Multiple sequence alignment - TraesCS7D01G050200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G050200 chr7D 100.000 3263 0 0 1 3263 25791060 25787798 0.000000e+00 6026.0
1 TraesCS7D01G050200 chr7D 87.121 1087 84 26 2207 3263 25772114 25771054 0.000000e+00 1181.0
2 TraesCS7D01G050200 chr7D 92.683 41 3 0 46 86 76927148 76927108 3.520000e-05 60.2
3 TraesCS7D01G050200 chr7A 87.899 1975 141 49 1301 3229 26724339 26722417 0.000000e+00 2233.0
4 TraesCS7D01G050200 chr7A 89.905 525 36 9 709 1222 26724891 26724373 0.000000e+00 660.0
5 TraesCS7D01G050200 chr7A 94.872 117 5 1 62 178 26735312 26735197 7.190000e-42 182.0
6 TraesCS7D01G050200 chr7A 96.053 76 3 0 1 76 26735402 26735327 1.230000e-24 124.0
7 TraesCS7D01G050200 chr7A 74.699 249 46 11 48 293 415176467 415176233 9.640000e-16 95.3
8 TraesCS7D01G050200 chr7A 82.927 82 13 1 221 302 468954635 468954555 4.520000e-09 73.1
9 TraesCS7D01G050200 chr4A 88.889 954 68 14 2334 3263 710205978 710205039 0.000000e+00 1140.0
10 TraesCS7D01G050200 chr4A 86.541 743 73 7 2163 2891 710204815 710204086 0.000000e+00 793.0
11 TraesCS7D01G050200 chr4A 90.667 525 33 5 1292 1812 710211242 710210730 0.000000e+00 684.0
12 TraesCS7D01G050200 chr4A 88.395 517 32 17 753 1249 710211755 710211247 6.030000e-167 597.0
13 TraesCS7D01G050200 chr4A 83.594 384 22 7 1917 2287 710210699 710210344 4.060000e-84 322.0
14 TraesCS7D01G050200 chr4A 90.476 84 8 0 3180 3263 710204054 710203971 9.570000e-21 111.0
15 TraesCS7D01G050200 chr6A 88.750 80 9 0 2925 3004 615619038 615618959 7.450000e-17 99.0
16 TraesCS7D01G050200 chr6A 88.889 45 4 1 439 482 452780516 452780560 2.000000e-03 54.7
17 TraesCS7D01G050200 chr2D 100.000 35 0 0 48 82 611899644 611899610 7.560000e-07 65.8
18 TraesCS7D01G050200 chr2D 97.222 36 1 0 537 572 505732505 505732540 9.780000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G050200 chr7D 25787798 25791060 3262 True 6026.000000 6026 100.000000 1 3263 1 chr7D.!!$R2 3262
1 TraesCS7D01G050200 chr7D 25771054 25772114 1060 True 1181.000000 1181 87.121000 2207 3263 1 chr7D.!!$R1 1056
2 TraesCS7D01G050200 chr7A 26722417 26724891 2474 True 1446.500000 2233 88.902000 709 3229 2 chr7A.!!$R3 2520
3 TraesCS7D01G050200 chr4A 710203971 710205978 2007 True 681.333333 1140 88.635333 2163 3263 3 chr4A.!!$R1 1100
4 TraesCS7D01G050200 chr4A 710210344 710211755 1411 True 534.333333 684 87.552000 753 2287 3 chr4A.!!$R2 1534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 382 0.036875 AAAAGGAGCCCGGAAGAGTG 59.963 55.0 0.73 0.0 0.00 3.51 F
463 464 0.037326 AGAATGTGCTTCTCGCGGAA 60.037 50.0 6.13 8.1 40.26 4.30 F
1824 1862 0.107066 TGCATCGAGGCCATCACATT 60.107 50.0 20.64 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 1800 0.107848 ATGTACCGTACCTTGGCTGC 60.108 55.0 6.23 0.00 0.0 5.25 R
1841 1879 0.249447 TGCAGTCGACACTCAACAGG 60.249 55.0 19.50 0.00 0.0 4.00 R
3003 4436 0.038343 GACAACAATGGCGTGGCATT 60.038 50.0 15.06 15.06 0.0 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.622064 CCAAGCGCTAATTAGGACCT 57.378 50.000 12.05 0.00 0.00 3.85
20 21 2.484889 CCAAGCGCTAATTAGGACCTC 58.515 52.381 12.05 0.00 0.00 3.85
21 22 2.103263 CCAAGCGCTAATTAGGACCTCT 59.897 50.000 12.05 0.00 0.00 3.69
22 23 3.385577 CAAGCGCTAATTAGGACCTCTC 58.614 50.000 12.05 0.00 0.00 3.20
23 24 2.952116 AGCGCTAATTAGGACCTCTCT 58.048 47.619 8.99 0.00 0.00 3.10
24 25 4.101645 AGCGCTAATTAGGACCTCTCTA 57.898 45.455 8.99 0.00 0.00 2.43
25 26 4.076394 AGCGCTAATTAGGACCTCTCTAG 58.924 47.826 8.99 0.00 0.00 2.43
26 27 4.073549 GCGCTAATTAGGACCTCTCTAGA 58.926 47.826 14.28 0.00 0.00 2.43
27 28 4.519730 GCGCTAATTAGGACCTCTCTAGAA 59.480 45.833 14.28 0.00 0.00 2.10
28 29 5.009811 GCGCTAATTAGGACCTCTCTAGAAA 59.990 44.000 14.28 0.00 0.00 2.52
29 30 6.674066 CGCTAATTAGGACCTCTCTAGAAAG 58.326 44.000 14.28 0.00 0.00 2.62
30 31 6.487331 CGCTAATTAGGACCTCTCTAGAAAGA 59.513 42.308 14.28 0.00 0.00 2.52
31 32 7.175990 CGCTAATTAGGACCTCTCTAGAAAGAT 59.824 40.741 14.28 0.00 0.00 2.40
32 33 8.866093 GCTAATTAGGACCTCTCTAGAAAGATT 58.134 37.037 14.28 0.00 0.00 2.40
34 35 8.616799 AATTAGGACCTCTCTAGAAAGATTGT 57.383 34.615 0.00 0.00 0.00 2.71
35 36 9.716556 AATTAGGACCTCTCTAGAAAGATTGTA 57.283 33.333 0.00 0.00 0.00 2.41
36 37 8.522542 TTAGGACCTCTCTAGAAAGATTGTAC 57.477 38.462 0.00 0.00 0.00 2.90
37 38 5.591067 AGGACCTCTCTAGAAAGATTGTACG 59.409 44.000 0.00 0.00 0.00 3.67
38 39 5.589452 GGACCTCTCTAGAAAGATTGTACGA 59.411 44.000 0.00 0.00 0.00 3.43
39 40 6.095160 GGACCTCTCTAGAAAGATTGTACGAA 59.905 42.308 0.00 0.00 0.00 3.85
40 41 7.362747 GGACCTCTCTAGAAAGATTGTACGAAA 60.363 40.741 0.00 0.00 0.00 3.46
41 42 8.068892 ACCTCTCTAGAAAGATTGTACGAAAT 57.931 34.615 0.00 0.00 0.00 2.17
42 43 8.192110 ACCTCTCTAGAAAGATTGTACGAAATC 58.808 37.037 0.00 0.00 36.91 2.17
43 44 8.191446 CCTCTCTAGAAAGATTGTACGAAATCA 58.809 37.037 8.24 0.00 38.74 2.57
44 45 9.232082 CTCTCTAGAAAGATTGTACGAAATCAG 57.768 37.037 8.24 0.00 38.74 2.90
45 46 7.702772 TCTCTAGAAAGATTGTACGAAATCAGC 59.297 37.037 8.24 0.00 38.74 4.26
46 47 5.803020 AGAAAGATTGTACGAAATCAGCC 57.197 39.130 8.24 0.00 38.74 4.85
47 48 5.245531 AGAAAGATTGTACGAAATCAGCCA 58.754 37.500 8.24 0.00 38.74 4.75
48 49 5.705441 AGAAAGATTGTACGAAATCAGCCAA 59.295 36.000 8.24 0.00 38.74 4.52
49 50 5.957842 AAGATTGTACGAAATCAGCCAAA 57.042 34.783 8.24 0.00 38.74 3.28
50 51 6.515272 AAGATTGTACGAAATCAGCCAAAT 57.485 33.333 8.24 0.00 38.74 2.32
51 52 6.124088 AGATTGTACGAAATCAGCCAAATC 57.876 37.500 8.24 0.00 38.74 2.17
52 53 5.647658 AGATTGTACGAAATCAGCCAAATCA 59.352 36.000 8.24 0.00 38.74 2.57
53 54 4.678509 TGTACGAAATCAGCCAAATCAC 57.321 40.909 0.00 0.00 0.00 3.06
54 55 4.323417 TGTACGAAATCAGCCAAATCACT 58.677 39.130 0.00 0.00 0.00 3.41
55 56 5.483811 TGTACGAAATCAGCCAAATCACTA 58.516 37.500 0.00 0.00 0.00 2.74
56 57 5.580691 TGTACGAAATCAGCCAAATCACTAG 59.419 40.000 0.00 0.00 0.00 2.57
57 58 4.579869 ACGAAATCAGCCAAATCACTAGT 58.420 39.130 0.00 0.00 0.00 2.57
58 59 5.003804 ACGAAATCAGCCAAATCACTAGTT 58.996 37.500 0.00 0.00 0.00 2.24
59 60 6.170506 ACGAAATCAGCCAAATCACTAGTTA 58.829 36.000 0.00 0.00 0.00 2.24
60 61 6.653320 ACGAAATCAGCCAAATCACTAGTTAA 59.347 34.615 0.00 0.00 0.00 2.01
61 62 7.148407 ACGAAATCAGCCAAATCACTAGTTAAG 60.148 37.037 0.00 0.00 0.00 1.85
62 63 7.396540 AAATCAGCCAAATCACTAGTTAAGG 57.603 36.000 0.00 0.00 0.00 2.69
63 64 4.843728 TCAGCCAAATCACTAGTTAAGGG 58.156 43.478 0.00 0.00 0.00 3.95
64 65 4.288626 TCAGCCAAATCACTAGTTAAGGGT 59.711 41.667 0.00 0.00 0.00 4.34
65 66 5.010282 CAGCCAAATCACTAGTTAAGGGTT 58.990 41.667 0.00 0.00 0.00 4.11
66 67 6.013206 TCAGCCAAATCACTAGTTAAGGGTTA 60.013 38.462 0.00 0.00 0.00 2.85
67 68 6.093633 CAGCCAAATCACTAGTTAAGGGTTAC 59.906 42.308 0.00 0.00 0.00 2.50
68 69 5.356190 GCCAAATCACTAGTTAAGGGTTACC 59.644 44.000 0.00 0.00 0.00 2.85
69 70 5.884232 CCAAATCACTAGTTAAGGGTTACCC 59.116 44.000 13.56 13.56 45.90 3.69
93 94 5.541845 CTTGTAAAGGTCACTCATCAGTCA 58.458 41.667 0.00 0.00 41.27 3.41
94 95 5.745312 TGTAAAGGTCACTCATCAGTCAT 57.255 39.130 0.00 0.00 0.00 3.06
95 96 5.724328 TGTAAAGGTCACTCATCAGTCATC 58.276 41.667 0.00 0.00 0.00 2.92
96 97 4.897509 AAAGGTCACTCATCAGTCATCA 57.102 40.909 0.00 0.00 0.00 3.07
97 98 3.883830 AGGTCACTCATCAGTCATCAC 57.116 47.619 0.00 0.00 0.00 3.06
98 99 2.499289 AGGTCACTCATCAGTCATCACC 59.501 50.000 0.00 0.00 0.00 4.02
99 100 2.499289 GGTCACTCATCAGTCATCACCT 59.501 50.000 0.00 0.00 0.00 4.00
100 101 3.055530 GGTCACTCATCAGTCATCACCTT 60.056 47.826 0.00 0.00 0.00 3.50
101 102 4.180057 GTCACTCATCAGTCATCACCTTC 58.820 47.826 0.00 0.00 0.00 3.46
102 103 4.081752 GTCACTCATCAGTCATCACCTTCT 60.082 45.833 0.00 0.00 0.00 2.85
103 104 4.159321 TCACTCATCAGTCATCACCTTCTC 59.841 45.833 0.00 0.00 0.00 2.87
104 105 3.450457 ACTCATCAGTCATCACCTTCTCC 59.550 47.826 0.00 0.00 0.00 3.71
105 106 3.444029 TCATCAGTCATCACCTTCTCCA 58.556 45.455 0.00 0.00 0.00 3.86
106 107 3.450096 TCATCAGTCATCACCTTCTCCAG 59.550 47.826 0.00 0.00 0.00 3.86
107 108 1.552337 TCAGTCATCACCTTCTCCAGC 59.448 52.381 0.00 0.00 0.00 4.85
108 109 0.534412 AGTCATCACCTTCTCCAGCG 59.466 55.000 0.00 0.00 0.00 5.18
109 110 1.086634 GTCATCACCTTCTCCAGCGC 61.087 60.000 0.00 0.00 0.00 5.92
110 111 1.220206 CATCACCTTCTCCAGCGCT 59.780 57.895 2.64 2.64 0.00 5.92
111 112 1.088340 CATCACCTTCTCCAGCGCTG 61.088 60.000 30.52 30.52 0.00 5.18
112 113 1.260538 ATCACCTTCTCCAGCGCTGA 61.261 55.000 38.06 22.07 0.00 4.26
113 114 1.739562 CACCTTCTCCAGCGCTGAC 60.740 63.158 38.06 0.00 0.00 3.51
114 115 2.210013 ACCTTCTCCAGCGCTGACA 61.210 57.895 38.06 22.34 0.00 3.58
115 116 1.004560 CCTTCTCCAGCGCTGACAA 60.005 57.895 38.06 23.68 0.00 3.18
116 117 0.392193 CCTTCTCCAGCGCTGACAAT 60.392 55.000 38.06 0.00 0.00 2.71
117 118 1.446907 CTTCTCCAGCGCTGACAATT 58.553 50.000 38.06 0.00 0.00 2.32
118 119 1.129998 CTTCTCCAGCGCTGACAATTG 59.870 52.381 38.06 20.11 0.00 2.32
119 120 0.674581 TCTCCAGCGCTGACAATTGG 60.675 55.000 38.06 20.76 0.00 3.16
120 121 2.180017 CCAGCGCTGACAATTGGC 59.820 61.111 38.06 7.53 0.00 4.52
121 122 2.180017 CAGCGCTGACAATTGGCC 59.820 61.111 33.66 0.00 0.00 5.36
122 123 3.064324 AGCGCTGACAATTGGCCC 61.064 61.111 10.39 0.00 0.00 5.80
123 124 3.372730 GCGCTGACAATTGGCCCA 61.373 61.111 9.30 3.17 0.00 5.36
124 125 2.568090 CGCTGACAATTGGCCCAC 59.432 61.111 9.30 0.00 0.00 4.61
125 126 2.973082 GCTGACAATTGGCCCACC 59.027 61.111 9.30 0.00 0.00 4.61
126 127 2.649129 GCTGACAATTGGCCCACCC 61.649 63.158 9.30 0.00 33.59 4.61
127 128 1.984026 CTGACAATTGGCCCACCCC 60.984 63.158 9.30 0.00 33.59 4.95
128 129 3.068064 GACAATTGGCCCACCCCG 61.068 66.667 10.83 0.00 33.59 5.73
129 130 3.879180 GACAATTGGCCCACCCCGT 62.879 63.158 10.83 0.00 33.59 5.28
130 131 3.381136 CAATTGGCCCACCCCGTG 61.381 66.667 0.00 0.00 33.59 4.94
131 132 3.909651 AATTGGCCCACCCCGTGT 61.910 61.111 0.00 0.00 33.59 4.49
132 133 4.676951 ATTGGCCCACCCCGTGTG 62.677 66.667 0.00 0.00 45.01 3.82
147 148 4.921847 GTGCGCCGCTTGTTGCAA 62.922 61.111 11.67 0.00 43.06 4.08
148 149 4.921847 TGCGCCGCTTGTTGCAAC 62.922 61.111 22.83 22.83 43.06 4.17
149 150 4.629115 GCGCCGCTTGTTGCAACT 62.629 61.111 28.61 0.00 43.06 3.16
150 151 2.026014 CGCCGCTTGTTGCAACTT 59.974 55.556 28.61 0.00 43.06 2.66
151 152 2.295052 CGCCGCTTGTTGCAACTTG 61.295 57.895 28.61 21.02 43.06 3.16
152 153 1.950630 GCCGCTTGTTGCAACTTGG 60.951 57.895 28.61 23.09 43.06 3.61
153 154 1.437160 CCGCTTGTTGCAACTTGGT 59.563 52.632 28.61 0.00 43.06 3.67
154 155 0.665835 CCGCTTGTTGCAACTTGGTA 59.334 50.000 28.61 6.80 43.06 3.25
155 156 1.066303 CCGCTTGTTGCAACTTGGTAA 59.934 47.619 28.61 14.12 43.06 2.85
156 157 2.288152 CCGCTTGTTGCAACTTGGTAAT 60.288 45.455 28.61 0.00 43.06 1.89
157 158 3.380142 CGCTTGTTGCAACTTGGTAATT 58.620 40.909 28.61 0.00 43.06 1.40
158 159 3.801594 CGCTTGTTGCAACTTGGTAATTT 59.198 39.130 28.61 0.00 43.06 1.82
159 160 4.269844 CGCTTGTTGCAACTTGGTAATTTT 59.730 37.500 28.61 0.00 43.06 1.82
160 161 5.556194 CGCTTGTTGCAACTTGGTAATTTTC 60.556 40.000 28.61 0.00 43.06 2.29
161 162 5.277297 GCTTGTTGCAACTTGGTAATTTTCC 60.277 40.000 28.61 0.00 42.31 3.13
162 163 5.606348 TGTTGCAACTTGGTAATTTTCCT 57.394 34.783 28.61 0.00 0.00 3.36
163 164 5.983540 TGTTGCAACTTGGTAATTTTCCTT 58.016 33.333 28.61 0.00 0.00 3.36
164 165 6.410540 TGTTGCAACTTGGTAATTTTCCTTT 58.589 32.000 28.61 0.00 0.00 3.11
165 166 6.881602 TGTTGCAACTTGGTAATTTTCCTTTT 59.118 30.769 28.61 0.00 0.00 2.27
166 167 7.391833 TGTTGCAACTTGGTAATTTTCCTTTTT 59.608 29.630 28.61 0.00 0.00 1.94
212 213 8.140677 ACATTTTATGTTTTGAACCATGTGTG 57.859 30.769 0.00 0.00 41.63 3.82
213 214 7.226325 ACATTTTATGTTTTGAACCATGTGTGG 59.774 33.333 0.00 0.00 45.91 4.17
229 230 7.727331 CATGTGTGGAATACAAAACCATTTT 57.273 32.000 0.00 0.00 42.67 1.82
242 243 6.712179 AAAACCATTTTGACCATTGCATTT 57.288 29.167 0.00 0.00 0.00 2.32
243 244 5.945466 AACCATTTTGACCATTGCATTTC 57.055 34.783 0.00 0.00 0.00 2.17
244 245 5.231702 ACCATTTTGACCATTGCATTTCT 57.768 34.783 0.00 0.00 0.00 2.52
245 246 5.623169 ACCATTTTGACCATTGCATTTCTT 58.377 33.333 0.00 0.00 0.00 2.52
246 247 5.470777 ACCATTTTGACCATTGCATTTCTTG 59.529 36.000 0.00 0.00 0.00 3.02
257 258 2.559440 GCATTTCTTGCCTCGAGATCT 58.441 47.619 15.71 0.00 46.15 2.75
258 259 2.941720 GCATTTCTTGCCTCGAGATCTT 59.058 45.455 15.71 0.00 46.15 2.40
259 260 3.376546 GCATTTCTTGCCTCGAGATCTTT 59.623 43.478 15.71 0.00 46.15 2.52
260 261 4.730035 GCATTTCTTGCCTCGAGATCTTTG 60.730 45.833 15.71 0.00 46.15 2.77
261 262 3.961480 TTCTTGCCTCGAGATCTTTGA 57.039 42.857 15.71 1.45 0.00 2.69
262 263 3.961480 TCTTGCCTCGAGATCTTTGAA 57.039 42.857 15.71 0.00 0.00 2.69
263 264 4.271696 TCTTGCCTCGAGATCTTTGAAA 57.728 40.909 15.71 0.00 0.00 2.69
264 265 3.997021 TCTTGCCTCGAGATCTTTGAAAC 59.003 43.478 15.71 0.00 0.00 2.78
265 266 3.685139 TGCCTCGAGATCTTTGAAACT 57.315 42.857 15.71 0.00 0.00 2.66
266 267 4.801330 TGCCTCGAGATCTTTGAAACTA 57.199 40.909 15.71 0.00 0.00 2.24
267 268 4.748892 TGCCTCGAGATCTTTGAAACTAG 58.251 43.478 15.71 0.00 0.00 2.57
268 269 4.462834 TGCCTCGAGATCTTTGAAACTAGA 59.537 41.667 15.71 0.00 0.00 2.43
269 270 5.127845 TGCCTCGAGATCTTTGAAACTAGAT 59.872 40.000 15.71 0.00 33.92 1.98
270 271 5.689961 GCCTCGAGATCTTTGAAACTAGATC 59.310 44.000 15.71 0.00 44.54 2.75
271 272 6.212955 CCTCGAGATCTTTGAAACTAGATCC 58.787 44.000 15.71 1.33 45.05 3.36
272 273 6.150396 TCGAGATCTTTGAAACTAGATCCC 57.850 41.667 0.00 0.00 45.05 3.85
273 274 4.979197 CGAGATCTTTGAAACTAGATCCCG 59.021 45.833 0.00 5.33 45.05 5.14
274 275 5.450688 CGAGATCTTTGAAACTAGATCCCGT 60.451 44.000 0.00 0.00 45.05 5.28
275 276 5.665459 AGATCTTTGAAACTAGATCCCGTG 58.335 41.667 0.00 0.00 45.05 4.94
276 277 4.884668 TCTTTGAAACTAGATCCCGTGT 57.115 40.909 0.00 0.00 0.00 4.49
277 278 5.223449 TCTTTGAAACTAGATCCCGTGTT 57.777 39.130 0.00 0.00 0.00 3.32
278 279 6.349243 TCTTTGAAACTAGATCCCGTGTTA 57.651 37.500 0.00 0.00 0.00 2.41
279 280 6.761312 TCTTTGAAACTAGATCCCGTGTTAA 58.239 36.000 0.00 0.00 0.00 2.01
280 281 7.391620 TCTTTGAAACTAGATCCCGTGTTAAT 58.608 34.615 0.00 0.00 0.00 1.40
281 282 8.533657 TCTTTGAAACTAGATCCCGTGTTAATA 58.466 33.333 0.00 0.00 0.00 0.98
282 283 8.712285 TTTGAAACTAGATCCCGTGTTAATAG 57.288 34.615 0.00 0.00 0.00 1.73
283 284 6.812998 TGAAACTAGATCCCGTGTTAATAGG 58.187 40.000 0.00 0.00 0.00 2.57
284 285 6.381994 TGAAACTAGATCCCGTGTTAATAGGT 59.618 38.462 0.00 0.00 0.00 3.08
285 286 6.803366 AACTAGATCCCGTGTTAATAGGTT 57.197 37.500 0.00 0.00 0.00 3.50
286 287 6.803366 ACTAGATCCCGTGTTAATAGGTTT 57.197 37.500 0.00 0.00 0.00 3.27
287 288 6.814043 ACTAGATCCCGTGTTAATAGGTTTC 58.186 40.000 0.00 0.00 0.00 2.78
288 289 4.690122 AGATCCCGTGTTAATAGGTTTCG 58.310 43.478 0.00 0.00 0.00 3.46
289 290 4.403432 AGATCCCGTGTTAATAGGTTTCGA 59.597 41.667 0.00 0.00 0.00 3.71
290 291 3.848726 TCCCGTGTTAATAGGTTTCGAC 58.151 45.455 0.00 0.00 0.00 4.20
291 292 2.599973 CCCGTGTTAATAGGTTTCGACG 59.400 50.000 0.00 0.00 0.00 5.12
292 293 3.500982 CCGTGTTAATAGGTTTCGACGA 58.499 45.455 0.00 0.00 0.00 4.20
293 294 4.107622 CCGTGTTAATAGGTTTCGACGAT 58.892 43.478 0.00 0.00 0.00 3.73
294 295 4.563976 CCGTGTTAATAGGTTTCGACGATT 59.436 41.667 0.00 0.00 0.00 3.34
295 296 5.062558 CCGTGTTAATAGGTTTCGACGATTT 59.937 40.000 0.00 0.00 0.00 2.17
296 297 6.401367 CCGTGTTAATAGGTTTCGACGATTTT 60.401 38.462 0.00 0.00 0.00 1.82
297 298 7.011189 CGTGTTAATAGGTTTCGACGATTTTT 58.989 34.615 0.00 0.00 0.00 1.94
379 380 3.652581 AAAAAGGAGCCCGGAAGAG 57.347 52.632 0.73 0.00 0.00 2.85
380 381 0.771755 AAAAAGGAGCCCGGAAGAGT 59.228 50.000 0.73 0.00 0.00 3.24
381 382 0.036875 AAAAGGAGCCCGGAAGAGTG 59.963 55.000 0.73 0.00 0.00 3.51
382 383 1.842381 AAAGGAGCCCGGAAGAGTGG 61.842 60.000 0.73 0.00 0.00 4.00
383 384 3.003763 GGAGCCCGGAAGAGTGGT 61.004 66.667 0.73 0.00 0.00 4.16
384 385 2.593956 GGAGCCCGGAAGAGTGGTT 61.594 63.158 0.73 0.00 0.00 3.67
385 386 1.376037 GAGCCCGGAAGAGTGGTTG 60.376 63.158 0.73 0.00 0.00 3.77
386 387 3.056328 GCCCGGAAGAGTGGTTGC 61.056 66.667 0.73 0.00 0.00 4.17
387 388 2.742372 CCCGGAAGAGTGGTTGCG 60.742 66.667 0.73 0.00 40.59 4.85
389 390 2.030562 CGGAAGAGTGGTTGCGGT 59.969 61.111 0.00 0.00 37.59 5.68
390 391 1.597027 CGGAAGAGTGGTTGCGGTT 60.597 57.895 0.00 0.00 37.59 4.44
391 392 1.164041 CGGAAGAGTGGTTGCGGTTT 61.164 55.000 0.00 0.00 37.59 3.27
392 393 1.029681 GGAAGAGTGGTTGCGGTTTT 58.970 50.000 0.00 0.00 0.00 2.43
393 394 1.001706 GGAAGAGTGGTTGCGGTTTTC 60.002 52.381 0.00 0.00 0.00 2.29
394 395 1.673920 GAAGAGTGGTTGCGGTTTTCA 59.326 47.619 0.00 0.00 0.00 2.69
395 396 1.981256 AGAGTGGTTGCGGTTTTCAT 58.019 45.000 0.00 0.00 0.00 2.57
396 397 1.880027 AGAGTGGTTGCGGTTTTCATC 59.120 47.619 0.00 0.00 0.00 2.92
397 398 1.880027 GAGTGGTTGCGGTTTTCATCT 59.120 47.619 0.00 0.00 0.00 2.90
398 399 2.293399 GAGTGGTTGCGGTTTTCATCTT 59.707 45.455 0.00 0.00 0.00 2.40
399 400 2.693074 AGTGGTTGCGGTTTTCATCTTT 59.307 40.909 0.00 0.00 0.00 2.52
400 401 3.132111 AGTGGTTGCGGTTTTCATCTTTT 59.868 39.130 0.00 0.00 0.00 2.27
401 402 3.868661 GTGGTTGCGGTTTTCATCTTTTT 59.131 39.130 0.00 0.00 0.00 1.94
402 403 4.026062 GTGGTTGCGGTTTTCATCTTTTTC 60.026 41.667 0.00 0.00 0.00 2.29
403 404 4.142049 TGGTTGCGGTTTTCATCTTTTTCT 60.142 37.500 0.00 0.00 0.00 2.52
404 405 4.209080 GGTTGCGGTTTTCATCTTTTTCTG 59.791 41.667 0.00 0.00 0.00 3.02
405 406 4.909696 TGCGGTTTTCATCTTTTTCTGA 57.090 36.364 0.00 0.00 0.00 3.27
406 407 5.255710 TGCGGTTTTCATCTTTTTCTGAA 57.744 34.783 0.00 0.00 0.00 3.02
407 408 5.280945 TGCGGTTTTCATCTTTTTCTGAAG 58.719 37.500 0.00 0.00 33.25 3.02
408 409 4.148871 GCGGTTTTCATCTTTTTCTGAAGC 59.851 41.667 0.00 0.00 33.25 3.86
409 410 5.280945 CGGTTTTCATCTTTTTCTGAAGCA 58.719 37.500 0.00 0.00 33.25 3.91
410 411 5.400485 CGGTTTTCATCTTTTTCTGAAGCAG 59.600 40.000 0.00 0.00 33.25 4.24
411 412 6.507023 GGTTTTCATCTTTTTCTGAAGCAGA 58.493 36.000 0.00 0.00 38.87 4.26
412 413 6.640092 GGTTTTCATCTTTTTCTGAAGCAGAG 59.360 38.462 0.00 0.00 41.75 3.35
413 414 5.954296 TTCATCTTTTTCTGAAGCAGAGG 57.046 39.130 0.00 6.34 41.75 3.69
414 415 4.978099 TCATCTTTTTCTGAAGCAGAGGT 58.022 39.130 10.47 0.00 41.75 3.85
415 416 4.999950 TCATCTTTTTCTGAAGCAGAGGTC 59.000 41.667 10.47 0.00 41.75 3.85
416 417 3.393800 TCTTTTTCTGAAGCAGAGGTCG 58.606 45.455 0.00 0.00 41.75 4.79
417 418 2.910688 TTTTCTGAAGCAGAGGTCGT 57.089 45.000 0.00 0.00 41.75 4.34
418 419 2.154854 TTTCTGAAGCAGAGGTCGTG 57.845 50.000 0.00 0.00 41.75 4.35
419 420 1.328279 TTCTGAAGCAGAGGTCGTGA 58.672 50.000 0.00 0.00 41.75 4.35
420 421 1.550327 TCTGAAGCAGAGGTCGTGAT 58.450 50.000 0.00 0.00 35.39 3.06
421 422 1.895798 TCTGAAGCAGAGGTCGTGATT 59.104 47.619 0.00 0.00 35.39 2.57
422 423 2.300152 TCTGAAGCAGAGGTCGTGATTT 59.700 45.455 0.00 0.00 35.39 2.17
423 424 3.070018 CTGAAGCAGAGGTCGTGATTTT 58.930 45.455 0.00 0.00 32.44 1.82
424 425 3.067106 TGAAGCAGAGGTCGTGATTTTC 58.933 45.455 0.00 0.00 0.00 2.29
425 426 3.244215 TGAAGCAGAGGTCGTGATTTTCT 60.244 43.478 0.00 0.00 0.00 2.52
426 427 2.966050 AGCAGAGGTCGTGATTTTCTC 58.034 47.619 0.00 0.00 0.00 2.87
427 428 2.564947 AGCAGAGGTCGTGATTTTCTCT 59.435 45.455 0.00 0.00 35.44 3.10
428 429 3.007398 AGCAGAGGTCGTGATTTTCTCTT 59.993 43.478 0.00 0.00 33.09 2.85
429 430 3.748568 GCAGAGGTCGTGATTTTCTCTTT 59.251 43.478 0.00 0.00 33.09 2.52
430 431 4.929808 GCAGAGGTCGTGATTTTCTCTTTA 59.070 41.667 0.00 0.00 33.09 1.85
431 432 5.582665 GCAGAGGTCGTGATTTTCTCTTTAT 59.417 40.000 0.00 0.00 33.09 1.40
432 433 6.092807 GCAGAGGTCGTGATTTTCTCTTTATT 59.907 38.462 0.00 0.00 33.09 1.40
433 434 7.675170 GCAGAGGTCGTGATTTTCTCTTTATTC 60.675 40.741 0.00 0.00 33.09 1.75
434 435 6.531948 AGAGGTCGTGATTTTCTCTTTATTCG 59.468 38.462 0.00 0.00 31.52 3.34
435 436 6.395629 AGGTCGTGATTTTCTCTTTATTCGA 58.604 36.000 0.00 0.00 0.00 3.71
436 437 6.531948 AGGTCGTGATTTTCTCTTTATTCGAG 59.468 38.462 0.00 0.00 0.00 4.04
437 438 6.530534 GGTCGTGATTTTCTCTTTATTCGAGA 59.469 38.462 0.00 0.00 35.83 4.04
438 439 7.063074 GGTCGTGATTTTCTCTTTATTCGAGAA 59.937 37.037 0.00 0.00 43.61 2.87
447 448 9.653287 TTTCTCTTTATTCGAGAAAGCATAGAA 57.347 29.630 14.10 14.16 46.71 2.10
448 449 9.823647 TTCTCTTTATTCGAGAAAGCATAGAAT 57.176 29.630 14.10 0.00 42.68 2.40
449 450 9.254133 TCTCTTTATTCGAGAAAGCATAGAATG 57.746 33.333 14.10 0.00 34.77 2.67
450 451 8.948631 TCTTTATTCGAGAAAGCATAGAATGT 57.051 30.769 14.10 0.00 34.51 2.71
451 452 8.820933 TCTTTATTCGAGAAAGCATAGAATGTG 58.179 33.333 14.10 0.00 34.51 3.21
452 453 4.864916 TTCGAGAAAGCATAGAATGTGC 57.135 40.909 0.00 0.00 42.81 4.57
459 460 2.659731 GCATAGAATGTGCTTCTCGC 57.340 50.000 0.00 0.00 43.32 5.03
460 461 1.070975 GCATAGAATGTGCTTCTCGCG 60.071 52.381 0.00 0.00 43.32 5.87
461 462 1.524355 CATAGAATGTGCTTCTCGCGG 59.476 52.381 6.13 0.00 43.32 6.46
462 463 0.815095 TAGAATGTGCTTCTCGCGGA 59.185 50.000 6.13 0.00 43.32 5.54
463 464 0.037326 AGAATGTGCTTCTCGCGGAA 60.037 50.000 6.13 8.10 40.26 4.30
480 481 4.785669 CGGAAGCATGATTGTACTTCTC 57.214 45.455 0.00 0.00 38.81 2.87
481 482 3.243877 CGGAAGCATGATTGTACTTCTCG 59.756 47.826 0.00 3.48 38.81 4.04
482 483 4.184629 GGAAGCATGATTGTACTTCTCGT 58.815 43.478 0.00 0.00 38.81 4.18
483 484 4.033358 GGAAGCATGATTGTACTTCTCGTG 59.967 45.833 0.00 1.54 38.81 4.35
484 485 3.525537 AGCATGATTGTACTTCTCGTGG 58.474 45.455 0.00 0.00 0.00 4.94
485 486 3.195610 AGCATGATTGTACTTCTCGTGGA 59.804 43.478 0.00 0.00 0.00 4.02
486 487 3.932710 GCATGATTGTACTTCTCGTGGAA 59.067 43.478 0.00 0.00 0.00 3.53
494 495 2.670401 CTTCTCGTGGAAGCACAAAC 57.330 50.000 7.65 0.00 43.88 2.93
495 496 2.213499 CTTCTCGTGGAAGCACAAACT 58.787 47.619 7.65 0.00 43.88 2.66
496 497 1.581934 TCTCGTGGAAGCACAAACTG 58.418 50.000 0.00 0.00 0.00 3.16
497 498 1.134521 TCTCGTGGAAGCACAAACTGT 60.135 47.619 0.00 0.00 0.00 3.55
498 499 2.101750 TCTCGTGGAAGCACAAACTGTA 59.898 45.455 0.00 0.00 0.00 2.74
499 500 2.206750 TCGTGGAAGCACAAACTGTAC 58.793 47.619 0.00 0.00 0.00 2.90
500 501 2.159014 TCGTGGAAGCACAAACTGTACT 60.159 45.455 0.00 0.00 0.00 2.73
501 502 2.612212 CGTGGAAGCACAAACTGTACTT 59.388 45.455 0.00 0.00 36.72 2.24
502 503 3.064820 CGTGGAAGCACAAACTGTACTTT 59.935 43.478 0.00 0.00 34.33 2.66
503 504 4.438200 CGTGGAAGCACAAACTGTACTTTT 60.438 41.667 0.00 0.00 34.33 2.27
504 505 4.798387 GTGGAAGCACAAACTGTACTTTTG 59.202 41.667 15.11 15.11 34.33 2.44
505 506 4.702612 TGGAAGCACAAACTGTACTTTTGA 59.297 37.500 20.67 1.60 34.33 2.69
506 507 5.359576 TGGAAGCACAAACTGTACTTTTGAT 59.640 36.000 20.67 8.59 34.33 2.57
507 508 5.687285 GGAAGCACAAACTGTACTTTTGATG 59.313 40.000 20.67 16.27 34.33 3.07
508 509 6.449635 AAGCACAAACTGTACTTTTGATGA 57.550 33.333 20.67 0.00 30.17 2.92
509 510 6.449635 AGCACAAACTGTACTTTTGATGAA 57.550 33.333 20.67 0.00 37.39 2.57
510 511 6.862209 AGCACAAACTGTACTTTTGATGAAA 58.138 32.000 20.67 0.00 37.39 2.69
527 528 8.510243 TTGATGAAAGCAAATAGAAGCATAGA 57.490 30.769 0.00 0.00 40.52 1.98
528 529 8.687292 TGATGAAAGCAAATAGAAGCATAGAT 57.313 30.769 0.00 0.00 0.00 1.98
529 530 9.128404 TGATGAAAGCAAATAGAAGCATAGATT 57.872 29.630 0.00 0.00 0.00 2.40
530 531 9.962783 GATGAAAGCAAATAGAAGCATAGATTT 57.037 29.630 0.00 0.00 0.00 2.17
531 532 9.745880 ATGAAAGCAAATAGAAGCATAGATTTG 57.254 29.630 8.83 8.83 40.60 2.32
540 541 1.734885 GCATAGATTTGCTTGTCGCG 58.265 50.000 0.00 0.00 43.27 5.87
541 542 1.595489 GCATAGATTTGCTTGTCGCGG 60.595 52.381 6.13 0.00 43.27 6.46
542 543 1.933181 CATAGATTTGCTTGTCGCGGA 59.067 47.619 6.13 0.00 43.27 5.54
543 544 2.309528 TAGATTTGCTTGTCGCGGAT 57.690 45.000 6.13 0.00 43.27 4.18
544 545 0.729116 AGATTTGCTTGTCGCGGATG 59.271 50.000 6.13 0.00 43.27 3.51
545 546 0.863119 GATTTGCTTGTCGCGGATGC 60.863 55.000 6.13 8.09 43.27 3.91
546 547 1.585267 ATTTGCTTGTCGCGGATGCA 61.585 50.000 6.13 10.75 42.97 3.96
547 548 1.790090 TTTGCTTGTCGCGGATGCAA 61.790 50.000 20.53 20.53 42.97 4.08
548 549 1.790090 TTGCTTGTCGCGGATGCAAA 61.790 50.000 21.49 11.06 42.97 3.68
549 550 1.137404 GCTTGTCGCGGATGCAAAT 59.863 52.632 6.13 0.00 42.97 2.32
550 551 0.863119 GCTTGTCGCGGATGCAAATC 60.863 55.000 6.13 0.00 42.97 2.17
551 552 0.729116 CTTGTCGCGGATGCAAATCT 59.271 50.000 6.13 0.00 42.97 2.40
552 553 0.447406 TTGTCGCGGATGCAAATCTG 59.553 50.000 6.13 0.00 42.97 2.90
553 554 0.673333 TGTCGCGGATGCAAATCTGT 60.673 50.000 6.13 0.00 42.97 3.41
554 555 0.247814 GTCGCGGATGCAAATCTGTG 60.248 55.000 6.13 3.70 42.97 3.66
555 556 1.584483 CGCGGATGCAAATCTGTGC 60.584 57.895 0.00 0.00 45.15 4.57
556 557 1.805254 GCGGATGCAAATCTGTGCT 59.195 52.632 0.00 0.00 45.17 4.40
557 558 0.171903 GCGGATGCAAATCTGTGCTT 59.828 50.000 0.00 0.00 45.17 3.91
558 559 1.796617 GCGGATGCAAATCTGTGCTTC 60.797 52.381 0.00 4.89 45.17 3.86
561 562 2.872370 GATGCAAATCTGTGCTTCCAC 58.128 47.619 0.00 0.00 45.17 4.02
562 563 0.592637 TGCAAATCTGTGCTTCCACG 59.407 50.000 0.00 0.00 45.04 4.94
563 564 0.874390 GCAAATCTGTGCTTCCACGA 59.126 50.000 0.00 0.00 45.04 4.35
564 565 1.135859 GCAAATCTGTGCTTCCACGAG 60.136 52.381 0.00 0.00 45.04 4.18
565 566 2.416747 CAAATCTGTGCTTCCACGAGA 58.583 47.619 0.00 0.00 45.04 4.04
566 567 2.807967 CAAATCTGTGCTTCCACGAGAA 59.192 45.455 0.00 0.00 45.04 2.87
567 568 2.839486 ATCTGTGCTTCCACGAGAAA 57.161 45.000 0.00 0.00 45.04 2.52
568 569 1.865865 TCTGTGCTTCCACGAGAAAC 58.134 50.000 0.00 0.00 45.04 2.78
569 570 1.138069 TCTGTGCTTCCACGAGAAACA 59.862 47.619 0.00 0.00 45.04 2.83
570 571 1.939934 CTGTGCTTCCACGAGAAACAA 59.060 47.619 0.00 0.00 45.04 2.83
571 572 1.939934 TGTGCTTCCACGAGAAACAAG 59.060 47.619 0.00 0.00 45.04 3.16
572 573 0.944386 TGCTTCCACGAGAAACAAGC 59.056 50.000 0.00 0.00 39.98 4.01
573 574 0.944386 GCTTCCACGAGAAACAAGCA 59.056 50.000 0.00 0.00 39.45 3.91
574 575 1.334149 GCTTCCACGAGAAACAAGCAC 60.334 52.381 0.00 0.00 39.45 4.40
575 576 1.939934 CTTCCACGAGAAACAAGCACA 59.060 47.619 0.00 0.00 32.88 4.57
576 577 2.254546 TCCACGAGAAACAAGCACAT 57.745 45.000 0.00 0.00 0.00 3.21
577 578 3.394674 TCCACGAGAAACAAGCACATA 57.605 42.857 0.00 0.00 0.00 2.29
578 579 3.937814 TCCACGAGAAACAAGCACATAT 58.062 40.909 0.00 0.00 0.00 1.78
579 580 4.323417 TCCACGAGAAACAAGCACATATT 58.677 39.130 0.00 0.00 0.00 1.28
580 581 4.759693 TCCACGAGAAACAAGCACATATTT 59.240 37.500 0.00 0.00 0.00 1.40
581 582 4.853196 CCACGAGAAACAAGCACATATTTG 59.147 41.667 0.00 0.00 0.00 2.32
582 583 5.451908 CACGAGAAACAAGCACATATTTGT 58.548 37.500 0.00 0.00 39.08 2.83
583 584 5.914635 CACGAGAAACAAGCACATATTTGTT 59.085 36.000 0.00 0.00 46.33 2.83
610 611 6.480524 TTAGAAGTACATTCACATGTGTGC 57.519 37.500 24.63 9.70 43.92 4.57
611 612 4.645535 AGAAGTACATTCACATGTGTGCT 58.354 39.130 24.63 11.82 43.92 4.40
613 614 5.362556 AAGTACATTCACATGTGTGCTTC 57.637 39.130 24.63 12.21 44.35 3.86
614 615 2.975410 ACATTCACATGTGTGCTTCG 57.025 45.000 24.63 11.26 42.46 3.79
615 616 1.536766 ACATTCACATGTGTGCTTCGG 59.463 47.619 24.63 11.16 42.46 4.30
616 617 1.805943 CATTCACATGTGTGCTTCGGA 59.194 47.619 24.63 0.35 45.25 4.55
617 618 1.960417 TTCACATGTGTGCTTCGGAA 58.040 45.000 24.63 6.97 45.25 4.30
618 619 1.960417 TCACATGTGTGCTTCGGAAA 58.040 45.000 24.63 0.00 45.25 3.13
619 620 2.293170 TCACATGTGTGCTTCGGAAAA 58.707 42.857 24.63 0.00 45.25 2.29
620 621 2.685388 TCACATGTGTGCTTCGGAAAAA 59.315 40.909 24.63 0.00 45.25 1.94
621 622 3.317711 TCACATGTGTGCTTCGGAAAAAT 59.682 39.130 24.63 0.00 45.25 1.82
622 623 4.050553 CACATGTGTGCTTCGGAAAAATT 58.949 39.130 18.03 0.00 39.39 1.82
623 624 4.148696 CACATGTGTGCTTCGGAAAAATTC 59.851 41.667 18.03 0.00 39.39 2.17
624 625 4.037923 ACATGTGTGCTTCGGAAAAATTCT 59.962 37.500 0.00 0.00 0.00 2.40
625 626 4.223320 TGTGTGCTTCGGAAAAATTCTC 57.777 40.909 0.00 0.00 0.00 2.87
626 627 3.004315 TGTGTGCTTCGGAAAAATTCTCC 59.996 43.478 0.00 0.00 0.00 3.71
627 628 3.004315 GTGTGCTTCGGAAAAATTCTCCA 59.996 43.478 7.19 0.00 32.77 3.86
628 629 3.634448 TGTGCTTCGGAAAAATTCTCCAA 59.366 39.130 7.19 1.45 32.77 3.53
629 630 4.098654 TGTGCTTCGGAAAAATTCTCCAAA 59.901 37.500 7.19 0.00 32.77 3.28
630 631 5.047188 GTGCTTCGGAAAAATTCTCCAAAA 58.953 37.500 7.19 1.25 32.77 2.44
631 632 5.696270 GTGCTTCGGAAAAATTCTCCAAAAT 59.304 36.000 7.19 0.00 32.77 1.82
632 633 6.202762 GTGCTTCGGAAAAATTCTCCAAAATT 59.797 34.615 7.19 0.00 32.77 1.82
633 634 6.423604 TGCTTCGGAAAAATTCTCCAAAATTC 59.576 34.615 7.19 0.00 32.77 2.17
634 635 6.646653 GCTTCGGAAAAATTCTCCAAAATTCT 59.353 34.615 7.19 0.00 32.77 2.40
635 636 7.812669 GCTTCGGAAAAATTCTCCAAAATTCTA 59.187 33.333 7.19 0.00 32.77 2.10
636 637 9.346725 CTTCGGAAAAATTCTCCAAAATTCTAG 57.653 33.333 7.19 0.00 32.77 2.43
637 638 7.826690 TCGGAAAAATTCTCCAAAATTCTAGG 58.173 34.615 7.19 0.00 32.77 3.02
638 639 7.035612 CGGAAAAATTCTCCAAAATTCTAGGG 58.964 38.462 7.19 0.00 32.77 3.53
639 640 7.093945 CGGAAAAATTCTCCAAAATTCTAGGGA 60.094 37.037 7.19 0.00 32.77 4.20
640 641 8.593679 GGAAAAATTCTCCAAAATTCTAGGGAA 58.406 33.333 2.35 0.00 32.93 3.97
647 648 9.632638 TTCTCCAAAATTCTAGGGAATATGAAG 57.367 33.333 0.00 0.00 40.86 3.02
648 649 7.721399 TCTCCAAAATTCTAGGGAATATGAAGC 59.279 37.037 0.00 0.00 40.86 3.86
649 650 7.353525 TCCAAAATTCTAGGGAATATGAAGCA 58.646 34.615 0.00 0.00 40.86 3.91
650 651 7.838696 TCCAAAATTCTAGGGAATATGAAGCAA 59.161 33.333 0.00 0.00 40.86 3.91
651 652 8.477256 CCAAAATTCTAGGGAATATGAAGCAAA 58.523 33.333 0.00 0.00 40.86 3.68
652 653 9.874205 CAAAATTCTAGGGAATATGAAGCAAAA 57.126 29.630 0.00 0.00 40.86 2.44
653 654 9.875691 AAAATTCTAGGGAATATGAAGCAAAAC 57.124 29.630 0.00 0.00 40.86 2.43
654 655 7.588497 ATTCTAGGGAATATGAAGCAAAACC 57.412 36.000 0.00 0.00 40.05 3.27
655 656 5.445964 TCTAGGGAATATGAAGCAAAACCC 58.554 41.667 0.00 0.00 36.67 4.11
656 657 4.059773 AGGGAATATGAAGCAAAACCCA 57.940 40.909 0.00 0.00 38.62 4.51
657 658 4.424842 AGGGAATATGAAGCAAAACCCAA 58.575 39.130 0.00 0.00 38.62 4.12
658 659 4.843516 AGGGAATATGAAGCAAAACCCAAA 59.156 37.500 0.00 0.00 38.62 3.28
659 660 5.046376 AGGGAATATGAAGCAAAACCCAAAG 60.046 40.000 0.00 0.00 38.62 2.77
660 661 4.631377 GGAATATGAAGCAAAACCCAAAGC 59.369 41.667 0.00 0.00 0.00 3.51
661 662 2.549064 ATGAAGCAAAACCCAAAGCC 57.451 45.000 0.00 0.00 0.00 4.35
662 663 0.467804 TGAAGCAAAACCCAAAGCCC 59.532 50.000 0.00 0.00 0.00 5.19
663 664 0.758734 GAAGCAAAACCCAAAGCCCT 59.241 50.000 0.00 0.00 0.00 5.19
664 665 1.967779 GAAGCAAAACCCAAAGCCCTA 59.032 47.619 0.00 0.00 0.00 3.53
665 666 1.338107 AGCAAAACCCAAAGCCCTAC 58.662 50.000 0.00 0.00 0.00 3.18
666 667 1.133167 AGCAAAACCCAAAGCCCTACT 60.133 47.619 0.00 0.00 0.00 2.57
667 668 1.000843 GCAAAACCCAAAGCCCTACTG 59.999 52.381 0.00 0.00 0.00 2.74
668 669 2.316108 CAAAACCCAAAGCCCTACTGT 58.684 47.619 0.00 0.00 0.00 3.55
669 670 3.492337 CAAAACCCAAAGCCCTACTGTA 58.508 45.455 0.00 0.00 0.00 2.74
670 671 3.887916 AAACCCAAAGCCCTACTGTAA 57.112 42.857 0.00 0.00 0.00 2.41
671 672 3.434940 AACCCAAAGCCCTACTGTAAG 57.565 47.619 0.00 0.00 42.29 2.34
672 673 1.633945 ACCCAAAGCCCTACTGTAAGG 59.366 52.381 0.00 0.00 39.30 2.69
673 674 1.633945 CCCAAAGCCCTACTGTAAGGT 59.366 52.381 4.48 0.00 39.30 3.50
674 675 2.355818 CCCAAAGCCCTACTGTAAGGTC 60.356 54.545 4.48 0.00 39.30 3.85
675 676 2.355818 CCAAAGCCCTACTGTAAGGTCC 60.356 54.545 4.48 0.00 39.30 4.46
676 677 2.304761 CAAAGCCCTACTGTAAGGTCCA 59.695 50.000 4.48 0.00 39.30 4.02
677 678 2.337359 AGCCCTACTGTAAGGTCCAA 57.663 50.000 4.48 0.00 39.30 3.53
678 679 1.907255 AGCCCTACTGTAAGGTCCAAC 59.093 52.381 4.48 0.00 39.30 3.77
679 680 1.626825 GCCCTACTGTAAGGTCCAACA 59.373 52.381 4.48 0.00 39.30 3.33
680 681 2.614734 GCCCTACTGTAAGGTCCAACAC 60.615 54.545 4.48 0.00 39.30 3.32
681 682 2.635915 CCCTACTGTAAGGTCCAACACA 59.364 50.000 0.00 0.00 39.30 3.72
682 683 3.306780 CCCTACTGTAAGGTCCAACACAG 60.307 52.174 13.25 13.25 43.21 3.66
683 684 3.576982 CCTACTGTAAGGTCCAACACAGA 59.423 47.826 19.02 6.87 40.67 3.41
684 685 3.470645 ACTGTAAGGTCCAACACAGAC 57.529 47.619 19.02 0.00 40.67 3.51
685 686 2.769663 ACTGTAAGGTCCAACACAGACA 59.230 45.455 19.02 1.13 40.67 3.41
686 687 3.181465 ACTGTAAGGTCCAACACAGACAG 60.181 47.826 19.02 10.59 40.67 3.51
687 688 3.035363 TGTAAGGTCCAACACAGACAGA 58.965 45.455 0.00 0.00 35.89 3.41
688 689 2.918712 AAGGTCCAACACAGACAGAG 57.081 50.000 0.00 0.00 35.89 3.35
689 690 2.088104 AGGTCCAACACAGACAGAGA 57.912 50.000 0.00 0.00 35.89 3.10
690 691 2.614259 AGGTCCAACACAGACAGAGAT 58.386 47.619 0.00 0.00 35.89 2.75
691 692 3.779444 AGGTCCAACACAGACAGAGATA 58.221 45.455 0.00 0.00 35.89 1.98
692 693 4.160329 AGGTCCAACACAGACAGAGATAA 58.840 43.478 0.00 0.00 35.89 1.75
693 694 4.593206 AGGTCCAACACAGACAGAGATAAA 59.407 41.667 0.00 0.00 35.89 1.40
694 695 5.071788 AGGTCCAACACAGACAGAGATAAAA 59.928 40.000 0.00 0.00 35.89 1.52
695 696 5.763204 GGTCCAACACAGACAGAGATAAAAA 59.237 40.000 0.00 0.00 35.89 1.94
724 725 9.388506 AGTTGAAACCTGACAGAGATAATAATG 57.611 33.333 3.32 0.00 0.00 1.90
750 751 1.966845 AGGCTTGCTTACTTCCCCTA 58.033 50.000 0.00 0.00 0.00 3.53
751 752 2.275466 AGGCTTGCTTACTTCCCCTAA 58.725 47.619 0.00 0.00 0.00 2.69
782 783 4.202050 ACAAAACAAGGCTTGCTTACTGAG 60.202 41.667 26.45 11.32 0.00 3.35
785 786 3.341823 ACAAGGCTTGCTTACTGAGATG 58.658 45.455 26.45 0.00 0.00 2.90
790 791 2.417379 GCTTGCTTACTGAGATGGACGA 60.417 50.000 0.00 0.00 0.00 4.20
822 828 2.496070 CCTAGTTCACTGGTTGGATCGA 59.504 50.000 0.00 0.00 0.00 3.59
840 846 4.925576 CGGCCCAGCTAGCGTACG 62.926 72.222 11.84 11.84 0.00 3.67
899 905 2.918712 ATTCACGGATCATGGAGACC 57.081 50.000 0.00 0.00 0.00 3.85
1042 1054 4.046618 CCTCCTCCTCCTTTATATCTCCCT 59.953 50.000 0.00 0.00 0.00 4.20
1226 1246 3.025866 CGGGTACGTGCTTACAGAC 57.974 57.895 3.01 0.00 34.81 3.51
1229 1249 1.206371 GGGTACGTGCTTACAGACCAT 59.794 52.381 3.01 0.00 0.00 3.55
1230 1250 2.428171 GGGTACGTGCTTACAGACCATA 59.572 50.000 3.01 0.00 0.00 2.74
1231 1251 3.490419 GGGTACGTGCTTACAGACCATAG 60.490 52.174 3.01 0.00 0.00 2.23
1239 1259 5.581085 GTGCTTACAGACCATAGGTTACTTG 59.419 44.000 0.00 0.00 35.25 3.16
1243 1263 3.583086 ACAGACCATAGGTTACTTGCACT 59.417 43.478 0.00 0.00 35.25 4.40
1244 1264 3.935203 CAGACCATAGGTTACTTGCACTG 59.065 47.826 0.00 0.00 35.25 3.66
1265 1285 2.901840 CACACCGCACTGCCAGTT 60.902 61.111 0.00 0.00 0.00 3.16
1266 1286 2.124320 ACACCGCACTGCCAGTTT 60.124 55.556 0.00 0.00 0.00 2.66
1267 1287 2.332514 CACCGCACTGCCAGTTTG 59.667 61.111 0.00 0.00 0.00 2.93
1268 1288 3.595758 ACCGCACTGCCAGTTTGC 61.596 61.111 0.00 0.00 0.00 3.68
1269 1289 4.347453 CCGCACTGCCAGTTTGCC 62.347 66.667 0.00 0.00 32.31 4.52
1270 1290 3.594775 CGCACTGCCAGTTTGCCA 61.595 61.111 0.00 0.00 32.31 4.92
1271 1291 2.922950 CGCACTGCCAGTTTGCCAT 61.923 57.895 0.00 0.00 32.31 4.40
1272 1292 1.080298 GCACTGCCAGTTTGCCATC 60.080 57.895 0.00 0.00 0.00 3.51
1273 1293 1.210931 CACTGCCAGTTTGCCATCG 59.789 57.895 0.00 0.00 0.00 3.84
1274 1294 2.180017 CTGCCAGTTTGCCATCGC 59.820 61.111 0.00 0.00 0.00 4.58
1275 1295 2.282391 TGCCAGTTTGCCATCGCT 60.282 55.556 0.00 0.00 35.36 4.93
1276 1296 2.180017 GCCAGTTTGCCATCGCTG 59.820 61.111 0.00 0.00 35.36 5.18
1277 1297 2.180017 CCAGTTTGCCATCGCTGC 59.820 61.111 0.00 0.00 35.36 5.25
1278 1298 2.180017 CAGTTTGCCATCGCTGCC 59.820 61.111 0.00 0.00 35.36 4.85
1279 1299 3.434319 AGTTTGCCATCGCTGCCG 61.434 61.111 0.00 0.00 35.36 5.69
1280 1300 3.737172 GTTTGCCATCGCTGCCGT 61.737 61.111 0.00 0.00 35.36 5.68
1281 1301 3.736100 TTTGCCATCGCTGCCGTG 61.736 61.111 0.00 0.00 35.36 4.94
1333 1353 1.334992 CGATCGTGACGCGTTCTTGT 61.335 55.000 15.53 0.00 42.13 3.16
1334 1354 0.782384 GATCGTGACGCGTTCTTGTT 59.218 50.000 15.53 0.00 42.13 2.83
1335 1355 0.506932 ATCGTGACGCGTTCTTGTTG 59.493 50.000 15.53 0.00 42.13 3.33
1759 1790 1.732917 CCAGCTCAACCGCAACAAA 59.267 52.632 0.00 0.00 0.00 2.83
1760 1791 0.594796 CCAGCTCAACCGCAACAAAC 60.595 55.000 0.00 0.00 0.00 2.93
1769 1800 2.027460 GCAACAAACCCAGCCACG 59.973 61.111 0.00 0.00 0.00 4.94
1788 1822 0.107848 GCAGCCAAGGTACGGTACAT 60.108 55.000 19.14 10.15 0.00 2.29
1799 1833 1.065928 CGGTACATGAGCTCCGTCC 59.934 63.158 12.15 10.55 38.45 4.79
1803 1837 0.668535 TACATGAGCTCCGTCCATCG 59.331 55.000 12.15 0.00 39.52 3.84
1806 1840 0.316522 ATGAGCTCCGTCCATCGATG 59.683 55.000 18.76 18.76 42.86 3.84
1824 1862 0.107066 TGCATCGAGGCCATCACATT 60.107 50.000 20.64 0.00 0.00 2.71
1828 1866 0.107066 TCGAGGCCATCACATTGCAT 60.107 50.000 5.01 0.00 0.00 3.96
1829 1867 0.309922 CGAGGCCATCACATTGCATC 59.690 55.000 5.01 0.00 32.84 3.91
1830 1868 1.395635 GAGGCCATCACATTGCATCA 58.604 50.000 5.01 0.00 35.97 3.07
1841 1879 3.001026 CACATTGCATCAGTGATCTCGAC 59.999 47.826 1.56 0.00 35.33 4.20
1843 1881 1.478631 TGCATCAGTGATCTCGACCT 58.521 50.000 1.56 0.00 0.00 3.85
1844 1882 1.135721 TGCATCAGTGATCTCGACCTG 59.864 52.381 1.56 0.00 0.00 4.00
1845 1883 1.135915 GCATCAGTGATCTCGACCTGT 59.864 52.381 1.56 0.00 0.00 4.00
1846 1884 2.417924 GCATCAGTGATCTCGACCTGTT 60.418 50.000 1.56 0.00 0.00 3.16
1847 1885 3.185330 CATCAGTGATCTCGACCTGTTG 58.815 50.000 1.56 0.00 0.00 3.33
1848 1886 2.514803 TCAGTGATCTCGACCTGTTGA 58.485 47.619 0.00 0.00 0.00 3.18
1849 1887 2.489722 TCAGTGATCTCGACCTGTTGAG 59.510 50.000 8.04 8.04 41.44 3.02
1866 1904 2.560504 TGAGTGTCGACTGCAAAATGT 58.439 42.857 17.92 0.00 30.16 2.71
1881 1919 2.949177 AATGTACACTGCAACCCTGA 57.051 45.000 0.00 0.00 0.00 3.86
1886 1924 0.036952 ACACTGCAACCCTGATCGAG 60.037 55.000 0.00 0.00 0.00 4.04
1896 1934 1.005340 CCTGATCGAGCTGCTGAAAC 58.995 55.000 7.01 5.09 0.00 2.78
1898 1936 0.321346 TGATCGAGCTGCTGAAACCA 59.679 50.000 7.01 3.11 0.00 3.67
1903 1941 2.622942 TCGAGCTGCTGAAACCATTTTT 59.377 40.909 7.01 0.00 0.00 1.94
2040 2078 1.626654 CGTCGGGTGCTAGTTTGCTG 61.627 60.000 0.00 0.00 0.00 4.41
2043 2081 1.003118 TCGGGTGCTAGTTTGCTGATT 59.997 47.619 0.00 0.00 0.00 2.57
2048 2086 4.640201 GGGTGCTAGTTTGCTGATTAATGA 59.360 41.667 0.00 0.00 0.00 2.57
2056 2094 5.647658 AGTTTGCTGATTAATGAACGGATGA 59.352 36.000 0.00 0.00 0.00 2.92
2057 2095 6.150976 AGTTTGCTGATTAATGAACGGATGAA 59.849 34.615 0.00 0.00 0.00 2.57
2072 2110 4.194640 CGGATGAACTCACCATTTGATCT 58.805 43.478 0.00 0.00 32.17 2.75
2197 2267 0.673644 AAGCGTGTGTAGTGCCCATC 60.674 55.000 0.00 0.00 0.00 3.51
2241 3660 8.462016 AGAGTGCTGATTATTTACAACAAATCC 58.538 33.333 0.00 0.00 0.00 3.01
2287 3706 4.277476 AGTGCTTCATACTCTAGCTCTGT 58.723 43.478 0.00 0.00 37.36 3.41
2292 3711 5.748152 GCTTCATACTCTAGCTCTGTCAAAG 59.252 44.000 0.00 0.00 32.26 2.77
2301 3720 3.201290 AGCTCTGTCAAAGTCACTTGTG 58.799 45.455 0.00 0.00 0.00 3.33
2330 3759 5.048504 CACCACACACTAGAAGAATGCAAAT 60.049 40.000 0.00 0.00 0.00 2.32
2331 3760 5.182001 ACCACACACTAGAAGAATGCAAATC 59.818 40.000 0.00 0.00 0.00 2.17
2337 3766 9.713740 CACACTAGAAGAATGCAAATCTATTTC 57.286 33.333 5.88 1.48 0.00 2.17
2343 3772 9.028284 AGAAGAATGCAAATCTATTTCTTTCCA 57.972 29.630 9.82 0.00 0.00 3.53
2363 3792 9.454859 CTTTCCAATAGATCCAGTTTCTTTAGT 57.545 33.333 0.00 0.00 0.00 2.24
2367 3796 4.473477 AGATCCAGTTTCTTTAGTCCCG 57.527 45.455 0.00 0.00 0.00 5.14
2368 3797 4.094476 AGATCCAGTTTCTTTAGTCCCGA 58.906 43.478 0.00 0.00 0.00 5.14
2372 3801 3.399330 CAGTTTCTTTAGTCCCGAAGCA 58.601 45.455 0.00 0.00 0.00 3.91
2375 3804 3.478857 TTCTTTAGTCCCGAAGCAACA 57.521 42.857 0.00 0.00 0.00 3.33
2390 3819 2.238144 AGCAACAGTAGGATCATGCACT 59.762 45.455 0.00 0.00 36.30 4.40
2392 3821 3.681034 GCAACAGTAGGATCATGCACTCT 60.681 47.826 0.00 0.00 34.10 3.24
2396 3825 4.202202 ACAGTAGGATCATGCACTCTTAGC 60.202 45.833 0.00 0.00 0.00 3.09
2401 3830 3.691118 GGATCATGCACTCTTAGCAACAA 59.309 43.478 0.00 0.00 46.27 2.83
2412 3841 2.194201 TAGCAACAACCTAAGGGCAC 57.806 50.000 0.00 0.00 35.63 5.01
2453 3882 7.288621 ACATCAGGATAGAACACATCATGTAGA 59.711 37.037 0.00 0.00 42.31 2.59
2456 3887 6.922407 CAGGATAGAACACATCATGTAGACTG 59.078 42.308 0.00 0.00 42.31 3.51
2463 3894 5.423015 ACACATCATGTAGACTGCCTAAAG 58.577 41.667 0.00 0.00 40.88 1.85
2513 3944 9.542462 TGTAGTACCATTAGAGAATGTAAATGC 57.458 33.333 0.00 0.00 40.87 3.56
2514 3945 9.542462 GTAGTACCATTAGAGAATGTAAATGCA 57.458 33.333 0.00 0.00 40.87 3.96
2516 3947 9.113838 AGTACCATTAGAGAATGTAAATGCAAG 57.886 33.333 0.00 0.00 40.87 4.01
2517 3948 9.109393 GTACCATTAGAGAATGTAAATGCAAGA 57.891 33.333 0.00 0.00 40.87 3.02
2518 3949 8.757982 ACCATTAGAGAATGTAAATGCAAGAT 57.242 30.769 0.00 0.00 40.87 2.40
2519 3950 9.193806 ACCATTAGAGAATGTAAATGCAAGATT 57.806 29.630 0.00 0.00 40.87 2.40
2520 3951 9.674824 CCATTAGAGAATGTAAATGCAAGATTC 57.325 33.333 0.00 0.00 40.87 2.52
2525 3956 8.127327 AGAGAATGTAAATGCAAGATTCAATCG 58.873 33.333 8.85 0.00 30.98 3.34
2526 3957 7.765307 AGAATGTAAATGCAAGATTCAATCGT 58.235 30.769 8.85 0.00 30.98 3.73
2527 3958 8.246180 AGAATGTAAATGCAAGATTCAATCGTT 58.754 29.630 8.85 0.00 30.98 3.85
2528 3959 7.745022 ATGTAAATGCAAGATTCAATCGTTG 57.255 32.000 0.00 0.00 0.00 4.10
2545 3976 6.757897 ATCGTTGCCTAAGATTTGATTTCA 57.242 33.333 0.00 0.00 0.00 2.69
2550 3981 8.375465 CGTTGCCTAAGATTTGATTTCAATTTC 58.625 33.333 0.00 0.00 35.55 2.17
2563 3994 7.364970 TGATTTCAATTTCATATGAGCATCGG 58.635 34.615 5.39 0.27 38.61 4.18
2569 4000 5.868043 TTTCATATGAGCATCGGCATTAG 57.132 39.130 5.39 0.00 44.61 1.73
2570 4001 3.865446 TCATATGAGCATCGGCATTAGG 58.135 45.455 0.00 0.00 44.61 2.69
2586 4017 6.093495 CGGCATTAGGTTTCACTTGAAGATAA 59.907 38.462 0.00 0.00 35.21 1.75
2626 4057 1.678635 GCTTACACAGGCATGCCCA 60.679 57.895 33.14 10.69 36.58 5.36
2627 4058 1.250154 GCTTACACAGGCATGCCCAA 61.250 55.000 33.14 17.24 36.58 4.12
2657 4088 5.490139 GCAAGAAGCAACATAGCAAGATA 57.510 39.130 0.00 0.00 44.79 1.98
2710 4141 6.874134 AGTACAAGAAACTATTGAGCGACATT 59.126 34.615 0.00 0.00 0.00 2.71
2715 4146 5.233050 AGAAACTATTGAGCGACATTCATCG 59.767 40.000 0.00 0.00 45.09 3.84
2717 4148 4.294232 ACTATTGAGCGACATTCATCGAG 58.706 43.478 0.00 0.00 45.13 4.04
2718 4149 1.926561 TTGAGCGACATTCATCGAGG 58.073 50.000 0.00 0.00 45.13 4.63
2728 4159 6.454848 GCGACATTCATCGAGGATATGATTTC 60.455 42.308 20.89 11.82 45.13 2.17
2773 4205 2.605030 CACACCAAACACAACACAAGG 58.395 47.619 0.00 0.00 0.00 3.61
2788 4220 1.691196 CAAGGAAGGACTTGCCAACA 58.309 50.000 0.00 0.00 41.09 3.33
2792 4225 1.067060 GGAAGGACTTGCCAACACAAC 59.933 52.381 0.00 0.00 40.02 3.32
2822 4255 2.846206 ACTATTCTCTTCATGGCACCCA 59.154 45.455 0.00 0.00 38.19 4.51
2842 4275 0.754957 TCAACCAGGGCAACACAAGG 60.755 55.000 0.00 0.00 39.74 3.61
2854 4287 0.773644 ACACAAGGAGAACCATGGCT 59.226 50.000 13.04 0.00 38.95 4.75
2855 4288 1.171308 CACAAGGAGAACCATGGCTG 58.829 55.000 13.04 0.56 38.95 4.85
2863 4296 2.036346 GAGAACCATGGCTGTTGCTTTT 59.964 45.455 13.04 0.00 39.59 2.27
2877 4310 4.402155 TGTTGCTTTTCTTGTCCTTGTGAT 59.598 37.500 0.00 0.00 0.00 3.06
2878 4311 4.572985 TGCTTTTCTTGTCCTTGTGATG 57.427 40.909 0.00 0.00 0.00 3.07
2897 4330 1.228657 GGTGTCTTCTTGTGCGGGTC 61.229 60.000 0.00 0.00 0.00 4.46
2946 4379 2.297033 TGGCAAGGCAAAAGAAGACATC 59.703 45.455 0.00 0.00 0.00 3.06
2959 4392 6.566079 AAGAAGACATCATCATAAGGACCA 57.434 37.500 0.00 0.00 0.00 4.02
3003 4436 0.323816 TTGTGTTGGCCTGGTTGACA 60.324 50.000 3.32 0.00 0.00 3.58
3005 4438 1.039856 GTGTTGGCCTGGTTGACAAT 58.960 50.000 3.32 0.00 0.00 2.71
3006 4439 1.039068 TGTTGGCCTGGTTGACAATG 58.961 50.000 3.32 0.00 0.00 2.82
3007 4440 0.319813 GTTGGCCTGGTTGACAATGC 60.320 55.000 3.32 0.00 0.00 3.56
3008 4441 1.470996 TTGGCCTGGTTGACAATGCC 61.471 55.000 3.32 11.75 43.75 4.40
3009 4442 1.907807 GGCCTGGTTGACAATGCCA 60.908 57.895 13.09 6.71 43.25 4.92
3010 4443 1.290009 GCCTGGTTGACAATGCCAC 59.710 57.895 0.00 0.00 0.00 5.01
3011 4444 1.580942 CCTGGTTGACAATGCCACG 59.419 57.895 0.00 0.00 0.00 4.94
3012 4445 1.081242 CTGGTTGACAATGCCACGC 60.081 57.895 0.00 0.00 0.00 5.34
3013 4446 2.258286 GGTTGACAATGCCACGCC 59.742 61.111 0.00 0.00 0.00 5.68
3014 4447 2.560119 GGTTGACAATGCCACGCCA 61.560 57.895 0.00 0.00 0.00 5.69
3015 4448 1.586028 GTTGACAATGCCACGCCAT 59.414 52.632 0.00 0.00 0.00 4.40
3016 4449 0.038343 GTTGACAATGCCACGCCATT 60.038 50.000 0.00 0.00 35.90 3.16
3019 4452 4.992515 CAATGCCACGCCATTGTT 57.007 50.000 13.02 0.00 44.33 2.83
3020 4453 2.447408 CAATGCCACGCCATTGTTG 58.553 52.632 13.02 0.00 44.33 3.33
3023 4456 1.876497 ATGCCACGCCATTGTTGTCC 61.876 55.000 0.00 0.00 0.00 4.02
3028 4461 4.114997 GCCATTGTTGTCCCGCCG 62.115 66.667 0.00 0.00 0.00 6.46
3060 4493 4.082026 GCAAGGGCAGAAATACAGACATTT 60.082 41.667 0.00 0.00 40.72 2.32
3087 4520 7.276438 GCTTGGCTAAAATCATTTCTAAAGGTG 59.724 37.037 0.00 0.00 0.00 4.00
3106 4539 1.221021 GAAACCGCGGAAGGATCCT 59.779 57.895 35.90 9.02 44.17 3.24
3152 4592 1.074244 GGGCCCACACCAAAAGTACTA 59.926 52.381 19.95 0.00 0.00 1.82
3163 4603 7.910162 CACACCAAAAGTACTATGATGTATTGC 59.090 37.037 7.98 0.00 0.00 3.56
3178 4618 4.620982 TGTATTGCCTACATCACATCTCG 58.379 43.478 0.00 0.00 35.38 4.04
3181 4621 3.610040 TGCCTACATCACATCTCGTTT 57.390 42.857 0.00 0.00 0.00 3.60
3189 4629 7.758076 CCTACATCACATCTCGTTTAACACTAA 59.242 37.037 0.00 0.00 0.00 2.24
3234 4676 6.990349 CCACCTTTTTGTTAGAGTACTCAAGA 59.010 38.462 24.44 12.10 0.00 3.02
3241 4683 2.949451 AGAGTACTCAAGATGCACGG 57.051 50.000 24.44 0.00 0.00 4.94
3243 4685 2.164624 AGAGTACTCAAGATGCACGGAC 59.835 50.000 24.44 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.103263 AGAGGTCCTAATTAGCGCTTGG 59.897 50.000 18.68 10.89 0.00 3.61
1 2 3.068873 AGAGAGGTCCTAATTAGCGCTTG 59.931 47.826 18.68 0.83 0.00 4.01
2 3 3.301274 AGAGAGGTCCTAATTAGCGCTT 58.699 45.455 18.68 0.00 0.00 4.68
3 4 2.952116 AGAGAGGTCCTAATTAGCGCT 58.048 47.619 17.26 17.26 0.00 5.92
4 5 4.073549 TCTAGAGAGGTCCTAATTAGCGC 58.926 47.826 6.99 0.00 0.00 5.92
5 6 6.487331 TCTTTCTAGAGAGGTCCTAATTAGCG 59.513 42.308 10.22 1.18 0.00 4.26
6 7 7.826918 TCTTTCTAGAGAGGTCCTAATTAGC 57.173 40.000 10.22 0.00 0.00 3.09
8 9 9.716556 ACAATCTTTCTAGAGAGGTCCTAATTA 57.283 33.333 10.22 0.00 32.92 1.40
9 10 8.616799 ACAATCTTTCTAGAGAGGTCCTAATT 57.383 34.615 10.22 0.00 32.92 1.40
11 12 7.282675 CGTACAATCTTTCTAGAGAGGTCCTAA 59.717 40.741 10.22 0.00 32.92 2.69
12 13 6.766944 CGTACAATCTTTCTAGAGAGGTCCTA 59.233 42.308 10.22 0.00 32.92 2.94
13 14 5.591067 CGTACAATCTTTCTAGAGAGGTCCT 59.409 44.000 10.22 0.00 32.92 3.85
14 15 5.589452 TCGTACAATCTTTCTAGAGAGGTCC 59.411 44.000 10.22 0.00 32.92 4.46
15 16 6.680874 TCGTACAATCTTTCTAGAGAGGTC 57.319 41.667 10.22 0.00 32.92 3.85
16 17 7.463961 TTTCGTACAATCTTTCTAGAGAGGT 57.536 36.000 10.22 0.00 32.92 3.85
17 18 8.191446 TGATTTCGTACAATCTTTCTAGAGAGG 58.809 37.037 10.22 0.00 34.66 3.69
18 19 9.232082 CTGATTTCGTACAATCTTTCTAGAGAG 57.768 37.037 3.86 3.86 34.66 3.20
19 20 7.702772 GCTGATTTCGTACAATCTTTCTAGAGA 59.297 37.037 7.28 0.00 34.66 3.10
20 21 7.043059 GGCTGATTTCGTACAATCTTTCTAGAG 60.043 40.741 7.28 0.00 34.66 2.43
21 22 6.757010 GGCTGATTTCGTACAATCTTTCTAGA 59.243 38.462 7.28 0.00 34.66 2.43
22 23 6.535150 TGGCTGATTTCGTACAATCTTTCTAG 59.465 38.462 7.28 0.00 34.66 2.43
23 24 6.403049 TGGCTGATTTCGTACAATCTTTCTA 58.597 36.000 7.28 0.00 34.66 2.10
24 25 5.245531 TGGCTGATTTCGTACAATCTTTCT 58.754 37.500 7.28 0.00 34.66 2.52
25 26 5.545658 TGGCTGATTTCGTACAATCTTTC 57.454 39.130 7.28 0.00 34.66 2.62
26 27 5.957842 TTGGCTGATTTCGTACAATCTTT 57.042 34.783 7.28 0.00 34.66 2.52
27 28 5.957842 TTTGGCTGATTTCGTACAATCTT 57.042 34.783 7.28 0.00 34.66 2.40
28 29 5.647658 TGATTTGGCTGATTTCGTACAATCT 59.352 36.000 7.28 0.00 34.66 2.40
29 30 5.739161 GTGATTTGGCTGATTTCGTACAATC 59.261 40.000 0.00 0.00 34.23 2.67
30 31 5.415701 AGTGATTTGGCTGATTTCGTACAAT 59.584 36.000 0.00 0.00 0.00 2.71
31 32 4.759693 AGTGATTTGGCTGATTTCGTACAA 59.240 37.500 0.00 0.00 0.00 2.41
32 33 4.323417 AGTGATTTGGCTGATTTCGTACA 58.677 39.130 0.00 0.00 0.00 2.90
33 34 4.946784 AGTGATTTGGCTGATTTCGTAC 57.053 40.909 0.00 0.00 0.00 3.67
34 35 5.730550 ACTAGTGATTTGGCTGATTTCGTA 58.269 37.500 0.00 0.00 0.00 3.43
35 36 4.579869 ACTAGTGATTTGGCTGATTTCGT 58.420 39.130 0.00 0.00 0.00 3.85
36 37 5.551760 AACTAGTGATTTGGCTGATTTCG 57.448 39.130 0.00 0.00 0.00 3.46
37 38 7.415653 CCCTTAACTAGTGATTTGGCTGATTTC 60.416 40.741 0.00 0.00 0.00 2.17
38 39 6.378280 CCCTTAACTAGTGATTTGGCTGATTT 59.622 38.462 0.00 0.00 0.00 2.17
39 40 5.888161 CCCTTAACTAGTGATTTGGCTGATT 59.112 40.000 0.00 0.00 0.00 2.57
40 41 5.044846 ACCCTTAACTAGTGATTTGGCTGAT 60.045 40.000 0.00 0.00 0.00 2.90
41 42 4.288626 ACCCTTAACTAGTGATTTGGCTGA 59.711 41.667 0.00 0.00 0.00 4.26
42 43 4.589908 ACCCTTAACTAGTGATTTGGCTG 58.410 43.478 0.00 0.00 0.00 4.85
43 44 4.929146 ACCCTTAACTAGTGATTTGGCT 57.071 40.909 0.00 0.00 0.00 4.75
44 45 5.356190 GGTAACCCTTAACTAGTGATTTGGC 59.644 44.000 0.00 0.00 0.00 4.52
45 46 6.997239 GGTAACCCTTAACTAGTGATTTGG 57.003 41.667 0.00 0.00 0.00 3.28
67 68 8.963455 GACTGATGAGTGACCTTTACAAGGGG 62.963 50.000 7.45 0.00 42.36 4.79
68 69 6.084821 GACTGATGAGTGACCTTTACAAGGG 61.085 48.000 7.45 0.00 42.36 3.95
69 70 4.932200 GACTGATGAGTGACCTTTACAAGG 59.068 45.833 0.67 0.67 43.18 3.61
70 71 5.541845 TGACTGATGAGTGACCTTTACAAG 58.458 41.667 0.00 0.00 30.16 3.16
71 72 5.545063 TGACTGATGAGTGACCTTTACAA 57.455 39.130 0.00 0.00 30.16 2.41
72 73 5.245977 TGATGACTGATGAGTGACCTTTACA 59.754 40.000 0.00 0.00 30.16 2.41
73 74 5.578727 GTGATGACTGATGAGTGACCTTTAC 59.421 44.000 0.00 0.00 30.16 2.01
74 75 5.337571 GGTGATGACTGATGAGTGACCTTTA 60.338 44.000 0.00 0.00 30.16 1.85
75 76 4.564406 GGTGATGACTGATGAGTGACCTTT 60.564 45.833 0.00 0.00 30.16 3.11
76 77 3.055530 GGTGATGACTGATGAGTGACCTT 60.056 47.826 0.00 0.00 30.16 3.50
77 78 2.499289 GGTGATGACTGATGAGTGACCT 59.501 50.000 0.00 0.00 30.16 3.85
78 79 2.499289 AGGTGATGACTGATGAGTGACC 59.501 50.000 0.00 0.00 30.16 4.02
79 80 3.883830 AGGTGATGACTGATGAGTGAC 57.116 47.619 0.00 0.00 30.16 3.67
80 81 4.092279 AGAAGGTGATGACTGATGAGTGA 58.908 43.478 0.00 0.00 30.16 3.41
81 82 4.431809 GAGAAGGTGATGACTGATGAGTG 58.568 47.826 0.00 0.00 30.16 3.51
82 83 3.450457 GGAGAAGGTGATGACTGATGAGT 59.550 47.826 0.00 0.00 33.98 3.41
83 84 3.450096 TGGAGAAGGTGATGACTGATGAG 59.550 47.826 0.00 0.00 0.00 2.90
84 85 3.444029 TGGAGAAGGTGATGACTGATGA 58.556 45.455 0.00 0.00 0.00 2.92
85 86 3.794717 CTGGAGAAGGTGATGACTGATG 58.205 50.000 0.00 0.00 0.00 3.07
86 87 2.170187 GCTGGAGAAGGTGATGACTGAT 59.830 50.000 0.00 0.00 0.00 2.90
87 88 1.552337 GCTGGAGAAGGTGATGACTGA 59.448 52.381 0.00 0.00 0.00 3.41
88 89 1.738365 CGCTGGAGAAGGTGATGACTG 60.738 57.143 0.00 0.00 0.00 3.51
89 90 0.534412 CGCTGGAGAAGGTGATGACT 59.466 55.000 0.00 0.00 0.00 3.41
90 91 1.086634 GCGCTGGAGAAGGTGATGAC 61.087 60.000 0.00 0.00 0.00 3.06
91 92 1.219124 GCGCTGGAGAAGGTGATGA 59.781 57.895 0.00 0.00 0.00 2.92
92 93 1.088340 CAGCGCTGGAGAAGGTGATG 61.088 60.000 29.88 0.00 35.63 3.07
93 94 1.220206 CAGCGCTGGAGAAGGTGAT 59.780 57.895 29.88 0.00 35.63 3.06
94 95 1.908299 TCAGCGCTGGAGAAGGTGA 60.908 57.895 35.36 11.89 39.64 4.02
95 96 1.739562 GTCAGCGCTGGAGAAGGTG 60.740 63.158 35.36 9.46 35.00 4.00
96 97 1.758440 TTGTCAGCGCTGGAGAAGGT 61.758 55.000 35.36 0.00 0.00 3.50
97 98 0.392193 ATTGTCAGCGCTGGAGAAGG 60.392 55.000 35.36 10.10 0.00 3.46
98 99 1.129998 CAATTGTCAGCGCTGGAGAAG 59.870 52.381 35.36 17.97 0.00 2.85
99 100 1.159285 CAATTGTCAGCGCTGGAGAA 58.841 50.000 35.36 24.93 0.00 2.87
100 101 0.674581 CCAATTGTCAGCGCTGGAGA 60.675 55.000 35.36 21.43 0.00 3.71
101 102 1.798735 CCAATTGTCAGCGCTGGAG 59.201 57.895 35.36 18.38 0.00 3.86
102 103 2.334946 GCCAATTGTCAGCGCTGGA 61.335 57.895 35.36 22.13 0.00 3.86
103 104 2.180017 GCCAATTGTCAGCGCTGG 59.820 61.111 35.36 20.54 0.00 4.85
104 105 2.180017 GGCCAATTGTCAGCGCTG 59.820 61.111 31.53 31.53 0.00 5.18
105 106 3.064324 GGGCCAATTGTCAGCGCT 61.064 61.111 2.64 2.64 36.60 5.92
106 107 3.372730 TGGGCCAATTGTCAGCGC 61.373 61.111 2.13 13.05 39.68 5.92
107 108 2.568090 GTGGGCCAATTGTCAGCG 59.432 61.111 8.40 0.00 0.00 5.18
108 109 2.649129 GGGTGGGCCAATTGTCAGC 61.649 63.158 8.40 9.06 36.17 4.26
109 110 1.984026 GGGGTGGGCCAATTGTCAG 60.984 63.158 8.40 0.00 36.17 3.51
110 111 2.119391 GGGGTGGGCCAATTGTCA 59.881 61.111 8.40 0.00 36.17 3.58
111 112 3.068064 CGGGGTGGGCCAATTGTC 61.068 66.667 8.40 0.00 36.17 3.18
112 113 3.909651 ACGGGGTGGGCCAATTGT 61.910 61.111 8.40 1.28 36.17 2.71
113 114 3.381136 CACGGGGTGGGCCAATTG 61.381 66.667 8.40 0.52 36.17 2.32
114 115 3.909651 ACACGGGGTGGGCCAATT 61.910 61.111 8.40 0.00 37.94 2.32
115 116 4.676951 CACACGGGGTGGGCCAAT 62.677 66.667 8.40 0.00 44.04 3.16
137 138 5.277297 GGAAAATTACCAAGTTGCAACAAGC 60.277 40.000 30.11 4.39 45.96 4.01
138 139 6.048509 AGGAAAATTACCAAGTTGCAACAAG 58.951 36.000 30.11 20.79 0.00 3.16
139 140 5.983540 AGGAAAATTACCAAGTTGCAACAA 58.016 33.333 30.11 16.09 0.00 2.83
140 141 5.606348 AGGAAAATTACCAAGTTGCAACA 57.394 34.783 30.11 9.90 0.00 3.33
141 142 6.918892 AAAGGAAAATTACCAAGTTGCAAC 57.081 33.333 22.17 22.17 0.00 4.17
142 143 7.929941 AAAAAGGAAAATTACCAAGTTGCAA 57.070 28.000 0.00 0.00 0.00 4.08
187 188 7.226325 CCACACATGGTTCAAAACATAAAATGT 59.774 33.333 0.00 0.00 42.76 2.71
188 189 7.574496 CCACACATGGTTCAAAACATAAAATG 58.426 34.615 0.00 0.00 41.64 2.32
189 190 7.727331 CCACACATGGTTCAAAACATAAAAT 57.273 32.000 0.00 0.00 41.64 1.82
204 205 7.307870 CAAAATGGTTTTGTATTCCACACATGG 60.308 37.037 0.00 0.00 44.58 3.66
205 206 7.574496 CAAAATGGTTTTGTATTCCACACATG 58.426 34.615 6.93 0.00 43.77 3.21
206 207 7.727331 CAAAATGGTTTTGTATTCCACACAT 57.273 32.000 6.93 0.00 43.77 3.21
219 220 6.546772 AGAAATGCAATGGTCAAAATGGTTTT 59.453 30.769 0.00 0.00 0.00 2.43
220 221 6.063404 AGAAATGCAATGGTCAAAATGGTTT 58.937 32.000 0.00 0.00 0.00 3.27
221 222 5.623169 AGAAATGCAATGGTCAAAATGGTT 58.377 33.333 0.00 0.00 0.00 3.67
222 223 5.231702 AGAAATGCAATGGTCAAAATGGT 57.768 34.783 0.00 0.00 0.00 3.55
223 224 5.933790 CAAGAAATGCAATGGTCAAAATGG 58.066 37.500 0.00 0.00 0.00 3.16
238 239 4.633126 TCAAAGATCTCGAGGCAAGAAATG 59.367 41.667 13.56 2.69 0.00 2.32
239 240 4.836825 TCAAAGATCTCGAGGCAAGAAAT 58.163 39.130 13.56 0.00 0.00 2.17
240 241 4.271696 TCAAAGATCTCGAGGCAAGAAA 57.728 40.909 13.56 0.00 0.00 2.52
241 242 3.961480 TCAAAGATCTCGAGGCAAGAA 57.039 42.857 13.56 0.00 0.00 2.52
242 243 3.961480 TTCAAAGATCTCGAGGCAAGA 57.039 42.857 13.56 0.99 0.00 3.02
243 244 3.999663 AGTTTCAAAGATCTCGAGGCAAG 59.000 43.478 13.56 0.00 0.00 4.01
244 245 4.008074 AGTTTCAAAGATCTCGAGGCAA 57.992 40.909 13.56 0.00 0.00 4.52
245 246 3.685139 AGTTTCAAAGATCTCGAGGCA 57.315 42.857 13.56 0.00 0.00 4.75
246 247 5.000012 TCTAGTTTCAAAGATCTCGAGGC 58.000 43.478 13.56 5.31 0.00 4.70
247 248 6.212955 GGATCTAGTTTCAAAGATCTCGAGG 58.787 44.000 13.56 0.00 44.94 4.63
248 249 6.212955 GGGATCTAGTTTCAAAGATCTCGAG 58.787 44.000 5.93 5.93 44.94 4.04
249 250 6.150396 GGGATCTAGTTTCAAAGATCTCGA 57.850 41.667 11.05 0.00 44.94 4.04
251 252 5.751028 CACGGGATCTAGTTTCAAAGATCTC 59.249 44.000 11.05 7.10 44.94 2.75
252 253 5.187967 ACACGGGATCTAGTTTCAAAGATCT 59.812 40.000 11.05 0.00 44.94 2.75
253 254 5.420409 ACACGGGATCTAGTTTCAAAGATC 58.580 41.667 0.00 4.15 44.88 2.75
254 255 5.422214 ACACGGGATCTAGTTTCAAAGAT 57.578 39.130 0.00 0.00 35.15 2.40
255 256 4.884668 ACACGGGATCTAGTTTCAAAGA 57.115 40.909 0.00 0.00 0.00 2.52
256 257 7.611213 ATTAACACGGGATCTAGTTTCAAAG 57.389 36.000 0.00 0.00 0.00 2.77
257 258 7.767198 CCTATTAACACGGGATCTAGTTTCAAA 59.233 37.037 0.00 0.00 0.00 2.69
258 259 7.093201 ACCTATTAACACGGGATCTAGTTTCAA 60.093 37.037 0.00 0.00 0.00 2.69
259 260 6.381994 ACCTATTAACACGGGATCTAGTTTCA 59.618 38.462 0.00 0.00 0.00 2.69
260 261 6.814043 ACCTATTAACACGGGATCTAGTTTC 58.186 40.000 0.00 0.00 0.00 2.78
261 262 6.803366 ACCTATTAACACGGGATCTAGTTT 57.197 37.500 0.00 0.00 0.00 2.66
262 263 6.803366 AACCTATTAACACGGGATCTAGTT 57.197 37.500 0.00 0.00 0.00 2.24
263 264 6.460676 CGAAACCTATTAACACGGGATCTAGT 60.461 42.308 0.00 0.00 0.00 2.57
264 265 5.919141 CGAAACCTATTAACACGGGATCTAG 59.081 44.000 0.00 0.00 0.00 2.43
265 266 5.593909 TCGAAACCTATTAACACGGGATCTA 59.406 40.000 0.00 0.00 0.00 1.98
266 267 4.403432 TCGAAACCTATTAACACGGGATCT 59.597 41.667 0.00 0.00 0.00 2.75
267 268 4.505556 GTCGAAACCTATTAACACGGGATC 59.494 45.833 0.00 0.00 0.00 3.36
268 269 4.436332 GTCGAAACCTATTAACACGGGAT 58.564 43.478 0.00 0.00 0.00 3.85
269 270 3.673052 CGTCGAAACCTATTAACACGGGA 60.673 47.826 0.00 0.00 0.00 5.14
270 271 2.599973 CGTCGAAACCTATTAACACGGG 59.400 50.000 0.00 0.00 0.00 5.28
271 272 3.500982 TCGTCGAAACCTATTAACACGG 58.499 45.455 0.00 0.00 0.00 4.94
272 273 5.691508 AATCGTCGAAACCTATTAACACG 57.308 39.130 0.00 0.00 0.00 4.49
361 362 0.771755 ACTCTTCCGGGCTCCTTTTT 59.228 50.000 0.00 0.00 0.00 1.94
362 363 0.036875 CACTCTTCCGGGCTCCTTTT 59.963 55.000 0.00 0.00 0.00 2.27
363 364 1.679898 CACTCTTCCGGGCTCCTTT 59.320 57.895 0.00 0.00 0.00 3.11
364 365 2.294078 CCACTCTTCCGGGCTCCTT 61.294 63.158 0.00 0.00 0.00 3.36
365 366 2.685380 CCACTCTTCCGGGCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
366 367 2.593956 AACCACTCTTCCGGGCTCC 61.594 63.158 0.00 0.00 0.00 4.70
367 368 1.376037 CAACCACTCTTCCGGGCTC 60.376 63.158 0.00 0.00 0.00 4.70
368 369 2.750350 CAACCACTCTTCCGGGCT 59.250 61.111 0.00 0.00 0.00 5.19
369 370 3.056328 GCAACCACTCTTCCGGGC 61.056 66.667 0.00 0.00 0.00 6.13
370 371 2.742372 CGCAACCACTCTTCCGGG 60.742 66.667 0.00 0.00 0.00 5.73
371 372 2.742372 CCGCAACCACTCTTCCGG 60.742 66.667 0.00 0.00 0.00 5.14
372 373 1.164041 AAACCGCAACCACTCTTCCG 61.164 55.000 0.00 0.00 0.00 4.30
373 374 1.001706 GAAAACCGCAACCACTCTTCC 60.002 52.381 0.00 0.00 0.00 3.46
374 375 1.673920 TGAAAACCGCAACCACTCTTC 59.326 47.619 0.00 0.00 0.00 2.87
375 376 1.757682 TGAAAACCGCAACCACTCTT 58.242 45.000 0.00 0.00 0.00 2.85
376 377 1.880027 GATGAAAACCGCAACCACTCT 59.120 47.619 0.00 0.00 0.00 3.24
377 378 1.880027 AGATGAAAACCGCAACCACTC 59.120 47.619 0.00 0.00 0.00 3.51
378 379 1.981256 AGATGAAAACCGCAACCACT 58.019 45.000 0.00 0.00 0.00 4.00
379 380 2.793278 AAGATGAAAACCGCAACCAC 57.207 45.000 0.00 0.00 0.00 4.16
380 381 3.810310 AAAAGATGAAAACCGCAACCA 57.190 38.095 0.00 0.00 0.00 3.67
381 382 4.209080 CAGAAAAAGATGAAAACCGCAACC 59.791 41.667 0.00 0.00 0.00 3.77
382 383 5.040635 TCAGAAAAAGATGAAAACCGCAAC 58.959 37.500 0.00 0.00 0.00 4.17
383 384 5.255710 TCAGAAAAAGATGAAAACCGCAA 57.744 34.783 0.00 0.00 0.00 4.85
384 385 4.909696 TCAGAAAAAGATGAAAACCGCA 57.090 36.364 0.00 0.00 0.00 5.69
385 386 4.148871 GCTTCAGAAAAAGATGAAAACCGC 59.851 41.667 0.00 0.00 35.14 5.68
386 387 5.280945 TGCTTCAGAAAAAGATGAAAACCG 58.719 37.500 0.00 0.00 35.14 4.44
387 388 6.507023 TCTGCTTCAGAAAAAGATGAAAACC 58.493 36.000 0.00 0.00 37.57 3.27
388 389 6.640092 CCTCTGCTTCAGAAAAAGATGAAAAC 59.360 38.462 0.00 0.00 40.18 2.43
389 390 6.322201 ACCTCTGCTTCAGAAAAAGATGAAAA 59.678 34.615 0.00 0.00 40.18 2.29
390 391 5.829924 ACCTCTGCTTCAGAAAAAGATGAAA 59.170 36.000 0.00 0.00 40.18 2.69
391 392 5.380043 ACCTCTGCTTCAGAAAAAGATGAA 58.620 37.500 0.00 0.00 40.18 2.57
392 393 4.978099 ACCTCTGCTTCAGAAAAAGATGA 58.022 39.130 0.00 0.00 40.18 2.92
393 394 4.142945 CGACCTCTGCTTCAGAAAAAGATG 60.143 45.833 0.00 0.00 40.18 2.90
394 395 3.999663 CGACCTCTGCTTCAGAAAAAGAT 59.000 43.478 0.00 0.00 40.18 2.40
395 396 3.181465 ACGACCTCTGCTTCAGAAAAAGA 60.181 43.478 0.00 0.00 40.18 2.52
396 397 3.059325 CACGACCTCTGCTTCAGAAAAAG 60.059 47.826 0.00 0.00 40.18 2.27
397 398 2.872245 CACGACCTCTGCTTCAGAAAAA 59.128 45.455 0.00 0.00 40.18 1.94
398 399 2.102420 TCACGACCTCTGCTTCAGAAAA 59.898 45.455 0.00 0.00 40.18 2.29
399 400 1.686587 TCACGACCTCTGCTTCAGAAA 59.313 47.619 0.00 0.00 40.18 2.52
400 401 1.328279 TCACGACCTCTGCTTCAGAA 58.672 50.000 0.00 0.00 40.18 3.02
401 402 1.550327 ATCACGACCTCTGCTTCAGA 58.450 50.000 0.00 0.00 38.25 3.27
402 403 2.376808 AATCACGACCTCTGCTTCAG 57.623 50.000 0.00 0.00 0.00 3.02
403 404 2.839486 AAATCACGACCTCTGCTTCA 57.161 45.000 0.00 0.00 0.00 3.02
404 405 3.330267 AGAAAATCACGACCTCTGCTTC 58.670 45.455 0.00 0.00 0.00 3.86
405 406 3.007398 AGAGAAAATCACGACCTCTGCTT 59.993 43.478 0.00 0.00 33.42 3.91
406 407 2.564947 AGAGAAAATCACGACCTCTGCT 59.435 45.455 0.00 0.00 33.42 4.24
407 408 2.966050 AGAGAAAATCACGACCTCTGC 58.034 47.619 0.00 0.00 33.42 4.26
408 409 7.463383 CGAATAAAGAGAAAATCACGACCTCTG 60.463 40.741 0.00 0.00 34.75 3.35
409 410 6.531948 CGAATAAAGAGAAAATCACGACCTCT 59.468 38.462 0.00 0.00 35.91 3.69
410 411 6.530534 TCGAATAAAGAGAAAATCACGACCTC 59.469 38.462 0.00 0.00 0.00 3.85
411 412 6.395629 TCGAATAAAGAGAAAATCACGACCT 58.604 36.000 0.00 0.00 0.00 3.85
412 413 6.530534 TCTCGAATAAAGAGAAAATCACGACC 59.469 38.462 0.00 0.00 41.29 4.79
413 414 7.507672 TCTCGAATAAAGAGAAAATCACGAC 57.492 36.000 0.00 0.00 41.29 4.34
423 424 9.254133 CATTCTATGCTTTCTCGAATAAAGAGA 57.746 33.333 19.10 12.14 42.39 3.10
424 425 9.039870 ACATTCTATGCTTTCTCGAATAAAGAG 57.960 33.333 19.10 10.55 36.27 2.85
425 426 8.820933 CACATTCTATGCTTTCTCGAATAAAGA 58.179 33.333 19.10 8.44 36.27 2.52
426 427 7.585573 GCACATTCTATGCTTTCTCGAATAAAG 59.414 37.037 13.15 13.15 40.08 1.85
427 428 7.409697 GCACATTCTATGCTTTCTCGAATAAA 58.590 34.615 0.00 0.00 40.08 1.40
428 429 6.948353 GCACATTCTATGCTTTCTCGAATAA 58.052 36.000 0.00 0.00 40.08 1.40
429 430 6.530913 GCACATTCTATGCTTTCTCGAATA 57.469 37.500 0.00 0.00 40.08 1.75
430 431 5.415415 GCACATTCTATGCTTTCTCGAAT 57.585 39.130 0.00 0.00 40.08 3.34
431 432 4.864916 GCACATTCTATGCTTTCTCGAA 57.135 40.909 0.00 0.00 40.08 3.71
445 446 0.371645 CTTCCGCGAGAAGCACATTC 59.628 55.000 19.55 0.00 45.38 2.67
446 447 2.460330 CTTCCGCGAGAAGCACATT 58.540 52.632 19.55 0.00 45.38 2.71
447 448 4.192000 CTTCCGCGAGAAGCACAT 57.808 55.556 19.55 0.00 45.38 3.21
453 454 1.009078 CAATCATGCTTCCGCGAGAA 58.991 50.000 8.23 8.88 39.65 2.87
454 455 0.108186 ACAATCATGCTTCCGCGAGA 60.108 50.000 8.23 0.00 39.65 4.04
455 456 1.258982 GTACAATCATGCTTCCGCGAG 59.741 52.381 8.23 0.00 39.65 5.03
456 457 1.134818 AGTACAATCATGCTTCCGCGA 60.135 47.619 8.23 0.00 39.65 5.87
457 458 1.290203 AGTACAATCATGCTTCCGCG 58.710 50.000 0.00 0.00 39.65 6.46
458 459 2.939103 AGAAGTACAATCATGCTTCCGC 59.061 45.455 0.00 0.00 38.37 5.54
459 460 3.243877 CGAGAAGTACAATCATGCTTCCG 59.756 47.826 0.00 5.47 38.37 4.30
460 461 4.033358 CACGAGAAGTACAATCATGCTTCC 59.967 45.833 0.00 0.00 38.37 3.46
461 462 4.033358 CCACGAGAAGTACAATCATGCTTC 59.967 45.833 0.00 0.00 38.01 3.86
462 463 3.935203 CCACGAGAAGTACAATCATGCTT 59.065 43.478 0.00 0.00 0.00 3.91
463 464 3.195610 TCCACGAGAAGTACAATCATGCT 59.804 43.478 0.00 0.00 0.00 3.79
464 465 3.521560 TCCACGAGAAGTACAATCATGC 58.478 45.455 0.00 0.00 0.00 4.06
465 466 5.709011 CTTCCACGAGAAGTACAATCATG 57.291 43.478 10.54 0.00 45.99 3.07
476 477 1.939934 CAGTTTGTGCTTCCACGAGAA 59.060 47.619 0.00 0.00 45.04 2.87
477 478 1.134521 ACAGTTTGTGCTTCCACGAGA 60.135 47.619 0.00 0.00 45.04 4.04
478 479 1.299541 ACAGTTTGTGCTTCCACGAG 58.700 50.000 0.00 0.00 45.04 4.18
479 480 2.159014 AGTACAGTTTGTGCTTCCACGA 60.159 45.455 0.00 0.00 40.41 4.35
480 481 2.210116 AGTACAGTTTGTGCTTCCACG 58.790 47.619 0.00 0.00 40.41 4.94
486 487 6.449635 TTCATCAAAAGTACAGTTTGTGCT 57.550 33.333 16.94 0.00 45.19 4.40
487 488 6.291796 GCTTTCATCAAAAGTACAGTTTGTGC 60.292 38.462 16.94 11.18 45.23 4.57
488 489 6.751425 TGCTTTCATCAAAAGTACAGTTTGTG 59.249 34.615 16.94 14.65 45.23 3.33
489 490 6.862209 TGCTTTCATCAAAAGTACAGTTTGT 58.138 32.000 16.94 6.62 45.23 2.83
490 491 7.754069 TTGCTTTCATCAAAAGTACAGTTTG 57.246 32.000 13.24 13.24 45.23 2.93
491 492 8.947055 ATTTGCTTTCATCAAAAGTACAGTTT 57.053 26.923 0.00 0.00 45.23 2.66
492 493 9.683069 CTATTTGCTTTCATCAAAAGTACAGTT 57.317 29.630 0.00 0.00 45.23 3.16
493 494 9.066892 TCTATTTGCTTTCATCAAAAGTACAGT 57.933 29.630 0.00 0.00 45.23 3.55
494 495 9.897744 TTCTATTTGCTTTCATCAAAAGTACAG 57.102 29.630 0.00 0.00 45.23 2.74
495 496 9.897744 CTTCTATTTGCTTTCATCAAAAGTACA 57.102 29.630 0.00 0.00 45.23 2.90
496 497 8.854312 GCTTCTATTTGCTTTCATCAAAAGTAC 58.146 33.333 0.09 0.00 45.23 2.73
497 498 8.575589 TGCTTCTATTTGCTTTCATCAAAAGTA 58.424 29.630 0.09 0.00 45.23 2.24
498 499 7.436118 TGCTTCTATTTGCTTTCATCAAAAGT 58.564 30.769 0.09 0.00 45.23 2.66
499 500 7.878477 TGCTTCTATTTGCTTTCATCAAAAG 57.122 32.000 0.00 0.00 46.05 2.27
500 501 9.577110 CTATGCTTCTATTTGCTTTCATCAAAA 57.423 29.630 0.00 0.00 37.04 2.44
501 502 8.959548 TCTATGCTTCTATTTGCTTTCATCAAA 58.040 29.630 0.00 0.00 37.75 2.69
502 503 8.510243 TCTATGCTTCTATTTGCTTTCATCAA 57.490 30.769 0.00 0.00 0.00 2.57
503 504 8.687292 ATCTATGCTTCTATTTGCTTTCATCA 57.313 30.769 0.00 0.00 0.00 3.07
504 505 9.962783 AAATCTATGCTTCTATTTGCTTTCATC 57.037 29.630 0.00 0.00 0.00 2.92
505 506 9.745880 CAAATCTATGCTTCTATTTGCTTTCAT 57.254 29.630 0.00 0.00 33.87 2.57
527 528 4.531940 TTTGCATCCGCGACAAGCAAAT 62.532 45.455 25.44 0.89 46.49 2.32
531 532 0.863119 GATTTGCATCCGCGACAAGC 60.863 55.000 8.23 6.77 42.97 4.01
532 533 0.729116 AGATTTGCATCCGCGACAAG 59.271 50.000 8.23 0.00 42.97 3.16
533 534 0.447406 CAGATTTGCATCCGCGACAA 59.553 50.000 8.23 3.43 42.97 3.18
534 535 0.673333 ACAGATTTGCATCCGCGACA 60.673 50.000 8.23 0.00 42.97 4.35
535 536 0.247814 CACAGATTTGCATCCGCGAC 60.248 55.000 8.23 0.00 42.97 5.19
536 537 1.980951 GCACAGATTTGCATCCGCGA 61.981 55.000 8.23 0.00 42.49 5.87
537 538 1.584483 GCACAGATTTGCATCCGCG 60.584 57.895 0.00 0.00 42.49 6.46
538 539 0.171903 AAGCACAGATTTGCATCCGC 59.828 50.000 0.00 0.00 45.62 5.54
539 540 2.184385 GAAGCACAGATTTGCATCCG 57.816 50.000 0.00 0.00 45.62 4.18
541 542 2.730090 CGTGGAAGCACAGATTTGCATC 60.730 50.000 0.00 0.00 45.62 3.91
542 543 1.200716 CGTGGAAGCACAGATTTGCAT 59.799 47.619 0.00 0.00 45.62 3.96
543 544 0.592637 CGTGGAAGCACAGATTTGCA 59.407 50.000 0.00 0.00 45.62 4.08
544 545 0.874390 TCGTGGAAGCACAGATTTGC 59.126 50.000 0.00 0.00 43.34 3.68
545 546 2.416747 TCTCGTGGAAGCACAGATTTG 58.583 47.619 0.00 0.00 0.00 2.32
546 547 2.839486 TCTCGTGGAAGCACAGATTT 57.161 45.000 0.00 0.00 0.00 2.17
547 548 2.808543 GTTTCTCGTGGAAGCACAGATT 59.191 45.455 0.00 0.00 35.62 2.40
548 549 2.224281 TGTTTCTCGTGGAAGCACAGAT 60.224 45.455 6.41 0.00 39.58 2.90
549 550 1.138069 TGTTTCTCGTGGAAGCACAGA 59.862 47.619 6.41 0.00 39.58 3.41
550 551 1.581934 TGTTTCTCGTGGAAGCACAG 58.418 50.000 6.41 0.00 39.58 3.66
551 552 1.939934 CTTGTTTCTCGTGGAAGCACA 59.060 47.619 9.02 3.41 43.08 4.57
552 553 1.334149 GCTTGTTTCTCGTGGAAGCAC 60.334 52.381 9.02 0.00 43.08 4.40
553 554 0.944386 GCTTGTTTCTCGTGGAAGCA 59.056 50.000 0.00 6.41 42.02 3.91
554 555 0.944386 TGCTTGTTTCTCGTGGAAGC 59.056 50.000 0.00 0.00 39.59 3.86
555 556 1.939934 TGTGCTTGTTTCTCGTGGAAG 59.060 47.619 0.00 0.00 35.16 3.46
556 557 2.031258 TGTGCTTGTTTCTCGTGGAA 57.969 45.000 0.00 0.00 0.00 3.53
557 558 2.254546 ATGTGCTTGTTTCTCGTGGA 57.745 45.000 0.00 0.00 0.00 4.02
558 559 4.685169 AATATGTGCTTGTTTCTCGTGG 57.315 40.909 0.00 0.00 0.00 4.94
559 560 5.451908 ACAAATATGTGCTTGTTTCTCGTG 58.548 37.500 0.00 0.00 38.69 4.35
560 561 5.689383 ACAAATATGTGCTTGTTTCTCGT 57.311 34.783 0.00 0.00 38.69 4.18
601 602 4.037923 AGAATTTTTCCGAAGCACACATGT 59.962 37.500 0.00 0.00 0.00 3.21
602 603 4.549458 AGAATTTTTCCGAAGCACACATG 58.451 39.130 0.00 0.00 0.00 3.21
603 604 4.321230 GGAGAATTTTTCCGAAGCACACAT 60.321 41.667 0.00 0.00 0.00 3.21
604 605 3.004315 GGAGAATTTTTCCGAAGCACACA 59.996 43.478 0.00 0.00 0.00 3.72
605 606 3.004315 TGGAGAATTTTTCCGAAGCACAC 59.996 43.478 1.87 0.00 37.54 3.82
606 607 3.218453 TGGAGAATTTTTCCGAAGCACA 58.782 40.909 1.87 0.00 37.54 4.57
607 608 3.915437 TGGAGAATTTTTCCGAAGCAC 57.085 42.857 1.87 0.00 37.54 4.40
608 609 4.927978 TTTGGAGAATTTTTCCGAAGCA 57.072 36.364 4.83 0.00 37.54 3.91
609 610 6.646653 AGAATTTTGGAGAATTTTTCCGAAGC 59.353 34.615 8.28 4.16 38.88 3.86
610 611 9.346725 CTAGAATTTTGGAGAATTTTTCCGAAG 57.653 33.333 8.28 0.00 38.88 3.79
611 612 8.303876 CCTAGAATTTTGGAGAATTTTTCCGAA 58.696 33.333 4.83 4.83 37.54 4.30
612 613 7.093945 CCCTAGAATTTTGGAGAATTTTTCCGA 60.094 37.037 1.87 0.00 37.54 4.55
613 614 7.035612 CCCTAGAATTTTGGAGAATTTTTCCG 58.964 38.462 1.87 0.00 37.54 4.30
614 615 8.134202 TCCCTAGAATTTTGGAGAATTTTTCC 57.866 34.615 0.00 0.00 35.20 3.13
621 622 9.632638 CTTCATATTCCCTAGAATTTTGGAGAA 57.367 33.333 0.00 0.00 39.83 2.87
622 623 7.721399 GCTTCATATTCCCTAGAATTTTGGAGA 59.279 37.037 0.00 0.00 39.83 3.71
623 624 7.503566 TGCTTCATATTCCCTAGAATTTTGGAG 59.496 37.037 0.00 0.00 39.83 3.86
624 625 7.353525 TGCTTCATATTCCCTAGAATTTTGGA 58.646 34.615 0.00 0.00 39.83 3.53
625 626 7.587037 TGCTTCATATTCCCTAGAATTTTGG 57.413 36.000 0.00 0.00 39.83 3.28
626 627 9.874205 TTTTGCTTCATATTCCCTAGAATTTTG 57.126 29.630 0.00 0.00 39.83 2.44
627 628 9.875691 GTTTTGCTTCATATTCCCTAGAATTTT 57.124 29.630 0.00 0.00 39.83 1.82
628 629 8.478066 GGTTTTGCTTCATATTCCCTAGAATTT 58.522 33.333 0.00 0.00 39.83 1.82
629 630 7.069950 GGGTTTTGCTTCATATTCCCTAGAATT 59.930 37.037 0.00 0.00 39.83 2.17
630 631 6.551227 GGGTTTTGCTTCATATTCCCTAGAAT 59.449 38.462 0.00 0.00 44.95 2.40
631 632 5.891551 GGGTTTTGCTTCATATTCCCTAGAA 59.108 40.000 0.00 0.00 36.15 2.10
632 633 5.044476 TGGGTTTTGCTTCATATTCCCTAGA 60.044 40.000 0.00 0.00 35.20 2.43
633 634 5.200483 TGGGTTTTGCTTCATATTCCCTAG 58.800 41.667 0.00 0.00 35.20 3.02
634 635 5.199982 TGGGTTTTGCTTCATATTCCCTA 57.800 39.130 0.00 0.00 35.20 3.53
635 636 4.059773 TGGGTTTTGCTTCATATTCCCT 57.940 40.909 0.00 0.00 35.20 4.20
636 637 4.817318 TTGGGTTTTGCTTCATATTCCC 57.183 40.909 0.00 0.00 34.77 3.97
637 638 4.631377 GCTTTGGGTTTTGCTTCATATTCC 59.369 41.667 0.00 0.00 0.00 3.01
638 639 4.631377 GGCTTTGGGTTTTGCTTCATATTC 59.369 41.667 0.00 0.00 0.00 1.75
639 640 4.565444 GGGCTTTGGGTTTTGCTTCATATT 60.565 41.667 0.00 0.00 0.00 1.28
640 641 3.055167 GGGCTTTGGGTTTTGCTTCATAT 60.055 43.478 0.00 0.00 0.00 1.78
641 642 2.301583 GGGCTTTGGGTTTTGCTTCATA 59.698 45.455 0.00 0.00 0.00 2.15
642 643 1.072173 GGGCTTTGGGTTTTGCTTCAT 59.928 47.619 0.00 0.00 0.00 2.57
643 644 0.467804 GGGCTTTGGGTTTTGCTTCA 59.532 50.000 0.00 0.00 0.00 3.02
644 645 0.758734 AGGGCTTTGGGTTTTGCTTC 59.241 50.000 0.00 0.00 0.00 3.86
645 646 1.691976 GTAGGGCTTTGGGTTTTGCTT 59.308 47.619 0.00 0.00 0.00 3.91
646 647 1.133167 AGTAGGGCTTTGGGTTTTGCT 60.133 47.619 0.00 0.00 0.00 3.91
647 648 1.000843 CAGTAGGGCTTTGGGTTTTGC 59.999 52.381 0.00 0.00 0.00 3.68
648 649 2.316108 ACAGTAGGGCTTTGGGTTTTG 58.684 47.619 0.00 0.00 0.00 2.44
649 650 2.767644 ACAGTAGGGCTTTGGGTTTT 57.232 45.000 0.00 0.00 0.00 2.43
650 651 3.499745 CCTTACAGTAGGGCTTTGGGTTT 60.500 47.826 0.00 0.00 0.00 3.27
651 652 2.041216 CCTTACAGTAGGGCTTTGGGTT 59.959 50.000 0.00 0.00 0.00 4.11
652 653 1.633945 CCTTACAGTAGGGCTTTGGGT 59.366 52.381 0.00 0.00 0.00 4.51
653 654 1.633945 ACCTTACAGTAGGGCTTTGGG 59.366 52.381 8.68 0.00 39.76 4.12
654 655 2.355818 GGACCTTACAGTAGGGCTTTGG 60.356 54.545 8.68 0.00 43.40 3.28
655 656 2.304761 TGGACCTTACAGTAGGGCTTTG 59.695 50.000 8.68 0.00 43.40 2.77
656 657 2.627933 TGGACCTTACAGTAGGGCTTT 58.372 47.619 8.68 0.00 43.40 3.51
657 658 2.305052 GTTGGACCTTACAGTAGGGCTT 59.695 50.000 8.68 0.00 43.40 4.35
658 659 1.907255 GTTGGACCTTACAGTAGGGCT 59.093 52.381 8.68 0.00 43.40 5.19
659 660 1.626825 TGTTGGACCTTACAGTAGGGC 59.373 52.381 8.68 1.34 43.13 5.19
660 661 2.635915 TGTGTTGGACCTTACAGTAGGG 59.364 50.000 7.20 7.20 39.76 3.53
661 662 3.576982 TCTGTGTTGGACCTTACAGTAGG 59.423 47.826 17.18 0.00 40.91 3.18
662 663 4.038763 TGTCTGTGTTGGACCTTACAGTAG 59.961 45.833 17.18 11.35 40.91 2.57
663 664 3.962063 TGTCTGTGTTGGACCTTACAGTA 59.038 43.478 17.18 9.37 40.91 2.74
664 665 2.769663 TGTCTGTGTTGGACCTTACAGT 59.230 45.455 17.18 0.00 40.91 3.55
665 666 3.069586 TCTGTCTGTGTTGGACCTTACAG 59.930 47.826 13.72 13.72 41.34 2.74
666 667 3.035363 TCTGTCTGTGTTGGACCTTACA 58.965 45.455 0.00 0.00 33.22 2.41
667 668 3.321111 TCTCTGTCTGTGTTGGACCTTAC 59.679 47.826 0.00 0.00 33.22 2.34
668 669 3.572642 TCTCTGTCTGTGTTGGACCTTA 58.427 45.455 0.00 0.00 33.22 2.69
669 670 2.398588 TCTCTGTCTGTGTTGGACCTT 58.601 47.619 0.00 0.00 33.22 3.50
670 671 2.088104 TCTCTGTCTGTGTTGGACCT 57.912 50.000 0.00 0.00 33.22 3.85
671 672 4.537135 TTATCTCTGTCTGTGTTGGACC 57.463 45.455 0.00 0.00 33.22 4.46
672 673 6.861065 TTTTTATCTCTGTCTGTGTTGGAC 57.139 37.500 0.00 0.00 0.00 4.02
694 695 8.519799 TTATCTCTGTCAGGTTTCAACTTTTT 57.480 30.769 0.00 0.00 0.00 1.94
695 696 8.697507 ATTATCTCTGTCAGGTTTCAACTTTT 57.302 30.769 0.00 0.00 0.00 2.27
696 697 9.793259 TTATTATCTCTGTCAGGTTTCAACTTT 57.207 29.630 0.00 0.00 0.00 2.66
697 698 9.965902 ATTATTATCTCTGTCAGGTTTCAACTT 57.034 29.630 0.00 0.00 0.00 2.66
698 699 9.388506 CATTATTATCTCTGTCAGGTTTCAACT 57.611 33.333 0.00 0.00 0.00 3.16
699 700 9.167311 ACATTATTATCTCTGTCAGGTTTCAAC 57.833 33.333 0.00 0.00 0.00 3.18
700 701 9.383519 GACATTATTATCTCTGTCAGGTTTCAA 57.616 33.333 0.00 0.00 38.28 2.69
701 702 8.539544 TGACATTATTATCTCTGTCAGGTTTCA 58.460 33.333 0.00 0.00 42.12 2.69
702 703 8.948631 TGACATTATTATCTCTGTCAGGTTTC 57.051 34.615 0.00 0.00 42.12 2.78
782 783 1.595382 CTGGGCCGATTCGTCCATC 60.595 63.158 8.56 0.00 30.78 3.51
822 828 3.834799 GTACGCTAGCTGGGCCGT 61.835 66.667 13.93 7.77 0.00 5.68
840 846 6.374578 GTTCAGAGAAACAAAAGACCATAGC 58.625 40.000 0.00 0.00 0.00 2.97
844 850 3.625764 CGGTTCAGAGAAACAAAAGACCA 59.374 43.478 0.00 0.00 0.00 4.02
851 857 2.940410 GTGGAACGGTTCAGAGAAACAA 59.060 45.455 21.36 0.00 0.00 2.83
899 905 4.742201 CCTCACCGCCACCACTCG 62.742 72.222 0.00 0.00 0.00 4.18
918 928 3.320541 CGCCTTGATCTCATCTACCTTCT 59.679 47.826 0.00 0.00 0.00 2.85
1042 1054 2.527624 AGCAGCCAGGTGGAGTGA 60.528 61.111 0.00 0.00 37.39 3.41
1086 1106 2.740714 GCCATTGTCGACGTGGAGC 61.741 63.158 32.11 19.36 34.94 4.70
1089 1109 3.487202 CGGCCATTGTCGACGTGG 61.487 66.667 26.73 26.73 43.95 4.94
1223 1243 3.583086 ACAGTGCAAGTAACCTATGGTCT 59.417 43.478 0.00 0.00 33.12 3.85
1226 1246 4.685169 CAACAGTGCAAGTAACCTATGG 57.315 45.455 0.00 0.00 0.00 2.74
1250 1270 2.332514 CAAACTGGCAGTGCGGTG 59.667 61.111 22.83 13.07 0.00 4.94
1251 1271 3.595758 GCAAACTGGCAGTGCGGT 61.596 61.111 22.83 1.54 0.00 5.68
1252 1272 4.347453 GGCAAACTGGCAGTGCGG 62.347 66.667 22.83 14.43 43.14 5.69
1259 1279 2.180017 CAGCGATGGCAAACTGGC 59.820 61.111 1.50 0.00 43.41 4.85
1260 1280 2.180017 GCAGCGATGGCAAACTGG 59.820 61.111 1.46 0.00 43.41 4.00
1261 1281 2.180017 GGCAGCGATGGCAAACTG 59.820 61.111 23.35 9.62 43.41 3.16
1262 1282 3.434319 CGGCAGCGATGGCAAACT 61.434 61.111 27.19 0.00 43.41 2.66
1263 1283 3.737172 ACGGCAGCGATGGCAAAC 61.737 61.111 27.19 0.00 43.41 2.93
1264 1284 3.736100 CACGGCAGCGATGGCAAA 61.736 61.111 27.19 0.00 43.41 3.68
1307 1327 4.547905 CGTCACGATCGGGACCGG 62.548 72.222 37.33 24.29 45.12 5.28
1319 1339 1.398451 CCATCAACAAGAACGCGTCAC 60.398 52.381 14.44 10.51 0.00 3.67
1333 1353 1.001764 CCTCAGCTGCCACCATCAA 60.002 57.895 9.47 0.00 0.00 2.57
1334 1354 2.672908 CCTCAGCTGCCACCATCA 59.327 61.111 9.47 0.00 0.00 3.07
1335 1355 2.827642 GCCTCAGCTGCCACCATC 60.828 66.667 9.47 0.00 35.50 3.51
1769 1800 0.107848 ATGTACCGTACCTTGGCTGC 60.108 55.000 6.23 0.00 0.00 5.25
1788 1822 1.735973 CATCGATGGACGGAGCTCA 59.264 57.895 17.96 0.00 42.82 4.26
1803 1837 0.533531 TGTGATGGCCTCGATGCATC 60.534 55.000 17.10 17.10 0.00 3.91
1806 1840 0.309922 CAATGTGATGGCCTCGATGC 59.690 55.000 3.32 3.83 0.00 3.91
1813 1851 1.108776 ACTGATGCAATGTGATGGCC 58.891 50.000 0.00 0.00 0.00 5.36
1819 1857 3.001026 GTCGAGATCACTGATGCAATGTG 59.999 47.826 9.80 9.80 0.00 3.21
1824 1862 1.135721 CAGGTCGAGATCACTGATGCA 59.864 52.381 0.00 0.00 32.86 3.96
1828 1866 2.489722 CTCAACAGGTCGAGATCACTGA 59.510 50.000 0.00 0.00 35.08 3.41
1829 1867 2.230025 ACTCAACAGGTCGAGATCACTG 59.770 50.000 0.00 0.00 37.01 3.66
1830 1868 2.230025 CACTCAACAGGTCGAGATCACT 59.770 50.000 0.00 0.00 33.33 3.41
1841 1879 0.249447 TGCAGTCGACACTCAACAGG 60.249 55.000 19.50 0.00 0.00 4.00
1843 1881 2.017138 TTTGCAGTCGACACTCAACA 57.983 45.000 19.50 3.30 0.00 3.33
1844 1882 3.242739 ACATTTTGCAGTCGACACTCAAC 60.243 43.478 19.50 0.53 0.00 3.18
1845 1883 2.942376 ACATTTTGCAGTCGACACTCAA 59.058 40.909 19.50 14.66 0.00 3.02
1846 1884 2.560504 ACATTTTGCAGTCGACACTCA 58.439 42.857 19.50 9.24 0.00 3.41
1847 1885 3.493129 TGTACATTTTGCAGTCGACACTC 59.507 43.478 19.50 6.55 0.00 3.51
1848 1886 3.247648 GTGTACATTTTGCAGTCGACACT 59.752 43.478 19.50 0.00 34.51 3.55
1849 1887 3.247648 AGTGTACATTTTGCAGTCGACAC 59.752 43.478 19.50 10.06 36.94 3.67
1866 1904 1.204704 CTCGATCAGGGTTGCAGTGTA 59.795 52.381 0.00 0.00 0.00 2.90
1881 1919 2.119801 AATGGTTTCAGCAGCTCGAT 57.880 45.000 0.00 0.00 0.00 3.59
1886 1924 3.110447 TGGAAAAATGGTTTCAGCAGC 57.890 42.857 1.63 0.00 0.00 5.25
1903 1941 3.553904 TGCGATCATCATTTCCAATGGA 58.446 40.909 0.00 0.00 0.00 3.41
1913 1951 3.464907 CTTCTTCACCTGCGATCATCAT 58.535 45.455 0.00 0.00 0.00 2.45
1914 1952 2.897436 CTTCTTCACCTGCGATCATCA 58.103 47.619 0.00 0.00 0.00 3.07
1915 1953 1.596727 GCTTCTTCACCTGCGATCATC 59.403 52.381 0.00 0.00 0.00 2.92
2040 2078 5.584649 TGGTGAGTTCATCCGTTCATTAATC 59.415 40.000 0.00 0.00 0.00 1.75
2043 2081 4.545208 TGGTGAGTTCATCCGTTCATTA 57.455 40.909 0.00 0.00 0.00 1.90
2048 2086 3.750371 TCAAATGGTGAGTTCATCCGTT 58.250 40.909 0.00 0.00 31.96 4.44
2056 2094 7.009179 TCAAGTAGAGATCAAATGGTGAGTT 57.991 36.000 0.00 0.00 40.43 3.01
2057 2095 6.611613 TCAAGTAGAGATCAAATGGTGAGT 57.388 37.500 0.00 0.00 40.43 3.41
2072 2110 7.337938 TGGCACATTCTAATTCATCAAGTAGA 58.662 34.615 0.00 0.00 37.41 2.59
2197 2267 5.236047 GCACTCTCAGAAGGCAAACATATAG 59.764 44.000 0.00 0.00 0.00 1.31
2241 3660 8.730680 ACTAGCACAATAGAACAAACTTATTGG 58.269 33.333 7.96 0.50 33.73 3.16
2287 3706 3.476552 GTGGATCCACAAGTGACTTTGA 58.523 45.455 35.21 0.00 45.53 2.69
2301 3720 2.832129 TCTTCTAGTGTGTGGTGGATCC 59.168 50.000 4.20 4.20 0.00 3.36
2337 3766 9.454859 ACTAAAGAAACTGGATCTATTGGAAAG 57.545 33.333 0.00 0.00 0.00 2.62
2341 3770 6.768381 GGGACTAAAGAAACTGGATCTATTGG 59.232 42.308 0.00 0.00 0.00 3.16
2343 3772 6.383147 TCGGGACTAAAGAAACTGGATCTATT 59.617 38.462 0.00 0.00 0.00 1.73
2363 3792 1.480954 GATCCTACTGTTGCTTCGGGA 59.519 52.381 0.00 0.00 0.00 5.14
2367 3796 3.064545 GTGCATGATCCTACTGTTGCTTC 59.935 47.826 0.00 0.00 0.00 3.86
2368 3797 3.012518 GTGCATGATCCTACTGTTGCTT 58.987 45.455 0.00 0.00 0.00 3.91
2372 3801 4.833478 AAGAGTGCATGATCCTACTGTT 57.167 40.909 0.00 0.00 0.00 3.16
2375 3804 3.963374 TGCTAAGAGTGCATGATCCTACT 59.037 43.478 0.00 0.00 35.31 2.57
2390 3819 2.373836 TGCCCTTAGGTTGTTGCTAAGA 59.626 45.455 0.00 0.00 33.79 2.10
2392 3821 2.510613 GTGCCCTTAGGTTGTTGCTAA 58.489 47.619 0.00 0.00 34.57 3.09
2396 3825 0.958822 GTGGTGCCCTTAGGTTGTTG 59.041 55.000 0.00 0.00 34.57 3.33
2401 3830 1.145571 TTTCTGTGGTGCCCTTAGGT 58.854 50.000 0.00 0.00 34.57 3.08
2412 3841 4.021104 TCCTGATGTAGTCTGTTTCTGTGG 60.021 45.833 0.00 0.00 0.00 4.17
2453 3882 4.607293 TCATGATATCGCTTTAGGCAGT 57.393 40.909 0.00 0.00 41.91 4.40
2493 3924 8.757982 ATCTTGCATTTACATTCTCTAATGGT 57.242 30.769 3.41 0.00 45.72 3.55
2494 3925 9.674824 GAATCTTGCATTTACATTCTCTAATGG 57.325 33.333 3.41 0.00 45.72 3.16
2510 3941 2.756760 AGGCAACGATTGAATCTTGCAT 59.243 40.909 27.24 22.62 41.20 3.96
2511 3942 2.161855 AGGCAACGATTGAATCTTGCA 58.838 42.857 27.24 0.00 41.20 4.08
2512 3943 2.927553 AGGCAACGATTGAATCTTGC 57.072 45.000 22.56 22.56 46.39 4.01
2513 3944 5.801350 TCTTAGGCAACGATTGAATCTTG 57.199 39.130 3.43 7.98 46.39 3.02
2514 3945 7.121168 TCAAATCTTAGGCAACGATTGAATCTT 59.879 33.333 3.43 0.00 46.39 2.40
2516 3947 6.785191 TCAAATCTTAGGCAACGATTGAATC 58.215 36.000 0.00 0.00 46.39 2.52
2517 3948 6.757897 TCAAATCTTAGGCAACGATTGAAT 57.242 33.333 0.00 0.00 46.39 2.57
2518 3949 6.757897 ATCAAATCTTAGGCAACGATTGAA 57.242 33.333 0.00 0.00 46.39 2.69
2519 3950 6.757897 AATCAAATCTTAGGCAACGATTGA 57.242 33.333 0.00 0.00 46.39 2.57
2520 3951 7.028962 TGAAATCAAATCTTAGGCAACGATTG 58.971 34.615 0.00 0.00 46.39 2.67
2521 3952 7.156876 TGAAATCAAATCTTAGGCAACGATT 57.843 32.000 0.00 0.00 46.39 3.34
2522 3953 6.757897 TGAAATCAAATCTTAGGCAACGAT 57.242 33.333 0.00 0.00 46.39 3.73
2523 3954 6.567687 TTGAAATCAAATCTTAGGCAACGA 57.432 33.333 0.00 0.00 35.32 3.85
2524 3955 7.816945 AATTGAAATCAAATCTTAGGCAACG 57.183 32.000 0.00 0.00 40.02 4.10
2525 3956 9.206870 TGAAATTGAAATCAAATCTTAGGCAAC 57.793 29.630 0.00 0.00 39.55 4.17
2526 3957 9.947433 ATGAAATTGAAATCAAATCTTAGGCAA 57.053 25.926 0.00 0.00 39.55 4.52
2545 3976 5.717078 AATGCCGATGCTCATATGAAATT 57.283 34.783 6.90 0.00 38.71 1.82
2550 3981 3.603532 ACCTAATGCCGATGCTCATATG 58.396 45.455 0.00 0.00 38.71 1.78
2563 3994 8.268850 TCTTATCTTCAAGTGAAACCTAATGC 57.731 34.615 0.00 0.00 37.80 3.56
2612 4043 0.832983 AATGTTGGGCATGCCTGTGT 60.833 50.000 34.70 15.42 37.96 3.72
2615 4046 2.828877 CATTAATGTTGGGCATGCCTG 58.171 47.619 34.70 18.49 37.96 4.85
2617 4048 1.134461 TGCATTAATGTTGGGCATGCC 60.134 47.619 29.47 29.47 37.96 4.40
2684 4115 6.220930 TGTCGCTCAATAGTTTCTTGTACTT 58.779 36.000 0.00 0.00 0.00 2.24
2695 4126 4.294232 CTCGATGAATGTCGCTCAATAGT 58.706 43.478 0.00 0.00 41.22 2.12
2710 4141 3.519510 GGGGGAAATCATATCCTCGATGA 59.480 47.826 0.00 0.00 38.42 2.92
2728 4159 4.104102 TCTGCCTGTTGTTTATATAGGGGG 59.896 45.833 0.00 0.00 0.00 5.40
2773 4205 2.024414 AGTTGTGTTGGCAAGTCCTTC 58.976 47.619 0.00 0.00 35.26 3.46
2792 4225 9.770097 TGCCATGAAGAGAATAGTCTATTTAAG 57.230 33.333 6.56 0.00 35.44 1.85
2810 4243 0.113972 TGGTTGATGGGTGCCATGAA 59.886 50.000 0.00 0.00 45.26 2.57
2822 4255 1.331214 CTTGTGTTGCCCTGGTTGAT 58.669 50.000 0.00 0.00 0.00 2.57
2842 4275 1.251251 AAGCAACAGCCATGGTTCTC 58.749 50.000 14.67 0.00 33.53 2.87
2854 4287 3.761218 TCACAAGGACAAGAAAAGCAACA 59.239 39.130 0.00 0.00 0.00 3.33
2855 4288 4.370364 TCACAAGGACAAGAAAAGCAAC 57.630 40.909 0.00 0.00 0.00 4.17
2863 4296 2.705658 AGACACCATCACAAGGACAAGA 59.294 45.455 0.00 0.00 0.00 3.02
2877 4310 1.227823 CCCGCACAAGAAGACACCA 60.228 57.895 0.00 0.00 0.00 4.17
2878 4311 1.227853 ACCCGCACAAGAAGACACC 60.228 57.895 0.00 0.00 0.00 4.16
2897 4330 5.980116 CGTAGAAGAAGACATCACCATAAGG 59.020 44.000 0.00 0.00 42.21 2.69
2946 4379 6.238842 CCATTGCTTTACTGGTCCTTATGATG 60.239 42.308 0.00 0.00 0.00 3.07
2959 4392 2.102578 GACCATGGCCATTGCTTTACT 58.897 47.619 17.92 0.00 37.74 2.24
3003 4436 0.038343 GACAACAATGGCGTGGCATT 60.038 50.000 15.06 15.06 0.00 3.56
3005 4438 2.560119 GGACAACAATGGCGTGGCA 61.560 57.895 0.00 0.00 34.32 4.92
3006 4439 2.258286 GGACAACAATGGCGTGGC 59.742 61.111 0.00 0.00 34.32 5.01
3007 4440 2.961768 GGGACAACAATGGCGTGG 59.038 61.111 0.00 0.00 34.32 4.94
3008 4441 2.560861 CGGGACAACAATGGCGTG 59.439 61.111 0.00 0.00 34.32 5.34
3009 4442 3.361977 GCGGGACAACAATGGCGT 61.362 61.111 0.00 0.00 34.32 5.68
3010 4443 4.114997 GGCGGGACAACAATGGCG 62.115 66.667 0.00 0.00 34.32 5.69
3011 4444 4.114997 CGGCGGGACAACAATGGC 62.115 66.667 0.00 0.00 0.00 4.40
3012 4445 2.265182 AACGGCGGGACAACAATGG 61.265 57.895 13.24 0.00 0.00 3.16
3013 4446 1.081509 CAACGGCGGGACAACAATG 60.082 57.895 13.24 0.00 0.00 2.82
3014 4447 1.512156 GACAACGGCGGGACAACAAT 61.512 55.000 13.24 0.00 0.00 2.71
3015 4448 2.124653 ACAACGGCGGGACAACAA 60.125 55.556 13.24 0.00 0.00 2.83
3016 4449 2.589442 GACAACGGCGGGACAACA 60.589 61.111 13.24 0.00 0.00 3.33
3017 4450 1.512156 AATGACAACGGCGGGACAAC 61.512 55.000 13.24 0.00 0.00 3.32
3018 4451 1.228003 AATGACAACGGCGGGACAA 60.228 52.632 13.24 0.00 0.00 3.18
3019 4452 1.963855 CAATGACAACGGCGGGACA 60.964 57.895 13.24 10.16 0.00 4.02
3020 4453 2.867472 CAATGACAACGGCGGGAC 59.133 61.111 13.24 3.98 0.00 4.46
3023 4456 1.442520 CTTGCAATGACAACGGCGG 60.443 57.895 13.24 0.00 0.00 6.13
3045 4478 4.768968 AGCCAAGCAAATGTCTGTATTTCT 59.231 37.500 0.00 0.00 0.00 2.52
3052 4485 5.472148 TGATTTTAGCCAAGCAAATGTCTG 58.528 37.500 0.00 0.00 0.00 3.51
3060 4493 7.039082 ACCTTTAGAAATGATTTTAGCCAAGCA 60.039 33.333 0.00 0.00 0.00 3.91
3087 4520 1.818363 GGATCCTTCCGCGGTTTCC 60.818 63.158 27.15 19.65 30.72 3.13
3106 4539 0.473755 ATACGGCATGCTTGGATGGA 59.526 50.000 18.92 0.00 0.00 3.41
3117 4550 0.751643 GGCCCTTGACAATACGGCAT 60.752 55.000 17.88 0.00 41.58 4.40
3163 4603 6.100004 AGTGTTAAACGAGATGTGATGTAGG 58.900 40.000 0.00 0.00 0.00 3.18
3170 4610 7.740346 GTGATTGTTAGTGTTAAACGAGATGTG 59.260 37.037 0.00 0.00 0.00 3.21
3178 4618 6.866248 CCCAATGGTGATTGTTAGTGTTAAAC 59.134 38.462 0.00 0.00 37.82 2.01
3181 4621 5.636123 ACCCAATGGTGATTGTTAGTGTTA 58.364 37.500 0.00 0.00 45.58 2.41
3234 4676 2.494918 GTAGAGCCGTCCGTGCAT 59.505 61.111 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.