34.615 5.30 0.00 44.68 4.18
3930 16843 6.681599 GCTGAAATCCGTTTAATCGTAAACTC 59.318 38.462 5.30 0.33 44.68 3.01
3931 16844 6.540205 GCTGAAATCCGTTTAATCGTAAACT 58.460 36.000 5.30 0.00 44.68 2.66
3932 16845 5.446899 CGCTGAAATCCGTTTAATCGTAAAC 59.553 40.000 5.30 0.26 43.82 2.01
3962 16875 4.381411 GCCACTTAGGTGAGATCCAATAC 58.619 47.826 6.55 0.00 45.61 1.89
3963 16876 3.391296 GGCCACTTAGGTGAGATCCAATA 59.609 47.826 6.55 0.00 45.61 1.90
3973 16892 4.796495 GGGCCGGCCACTTAGGTG 62.796 72.222 44.46 0.00 42.65 4.00
4039 16958 4.113815 TCCCCCATGCTGCCGAAG 62.114 66.667 0.00 0.00 0.00 3.79
4040 16959 4.113815 CTCCCCCATGCTGCCGAA 62.114 66.667 0.00 0.00 0.00 4.30
4043 16962 4.512914 GTCCTCCCCCATGCTGCC 62.513 72.222 0.00 0.00 0.00 4.85
4046 16965 3.415087 GCAGTCCTCCCCCATGCT 61.415 66.667 0.00 0.00 34.10 3.79
4069 16988 4.111053 GAAGGGGGCGAAGGGGAC 62.111 72.222 0.00 0.00 0.00 4.46
4074 16993 4.162690 CCGGAGAAGGGGGCGAAG 62.163 72.222 0.00 0.00 0.00 3.79
4101 17024 3.068691 CGACGAGAGAAGGGGGCA 61.069 66.667 0.00 0.00 0.00 5.36
4121 17044 2.711311 CATCTTCCCGTGCGCATG 59.289 61.111 22.83 22.83 0.00 4.06
4160 17083 9.806203 CACCATATGATTCTCATCTTATCTCTC 57.194 37.037 3.65 0.00 38.26 3.20
4161 17084 9.324008 ACACCATATGATTCTCATCTTATCTCT 57.676 33.333 3.65 0.00 38.26 3.10
4162 17085 9.585099 GACACCATATGATTCTCATCTTATCTC 57.415 37.037 3.65 0.00 38.26 2.75
4168 17091 9.668497 CATATTGACACCATATGATTCTCATCT 57.332 33.333 3.65 0.00 38.26 2.90
4169 17092 8.396390 GCATATTGACACCATATGATTCTCATC 58.604 37.037 3.65 0.00 38.26 2.92
4170 17093 7.065443 CGCATATTGACACCATATGATTCTCAT 59.935 37.037 3.65 0.00 40.72 2.90
4171 17094 6.369615 CGCATATTGACACCATATGATTCTCA 59.630 38.462 3.65 0.00 31.74 3.27
4172 17095 6.183360 CCGCATATTGACACCATATGATTCTC 60.183 42.308 3.65 0.00 31.74 2.87
4173 17096 5.645067 CCGCATATTGACACCATATGATTCT 59.355 40.000 3.65 0.00 31.74 2.40
4174 17097 5.412594 ACCGCATATTGACACCATATGATTC 59.587 40.000 3.65 0.00 31.74 2.52
4175 17098 5.316167 ACCGCATATTGACACCATATGATT 58.684 37.500 3.65 0.00 31.74 2.57
4176 17099 4.910195 ACCGCATATTGACACCATATGAT 58.090 39.130 3.65 0.00 31.74 2.45
4177 17100 4.314961 GACCGCATATTGACACCATATGA 58.685 43.478 3.65 0.00 31.74 2.15
4178 17101 3.436704 GGACCGCATATTGACACCATATG 59.563 47.826 0.00 0.00 0.00 1.78
4179 17102 3.327757 AGGACCGCATATTGACACCATAT 59.672 43.478 0.00 0.00 0.00 1.78
4180 17103 2.703536 AGGACCGCATATTGACACCATA 59.296 45.455 0.00 0.00 0.00 2.74
4181 17104 1.490490 AGGACCGCATATTGACACCAT 59.510 47.619 0.00 0.00 0.00 3.55
4182 17105 0.908910 AGGACCGCATATTGACACCA 59.091 50.000 0.00 0.00 0.00 4.17
4183 17106 1.134521 TCAGGACCGCATATTGACACC 60.135 52.381 0.00 0.00 0.00 4.16
4184 17107 2.309528 TCAGGACCGCATATTGACAC 57.690 50.000 0.00 0.00 0.00 3.67
4185 17108 2.027653 TGTTCAGGACCGCATATTGACA 60.028 45.455 0.00 0.00 0.00 3.58
4186 17109 2.609459 CTGTTCAGGACCGCATATTGAC 59.391 50.000 0.00 0.00 0.00 3.18
4187 17110 2.419990 CCTGTTCAGGACCGCATATTGA 60.420 50.000 13.02 0.00 0.00 2.57
4188 17111 1.942657 CCTGTTCAGGACCGCATATTG 59.057 52.381 13.02 0.00 0.00 1.90
4189 17112 1.747206 GCCTGTTCAGGACCGCATATT 60.747 52.381 21.32 0.00 0.00 1.28
4190 17113 0.179045 GCCTGTTCAGGACCGCATAT 60.179 55.000 21.32 0.00 0.00 1.78
4191 17114 1.220749 GCCTGTTCAGGACCGCATA 59.779 57.895 21.32 0.00 0.00 3.14
4192 17115 2.045926 GCCTGTTCAGGACCGCAT 60.046 61.111 21.32 0.00 0.00 4.73
4193 17116 4.329545 GGCCTGTTCAGGACCGCA 62.330 66.667 21.32 0.00 0.00 5.69
4197 17120 1.198759 TAGTGGGGCCTGTTCAGGAC 61.199 60.000 21.32 18.63 35.83 3.85
4198 17121 0.253160 ATAGTGGGGCCTGTTCAGGA 60.253 55.000 21.32 0.25 0.00 3.86
4199 17122 1.417890 CTATAGTGGGGCCTGTTCAGG 59.582 57.143 13.88 13.88 0.00 3.86
4200 17123 1.417890 CCTATAGTGGGGCCTGTTCAG 59.582 57.143 0.84 0.00 0.00 3.02
4201 17124 1.009060 TCCTATAGTGGGGCCTGTTCA 59.991 52.381 0.84 0.00 0.00 3.18
4202 17125 1.416772 GTCCTATAGTGGGGCCTGTTC 59.583 57.143 0.84 0.00 0.00 3.18
4203 17126 1.274184 TGTCCTATAGTGGGGCCTGTT 60.274 52.381 0.84 0.00 0.00 3.16
4204 17127 0.341961 TGTCCTATAGTGGGGCCTGT 59.658 55.000 0.84 0.00 0.00 4.00
4205 17128 1.507140 TTGTCCTATAGTGGGGCCTG 58.493 55.000 0.84 0.00 0.00 4.85
4206 17129 2.514726 ATTGTCCTATAGTGGGGCCT 57.485 50.000 0.84 0.00 0.00 5.19
4207 17130 3.651423 ACTAATTGTCCTATAGTGGGGCC 59.349 47.826 0.00 0.00 0.00 5.80
4208 17131 4.976540 ACTAATTGTCCTATAGTGGGGC 57.023 45.455 0.00 0.00 0.00 5.80
4209 17132 5.531287 GCAAACTAATTGTCCTATAGTGGGG 59.469 44.000 0.00 0.00 41.32 4.96
4210 17133 6.119536 TGCAAACTAATTGTCCTATAGTGGG 58.880 40.000 0.00 0.00 41.32 4.61
4211 17134 6.260936 CCTGCAAACTAATTGTCCTATAGTGG 59.739 42.308 0.00 0.00 41.32 4.00
4212 17135 7.047891 TCCTGCAAACTAATTGTCCTATAGTG 58.952 38.462 0.00 0.00 41.32 2.74
4213 17136 7.195374 TCCTGCAAACTAATTGTCCTATAGT 57.805 36.000 0.00 0.00 41.32 2.12
4214 17137 7.173907 CCATCCTGCAAACTAATTGTCCTATAG 59.826 40.741 0.00 0.00 41.32 1.31
4215 17138 6.998074 CCATCCTGCAAACTAATTGTCCTATA 59.002 38.462 0.00 0.00 41.32 1.31
4216 17139 5.829924 CCATCCTGCAAACTAATTGTCCTAT 59.170 40.000 0.00 0.00 41.32 2.57
4217 17140 5.192927 CCATCCTGCAAACTAATTGTCCTA 58.807 41.667 0.00 0.00 41.32 2.94
4218 17141 4.019174 CCATCCTGCAAACTAATTGTCCT 58.981 43.478 0.00 0.00 41.32 3.85
4219 17142 3.131046 CCCATCCTGCAAACTAATTGTCC 59.869 47.826 0.00 0.00 41.32 4.02
4220 17143 3.429410 GCCCATCCTGCAAACTAATTGTC 60.429 47.826 0.00 0.00 41.32 3.18
4221 17144 2.497273 GCCCATCCTGCAAACTAATTGT 59.503 45.455 0.00 0.00 41.32 2.71
4222 17145 2.762327 AGCCCATCCTGCAAACTAATTG 59.238 45.455 0.00 0.00 42.21 2.32
4223 17146 3.105959 AGCCCATCCTGCAAACTAATT 57.894 42.857 0.00 0.00 0.00 1.40
4224 17147 2.834638 AGCCCATCCTGCAAACTAAT 57.165 45.000 0.00 0.00 0.00 1.73
4225 17148 2.603075 AAGCCCATCCTGCAAACTAA 57.397 45.000 0.00 0.00 0.00 2.24
4226 17149 2.603075 AAAGCCCATCCTGCAAACTA 57.397 45.000 0.00 0.00 0.00 2.24
4227 17150 2.450476 CTAAAGCCCATCCTGCAAACT 58.550 47.619 0.00 0.00 0.00 2.66
4228 17151 1.134995 GCTAAAGCCCATCCTGCAAAC 60.135 52.381 0.00 0.00 34.31 2.93
4229 17152 1.185315 GCTAAAGCCCATCCTGCAAA 58.815 50.000 0.00 0.00 34.31 3.68
4230 17153 0.332632 AGCTAAAGCCCATCCTGCAA 59.667 50.000 0.00 0.00 43.38 4.08
4231 17154 0.332632 AAGCTAAAGCCCATCCTGCA 59.667 50.000 0.00 0.00 43.38 4.41
4232 17155 1.478631 AAAGCTAAAGCCCATCCTGC 58.521 50.000 0.00 0.00 43.38 4.85
4233 17156 3.633986 CCTAAAAGCTAAAGCCCATCCTG 59.366 47.826 0.00 0.00 43.38 3.86
4234 17157 3.373110 CCCTAAAAGCTAAAGCCCATCCT 60.373 47.826 0.00 0.00 43.38 3.24
4235 17158 2.959030 CCCTAAAAGCTAAAGCCCATCC 59.041 50.000 0.00 0.00 43.38 3.51
4236 17159 2.362397 GCCCTAAAAGCTAAAGCCCATC 59.638 50.000 0.00 0.00 43.38 3.51
4237 17160 2.388735 GCCCTAAAAGCTAAAGCCCAT 58.611 47.619 0.00 0.00 43.38 4.00
4238 17161 1.618616 GGCCCTAAAAGCTAAAGCCCA 60.619 52.381 0.00 0.00 43.38 5.36
4239 17162 1.112113 GGCCCTAAAAGCTAAAGCCC 58.888 55.000 0.00 0.00 43.38 5.19
4240 17163 1.751351 CTGGCCCTAAAAGCTAAAGCC 59.249 52.381 0.00 0.00 43.38 4.35
4241 17164 2.447443 ACTGGCCCTAAAAGCTAAAGC 58.553 47.619 0.00 0.00 42.49 3.51
4242 17165 3.826729 ACAACTGGCCCTAAAAGCTAAAG 59.173 43.478 0.00 0.00 0.00 1.85
4243 17166 3.839778 ACAACTGGCCCTAAAAGCTAAA 58.160 40.909 0.00 0.00 0.00 1.85
4244 17167 3.518992 ACAACTGGCCCTAAAAGCTAA 57.481 42.857 0.00 0.00 0.00 3.09
4245 17168 3.518992 AACAACTGGCCCTAAAAGCTA 57.481 42.857 0.00 0.00 0.00 3.32
4246 17169 2.381752 AACAACTGGCCCTAAAAGCT 57.618 45.000 0.00 0.00 0.00 3.74
4247 17170 3.469008 AAAACAACTGGCCCTAAAAGC 57.531 42.857 0.00 0.00 0.00 3.51
4248 17171 5.508994 CCTGTAAAACAACTGGCCCTAAAAG 60.509 44.000 0.00 0.00 32.56 2.27
4249 17172 4.342665 CCTGTAAAACAACTGGCCCTAAAA 59.657 41.667 0.00 0.00 32.56 1.52
4250 17173 3.892588 CCTGTAAAACAACTGGCCCTAAA 59.107 43.478 0.00 0.00 32.56 1.85
4251 17174 3.138653 TCCTGTAAAACAACTGGCCCTAA 59.861 43.478 0.00 0.00 38.12 2.69
4252 17175 2.712087 TCCTGTAAAACAACTGGCCCTA 59.288 45.455 0.00 0.00 38.12 3.53
4253 17176 1.497286 TCCTGTAAAACAACTGGCCCT 59.503 47.619 0.00 0.00 38.12 5.19
4254 17177 1.989706 TCCTGTAAAACAACTGGCCC 58.010 50.000 0.00 0.00 38.12 5.80
4255 17178 2.890945 ACATCCTGTAAAACAACTGGCC 59.109 45.455 0.00 0.00 38.12 5.36
4256 17179 3.057526 GGACATCCTGTAAAACAACTGGC 60.058 47.826 0.00 0.00 38.12 4.85
4257 17180 4.141287 TGGACATCCTGTAAAACAACTGG 58.859 43.478 0.00 0.00 39.23 4.00
4258 17181 4.320494 GCTGGACATCCTGTAAAACAACTG 60.320 45.833 6.66 0.00 37.30 3.16
4259 17182 3.821033 GCTGGACATCCTGTAAAACAACT 59.179 43.478 6.66 0.00 37.30 3.16
4260 17183 3.821033 AGCTGGACATCCTGTAAAACAAC 59.179 43.478 6.66 0.00 37.30 3.32
4261 17184 4.098914 AGCTGGACATCCTGTAAAACAA 57.901 40.909 6.66 0.00 37.30 2.83
4262 17185 3.788227 AGCTGGACATCCTGTAAAACA 57.212 42.857 6.66 0.00 37.30 2.83
4263 17186 6.759497 AATAAGCTGGACATCCTGTAAAAC 57.241 37.500 6.66 0.00 37.30 2.43
4264 17187 7.775053 AAAATAAGCTGGACATCCTGTAAAA 57.225 32.000 6.66 0.00 37.30 1.52
4265 17188 7.775053 AAAAATAAGCTGGACATCCTGTAAA 57.225 32.000 6.66 0.00 37.30 2.01
4287 17210 8.633561 CCAAATAAATTTTGGTTGGGCTTAAAA 58.366 29.630 14.80 0.00 42.92 1.52
4288 17211 7.998964 TCCAAATAAATTTTGGTTGGGCTTAAA 59.001 29.630 19.25 4.69 46.75 1.52
4289 17212 7.518188 TCCAAATAAATTTTGGTTGGGCTTAA 58.482 30.769 19.25 5.18 46.75 1.85
4290 17213 7.016661 TCTCCAAATAAATTTTGGTTGGGCTTA 59.983 33.333 19.25 6.71 46.75 3.09
4291 17214 5.946486 TCCAAATAAATTTTGGTTGGGCTT 58.054 33.333 19.25 0.00 46.75 4.35
4292 17215 5.309282 TCTCCAAATAAATTTTGGTTGGGCT 59.691 36.000 19.25 0.00 46.75 5.19
4293 17216 5.555966 TCTCCAAATAAATTTTGGTTGGGC 58.444 37.500 19.25 0.00 46.75 5.36
4294 17217 6.149308 GCTTCTCCAAATAAATTTTGGTTGGG 59.851 38.462 19.25 10.58 46.75 4.12
4295 17218 6.149308 GGCTTCTCCAAATAAATTTTGGTTGG 59.851 38.462 14.82 15.82 46.75 3.77
4296 17219 6.936335 AGGCTTCTCCAAATAAATTTTGGTTG 59.064 34.615 14.82 10.23 46.75 3.77
4297 17220 7.078249 AGGCTTCTCCAAATAAATTTTGGTT 57.922 32.000 14.82 0.00 46.75 3.67
4298 17221 6.686484 AGGCTTCTCCAAATAAATTTTGGT 57.314 33.333 14.82 0.00 46.75 3.67
4300 17223 9.101655 CCATTAGGCTTCTCCAAATAAATTTTG 57.898 33.333 0.00 0.00 37.29 2.44
4301 17224 8.825774 ACCATTAGGCTTCTCCAAATAAATTTT 58.174 29.630 0.00 0.00 39.06 1.82
4302 17225 8.379428 ACCATTAGGCTTCTCCAAATAAATTT 57.621 30.769 0.00 0.00 39.06 1.82
4303 17226 7.978099 ACCATTAGGCTTCTCCAAATAAATT 57.022 32.000 0.00 0.00 39.06 1.82
4304 17227 7.978099 AACCATTAGGCTTCTCCAAATAAAT 57.022 32.000 0.00 0.00 39.06 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.