Multiple sequence alignment - TraesCS7D01G049400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G049400 chr7D 100.000 5304 0 0 1 5304 25339711 25334408 0.000000e+00 9795.0
1 TraesCS7D01G049400 chr7D 98.833 257 3 0 5048 5304 25328557 25328301 4.840000e-125 459.0
2 TraesCS7D01G049400 chr7D 81.725 487 34 24 374 860 25346280 25345849 6.530000e-94 355.0
3 TraesCS7D01G049400 chr7A 88.882 3112 246 54 1501 4568 26242438 26239383 0.000000e+00 3738.0
4 TraesCS7D01G049400 chr7A 87.010 1147 78 36 1 1134 26244112 26243024 0.000000e+00 1227.0
5 TraesCS7D01G049400 chr7A 95.370 324 14 1 1177 1499 26242941 26242618 1.020000e-141 514.0
6 TraesCS7D01G049400 chr7A 79.275 579 89 17 4744 5304 26179716 26179151 5.020000e-100 375.0
7 TraesCS7D01G049400 chr7A 88.142 253 30 0 1184 1436 26105504 26105252 8.630000e-78 302.0
8 TraesCS7D01G049400 chr7A 80.966 352 32 20 511 860 26296412 26296094 4.100000e-61 246.0
9 TraesCS7D01G049400 chr7A 89.394 66 7 0 1047 1112 26105653 26105588 3.400000e-12 84.2
10 TraesCS7D01G049400 chr7A 82.759 87 7 6 372 458 26296488 26296410 2.650000e-08 71.3
11 TraesCS7D01G049400 chr4A 89.587 1767 171 9 2809 4568 709717825 709716065 0.000000e+00 2231.0
12 TraesCS7D01G049400 chr4A 93.596 1093 64 6 4215 5304 709714222 709713133 0.000000e+00 1626.0
13 TraesCS7D01G049400 chr4A 78.465 1472 263 25 2828 4282 709614009 709612575 0.000000e+00 913.0
14 TraesCS7D01G049400 chr4A 78.178 1471 269 23 2828 4282 709567559 709566125 0.000000e+00 891.0
15 TraesCS7D01G049400 chr4A 78.148 1469 261 29 2828 4276 709273602 709272174 0.000000e+00 880.0
16 TraesCS7D01G049400 chr4A 78.042 1471 271 23 2828 4282 709419932 709418498 0.000000e+00 880.0
17 TraesCS7D01G049400 chr4A 87.218 798 49 25 706 1472 709721848 709721073 0.000000e+00 859.0
18 TraesCS7D01G049400 chr4A 88.496 678 48 13 1 667 709722501 709721843 0.000000e+00 793.0
19 TraesCS7D01G049400 chr4A 88.978 626 37 17 878 1472 709720699 709720075 0.000000e+00 745.0
20 TraesCS7D01G049400 chr4A 84.288 681 63 22 1704 2357 709719392 709718729 4.510000e-175 625.0
21 TraesCS7D01G049400 chr4A 89.388 245 26 0 1192 1436 709275644 709275400 5.160000e-80 309.0
22 TraesCS7D01G049400 chr4A 89.388 245 26 0 1192 1436 709421976 709421732 5.160000e-80 309.0
23 TraesCS7D01G049400 chr4A 89.388 245 26 0 1192 1436 709569602 709569358 5.160000e-80 309.0
24 TraesCS7D01G049400 chr4A 89.388 245 26 0 1192 1436 709616048 709615804 5.160000e-80 309.0
25 TraesCS7D01G049400 chr4A 77.273 352 62 16 2389 2730 709568155 709567812 1.950000e-44 191.0
26 TraesCS7D01G049400 chr4A 76.989 352 63 16 2389 2730 709274198 709273855 9.070000e-43 185.0
27 TraesCS7D01G049400 chr4A 92.969 128 8 1 734 860 709736517 709736390 9.070000e-43 185.0
28 TraesCS7D01G049400 chr4A 76.608 342 62 16 2389 2721 709614603 709614271 7.060000e-39 172.0
29 TraesCS7D01G049400 chr4A 93.396 106 3 2 511 616 709736660 709736559 2.560000e-33 154.0
30 TraesCS7D01G049400 chr4A 82.609 92 8 3 367 458 709736741 709736658 2.050000e-09 75.0
31 TraesCS7D01G049400 chr5D 82.249 738 108 10 3561 4276 246657565 246658301 2.710000e-172 616.0
32 TraesCS7D01G049400 chr5D 79.115 565 113 5 2828 3391 246656845 246657405 8.330000e-103 385.0
33 TraesCS7D01G049400 chr5A 82.114 738 109 14 3561 4276 330505149 330505885 1.260000e-170 610.0
34 TraesCS7D01G049400 chr5B 82.003 739 108 13 3561 4276 281106405 281107141 5.880000e-169 604.0
35 TraesCS7D01G049400 chr5B 79.787 564 111 1 2828 3391 281105685 281106245 1.780000e-109 407.0
36 TraesCS7D01G049400 chrUn 89.958 239 24 0 1192 1430 346600295 346600533 5.160000e-80 309.0
37 TraesCS7D01G049400 chrUn 77.259 343 60 16 2389 2721 350559916 350560250 9.070000e-43 185.0
38 TraesCS7D01G049400 chr6A 94.017 117 3 3 746 862 38556635 38556523 1.960000e-39 174.0
39 TraesCS7D01G049400 chr6A 92.982 114 6 2 746 857 55551268 55551381 1.180000e-36 165.0
40 TraesCS7D01G049400 chr4B 95.327 107 1 4 752 857 559287194 559287091 3.290000e-37 167.0
41 TraesCS7D01G049400 chr3D 95.283 106 2 3 751 856 498113518 498113620 1.180000e-36 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G049400 chr7D 25334408 25339711 5303 True 9795.000000 9795 100.000000 1 5304 1 chr7D.!!$R2 5303
1 TraesCS7D01G049400 chr7A 26239383 26244112 4729 True 1826.333333 3738 90.420667 1 4568 3 chr7A.!!$R3 4567
2 TraesCS7D01G049400 chr7A 26179151 26179716 565 True 375.000000 375 79.275000 4744 5304 1 chr7A.!!$R1 560
3 TraesCS7D01G049400 chr4A 709713133 709722501 9368 True 1146.500000 2231 88.693833 1 5304 6 chr4A.!!$R5 5303
4 TraesCS7D01G049400 chr4A 709418498 709421976 3478 True 594.500000 880 83.715000 1192 4282 2 chr4A.!!$R2 3090
5 TraesCS7D01G049400 chr4A 709612575 709616048 3473 True 464.666667 913 81.487000 1192 4282 3 chr4A.!!$R4 3090
6 TraesCS7D01G049400 chr4A 709566125 709569602 3477 True 463.666667 891 81.613000 1192 4282 3 chr4A.!!$R3 3090
7 TraesCS7D01G049400 chr4A 709272174 709275644 3470 True 458.000000 880 81.508333 1192 4276 3 chr4A.!!$R1 3084
8 TraesCS7D01G049400 chr5D 246656845 246658301 1456 False 500.500000 616 80.682000 2828 4276 2 chr5D.!!$F1 1448
9 TraesCS7D01G049400 chr5A 330505149 330505885 736 False 610.000000 610 82.114000 3561 4276 1 chr5A.!!$F1 715
10 TraesCS7D01G049400 chr5B 281105685 281107141 1456 False 505.500000 604 80.895000 2828 4276 2 chr5B.!!$F1 1448

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
834 847 0.656259 CGAATCTCTCAGGCGTCGTA 59.344 55.0 0.0 0.0 0.00 3.43 F
1510 2855 0.511653 GAGGTTGCGTTTCCGAGTTC 59.488 55.0 0.0 0.0 35.63 3.01 F
2336 5139 0.873054 CTGGATGCATTCGCTGATCC 59.127 55.0 0.0 0.0 39.64 3.36 F
3308 6708 0.176680 CTAGCATCCAAGTCGGCACT 59.823 55.0 0.0 0.0 33.14 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2080 4598 2.290071 TGACCGAAAAATGGGAGGAGAC 60.290 50.0 0.00 0.0 0.0 3.36 R
2951 6348 0.886490 GGAAGATGGCGGCATACAGG 60.886 60.0 25.86 0.0 0.0 4.00 R
3802 7232 0.178921 TGTGCCAGAGAGGGAAGACT 60.179 55.0 0.00 0.0 40.6 3.24 R
4885 10544 0.383231 CGGCATTCAAATCCAGGCTC 59.617 55.0 0.00 0.0 0.0 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 4.083110 CCTGATACAAAAGGTTCTGCACAG 60.083 45.833 0.00 0.00 0.00 3.66
119 120 6.239064 CGTATATTGGAGAGAAACTAGCAGGT 60.239 42.308 0.00 0.00 0.00 4.00
142 143 4.630069 TCAACTAAGCTCATTTTCGCCTAC 59.370 41.667 0.00 0.00 0.00 3.18
149 150 3.378427 GCTCATTTTCGCCTACCTGATTT 59.622 43.478 0.00 0.00 0.00 2.17
153 154 4.759516 TTTTCGCCTACCTGATTTGTTC 57.240 40.909 0.00 0.00 0.00 3.18
158 159 3.621715 CGCCTACCTGATTTGTTCTTACC 59.378 47.826 0.00 0.00 0.00 2.85
160 161 5.254115 GCCTACCTGATTTGTTCTTACCTT 58.746 41.667 0.00 0.00 0.00 3.50
161 162 5.123979 GCCTACCTGATTTGTTCTTACCTTG 59.876 44.000 0.00 0.00 0.00 3.61
164 165 7.549488 CCTACCTGATTTGTTCTTACCTTGTAG 59.451 40.741 0.00 0.00 0.00 2.74
165 166 6.838382 ACCTGATTTGTTCTTACCTTGTAGT 58.162 36.000 0.00 0.00 0.00 2.73
166 167 6.710744 ACCTGATTTGTTCTTACCTTGTAGTG 59.289 38.462 0.00 0.00 0.00 2.74
167 168 6.348540 CCTGATTTGTTCTTACCTTGTAGTGC 60.349 42.308 0.00 0.00 0.00 4.40
168 169 6.058833 TGATTTGTTCTTACCTTGTAGTGCA 58.941 36.000 0.00 0.00 0.00 4.57
179 190 9.155975 CTTACCTTGTAGTGCATATATTGATCC 57.844 37.037 0.00 0.00 0.00 3.36
193 205 9.102757 CATATATTGATCCTGGTGTATACTTGC 57.897 37.037 4.17 0.00 0.00 4.01
195 207 4.672587 TGATCCTGGTGTATACTTGCTC 57.327 45.455 4.17 0.00 0.00 4.26
301 314 7.040132 TGTTTATCTTAACATGCACACATTCCA 60.040 33.333 0.00 0.00 32.87 3.53
302 315 7.643569 TTATCTTAACATGCACACATTCCAT 57.356 32.000 0.00 0.00 32.87 3.41
366 379 6.591313 TCGATATATTTTTAGTTGCACGCA 57.409 33.333 0.00 0.00 0.00 5.24
414 427 5.528690 TCCAGTTGTTATATCAGCAAGATGC 59.471 40.000 2.28 0.00 45.46 3.91
494 507 0.676736 ATAGAGAGCTAAGGGTGCGC 59.323 55.000 0.00 0.00 35.28 6.09
646 659 3.901844 TCCTAAAGTTCCACAGTAGCAGT 59.098 43.478 0.00 0.00 0.00 4.40
670 683 6.543831 GTCATATAATGTGTCAAAAGGAGCCT 59.456 38.462 0.00 0.00 0.00 4.58
684 697 1.405526 GGAGCCTGCGTCACTTATTCA 60.406 52.381 0.00 0.00 0.00 2.57
685 698 1.661112 GAGCCTGCGTCACTTATTCAC 59.339 52.381 0.00 0.00 0.00 3.18
686 699 1.276421 AGCCTGCGTCACTTATTCACT 59.724 47.619 0.00 0.00 0.00 3.41
690 703 2.674852 CTGCGTCACTTATTCACTGCAT 59.325 45.455 0.00 0.00 0.00 3.96
693 706 4.875536 TGCGTCACTTATTCACTGCATATT 59.124 37.500 0.00 0.00 0.00 1.28
834 847 0.656259 CGAATCTCTCAGGCGTCGTA 59.344 55.000 0.00 0.00 0.00 3.43
836 849 2.287069 CGAATCTCTCAGGCGTCGTATT 60.287 50.000 0.00 0.00 0.00 1.89
878 891 7.412853 TTTGCCCCCAAAACTAATACTAATC 57.587 36.000 0.00 0.00 37.97 1.75
879 892 6.080969 TGCCCCCAAAACTAATACTAATCA 57.919 37.500 0.00 0.00 0.00 2.57
880 893 5.889289 TGCCCCCAAAACTAATACTAATCAC 59.111 40.000 0.00 0.00 0.00 3.06
881 894 5.301045 GCCCCCAAAACTAATACTAATCACC 59.699 44.000 0.00 0.00 0.00 4.02
882 895 6.428295 CCCCCAAAACTAATACTAATCACCA 58.572 40.000 0.00 0.00 0.00 4.17
883 896 6.893005 CCCCCAAAACTAATACTAATCACCAA 59.107 38.462 0.00 0.00 0.00 3.67
958 971 3.282885 GAGCCCCATTTTAGACTCCAAG 58.717 50.000 0.00 0.00 0.00 3.61
983 997 8.652290 AGATCCAAACTAATTAAGTAGCTAGGG 58.348 37.037 9.78 6.95 37.50 3.53
1040 1054 0.600255 AAACTCAAGCCTGTCGTCGG 60.600 55.000 0.00 0.00 0.00 4.79
1120 1139 5.240891 CCTTCATAGCTGGTACATATGTGG 58.759 45.833 18.81 7.03 38.20 4.17
1137 1170 2.042297 TGTGGAGACCTCTCTCTCACAT 59.958 50.000 13.53 0.00 43.04 3.21
1138 1171 2.426738 GTGGAGACCTCTCTCTCACATG 59.573 54.545 2.37 0.00 42.55 3.21
1147 1180 2.301009 TCTCTCTCACATGCACACACAT 59.699 45.455 0.00 0.00 0.00 3.21
1148 1181 2.671888 CTCTCTCACATGCACACACATC 59.328 50.000 0.00 0.00 0.00 3.06
1149 1182 2.301009 TCTCTCACATGCACACACATCT 59.699 45.455 0.00 0.00 0.00 2.90
1150 1183 3.072211 CTCTCACATGCACACACATCTT 58.928 45.455 0.00 0.00 0.00 2.40
1151 1184 3.479489 TCTCACATGCACACACATCTTT 58.521 40.909 0.00 0.00 0.00 2.52
1162 1212 6.127842 TGCACACACATCTTTCTAGACGTATA 60.128 38.462 0.00 0.00 31.99 1.47
1164 1214 7.096436 GCACACACATCTTTCTAGACGTATATG 60.096 40.741 0.00 0.00 31.99 1.78
1166 1216 9.117183 ACACACATCTTTCTAGACGTATATGTA 57.883 33.333 0.00 0.00 31.99 2.29
1359 2418 2.482333 CCTCGCCGACTCCTACCTG 61.482 68.421 0.00 0.00 0.00 4.00
1493 2579 3.423645 GCGTTGTCTTTTTCCTGATCGAG 60.424 47.826 0.00 0.00 0.00 4.04
1503 2766 0.721718 CCTGATCGAGGTTGCGTTTC 59.278 55.000 0.00 0.00 37.02 2.78
1510 2855 0.511653 GAGGTTGCGTTTCCGAGTTC 59.488 55.000 0.00 0.00 35.63 3.01
1572 2950 8.876790 GTGACGCTAACTACCAAATTTATTACT 58.123 33.333 0.00 0.00 0.00 2.24
1583 2961 8.658840 ACCAAATTTATTACTCCCTTTTAGCA 57.341 30.769 0.00 0.00 0.00 3.49
1584 2962 9.095700 ACCAAATTTATTACTCCCTTTTAGCAA 57.904 29.630 0.00 0.00 0.00 3.91
1585 2963 9.586435 CCAAATTTATTACTCCCTTTTAGCAAG 57.414 33.333 0.00 0.00 0.00 4.01
1618 2996 1.252904 TTACTCCCTCCGACCCAACG 61.253 60.000 0.00 0.00 0.00 4.10
1634 3012 3.938963 CCCAACGATTAATATGGATCGGG 59.061 47.826 19.21 13.50 46.90 5.14
1643 3021 2.304221 TATGGATCGGGTGGAGTAGG 57.696 55.000 0.00 0.00 0.00 3.18
1652 3030 3.449737 TCGGGTGGAGTAGGTAAAATGAG 59.550 47.826 0.00 0.00 0.00 2.90
1661 3039 8.437575 TGGAGTAGGTAAAATGAGTTTCTTCTT 58.562 33.333 0.00 0.00 0.00 2.52
1662 3040 8.937884 GGAGTAGGTAAAATGAGTTTCTTCTTC 58.062 37.037 0.00 0.00 0.00 2.87
1663 3041 9.713713 GAGTAGGTAAAATGAGTTTCTTCTTCT 57.286 33.333 0.00 0.00 0.00 2.85
1667 3045 9.634021 AGGTAAAATGAGTTTCTTCTTCTTCTT 57.366 29.630 0.00 0.00 0.00 2.52
1706 3479 5.023452 AGGGTGGAGATAAAATGGGTTTTC 58.977 41.667 0.00 0.00 38.44 2.29
2080 4598 6.342906 TGGTTTATGTAATCCGTTGTAGGAG 58.657 40.000 0.00 0.00 44.55 3.69
2104 4625 3.763897 CTCCTCCCATTTTTCGGTCAATT 59.236 43.478 0.00 0.00 0.00 2.32
2120 4641 7.359595 TCGGTCAATTAAAGAAACTCATTGTG 58.640 34.615 0.00 0.00 0.00 3.33
2287 4836 5.356190 TCTGGCTCATGCTCTCAAATAAAAG 59.644 40.000 0.00 0.00 39.59 2.27
2336 5139 0.873054 CTGGATGCATTCGCTGATCC 59.127 55.000 0.00 0.00 39.64 3.36
2356 5160 7.356680 TGATCCCTTTCATATCAAACTCCAAT 58.643 34.615 0.00 0.00 0.00 3.16
2558 5784 5.703130 GCTGGAGAAATAACTCACTCTTTGT 59.297 40.000 0.00 0.00 38.51 2.83
2667 5897 6.998968 AACAAAAAGGAAACATGATTGCAA 57.001 29.167 9.78 0.00 0.00 4.08
2670 5900 5.989551 AAAAGGAAACATGATTGCAACAC 57.010 34.783 0.00 0.00 0.00 3.32
2682 5912 8.313292 ACATGATTGCAACACAACCTTTATATT 58.687 29.630 0.00 0.00 42.27 1.28
2690 5920 8.288913 GCAACACAACCTTTATATTTTTGCAAT 58.711 29.630 0.00 0.00 36.49 3.56
2721 5951 8.690840 GCACTGTCTTATTACAACAAAATGAAC 58.309 33.333 0.00 0.00 0.00 3.18
2777 6112 5.009210 TGCAGCATTCTTTACCTTTTTACGT 59.991 36.000 0.00 0.00 0.00 3.57
2906 6303 2.279186 CCACACTGCACGTCGTCA 60.279 61.111 0.00 0.00 0.00 4.35
2966 6363 1.956170 CGTCCTGTATGCCGCCATC 60.956 63.158 0.00 0.00 32.85 3.51
3042 6439 4.988598 ACCAGTTCGGCAGCACGG 62.989 66.667 0.00 0.00 39.03 4.94
3098 6495 2.160721 TCCTCTACGGCTCCTTCATT 57.839 50.000 0.00 0.00 0.00 2.57
3107 6504 0.449388 GCTCCTTCATTGTTGGCGAG 59.551 55.000 0.00 0.00 0.00 5.03
3133 6530 2.430694 CCATTGTCTACATCCAGGACGA 59.569 50.000 0.00 0.00 33.21 4.20
3147 6544 3.621805 ACGACGTGTCATGGGCCA 61.622 61.111 9.61 9.61 0.00 5.36
3169 6566 0.602905 GGGTTTGGTGTCTGTCTCGG 60.603 60.000 0.00 0.00 0.00 4.63
3201 6598 2.979814 TAGCTTGGCGATGCTTCTTA 57.020 45.000 14.13 0.00 40.35 2.10
3228 6625 3.959462 GGTACTACCGGATGCCCA 58.041 61.111 9.46 0.00 0.00 5.36
3269 6666 4.719369 GACCTGGCTCGCGTCGTT 62.719 66.667 5.77 0.00 0.00 3.85
3308 6708 0.176680 CTAGCATCCAAGTCGGCACT 59.823 55.000 0.00 0.00 33.14 4.40
3339 6739 1.542915 TGCAGTACAACGTAGGAGACC 59.457 52.381 0.00 0.00 0.00 3.85
3447 6864 2.099592 ACCATGTCACTGTTGTTTGCTG 59.900 45.455 0.00 0.00 0.00 4.41
3455 6872 2.684881 ACTGTTGTTTGCTGAACCTCTG 59.315 45.455 1.92 2.63 37.45 3.35
3460 6877 3.565307 TGTTTGCTGAACCTCTGGATTT 58.435 40.909 0.00 0.00 37.45 2.17
3461 6878 3.318839 TGTTTGCTGAACCTCTGGATTTG 59.681 43.478 0.00 0.00 37.45 2.32
3465 6882 3.245016 TGCTGAACCTCTGGATTTGTGAT 60.245 43.478 0.00 0.00 0.00 3.06
3564 6994 1.517832 GTGCATCAGGTCCTAGCGT 59.482 57.895 0.00 0.00 0.00 5.07
3739 7169 1.303317 ACACTTCAACATCCCGGCC 60.303 57.895 0.00 0.00 0.00 6.13
3829 7259 1.277273 CCTCTCTGGCACAAGATCACA 59.723 52.381 0.00 0.00 38.70 3.58
3831 7261 2.233186 CTCTCTGGCACAAGATCACAGA 59.767 50.000 0.00 0.00 38.70 3.41
3838 7271 1.349026 CACAAGATCACAGACACCCCT 59.651 52.381 0.00 0.00 0.00 4.79
3985 7439 2.853542 TTGTGGCTCCTGCTCCCA 60.854 61.111 0.00 0.00 39.59 4.37
4024 7478 3.787001 GAGGCCCTCCACTTCCCG 61.787 72.222 0.00 0.00 33.74 5.14
4046 7500 2.504175 GGGAACATGGCCTTCTACTACA 59.496 50.000 3.32 0.00 0.00 2.74
4132 7586 3.749609 GGTTCTACATAAGCACGGTGTTT 59.250 43.478 14.58 14.58 0.00 2.83
4139 7593 5.726397 ACATAAGCACGGTGTTTGTAGATA 58.274 37.500 18.77 0.00 0.00 1.98
4141 7595 6.479001 ACATAAGCACGGTGTTTGTAGATATC 59.521 38.462 18.77 0.00 0.00 1.63
4189 7643 2.478292 GGGAACATAGACCAAGGGAGA 58.522 52.381 0.00 0.00 0.00 3.71
4278 7732 5.641709 CGTCTGGCGATACAAGTATCATAT 58.358 41.667 17.58 0.00 44.77 1.78
4285 7739 5.066117 GCGATACAAGTATCATATCCGAGGA 59.934 44.000 17.58 0.00 41.44 3.71
4309 7763 1.985159 AGGGTGGCAATGTAGACAAGA 59.015 47.619 0.00 0.00 0.00 3.02
4380 7840 9.525409 CAAAATTCTCAGTTTCACTTCTCATTT 57.475 29.630 0.00 0.00 0.00 2.32
4405 7865 9.961264 TTATACAGTACAAAATGGGTGTATTGA 57.039 29.630 12.29 0.29 40.00 2.57
4409 7869 8.107095 ACAGTACAAAATGGGTGTATTGAGTAT 58.893 33.333 12.29 0.00 40.00 2.12
4418 7878 5.427157 TGGGTGTATTGAGTATAGCAAGGAA 59.573 40.000 0.00 0.00 0.00 3.36
4438 7900 6.799512 AGGAAGCAAAATGATAATGTACTGC 58.200 36.000 0.00 0.00 0.00 4.40
4448 7910 7.902920 ATGATAATGTACTGCCTCCATTTTT 57.097 32.000 0.00 0.00 31.63 1.94
4449 7911 8.995027 ATGATAATGTACTGCCTCCATTTTTA 57.005 30.769 0.00 0.00 31.63 1.52
4455 7917 9.869757 AATGTACTGCCTCCATTTTTAAAATAC 57.130 29.630 0.55 0.00 0.00 1.89
4594 10253 8.311650 AGATAGTTATCATGCATTAACCGAAC 57.688 34.615 14.79 6.61 35.17 3.95
4628 10287 3.316308 CACTTGTTAATCATAGGCCTGCC 59.684 47.826 17.99 0.00 0.00 4.85
4669 10328 6.266786 ACACCTTACAAATTTAGGAACTTGGG 59.733 38.462 11.66 1.44 41.75 4.12
4670 10329 5.245301 ACCTTACAAATTTAGGAACTTGGGC 59.755 40.000 11.66 0.00 41.75 5.36
4744 10403 7.942341 TCATCTACCAAGAACCAACAAACTTAT 59.058 33.333 0.00 0.00 34.73 1.73
4747 10406 6.327279 ACCAAGAACCAACAAACTTATAGC 57.673 37.500 0.00 0.00 0.00 2.97
4885 10544 2.684881 CAATCTGGAATTTGAGGGGACG 59.315 50.000 0.00 0.00 0.00 4.79
4900 10559 1.408822 GGGACGAGCCTGGATTTGAAT 60.409 52.381 0.00 0.00 36.66 2.57
4903 10562 0.383231 CGAGCCTGGATTTGAATGCC 59.617 55.000 0.00 0.00 0.00 4.40
4906 10565 0.532115 GCCTGGATTTGAATGCCGTT 59.468 50.000 0.00 0.00 0.00 4.44
4907 10566 1.736696 GCCTGGATTTGAATGCCGTTG 60.737 52.381 0.00 0.00 0.00 4.10
4918 10577 3.806521 TGAATGCCGTTGAAAACCATTTG 59.193 39.130 0.00 0.00 46.28 2.32
4925 10584 4.497674 CCGTTGAAAACCATTTGGACGTTA 60.498 41.667 3.01 0.00 46.28 3.18
4989 10648 1.339727 ACTCCGCCCATAAGAACCAAC 60.340 52.381 0.00 0.00 0.00 3.77
4996 10662 3.068560 CCCATAAGAACCAACGTTTCGA 58.931 45.455 0.00 0.00 30.30 3.71
5002 10668 4.838959 CCAACGTTTCGATGGTGC 57.161 55.556 0.00 0.00 43.21 5.01
5034 10707 4.698583 AAGTCAGTCGTGGTACATAGAC 57.301 45.455 0.00 0.39 44.52 2.59
5044 10717 3.371965 TGGTACATAGACCAGTTCCTCC 58.628 50.000 0.00 0.00 44.79 4.30
5046 10719 2.642171 ACATAGACCAGTTCCTCCCA 57.358 50.000 0.00 0.00 0.00 4.37
5052 10726 2.663196 CAGTTCCTCCCACCGGTC 59.337 66.667 2.59 0.00 0.00 4.79
5084 10758 6.112058 GGATCATAGCAAGTTTCAGACTTCT 58.888 40.000 0.00 0.00 45.40 2.85
5117 10792 3.499338 TCTTGATTGGCTTGGAACACAT 58.501 40.909 0.00 0.00 39.29 3.21
5161 10836 3.936902 TTCGTAGCAACTTCACAACAC 57.063 42.857 0.00 0.00 0.00 3.32
5242 10917 0.467844 TGCTCCAAAGGCTGCTGAAA 60.468 50.000 0.00 0.00 0.00 2.69
5269 10944 0.886043 TGTGTCAGCATGGTGAGCAC 60.886 55.000 31.49 31.49 36.16 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.072131 GTGCAGAACCTTTTGTATCAGGA 58.928 43.478 0.00 0.00 33.90 3.86
20 21 3.820467 TGTGCAGAACCTTTTGTATCAGG 59.180 43.478 0.00 0.00 36.10 3.86
119 120 3.674997 AGGCGAAAATGAGCTTAGTTGA 58.325 40.909 0.00 0.00 0.00 3.18
142 143 6.348540 GCACTACAAGGTAAGAACAAATCAGG 60.349 42.308 0.00 0.00 0.00 3.86
149 150 9.325198 CAATATATGCACTACAAGGTAAGAACA 57.675 33.333 0.00 0.00 0.00 3.18
153 154 9.155975 GGATCAATATATGCACTACAAGGTAAG 57.844 37.037 0.00 0.00 0.00 2.34
158 159 7.118825 CACCAGGATCAATATATGCACTACAAG 59.881 40.741 0.00 0.00 0.00 3.16
160 161 6.043127 ACACCAGGATCAATATATGCACTACA 59.957 38.462 0.00 0.00 0.00 2.74
161 162 6.467677 ACACCAGGATCAATATATGCACTAC 58.532 40.000 0.00 0.00 0.00 2.73
164 165 8.260818 AGTATACACCAGGATCAATATATGCAC 58.739 37.037 5.50 0.00 0.00 4.57
165 166 8.379428 AGTATACACCAGGATCAATATATGCA 57.621 34.615 5.50 0.00 0.00 3.96
166 167 9.102757 CAAGTATACACCAGGATCAATATATGC 57.897 37.037 5.50 0.00 0.00 3.14
167 168 9.102757 GCAAGTATACACCAGGATCAATATATG 57.897 37.037 5.50 0.00 0.00 1.78
168 169 9.051259 AGCAAGTATACACCAGGATCAATATAT 57.949 33.333 5.50 0.00 0.00 0.86
179 190 2.555199 GCAGGAGCAAGTATACACCAG 58.445 52.381 5.50 0.00 41.58 4.00
193 205 1.203052 ACAATTCCGCATTTGCAGGAG 59.797 47.619 13.17 7.47 41.80 3.69
195 207 2.083167 AACAATTCCGCATTTGCAGG 57.917 45.000 3.13 5.37 42.21 4.85
284 297 4.395854 GTGAGATGGAATGTGTGCATGTTA 59.604 41.667 0.00 0.00 38.62 2.41
292 305 2.639347 TCTGTGGTGAGATGGAATGTGT 59.361 45.455 0.00 0.00 0.00 3.72
301 314 1.277557 GAGGTTGCTCTGTGGTGAGAT 59.722 52.381 0.00 0.00 36.23 2.75
302 315 0.681733 GAGGTTGCTCTGTGGTGAGA 59.318 55.000 0.00 0.00 36.23 3.27
363 376 4.918129 GCCGCTTGGATGCATGCG 62.918 66.667 31.54 31.54 44.71 4.73
366 379 0.534877 TATTCGCCGCTTGGATGCAT 60.535 50.000 0.00 0.00 33.02 3.96
372 385 1.268539 GGATTTGTATTCGCCGCTTGG 60.269 52.381 0.00 0.00 0.00 3.61
419 432 8.983724 GGTCGTTACTATACTTAGTAGTCGAAT 58.016 37.037 16.25 0.00 42.85 3.34
420 433 7.979537 TGGTCGTTACTATACTTAGTAGTCGAA 59.020 37.037 16.25 6.90 42.85 3.71
421 434 7.435488 GTGGTCGTTACTATACTTAGTAGTCGA 59.565 40.741 0.00 13.26 40.96 4.20
444 457 1.071299 GCCAAAGCCAAAAGGGTGG 59.929 57.895 0.00 0.00 42.05 4.61
494 507 0.036765 TAGCTGCACGTACAAAGGGG 60.037 55.000 1.02 0.00 0.00 4.79
646 659 6.543465 CAGGCTCCTTTTGACACATTATATGA 59.457 38.462 0.00 0.00 0.00 2.15
670 683 2.162319 TGCAGTGAATAAGTGACGCA 57.838 45.000 0.00 0.00 0.00 5.24
684 697 6.423604 CCTTTCGGAAAACAAAAATATGCAGT 59.576 34.615 4.53 0.00 0.00 4.40
685 698 6.644592 TCCTTTCGGAAAACAAAAATATGCAG 59.355 34.615 4.53 0.00 36.03 4.41
686 699 6.516718 TCCTTTCGGAAAACAAAAATATGCA 58.483 32.000 4.53 0.00 36.03 3.96
740 753 2.159653 GCCAAAGCGTCAGATGTAACAG 60.160 50.000 0.00 0.00 0.00 3.16
742 755 1.130561 GGCCAAAGCGTCAGATGTAAC 59.869 52.381 0.00 0.00 41.24 2.50
744 757 0.739462 CGGCCAAAGCGTCAGATGTA 60.739 55.000 2.24 0.00 41.24 2.29
862 875 9.226606 TGGAGTTGGTGATTAGTATTAGTTTTG 57.773 33.333 0.00 0.00 0.00 2.44
863 876 9.802039 TTGGAGTTGGTGATTAGTATTAGTTTT 57.198 29.630 0.00 0.00 0.00 2.43
866 879 8.147244 ACTTGGAGTTGGTGATTAGTATTAGT 57.853 34.615 0.00 0.00 0.00 2.24
879 892 9.839185 ACTGGTATATATATACTTGGAGTTGGT 57.161 33.333 25.16 12.12 38.79 3.67
958 971 8.430431 ACCCTAGCTACTTAATTAGTTTGGATC 58.570 37.037 14.93 0.00 38.33 3.36
983 997 1.654317 CATCTCCAGCTGCTCTTGAC 58.346 55.000 8.66 0.00 0.00 3.18
1040 1054 1.172175 CTCTTGGGCTTCTTCTTGGC 58.828 55.000 0.00 0.00 0.00 4.52
1137 1170 3.317150 CGTCTAGAAAGATGTGTGTGCA 58.683 45.455 0.00 0.00 34.54 4.57
1138 1171 3.980238 CGTCTAGAAAGATGTGTGTGC 57.020 47.619 0.00 0.00 34.54 4.57
1162 1212 5.673514 TGCTCACACACACATATCATACAT 58.326 37.500 0.00 0.00 0.00 2.29
1164 1214 4.509230 CCTGCTCACACACACATATCATAC 59.491 45.833 0.00 0.00 0.00 2.39
1166 1216 3.538591 CCTGCTCACACACACATATCAT 58.461 45.455 0.00 0.00 0.00 2.45
1168 1218 2.093500 TCCCTGCTCACACACACATATC 60.093 50.000 0.00 0.00 0.00 1.63
1169 1219 1.908619 TCCCTGCTCACACACACATAT 59.091 47.619 0.00 0.00 0.00 1.78
1170 1220 1.276138 CTCCCTGCTCACACACACATA 59.724 52.381 0.00 0.00 0.00 2.29
1172 1222 1.447217 CTCCCTGCTCACACACACA 59.553 57.895 0.00 0.00 0.00 3.72
1173 1223 1.963338 GCTCCCTGCTCACACACAC 60.963 63.158 0.00 0.00 38.95 3.82
1359 2418 3.090532 ATGACCGGGAAGGAGCCC 61.091 66.667 6.32 0.00 45.00 5.19
1503 2766 2.918712 ATAGCTTCCATGGAACTCGG 57.081 50.000 23.63 14.50 0.00 4.63
1510 2855 3.244700 CCCCACTTCTATAGCTTCCATGG 60.245 52.174 4.97 4.97 0.00 3.66
1603 2981 0.324552 TAATCGTTGGGTCGGAGGGA 60.325 55.000 0.00 0.00 0.00 4.20
1609 2987 5.779806 GATCCATATTAATCGTTGGGTCG 57.220 43.478 8.64 0.00 30.22 4.79
1618 2996 5.422214 ACTCCACCCGATCCATATTAATC 57.578 43.478 0.00 0.00 0.00 1.75
1634 3012 7.878644 AGAAGAAACTCATTTTACCTACTCCAC 59.121 37.037 0.00 0.00 0.00 4.02
1652 3030 9.325198 AGAAGAAGAAGAAGAAGAAGAAGAAAC 57.675 33.333 0.00 0.00 0.00 2.78
1661 3039 8.495260 ACCCTAAAAAGAAGAAGAAGAAGAAGA 58.505 33.333 0.00 0.00 0.00 2.87
1662 3040 8.563732 CACCCTAAAAAGAAGAAGAAGAAGAAG 58.436 37.037 0.00 0.00 0.00 2.85
1663 3041 7.502561 CCACCCTAAAAAGAAGAAGAAGAAGAA 59.497 37.037 0.00 0.00 0.00 2.52
1664 3042 6.998673 CCACCCTAAAAAGAAGAAGAAGAAGA 59.001 38.462 0.00 0.00 0.00 2.87
1665 3043 6.998673 TCCACCCTAAAAAGAAGAAGAAGAAG 59.001 38.462 0.00 0.00 0.00 2.85
1666 3044 6.906848 TCCACCCTAAAAAGAAGAAGAAGAA 58.093 36.000 0.00 0.00 0.00 2.52
1667 3045 6.329197 TCTCCACCCTAAAAAGAAGAAGAAGA 59.671 38.462 0.00 0.00 0.00 2.87
1683 3061 4.692523 AAACCCATTTTATCTCCACCCT 57.307 40.909 0.00 0.00 0.00 4.34
1750 3523 5.918011 TGATTTGAACGTGCCTACAATTTTC 59.082 36.000 0.00 0.00 0.00 2.29
2036 4420 6.947644 ACCAAATAACAGTTAAGACGGTTT 57.052 33.333 0.00 0.00 40.54 3.27
2052 4436 9.111613 CCTACAACGGATTACATAAACCAAATA 57.888 33.333 0.00 0.00 0.00 1.40
2080 4598 2.290071 TGACCGAAAAATGGGAGGAGAC 60.290 50.000 0.00 0.00 0.00 3.36
2088 4606 8.587952 AGTTTCTTTAATTGACCGAAAAATGG 57.412 30.769 0.00 0.00 0.00 3.16
2104 4625 5.238432 ACACATCGCACAATGAGTTTCTTTA 59.762 36.000 0.00 0.00 27.73 1.85
2120 4641 6.966632 ACATGAATAATTGTGTTACACATCGC 59.033 34.615 19.32 6.67 44.16 4.58
2242 4789 4.982916 AGAGGTCGTATTTGTCATTATCGC 59.017 41.667 0.00 0.00 0.00 4.58
2287 4836 7.524294 TGCATGAAACAGAGTTTTCTTTTTC 57.476 32.000 0.00 8.49 44.64 2.29
2336 5139 7.395190 TCACATTGGAGTTTGATATGAAAGG 57.605 36.000 0.00 0.00 0.00 3.11
2491 5716 6.870965 TCTGTTGTTGCACTGTACAAAAATTT 59.129 30.769 3.34 0.00 36.15 1.82
2510 5736 6.586751 CAGCTAACAATTTGCAAATCTGTTG 58.413 36.000 33.72 27.26 34.56 3.33
2558 5784 6.106648 TGGCACCATGAAAAATAATTGTCA 57.893 33.333 0.00 0.00 37.20 3.58
2566 5792 7.999450 ACAAAATATTGGCACCATGAAAAAT 57.001 28.000 0.00 0.00 41.01 1.82
2667 5897 9.430623 GGTATTGCAAAAATATAAAGGTTGTGT 57.569 29.630 1.71 0.00 0.00 3.72
2670 5900 8.603181 GCTGGTATTGCAAAAATATAAAGGTTG 58.397 33.333 1.71 0.00 0.00 3.77
2682 5912 3.221771 AGACAGTGCTGGTATTGCAAAA 58.778 40.909 1.71 0.00 42.41 2.44
2690 5920 6.104146 TGTTGTAATAAGACAGTGCTGGTA 57.896 37.500 4.11 0.00 34.19 3.25
2721 5951 7.582435 AAGTGACTATGGATTAATTATCGCG 57.418 36.000 0.00 0.00 33.82 5.87
2820 6210 9.289782 GAAAGCCTGGATAATGACATAGTTAAT 57.710 33.333 0.00 0.00 0.00 1.40
2823 6213 5.760253 CGAAAGCCTGGATAATGACATAGTT 59.240 40.000 0.00 0.00 0.00 2.24
2906 6303 1.602237 CTGGCACCCAACGGTAGAT 59.398 57.895 0.00 0.00 42.04 1.98
2951 6348 0.886490 GGAAGATGGCGGCATACAGG 60.886 60.000 25.86 0.00 0.00 4.00
2966 6363 2.101700 GCCAATGGCGAGAAGGAAG 58.898 57.895 9.14 0.00 39.62 3.46
3042 6439 2.435059 GAAGGTGTCCTGCTCGCC 60.435 66.667 0.00 0.00 32.13 5.54
3107 6504 1.134521 TGGATGTAGACAATGGCCGTC 60.135 52.381 0.00 0.00 0.00 4.79
3133 6530 2.045045 CCATGGCCCATGACACGT 60.045 61.111 25.42 0.00 43.81 4.49
3147 6544 1.073923 GAGACAGACACCAAACCCCAT 59.926 52.381 0.00 0.00 0.00 4.00
3169 6566 1.595489 CCAAGCTAAATGTCGATGCGC 60.595 52.381 0.00 0.00 0.00 6.09
3201 6598 2.497770 GTAGTACCGTGCGCCCAT 59.502 61.111 4.18 0.00 0.00 4.00
3228 6625 4.660938 GGGGCTGCCCTTTGTCGT 62.661 66.667 34.99 0.00 44.66 4.34
3308 6708 3.073678 GTTGTACTGCACATCACCATGA 58.926 45.455 0.00 0.00 36.90 3.07
3316 6716 2.823747 TCTCCTACGTTGTACTGCACAT 59.176 45.455 0.00 0.00 36.90 3.21
3382 6782 7.486647 CATTGTCACCTATACGTACCTTAAGT 58.513 38.462 0.00 0.00 0.00 2.24
3447 6864 7.814264 ATATGAATCACAAATCCAGAGGTTC 57.186 36.000 0.00 0.00 0.00 3.62
3484 6905 6.115446 TCGATTTAGAAATCTGCAGGAACAT 58.885 36.000 15.13 0.00 41.99 2.71
3739 7169 1.112315 AGCAGACAGAGATAGCCCCG 61.112 60.000 0.00 0.00 0.00 5.73
3802 7232 0.178921 TGTGCCAGAGAGGGAAGACT 60.179 55.000 0.00 0.00 40.60 3.24
3953 7386 2.668212 CAACACGGACATGGGCGT 60.668 61.111 0.00 0.00 0.00 5.68
4024 7478 0.919710 AGTAGAAGGCCATGTTCCCC 59.080 55.000 5.01 0.00 0.00 4.81
4046 7500 1.201429 AGCGTCTTGGGGAACTCCAT 61.201 55.000 0.00 0.00 36.58 3.41
4189 7643 4.859304 TGTCCAATACACGTTGTCTAGT 57.141 40.909 0.00 0.00 31.43 2.57
4278 7732 2.678934 CCACCCTCGTTCCTCGGA 60.679 66.667 0.00 0.00 40.32 4.55
4285 7739 0.981183 TCTACATTGCCACCCTCGTT 59.019 50.000 0.00 0.00 0.00 3.85
4380 7840 9.607988 CTCAATACACCCATTTTGTACTGTATA 57.392 33.333 0.00 0.00 32.30 1.47
4405 7865 8.752005 TTATCATTTTGCTTCCTTGCTATACT 57.248 30.769 0.00 0.00 0.00 2.12
4409 7869 7.408756 ACATTATCATTTTGCTTCCTTGCTA 57.591 32.000 0.00 0.00 0.00 3.49
4418 7878 5.300286 GGAGGCAGTACATTATCATTTTGCT 59.700 40.000 0.00 0.00 0.00 3.91
4472 7934 7.744087 TGCTGCTCAAAGATTAGTCTTAAAA 57.256 32.000 0.32 0.00 43.80 1.52
4480 7942 9.798994 ATAAAGAAATTGCTGCTCAAAGATTAG 57.201 29.630 0.00 0.00 38.34 1.73
4621 10280 1.452145 TTGTTTCGTTCAGGCAGGCC 61.452 55.000 0.97 0.97 0.00 5.19
4628 10287 7.411274 TGTAAGGTGTATTTTGTTTCGTTCAG 58.589 34.615 0.00 0.00 0.00 3.02
4660 10319 3.153919 TCATTTGTACTGCCCAAGTTCC 58.846 45.455 0.00 0.00 40.56 3.62
4669 10328 7.359595 TGACACTAAATGTTCATTTGTACTGC 58.640 34.615 17.58 6.51 43.56 4.40
4670 10329 9.333497 CATGACACTAAATGTTCATTTGTACTG 57.667 33.333 17.58 10.71 43.56 2.74
4855 10514 6.219417 TCAAATTCCAGATTGTGTTGTTGT 57.781 33.333 0.00 0.00 0.00 3.32
4865 10524 2.576191 TCGTCCCCTCAAATTCCAGATT 59.424 45.455 0.00 0.00 0.00 2.40
4885 10544 0.383231 CGGCATTCAAATCCAGGCTC 59.617 55.000 0.00 0.00 0.00 4.70
4900 10559 1.757118 TCCAAATGGTTTTCAACGGCA 59.243 42.857 0.00 0.00 36.34 5.69
4903 10562 3.073144 ACGTCCAAATGGTTTTCAACG 57.927 42.857 7.35 7.35 36.54 4.10
4906 10565 5.067936 ACATGTAACGTCCAAATGGTTTTCA 59.932 36.000 0.00 0.00 36.34 2.69
4907 10566 5.401079 CACATGTAACGTCCAAATGGTTTTC 59.599 40.000 0.00 0.00 36.34 2.29
4918 10577 1.508632 ACTGTGCACATGTAACGTCC 58.491 50.000 22.00 0.00 0.00 4.79
4989 10648 2.398554 CCCTGGCACCATCGAAACG 61.399 63.158 0.00 0.00 0.00 3.60
5014 10687 3.015327 GGTCTATGTACCACGACTGACT 58.985 50.000 0.00 0.00 39.50 3.41
5015 10688 2.751259 TGGTCTATGTACCACGACTGAC 59.249 50.000 0.00 0.00 44.68 3.51
5020 10693 2.756760 GGAACTGGTCTATGTACCACGA 59.243 50.000 0.00 0.00 44.68 4.35
5022 10695 3.132467 GGAGGAACTGGTCTATGTACCAC 59.868 52.174 0.00 0.00 44.68 4.16
5041 10714 0.747255 CATCTACTGACCGGTGGGAG 59.253 60.000 14.63 11.30 36.97 4.30
5044 10717 1.341531 GATCCATCTACTGACCGGTGG 59.658 57.143 14.63 7.31 0.00 4.61
5046 10719 2.454336 TGATCCATCTACTGACCGGT 57.546 50.000 6.92 6.92 0.00 5.28
5052 10726 6.988580 TGAAACTTGCTATGATCCATCTACTG 59.011 38.462 0.00 0.00 0.00 2.74
5084 10758 3.507233 GCCAATCAAGAATCTGTTGGTGA 59.493 43.478 17.68 4.62 41.01 4.02
5117 10792 7.976414 AATACTGAAATTCCCATGAAATCCA 57.024 32.000 0.00 0.00 33.32 3.41
5137 10812 5.844396 GTGTTGTGAAGTTGCTACGAAATAC 59.156 40.000 0.00 0.00 0.00 1.89
5161 10836 3.374058 GGTCATGTGGGAATTGTAGTTCG 59.626 47.826 0.00 0.00 0.00 3.95
5242 10917 1.749063 CCATGCTGACACATGCTTGAT 59.251 47.619 6.60 0.00 44.98 2.57
5269 10944 2.675242 TTGCTCCCCATACCACCGG 61.675 63.158 0.00 0.00 0.00 5.28
5270 10945 1.451387 GTTGCTCCCCATACCACCG 60.451 63.158 0.00 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.