Multiple sequence alignment - TraesCS7D01G043600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G043600 chr7D 100.000 2765 0 0 1 2765 22523938 22521174 0.000000e+00 5107.0
1 TraesCS7D01G043600 chr7D 89.017 1211 77 31 753 1934 22270440 22269257 0.000000e+00 1448.0
2 TraesCS7D01G043600 chr7D 88.170 989 81 19 763 1737 22509997 22509031 0.000000e+00 1146.0
3 TraesCS7D01G043600 chr7D 86.559 558 41 9 1692 2246 22509035 22508509 3.970000e-163 584.0
4 TraesCS7D01G043600 chr7D 85.870 92 13 0 2603 2694 22333704 22333613 6.300000e-17 99.0
5 TraesCS7D01G043600 chr4A 86.902 1504 127 36 598 2088 705170817 705169371 0.000000e+00 1622.0
6 TraesCS7D01G043600 chr4A 86.606 1202 96 39 764 1956 705055328 705054183 0.000000e+00 1267.0
7 TraesCS7D01G043600 chr4A 86.271 1180 88 31 764 1934 704808055 704806941 0.000000e+00 1214.0
8 TraesCS7D01G043600 chr4A 84.000 325 35 11 2379 2699 705053626 705053315 2.080000e-76 296.0
9 TraesCS7D01G043600 chr4A 89.394 132 14 0 1957 2088 705054046 705053915 1.700000e-37 167.0
10 TraesCS7D01G043600 chr7A 86.079 1135 97 24 606 1737 22916795 22915719 0.000000e+00 1164.0
11 TraesCS7D01G043600 chr7A 89.448 815 55 19 753 1551 22898554 22897755 0.000000e+00 1000.0
12 TraesCS7D01G043600 chr7A 87.106 698 54 11 1692 2379 22915723 22915052 0.000000e+00 758.0
13 TraesCS7D01G043600 chr7A 81.576 787 87 30 1615 2369 22897733 22896973 5.100000e-167 597.0
14 TraesCS7D01G043600 chr7A 82.955 176 16 10 2484 2658 22896705 22896543 2.220000e-31 147.0
15 TraesCS7D01G043600 chr5B 89.834 482 39 2 986 1466 469337853 469338325 6.550000e-171 610.0
16 TraesCS7D01G043600 chr6B 85.517 290 34 7 1648 1934 138522438 138522722 2.080000e-76 296.0
17 TraesCS7D01G043600 chr2A 80.303 264 36 11 958 1219 4322574 4322325 4.700000e-43 185.0
18 TraesCS7D01G043600 chr3D 90.789 76 7 0 1471 1546 506707372 506707447 4.870000e-18 102.0
19 TraesCS7D01G043600 chr1A 95.082 61 3 0 1473 1533 27383214 27383154 2.270000e-16 97.1
20 TraesCS7D01G043600 chr6D 89.655 58 5 1 104 161 159514640 159514584 3.820000e-09 73.1
21 TraesCS7D01G043600 chr1B 93.182 44 3 0 118 161 603100465 603100422 6.390000e-07 65.8
22 TraesCS7D01G043600 chr4B 93.023 43 2 1 121 162 579395020 579394978 8.270000e-06 62.1
23 TraesCS7D01G043600 chr2B 94.118 34 2 0 1303 1336 5603814 5603847 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G043600 chr7D 22521174 22523938 2764 True 5107.000000 5107 100.000000 1 2765 1 chr7D.!!$R3 2764
1 TraesCS7D01G043600 chr7D 22269257 22270440 1183 True 1448.000000 1448 89.017000 753 1934 1 chr7D.!!$R1 1181
2 TraesCS7D01G043600 chr7D 22508509 22509997 1488 True 865.000000 1146 87.364500 763 2246 2 chr7D.!!$R4 1483
3 TraesCS7D01G043600 chr4A 705169371 705170817 1446 True 1622.000000 1622 86.902000 598 2088 1 chr4A.!!$R2 1490
4 TraesCS7D01G043600 chr4A 704806941 704808055 1114 True 1214.000000 1214 86.271000 764 1934 1 chr4A.!!$R1 1170
5 TraesCS7D01G043600 chr4A 705053315 705055328 2013 True 576.666667 1267 86.666667 764 2699 3 chr4A.!!$R3 1935
6 TraesCS7D01G043600 chr7A 22915052 22916795 1743 True 961.000000 1164 86.592500 606 2379 2 chr7A.!!$R2 1773
7 TraesCS7D01G043600 chr7A 22896543 22898554 2011 True 581.333333 1000 84.659667 753 2658 3 chr7A.!!$R1 1905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 593 0.031857 CAGGCGCATAGAGAGGAGTG 59.968 60.0 10.83 0.0 0.0 3.51 F
953 970 0.108898 CACAGAGCGAGAGACAAGGG 60.109 60.0 0.00 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1698 1858 0.108567 GAGCCTTCCTCTTCGGTGAC 60.109 60.0 0.0 0.0 37.6 3.67 R
2699 3273 0.031314 CGACGAGGAGGTGATGATGG 59.969 60.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.987272 TTACATCTACATCATCTATTGGAACAG 57.013 33.333 0.00 0.00 42.39 3.16
32 33 6.933521 ACATCTACATCATCTATTGGAACAGC 59.066 38.462 0.00 0.00 42.39 4.40
33 34 5.532557 TCTACATCATCTATTGGAACAGCG 58.467 41.667 0.00 0.00 42.39 5.18
34 35 4.142609 ACATCATCTATTGGAACAGCGT 57.857 40.909 0.00 0.00 42.39 5.07
35 36 4.517285 ACATCATCTATTGGAACAGCGTT 58.483 39.130 0.00 0.00 42.39 4.84
36 37 4.943705 ACATCATCTATTGGAACAGCGTTT 59.056 37.500 0.00 0.00 42.39 3.60
37 38 5.415701 ACATCATCTATTGGAACAGCGTTTT 59.584 36.000 0.00 0.00 42.39 2.43
38 39 5.957842 TCATCTATTGGAACAGCGTTTTT 57.042 34.783 0.00 0.00 42.39 1.94
39 40 5.698832 TCATCTATTGGAACAGCGTTTTTG 58.301 37.500 0.00 0.00 42.39 2.44
40 41 5.240623 TCATCTATTGGAACAGCGTTTTTGT 59.759 36.000 0.00 0.00 42.39 2.83
41 42 5.103290 TCTATTGGAACAGCGTTTTTGTC 57.897 39.130 0.00 0.00 42.39 3.18
42 43 3.791973 ATTGGAACAGCGTTTTTGTCA 57.208 38.095 0.00 0.00 42.39 3.58
43 44 3.791973 TTGGAACAGCGTTTTTGTCAT 57.208 38.095 0.00 0.00 42.39 3.06
44 45 3.347958 TGGAACAGCGTTTTTGTCATC 57.652 42.857 0.00 0.00 0.00 2.92
45 46 2.286713 TGGAACAGCGTTTTTGTCATCG 60.287 45.455 0.00 0.00 0.00 3.84
46 47 2.286772 GGAACAGCGTTTTTGTCATCGT 60.287 45.455 0.00 0.00 0.00 3.73
47 48 2.383298 ACAGCGTTTTTGTCATCGTG 57.617 45.000 0.00 0.00 0.00 4.35
48 49 1.668751 ACAGCGTTTTTGTCATCGTGT 59.331 42.857 0.00 0.00 0.00 4.49
49 50 2.036217 CAGCGTTTTTGTCATCGTGTG 58.964 47.619 0.00 0.00 0.00 3.82
50 51 1.937223 AGCGTTTTTGTCATCGTGTGA 59.063 42.857 0.00 0.00 0.00 3.58
51 52 2.548057 AGCGTTTTTGTCATCGTGTGAT 59.452 40.909 0.00 0.00 39.48 3.06
63 64 5.356882 CATCGTGTGATGTAAAAAGTGGT 57.643 39.130 0.00 0.00 45.69 4.16
64 65 5.382303 CATCGTGTGATGTAAAAAGTGGTC 58.618 41.667 0.00 0.00 45.69 4.02
65 66 3.810941 TCGTGTGATGTAAAAAGTGGTCC 59.189 43.478 0.00 0.00 0.00 4.46
66 67 3.562141 CGTGTGATGTAAAAAGTGGTCCA 59.438 43.478 0.00 0.00 0.00 4.02
67 68 4.319477 CGTGTGATGTAAAAAGTGGTCCAG 60.319 45.833 0.00 0.00 0.00 3.86
68 69 4.023193 GTGTGATGTAAAAAGTGGTCCAGG 60.023 45.833 0.00 0.00 0.00 4.45
69 70 4.141367 TGTGATGTAAAAAGTGGTCCAGGA 60.141 41.667 0.00 0.00 0.00 3.86
70 71 4.215613 GTGATGTAAAAAGTGGTCCAGGAC 59.784 45.833 11.70 11.70 0.00 3.85
71 72 4.104102 TGATGTAAAAAGTGGTCCAGGACT 59.896 41.667 19.57 0.00 32.47 3.85
72 73 5.308497 TGATGTAAAAAGTGGTCCAGGACTA 59.692 40.000 19.57 10.97 32.47 2.59
73 74 5.836024 TGTAAAAAGTGGTCCAGGACTAT 57.164 39.130 19.57 2.83 32.47 2.12
74 75 6.195600 TGTAAAAAGTGGTCCAGGACTATT 57.804 37.500 19.57 7.40 32.47 1.73
75 76 6.607019 TGTAAAAAGTGGTCCAGGACTATTT 58.393 36.000 19.57 13.48 32.47 1.40
76 77 7.064229 TGTAAAAAGTGGTCCAGGACTATTTT 58.936 34.615 19.57 18.52 35.35 1.82
77 78 8.219178 TGTAAAAAGTGGTCCAGGACTATTTTA 58.781 33.333 21.98 18.50 33.52 1.52
78 79 7.520451 AAAAAGTGGTCCAGGACTATTTTAC 57.480 36.000 21.98 11.32 33.52 2.01
79 80 5.836024 AAGTGGTCCAGGACTATTTTACA 57.164 39.130 19.57 3.98 32.47 2.41
80 81 6.388619 AAGTGGTCCAGGACTATTTTACAT 57.611 37.500 19.57 0.64 32.47 2.29
81 82 5.990668 AGTGGTCCAGGACTATTTTACATC 58.009 41.667 19.57 0.00 32.47 3.06
82 83 5.487488 AGTGGTCCAGGACTATTTTACATCA 59.513 40.000 19.57 1.75 32.47 3.07
83 84 6.158695 AGTGGTCCAGGACTATTTTACATCAT 59.841 38.462 19.57 0.00 32.47 2.45
84 85 6.483640 GTGGTCCAGGACTATTTTACATCATC 59.516 42.308 19.57 0.00 32.47 2.92
85 86 6.386927 TGGTCCAGGACTATTTTACATCATCT 59.613 38.462 19.57 0.00 32.47 2.90
86 87 7.567250 TGGTCCAGGACTATTTTACATCATCTA 59.433 37.037 19.57 0.00 32.47 1.98
87 88 8.598041 GGTCCAGGACTATTTTACATCATCTAT 58.402 37.037 19.57 0.00 32.47 1.98
88 89 9.429359 GTCCAGGACTATTTTACATCATCTATG 57.571 37.037 12.94 0.00 41.74 2.23
89 90 8.097038 TCCAGGACTATTTTACATCATCTATGC 58.903 37.037 0.00 0.00 39.39 3.14
90 91 8.099537 CCAGGACTATTTTACATCATCTATGCT 58.900 37.037 0.00 0.00 39.39 3.79
91 92 9.149225 CAGGACTATTTTACATCATCTATGCTC 57.851 37.037 0.00 0.00 39.39 4.26
92 93 9.099071 AGGACTATTTTACATCATCTATGCTCT 57.901 33.333 0.00 0.00 39.39 4.09
93 94 9.717942 GGACTATTTTACATCATCTATGCTCTT 57.282 33.333 0.00 0.00 39.39 2.85
101 102 9.617523 TTACATCATCTATGCTCTTCAAAATGA 57.382 29.630 0.00 0.00 39.39 2.57
102 103 8.515695 ACATCATCTATGCTCTTCAAAATGAA 57.484 30.769 0.00 0.00 39.39 2.57
103 104 8.963725 ACATCATCTATGCTCTTCAAAATGAAA 58.036 29.630 0.00 0.00 39.39 2.69
104 105 9.797556 CATCATCTATGCTCTTCAAAATGAAAA 57.202 29.630 0.00 0.00 35.73 2.29
138 139 9.511272 AGGATAAAACTACGAAAATACAAAGGT 57.489 29.630 0.00 0.00 0.00 3.50
139 140 9.550811 GGATAAAACTACGAAAATACAAAGGTG 57.449 33.333 0.00 0.00 0.00 4.00
140 141 9.550811 GATAAAACTACGAAAATACAAAGGTGG 57.449 33.333 0.00 0.00 0.00 4.61
141 142 7.571080 AAAACTACGAAAATACAAAGGTGGA 57.429 32.000 0.00 0.00 0.00 4.02
142 143 6.549912 AACTACGAAAATACAAAGGTGGAC 57.450 37.500 0.00 0.00 0.00 4.02
143 144 5.613329 ACTACGAAAATACAAAGGTGGACA 58.387 37.500 0.00 0.00 0.00 4.02
144 145 6.235664 ACTACGAAAATACAAAGGTGGACAT 58.764 36.000 0.00 0.00 0.00 3.06
145 146 5.371115 ACGAAAATACAAAGGTGGACATG 57.629 39.130 0.00 0.00 0.00 3.21
146 147 4.217550 ACGAAAATACAAAGGTGGACATGG 59.782 41.667 0.00 0.00 0.00 3.66
147 148 4.217550 CGAAAATACAAAGGTGGACATGGT 59.782 41.667 0.00 0.00 0.00 3.55
148 149 5.278758 CGAAAATACAAAGGTGGACATGGTT 60.279 40.000 0.00 0.00 0.00 3.67
149 150 5.722021 AAATACAAAGGTGGACATGGTTC 57.278 39.130 0.00 0.00 0.00 3.62
150 151 1.995376 ACAAAGGTGGACATGGTTCC 58.005 50.000 0.00 0.00 36.03 3.62
151 152 1.216678 ACAAAGGTGGACATGGTTCCA 59.783 47.619 0.95 0.95 43.83 3.53
155 156 4.789977 TGGACATGGTTCCACGTG 57.210 55.556 9.08 9.08 41.00 4.49
156 157 1.599518 TGGACATGGTTCCACGTGC 60.600 57.895 10.91 2.81 41.00 5.34
157 158 1.599518 GGACATGGTTCCACGTGCA 60.600 57.895 10.91 2.60 35.49 4.57
158 159 1.574428 GACATGGTTCCACGTGCAC 59.426 57.895 10.91 6.82 0.00 4.57
159 160 1.852067 GACATGGTTCCACGTGCACC 61.852 60.000 22.29 22.29 0.00 5.01
160 161 2.282180 ATGGTTCCACGTGCACCC 60.282 61.111 24.73 17.02 0.00 4.61
161 162 3.126703 ATGGTTCCACGTGCACCCA 62.127 57.895 24.73 21.04 0.00 4.51
162 163 2.282180 GGTTCCACGTGCACCCAT 60.282 61.111 19.67 0.00 0.00 4.00
163 164 2.332654 GGTTCCACGTGCACCCATC 61.333 63.158 19.67 0.00 0.00 3.51
164 165 1.599518 GTTCCACGTGCACCCATCA 60.600 57.895 10.91 0.00 0.00 3.07
165 166 1.599518 TTCCACGTGCACCCATCAC 60.600 57.895 10.91 0.00 0.00 3.06
166 167 3.055719 CCACGTGCACCCATCACC 61.056 66.667 10.91 0.00 0.00 4.02
167 168 3.055719 CACGTGCACCCATCACCC 61.056 66.667 12.15 0.00 0.00 4.61
168 169 3.565214 ACGTGCACCCATCACCCA 61.565 61.111 12.15 0.00 0.00 4.51
169 170 2.045045 CGTGCACCCATCACCCAT 60.045 61.111 12.15 0.00 0.00 4.00
170 171 1.678635 CGTGCACCCATCACCCATT 60.679 57.895 12.15 0.00 0.00 3.16
171 172 1.656818 CGTGCACCCATCACCCATTC 61.657 60.000 12.15 0.00 0.00 2.67
172 173 1.000233 TGCACCCATCACCCATTCC 60.000 57.895 0.00 0.00 0.00 3.01
173 174 1.000233 GCACCCATCACCCATTCCA 60.000 57.895 0.00 0.00 0.00 3.53
174 175 0.614415 GCACCCATCACCCATTCCAA 60.614 55.000 0.00 0.00 0.00 3.53
175 176 1.935799 CACCCATCACCCATTCCAAA 58.064 50.000 0.00 0.00 0.00 3.28
176 177 2.255406 CACCCATCACCCATTCCAAAA 58.745 47.619 0.00 0.00 0.00 2.44
177 178 2.839425 CACCCATCACCCATTCCAAAAT 59.161 45.455 0.00 0.00 0.00 1.82
178 179 4.029520 CACCCATCACCCATTCCAAAATA 58.970 43.478 0.00 0.00 0.00 1.40
179 180 4.030216 ACCCATCACCCATTCCAAAATAC 58.970 43.478 0.00 0.00 0.00 1.89
180 181 4.264804 ACCCATCACCCATTCCAAAATACT 60.265 41.667 0.00 0.00 0.00 2.12
181 182 5.043732 ACCCATCACCCATTCCAAAATACTA 60.044 40.000 0.00 0.00 0.00 1.82
182 183 5.536161 CCCATCACCCATTCCAAAATACTAG 59.464 44.000 0.00 0.00 0.00 2.57
183 184 6.364701 CCATCACCCATTCCAAAATACTAGA 58.635 40.000 0.00 0.00 0.00 2.43
184 185 7.006509 CCATCACCCATTCCAAAATACTAGAT 58.993 38.462 0.00 0.00 0.00 1.98
185 186 7.506938 CCATCACCCATTCCAAAATACTAGATT 59.493 37.037 0.00 0.00 0.00 2.40
186 187 8.917088 CATCACCCATTCCAAAATACTAGATTT 58.083 33.333 0.00 0.00 0.00 2.17
187 188 8.893563 TCACCCATTCCAAAATACTAGATTTT 57.106 30.769 0.00 2.11 0.00 1.82
188 189 9.320295 TCACCCATTCCAAAATACTAGATTTTT 57.680 29.630 0.00 0.00 0.00 1.94
258 259 9.483916 TTCAAACTTTGTCGAATATTCTACTCA 57.516 29.630 17.96 7.75 0.00 3.41
259 260 8.922676 TCAAACTTTGTCGAATATTCTACTCAC 58.077 33.333 17.96 6.56 0.00 3.51
260 261 8.708742 CAAACTTTGTCGAATATTCTACTCACA 58.291 33.333 17.96 8.57 0.00 3.58
261 262 9.436957 AAACTTTGTCGAATATTCTACTCACAT 57.563 29.630 17.96 3.25 0.00 3.21
262 263 8.412608 ACTTTGTCGAATATTCTACTCACATG 57.587 34.615 17.96 0.00 0.00 3.21
263 264 8.035394 ACTTTGTCGAATATTCTACTCACATGT 58.965 33.333 17.96 0.00 0.00 3.21
264 265 7.755582 TTGTCGAATATTCTACTCACATGTG 57.244 36.000 20.18 20.18 0.00 3.21
265 266 7.095695 TGTCGAATATTCTACTCACATGTGA 57.904 36.000 26.33 26.33 38.06 3.58
266 267 7.543756 TGTCGAATATTCTACTCACATGTGAA 58.456 34.615 27.63 14.24 39.39 3.18
267 268 8.032451 TGTCGAATATTCTACTCACATGTGAAA 58.968 33.333 27.63 19.40 39.39 2.69
268 269 9.035607 GTCGAATATTCTACTCACATGTGAAAT 57.964 33.333 27.63 23.95 39.39 2.17
269 270 9.599866 TCGAATATTCTACTCACATGTGAAATT 57.400 29.630 27.63 17.36 39.39 1.82
303 304 9.912634 AAAAAGACACATGTGGTATTCTTATTG 57.087 29.630 28.64 0.10 32.52 1.90
304 305 8.862325 AAAGACACATGTGGTATTCTTATTGA 57.138 30.769 28.64 0.00 32.52 2.57
305 306 8.862325 AAGACACATGTGGTATTCTTATTGAA 57.138 30.769 28.64 0.00 32.14 2.69
306 307 8.498054 AGACACATGTGGTATTCTTATTGAAG 57.502 34.615 28.64 0.00 34.81 3.02
307 308 8.321353 AGACACATGTGGTATTCTTATTGAAGA 58.679 33.333 28.64 0.00 35.93 2.87
308 309 8.862325 ACACATGTGGTATTCTTATTGAAGAA 57.138 30.769 28.64 2.80 43.84 2.52
309 310 9.295825 ACACATGTGGTATTCTTATTGAAGAAA 57.704 29.630 28.64 0.00 43.41 2.52
326 327 9.748708 ATTGAAGAAAACAAAATCGAATCTCAA 57.251 25.926 0.00 0.00 0.00 3.02
327 328 9.579768 TTGAAGAAAACAAAATCGAATCTCAAA 57.420 25.926 0.00 0.00 0.00 2.69
328 329 9.579768 TGAAGAAAACAAAATCGAATCTCAAAA 57.420 25.926 0.00 0.00 0.00 2.44
331 332 9.748708 AGAAAACAAAATCGAATCTCAAAATCA 57.251 25.926 0.00 0.00 0.00 2.57
332 333 9.783425 GAAAACAAAATCGAATCTCAAAATCAC 57.217 29.630 0.00 0.00 0.00 3.06
333 334 7.552848 AACAAAATCGAATCTCAAAATCACG 57.447 32.000 0.00 0.00 0.00 4.35
334 335 6.086222 ACAAAATCGAATCTCAAAATCACGG 58.914 36.000 0.00 0.00 0.00 4.94
335 336 6.072728 ACAAAATCGAATCTCAAAATCACGGA 60.073 34.615 0.00 0.00 0.00 4.69
336 337 6.683974 AAATCGAATCTCAAAATCACGGAT 57.316 33.333 0.00 0.00 0.00 4.18
337 338 5.663795 ATCGAATCTCAAAATCACGGATG 57.336 39.130 0.00 0.00 0.00 3.51
338 339 4.503910 TCGAATCTCAAAATCACGGATGT 58.496 39.130 0.00 0.00 0.00 3.06
339 340 4.566759 TCGAATCTCAAAATCACGGATGTC 59.433 41.667 0.00 0.00 0.00 3.06
340 341 4.329801 CGAATCTCAAAATCACGGATGTCA 59.670 41.667 0.00 0.00 0.00 3.58
341 342 5.007039 CGAATCTCAAAATCACGGATGTCAT 59.993 40.000 0.00 0.00 0.00 3.06
342 343 6.457392 CGAATCTCAAAATCACGGATGTCATT 60.457 38.462 0.00 0.00 0.00 2.57
343 344 6.764308 ATCTCAAAATCACGGATGTCATTT 57.236 33.333 0.00 0.00 0.00 2.32
344 345 6.182039 TCTCAAAATCACGGATGTCATTTC 57.818 37.500 0.00 0.00 0.00 2.17
345 346 5.939883 TCTCAAAATCACGGATGTCATTTCT 59.060 36.000 0.00 0.00 0.00 2.52
346 347 6.430925 TCTCAAAATCACGGATGTCATTTCTT 59.569 34.615 0.00 0.00 0.00 2.52
347 348 6.611381 TCAAAATCACGGATGTCATTTCTTC 58.389 36.000 0.00 0.00 0.00 2.87
348 349 4.864916 AATCACGGATGTCATTTCTTCG 57.135 40.909 0.00 0.00 0.00 3.79
349 350 3.313012 TCACGGATGTCATTTCTTCGT 57.687 42.857 0.00 0.00 0.00 3.85
350 351 2.993220 TCACGGATGTCATTTCTTCGTG 59.007 45.455 0.00 0.00 0.00 4.35
351 352 2.993220 CACGGATGTCATTTCTTCGTGA 59.007 45.455 15.10 0.00 0.00 4.35
352 353 3.431912 CACGGATGTCATTTCTTCGTGAA 59.568 43.478 15.10 0.00 0.00 3.18
354 355 4.084013 ACGGATGTCATTTCTTCGTGAAAC 60.084 41.667 8.09 0.07 46.08 2.78
355 356 4.152402 CGGATGTCATTTCTTCGTGAAACT 59.848 41.667 8.09 0.00 46.08 2.66
356 357 5.622378 GGATGTCATTTCTTCGTGAAACTC 58.378 41.667 8.09 4.26 46.08 3.01
357 358 4.708868 TGTCATTTCTTCGTGAAACTCG 57.291 40.909 8.09 0.00 46.08 4.18
358 359 4.364860 TGTCATTTCTTCGTGAAACTCGA 58.635 39.130 8.09 0.00 46.08 4.04
359 360 4.208460 TGTCATTTCTTCGTGAAACTCGAC 59.792 41.667 16.14 16.14 46.08 4.20
360 361 4.208460 GTCATTTCTTCGTGAAACTCGACA 59.792 41.667 17.05 0.00 46.08 4.35
361 362 4.208460 TCATTTCTTCGTGAAACTCGACAC 59.792 41.667 8.09 0.00 46.08 3.67
366 367 3.415947 GTGAAACTCGACACGCAAC 57.584 52.632 0.00 0.00 0.00 4.17
367 368 0.648441 GTGAAACTCGACACGCAACA 59.352 50.000 0.00 0.00 0.00 3.33
368 369 1.260561 GTGAAACTCGACACGCAACAT 59.739 47.619 0.00 0.00 0.00 2.71
369 370 1.937223 TGAAACTCGACACGCAACATT 59.063 42.857 0.00 0.00 0.00 2.71
370 371 2.033236 TGAAACTCGACACGCAACATTC 60.033 45.455 0.00 0.00 0.00 2.67
371 372 1.865865 AACTCGACACGCAACATTCT 58.134 45.000 0.00 0.00 0.00 2.40
372 373 1.865865 ACTCGACACGCAACATTCTT 58.134 45.000 0.00 0.00 0.00 2.52
373 374 2.210116 ACTCGACACGCAACATTCTTT 58.790 42.857 0.00 0.00 0.00 2.52
374 375 2.612212 ACTCGACACGCAACATTCTTTT 59.388 40.909 0.00 0.00 0.00 2.27
375 376 2.966708 CTCGACACGCAACATTCTTTTG 59.033 45.455 0.00 0.00 0.00 2.44
376 377 2.609916 TCGACACGCAACATTCTTTTGA 59.390 40.909 0.00 0.00 0.00 2.69
377 378 3.249799 TCGACACGCAACATTCTTTTGAT 59.750 39.130 0.00 0.00 0.00 2.57
378 379 3.974401 CGACACGCAACATTCTTTTGATT 59.026 39.130 0.00 0.00 0.00 2.57
379 380 4.440758 CGACACGCAACATTCTTTTGATTT 59.559 37.500 0.00 0.00 0.00 2.17
380 381 5.051774 CGACACGCAACATTCTTTTGATTTT 60.052 36.000 0.00 0.00 0.00 1.82
381 382 6.141527 CGACACGCAACATTCTTTTGATTTTA 59.858 34.615 0.00 0.00 0.00 1.52
382 383 7.148983 CGACACGCAACATTCTTTTGATTTTAT 60.149 33.333 0.00 0.00 0.00 1.40
383 384 8.364129 ACACGCAACATTCTTTTGATTTTATT 57.636 26.923 0.00 0.00 0.00 1.40
384 385 9.469807 ACACGCAACATTCTTTTGATTTTATTA 57.530 25.926 0.00 0.00 0.00 0.98
403 404 9.765795 TTTTATTATTTATTTACAATGGGGGCG 57.234 29.630 0.00 0.00 0.00 6.13
404 405 6.987403 ATTATTTATTTACAATGGGGGCGT 57.013 33.333 0.00 0.00 0.00 5.68
405 406 4.664150 ATTTATTTACAATGGGGGCGTG 57.336 40.909 0.00 0.00 0.00 5.34
406 407 2.810870 TATTTACAATGGGGGCGTGT 57.189 45.000 0.00 0.00 0.00 4.49
407 408 1.181786 ATTTACAATGGGGGCGTGTG 58.818 50.000 0.00 0.00 0.00 3.82
408 409 0.896019 TTTACAATGGGGGCGTGTGG 60.896 55.000 0.00 0.00 0.00 4.17
409 410 1.780107 TTACAATGGGGGCGTGTGGA 61.780 55.000 0.00 0.00 0.00 4.02
410 411 1.780107 TACAATGGGGGCGTGTGGAA 61.780 55.000 0.00 0.00 0.00 3.53
411 412 2.282887 AATGGGGGCGTGTGGAAC 60.283 61.111 0.00 0.00 37.35 3.62
412 413 3.879180 AATGGGGGCGTGTGGAACC 62.879 63.158 0.00 0.00 34.36 3.62
416 417 4.265056 GGGCGTGTGGAACCAGGT 62.265 66.667 0.00 0.00 34.36 4.00
417 418 2.203294 GGCGTGTGGAACCAGGTT 60.203 61.111 3.79 3.79 34.36 3.50
418 419 1.826487 GGCGTGTGGAACCAGGTTT 60.826 57.895 6.21 0.00 34.36 3.27
419 420 1.652563 GCGTGTGGAACCAGGTTTC 59.347 57.895 6.21 4.65 34.36 2.78
420 421 1.098712 GCGTGTGGAACCAGGTTTCA 61.099 55.000 9.56 9.56 34.36 2.69
421 422 1.384525 CGTGTGGAACCAGGTTTCAA 58.615 50.000 15.62 3.31 32.38 2.69
422 423 1.746220 CGTGTGGAACCAGGTTTCAAA 59.254 47.619 15.62 7.21 32.38 2.69
423 424 2.164624 CGTGTGGAACCAGGTTTCAAAA 59.835 45.455 15.62 4.00 32.38 2.44
424 425 3.367498 CGTGTGGAACCAGGTTTCAAAAA 60.367 43.478 15.62 1.36 32.38 1.94
446 447 6.659745 AAACCATTGTCCCTAAAACTAACC 57.340 37.500 0.00 0.00 0.00 2.85
447 448 4.669700 ACCATTGTCCCTAAAACTAACCC 58.330 43.478 0.00 0.00 0.00 4.11
448 449 4.106663 ACCATTGTCCCTAAAACTAACCCA 59.893 41.667 0.00 0.00 0.00 4.51
449 450 5.081032 CCATTGTCCCTAAAACTAACCCAA 58.919 41.667 0.00 0.00 0.00 4.12
450 451 5.540719 CCATTGTCCCTAAAACTAACCCAAA 59.459 40.000 0.00 0.00 0.00 3.28
451 452 6.295067 CCATTGTCCCTAAAACTAACCCAAAG 60.295 42.308 0.00 0.00 0.00 2.77
452 453 4.732065 TGTCCCTAAAACTAACCCAAAGG 58.268 43.478 0.00 0.00 40.04 3.11
493 494 8.714179 TGTCTACCAAGTTTAAATGAATACACG 58.286 33.333 0.00 0.00 0.00 4.49
494 495 8.928733 GTCTACCAAGTTTAAATGAATACACGA 58.071 33.333 0.00 0.00 0.00 4.35
495 496 8.928733 TCTACCAAGTTTAAATGAATACACGAC 58.071 33.333 0.00 0.00 0.00 4.34
496 497 7.739498 ACCAAGTTTAAATGAATACACGACT 57.261 32.000 0.00 0.00 0.00 4.18
497 498 8.161699 ACCAAGTTTAAATGAATACACGACTT 57.838 30.769 0.00 0.00 0.00 3.01
498 499 8.073768 ACCAAGTTTAAATGAATACACGACTTG 58.926 33.333 0.00 0.00 40.44 3.16
499 500 8.073768 CCAAGTTTAAATGAATACACGACTTGT 58.926 33.333 10.37 0.00 39.62 3.16
513 514 5.134640 CACGACTTGTGTATAAACCAAACG 58.865 41.667 0.00 0.00 43.88 3.60
514 515 5.049167 ACGACTTGTGTATAAACCAAACGA 58.951 37.500 0.00 0.00 0.00 3.85
515 516 5.523188 ACGACTTGTGTATAAACCAAACGAA 59.477 36.000 0.00 0.00 0.00 3.85
516 517 6.068931 CGACTTGTGTATAAACCAAACGAAG 58.931 40.000 0.00 0.00 0.00 3.79
517 518 6.074195 CGACTTGTGTATAAACCAAACGAAGA 60.074 38.462 0.00 0.00 0.00 2.87
518 519 7.359765 CGACTTGTGTATAAACCAAACGAAGAT 60.360 37.037 0.00 0.00 0.00 2.40
519 520 8.836268 ACTTGTGTATAAACCAAACGAAGATA 57.164 30.769 0.00 0.00 0.00 1.98
520 521 9.444600 ACTTGTGTATAAACCAAACGAAGATAT 57.555 29.630 0.00 0.00 0.00 1.63
529 530 6.753107 ACCAAACGAAGATATTACTTTGGG 57.247 37.500 18.48 3.84 36.06 4.12
530 531 5.124936 ACCAAACGAAGATATTACTTTGGGC 59.875 40.000 18.48 0.00 36.06 5.36
531 532 5.449999 CCAAACGAAGATATTACTTTGGGCC 60.450 44.000 10.97 0.00 36.06 5.80
532 533 3.816994 ACGAAGATATTACTTTGGGCCC 58.183 45.455 17.59 17.59 36.06 5.80
533 534 3.201266 ACGAAGATATTACTTTGGGCCCA 59.799 43.478 24.45 24.45 36.06 5.36
534 535 3.564225 CGAAGATATTACTTTGGGCCCAC 59.436 47.826 28.70 9.95 0.00 4.61
535 536 4.686122 CGAAGATATTACTTTGGGCCCACT 60.686 45.833 28.70 12.55 0.00 4.00
536 537 4.170468 AGATATTACTTTGGGCCCACTG 57.830 45.455 28.70 22.63 0.00 3.66
537 538 2.137810 TATTACTTTGGGCCCACTGC 57.862 50.000 28.70 0.00 40.16 4.40
538 539 0.114168 ATTACTTTGGGCCCACTGCA 59.886 50.000 28.70 6.96 43.89 4.41
539 540 0.825840 TTACTTTGGGCCCACTGCAC 60.826 55.000 28.70 0.00 46.61 4.57
544 545 3.640407 GGGCCCACTGCACAGAGA 61.640 66.667 19.95 0.00 45.34 3.10
545 546 2.046507 GGCCCACTGCACAGAGAG 60.047 66.667 4.31 0.00 43.89 3.20
546 547 2.587247 GGCCCACTGCACAGAGAGA 61.587 63.158 4.31 0.00 43.89 3.10
547 548 1.079266 GCCCACTGCACAGAGAGAG 60.079 63.158 4.31 0.00 40.77 3.20
548 549 1.595882 CCCACTGCACAGAGAGAGG 59.404 63.158 4.31 0.00 0.00 3.69
549 550 1.190833 CCCACTGCACAGAGAGAGGT 61.191 60.000 4.31 0.00 0.00 3.85
550 551 0.037512 CCACTGCACAGAGAGAGGTG 60.038 60.000 4.31 0.00 38.05 4.00
551 552 0.964700 CACTGCACAGAGAGAGGTGA 59.035 55.000 4.31 0.00 37.18 4.02
552 553 1.067706 CACTGCACAGAGAGAGGTGAG 60.068 57.143 4.31 0.00 37.18 3.51
553 554 0.531657 CTGCACAGAGAGAGGTGAGG 59.468 60.000 0.00 0.00 37.18 3.86
554 555 0.113190 TGCACAGAGAGAGGTGAGGA 59.887 55.000 0.00 0.00 37.18 3.71
555 556 1.261480 GCACAGAGAGAGGTGAGGAA 58.739 55.000 0.00 0.00 37.18 3.36
556 557 1.204467 GCACAGAGAGAGGTGAGGAAG 59.796 57.143 0.00 0.00 37.18 3.46
557 558 1.204467 CACAGAGAGAGGTGAGGAAGC 59.796 57.143 0.00 0.00 37.18 3.86
558 559 0.823460 CAGAGAGAGGTGAGGAAGCC 59.177 60.000 0.00 0.00 0.00 4.35
559 560 0.709992 AGAGAGAGGTGAGGAAGCCT 59.290 55.000 0.00 0.00 37.91 4.58
567 568 3.081554 GAGGAAGCCTCCCAAGCA 58.918 61.111 0.00 0.00 44.36 3.91
568 569 1.077858 GAGGAAGCCTCCCAAGCAG 60.078 63.158 0.00 0.00 44.36 4.24
569 570 2.044551 GGAAGCCTCCCAAGCAGG 60.045 66.667 0.00 0.00 35.42 4.85
586 587 3.550431 GGCCCAGGCGCATAGAGA 61.550 66.667 10.83 0.00 43.06 3.10
587 588 2.030262 GCCCAGGCGCATAGAGAG 59.970 66.667 10.83 0.00 0.00 3.20
588 589 2.739784 CCCAGGCGCATAGAGAGG 59.260 66.667 10.83 0.00 0.00 3.69
589 590 1.834378 CCCAGGCGCATAGAGAGGA 60.834 63.158 10.83 0.00 0.00 3.71
590 591 1.664873 CCAGGCGCATAGAGAGGAG 59.335 63.158 10.83 0.00 0.00 3.69
591 592 1.112315 CCAGGCGCATAGAGAGGAGT 61.112 60.000 10.83 0.00 0.00 3.85
592 593 0.031857 CAGGCGCATAGAGAGGAGTG 59.968 60.000 10.83 0.00 0.00 3.51
593 594 1.112315 AGGCGCATAGAGAGGAGTGG 61.112 60.000 10.83 0.00 0.00 4.00
594 595 1.365633 GCGCATAGAGAGGAGTGGG 59.634 63.158 0.30 0.00 0.00 4.61
595 596 1.109920 GCGCATAGAGAGGAGTGGGA 61.110 60.000 0.30 0.00 0.00 4.37
596 597 1.403814 CGCATAGAGAGGAGTGGGAA 58.596 55.000 0.00 0.00 0.00 3.97
597 598 1.067821 CGCATAGAGAGGAGTGGGAAC 59.932 57.143 0.00 0.00 0.00 3.62
598 599 1.067821 GCATAGAGAGGAGTGGGAACG 59.932 57.143 0.00 0.00 0.00 3.95
599 600 2.656002 CATAGAGAGGAGTGGGAACGA 58.344 52.381 0.00 0.00 0.00 3.85
600 601 2.421751 TAGAGAGGAGTGGGAACGAG 57.578 55.000 0.00 0.00 0.00 4.18
601 602 0.699399 AGAGAGGAGTGGGAACGAGA 59.301 55.000 0.00 0.00 0.00 4.04
602 603 1.075698 AGAGAGGAGTGGGAACGAGAA 59.924 52.381 0.00 0.00 0.00 2.87
603 604 1.202817 GAGAGGAGTGGGAACGAGAAC 59.797 57.143 0.00 0.00 0.00 3.01
604 605 0.109226 GAGGAGTGGGAACGAGAACG 60.109 60.000 0.00 0.00 45.75 3.95
605 606 1.080025 GGAGTGGGAACGAGAACGG 60.080 63.158 0.00 0.00 44.46 4.44
606 607 1.737008 GAGTGGGAACGAGAACGGC 60.737 63.158 0.00 0.00 44.46 5.68
607 608 2.741211 GTGGGAACGAGAACGGCC 60.741 66.667 0.00 0.00 44.46 6.13
608 609 2.920912 TGGGAACGAGAACGGCCT 60.921 61.111 0.00 0.00 44.46 5.19
615 616 2.032681 GAGAACGGCCTGCCAAGT 59.967 61.111 9.17 0.00 35.37 3.16
672 673 4.722700 CCTGCCAAGTGGGACCGG 62.723 72.222 0.00 0.00 40.01 5.28
673 674 3.636231 CTGCCAAGTGGGACCGGA 61.636 66.667 9.46 0.00 40.01 5.14
674 675 3.172106 TGCCAAGTGGGACCGGAA 61.172 61.111 9.46 0.00 40.01 4.30
693 694 1.883084 CGCATAGACAGAACGGGGC 60.883 63.158 0.00 0.00 0.00 5.80
694 695 1.523938 GCATAGACAGAACGGGGCC 60.524 63.158 0.00 0.00 0.00 5.80
758 759 3.322466 CGCAGACCCTGTTCCCCT 61.322 66.667 0.00 0.00 33.43 4.79
759 760 2.671682 GCAGACCCTGTTCCCCTC 59.328 66.667 0.00 0.00 33.43 4.30
774 775 3.431725 CTCCCCGCGCCAAGTTTC 61.432 66.667 0.00 0.00 0.00 2.78
802 803 1.361793 CCATTTTCTTGGCGCCAATG 58.638 50.000 40.03 32.10 35.20 2.82
908 921 4.440829 ATCCCCACCGCCGCAATT 62.441 61.111 0.00 0.00 0.00 2.32
943 957 0.749049 CATCCAGATCCACAGAGCGA 59.251 55.000 0.00 0.00 32.16 4.93
948 962 1.065401 CAGATCCACAGAGCGAGAGAC 59.935 57.143 0.00 0.00 32.16 3.36
953 970 0.108898 CACAGAGCGAGAGACAAGGG 60.109 60.000 0.00 0.00 0.00 3.95
954 971 1.153667 CAGAGCGAGAGACAAGGGC 60.154 63.158 0.00 0.00 0.00 5.19
984 1008 5.215252 TCAAGAGATCAAGAAGTTTCCGT 57.785 39.130 0.00 0.00 0.00 4.69
994 1022 2.761208 AGAAGTTTCCGTCGGATCTCAT 59.239 45.455 16.23 6.47 0.00 2.90
1255 1289 4.351054 CCAAGTCCGCCAAGGCCT 62.351 66.667 0.00 0.00 40.77 5.19
1552 1628 2.742372 GCGCGAAGAAGAAGCCCA 60.742 61.111 12.10 0.00 0.00 5.36
1717 1877 0.108567 GTCACCGAAGAGGAAGGCTC 60.109 60.000 0.00 0.00 45.00 4.70
1815 1984 3.403038 CCTGTTCTTGGTTCGTCAGATT 58.597 45.455 0.00 0.00 0.00 2.40
1821 1990 0.036164 TGGTTCGTCAGATTGGTGGG 59.964 55.000 0.00 0.00 0.00 4.61
1823 1992 1.544759 GGTTCGTCAGATTGGTGGGTT 60.545 52.381 0.00 0.00 0.00 4.11
1844 2013 4.471904 TTAGCGATTGAGGTGTGATCTT 57.528 40.909 0.00 0.00 0.00 2.40
1846 2015 2.234661 AGCGATTGAGGTGTGATCTTGA 59.765 45.455 0.00 0.00 0.00 3.02
1858 2027 5.163405 GGTGTGATCTTGAAGAGGCAGTATA 60.163 44.000 0.00 0.00 0.00 1.47
1898 2069 4.183865 TGCTTGAATGGAATCTAGTGTCG 58.816 43.478 0.00 0.00 0.00 4.35
1938 2110 7.729124 ATGAATCAAATCCCTCAAATGTCTT 57.271 32.000 0.00 0.00 0.00 3.01
1985 2293 8.704668 TGAAATAATAGTTCCTGCACTGAGATA 58.295 33.333 0.00 0.00 0.00 1.98
2051 2360 4.586421 TCTGGAGATGCGATTACTGAGATT 59.414 41.667 0.00 0.00 0.00 2.40
2131 2458 9.766277 GAATTGTCTGATCAACTCTGAAAATAC 57.234 33.333 0.00 0.00 38.27 1.89
2137 2464 9.809096 TCTGATCAACTCTGAAAATACTATGTC 57.191 33.333 0.00 0.00 34.49 3.06
2149 2476 2.226962 ACTATGTCCCCGTACTGTGT 57.773 50.000 0.00 0.00 0.00 3.72
2154 2481 1.342174 TGTCCCCGTACTGTGTTCTTC 59.658 52.381 0.00 0.00 0.00 2.87
2228 2626 8.801715 TCTTTGATGCTGTTTCTTACATTTTC 57.198 30.769 0.00 0.00 35.85 2.29
2310 2719 4.065088 TGTTGCTACTGAGATGTGGAAAC 58.935 43.478 0.00 0.00 37.44 2.78
2311 2720 4.065088 GTTGCTACTGAGATGTGGAAACA 58.935 43.478 0.00 0.00 37.06 2.83
2371 2781 1.717194 TTATGTTTGCCGAGGTCGAC 58.283 50.000 7.13 7.13 43.02 4.20
2379 2877 1.226323 CCGAGGTCGACGTGTGATC 60.226 63.158 16.63 0.00 43.02 2.92
2406 2904 7.804843 TGTTGAAATGCTGGAATGAAAAATT 57.195 28.000 0.00 0.00 0.00 1.82
2457 2959 5.123820 TCAAATCCCTACAAAAAGCTGATCG 59.876 40.000 0.00 0.00 0.00 3.69
2468 2970 7.433680 ACAAAAAGCTGATCGAACCTAAAATT 58.566 30.769 0.00 0.00 0.00 1.82
2470 2972 8.764287 CAAAAAGCTGATCGAACCTAAAATTTT 58.236 29.630 8.75 8.75 0.00 1.82
2473 2975 7.078011 AGCTGATCGAACCTAAAATTTTCTC 57.922 36.000 6.72 0.09 0.00 2.87
2569 3142 3.721087 AACCCCTGAAGTATTGTCTGG 57.279 47.619 0.00 0.00 34.70 3.86
2587 3160 6.074648 TGTCTGGTCAACCCTGAAAAATAAT 58.925 36.000 0.00 0.00 42.22 1.28
2588 3161 7.235079 TGTCTGGTCAACCCTGAAAAATAATA 58.765 34.615 0.00 0.00 42.22 0.98
2589 3162 7.175990 TGTCTGGTCAACCCTGAAAAATAATAC 59.824 37.037 0.00 0.00 42.22 1.89
2590 3163 7.393515 GTCTGGTCAACCCTGAAAAATAATACT 59.606 37.037 0.00 0.00 42.22 2.12
2591 3164 7.610305 TCTGGTCAACCCTGAAAAATAATACTC 59.390 37.037 0.00 0.00 38.16 2.59
2592 3165 6.661805 TGGTCAACCCTGAAAAATAATACTCC 59.338 38.462 0.00 0.00 31.88 3.85
2593 3166 6.183360 GGTCAACCCTGAAAAATAATACTCCG 60.183 42.308 0.00 0.00 31.88 4.63
2629 3203 7.232737 TCCTGTACTAAGATCTGAAAGTGTTCA 59.767 37.037 13.30 9.66 41.57 3.18
2674 3248 3.817826 AGGAACTGAACCCCTAGCT 57.182 52.632 0.00 0.00 37.18 3.32
2676 3250 1.630878 AGGAACTGAACCCCTAGCTTG 59.369 52.381 0.00 0.00 37.18 4.01
2679 3253 0.842467 ACTGAACCCCTAGCTTGCCT 60.842 55.000 0.00 0.00 0.00 4.75
2680 3254 1.204146 CTGAACCCCTAGCTTGCCTA 58.796 55.000 0.00 0.00 0.00 3.93
2681 3255 1.771255 CTGAACCCCTAGCTTGCCTAT 59.229 52.381 0.00 0.00 0.00 2.57
2688 3262 1.333177 CTAGCTTGCCTATCGGGTCT 58.667 55.000 0.00 0.00 37.43 3.85
2694 3268 0.535328 TGCCTATCGGGTCTCTCTCG 60.535 60.000 0.00 0.00 42.07 4.04
2699 3273 3.827898 CGGGTCTCTCTCGCCACC 61.828 72.222 0.00 0.00 31.65 4.61
2700 3274 3.462678 GGGTCTCTCTCGCCACCC 61.463 72.222 0.00 0.00 41.93 4.61
2701 3275 2.680352 GGTCTCTCTCGCCACCCA 60.680 66.667 0.00 0.00 0.00 4.51
2702 3276 2.060980 GGTCTCTCTCGCCACCCAT 61.061 63.158 0.00 0.00 0.00 4.00
2703 3277 1.439644 GTCTCTCTCGCCACCCATC 59.560 63.158 0.00 0.00 0.00 3.51
2704 3278 1.000359 TCTCTCTCGCCACCCATCA 60.000 57.895 0.00 0.00 0.00 3.07
2705 3279 0.397675 TCTCTCTCGCCACCCATCAT 60.398 55.000 0.00 0.00 0.00 2.45
2706 3280 0.033228 CTCTCTCGCCACCCATCATC 59.967 60.000 0.00 0.00 0.00 2.92
2707 3281 0.687427 TCTCTCGCCACCCATCATCA 60.687 55.000 0.00 0.00 0.00 3.07
2708 3282 0.531532 CTCTCGCCACCCATCATCAC 60.532 60.000 0.00 0.00 0.00 3.06
2709 3283 1.524621 CTCGCCACCCATCATCACC 60.525 63.158 0.00 0.00 0.00 4.02
2710 3284 1.976132 CTCGCCACCCATCATCACCT 61.976 60.000 0.00 0.00 0.00 4.00
2711 3285 1.524621 CGCCACCCATCATCACCTC 60.525 63.158 0.00 0.00 0.00 3.85
2712 3286 1.152881 GCCACCCATCATCACCTCC 60.153 63.158 0.00 0.00 0.00 4.30
2713 3287 1.639635 GCCACCCATCATCACCTCCT 61.640 60.000 0.00 0.00 0.00 3.69
2714 3288 0.471617 CCACCCATCATCACCTCCTC 59.528 60.000 0.00 0.00 0.00 3.71
2715 3289 0.105593 CACCCATCATCACCTCCTCG 59.894 60.000 0.00 0.00 0.00 4.63
2716 3290 0.325671 ACCCATCATCACCTCCTCGT 60.326 55.000 0.00 0.00 0.00 4.18
2717 3291 0.390860 CCCATCATCACCTCCTCGTC 59.609 60.000 0.00 0.00 0.00 4.20
2718 3292 0.031314 CCATCATCACCTCCTCGTCG 59.969 60.000 0.00 0.00 0.00 5.12
2719 3293 0.741326 CATCATCACCTCCTCGTCGT 59.259 55.000 0.00 0.00 0.00 4.34
2720 3294 1.135139 CATCATCACCTCCTCGTCGTT 59.865 52.381 0.00 0.00 0.00 3.85
2721 3295 0.526211 TCATCACCTCCTCGTCGTTG 59.474 55.000 0.00 0.00 0.00 4.10
2722 3296 0.243907 CATCACCTCCTCGTCGTTGT 59.756 55.000 0.00 0.00 0.00 3.32
2723 3297 0.526662 ATCACCTCCTCGTCGTTGTC 59.473 55.000 0.00 0.00 0.00 3.18
2724 3298 1.442184 CACCTCCTCGTCGTTGTCG 60.442 63.158 0.00 0.00 38.55 4.35
2725 3299 2.178521 CCTCCTCGTCGTTGTCGG 59.821 66.667 0.00 0.00 37.69 4.79
2726 3300 2.330372 CCTCCTCGTCGTTGTCGGA 61.330 63.158 0.00 0.00 37.69 4.55
2727 3301 1.134901 CTCCTCGTCGTTGTCGGAG 59.865 63.158 0.00 0.00 37.69 4.63
2728 3302 2.178521 CCTCGTCGTTGTCGGAGG 59.821 66.667 0.00 0.00 38.44 4.30
2729 3303 2.504244 CTCGTCGTTGTCGGAGGC 60.504 66.667 0.00 0.00 37.69 4.70
2730 3304 3.966026 CTCGTCGTTGTCGGAGGCC 62.966 68.421 0.00 0.00 37.69 5.19
2731 3305 4.052229 CGTCGTTGTCGGAGGCCT 62.052 66.667 3.86 3.86 37.69 5.19
2732 3306 2.342648 GTCGTTGTCGGAGGCCTT 59.657 61.111 6.77 0.00 37.69 4.35
2733 3307 1.737008 GTCGTTGTCGGAGGCCTTC 60.737 63.158 6.77 2.57 37.69 3.46
2734 3308 2.809601 CGTTGTCGGAGGCCTTCG 60.810 66.667 28.60 28.60 0.00 3.79
2735 3309 2.434359 GTTGTCGGAGGCCTTCGG 60.434 66.667 32.89 14.80 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.987272 CTGTTCCAATAGATGATGTAGATGTAA 57.013 33.333 0.00 0.00 0.00 2.41
6 7 8.090831 GCTGTTCCAATAGATGATGTAGATGTA 58.909 37.037 0.00 0.00 0.00 2.29
7 8 6.933521 GCTGTTCCAATAGATGATGTAGATGT 59.066 38.462 0.00 0.00 0.00 3.06
9 10 6.162079 CGCTGTTCCAATAGATGATGTAGAT 58.838 40.000 0.00 0.00 0.00 1.98
10 11 5.069119 ACGCTGTTCCAATAGATGATGTAGA 59.931 40.000 0.00 0.00 0.00 2.59
11 12 5.292765 ACGCTGTTCCAATAGATGATGTAG 58.707 41.667 0.00 0.00 0.00 2.74
12 13 5.276461 ACGCTGTTCCAATAGATGATGTA 57.724 39.130 0.00 0.00 0.00 2.29
13 14 4.142609 ACGCTGTTCCAATAGATGATGT 57.857 40.909 0.00 0.00 0.00 3.06
14 15 5.490139 AAACGCTGTTCCAATAGATGATG 57.510 39.130 0.00 0.00 0.00 3.07
15 16 6.071952 ACAAAAACGCTGTTCCAATAGATGAT 60.072 34.615 0.00 0.00 0.00 2.45
16 17 5.240623 ACAAAAACGCTGTTCCAATAGATGA 59.759 36.000 0.00 0.00 0.00 2.92
17 18 5.460646 ACAAAAACGCTGTTCCAATAGATG 58.539 37.500 0.00 0.00 0.00 2.90
18 19 5.240623 TGACAAAAACGCTGTTCCAATAGAT 59.759 36.000 0.00 0.00 0.00 1.98
19 20 4.576873 TGACAAAAACGCTGTTCCAATAGA 59.423 37.500 0.00 0.00 0.00 1.98
20 21 4.854399 TGACAAAAACGCTGTTCCAATAG 58.146 39.130 0.00 0.00 0.00 1.73
21 22 4.902443 TGACAAAAACGCTGTTCCAATA 57.098 36.364 0.00 0.00 0.00 1.90
22 23 3.791973 TGACAAAAACGCTGTTCCAAT 57.208 38.095 0.00 0.00 0.00 3.16
23 24 3.701241 GATGACAAAAACGCTGTTCCAA 58.299 40.909 0.00 0.00 0.00 3.53
24 25 2.286713 CGATGACAAAAACGCTGTTCCA 60.287 45.455 0.00 0.00 0.00 3.53
25 26 2.286772 ACGATGACAAAAACGCTGTTCC 60.287 45.455 0.00 0.00 0.00 3.62
26 27 2.713976 CACGATGACAAAAACGCTGTTC 59.286 45.455 0.00 0.00 0.00 3.18
27 28 2.096819 ACACGATGACAAAAACGCTGTT 59.903 40.909 0.00 0.00 0.00 3.16
28 29 1.668751 ACACGATGACAAAAACGCTGT 59.331 42.857 0.00 0.00 0.00 4.40
29 30 2.036217 CACACGATGACAAAAACGCTG 58.964 47.619 0.00 0.00 0.00 5.18
30 31 1.937223 TCACACGATGACAAAAACGCT 59.063 42.857 0.00 0.00 29.99 5.07
31 32 2.376915 TCACACGATGACAAAAACGC 57.623 45.000 0.00 0.00 29.99 4.84
42 43 4.454504 GGACCACTTTTTACATCACACGAT 59.545 41.667 0.00 0.00 0.00 3.73
43 44 3.810941 GGACCACTTTTTACATCACACGA 59.189 43.478 0.00 0.00 0.00 4.35
44 45 3.562141 TGGACCACTTTTTACATCACACG 59.438 43.478 0.00 0.00 0.00 4.49
45 46 4.023193 CCTGGACCACTTTTTACATCACAC 60.023 45.833 0.00 0.00 0.00 3.82
46 47 4.141287 CCTGGACCACTTTTTACATCACA 58.859 43.478 0.00 0.00 0.00 3.58
47 48 4.215613 GTCCTGGACCACTTTTTACATCAC 59.784 45.833 16.14 0.00 0.00 3.06
48 49 4.104102 AGTCCTGGACCACTTTTTACATCA 59.896 41.667 22.81 0.00 32.18 3.07
49 50 4.652822 AGTCCTGGACCACTTTTTACATC 58.347 43.478 22.81 0.00 32.18 3.06
50 51 4.724279 AGTCCTGGACCACTTTTTACAT 57.276 40.909 22.81 0.00 32.18 2.29
51 52 5.836024 ATAGTCCTGGACCACTTTTTACA 57.164 39.130 22.81 0.00 32.18 2.41
52 53 7.520451 AAAATAGTCCTGGACCACTTTTTAC 57.480 36.000 22.81 0.00 32.18 2.01
53 54 8.219178 TGTAAAATAGTCCTGGACCACTTTTTA 58.781 33.333 22.81 20.51 32.18 1.52
54 55 7.064229 TGTAAAATAGTCCTGGACCACTTTTT 58.936 34.615 22.81 21.34 32.18 1.94
55 56 6.607019 TGTAAAATAGTCCTGGACCACTTTT 58.393 36.000 22.81 23.21 32.18 2.27
56 57 6.195600 TGTAAAATAGTCCTGGACCACTTT 57.804 37.500 22.81 19.19 32.18 2.66
57 58 5.836024 TGTAAAATAGTCCTGGACCACTT 57.164 39.130 22.81 13.31 32.18 3.16
58 59 5.487488 TGATGTAAAATAGTCCTGGACCACT 59.513 40.000 22.81 7.74 32.18 4.00
59 60 5.741011 TGATGTAAAATAGTCCTGGACCAC 58.259 41.667 22.81 11.57 32.18 4.16
60 61 6.386927 AGATGATGTAAAATAGTCCTGGACCA 59.613 38.462 22.81 10.62 32.18 4.02
61 62 6.831976 AGATGATGTAAAATAGTCCTGGACC 58.168 40.000 22.81 6.63 32.18 4.46
62 63 9.429359 CATAGATGATGTAAAATAGTCCTGGAC 57.571 37.037 19.20 19.20 0.00 4.02
63 64 8.097038 GCATAGATGATGTAAAATAGTCCTGGA 58.903 37.037 0.00 0.00 37.90 3.86
64 65 8.099537 AGCATAGATGATGTAAAATAGTCCTGG 58.900 37.037 0.00 0.00 37.90 4.45
65 66 9.149225 GAGCATAGATGATGTAAAATAGTCCTG 57.851 37.037 0.00 0.00 37.90 3.86
66 67 9.099071 AGAGCATAGATGATGTAAAATAGTCCT 57.901 33.333 0.00 0.00 37.90 3.85
67 68 9.717942 AAGAGCATAGATGATGTAAAATAGTCC 57.282 33.333 0.00 0.00 37.90 3.85
75 76 9.617523 TCATTTTGAAGAGCATAGATGATGTAA 57.382 29.630 0.00 0.00 37.90 2.41
76 77 9.617523 TTCATTTTGAAGAGCATAGATGATGTA 57.382 29.630 0.00 0.00 33.48 2.29
77 78 8.515695 TTCATTTTGAAGAGCATAGATGATGT 57.484 30.769 0.00 0.00 33.48 3.06
78 79 9.797556 TTTTCATTTTGAAGAGCATAGATGATG 57.202 29.630 0.00 0.00 37.70 3.07
112 113 9.511272 ACCTTTGTATTTTCGTAGTTTTATCCT 57.489 29.630 0.00 0.00 0.00 3.24
113 114 9.550811 CACCTTTGTATTTTCGTAGTTTTATCC 57.449 33.333 0.00 0.00 0.00 2.59
114 115 9.550811 CCACCTTTGTATTTTCGTAGTTTTATC 57.449 33.333 0.00 0.00 0.00 1.75
115 116 9.287373 TCCACCTTTGTATTTTCGTAGTTTTAT 57.713 29.630 0.00 0.00 0.00 1.40
116 117 8.558700 GTCCACCTTTGTATTTTCGTAGTTTTA 58.441 33.333 0.00 0.00 0.00 1.52
117 118 7.067251 TGTCCACCTTTGTATTTTCGTAGTTTT 59.933 33.333 0.00 0.00 0.00 2.43
118 119 6.543100 TGTCCACCTTTGTATTTTCGTAGTTT 59.457 34.615 0.00 0.00 0.00 2.66
119 120 6.056884 TGTCCACCTTTGTATTTTCGTAGTT 58.943 36.000 0.00 0.00 0.00 2.24
120 121 5.613329 TGTCCACCTTTGTATTTTCGTAGT 58.387 37.500 0.00 0.00 0.00 2.73
121 122 6.403200 CCATGTCCACCTTTGTATTTTCGTAG 60.403 42.308 0.00 0.00 0.00 3.51
122 123 5.413213 CCATGTCCACCTTTGTATTTTCGTA 59.587 40.000 0.00 0.00 0.00 3.43
123 124 4.217550 CCATGTCCACCTTTGTATTTTCGT 59.782 41.667 0.00 0.00 0.00 3.85
124 125 4.217550 ACCATGTCCACCTTTGTATTTTCG 59.782 41.667 0.00 0.00 0.00 3.46
125 126 5.722021 ACCATGTCCACCTTTGTATTTTC 57.278 39.130 0.00 0.00 0.00 2.29
126 127 5.011635 GGAACCATGTCCACCTTTGTATTTT 59.988 40.000 0.00 0.00 37.65 1.82
127 128 4.526650 GGAACCATGTCCACCTTTGTATTT 59.473 41.667 0.00 0.00 37.65 1.40
128 129 4.086457 GGAACCATGTCCACCTTTGTATT 58.914 43.478 0.00 0.00 37.65 1.89
129 130 3.075283 TGGAACCATGTCCACCTTTGTAT 59.925 43.478 0.95 0.00 42.97 2.29
130 131 2.443632 TGGAACCATGTCCACCTTTGTA 59.556 45.455 0.95 0.00 42.97 2.41
131 132 1.216678 TGGAACCATGTCCACCTTTGT 59.783 47.619 0.95 0.00 42.97 2.83
132 133 1.993956 TGGAACCATGTCCACCTTTG 58.006 50.000 0.95 0.00 42.97 2.77
138 139 1.599518 GCACGTGGAACCATGTCCA 60.600 57.895 18.88 0.95 45.72 4.02
139 140 1.599518 TGCACGTGGAACCATGTCC 60.600 57.895 18.88 7.84 43.50 4.02
140 141 1.574428 GTGCACGTGGAACCATGTC 59.426 57.895 18.88 10.76 43.50 3.06
141 142 1.896660 GGTGCACGTGGAACCATGT 60.897 57.895 15.03 12.29 45.93 3.21
142 143 2.625823 GGGTGCACGTGGAACCATG 61.626 63.158 36.03 11.02 43.42 3.66
143 144 2.282180 GGGTGCACGTGGAACCAT 60.282 61.111 36.03 0.00 43.42 3.55
145 146 2.282180 ATGGGTGCACGTGGAACC 60.282 61.111 34.74 34.74 44.30 3.62
146 147 1.599518 TGATGGGTGCACGTGGAAC 60.600 57.895 17.81 17.81 0.00 3.62
147 148 1.599518 GTGATGGGTGCACGTGGAA 60.600 57.895 18.88 0.00 0.00 3.53
148 149 2.031919 GTGATGGGTGCACGTGGA 59.968 61.111 18.88 12.78 0.00 4.02
149 150 3.055719 GGTGATGGGTGCACGTGG 61.056 66.667 18.88 0.00 37.13 4.94
150 151 3.055719 GGGTGATGGGTGCACGTG 61.056 66.667 12.28 12.28 37.13 4.49
151 152 2.424842 AATGGGTGATGGGTGCACGT 62.425 55.000 11.45 0.00 37.13 4.49
152 153 1.656818 GAATGGGTGATGGGTGCACG 61.657 60.000 11.45 0.00 37.13 5.34
153 154 1.322538 GGAATGGGTGATGGGTGCAC 61.323 60.000 8.80 8.80 35.56 4.57
154 155 1.000233 GGAATGGGTGATGGGTGCA 60.000 57.895 0.00 0.00 0.00 4.57
155 156 0.614415 TTGGAATGGGTGATGGGTGC 60.614 55.000 0.00 0.00 0.00 5.01
156 157 1.935799 TTTGGAATGGGTGATGGGTG 58.064 50.000 0.00 0.00 0.00 4.61
157 158 2.711895 TTTTGGAATGGGTGATGGGT 57.288 45.000 0.00 0.00 0.00 4.51
158 159 4.289245 AGTATTTTGGAATGGGTGATGGG 58.711 43.478 0.00 0.00 0.00 4.00
159 160 6.364701 TCTAGTATTTTGGAATGGGTGATGG 58.635 40.000 0.00 0.00 0.00 3.51
160 161 8.469309 AATCTAGTATTTTGGAATGGGTGATG 57.531 34.615 0.00 0.00 0.00 3.07
161 162 9.492730 AAAATCTAGTATTTTGGAATGGGTGAT 57.507 29.630 10.29 0.00 30.84 3.06
162 163 8.893563 AAAATCTAGTATTTTGGAATGGGTGA 57.106 30.769 10.29 0.00 30.84 4.02
232 233 9.483916 TGAGTAGAATATTCGACAAAGTTTGAA 57.516 29.630 24.79 6.64 35.59 2.69
233 234 8.922676 GTGAGTAGAATATTCGACAAAGTTTGA 58.077 33.333 24.79 0.00 35.59 2.69
234 235 8.708742 TGTGAGTAGAATATTCGACAAAGTTTG 58.291 33.333 24.79 14.13 35.59 2.93
235 236 8.827177 TGTGAGTAGAATATTCGACAAAGTTT 57.173 30.769 24.79 8.15 35.59 2.66
236 237 8.873830 CATGTGAGTAGAATATTCGACAAAGTT 58.126 33.333 24.79 8.75 35.59 2.66
237 238 8.035394 ACATGTGAGTAGAATATTCGACAAAGT 58.965 33.333 24.79 13.85 35.59 2.66
238 239 8.323854 CACATGTGAGTAGAATATTCGACAAAG 58.676 37.037 24.79 13.38 35.59 2.77
239 240 8.032451 TCACATGTGAGTAGAATATTCGACAAA 58.968 33.333 24.56 13.10 35.59 2.83
240 241 7.543756 TCACATGTGAGTAGAATATTCGACAA 58.456 34.615 24.56 13.39 35.59 3.18
241 242 7.095695 TCACATGTGAGTAGAATATTCGACA 57.904 36.000 24.56 16.22 35.59 4.35
242 243 7.987268 TTCACATGTGAGTAGAATATTCGAC 57.013 36.000 26.48 18.00 41.13 4.20
243 244 9.599866 AATTTCACATGTGAGTAGAATATTCGA 57.400 29.630 26.48 6.30 41.13 3.71
277 278 9.912634 CAATAAGAATACCACATGTGTCTTTTT 57.087 29.630 25.54 21.73 35.48 1.94
278 279 9.295825 TCAATAAGAATACCACATGTGTCTTTT 57.704 29.630 25.54 18.47 35.48 2.27
279 280 8.862325 TCAATAAGAATACCACATGTGTCTTT 57.138 30.769 25.54 15.96 35.48 2.52
280 281 8.862325 TTCAATAAGAATACCACATGTGTCTT 57.138 30.769 24.43 24.43 36.87 3.01
281 282 8.321353 TCTTCAATAAGAATACCACATGTGTCT 58.679 33.333 23.79 16.56 38.81 3.41
282 283 8.492673 TCTTCAATAAGAATACCACATGTGTC 57.507 34.615 23.79 14.60 38.81 3.67
283 284 8.862325 TTCTTCAATAAGAATACCACATGTGT 57.138 30.769 23.79 14.29 44.85 3.72
300 301 9.748708 TTGAGATTCGATTTTGTTTTCTTCAAT 57.251 25.926 0.00 0.00 0.00 2.57
301 302 9.579768 TTTGAGATTCGATTTTGTTTTCTTCAA 57.420 25.926 0.00 0.00 0.00 2.69
302 303 9.579768 TTTTGAGATTCGATTTTGTTTTCTTCA 57.420 25.926 0.00 0.00 0.00 3.02
305 306 9.748708 TGATTTTGAGATTCGATTTTGTTTTCT 57.251 25.926 0.00 0.00 0.00 2.52
306 307 9.783425 GTGATTTTGAGATTCGATTTTGTTTTC 57.217 29.630 0.00 0.00 0.00 2.29
307 308 8.479280 CGTGATTTTGAGATTCGATTTTGTTTT 58.521 29.630 0.00 0.00 0.00 2.43
308 309 7.114811 CCGTGATTTTGAGATTCGATTTTGTTT 59.885 33.333 0.00 0.00 0.00 2.83
309 310 6.582295 CCGTGATTTTGAGATTCGATTTTGTT 59.418 34.615 0.00 0.00 0.00 2.83
310 311 6.072728 TCCGTGATTTTGAGATTCGATTTTGT 60.073 34.615 0.00 0.00 0.00 2.83
311 312 6.314018 TCCGTGATTTTGAGATTCGATTTTG 58.686 36.000 0.00 0.00 0.00 2.44
312 313 6.494893 TCCGTGATTTTGAGATTCGATTTT 57.505 33.333 0.00 0.00 0.00 1.82
313 314 6.094048 ACATCCGTGATTTTGAGATTCGATTT 59.906 34.615 0.00 0.00 0.00 2.17
314 315 5.586243 ACATCCGTGATTTTGAGATTCGATT 59.414 36.000 0.00 0.00 0.00 3.34
315 316 5.118990 ACATCCGTGATTTTGAGATTCGAT 58.881 37.500 0.00 0.00 0.00 3.59
316 317 4.503910 ACATCCGTGATTTTGAGATTCGA 58.496 39.130 0.00 0.00 0.00 3.71
317 318 4.329801 TGACATCCGTGATTTTGAGATTCG 59.670 41.667 0.00 0.00 0.00 3.34
318 319 5.801350 TGACATCCGTGATTTTGAGATTC 57.199 39.130 0.00 0.00 0.00 2.52
319 320 6.764308 AATGACATCCGTGATTTTGAGATT 57.236 33.333 0.00 0.00 0.00 2.40
320 321 6.600822 AGAAATGACATCCGTGATTTTGAGAT 59.399 34.615 0.00 0.00 38.80 2.75
321 322 5.939883 AGAAATGACATCCGTGATTTTGAGA 59.060 36.000 0.00 0.00 38.80 3.27
322 323 6.187125 AGAAATGACATCCGTGATTTTGAG 57.813 37.500 0.00 0.00 38.80 3.02
323 324 6.573664 AAGAAATGACATCCGTGATTTTGA 57.426 33.333 0.00 0.00 38.80 2.69
324 325 5.509272 CGAAGAAATGACATCCGTGATTTTG 59.491 40.000 0.00 0.00 38.80 2.44
325 326 5.181245 ACGAAGAAATGACATCCGTGATTTT 59.819 36.000 0.00 0.00 38.80 1.82
326 327 4.695455 ACGAAGAAATGACATCCGTGATTT 59.305 37.500 0.00 0.00 40.99 2.17
327 328 4.093408 CACGAAGAAATGACATCCGTGATT 59.907 41.667 15.66 0.00 45.75 2.57
328 329 3.618594 CACGAAGAAATGACATCCGTGAT 59.381 43.478 15.66 0.00 45.75 3.06
329 330 2.993220 CACGAAGAAATGACATCCGTGA 59.007 45.455 15.66 0.00 45.75 4.35
330 331 2.993220 TCACGAAGAAATGACATCCGTG 59.007 45.455 15.05 15.05 44.71 4.94
331 332 3.313012 TCACGAAGAAATGACATCCGT 57.687 42.857 0.00 0.00 0.00 4.69
332 333 4.661993 TTTCACGAAGAAATGACATCCG 57.338 40.909 0.00 0.00 41.17 4.18
348 349 0.648441 TGTTGCGTGTCGAGTTTCAC 59.352 50.000 0.00 0.00 0.00 3.18
349 350 1.577468 ATGTTGCGTGTCGAGTTTCA 58.423 45.000 0.00 0.00 0.00 2.69
350 351 2.221055 AGAATGTTGCGTGTCGAGTTTC 59.779 45.455 0.00 0.00 0.00 2.78
351 352 2.210116 AGAATGTTGCGTGTCGAGTTT 58.790 42.857 0.00 0.00 0.00 2.66
352 353 1.865865 AGAATGTTGCGTGTCGAGTT 58.134 45.000 0.00 0.00 0.00 3.01
353 354 1.865865 AAGAATGTTGCGTGTCGAGT 58.134 45.000 0.00 0.00 0.00 4.18
354 355 2.949714 AAAGAATGTTGCGTGTCGAG 57.050 45.000 0.00 0.00 0.00 4.04
355 356 2.609916 TCAAAAGAATGTTGCGTGTCGA 59.390 40.909 0.00 0.00 31.83 4.20
356 357 2.980586 TCAAAAGAATGTTGCGTGTCG 58.019 42.857 0.00 0.00 31.83 4.35
357 358 5.888412 AAATCAAAAGAATGTTGCGTGTC 57.112 34.783 0.00 0.00 31.83 3.67
358 359 7.945033 ATAAAATCAAAAGAATGTTGCGTGT 57.055 28.000 0.00 0.00 31.83 4.49
377 378 9.765795 CGCCCCCATTGTAAATAAATAATAAAA 57.234 29.630 0.00 0.00 0.00 1.52
378 379 8.925338 ACGCCCCCATTGTAAATAAATAATAAA 58.075 29.630 0.00 0.00 0.00 1.40
379 380 8.361139 CACGCCCCCATTGTAAATAAATAATAA 58.639 33.333 0.00 0.00 0.00 1.40
380 381 7.506261 ACACGCCCCCATTGTAAATAAATAATA 59.494 33.333 0.00 0.00 0.00 0.98
381 382 6.325286 ACACGCCCCCATTGTAAATAAATAAT 59.675 34.615 0.00 0.00 0.00 1.28
382 383 5.657302 ACACGCCCCCATTGTAAATAAATAA 59.343 36.000 0.00 0.00 0.00 1.40
383 384 5.067936 CACACGCCCCCATTGTAAATAAATA 59.932 40.000 0.00 0.00 0.00 1.40
384 385 4.027437 ACACGCCCCCATTGTAAATAAAT 58.973 39.130 0.00 0.00 0.00 1.40
385 386 3.193691 CACACGCCCCCATTGTAAATAAA 59.806 43.478 0.00 0.00 0.00 1.40
386 387 2.755655 CACACGCCCCCATTGTAAATAA 59.244 45.455 0.00 0.00 0.00 1.40
387 388 2.370349 CACACGCCCCCATTGTAAATA 58.630 47.619 0.00 0.00 0.00 1.40
388 389 1.181786 CACACGCCCCCATTGTAAAT 58.818 50.000 0.00 0.00 0.00 1.40
389 390 0.896019 CCACACGCCCCCATTGTAAA 60.896 55.000 0.00 0.00 0.00 2.01
390 391 1.303724 CCACACGCCCCCATTGTAA 60.304 57.895 0.00 0.00 0.00 2.41
391 392 1.780107 TTCCACACGCCCCCATTGTA 61.780 55.000 0.00 0.00 0.00 2.41
392 393 3.140073 TTCCACACGCCCCCATTGT 62.140 57.895 0.00 0.00 0.00 2.71
393 394 2.282816 TTCCACACGCCCCCATTG 60.283 61.111 0.00 0.00 0.00 2.82
394 395 2.282887 GTTCCACACGCCCCCATT 60.283 61.111 0.00 0.00 0.00 3.16
395 396 4.360405 GGTTCCACACGCCCCCAT 62.360 66.667 0.00 0.00 0.00 4.00
399 400 3.785122 AACCTGGTTCCACACGCCC 62.785 63.158 6.18 0.00 0.00 6.13
400 401 1.792118 GAAACCTGGTTCCACACGCC 61.792 60.000 13.36 0.00 0.00 5.68
401 402 1.098712 TGAAACCTGGTTCCACACGC 61.099 55.000 13.36 0.00 0.00 5.34
402 403 1.384525 TTGAAACCTGGTTCCACACG 58.615 50.000 13.36 0.00 0.00 4.49
403 404 3.878160 TTTTGAAACCTGGTTCCACAC 57.122 42.857 13.36 3.56 0.00 3.82
421 422 7.419287 GGGTTAGTTTTAGGGACAATGGTTTTT 60.419 37.037 0.00 0.00 0.00 1.94
422 423 6.042322 GGGTTAGTTTTAGGGACAATGGTTTT 59.958 38.462 0.00 0.00 0.00 2.43
423 424 5.541101 GGGTTAGTTTTAGGGACAATGGTTT 59.459 40.000 0.00 0.00 0.00 3.27
424 425 5.081728 GGGTTAGTTTTAGGGACAATGGTT 58.918 41.667 0.00 0.00 0.00 3.67
425 426 4.106663 TGGGTTAGTTTTAGGGACAATGGT 59.893 41.667 0.00 0.00 0.00 3.55
426 427 4.668636 TGGGTTAGTTTTAGGGACAATGG 58.331 43.478 0.00 0.00 0.00 3.16
427 428 6.295067 CCTTTGGGTTAGTTTTAGGGACAATG 60.295 42.308 0.00 0.00 0.00 2.82
428 429 5.778241 CCTTTGGGTTAGTTTTAGGGACAAT 59.222 40.000 0.00 0.00 0.00 2.71
429 430 5.141910 CCTTTGGGTTAGTTTTAGGGACAA 58.858 41.667 0.00 0.00 0.00 3.18
430 431 4.168479 ACCTTTGGGTTAGTTTTAGGGACA 59.832 41.667 0.00 0.00 44.73 4.02
431 432 4.733165 ACCTTTGGGTTAGTTTTAGGGAC 58.267 43.478 0.00 0.00 44.73 4.46
432 433 6.527570 TTACCTTTGGGTTAGTTTTAGGGA 57.472 37.500 0.00 0.00 44.73 4.20
433 434 8.111545 AGTATTACCTTTGGGTTAGTTTTAGGG 58.888 37.037 0.00 0.00 44.73 3.53
467 468 8.714179 CGTGTATTCATTTAAACTTGGTAGACA 58.286 33.333 0.00 0.00 0.00 3.41
468 469 8.928733 TCGTGTATTCATTTAAACTTGGTAGAC 58.071 33.333 0.00 0.00 0.00 2.59
469 470 8.928733 GTCGTGTATTCATTTAAACTTGGTAGA 58.071 33.333 0.00 0.00 0.00 2.59
470 471 8.932791 AGTCGTGTATTCATTTAAACTTGGTAG 58.067 33.333 0.00 0.00 0.00 3.18
471 472 8.836268 AGTCGTGTATTCATTTAAACTTGGTA 57.164 30.769 0.00 0.00 0.00 3.25
472 473 7.739498 AGTCGTGTATTCATTTAAACTTGGT 57.261 32.000 0.00 0.00 0.00 3.67
473 474 8.073768 ACAAGTCGTGTATTCATTTAAACTTGG 58.926 33.333 13.89 0.10 43.18 3.61
474 475 8.891928 CACAAGTCGTGTATTCATTTAAACTTG 58.108 33.333 9.23 9.23 44.00 3.16
491 492 5.049167 TCGTTTGGTTTATACACAAGTCGT 58.951 37.500 0.00 0.00 0.00 4.34
492 493 5.579384 TCGTTTGGTTTATACACAAGTCG 57.421 39.130 0.00 0.00 0.00 4.18
493 494 7.181143 TCTTCGTTTGGTTTATACACAAGTC 57.819 36.000 0.00 0.00 0.00 3.01
494 495 7.739498 ATCTTCGTTTGGTTTATACACAAGT 57.261 32.000 0.00 0.00 0.00 3.16
503 504 8.732531 CCCAAAGTAATATCTTCGTTTGGTTTA 58.267 33.333 10.02 0.00 41.50 2.01
504 505 7.599171 CCCAAAGTAATATCTTCGTTTGGTTT 58.401 34.615 10.02 0.00 41.50 3.27
505 506 6.349860 GCCCAAAGTAATATCTTCGTTTGGTT 60.350 38.462 10.02 0.00 41.50 3.67
506 507 5.124936 GCCCAAAGTAATATCTTCGTTTGGT 59.875 40.000 10.02 0.00 41.50 3.67
507 508 5.449999 GGCCCAAAGTAATATCTTCGTTTGG 60.450 44.000 0.00 4.92 42.33 3.28
508 509 5.449999 GGGCCCAAAGTAATATCTTCGTTTG 60.450 44.000 19.95 0.00 0.00 2.93
509 510 4.643334 GGGCCCAAAGTAATATCTTCGTTT 59.357 41.667 19.95 0.00 0.00 3.60
510 511 4.204799 GGGCCCAAAGTAATATCTTCGTT 58.795 43.478 19.95 0.00 0.00 3.85
511 512 3.201266 TGGGCCCAAAGTAATATCTTCGT 59.799 43.478 26.33 0.00 0.00 3.85
512 513 3.564225 GTGGGCCCAAAGTAATATCTTCG 59.436 47.826 30.64 0.00 0.00 3.79
513 514 4.580580 CAGTGGGCCCAAAGTAATATCTTC 59.419 45.833 30.64 9.34 0.00 2.87
514 515 4.536765 CAGTGGGCCCAAAGTAATATCTT 58.463 43.478 30.64 0.00 0.00 2.40
515 516 3.688414 GCAGTGGGCCCAAAGTAATATCT 60.688 47.826 30.64 13.61 36.11 1.98
516 517 2.623416 GCAGTGGGCCCAAAGTAATATC 59.377 50.000 30.64 11.07 36.11 1.63
517 518 2.024464 TGCAGTGGGCCCAAAGTAATAT 60.024 45.455 30.64 1.79 43.89 1.28
518 519 1.356059 TGCAGTGGGCCCAAAGTAATA 59.644 47.619 30.64 6.62 43.89 0.98
519 520 0.114168 TGCAGTGGGCCCAAAGTAAT 59.886 50.000 30.64 5.45 43.89 1.89
520 521 0.825840 GTGCAGTGGGCCCAAAGTAA 60.826 55.000 30.64 8.90 43.89 2.24
521 522 1.228429 GTGCAGTGGGCCCAAAGTA 60.228 57.895 30.64 19.12 43.89 2.24
522 523 2.521708 GTGCAGTGGGCCCAAAGT 60.522 61.111 30.64 12.05 43.89 2.66
523 524 2.521465 TGTGCAGTGGGCCCAAAG 60.521 61.111 30.64 23.29 43.89 2.77
524 525 2.521465 CTGTGCAGTGGGCCCAAA 60.521 61.111 30.64 10.18 43.89 3.28
525 526 3.496309 CTCTGTGCAGTGGGCCCAA 62.496 63.158 30.64 8.29 43.89 4.12
526 527 3.957586 CTCTGTGCAGTGGGCCCA 61.958 66.667 24.45 24.45 43.89 5.36
527 528 3.618780 CTCTCTGTGCAGTGGGCCC 62.619 68.421 17.59 17.59 43.89 5.80
528 529 2.046507 CTCTCTGTGCAGTGGGCC 60.047 66.667 0.00 0.00 43.89 5.80
529 530 1.079266 CTCTCTCTGTGCAGTGGGC 60.079 63.158 0.00 0.00 45.13 5.36
530 531 1.190833 ACCTCTCTCTGTGCAGTGGG 61.191 60.000 0.00 0.00 0.00 4.61
531 532 0.037512 CACCTCTCTCTGTGCAGTGG 60.038 60.000 0.00 0.00 0.00 4.00
532 533 0.964700 TCACCTCTCTCTGTGCAGTG 59.035 55.000 0.00 0.00 32.51 3.66
533 534 1.255882 CTCACCTCTCTCTGTGCAGT 58.744 55.000 0.00 0.00 32.51 4.40
534 535 0.531657 CCTCACCTCTCTCTGTGCAG 59.468 60.000 0.00 0.00 32.51 4.41
535 536 0.113190 TCCTCACCTCTCTCTGTGCA 59.887 55.000 0.00 0.00 32.51 4.57
536 537 1.204467 CTTCCTCACCTCTCTCTGTGC 59.796 57.143 0.00 0.00 32.51 4.57
537 538 1.204467 GCTTCCTCACCTCTCTCTGTG 59.796 57.143 0.00 0.00 0.00 3.66
538 539 1.555967 GCTTCCTCACCTCTCTCTGT 58.444 55.000 0.00 0.00 0.00 3.41
539 540 0.823460 GGCTTCCTCACCTCTCTCTG 59.177 60.000 0.00 0.00 0.00 3.35
540 541 0.709992 AGGCTTCCTCACCTCTCTCT 59.290 55.000 0.00 0.00 0.00 3.10
541 542 3.298320 AGGCTTCCTCACCTCTCTC 57.702 57.895 0.00 0.00 0.00 3.20
551 552 2.610519 CCTGCTTGGGAGGCTTCCT 61.611 63.158 14.33 0.00 43.49 3.36
552 553 2.044551 CCTGCTTGGGAGGCTTCC 60.045 66.667 4.31 4.31 43.23 3.46
566 567 4.943252 CTATGCGCCTGGGCCCTG 62.943 72.222 25.70 23.45 37.98 4.45
568 569 4.632974 CTCTATGCGCCTGGGCCC 62.633 72.222 17.59 17.59 37.98 5.80
569 570 3.527775 CTCTCTATGCGCCTGGGCC 62.528 68.421 4.18 0.00 37.98 5.80
570 571 2.030262 CTCTCTATGCGCCTGGGC 59.970 66.667 4.18 0.82 37.85 5.36
571 572 1.814772 CTCCTCTCTATGCGCCTGGG 61.815 65.000 4.18 0.00 0.00 4.45
572 573 1.112315 ACTCCTCTCTATGCGCCTGG 61.112 60.000 4.18 0.00 0.00 4.45
573 574 0.031857 CACTCCTCTCTATGCGCCTG 59.968 60.000 4.18 0.00 0.00 4.85
574 575 1.112315 CCACTCCTCTCTATGCGCCT 61.112 60.000 4.18 0.00 0.00 5.52
575 576 1.365633 CCACTCCTCTCTATGCGCC 59.634 63.158 4.18 0.00 0.00 6.53
576 577 1.109920 TCCCACTCCTCTCTATGCGC 61.110 60.000 0.00 0.00 0.00 6.09
577 578 1.067821 GTTCCCACTCCTCTCTATGCG 59.932 57.143 0.00 0.00 0.00 4.73
578 579 1.067821 CGTTCCCACTCCTCTCTATGC 59.932 57.143 0.00 0.00 0.00 3.14
579 580 2.621055 CTCGTTCCCACTCCTCTCTATG 59.379 54.545 0.00 0.00 0.00 2.23
580 581 2.510382 TCTCGTTCCCACTCCTCTCTAT 59.490 50.000 0.00 0.00 0.00 1.98
581 582 1.914108 TCTCGTTCCCACTCCTCTCTA 59.086 52.381 0.00 0.00 0.00 2.43
582 583 0.699399 TCTCGTTCCCACTCCTCTCT 59.301 55.000 0.00 0.00 0.00 3.10
583 584 1.202817 GTTCTCGTTCCCACTCCTCTC 59.797 57.143 0.00 0.00 0.00 3.20
584 585 1.258676 GTTCTCGTTCCCACTCCTCT 58.741 55.000 0.00 0.00 0.00 3.69
585 586 0.109226 CGTTCTCGTTCCCACTCCTC 60.109 60.000 0.00 0.00 0.00 3.71
586 587 1.533469 CCGTTCTCGTTCCCACTCCT 61.533 60.000 0.00 0.00 35.01 3.69
587 588 1.080025 CCGTTCTCGTTCCCACTCC 60.080 63.158 0.00 0.00 35.01 3.85
588 589 1.737008 GCCGTTCTCGTTCCCACTC 60.737 63.158 0.00 0.00 35.01 3.51
589 590 2.342648 GCCGTTCTCGTTCCCACT 59.657 61.111 0.00 0.00 35.01 4.00
590 591 2.741211 GGCCGTTCTCGTTCCCAC 60.741 66.667 0.00 0.00 35.01 4.61
591 592 2.920912 AGGCCGTTCTCGTTCCCA 60.921 61.111 0.00 0.00 35.01 4.37
592 593 2.434359 CAGGCCGTTCTCGTTCCC 60.434 66.667 0.00 0.00 35.01 3.97
593 594 3.119096 GCAGGCCGTTCTCGTTCC 61.119 66.667 0.00 0.00 35.01 3.62
594 595 3.119096 GGCAGGCCGTTCTCGTTC 61.119 66.667 0.00 0.00 35.01 3.95
595 596 3.469863 TTGGCAGGCCGTTCTCGTT 62.470 57.895 5.74 0.00 39.42 3.85
596 597 3.883744 CTTGGCAGGCCGTTCTCGT 62.884 63.158 5.74 0.00 39.42 4.18
597 598 3.121030 CTTGGCAGGCCGTTCTCG 61.121 66.667 5.74 0.00 39.42 4.04
598 599 2.032681 ACTTGGCAGGCCGTTCTC 59.967 61.111 5.74 0.00 39.42 2.87
599 600 2.281761 CACTTGGCAGGCCGTTCT 60.282 61.111 5.74 0.00 39.42 3.01
600 601 3.365265 CCACTTGGCAGGCCGTTC 61.365 66.667 5.74 0.00 39.42 3.95
601 602 4.974721 CCCACTTGGCAGGCCGTT 62.975 66.667 5.74 0.00 39.42 4.44
606 607 3.574074 CTGGGTCCCACTTGGCAGG 62.574 68.421 6.47 0.00 0.00 4.85
607 608 2.034687 CTGGGTCCCACTTGGCAG 59.965 66.667 6.47 0.00 0.00 4.85
608 609 2.776526 ACTGGGTCCCACTTGGCA 60.777 61.111 6.47 0.00 0.00 4.92
615 616 2.997315 CTCTGCGACTGGGTCCCA 60.997 66.667 11.11 11.11 0.00 4.37
619 620 1.680651 CCTCTCTCTGCGACTGGGT 60.681 63.158 0.00 0.00 0.00 4.51
630 631 2.776913 CCGTTCCCGCTCCTCTCTC 61.777 68.421 0.00 0.00 0.00 3.20
671 672 1.278238 CCGTTCTGTCTATGCGTTCC 58.722 55.000 0.00 0.00 0.00 3.62
672 673 1.278238 CCCGTTCTGTCTATGCGTTC 58.722 55.000 0.00 0.00 0.00 3.95
673 674 0.108329 CCCCGTTCTGTCTATGCGTT 60.108 55.000 0.00 0.00 0.00 4.84
674 675 1.515954 CCCCGTTCTGTCTATGCGT 59.484 57.895 0.00 0.00 0.00 5.24
757 758 3.431725 GAAACTTGGCGCGGGGAG 61.432 66.667 8.83 0.00 0.00 4.30
758 759 2.969300 AAAGAAACTTGGCGCGGGGA 62.969 55.000 8.83 0.00 0.00 4.81
759 760 2.082629 AAAAGAAACTTGGCGCGGGG 62.083 55.000 8.83 0.00 0.00 5.73
773 774 4.513198 CCAAGAAAATGGCGGTAAAAGA 57.487 40.909 0.00 0.00 32.78 2.52
802 803 0.106318 AATTGAGCAGAGGGGATGGC 60.106 55.000 0.00 0.00 0.00 4.40
806 807 0.625849 GGGAAATTGAGCAGAGGGGA 59.374 55.000 0.00 0.00 0.00 4.81
808 809 1.379642 GCGGGAAATTGAGCAGAGGG 61.380 60.000 0.00 0.00 0.00 4.30
908 921 2.314852 TGGATGAAGGTGAGTAGGGAGA 59.685 50.000 0.00 0.00 0.00 3.71
948 962 4.794648 TTGATCCGGCGGCCCTTG 62.795 66.667 23.83 2.21 0.00 3.61
953 970 1.666234 GATCTCTTGATCCGGCGGC 60.666 63.158 23.83 9.13 42.35 6.53
954 971 0.104855 TTGATCTCTTGATCCGGCGG 59.895 55.000 22.51 22.51 46.34 6.13
978 995 2.418197 GGTGAATGAGATCCGACGGAAA 60.418 50.000 22.55 7.53 34.34 3.13
982 1006 2.130395 CATGGTGAATGAGATCCGACG 58.870 52.381 0.00 0.00 38.72 5.12
984 1008 2.118679 ACCATGGTGAATGAGATCCGA 58.881 47.619 18.99 0.00 38.72 4.55
1252 1286 1.002011 GGACCTTGGACTTGGAGGC 60.002 63.158 0.00 0.00 33.78 4.70
1255 1289 2.747686 GCGGACCTTGGACTTGGA 59.252 61.111 0.00 0.00 0.00 3.53
1481 1557 1.999071 CTCGTCGGAGAGCTTCCTGG 61.999 65.000 11.56 0.00 44.41 4.45
1576 1652 1.593787 CAGCCTTCTTCCTGAGCGA 59.406 57.895 0.00 0.00 0.00 4.93
1638 1714 0.392706 TCTTCAGCGACTTCTTGGCA 59.607 50.000 0.00 0.00 0.00 4.92
1641 1717 2.732412 TCCTCTTCAGCGACTTCTTG 57.268 50.000 0.00 0.00 0.00 3.02
1698 1858 0.108567 GAGCCTTCCTCTTCGGTGAC 60.109 60.000 0.00 0.00 37.60 3.67
1815 1984 1.339631 CCTCAATCGCTAAACCCACCA 60.340 52.381 0.00 0.00 0.00 4.17
1821 1990 4.184629 AGATCACACCTCAATCGCTAAAC 58.815 43.478 0.00 0.00 0.00 2.01
1823 1992 4.081697 TCAAGATCACACCTCAATCGCTAA 60.082 41.667 0.00 0.00 0.00 3.09
1858 2027 2.682856 AGCATTTCGACAAACACACAGT 59.317 40.909 0.00 0.00 0.00 3.55
2051 2360 9.447157 AAAGAAAAATGGACACTTGATTTTCAA 57.553 25.926 10.33 0.00 38.55 2.69
2121 2447 5.895534 AGTACGGGGACATAGTATTTTCAGA 59.104 40.000 0.00 0.00 0.00 3.27
2131 2458 2.758979 AGAACACAGTACGGGGACATAG 59.241 50.000 1.03 0.00 0.00 2.23
2137 2464 1.343465 ACTGAAGAACACAGTACGGGG 59.657 52.381 0.00 0.00 45.10 5.73
2191 2519 7.406031 ACAGCATCAAAGATTTTCAGATCAT 57.594 32.000 0.00 0.00 0.00 2.45
2228 2626 7.595875 TGCAATTCACATCAACAACTGATAAAG 59.404 33.333 0.00 0.00 43.28 1.85
2239 2638 8.283992 TGAATTCATTTTGCAATTCACATCAAC 58.716 29.630 3.38 0.00 41.80 3.18
2240 2639 8.379457 TGAATTCATTTTGCAATTCACATCAA 57.621 26.923 3.38 0.00 41.80 2.57
2310 2719 6.148948 TCAAACATAAGCAAGAAACGGAATG 58.851 36.000 0.00 0.00 0.00 2.67
2311 2720 6.325919 TCAAACATAAGCAAGAAACGGAAT 57.674 33.333 0.00 0.00 0.00 3.01
2316 2725 6.865205 AGAAGCATCAAACATAAGCAAGAAAC 59.135 34.615 0.00 0.00 0.00 2.78
2371 2781 4.380678 CAGCATTTCAACAAAGATCACACG 59.619 41.667 0.00 0.00 0.00 4.49
2379 2877 6.847956 TTTCATTCCAGCATTTCAACAAAG 57.152 33.333 0.00 0.00 0.00 2.77
2430 2928 7.301868 TCAGCTTTTTGTAGGGATTTGATTT 57.698 32.000 0.00 0.00 0.00 2.17
2450 2948 6.842163 TGAGAAAATTTTAGGTTCGATCAGC 58.158 36.000 2.75 0.00 0.00 4.26
2468 2970 8.165239 ACACACAGCAACTATTATTTGAGAAA 57.835 30.769 0.00 0.00 0.00 2.52
2470 2972 7.443879 TGAACACACAGCAACTATTATTTGAGA 59.556 33.333 0.00 0.00 0.00 3.27
2473 2975 7.216881 CGATGAACACACAGCAACTATTATTTG 59.783 37.037 0.00 0.00 0.00 2.32
2516 3089 9.911788 AGATATAGAAAGAAACATGGACATTGT 57.088 29.630 0.00 0.00 0.00 2.71
2551 3124 2.571653 TGACCAGACAATACTTCAGGGG 59.428 50.000 0.00 0.00 0.00 4.79
2556 3129 4.003648 CAGGGTTGACCAGACAATACTTC 58.996 47.826 2.12 0.00 43.89 3.01
2569 3142 6.373495 ACGGAGTATTATTTTTCAGGGTTGAC 59.627 38.462 0.00 0.00 41.94 3.18
2588 3161 9.282569 CTTAGTACAGGAAGTATTATACGGAGT 57.717 37.037 0.00 0.00 38.93 3.85
2589 3162 9.499479 TCTTAGTACAGGAAGTATTATACGGAG 57.501 37.037 0.00 0.00 34.67 4.63
2598 3171 9.482175 ACTTTCAGATCTTAGTACAGGAAGTAT 57.518 33.333 0.00 0.00 34.67 2.12
2601 3174 7.607250 ACACTTTCAGATCTTAGTACAGGAAG 58.393 38.462 0.00 0.00 0.00 3.46
2660 3234 0.842467 AGGCAAGCTAGGGGTTCAGT 60.842 55.000 0.00 0.00 0.00 3.41
2662 3236 1.768870 GATAGGCAAGCTAGGGGTTCA 59.231 52.381 0.00 0.00 0.00 3.18
2663 3237 1.270358 CGATAGGCAAGCTAGGGGTTC 60.270 57.143 0.00 0.00 0.00 3.62
2679 3253 0.818445 GTGGCGAGAGAGACCCGATA 60.818 60.000 0.00 0.00 0.00 2.92
2680 3254 2.122167 GTGGCGAGAGAGACCCGAT 61.122 63.158 0.00 0.00 0.00 4.18
2681 3255 2.750637 GTGGCGAGAGAGACCCGA 60.751 66.667 0.00 0.00 0.00 5.14
2688 3262 0.687427 TGATGATGGGTGGCGAGAGA 60.687 55.000 0.00 0.00 0.00 3.10
2694 3268 1.152881 GGAGGTGATGATGGGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
2699 3273 0.031314 CGACGAGGAGGTGATGATGG 59.969 60.000 0.00 0.00 0.00 3.51
2700 3274 0.741326 ACGACGAGGAGGTGATGATG 59.259 55.000 0.00 0.00 0.00 3.07
2701 3275 1.135139 CAACGACGAGGAGGTGATGAT 59.865 52.381 0.00 0.00 0.00 2.45
2702 3276 0.526211 CAACGACGAGGAGGTGATGA 59.474 55.000 0.00 0.00 0.00 2.92
2703 3277 0.243907 ACAACGACGAGGAGGTGATG 59.756 55.000 0.00 0.00 0.00 3.07
2704 3278 0.526662 GACAACGACGAGGAGGTGAT 59.473 55.000 0.00 0.00 0.00 3.06
2705 3279 1.848932 CGACAACGACGAGGAGGTGA 61.849 60.000 0.00 0.00 42.66 4.02
2706 3280 1.442184 CGACAACGACGAGGAGGTG 60.442 63.158 0.00 0.00 42.66 4.00
2707 3281 2.623915 CCGACAACGACGAGGAGGT 61.624 63.158 0.00 0.00 42.66 3.85
2708 3282 2.178521 CCGACAACGACGAGGAGG 59.821 66.667 0.00 0.00 42.66 4.30
2709 3283 1.134901 CTCCGACAACGACGAGGAG 59.865 63.158 0.00 7.66 41.91 3.69
2710 3284 2.330372 CCTCCGACAACGACGAGGA 61.330 63.158 0.00 1.43 44.64 3.71
2711 3285 2.178521 CCTCCGACAACGACGAGG 59.821 66.667 0.00 0.00 39.87 4.63
2712 3286 2.504244 GCCTCCGACAACGACGAG 60.504 66.667 0.00 0.00 42.66 4.18
2713 3287 4.047059 GGCCTCCGACAACGACGA 62.047 66.667 0.00 0.00 42.66 4.20
2714 3288 3.569049 AAGGCCTCCGACAACGACG 62.569 63.158 5.23 0.00 42.66 5.12
2715 3289 1.737008 GAAGGCCTCCGACAACGAC 60.737 63.158 5.23 0.00 42.66 4.34
2716 3290 2.654877 GAAGGCCTCCGACAACGA 59.345 61.111 5.23 0.00 42.66 3.85
2717 3291 2.809601 CGAAGGCCTCCGACAACG 60.810 66.667 5.07 0.00 39.43 4.10
2718 3292 2.434359 CCGAAGGCCTCCGACAAC 60.434 66.667 15.29 0.00 46.14 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.