Multiple sequence alignment - TraesCS7D01G041600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G041600 chr7D 100.000 4754 0 0 1 4754 20946170 20950923 0.000000e+00 8780
1 TraesCS7D01G041600 chr7D 85.219 2855 401 14 883 3726 89533135 89530291 0.000000e+00 2915
2 TraesCS7D01G041600 chr7D 84.607 2891 426 14 910 3790 555196459 555193578 0.000000e+00 2856
3 TraesCS7D01G041600 chr7D 85.290 2760 392 9 972 3724 20404299 20407051 0.000000e+00 2835
4 TraesCS7D01G041600 chr7A 95.533 2149 76 4 472 2612 21241385 21243521 0.000000e+00 3419
5 TraesCS7D01G041600 chr7A 83.896 2993 456 14 808 3790 20659489 20662465 0.000000e+00 2833
6 TraesCS7D01G041600 chr7A 84.105 2894 441 16 907 3790 640662279 640665163 0.000000e+00 2778
7 TraesCS7D01G041600 chr7A 92.580 1523 81 11 2772 4264 21253281 21254801 0.000000e+00 2158
8 TraesCS7D01G041600 chr7A 93.634 487 28 3 1 484 21238952 21239438 0.000000e+00 725
9 TraesCS7D01G041600 chr2A 85.759 2879 390 16 893 3761 733087694 733090562 0.000000e+00 3027
10 TraesCS7D01G041600 chr2D 85.586 2886 400 12 904 3780 598814002 598816880 0.000000e+00 3011
11 TraesCS7D01G041600 chr2B 85.324 2889 400 19 904 3780 727685960 727688836 0.000000e+00 2964
12 TraesCS7D01G041600 chr7B 84.511 2886 425 17 907 3781 601114396 601117270 0.000000e+00 2833
13 TraesCS7D01G041600 chr1D 86.170 94 12 1 4229 4321 445007031 445006938 3.030000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G041600 chr7D 20946170 20950923 4753 False 8780 8780 100.0000 1 4754 1 chr7D.!!$F2 4753
1 TraesCS7D01G041600 chr7D 89530291 89533135 2844 True 2915 2915 85.2190 883 3726 1 chr7D.!!$R1 2843
2 TraesCS7D01G041600 chr7D 555193578 555196459 2881 True 2856 2856 84.6070 910 3790 1 chr7D.!!$R2 2880
3 TraesCS7D01G041600 chr7D 20404299 20407051 2752 False 2835 2835 85.2900 972 3724 1 chr7D.!!$F1 2752
4 TraesCS7D01G041600 chr7A 20659489 20662465 2976 False 2833 2833 83.8960 808 3790 1 chr7A.!!$F1 2982
5 TraesCS7D01G041600 chr7A 640662279 640665163 2884 False 2778 2778 84.1050 907 3790 1 chr7A.!!$F3 2883
6 TraesCS7D01G041600 chr7A 21253281 21254801 1520 False 2158 2158 92.5800 2772 4264 1 chr7A.!!$F2 1492
7 TraesCS7D01G041600 chr7A 21238952 21243521 4569 False 2072 3419 94.5835 1 2612 2 chr7A.!!$F4 2611
8 TraesCS7D01G041600 chr2A 733087694 733090562 2868 False 3027 3027 85.7590 893 3761 1 chr2A.!!$F1 2868
9 TraesCS7D01G041600 chr2D 598814002 598816880 2878 False 3011 3011 85.5860 904 3780 1 chr2D.!!$F1 2876
10 TraesCS7D01G041600 chr2B 727685960 727688836 2876 False 2964 2964 85.3240 904 3780 1 chr2B.!!$F1 2876
11 TraesCS7D01G041600 chr7B 601114396 601117270 2874 False 2833 2833 84.5110 907 3781 1 chr7B.!!$F1 2874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 381 0.104855 TATTGGCGAGCTAGCTGGTG 59.895 55.000 24.99 12.84 37.29 4.17 F
1417 3389 1.202651 ACCTTTCACACTTGTCCGAGG 60.203 52.381 0.00 0.00 0.00 4.63 F
2625 4602 0.459585 CGGATGGACGTCGATTGGTT 60.460 55.000 14.57 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2080 4056 3.648067 TCAGACCAAGACTTCAACTCCAT 59.352 43.478 0.00 0.0 0.00 3.41 R
3330 5307 0.392729 CAGCAGCTTGGAAGAGAGGG 60.393 60.000 0.00 0.0 0.00 4.30 R
4429 6438 0.032130 ACGCGCTGATCGATACCATT 59.968 50.000 5.73 0.0 41.67 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.365021 AAGGATTCAGGATCTTCACGATT 57.635 39.130 0.00 0.00 35.02 3.34
40 41 4.447724 TCACGATTAAGCTTCAGTGACAAC 59.552 41.667 16.84 0.00 34.24 3.32
62 63 0.807496 GACCAGCCAAGCATCAAGTC 59.193 55.000 0.00 0.00 0.00 3.01
63 64 0.403271 ACCAGCCAAGCATCAAGTCT 59.597 50.000 0.00 0.00 0.00 3.24
73 74 5.380651 CAAGCATCAAGTCTCTTCTTTTCG 58.619 41.667 0.00 0.00 0.00 3.46
74 75 4.636249 AGCATCAAGTCTCTTCTTTTCGT 58.364 39.130 0.00 0.00 0.00 3.85
80 81 4.999751 AGTCTCTTCTTTTCGTGATTGC 57.000 40.909 0.00 0.00 0.00 3.56
86 87 3.878086 TCTTTTCGTGATTGCTGTGAC 57.122 42.857 0.00 0.00 0.00 3.67
108 109 2.226437 GGTTTCAGATTCAGAAGCGCAA 59.774 45.455 11.47 0.00 0.00 4.85
119 120 1.607148 AGAAGCGCAAAAGGTGGTTAC 59.393 47.619 11.47 0.00 46.85 2.50
147 148 1.844687 ACCTGGGTCTAACCTACGAC 58.155 55.000 0.00 0.00 38.64 4.34
148 149 1.076024 ACCTGGGTCTAACCTACGACA 59.924 52.381 0.00 0.00 38.64 4.35
158 159 0.320697 ACCTACGACAAGGAAGGTGC 59.679 55.000 9.64 0.00 38.45 5.01
164 165 1.021968 GACAAGGAAGGTGCGTTGTT 58.978 50.000 0.00 0.00 44.16 2.83
191 192 7.504926 TCCCTAGTTTTCTGGCTATCTTAAA 57.495 36.000 0.00 0.00 0.00 1.52
262 263 5.772825 TGTTTCTTGCAGCTATTTGTTCT 57.227 34.783 0.00 0.00 0.00 3.01
263 264 5.762045 TGTTTCTTGCAGCTATTTGTTCTC 58.238 37.500 0.00 0.00 0.00 2.87
264 265 5.157067 GTTTCTTGCAGCTATTTGTTCTCC 58.843 41.667 0.00 0.00 0.00 3.71
265 266 4.019792 TCTTGCAGCTATTTGTTCTCCA 57.980 40.909 0.00 0.00 0.00 3.86
266 267 4.592942 TCTTGCAGCTATTTGTTCTCCAT 58.407 39.130 0.00 0.00 0.00 3.41
267 268 4.397103 TCTTGCAGCTATTTGTTCTCCATG 59.603 41.667 0.00 0.00 0.00 3.66
304 307 8.698973 TTAGATAGACAGTGAGGAAATAGAGG 57.301 38.462 0.00 0.00 0.00 3.69
315 318 7.894364 AGTGAGGAAATAGAGGACTAAGTTACA 59.106 37.037 0.00 0.00 32.04 2.41
318 321 8.611051 AGGAAATAGAGGACTAAGTTACATGT 57.389 34.615 2.69 2.69 32.04 3.21
354 357 6.360370 AGTGAACTATCCAAAAGCAGAGTA 57.640 37.500 0.00 0.00 0.00 2.59
378 381 0.104855 TATTGGCGAGCTAGCTGGTG 59.895 55.000 24.99 12.84 37.29 4.17
472 476 1.630878 AGGTCATTTCCCTGTCACTCC 59.369 52.381 0.00 0.00 0.00 3.85
526 2497 3.694566 CAGTTGACTACTTATTTGGGGGC 59.305 47.826 0.00 0.00 33.85 5.80
550 2521 8.754080 GGCCTTTTAAGCTGAGATATCTCTATA 58.246 37.037 28.51 15.41 43.25 1.31
668 2639 5.113446 AGTGCTTCAGAATTCTCATGGAT 57.887 39.130 4.57 0.00 0.00 3.41
785 2756 5.359576 GGCATTGTGGTTTATGAGGATTACA 59.640 40.000 0.00 0.00 0.00 2.41
843 2814 9.528018 TGTGGTTTGAGATTTTTGAAGTATTTC 57.472 29.630 0.00 0.00 0.00 2.17
966 2937 4.585955 AATATACAGCTAGACCACCACG 57.414 45.455 0.00 0.00 0.00 4.94
1346 3318 2.049372 AGGGTGCAAAAAGCCAAGATT 58.951 42.857 0.00 0.00 44.83 2.40
1417 3389 1.202651 ACCTTTCACACTTGTCCGAGG 60.203 52.381 0.00 0.00 0.00 4.63
1573 3548 4.843728 AGAAAGACTTGAACAGTGGTTGA 58.156 39.130 0.00 0.00 37.36 3.18
1582 3557 3.389656 TGAACAGTGGTTGACAGGTGATA 59.610 43.478 0.00 0.00 37.36 2.15
1793 3768 5.181811 CCAACATTCTATCAAACACTGCAGA 59.818 40.000 23.35 0.00 0.00 4.26
1929 3904 7.018550 AGGGTGCTTATTCATAATGATAAGGGA 59.981 37.037 10.24 0.00 0.00 4.20
2049 4024 5.880901 TGGGATCTCTTTTGTAAGAAAGCT 58.119 37.500 0.00 0.00 39.80 3.74
2080 4056 6.903516 AGAGATACAAATCATGAATGTCCCA 58.096 36.000 17.77 5.02 34.28 4.37
2606 4583 1.056660 TGTGGGGGTTCTCTTGAGAC 58.943 55.000 0.00 0.00 0.00 3.36
2625 4602 0.459585 CGGATGGACGTCGATTGGTT 60.460 55.000 14.57 0.00 0.00 3.67
2640 4617 7.027161 GTCGATTGGTTATGCACAAACTAAAT 58.973 34.615 14.02 12.63 32.15 1.40
2647 4624 8.465999 TGGTTATGCACAAACTAAATAAGGATG 58.534 33.333 12.18 0.00 0.00 3.51
2655 4632 8.081633 CACAAACTAAATAAGGATGTTCAGCAA 58.918 33.333 0.00 0.00 0.00 3.91
2658 4635 7.573968 ACTAAATAAGGATGTTCAGCAATCC 57.426 36.000 0.00 0.00 0.00 3.01
2713 4690 2.093973 ACACTGGACAGTAGCATGCTAC 60.094 50.000 39.13 39.13 46.70 3.58
2754 4731 7.278461 TCTGCTATGTAAGGAGTCAAGATAC 57.722 40.000 0.00 0.00 43.80 2.24
2783 4760 8.874744 ACAGTACTAGAATTAAGTGGTCTACA 57.125 34.615 0.00 0.00 0.00 2.74
2928 4905 6.549736 TGGACCTTTCTCGATCTGATATACAA 59.450 38.462 0.00 0.00 0.00 2.41
3317 5294 2.036890 ACGACTAGCGGAAGGGGT 59.963 61.111 10.53 0.00 46.49 4.95
3330 5307 1.134438 AAGGGGTGTTGGAGGAGTCC 61.134 60.000 0.00 0.00 44.24 3.85
3423 5400 0.813210 CCCTGCCATCTCTTTCTCGC 60.813 60.000 0.00 0.00 0.00 5.03
3426 5403 0.615331 TGCCATCTCTTTCTCGCCTT 59.385 50.000 0.00 0.00 0.00 4.35
3464 5441 9.717942 ATTTCTAGATTTCACCAGAGCATATAC 57.282 33.333 0.00 0.00 0.00 1.47
3474 5451 2.495270 CAGAGCATATACCGGAGAGCAT 59.505 50.000 9.46 0.00 0.00 3.79
3572 5549 2.897271 ATACAACAAGGTGCCATGGA 57.103 45.000 18.40 0.00 0.00 3.41
3579 5556 0.178924 AAGGTGCCATGGAAAGCCTT 60.179 50.000 18.40 18.14 34.31 4.35
3663 5640 0.613853 TGCCCCTACAGCGTCTAGTT 60.614 55.000 0.00 0.00 0.00 2.24
3666 5643 2.614734 GCCCCTACAGCGTCTAGTTTTT 60.615 50.000 0.00 0.00 0.00 1.94
3747 5725 0.833287 AATGGCAGCATACTCTCCGT 59.167 50.000 0.00 0.00 0.00 4.69
3887 5895 2.157738 CACCTGCTGGAAGGAAGAAAG 58.842 52.381 17.64 0.00 40.02 2.62
3896 5904 4.990526 TGGAAGGAAGAAAGAAGCTTCAT 58.009 39.130 27.57 14.17 42.68 2.57
3978 5986 1.871039 TGTTTCAAGAAGCACTACGGC 59.129 47.619 0.00 0.00 0.00 5.68
4005 6013 0.543749 GCTGCTACTTCCACCTCCAT 59.456 55.000 0.00 0.00 0.00 3.41
4012 6020 3.983044 ACTTCCACCTCCATCTACAAC 57.017 47.619 0.00 0.00 0.00 3.32
4013 6021 3.521727 ACTTCCACCTCCATCTACAACT 58.478 45.455 0.00 0.00 0.00 3.16
4016 6024 1.407437 CCACCTCCATCTACAACTGCC 60.407 57.143 0.00 0.00 0.00 4.85
4017 6025 0.912486 ACCTCCATCTACAACTGCCC 59.088 55.000 0.00 0.00 0.00 5.36
4026 6034 1.137872 CTACAACTGCCCTCCTGCTAG 59.862 57.143 0.00 0.00 0.00 3.42
4031 6039 3.330126 ACTGCCCTCCTGCTAGTATTA 57.670 47.619 0.00 0.00 0.00 0.98
4032 6040 3.863086 ACTGCCCTCCTGCTAGTATTAT 58.137 45.455 0.00 0.00 0.00 1.28
4039 6047 4.757149 CCTCCTGCTAGTATTATTGTTGGC 59.243 45.833 0.00 0.00 0.00 4.52
4130 6138 0.674534 ACTGAGACTGGGTCGTGTTC 59.325 55.000 0.00 0.00 37.67 3.18
4141 6149 3.767131 TGGGTCGTGTTCTCATATTCAGA 59.233 43.478 0.00 0.00 0.00 3.27
4144 6152 6.097696 TGGGTCGTGTTCTCATATTCAGAATA 59.902 38.462 5.29 5.29 32.50 1.75
4195 6203 4.116961 TGTGTGTGCTAGTTGTGAACTAC 58.883 43.478 0.00 0.00 42.81 2.73
4202 6210 3.119065 GCTAGTTGTGAACTACTCCCTCC 60.119 52.174 0.76 0.00 42.81 4.30
4210 6218 1.546961 ACTACTCCCTCCGTTCACAG 58.453 55.000 0.00 0.00 0.00 3.66
4213 6221 1.187087 ACTCCCTCCGTTCACAGATC 58.813 55.000 0.00 0.00 0.00 2.75
4214 6222 1.186200 CTCCCTCCGTTCACAGATCA 58.814 55.000 0.00 0.00 0.00 2.92
4227 6235 9.080915 CCGTTCACAGATCAGATGTATATATTG 57.919 37.037 0.00 0.00 0.00 1.90
4238 6246 9.893305 TCAGATGTATATATTGTAGACACGTTG 57.107 33.333 0.00 0.00 0.00 4.10
4254 6263 3.716918 CACGTTGTATGTGTTTGTTCACG 59.283 43.478 0.00 0.00 40.74 4.35
4264 6273 3.482110 GTGTTTGTTCACGCATTTCAGTC 59.518 43.478 0.00 0.00 0.00 3.51
4265 6274 3.376859 TGTTTGTTCACGCATTTCAGTCT 59.623 39.130 0.00 0.00 0.00 3.24
4266 6275 3.607422 TTGTTCACGCATTTCAGTCTG 57.393 42.857 0.00 0.00 0.00 3.51
4267 6276 2.560504 TGTTCACGCATTTCAGTCTGT 58.439 42.857 0.00 0.00 0.00 3.41
4268 6277 3.723260 TGTTCACGCATTTCAGTCTGTA 58.277 40.909 0.00 0.00 0.00 2.74
4269 6278 4.314961 TGTTCACGCATTTCAGTCTGTAT 58.685 39.130 0.00 0.00 0.00 2.29
4270 6279 4.152223 TGTTCACGCATTTCAGTCTGTATG 59.848 41.667 0.00 6.55 0.00 2.39
4271 6280 2.672874 TCACGCATTTCAGTCTGTATGC 59.327 45.455 22.10 22.10 39.88 3.14
4272 6281 2.416202 CACGCATTTCAGTCTGTATGCA 59.584 45.455 26.89 0.00 42.61 3.96
4273 6282 2.674852 ACGCATTTCAGTCTGTATGCAG 59.325 45.455 26.89 22.89 42.61 4.41
4274 6283 2.674852 CGCATTTCAGTCTGTATGCAGT 59.325 45.455 26.89 0.00 42.61 4.40
4275 6284 3.242220 CGCATTTCAGTCTGTATGCAGTC 60.242 47.826 26.89 5.31 42.61 3.51
4276 6285 3.937706 GCATTTCAGTCTGTATGCAGTCT 59.062 43.478 24.78 7.71 42.18 3.24
4277 6286 5.111989 GCATTTCAGTCTGTATGCAGTCTA 58.888 41.667 24.78 0.00 42.18 2.59
4278 6287 5.006165 GCATTTCAGTCTGTATGCAGTCTAC 59.994 44.000 24.78 2.00 42.18 2.59
4279 6288 5.722021 TTTCAGTCTGTATGCAGTCTACA 57.278 39.130 10.80 0.00 43.05 2.74
4280 6289 5.921962 TTCAGTCTGTATGCAGTCTACAT 57.078 39.130 10.80 0.00 43.05 2.29
4281 6290 5.921962 TCAGTCTGTATGCAGTCTACATT 57.078 39.130 10.80 0.00 43.05 2.71
4282 6291 5.654497 TCAGTCTGTATGCAGTCTACATTG 58.346 41.667 10.80 0.00 43.05 2.82
4283 6292 5.418840 TCAGTCTGTATGCAGTCTACATTGA 59.581 40.000 10.80 1.14 43.05 2.57
4284 6293 6.071391 TCAGTCTGTATGCAGTCTACATTGAA 60.071 38.462 10.80 0.00 43.05 2.69
4285 6294 6.591448 CAGTCTGTATGCAGTCTACATTGAAA 59.409 38.462 10.80 0.00 43.05 2.69
4286 6295 7.279536 CAGTCTGTATGCAGTCTACATTGAAAT 59.720 37.037 10.80 0.00 43.05 2.17
4287 6296 8.478066 AGTCTGTATGCAGTCTACATTGAAATA 58.522 33.333 10.80 0.00 43.05 1.40
4288 6297 8.543774 GTCTGTATGCAGTCTACATTGAAATAC 58.456 37.037 10.80 0.00 43.05 1.89
4289 6298 7.710907 TCTGTATGCAGTCTACATTGAAATACC 59.289 37.037 10.80 0.00 43.05 2.73
4290 6299 6.765989 TGTATGCAGTCTACATTGAAATACCC 59.234 38.462 0.00 0.00 0.00 3.69
4291 6300 5.172687 TGCAGTCTACATTGAAATACCCA 57.827 39.130 0.00 0.00 0.00 4.51
4292 6301 5.565509 TGCAGTCTACATTGAAATACCCAA 58.434 37.500 0.00 0.00 0.00 4.12
4293 6302 6.007076 TGCAGTCTACATTGAAATACCCAAA 58.993 36.000 0.00 0.00 0.00 3.28
4294 6303 6.491745 TGCAGTCTACATTGAAATACCCAAAA 59.508 34.615 0.00 0.00 0.00 2.44
4295 6304 6.806739 GCAGTCTACATTGAAATACCCAAAAC 59.193 38.462 0.00 0.00 0.00 2.43
4296 6305 7.523052 GCAGTCTACATTGAAATACCCAAAACA 60.523 37.037 0.00 0.00 0.00 2.83
4297 6306 8.522830 CAGTCTACATTGAAATACCCAAAACAT 58.477 33.333 0.00 0.00 0.00 2.71
4298 6307 8.739972 AGTCTACATTGAAATACCCAAAACATC 58.260 33.333 0.00 0.00 0.00 3.06
4299 6308 8.519526 GTCTACATTGAAATACCCAAAACATCA 58.480 33.333 0.00 0.00 0.00 3.07
4300 6309 9.253832 TCTACATTGAAATACCCAAAACATCAT 57.746 29.630 0.00 0.00 0.00 2.45
4313 6322 9.796120 ACCCAAAACATCATATATTTGTAAACG 57.204 29.630 0.00 0.00 32.29 3.60
4314 6323 9.243637 CCCAAAACATCATATATTTGTAAACGG 57.756 33.333 0.00 0.00 32.29 4.44
4318 6327 7.979444 ACATCATATATTTGTAAACGGAGGG 57.021 36.000 0.00 0.00 0.00 4.30
4319 6328 7.741785 ACATCATATATTTGTAAACGGAGGGA 58.258 34.615 0.00 0.00 0.00 4.20
4320 6329 7.878127 ACATCATATATTTGTAAACGGAGGGAG 59.122 37.037 0.00 0.00 0.00 4.30
4321 6330 6.228258 TCATATATTTGTAAACGGAGGGAGC 58.772 40.000 0.00 0.00 0.00 4.70
4322 6331 2.871096 ATTTGTAAACGGAGGGAGCA 57.129 45.000 0.00 0.00 0.00 4.26
4323 6332 2.871096 TTTGTAAACGGAGGGAGCAT 57.129 45.000 0.00 0.00 0.00 3.79
4324 6333 2.396590 TTGTAAACGGAGGGAGCATC 57.603 50.000 0.00 0.00 0.00 3.91
4325 6334 1.568504 TGTAAACGGAGGGAGCATCT 58.431 50.000 0.00 0.00 33.73 2.90
4326 6335 2.742348 TGTAAACGGAGGGAGCATCTA 58.258 47.619 0.00 0.00 33.73 1.98
4327 6336 3.305720 TGTAAACGGAGGGAGCATCTAT 58.694 45.455 0.00 0.00 33.73 1.98
4328 6337 2.918712 AAACGGAGGGAGCATCTATG 57.081 50.000 0.00 0.00 33.73 2.23
4329 6338 1.794714 AACGGAGGGAGCATCTATGT 58.205 50.000 0.00 0.00 33.73 2.29
4330 6339 1.794714 ACGGAGGGAGCATCTATGTT 58.205 50.000 0.00 0.00 33.73 2.71
4331 6340 1.414181 ACGGAGGGAGCATCTATGTTG 59.586 52.381 0.00 0.00 33.73 3.33
4332 6341 1.414181 CGGAGGGAGCATCTATGTTGT 59.586 52.381 0.00 0.00 33.73 3.32
4333 6342 2.546795 CGGAGGGAGCATCTATGTTGTC 60.547 54.545 0.00 0.00 33.73 3.18
4334 6343 2.546795 GGAGGGAGCATCTATGTTGTCG 60.547 54.545 0.00 0.00 33.73 4.35
4335 6344 1.202580 AGGGAGCATCTATGTTGTCGC 60.203 52.381 0.00 0.00 33.73 5.19
4336 6345 1.221414 GGAGCATCTATGTTGTCGCC 58.779 55.000 0.00 0.00 33.73 5.54
4337 6346 1.202580 GGAGCATCTATGTTGTCGCCT 60.203 52.381 0.00 0.00 33.73 5.52
4338 6347 2.035961 GGAGCATCTATGTTGTCGCCTA 59.964 50.000 0.00 0.00 33.73 3.93
4339 6348 3.306364 GGAGCATCTATGTTGTCGCCTAT 60.306 47.826 0.00 0.00 33.73 2.57
4340 6349 4.310769 GAGCATCTATGTTGTCGCCTATT 58.689 43.478 0.00 0.00 0.00 1.73
4341 6350 4.708177 AGCATCTATGTTGTCGCCTATTT 58.292 39.130 0.00 0.00 0.00 1.40
4342 6351 4.752101 AGCATCTATGTTGTCGCCTATTTC 59.248 41.667 0.00 0.00 0.00 2.17
4343 6352 4.511454 GCATCTATGTTGTCGCCTATTTCA 59.489 41.667 0.00 0.00 0.00 2.69
4344 6353 5.333645 GCATCTATGTTGTCGCCTATTTCAG 60.334 44.000 0.00 0.00 0.00 3.02
4345 6354 5.339008 TCTATGTTGTCGCCTATTTCAGT 57.661 39.130 0.00 0.00 0.00 3.41
4346 6355 5.730550 TCTATGTTGTCGCCTATTTCAGTT 58.269 37.500 0.00 0.00 0.00 3.16
4347 6356 4.946784 ATGTTGTCGCCTATTTCAGTTC 57.053 40.909 0.00 0.00 0.00 3.01
4348 6357 4.002906 TGTTGTCGCCTATTTCAGTTCT 57.997 40.909 0.00 0.00 0.00 3.01
4349 6358 3.745975 TGTTGTCGCCTATTTCAGTTCTG 59.254 43.478 0.00 0.00 0.00 3.02
4350 6359 2.972625 TGTCGCCTATTTCAGTTCTGG 58.027 47.619 0.00 0.00 0.00 3.86
4351 6360 1.666189 GTCGCCTATTTCAGTTCTGGC 59.334 52.381 0.00 0.00 37.24 4.85
4352 6361 1.555075 TCGCCTATTTCAGTTCTGGCT 59.445 47.619 0.00 0.00 38.33 4.75
4353 6362 1.667724 CGCCTATTTCAGTTCTGGCTG 59.332 52.381 0.00 0.00 38.33 4.85
4354 6363 2.716217 GCCTATTTCAGTTCTGGCTGT 58.284 47.619 0.00 0.00 37.70 4.40
4355 6364 3.084786 GCCTATTTCAGTTCTGGCTGTT 58.915 45.455 0.00 0.00 37.70 3.16
4356 6365 4.261801 GCCTATTTCAGTTCTGGCTGTTA 58.738 43.478 0.00 0.00 37.70 2.41
4357 6366 4.700213 GCCTATTTCAGTTCTGGCTGTTAA 59.300 41.667 0.00 0.00 37.70 2.01
4358 6367 5.183140 GCCTATTTCAGTTCTGGCTGTTAAA 59.817 40.000 0.00 0.00 37.70 1.52
4359 6368 6.127619 GCCTATTTCAGTTCTGGCTGTTAAAT 60.128 38.462 0.00 1.34 37.70 1.40
4360 6369 7.067008 GCCTATTTCAGTTCTGGCTGTTAAATA 59.933 37.037 0.00 2.29 37.70 1.40
4361 6370 8.398665 CCTATTTCAGTTCTGGCTGTTAAATAC 58.601 37.037 0.00 0.00 37.70 1.89
4362 6371 9.167311 CTATTTCAGTTCTGGCTGTTAAATACT 57.833 33.333 0.00 0.00 37.70 2.12
4364 6373 7.900782 TTCAGTTCTGGCTGTTAAATACTAC 57.099 36.000 0.00 0.00 37.70 2.73
4365 6374 7.241042 TCAGTTCTGGCTGTTAAATACTACT 57.759 36.000 0.00 0.00 37.70 2.57
4366 6375 7.321153 TCAGTTCTGGCTGTTAAATACTACTC 58.679 38.462 0.00 0.00 37.70 2.59
4367 6376 6.253727 CAGTTCTGGCTGTTAAATACTACTCG 59.746 42.308 0.00 0.00 0.00 4.18
4368 6377 5.909621 TCTGGCTGTTAAATACTACTCGT 57.090 39.130 0.00 0.00 0.00 4.18
4369 6378 5.647589 TCTGGCTGTTAAATACTACTCGTG 58.352 41.667 0.00 0.00 0.00 4.35
4370 6379 5.184479 TCTGGCTGTTAAATACTACTCGTGT 59.816 40.000 0.00 0.00 0.00 4.49
4371 6380 5.786311 TGGCTGTTAAATACTACTCGTGTT 58.214 37.500 0.00 0.00 0.00 3.32
4372 6381 5.636121 TGGCTGTTAAATACTACTCGTGTTG 59.364 40.000 0.00 0.00 0.00 3.33
4373 6382 5.636543 GGCTGTTAAATACTACTCGTGTTGT 59.363 40.000 9.48 9.48 36.27 3.32
4374 6383 6.400727 GGCTGTTAAATACTACTCGTGTTGTG 60.401 42.308 13.63 0.37 34.32 3.33
4375 6384 6.364165 GCTGTTAAATACTACTCGTGTTGTGA 59.636 38.462 13.63 0.93 34.32 3.58
4376 6385 7.063074 GCTGTTAAATACTACTCGTGTTGTGAT 59.937 37.037 13.63 1.48 34.32 3.06
4377 6386 8.821147 TGTTAAATACTACTCGTGTTGTGATT 57.179 30.769 13.63 10.63 34.32 2.57
4378 6387 8.918658 TGTTAAATACTACTCGTGTTGTGATTC 58.081 33.333 13.63 2.56 34.32 2.52
4379 6388 8.918658 GTTAAATACTACTCGTGTTGTGATTCA 58.081 33.333 13.63 0.00 34.32 2.57
4380 6389 9.647797 TTAAATACTACTCGTGTTGTGATTCAT 57.352 29.630 13.63 0.00 34.32 2.57
4382 6391 9.647797 AAATACTACTCGTGTTGTGATTCATAA 57.352 29.630 13.63 0.00 34.32 1.90
4383 6392 9.817809 AATACTACTCGTGTTGTGATTCATAAT 57.182 29.630 13.63 0.00 34.32 1.28
4384 6393 7.525688 ACTACTCGTGTTGTGATTCATAATG 57.474 36.000 3.97 0.00 31.42 1.90
4385 6394 7.320399 ACTACTCGTGTTGTGATTCATAATGA 58.680 34.615 3.97 0.00 31.42 2.57
4386 6395 6.408858 ACTCGTGTTGTGATTCATAATGAC 57.591 37.500 0.00 0.03 0.00 3.06
4387 6396 5.931724 ACTCGTGTTGTGATTCATAATGACA 59.068 36.000 0.00 0.00 33.12 3.58
4388 6397 6.091305 ACTCGTGTTGTGATTCATAATGACAG 59.909 38.462 0.00 3.92 36.39 3.51
4389 6398 6.162777 TCGTGTTGTGATTCATAATGACAGA 58.837 36.000 0.00 1.11 36.39 3.41
4390 6399 6.818142 TCGTGTTGTGATTCATAATGACAGAT 59.182 34.615 0.00 0.00 36.39 2.90
4391 6400 7.978975 TCGTGTTGTGATTCATAATGACAGATA 59.021 33.333 0.00 0.00 36.39 1.98
4392 6401 8.768019 CGTGTTGTGATTCATAATGACAGATAT 58.232 33.333 0.00 0.00 36.39 1.63
4417 6426 7.833285 TTATTTCCTTTTAACAGAGTTGGCT 57.167 32.000 0.00 0.00 0.00 4.75
4418 6427 6.731292 ATTTCCTTTTAACAGAGTTGGCTT 57.269 33.333 0.00 0.00 0.00 4.35
4419 6428 5.514274 TTCCTTTTAACAGAGTTGGCTTG 57.486 39.130 0.00 0.00 0.00 4.01
4420 6429 4.532834 TCCTTTTAACAGAGTTGGCTTGT 58.467 39.130 0.00 0.00 0.00 3.16
4421 6430 4.338118 TCCTTTTAACAGAGTTGGCTTGTG 59.662 41.667 0.00 0.00 0.00 3.33
4422 6431 4.338118 CCTTTTAACAGAGTTGGCTTGTGA 59.662 41.667 0.00 0.00 0.00 3.58
4423 6432 5.010012 CCTTTTAACAGAGTTGGCTTGTGAT 59.990 40.000 0.00 0.00 0.00 3.06
4424 6433 6.461509 CCTTTTAACAGAGTTGGCTTGTGATT 60.462 38.462 0.00 0.00 0.00 2.57
4425 6434 5.689383 TTAACAGAGTTGGCTTGTGATTC 57.311 39.130 0.00 0.00 0.00 2.52
4426 6435 3.213206 ACAGAGTTGGCTTGTGATTCA 57.787 42.857 0.00 0.00 0.00 2.57
4427 6436 3.759581 ACAGAGTTGGCTTGTGATTCAT 58.240 40.909 0.00 0.00 0.00 2.57
4428 6437 4.910195 ACAGAGTTGGCTTGTGATTCATA 58.090 39.130 0.00 0.00 0.00 2.15
4429 6438 5.316167 ACAGAGTTGGCTTGTGATTCATAA 58.684 37.500 0.00 0.00 0.00 1.90
4430 6439 5.769662 ACAGAGTTGGCTTGTGATTCATAAA 59.230 36.000 0.00 0.00 0.00 1.40
4431 6440 6.435277 ACAGAGTTGGCTTGTGATTCATAAAT 59.565 34.615 0.00 0.00 0.00 1.40
4432 6441 6.750501 CAGAGTTGGCTTGTGATTCATAAATG 59.249 38.462 0.00 0.00 0.00 2.32
4433 6442 5.969423 AGTTGGCTTGTGATTCATAAATGG 58.031 37.500 0.00 0.00 0.00 3.16
4434 6443 5.481473 AGTTGGCTTGTGATTCATAAATGGT 59.519 36.000 0.00 0.00 0.00 3.55
4435 6444 6.663093 AGTTGGCTTGTGATTCATAAATGGTA 59.337 34.615 0.00 0.00 0.00 3.25
4436 6445 7.342799 AGTTGGCTTGTGATTCATAAATGGTAT 59.657 33.333 0.00 0.00 0.00 2.73
4437 6446 7.275888 TGGCTTGTGATTCATAAATGGTATC 57.724 36.000 0.00 0.00 0.00 2.24
4438 6447 6.017192 TGGCTTGTGATTCATAAATGGTATCG 60.017 38.462 0.00 0.00 0.00 2.92
4439 6448 6.204688 GGCTTGTGATTCATAAATGGTATCGA 59.795 38.462 0.00 0.00 0.00 3.59
4440 6449 7.094634 GGCTTGTGATTCATAAATGGTATCGAT 60.095 37.037 2.16 2.16 0.00 3.59
4441 6450 7.959651 GCTTGTGATTCATAAATGGTATCGATC 59.040 37.037 0.00 0.00 0.00 3.69
4442 6451 8.900983 TTGTGATTCATAAATGGTATCGATCA 57.099 30.769 0.00 0.00 0.00 2.92
4443 6452 8.538409 TGTGATTCATAAATGGTATCGATCAG 57.462 34.615 0.00 0.00 0.00 2.90
4444 6453 7.118245 TGTGATTCATAAATGGTATCGATCAGC 59.882 37.037 0.00 0.00 0.00 4.26
4445 6454 6.311200 TGATTCATAAATGGTATCGATCAGCG 59.689 38.462 0.00 0.00 42.69 5.18
4446 6455 3.926527 TCATAAATGGTATCGATCAGCGC 59.073 43.478 0.00 0.00 40.61 5.92
4447 6456 1.139989 AAATGGTATCGATCAGCGCG 58.860 50.000 0.00 0.00 40.61 6.86
4448 6457 0.032130 AATGGTATCGATCAGCGCGT 59.968 50.000 8.43 0.00 40.61 6.01
4449 6458 0.032130 ATGGTATCGATCAGCGCGTT 59.968 50.000 8.43 0.00 40.61 4.84
4450 6459 0.869880 TGGTATCGATCAGCGCGTTG 60.870 55.000 17.58 17.58 40.61 4.10
4451 6460 0.870307 GGTATCGATCAGCGCGTTGT 60.870 55.000 22.48 10.12 40.61 3.32
4452 6461 0.498927 GTATCGATCAGCGCGTTGTC 59.501 55.000 22.48 16.88 40.61 3.18
4453 6462 0.594028 TATCGATCAGCGCGTTGTCC 60.594 55.000 22.48 13.82 40.61 4.02
4454 6463 2.284798 ATCGATCAGCGCGTTGTCCT 62.285 55.000 22.48 8.83 40.61 3.85
4455 6464 2.094659 CGATCAGCGCGTTGTCCTT 61.095 57.895 22.48 6.51 0.00 3.36
4456 6465 1.421485 GATCAGCGCGTTGTCCTTG 59.579 57.895 22.48 0.00 0.00 3.61
4457 6466 1.291877 GATCAGCGCGTTGTCCTTGT 61.292 55.000 22.48 3.49 0.00 3.16
4458 6467 0.884704 ATCAGCGCGTTGTCCTTGTT 60.885 50.000 22.48 0.00 0.00 2.83
4459 6468 1.082756 CAGCGCGTTGTCCTTGTTC 60.083 57.895 15.40 0.00 0.00 3.18
4460 6469 1.227556 AGCGCGTTGTCCTTGTTCT 60.228 52.632 8.43 0.00 0.00 3.01
4461 6470 1.082756 GCGCGTTGTCCTTGTTCTG 60.083 57.895 8.43 0.00 0.00 3.02
4462 6471 1.772063 GCGCGTTGTCCTTGTTCTGT 61.772 55.000 8.43 0.00 0.00 3.41
4463 6472 0.655733 CGCGTTGTCCTTGTTCTGTT 59.344 50.000 0.00 0.00 0.00 3.16
4464 6473 1.063469 CGCGTTGTCCTTGTTCTGTTT 59.937 47.619 0.00 0.00 0.00 2.83
4465 6474 2.477189 CGCGTTGTCCTTGTTCTGTTTT 60.477 45.455 0.00 0.00 0.00 2.43
4466 6475 3.242478 CGCGTTGTCCTTGTTCTGTTTTA 60.242 43.478 0.00 0.00 0.00 1.52
4467 6476 4.553938 CGCGTTGTCCTTGTTCTGTTTTAT 60.554 41.667 0.00 0.00 0.00 1.40
4468 6477 5.333492 CGCGTTGTCCTTGTTCTGTTTTATA 60.333 40.000 0.00 0.00 0.00 0.98
4469 6478 6.608610 GCGTTGTCCTTGTTCTGTTTTATAT 58.391 36.000 0.00 0.00 0.00 0.86
4470 6479 6.523201 GCGTTGTCCTTGTTCTGTTTTATATG 59.477 38.462 0.00 0.00 0.00 1.78
4471 6480 7.581476 CGTTGTCCTTGTTCTGTTTTATATGT 58.419 34.615 0.00 0.00 0.00 2.29
4472 6481 7.533900 CGTTGTCCTTGTTCTGTTTTATATGTG 59.466 37.037 0.00 0.00 0.00 3.21
4473 6482 8.564574 GTTGTCCTTGTTCTGTTTTATATGTGA 58.435 33.333 0.00 0.00 0.00 3.58
4474 6483 8.862325 TGTCCTTGTTCTGTTTTATATGTGAT 57.138 30.769 0.00 0.00 0.00 3.06
4475 6484 8.729756 TGTCCTTGTTCTGTTTTATATGTGATG 58.270 33.333 0.00 0.00 0.00 3.07
4476 6485 8.730680 GTCCTTGTTCTGTTTTATATGTGATGT 58.269 33.333 0.00 0.00 0.00 3.06
4477 6486 9.295825 TCCTTGTTCTGTTTTATATGTGATGTT 57.704 29.630 0.00 0.00 0.00 2.71
4478 6487 9.912634 CCTTGTTCTGTTTTATATGTGATGTTT 57.087 29.630 0.00 0.00 0.00 2.83
4492 6501 6.713762 TGTGATGTTTCTTTTCTGGATTGT 57.286 33.333 0.00 0.00 0.00 2.71
4493 6502 6.506147 TGTGATGTTTCTTTTCTGGATTGTG 58.494 36.000 0.00 0.00 0.00 3.33
4494 6503 5.403466 GTGATGTTTCTTTTCTGGATTGTGC 59.597 40.000 0.00 0.00 0.00 4.57
4495 6504 5.302568 TGATGTTTCTTTTCTGGATTGTGCT 59.697 36.000 0.00 0.00 0.00 4.40
4496 6505 5.186996 TGTTTCTTTTCTGGATTGTGCTC 57.813 39.130 0.00 0.00 0.00 4.26
4497 6506 4.037923 TGTTTCTTTTCTGGATTGTGCTCC 59.962 41.667 0.00 0.00 35.74 4.70
4498 6507 3.795688 TCTTTTCTGGATTGTGCTCCT 57.204 42.857 0.00 0.00 36.20 3.69
4499 6508 4.104383 TCTTTTCTGGATTGTGCTCCTT 57.896 40.909 0.00 0.00 36.20 3.36
4500 6509 3.822735 TCTTTTCTGGATTGTGCTCCTTG 59.177 43.478 0.00 0.00 36.20 3.61
4501 6510 1.538047 TTCTGGATTGTGCTCCTTGC 58.462 50.000 0.00 0.00 43.25 4.01
4502 6511 0.694771 TCTGGATTGTGCTCCTTGCT 59.305 50.000 0.00 0.00 43.37 3.91
4503 6512 0.809385 CTGGATTGTGCTCCTTGCTG 59.191 55.000 0.00 0.00 43.37 4.41
4504 6513 0.111061 TGGATTGTGCTCCTTGCTGT 59.889 50.000 0.00 0.00 43.37 4.40
4505 6514 1.350684 TGGATTGTGCTCCTTGCTGTA 59.649 47.619 0.00 0.00 43.37 2.74
4506 6515 2.025981 TGGATTGTGCTCCTTGCTGTAT 60.026 45.455 0.00 0.00 43.37 2.29
4507 6516 2.357009 GGATTGTGCTCCTTGCTGTATG 59.643 50.000 0.00 0.00 43.37 2.39
4508 6517 2.566833 TTGTGCTCCTTGCTGTATGT 57.433 45.000 0.00 0.00 43.37 2.29
4509 6518 3.694043 TTGTGCTCCTTGCTGTATGTA 57.306 42.857 0.00 0.00 43.37 2.29
4510 6519 3.912496 TGTGCTCCTTGCTGTATGTAT 57.088 42.857 0.00 0.00 43.37 2.29
4511 6520 4.220693 TGTGCTCCTTGCTGTATGTATT 57.779 40.909 0.00 0.00 43.37 1.89
4512 6521 5.351948 TGTGCTCCTTGCTGTATGTATTA 57.648 39.130 0.00 0.00 43.37 0.98
4513 6522 5.359756 TGTGCTCCTTGCTGTATGTATTAG 58.640 41.667 0.00 0.00 43.37 1.73
4514 6523 4.752101 GTGCTCCTTGCTGTATGTATTAGG 59.248 45.833 0.00 0.00 43.37 2.69
4515 6524 4.653801 TGCTCCTTGCTGTATGTATTAGGA 59.346 41.667 0.00 0.00 43.37 2.94
4516 6525 5.307976 TGCTCCTTGCTGTATGTATTAGGAT 59.692 40.000 0.00 0.00 43.37 3.24
4517 6526 5.641209 GCTCCTTGCTGTATGTATTAGGATG 59.359 44.000 0.00 0.00 38.95 3.51
4518 6527 5.551233 TCCTTGCTGTATGTATTAGGATGC 58.449 41.667 0.00 0.00 0.00 3.91
4519 6528 5.071653 TCCTTGCTGTATGTATTAGGATGCA 59.928 40.000 0.00 0.00 32.29 3.96
4520 6529 5.942236 CCTTGCTGTATGTATTAGGATGCAT 59.058 40.000 0.00 0.00 40.90 3.96
4521 6530 7.038373 TCCTTGCTGTATGTATTAGGATGCATA 60.038 37.037 0.00 0.00 39.07 3.14
4522 6531 7.279536 CCTTGCTGTATGTATTAGGATGCATAG 59.720 40.741 0.00 0.00 40.17 2.23
4523 6532 6.108687 TGCTGTATGTATTAGGATGCATAGC 58.891 40.000 0.00 0.18 40.17 2.97
4524 6533 6.108687 GCTGTATGTATTAGGATGCATAGCA 58.891 40.000 0.00 0.00 40.17 3.49
4525 6534 6.257411 GCTGTATGTATTAGGATGCATAGCAG 59.743 42.308 0.00 14.67 43.65 4.24
4526 6535 6.643388 TGTATGTATTAGGATGCATAGCAGG 58.357 40.000 0.00 0.00 43.65 4.85
4527 6536 6.440328 TGTATGTATTAGGATGCATAGCAGGA 59.560 38.462 0.00 0.00 43.65 3.86
4528 6537 6.572182 ATGTATTAGGATGCATAGCAGGAT 57.428 37.500 0.00 0.00 43.65 3.24
4529 6538 5.982356 TGTATTAGGATGCATAGCAGGATC 58.018 41.667 0.00 0.00 43.65 3.36
4530 6539 5.484998 TGTATTAGGATGCATAGCAGGATCA 59.515 40.000 0.00 0.00 43.65 2.92
4531 6540 2.855209 AGGATGCATAGCAGGATCAC 57.145 50.000 0.00 0.00 43.65 3.06
4532 6541 2.336891 AGGATGCATAGCAGGATCACT 58.663 47.619 0.00 0.00 43.65 3.41
4533 6542 2.709934 AGGATGCATAGCAGGATCACTT 59.290 45.455 0.00 0.00 43.65 3.16
4534 6543 2.812591 GGATGCATAGCAGGATCACTTG 59.187 50.000 0.00 0.00 43.65 3.16
4535 6544 3.474600 GATGCATAGCAGGATCACTTGT 58.525 45.455 0.00 0.00 43.65 3.16
4536 6545 3.354948 TGCATAGCAGGATCACTTGTT 57.645 42.857 0.00 0.00 33.32 2.83
4537 6546 4.486125 TGCATAGCAGGATCACTTGTTA 57.514 40.909 0.00 0.00 33.32 2.41
4538 6547 4.842574 TGCATAGCAGGATCACTTGTTAA 58.157 39.130 0.00 0.00 33.32 2.01
4539 6548 5.439721 TGCATAGCAGGATCACTTGTTAAT 58.560 37.500 0.00 0.00 33.32 1.40
4540 6549 5.297527 TGCATAGCAGGATCACTTGTTAATG 59.702 40.000 0.00 0.00 33.32 1.90
4541 6550 5.755813 CATAGCAGGATCACTTGTTAATGC 58.244 41.667 0.00 0.00 0.00 3.56
4542 6551 3.960571 AGCAGGATCACTTGTTAATGCT 58.039 40.909 0.00 0.00 37.91 3.79
4543 6552 5.102953 AGCAGGATCACTTGTTAATGCTA 57.897 39.130 0.00 0.00 40.74 3.49
4544 6553 5.121811 AGCAGGATCACTTGTTAATGCTAG 58.878 41.667 0.00 0.00 40.74 3.42
4545 6554 5.104776 AGCAGGATCACTTGTTAATGCTAGA 60.105 40.000 0.00 0.00 40.74 2.43
4546 6555 5.236047 GCAGGATCACTTGTTAATGCTAGAG 59.764 44.000 0.00 0.00 0.00 2.43
4547 6556 6.344500 CAGGATCACTTGTTAATGCTAGAGT 58.656 40.000 0.00 0.00 0.00 3.24
4548 6557 7.492524 CAGGATCACTTGTTAATGCTAGAGTA 58.507 38.462 0.00 0.00 0.00 2.59
4549 6558 8.147058 CAGGATCACTTGTTAATGCTAGAGTAT 58.853 37.037 0.00 0.00 0.00 2.12
4550 6559 8.709308 AGGATCACTTGTTAATGCTAGAGTATT 58.291 33.333 0.00 0.00 34.74 1.89
4551 6560 9.331282 GGATCACTTGTTAATGCTAGAGTATTT 57.669 33.333 0.00 0.00 32.67 1.40
4554 6563 9.944376 TCACTTGTTAATGCTAGAGTATTTTCT 57.056 29.630 0.00 0.00 32.67 2.52
4556 6565 9.384764 ACTTGTTAATGCTAGAGTATTTTCTCC 57.615 33.333 0.00 0.00 35.28 3.71
4557 6566 9.383519 CTTGTTAATGCTAGAGTATTTTCTCCA 57.616 33.333 0.00 0.00 35.28 3.86
4558 6567 8.948631 TGTTAATGCTAGAGTATTTTCTCCAG 57.051 34.615 0.00 0.00 35.28 3.86
4559 6568 7.987458 TGTTAATGCTAGAGTATTTTCTCCAGG 59.013 37.037 0.00 0.00 35.28 4.45
4560 6569 4.408182 TGCTAGAGTATTTTCTCCAGGC 57.592 45.455 0.00 0.00 35.28 4.85
4561 6570 3.181475 TGCTAGAGTATTTTCTCCAGGCG 60.181 47.826 0.00 0.00 35.28 5.52
4562 6571 3.181474 GCTAGAGTATTTTCTCCAGGCGT 60.181 47.826 0.00 0.00 35.28 5.68
4563 6572 3.252974 AGAGTATTTTCTCCAGGCGTG 57.747 47.619 0.00 0.00 35.28 5.34
4564 6573 2.093447 AGAGTATTTTCTCCAGGCGTGG 60.093 50.000 19.57 19.57 46.63 4.94
4565 6574 1.628846 AGTATTTTCTCCAGGCGTGGT 59.371 47.619 24.03 7.24 45.28 4.16
4566 6575 2.835764 AGTATTTTCTCCAGGCGTGGTA 59.164 45.455 24.03 11.68 45.28 3.25
4567 6576 3.454812 AGTATTTTCTCCAGGCGTGGTAT 59.545 43.478 24.03 13.06 45.28 2.73
4568 6577 2.396590 TTTTCTCCAGGCGTGGTATC 57.603 50.000 24.03 0.00 45.28 2.24
4569 6578 1.568504 TTTCTCCAGGCGTGGTATCT 58.431 50.000 24.03 0.00 45.28 1.98
4570 6579 1.568504 TTCTCCAGGCGTGGTATCTT 58.431 50.000 24.03 0.00 45.28 2.40
4571 6580 2.447408 TCTCCAGGCGTGGTATCTTA 57.553 50.000 24.03 3.77 45.28 2.10
4572 6581 2.958818 TCTCCAGGCGTGGTATCTTAT 58.041 47.619 24.03 0.00 45.28 1.73
4573 6582 4.108501 TCTCCAGGCGTGGTATCTTATA 57.891 45.455 24.03 2.29 45.28 0.98
4574 6583 4.673968 TCTCCAGGCGTGGTATCTTATAT 58.326 43.478 24.03 0.00 45.28 0.86
4575 6584 5.823312 TCTCCAGGCGTGGTATCTTATATA 58.177 41.667 24.03 0.83 45.28 0.86
4576 6585 5.651139 TCTCCAGGCGTGGTATCTTATATAC 59.349 44.000 24.03 0.00 45.28 1.47
4577 6586 4.708421 TCCAGGCGTGGTATCTTATATACC 59.292 45.833 24.03 7.16 45.28 2.73
4578 6587 4.710375 CCAGGCGTGGTATCTTATATACCT 59.290 45.833 17.47 0.00 43.35 3.08
4579 6588 5.187186 CCAGGCGTGGTATCTTATATACCTT 59.813 44.000 17.47 0.00 43.35 3.50
4580 6589 6.295688 CCAGGCGTGGTATCTTATATACCTTT 60.296 42.308 17.47 0.00 43.35 3.11
4581 6590 6.812160 CAGGCGTGGTATCTTATATACCTTTC 59.188 42.308 13.75 5.58 43.35 2.62
4582 6591 5.803967 GGCGTGGTATCTTATATACCTTTCG 59.196 44.000 13.75 14.70 43.35 3.46
4583 6592 5.287992 GCGTGGTATCTTATATACCTTTCGC 59.712 44.000 21.99 21.99 43.35 4.70
4584 6593 6.618811 CGTGGTATCTTATATACCTTTCGCT 58.381 40.000 13.75 0.00 43.35 4.93
4585 6594 6.527023 CGTGGTATCTTATATACCTTTCGCTG 59.473 42.308 13.75 0.00 43.35 5.18
4586 6595 7.376615 GTGGTATCTTATATACCTTTCGCTGT 58.623 38.462 13.75 0.00 43.35 4.40
4587 6596 7.871463 GTGGTATCTTATATACCTTTCGCTGTT 59.129 37.037 13.75 0.00 43.35 3.16
4588 6597 8.086522 TGGTATCTTATATACCTTTCGCTGTTC 58.913 37.037 13.75 0.00 43.35 3.18
4589 6598 8.086522 GGTATCTTATATACCTTTCGCTGTTCA 58.913 37.037 6.89 0.00 40.58 3.18
4590 6599 9.640963 GTATCTTATATACCTTTCGCTGTTCAT 57.359 33.333 0.00 0.00 0.00 2.57
4595 6604 9.990360 TTATATACCTTTCGCTGTTCATATTCA 57.010 29.630 0.00 0.00 0.00 2.57
4597 6606 7.807977 ATACCTTTCGCTGTTCATATTCATT 57.192 32.000 0.00 0.00 0.00 2.57
4598 6607 5.883661 ACCTTTCGCTGTTCATATTCATTG 58.116 37.500 0.00 0.00 0.00 2.82
4599 6608 5.415701 ACCTTTCGCTGTTCATATTCATTGT 59.584 36.000 0.00 0.00 0.00 2.71
4600 6609 6.071952 ACCTTTCGCTGTTCATATTCATTGTT 60.072 34.615 0.00 0.00 0.00 2.83
4601 6610 6.808212 CCTTTCGCTGTTCATATTCATTGTTT 59.192 34.615 0.00 0.00 0.00 2.83
4602 6611 7.967854 CCTTTCGCTGTTCATATTCATTGTTTA 59.032 33.333 0.00 0.00 0.00 2.01
4603 6612 9.340695 CTTTCGCTGTTCATATTCATTGTTTAA 57.659 29.630 0.00 0.00 0.00 1.52
4604 6613 9.853555 TTTCGCTGTTCATATTCATTGTTTAAT 57.146 25.926 0.00 0.00 0.00 1.40
4605 6614 8.839947 TCGCTGTTCATATTCATTGTTTAATG 57.160 30.769 0.00 0.00 44.03 1.90
4606 6615 8.458052 TCGCTGTTCATATTCATTGTTTAATGT 58.542 29.630 0.00 0.00 43.33 2.71
4607 6616 9.075519 CGCTGTTCATATTCATTGTTTAATGTT 57.924 29.630 0.00 0.00 43.33 2.71
4618 6627 9.820229 TTCATTGTTTAATGTTCGAGATGTTAC 57.180 29.630 0.00 0.00 43.33 2.50
4619 6628 9.214957 TCATTGTTTAATGTTCGAGATGTTACT 57.785 29.630 0.00 0.00 43.33 2.24
4620 6629 9.825972 CATTGTTTAATGTTCGAGATGTTACTT 57.174 29.630 0.00 0.00 39.05 2.24
4622 6631 7.726079 TGTTTAATGTTCGAGATGTTACTTCG 58.274 34.615 0.00 0.00 0.00 3.79
4623 6632 6.880822 TTAATGTTCGAGATGTTACTTCGG 57.119 37.500 5.15 0.00 0.00 4.30
4624 6633 4.713824 ATGTTCGAGATGTTACTTCGGA 57.286 40.909 5.15 0.00 0.00 4.55
4625 6634 4.713824 TGTTCGAGATGTTACTTCGGAT 57.286 40.909 5.15 0.00 0.00 4.18
4626 6635 5.823209 TGTTCGAGATGTTACTTCGGATA 57.177 39.130 5.15 0.00 0.00 2.59
4627 6636 6.198650 TGTTCGAGATGTTACTTCGGATAA 57.801 37.500 5.15 0.00 0.00 1.75
4628 6637 6.263344 TGTTCGAGATGTTACTTCGGATAAG 58.737 40.000 5.15 0.00 0.00 1.73
4629 6638 4.856664 TCGAGATGTTACTTCGGATAAGC 58.143 43.478 5.15 0.00 0.00 3.09
4630 6639 3.982058 CGAGATGTTACTTCGGATAAGCC 59.018 47.826 0.00 0.00 0.00 4.35
4640 6649 3.633361 GGATAAGCCGCTGCCTAAT 57.367 52.632 0.00 0.00 38.69 1.73
4641 6650 2.762535 GGATAAGCCGCTGCCTAATA 57.237 50.000 0.00 0.00 38.69 0.98
4642 6651 3.053831 GGATAAGCCGCTGCCTAATAA 57.946 47.619 0.00 0.00 38.69 1.40
4643 6652 3.408634 GGATAAGCCGCTGCCTAATAAA 58.591 45.455 0.00 0.00 38.69 1.40
4644 6653 3.437049 GGATAAGCCGCTGCCTAATAAAG 59.563 47.826 0.00 0.00 38.69 1.85
4655 6664 3.782889 CCTAATAAAGGCCACTGTTGC 57.217 47.619 5.01 0.00 38.97 4.17
4662 6671 2.280797 GCCACTGTTGCCACGAGA 60.281 61.111 0.00 0.00 0.00 4.04
4663 6672 1.891919 GCCACTGTTGCCACGAGAA 60.892 57.895 0.00 0.00 0.00 2.87
4664 6673 1.444119 GCCACTGTTGCCACGAGAAA 61.444 55.000 0.00 0.00 0.00 2.52
4665 6674 1.021202 CCACTGTTGCCACGAGAAAA 58.979 50.000 0.00 0.00 0.00 2.29
4666 6675 1.608590 CCACTGTTGCCACGAGAAAAT 59.391 47.619 0.00 0.00 0.00 1.82
4667 6676 2.605338 CCACTGTTGCCACGAGAAAATG 60.605 50.000 0.00 0.00 0.00 2.32
4668 6677 2.290367 CACTGTTGCCACGAGAAAATGA 59.710 45.455 0.00 0.00 0.00 2.57
4669 6678 2.948979 ACTGTTGCCACGAGAAAATGAA 59.051 40.909 0.00 0.00 0.00 2.57
4670 6679 3.003689 ACTGTTGCCACGAGAAAATGAAG 59.996 43.478 0.00 0.00 0.00 3.02
4671 6680 3.210227 TGTTGCCACGAGAAAATGAAGA 58.790 40.909 0.00 0.00 0.00 2.87
4672 6681 3.629855 TGTTGCCACGAGAAAATGAAGAA 59.370 39.130 0.00 0.00 0.00 2.52
4673 6682 4.222114 GTTGCCACGAGAAAATGAAGAAG 58.778 43.478 0.00 0.00 0.00 2.85
4674 6683 3.476552 TGCCACGAGAAAATGAAGAAGT 58.523 40.909 0.00 0.00 0.00 3.01
4675 6684 3.250762 TGCCACGAGAAAATGAAGAAGTG 59.749 43.478 0.00 0.00 0.00 3.16
4676 6685 3.498397 GCCACGAGAAAATGAAGAAGTGA 59.502 43.478 0.00 0.00 0.00 3.41
4677 6686 4.024048 GCCACGAGAAAATGAAGAAGTGAA 60.024 41.667 0.00 0.00 0.00 3.18
4678 6687 5.683859 CCACGAGAAAATGAAGAAGTGAAG 58.316 41.667 0.00 0.00 0.00 3.02
4679 6688 5.237344 CCACGAGAAAATGAAGAAGTGAAGT 59.763 40.000 0.00 0.00 0.00 3.01
4680 6689 6.423905 CCACGAGAAAATGAAGAAGTGAAGTA 59.576 38.462 0.00 0.00 0.00 2.24
4681 6690 7.284351 CACGAGAAAATGAAGAAGTGAAGTAC 58.716 38.462 0.00 0.00 0.00 2.73
4682 6691 6.984474 ACGAGAAAATGAAGAAGTGAAGTACA 59.016 34.615 0.00 0.00 0.00 2.90
4683 6692 7.657761 ACGAGAAAATGAAGAAGTGAAGTACAT 59.342 33.333 0.00 0.00 0.00 2.29
4684 6693 8.499162 CGAGAAAATGAAGAAGTGAAGTACATT 58.501 33.333 0.00 0.00 0.00 2.71
4689 6698 9.778741 AAATGAAGAAGTGAAGTACATTAGACA 57.221 29.630 0.00 0.00 0.00 3.41
4690 6699 9.950496 AATGAAGAAGTGAAGTACATTAGACAT 57.050 29.630 0.00 0.00 0.00 3.06
4691 6700 8.763049 TGAAGAAGTGAAGTACATTAGACATG 57.237 34.615 0.00 0.00 0.00 3.21
4692 6701 7.331934 TGAAGAAGTGAAGTACATTAGACATGC 59.668 37.037 0.00 0.00 0.00 4.06
4693 6702 6.701340 AGAAGTGAAGTACATTAGACATGCA 58.299 36.000 0.00 0.00 0.00 3.96
4694 6703 7.161404 AGAAGTGAAGTACATTAGACATGCAA 58.839 34.615 0.00 0.00 0.00 4.08
4695 6704 7.661437 AGAAGTGAAGTACATTAGACATGCAAA 59.339 33.333 0.00 0.00 0.00 3.68
4696 6705 7.928307 AGTGAAGTACATTAGACATGCAAAT 57.072 32.000 0.00 0.00 0.00 2.32
4697 6706 9.448438 AAGTGAAGTACATTAGACATGCAAATA 57.552 29.630 0.00 0.00 0.00 1.40
4698 6707 9.448438 AGTGAAGTACATTAGACATGCAAATAA 57.552 29.630 0.00 0.00 0.00 1.40
4710 6719 8.986477 AGACATGCAAATAATAAAAAGTGGAC 57.014 30.769 0.00 0.00 0.00 4.02
4711 6720 8.584157 AGACATGCAAATAATAAAAAGTGGACA 58.416 29.630 0.00 0.00 0.00 4.02
4712 6721 8.532977 ACATGCAAATAATAAAAAGTGGACAC 57.467 30.769 0.00 0.00 0.00 3.67
4713 6722 8.367156 ACATGCAAATAATAAAAAGTGGACACT 58.633 29.630 0.00 0.00 44.94 3.55
4725 6734 4.287766 AGTGGACACTTATCCTTTCACC 57.712 45.455 0.00 0.00 38.83 4.02
4726 6735 3.009143 AGTGGACACTTATCCTTTCACCC 59.991 47.826 0.00 0.00 38.83 4.61
4727 6736 2.307686 TGGACACTTATCCTTTCACCCC 59.692 50.000 0.00 0.00 39.75 4.95
4728 6737 2.576648 GGACACTTATCCTTTCACCCCT 59.423 50.000 0.00 0.00 35.68 4.79
4729 6738 3.010250 GGACACTTATCCTTTCACCCCTT 59.990 47.826 0.00 0.00 35.68 3.95
4730 6739 4.226620 GGACACTTATCCTTTCACCCCTTA 59.773 45.833 0.00 0.00 35.68 2.69
4731 6740 5.429130 GACACTTATCCTTTCACCCCTTAG 58.571 45.833 0.00 0.00 0.00 2.18
4732 6741 4.850386 ACACTTATCCTTTCACCCCTTAGT 59.150 41.667 0.00 0.00 0.00 2.24
4733 6742 5.312443 ACACTTATCCTTTCACCCCTTAGTT 59.688 40.000 0.00 0.00 0.00 2.24
4734 6743 6.502863 ACACTTATCCTTTCACCCCTTAGTTA 59.497 38.462 0.00 0.00 0.00 2.24
4735 6744 7.184022 ACACTTATCCTTTCACCCCTTAGTTAT 59.816 37.037 0.00 0.00 0.00 1.89
4736 6745 8.711170 CACTTATCCTTTCACCCCTTAGTTATA 58.289 37.037 0.00 0.00 0.00 0.98
4737 6746 9.461734 ACTTATCCTTTCACCCCTTAGTTATAT 57.538 33.333 0.00 0.00 0.00 0.86
4741 6750 8.722622 TCCTTTCACCCCTTAGTTATATAGAG 57.277 38.462 0.00 0.00 0.00 2.43
4742 6751 8.517047 TCCTTTCACCCCTTAGTTATATAGAGA 58.483 37.037 0.00 0.00 0.00 3.10
4743 6752 8.808092 CCTTTCACCCCTTAGTTATATAGAGAG 58.192 40.741 0.00 0.00 0.00 3.20
4744 6753 8.722622 TTTCACCCCTTAGTTATATAGAGAGG 57.277 38.462 0.00 0.00 0.00 3.69
4745 6754 7.658887 TCACCCCTTAGTTATATAGAGAGGA 57.341 40.000 0.00 0.00 0.00 3.71
4746 6755 7.700846 TCACCCCTTAGTTATATAGAGAGGAG 58.299 42.308 0.00 0.00 0.00 3.69
4747 6756 7.520058 TCACCCCTTAGTTATATAGAGAGGAGA 59.480 40.741 0.00 0.00 0.00 3.71
4748 6757 7.832187 CACCCCTTAGTTATATAGAGAGGAGAG 59.168 44.444 0.00 0.00 0.00 3.20
4749 6758 6.831868 CCCCTTAGTTATATAGAGAGGAGAGC 59.168 46.154 0.00 0.00 0.00 4.09
4750 6759 7.406916 CCCTTAGTTATATAGAGAGGAGAGCA 58.593 42.308 0.00 0.00 0.00 4.26
4751 6760 7.338449 CCCTTAGTTATATAGAGAGGAGAGCAC 59.662 44.444 0.00 0.00 0.00 4.40
4752 6761 7.338449 CCTTAGTTATATAGAGAGGAGAGCACC 59.662 44.444 0.00 0.00 0.00 5.01
4753 6762 5.576128 AGTTATATAGAGAGGAGAGCACCC 58.424 45.833 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 5.344743 AGCTTAATCGTGAAGATCCTGAA 57.655 39.130 0.00 0.00 38.98 3.02
18 19 4.211164 TGTTGTCACTGAAGCTTAATCGTG 59.789 41.667 0.00 4.81 0.00 4.35
24 25 4.127171 GGTCTTGTTGTCACTGAAGCTTA 58.873 43.478 0.00 0.00 0.00 3.09
40 41 1.201647 CTTGATGCTTGGCTGGTCTTG 59.798 52.381 0.00 0.00 0.00 3.02
62 63 4.212004 TCACAGCAATCACGAAAAGAAGAG 59.788 41.667 0.00 0.00 0.00 2.85
63 64 4.024893 GTCACAGCAATCACGAAAAGAAGA 60.025 41.667 0.00 0.00 0.00 2.87
73 74 1.601903 TGAAACCGTCACAGCAATCAC 59.398 47.619 0.00 0.00 0.00 3.06
74 75 1.872952 CTGAAACCGTCACAGCAATCA 59.127 47.619 0.00 0.00 31.13 2.57
80 81 3.653344 TCTGAATCTGAAACCGTCACAG 58.347 45.455 0.00 0.00 31.13 3.66
86 87 1.201965 GCGCTTCTGAATCTGAAACCG 60.202 52.381 0.00 13.87 0.00 4.44
119 120 3.055312 GGTTAGACCCAGGTTACTCTTGG 60.055 52.174 0.00 0.00 42.13 3.61
125 126 3.129462 GTCGTAGGTTAGACCCAGGTTAC 59.871 52.174 0.00 0.00 39.75 2.50
135 136 3.508793 CACCTTCCTTGTCGTAGGTTAGA 59.491 47.826 0.00 0.00 38.93 2.10
147 148 1.308998 AGAACAACGCACCTTCCTTG 58.691 50.000 0.00 0.00 0.00 3.61
148 149 1.947456 GAAGAACAACGCACCTTCCTT 59.053 47.619 0.00 0.00 31.41 3.36
158 159 4.213482 CCAGAAAACTAGGGAAGAACAACG 59.787 45.833 0.00 0.00 0.00 4.10
164 165 5.281314 AGATAGCCAGAAAACTAGGGAAGA 58.719 41.667 0.00 0.00 0.00 2.87
191 192 4.345854 AGGAGATTCTTCCGAGTACAACT 58.654 43.478 0.00 0.00 42.29 3.16
304 307 8.630278 ATGTGATCGTTACATGTAACTTAGTC 57.370 34.615 34.33 26.65 42.31 2.59
333 336 6.014584 TGAGTACTCTGCTTTTGGATAGTTCA 60.015 38.462 23.01 0.00 30.54 3.18
354 357 1.967066 AGCTAGCTCGCCAATATGAGT 59.033 47.619 12.68 0.00 34.67 3.41
378 381 4.929211 GGTTTGAAAATACCAATCTGCCAC 59.071 41.667 0.00 0.00 34.48 5.01
550 2521 1.227764 ATGCATGCTCCGCTTCGAT 60.228 52.632 20.33 0.00 0.00 3.59
653 2624 3.815962 CAGGCAGATCCATGAGAATTCTG 59.184 47.826 14.00 0.00 37.47 3.02
668 2639 7.620880 ACAAAATAGTACTTATGACAGGCAGA 58.379 34.615 0.00 0.00 0.00 4.26
752 2723 7.319646 TCATAAACCACAATGCCAAAGTAATC 58.680 34.615 0.00 0.00 0.00 1.75
966 2937 6.799512 AGAATTGCCAATATTTCACTACTGC 58.200 36.000 0.00 0.00 0.00 4.40
1346 3318 5.065988 GCTATCCGGTTCAAAGAAAGCATAA 59.934 40.000 0.00 0.00 0.00 1.90
1573 3548 5.163622 CCGAGCATTTCAAATTATCACCTGT 60.164 40.000 0.00 0.00 0.00 4.00
1582 3557 3.928375 GCAATCACCGAGCATTTCAAATT 59.072 39.130 0.00 0.00 0.00 1.82
1649 3624 5.496556 TCTCTCTCTCCTTCTTGTAGACAG 58.503 45.833 0.00 0.00 0.00 3.51
1793 3768 4.442401 TCAAGGCATGTGATGTCCATAT 57.558 40.909 0.00 0.00 34.84 1.78
1936 3911 6.312918 TCGCCTTCTCTTGTTGTGATTATTAC 59.687 38.462 0.00 0.00 0.00 1.89
2080 4056 3.648067 TCAGACCAAGACTTCAACTCCAT 59.352 43.478 0.00 0.00 0.00 3.41
2434 4410 7.870509 TCCTATCAATCAACTCCTTCAAATG 57.129 36.000 0.00 0.00 0.00 2.32
2606 4583 0.459585 AACCAATCGACGTCCATCCG 60.460 55.000 10.58 0.00 0.00 4.18
2625 4602 9.237187 TGAACATCCTTATTTAGTTTGTGCATA 57.763 29.630 0.00 0.00 0.00 3.14
2647 4624 7.224949 GTGTATACTAGGAAAGGATTGCTGAAC 59.775 40.741 4.17 0.00 37.80 3.18
2655 4632 7.417570 CGAAGTTGGTGTATACTAGGAAAGGAT 60.418 40.741 4.17 0.00 31.77 3.24
2658 4635 6.860080 TCGAAGTTGGTGTATACTAGGAAAG 58.140 40.000 4.17 0.00 0.00 2.62
2662 4639 6.205101 AGTTCGAAGTTGGTGTATACTAGG 57.795 41.667 0.00 0.00 0.00 3.02
2713 4690 2.625790 GCAGAGGTAGTAGAGTGGATGG 59.374 54.545 0.00 0.00 0.00 3.51
2717 4694 4.465886 ACATAGCAGAGGTAGTAGAGTGG 58.534 47.826 0.00 0.00 0.00 4.00
2754 4731 8.470805 AGACCACTTAATTCTAGTACTGTCATG 58.529 37.037 5.39 0.00 0.00 3.07
2763 4740 8.594550 ACAATGTGTAGACCACTTAATTCTAGT 58.405 33.333 0.00 0.00 44.81 2.57
2783 4760 4.597004 AGCATCTGGAATCTTCACAATGT 58.403 39.130 0.00 0.00 0.00 2.71
2789 4766 5.367644 TCTCCAATAGCATCTGGAATCTTCA 59.632 40.000 2.75 0.00 41.20 3.02
3330 5307 0.392729 CAGCAGCTTGGAAGAGAGGG 60.393 60.000 0.00 0.00 0.00 4.30
3423 5400 9.971922 AAATCTAGAAATGTCAAGTTTGAAAGG 57.028 29.630 0.00 0.00 39.21 3.11
3426 5403 9.950680 GTGAAATCTAGAAATGTCAAGTTTGAA 57.049 29.630 0.00 0.00 39.21 2.69
3464 5441 0.465097 AAATGCCAGATGCTCTCCGG 60.465 55.000 0.00 0.00 42.00 5.14
3474 5451 0.178975 ACCCCGTGAAAAATGCCAGA 60.179 50.000 0.00 0.00 0.00 3.86
3663 5640 9.985730 AAGAATTCACTGCTGATTTCATAAAAA 57.014 25.926 8.44 0.00 38.46 1.94
3666 5643 8.339344 TCAAGAATTCACTGCTGATTTCATAA 57.661 30.769 8.44 0.00 38.46 1.90
3747 5725 1.880796 CACTGTGGCACGTCAACGA 60.881 57.895 13.77 0.00 43.02 3.85
3793 5773 5.916661 TGAGGAAACCAGAGTAGTGATAC 57.083 43.478 0.00 0.00 0.00 2.24
3794 5774 6.436027 AGATGAGGAAACCAGAGTAGTGATA 58.564 40.000 0.00 0.00 0.00 2.15
3795 5775 5.276440 AGATGAGGAAACCAGAGTAGTGAT 58.724 41.667 0.00 0.00 0.00 3.06
3796 5776 4.678256 AGATGAGGAAACCAGAGTAGTGA 58.322 43.478 0.00 0.00 0.00 3.41
3896 5904 5.686753 AGGAAACACTGGTTGTACATGTAA 58.313 37.500 7.25 0.00 37.51 2.41
3978 5986 1.168714 GGAAGTAGCAGCAAAGGGTG 58.831 55.000 0.00 0.00 45.24 4.61
4005 6013 0.545309 AGCAGGAGGGCAGTTGTAGA 60.545 55.000 0.00 0.00 35.83 2.59
4012 6020 4.040952 ACAATAATACTAGCAGGAGGGCAG 59.959 45.833 0.00 0.00 35.83 4.85
4013 6021 3.973973 ACAATAATACTAGCAGGAGGGCA 59.026 43.478 0.00 0.00 35.83 5.36
4016 6024 4.757149 GCCAACAATAATACTAGCAGGAGG 59.243 45.833 0.00 0.00 0.00 4.30
4017 6025 4.449068 CGCCAACAATAATACTAGCAGGAG 59.551 45.833 0.00 0.00 0.00 3.69
4026 6034 4.201580 GCAAAAGCACGCCAACAATAATAC 60.202 41.667 0.00 0.00 0.00 1.89
4031 6039 0.104671 AGCAAAAGCACGCCAACAAT 59.895 45.000 0.00 0.00 0.00 2.71
4032 6040 0.108424 AAGCAAAAGCACGCCAACAA 60.108 45.000 0.00 0.00 0.00 2.83
4039 6047 2.124011 ACATGACAAGCAAAAGCACG 57.876 45.000 0.00 0.00 0.00 5.34
4058 6066 8.313292 AGCTTGAAACAATCAATAGGCAAATAA 58.687 29.630 0.00 0.00 46.62 1.40
4082 6090 2.134201 AGCGTTTTAAAAGCCACAGC 57.866 45.000 11.61 8.58 40.32 4.40
4095 6103 6.366332 CAGTCTCAGTCTTACAATAAGCGTTT 59.634 38.462 0.00 0.00 0.00 3.60
4169 6177 5.820423 AGTTCACAACTAGCACACACAAATA 59.180 36.000 0.00 0.00 40.69 1.40
4195 6203 1.135915 CTGATCTGTGAACGGAGGGAG 59.864 57.143 0.00 0.00 34.27 4.30
4202 6210 9.631452 ACAATATATACATCTGATCTGTGAACG 57.369 33.333 0.00 0.00 0.00 3.95
4213 6221 9.678941 ACAACGTGTCTACAATATATACATCTG 57.321 33.333 0.00 0.00 0.00 2.90
4227 6235 5.646467 ACAAACACATACAACGTGTCTAC 57.354 39.130 0.00 0.00 46.65 2.59
4236 6244 4.560136 ATGCGTGAACAAACACATACAA 57.440 36.364 0.00 0.00 40.34 2.41
4238 6246 4.973051 TGAAATGCGTGAACAAACACATAC 59.027 37.500 0.00 0.00 40.34 2.39
4241 6249 3.119673 ACTGAAATGCGTGAACAAACACA 60.120 39.130 0.00 0.00 40.34 3.72
4254 6263 5.006165 GTAGACTGCATACAGACTGAAATGC 59.994 44.000 26.65 26.65 46.28 3.56
4265 6274 6.765989 GGGTATTTCAATGTAGACTGCATACA 59.234 38.462 6.46 1.32 37.53 2.29
4266 6275 6.765989 TGGGTATTTCAATGTAGACTGCATAC 59.234 38.462 6.46 0.40 0.00 2.39
4267 6276 6.894682 TGGGTATTTCAATGTAGACTGCATA 58.105 36.000 6.46 0.00 0.00 3.14
4268 6277 5.754782 TGGGTATTTCAATGTAGACTGCAT 58.245 37.500 0.00 0.00 0.00 3.96
4269 6278 5.172687 TGGGTATTTCAATGTAGACTGCA 57.827 39.130 0.00 0.00 0.00 4.41
4270 6279 6.509418 TTTGGGTATTTCAATGTAGACTGC 57.491 37.500 0.00 0.00 0.00 4.40
4271 6280 7.881142 TGTTTTGGGTATTTCAATGTAGACTG 58.119 34.615 0.00 0.00 0.00 3.51
4272 6281 8.650143 ATGTTTTGGGTATTTCAATGTAGACT 57.350 30.769 0.00 0.00 0.00 3.24
4273 6282 8.519526 TGATGTTTTGGGTATTTCAATGTAGAC 58.480 33.333 0.00 0.00 0.00 2.59
4274 6283 8.642935 TGATGTTTTGGGTATTTCAATGTAGA 57.357 30.769 0.00 0.00 0.00 2.59
4287 6296 9.796120 CGTTTACAAATATATGATGTTTTGGGT 57.204 29.630 9.08 0.00 34.23 4.51
4288 6297 9.243637 CCGTTTACAAATATATGATGTTTTGGG 57.756 33.333 9.08 4.55 34.23 4.12
4292 6301 8.846211 CCCTCCGTTTACAAATATATGATGTTT 58.154 33.333 9.08 0.00 0.00 2.83
4293 6302 8.215050 TCCCTCCGTTTACAAATATATGATGTT 58.785 33.333 9.08 0.00 0.00 2.71
4294 6303 7.741785 TCCCTCCGTTTACAAATATATGATGT 58.258 34.615 8.86 8.86 0.00 3.06
4295 6304 7.148407 GCTCCCTCCGTTTACAAATATATGATG 60.148 40.741 0.00 0.00 0.00 3.07
4296 6305 6.879458 GCTCCCTCCGTTTACAAATATATGAT 59.121 38.462 0.00 0.00 0.00 2.45
4297 6306 6.183361 TGCTCCCTCCGTTTACAAATATATGA 60.183 38.462 0.00 0.00 0.00 2.15
4298 6307 5.995282 TGCTCCCTCCGTTTACAAATATATG 59.005 40.000 0.00 0.00 0.00 1.78
4299 6308 6.182507 TGCTCCCTCCGTTTACAAATATAT 57.817 37.500 0.00 0.00 0.00 0.86
4300 6309 5.617528 TGCTCCCTCCGTTTACAAATATA 57.382 39.130 0.00 0.00 0.00 0.86
4301 6310 4.497291 TGCTCCCTCCGTTTACAAATAT 57.503 40.909 0.00 0.00 0.00 1.28
4302 6311 3.985019 TGCTCCCTCCGTTTACAAATA 57.015 42.857 0.00 0.00 0.00 1.40
4303 6312 2.871096 TGCTCCCTCCGTTTACAAAT 57.129 45.000 0.00 0.00 0.00 2.32
4304 6313 2.304761 AGATGCTCCCTCCGTTTACAAA 59.695 45.455 0.00 0.00 0.00 2.83
4305 6314 1.906574 AGATGCTCCCTCCGTTTACAA 59.093 47.619 0.00 0.00 0.00 2.41
4306 6315 1.568504 AGATGCTCCCTCCGTTTACA 58.431 50.000 0.00 0.00 0.00 2.41
4307 6316 3.069729 ACATAGATGCTCCCTCCGTTTAC 59.930 47.826 0.00 0.00 0.00 2.01
4308 6317 3.305720 ACATAGATGCTCCCTCCGTTTA 58.694 45.455 0.00 0.00 0.00 2.01
4309 6318 2.119495 ACATAGATGCTCCCTCCGTTT 58.881 47.619 0.00 0.00 0.00 3.60
4310 6319 1.794714 ACATAGATGCTCCCTCCGTT 58.205 50.000 0.00 0.00 0.00 4.44
4311 6320 1.414181 CAACATAGATGCTCCCTCCGT 59.586 52.381 0.00 0.00 0.00 4.69
4312 6321 1.414181 ACAACATAGATGCTCCCTCCG 59.586 52.381 0.00 0.00 0.00 4.63
4313 6322 2.546795 CGACAACATAGATGCTCCCTCC 60.547 54.545 0.00 0.00 0.00 4.30
4314 6323 2.748605 CGACAACATAGATGCTCCCTC 58.251 52.381 0.00 0.00 0.00 4.30
4315 6324 1.202580 GCGACAACATAGATGCTCCCT 60.203 52.381 0.00 0.00 0.00 4.20
4316 6325 1.221414 GCGACAACATAGATGCTCCC 58.779 55.000 0.00 0.00 0.00 4.30
4317 6326 1.202580 AGGCGACAACATAGATGCTCC 60.203 52.381 0.00 0.00 0.00 4.70
4318 6327 2.231215 AGGCGACAACATAGATGCTC 57.769 50.000 0.00 0.00 0.00 4.26
4319 6328 4.342862 AATAGGCGACAACATAGATGCT 57.657 40.909 0.00 0.00 0.00 3.79
4320 6329 4.511454 TGAAATAGGCGACAACATAGATGC 59.489 41.667 0.00 0.00 0.00 3.91
4321 6330 5.755375 ACTGAAATAGGCGACAACATAGATG 59.245 40.000 0.00 0.00 0.00 2.90
4322 6331 5.918608 ACTGAAATAGGCGACAACATAGAT 58.081 37.500 0.00 0.00 0.00 1.98
4323 6332 5.339008 ACTGAAATAGGCGACAACATAGA 57.661 39.130 0.00 0.00 0.00 1.98
4324 6333 5.812642 AGAACTGAAATAGGCGACAACATAG 59.187 40.000 0.00 0.00 0.00 2.23
4325 6334 5.580691 CAGAACTGAAATAGGCGACAACATA 59.419 40.000 0.00 0.00 0.00 2.29
4326 6335 4.393062 CAGAACTGAAATAGGCGACAACAT 59.607 41.667 0.00 0.00 0.00 2.71
4327 6336 3.745975 CAGAACTGAAATAGGCGACAACA 59.254 43.478 0.00 0.00 0.00 3.33
4328 6337 3.125316 CCAGAACTGAAATAGGCGACAAC 59.875 47.826 3.19 0.00 0.00 3.32
4329 6338 3.334691 CCAGAACTGAAATAGGCGACAA 58.665 45.455 3.19 0.00 0.00 3.18
4330 6339 2.935238 GCCAGAACTGAAATAGGCGACA 60.935 50.000 3.19 0.00 31.88 4.35
4331 6340 1.666189 GCCAGAACTGAAATAGGCGAC 59.334 52.381 3.19 0.00 31.88 5.19
4332 6341 1.555075 AGCCAGAACTGAAATAGGCGA 59.445 47.619 3.19 0.00 46.34 5.54
4333 6342 1.667724 CAGCCAGAACTGAAATAGGCG 59.332 52.381 3.19 0.00 46.34 5.52
4334 6343 2.716217 ACAGCCAGAACTGAAATAGGC 58.284 47.619 3.19 0.00 40.25 3.93
4335 6344 6.817765 TTTAACAGCCAGAACTGAAATAGG 57.182 37.500 3.19 0.00 40.25 2.57
4336 6345 9.167311 AGTATTTAACAGCCAGAACTGAAATAG 57.833 33.333 3.19 0.00 40.25 1.73
4338 6347 8.947115 GTAGTATTTAACAGCCAGAACTGAAAT 58.053 33.333 3.19 3.49 40.25 2.17
4339 6348 8.154856 AGTAGTATTTAACAGCCAGAACTGAAA 58.845 33.333 3.19 0.00 40.25 2.69
4340 6349 7.676947 AGTAGTATTTAACAGCCAGAACTGAA 58.323 34.615 3.19 0.00 40.25 3.02
4341 6350 7.241042 AGTAGTATTTAACAGCCAGAACTGA 57.759 36.000 3.19 0.00 40.25 3.41
4342 6351 6.253727 CGAGTAGTATTTAACAGCCAGAACTG 59.746 42.308 0.00 0.00 43.59 3.16
4343 6352 6.071503 ACGAGTAGTATTTAACAGCCAGAACT 60.072 38.462 0.00 0.00 0.00 3.01
4344 6353 6.034683 CACGAGTAGTATTTAACAGCCAGAAC 59.965 42.308 0.00 0.00 0.00 3.01
4345 6354 6.097356 CACGAGTAGTATTTAACAGCCAGAA 58.903 40.000 0.00 0.00 0.00 3.02
4346 6355 5.184479 ACACGAGTAGTATTTAACAGCCAGA 59.816 40.000 0.00 0.00 0.00 3.86
4347 6356 5.408356 ACACGAGTAGTATTTAACAGCCAG 58.592 41.667 0.00 0.00 0.00 4.85
4348 6357 5.395682 ACACGAGTAGTATTTAACAGCCA 57.604 39.130 0.00 0.00 0.00 4.75
4349 6358 5.636543 ACAACACGAGTAGTATTTAACAGCC 59.363 40.000 0.00 0.00 0.00 4.85
4350 6359 6.364165 TCACAACACGAGTAGTATTTAACAGC 59.636 38.462 0.00 0.00 0.00 4.40
4351 6360 7.862741 TCACAACACGAGTAGTATTTAACAG 57.137 36.000 0.00 0.00 0.00 3.16
4352 6361 8.821147 AATCACAACACGAGTAGTATTTAACA 57.179 30.769 0.00 0.00 0.00 2.41
4353 6362 8.918658 TGAATCACAACACGAGTAGTATTTAAC 58.081 33.333 0.00 0.00 0.00 2.01
4354 6363 9.647797 ATGAATCACAACACGAGTAGTATTTAA 57.352 29.630 0.00 0.00 0.00 1.52
4356 6365 9.647797 TTATGAATCACAACACGAGTAGTATTT 57.352 29.630 0.00 0.00 0.00 1.40
4357 6366 9.817809 ATTATGAATCACAACACGAGTAGTATT 57.182 29.630 0.00 0.00 0.00 1.89
4358 6367 9.249457 CATTATGAATCACAACACGAGTAGTAT 57.751 33.333 0.00 0.00 0.00 2.12
4359 6368 8.463607 TCATTATGAATCACAACACGAGTAGTA 58.536 33.333 0.00 0.00 0.00 1.82
4360 6369 7.275779 GTCATTATGAATCACAACACGAGTAGT 59.724 37.037 0.00 0.00 0.00 2.73
4361 6370 7.275560 TGTCATTATGAATCACAACACGAGTAG 59.724 37.037 0.00 0.00 0.00 2.57
4362 6371 7.093992 TGTCATTATGAATCACAACACGAGTA 58.906 34.615 0.00 0.00 0.00 2.59
4363 6372 5.931724 TGTCATTATGAATCACAACACGAGT 59.068 36.000 0.00 0.00 0.00 4.18
4364 6373 6.311200 TCTGTCATTATGAATCACAACACGAG 59.689 38.462 0.00 0.00 0.00 4.18
4365 6374 6.162777 TCTGTCATTATGAATCACAACACGA 58.837 36.000 0.00 0.00 0.00 4.35
4366 6375 6.407475 TCTGTCATTATGAATCACAACACG 57.593 37.500 0.00 0.00 0.00 4.49
4391 6400 8.870116 AGCCAACTCTGTTAAAAGGAAATAAAT 58.130 29.630 0.00 0.00 0.00 1.40
4392 6401 8.245195 AGCCAACTCTGTTAAAAGGAAATAAA 57.755 30.769 0.00 0.00 0.00 1.40
4393 6402 7.833285 AGCCAACTCTGTTAAAAGGAAATAA 57.167 32.000 0.00 0.00 0.00 1.40
4394 6403 7.286775 ACAAGCCAACTCTGTTAAAAGGAAATA 59.713 33.333 0.00 0.00 0.00 1.40
4395 6404 6.098266 ACAAGCCAACTCTGTTAAAAGGAAAT 59.902 34.615 0.00 0.00 0.00 2.17
4396 6405 5.420739 ACAAGCCAACTCTGTTAAAAGGAAA 59.579 36.000 0.00 0.00 0.00 3.13
4397 6406 4.953579 ACAAGCCAACTCTGTTAAAAGGAA 59.046 37.500 0.00 0.00 0.00 3.36
4398 6407 4.338118 CACAAGCCAACTCTGTTAAAAGGA 59.662 41.667 0.00 0.00 0.00 3.36
4399 6408 4.338118 TCACAAGCCAACTCTGTTAAAAGG 59.662 41.667 0.00 0.00 0.00 3.11
4400 6409 5.499139 TCACAAGCCAACTCTGTTAAAAG 57.501 39.130 0.00 0.00 0.00 2.27
4401 6410 6.096141 TGAATCACAAGCCAACTCTGTTAAAA 59.904 34.615 0.00 0.00 0.00 1.52
4402 6411 5.592282 TGAATCACAAGCCAACTCTGTTAAA 59.408 36.000 0.00 0.00 0.00 1.52
4403 6412 5.129634 TGAATCACAAGCCAACTCTGTTAA 58.870 37.500 0.00 0.00 0.00 2.01
4404 6413 4.713553 TGAATCACAAGCCAACTCTGTTA 58.286 39.130 0.00 0.00 0.00 2.41
4405 6414 3.554934 TGAATCACAAGCCAACTCTGTT 58.445 40.909 0.00 0.00 0.00 3.16
4406 6415 3.213206 TGAATCACAAGCCAACTCTGT 57.787 42.857 0.00 0.00 0.00 3.41
4407 6416 5.885230 TTATGAATCACAAGCCAACTCTG 57.115 39.130 0.00 0.00 0.00 3.35
4408 6417 6.127535 CCATTTATGAATCACAAGCCAACTCT 60.128 38.462 0.00 0.00 0.00 3.24
4409 6418 6.038356 CCATTTATGAATCACAAGCCAACTC 58.962 40.000 0.00 0.00 0.00 3.01
4410 6419 5.481473 ACCATTTATGAATCACAAGCCAACT 59.519 36.000 0.00 0.00 0.00 3.16
4411 6420 5.723295 ACCATTTATGAATCACAAGCCAAC 58.277 37.500 0.00 0.00 0.00 3.77
4412 6421 5.999205 ACCATTTATGAATCACAAGCCAA 57.001 34.783 0.00 0.00 0.00 4.52
4413 6422 6.017192 CGATACCATTTATGAATCACAAGCCA 60.017 38.462 0.00 0.00 0.00 4.75
4414 6423 6.204688 TCGATACCATTTATGAATCACAAGCC 59.795 38.462 0.00 0.00 0.00 4.35
4415 6424 7.189693 TCGATACCATTTATGAATCACAAGC 57.810 36.000 0.00 0.00 0.00 4.01
4416 6425 8.992073 TGATCGATACCATTTATGAATCACAAG 58.008 33.333 0.00 0.00 0.00 3.16
4417 6426 8.900983 TGATCGATACCATTTATGAATCACAA 57.099 30.769 0.00 0.00 0.00 3.33
4418 6427 7.118245 GCTGATCGATACCATTTATGAATCACA 59.882 37.037 0.00 0.00 0.00 3.58
4419 6428 7.459486 GCTGATCGATACCATTTATGAATCAC 58.541 38.462 0.00 0.00 0.00 3.06
4420 6429 6.311200 CGCTGATCGATACCATTTATGAATCA 59.689 38.462 0.00 0.00 41.67 2.57
4421 6430 6.700020 CGCTGATCGATACCATTTATGAATC 58.300 40.000 0.00 0.00 41.67 2.52
4422 6431 5.063944 GCGCTGATCGATACCATTTATGAAT 59.936 40.000 0.00 0.00 41.67 2.57
4423 6432 4.388773 GCGCTGATCGATACCATTTATGAA 59.611 41.667 0.00 0.00 41.67 2.57
4424 6433 3.926527 GCGCTGATCGATACCATTTATGA 59.073 43.478 0.00 0.00 41.67 2.15
4425 6434 3.241773 CGCGCTGATCGATACCATTTATG 60.242 47.826 5.56 0.00 41.67 1.90
4426 6435 2.923655 CGCGCTGATCGATACCATTTAT 59.076 45.455 5.56 0.00 41.67 1.40
4427 6436 2.287970 ACGCGCTGATCGATACCATTTA 60.288 45.455 5.73 0.00 41.67 1.40
4428 6437 1.139989 CGCGCTGATCGATACCATTT 58.860 50.000 5.56 0.00 41.67 2.32
4429 6438 0.032130 ACGCGCTGATCGATACCATT 59.968 50.000 5.73 0.00 41.67 3.16
4430 6439 0.032130 AACGCGCTGATCGATACCAT 59.968 50.000 5.73 0.00 41.67 3.55
4431 6440 0.869880 CAACGCGCTGATCGATACCA 60.870 55.000 5.73 0.00 41.67 3.25
4432 6441 0.870307 ACAACGCGCTGATCGATACC 60.870 55.000 17.68 0.00 41.67 2.73
4433 6442 0.498927 GACAACGCGCTGATCGATAC 59.501 55.000 17.68 0.00 41.67 2.24
4434 6443 0.594028 GGACAACGCGCTGATCGATA 60.594 55.000 17.68 0.00 41.67 2.92
4435 6444 1.878522 GGACAACGCGCTGATCGAT 60.879 57.895 17.68 0.00 41.67 3.59
4436 6445 2.486636 AAGGACAACGCGCTGATCGA 62.487 55.000 17.68 0.00 41.67 3.59
4437 6446 2.094659 AAGGACAACGCGCTGATCG 61.095 57.895 17.68 0.00 42.12 3.69
4438 6447 1.291877 ACAAGGACAACGCGCTGATC 61.292 55.000 17.68 9.71 0.00 2.92
4439 6448 0.884704 AACAAGGACAACGCGCTGAT 60.885 50.000 17.68 0.00 0.00 2.90
4440 6449 1.495584 GAACAAGGACAACGCGCTGA 61.496 55.000 17.68 0.00 0.00 4.26
4441 6450 1.082756 GAACAAGGACAACGCGCTG 60.083 57.895 5.73 7.11 0.00 5.18
4442 6451 1.227556 AGAACAAGGACAACGCGCT 60.228 52.632 5.73 0.00 0.00 5.92
4443 6452 1.082756 CAGAACAAGGACAACGCGC 60.083 57.895 5.73 0.00 0.00 6.86
4444 6453 0.655733 AACAGAACAAGGACAACGCG 59.344 50.000 3.53 3.53 0.00 6.01
4445 6454 2.844122 AAACAGAACAAGGACAACGC 57.156 45.000 0.00 0.00 0.00 4.84
4446 6455 7.533900 CACATATAAAACAGAACAAGGACAACG 59.466 37.037 0.00 0.00 0.00 4.10
4447 6456 8.564574 TCACATATAAAACAGAACAAGGACAAC 58.435 33.333 0.00 0.00 0.00 3.32
4448 6457 8.684386 TCACATATAAAACAGAACAAGGACAA 57.316 30.769 0.00 0.00 0.00 3.18
4449 6458 8.729756 CATCACATATAAAACAGAACAAGGACA 58.270 33.333 0.00 0.00 0.00 4.02
4450 6459 8.730680 ACATCACATATAAAACAGAACAAGGAC 58.269 33.333 0.00 0.00 0.00 3.85
4451 6460 8.862325 ACATCACATATAAAACAGAACAAGGA 57.138 30.769 0.00 0.00 0.00 3.36
4452 6461 9.912634 AAACATCACATATAAAACAGAACAAGG 57.087 29.630 0.00 0.00 0.00 3.61
4466 6475 9.028284 ACAATCCAGAAAAGAAACATCACATAT 57.972 29.630 0.00 0.00 0.00 1.78
4467 6476 8.298854 CACAATCCAGAAAAGAAACATCACATA 58.701 33.333 0.00 0.00 0.00 2.29
4468 6477 7.149973 CACAATCCAGAAAAGAAACATCACAT 58.850 34.615 0.00 0.00 0.00 3.21
4469 6478 6.506147 CACAATCCAGAAAAGAAACATCACA 58.494 36.000 0.00 0.00 0.00 3.58
4470 6479 5.403466 GCACAATCCAGAAAAGAAACATCAC 59.597 40.000 0.00 0.00 0.00 3.06
4471 6480 5.302568 AGCACAATCCAGAAAAGAAACATCA 59.697 36.000 0.00 0.00 0.00 3.07
4472 6481 5.776744 AGCACAATCCAGAAAAGAAACATC 58.223 37.500 0.00 0.00 0.00 3.06
4473 6482 5.279156 GGAGCACAATCCAGAAAAGAAACAT 60.279 40.000 0.00 0.00 39.34 2.71
4474 6483 4.037923 GGAGCACAATCCAGAAAAGAAACA 59.962 41.667 0.00 0.00 39.34 2.83
4475 6484 4.279420 AGGAGCACAATCCAGAAAAGAAAC 59.721 41.667 0.00 0.00 42.26 2.78
4476 6485 4.473444 AGGAGCACAATCCAGAAAAGAAA 58.527 39.130 0.00 0.00 42.26 2.52
4477 6486 4.104383 AGGAGCACAATCCAGAAAAGAA 57.896 40.909 0.00 0.00 42.26 2.52
4478 6487 3.795688 AGGAGCACAATCCAGAAAAGA 57.204 42.857 0.00 0.00 42.26 2.52
4479 6488 3.613432 GCAAGGAGCACAATCCAGAAAAG 60.613 47.826 0.00 0.00 44.79 2.27
4480 6489 2.297033 GCAAGGAGCACAATCCAGAAAA 59.703 45.455 0.00 0.00 44.79 2.29
4481 6490 1.888512 GCAAGGAGCACAATCCAGAAA 59.111 47.619 0.00 0.00 44.79 2.52
4482 6491 1.538047 GCAAGGAGCACAATCCAGAA 58.462 50.000 0.00 0.00 44.79 3.02
4483 6492 3.254629 GCAAGGAGCACAATCCAGA 57.745 52.632 0.00 0.00 44.79 3.86
4493 6502 5.215252 TCCTAATACATACAGCAAGGAGC 57.785 43.478 0.00 0.00 46.19 4.70
4494 6503 5.641209 GCATCCTAATACATACAGCAAGGAG 59.359 44.000 0.00 0.00 35.26 3.69
4495 6504 5.071653 TGCATCCTAATACATACAGCAAGGA 59.928 40.000 0.00 0.00 36.18 3.36
4496 6505 5.308014 TGCATCCTAATACATACAGCAAGG 58.692 41.667 0.00 0.00 0.00 3.61
4497 6506 7.201591 GCTATGCATCCTAATACATACAGCAAG 60.202 40.741 0.19 0.00 32.83 4.01
4498 6507 6.595326 GCTATGCATCCTAATACATACAGCAA 59.405 38.462 0.19 0.00 32.83 3.91
4499 6508 6.108687 GCTATGCATCCTAATACATACAGCA 58.891 40.000 0.19 0.00 27.52 4.41
4500 6509 6.108687 TGCTATGCATCCTAATACATACAGC 58.891 40.000 0.19 1.99 31.71 4.40
4501 6510 6.760298 CCTGCTATGCATCCTAATACATACAG 59.240 42.308 0.19 0.00 38.13 2.74
4502 6511 6.440328 TCCTGCTATGCATCCTAATACATACA 59.560 38.462 0.19 0.00 38.13 2.29
4503 6512 6.878317 TCCTGCTATGCATCCTAATACATAC 58.122 40.000 0.19 0.00 38.13 2.39
4504 6513 7.345392 TGATCCTGCTATGCATCCTAATACATA 59.655 37.037 0.19 0.00 38.13 2.29
4505 6514 6.157471 TGATCCTGCTATGCATCCTAATACAT 59.843 38.462 0.19 0.00 38.13 2.29
4506 6515 5.484998 TGATCCTGCTATGCATCCTAATACA 59.515 40.000 0.19 0.00 38.13 2.29
4507 6516 5.814705 GTGATCCTGCTATGCATCCTAATAC 59.185 44.000 0.19 0.00 38.13 1.89
4508 6517 5.723405 AGTGATCCTGCTATGCATCCTAATA 59.277 40.000 0.19 0.00 38.13 0.98
4509 6518 4.535294 AGTGATCCTGCTATGCATCCTAAT 59.465 41.667 0.19 0.00 38.13 1.73
4510 6519 3.906218 AGTGATCCTGCTATGCATCCTAA 59.094 43.478 0.19 0.00 38.13 2.69
4511 6520 3.514539 AGTGATCCTGCTATGCATCCTA 58.485 45.455 0.19 0.00 38.13 2.94
4512 6521 2.336891 AGTGATCCTGCTATGCATCCT 58.663 47.619 0.19 0.00 38.13 3.24
4513 6522 2.812591 CAAGTGATCCTGCTATGCATCC 59.187 50.000 0.19 0.00 38.13 3.51
4514 6523 3.474600 ACAAGTGATCCTGCTATGCATC 58.525 45.455 0.19 0.00 38.13 3.91
4515 6524 3.572632 ACAAGTGATCCTGCTATGCAT 57.427 42.857 3.79 3.79 38.13 3.96
4516 6525 3.354948 AACAAGTGATCCTGCTATGCA 57.645 42.857 0.00 0.00 36.92 3.96
4517 6526 5.755813 CATTAACAAGTGATCCTGCTATGC 58.244 41.667 0.00 0.00 0.00 3.14
4518 6527 5.530171 AGCATTAACAAGTGATCCTGCTATG 59.470 40.000 0.00 0.00 36.98 2.23
4519 6528 5.688807 AGCATTAACAAGTGATCCTGCTAT 58.311 37.500 0.00 0.00 36.98 2.97
4520 6529 5.102953 AGCATTAACAAGTGATCCTGCTA 57.897 39.130 0.00 0.00 36.98 3.49
4521 6530 3.960571 AGCATTAACAAGTGATCCTGCT 58.039 40.909 0.00 0.00 34.10 4.24
4522 6531 5.118990 TCTAGCATTAACAAGTGATCCTGC 58.881 41.667 0.00 0.00 0.00 4.85
4523 6532 6.344500 ACTCTAGCATTAACAAGTGATCCTG 58.656 40.000 0.00 0.00 0.00 3.86
4524 6533 6.552445 ACTCTAGCATTAACAAGTGATCCT 57.448 37.500 0.00 0.00 0.00 3.24
4525 6534 8.894768 AATACTCTAGCATTAACAAGTGATCC 57.105 34.615 0.00 0.00 0.00 3.36
4528 6537 9.944376 AGAAAATACTCTAGCATTAACAAGTGA 57.056 29.630 0.00 0.00 0.00 3.41
4530 6539 9.384764 GGAGAAAATACTCTAGCATTAACAAGT 57.615 33.333 0.00 0.00 37.13 3.16
4531 6540 9.383519 TGGAGAAAATACTCTAGCATTAACAAG 57.616 33.333 0.00 0.00 37.13 3.16
4532 6541 9.383519 CTGGAGAAAATACTCTAGCATTAACAA 57.616 33.333 0.00 0.00 38.31 2.83
4533 6542 7.987458 CCTGGAGAAAATACTCTAGCATTAACA 59.013 37.037 0.00 0.00 41.82 2.41
4534 6543 7.041712 GCCTGGAGAAAATACTCTAGCATTAAC 60.042 40.741 0.00 0.00 41.82 2.01
4535 6544 6.992715 GCCTGGAGAAAATACTCTAGCATTAA 59.007 38.462 0.00 0.00 41.82 1.40
4536 6545 6.525629 GCCTGGAGAAAATACTCTAGCATTA 58.474 40.000 0.00 0.00 41.82 1.90
4537 6546 5.372373 GCCTGGAGAAAATACTCTAGCATT 58.628 41.667 0.00 0.00 41.82 3.56
4538 6547 4.502259 CGCCTGGAGAAAATACTCTAGCAT 60.502 45.833 0.00 0.00 41.82 3.79
4539 6548 3.181475 CGCCTGGAGAAAATACTCTAGCA 60.181 47.826 0.00 0.00 41.82 3.49
4540 6549 3.181474 ACGCCTGGAGAAAATACTCTAGC 60.181 47.826 3.87 0.00 41.82 3.42
4541 6550 4.363999 CACGCCTGGAGAAAATACTCTAG 58.636 47.826 3.87 0.00 42.46 2.43
4542 6551 3.132289 CCACGCCTGGAGAAAATACTCTA 59.868 47.826 3.87 0.00 40.55 2.43
4543 6552 2.093447 CCACGCCTGGAGAAAATACTCT 60.093 50.000 3.87 0.00 40.55 3.24
4544 6553 2.280628 CCACGCCTGGAGAAAATACTC 58.719 52.381 3.87 0.00 40.55 2.59
4545 6554 1.628846 ACCACGCCTGGAGAAAATACT 59.371 47.619 8.88 0.00 40.55 2.12
4546 6555 2.109425 ACCACGCCTGGAGAAAATAC 57.891 50.000 8.88 0.00 40.55 1.89
4547 6556 3.709653 AGATACCACGCCTGGAGAAAATA 59.290 43.478 8.88 0.00 40.55 1.40
4548 6557 2.505819 AGATACCACGCCTGGAGAAAAT 59.494 45.455 8.88 0.00 40.55 1.82
4549 6558 1.906574 AGATACCACGCCTGGAGAAAA 59.093 47.619 8.88 0.00 40.55 2.29
4550 6559 1.568504 AGATACCACGCCTGGAGAAA 58.431 50.000 8.88 0.00 40.55 2.52
4551 6560 1.568504 AAGATACCACGCCTGGAGAA 58.431 50.000 8.88 0.00 40.55 2.87
4552 6561 2.447408 TAAGATACCACGCCTGGAGA 57.553 50.000 8.88 0.00 40.55 3.71
4553 6562 5.163540 GGTATATAAGATACCACGCCTGGAG 60.164 48.000 8.88 0.00 42.68 3.86
4554 6563 4.708421 GGTATATAAGATACCACGCCTGGA 59.292 45.833 8.88 0.00 42.68 3.86
4555 6564 4.710375 AGGTATATAAGATACCACGCCTGG 59.290 45.833 14.06 0.00 44.92 4.45
4556 6565 5.916661 AGGTATATAAGATACCACGCCTG 57.083 43.478 14.06 0.00 44.92 4.85
4557 6566 6.349944 CGAAAGGTATATAAGATACCACGCCT 60.350 42.308 14.06 0.00 44.92 5.52
4558 6567 5.803967 CGAAAGGTATATAAGATACCACGCC 59.196 44.000 14.06 2.06 44.92 5.68
4559 6568 5.287992 GCGAAAGGTATATAAGATACCACGC 59.712 44.000 22.60 22.60 44.92 5.34
4560 6569 6.527023 CAGCGAAAGGTATATAAGATACCACG 59.473 42.308 14.06 15.10 44.92 4.94
4561 6570 7.376615 ACAGCGAAAGGTATATAAGATACCAC 58.623 38.462 14.06 5.79 44.92 4.16
4562 6571 7.534723 ACAGCGAAAGGTATATAAGATACCA 57.465 36.000 14.06 0.00 44.92 3.25
4563 6572 8.086522 TGAACAGCGAAAGGTATATAAGATACC 58.913 37.037 5.24 5.24 43.30 2.73
4564 6573 9.640963 ATGAACAGCGAAAGGTATATAAGATAC 57.359 33.333 0.00 0.00 41.81 2.24
4569 6578 9.990360 TGAATATGAACAGCGAAAGGTATATAA 57.010 29.630 0.00 0.00 41.81 0.98
4571 6580 9.507329 AATGAATATGAACAGCGAAAGGTATAT 57.493 29.630 0.00 0.00 41.81 0.86
4572 6581 8.773645 CAATGAATATGAACAGCGAAAGGTATA 58.226 33.333 0.00 0.00 41.81 1.47
4573 6582 7.283127 ACAATGAATATGAACAGCGAAAGGTAT 59.717 33.333 0.00 0.00 41.81 2.73
4574 6583 6.597672 ACAATGAATATGAACAGCGAAAGGTA 59.402 34.615 0.00 0.00 41.81 3.08
4575 6584 5.415701 ACAATGAATATGAACAGCGAAAGGT 59.584 36.000 0.00 0.00 46.81 3.50
4576 6585 5.883661 ACAATGAATATGAACAGCGAAAGG 58.116 37.500 0.00 0.00 0.00 3.11
4577 6586 7.801547 AAACAATGAATATGAACAGCGAAAG 57.198 32.000 0.00 0.00 0.00 2.62
4578 6587 9.853555 ATTAAACAATGAATATGAACAGCGAAA 57.146 25.926 0.00 0.00 0.00 3.46
4579 6588 9.288124 CATTAAACAATGAATATGAACAGCGAA 57.712 29.630 0.00 0.00 31.98 4.70
4580 6589 8.458052 ACATTAAACAATGAATATGAACAGCGA 58.542 29.630 4.46 0.00 34.39 4.93
4581 6590 8.619146 ACATTAAACAATGAATATGAACAGCG 57.381 30.769 4.46 0.00 34.39 5.18
4592 6601 9.820229 GTAACATCTCGAACATTAAACAATGAA 57.180 29.630 4.46 0.00 34.39 2.57
4593 6602 9.214957 AGTAACATCTCGAACATTAAACAATGA 57.785 29.630 4.46 0.00 34.39 2.57
4594 6603 9.825972 AAGTAACATCTCGAACATTAAACAATG 57.174 29.630 0.00 0.00 36.29 2.82
4596 6605 8.218441 CGAAGTAACATCTCGAACATTAAACAA 58.782 33.333 0.00 0.00 0.00 2.83
4597 6606 7.148705 CCGAAGTAACATCTCGAACATTAAACA 60.149 37.037 0.00 0.00 0.00 2.83
4598 6607 7.062605 TCCGAAGTAACATCTCGAACATTAAAC 59.937 37.037 0.00 0.00 0.00 2.01
4599 6608 7.092079 TCCGAAGTAACATCTCGAACATTAAA 58.908 34.615 0.00 0.00 0.00 1.52
4600 6609 6.623486 TCCGAAGTAACATCTCGAACATTAA 58.377 36.000 0.00 0.00 0.00 1.40
4601 6610 6.198650 TCCGAAGTAACATCTCGAACATTA 57.801 37.500 0.00 0.00 0.00 1.90
4602 6611 5.068234 TCCGAAGTAACATCTCGAACATT 57.932 39.130 0.00 0.00 0.00 2.71
4603 6612 4.713824 TCCGAAGTAACATCTCGAACAT 57.286 40.909 0.00 0.00 0.00 2.71
4604 6613 4.713824 ATCCGAAGTAACATCTCGAACA 57.286 40.909 0.00 0.00 0.00 3.18
4605 6614 5.173492 GCTTATCCGAAGTAACATCTCGAAC 59.827 44.000 0.00 0.00 0.00 3.95
4606 6615 5.279384 GCTTATCCGAAGTAACATCTCGAA 58.721 41.667 0.00 0.00 0.00 3.71
4607 6616 4.261489 GGCTTATCCGAAGTAACATCTCGA 60.261 45.833 0.00 0.00 0.00 4.04
4608 6617 3.982058 GGCTTATCCGAAGTAACATCTCG 59.018 47.826 0.00 0.00 0.00 4.04
4622 6631 2.762535 TATTAGGCAGCGGCTTATCC 57.237 50.000 9.17 1.86 39.70 2.59
4623 6632 3.437049 CCTTTATTAGGCAGCGGCTTATC 59.563 47.826 9.17 0.00 39.70 1.75
4624 6633 3.412386 CCTTTATTAGGCAGCGGCTTAT 58.588 45.455 9.17 8.57 39.70 1.73
4625 6634 2.846193 CCTTTATTAGGCAGCGGCTTA 58.154 47.619 9.17 1.93 39.70 3.09
4626 6635 1.680338 CCTTTATTAGGCAGCGGCTT 58.320 50.000 9.17 3.16 39.70 4.35
4627 6636 3.403936 CCTTTATTAGGCAGCGGCT 57.596 52.632 9.17 9.26 42.39 5.52
4651 6660 3.896648 TCTTCATTTTCTCGTGGCAAC 57.103 42.857 0.00 0.00 0.00 4.17
4652 6661 3.882888 ACTTCTTCATTTTCTCGTGGCAA 59.117 39.130 0.00 0.00 0.00 4.52
4653 6662 3.250762 CACTTCTTCATTTTCTCGTGGCA 59.749 43.478 0.00 0.00 0.00 4.92
4654 6663 3.498397 TCACTTCTTCATTTTCTCGTGGC 59.502 43.478 0.00 0.00 0.00 5.01
4655 6664 5.237344 ACTTCACTTCTTCATTTTCTCGTGG 59.763 40.000 0.00 0.00 0.00 4.94
4656 6665 6.292389 ACTTCACTTCTTCATTTTCTCGTG 57.708 37.500 0.00 0.00 0.00 4.35
4657 6666 6.984474 TGTACTTCACTTCTTCATTTTCTCGT 59.016 34.615 0.00 0.00 0.00 4.18
4658 6667 7.408132 TGTACTTCACTTCTTCATTTTCTCG 57.592 36.000 0.00 0.00 0.00 4.04
4663 6672 9.778741 TGTCTAATGTACTTCACTTCTTCATTT 57.221 29.630 0.00 0.00 0.00 2.32
4664 6673 9.950496 ATGTCTAATGTACTTCACTTCTTCATT 57.050 29.630 0.00 0.00 0.00 2.57
4665 6674 9.376075 CATGTCTAATGTACTTCACTTCTTCAT 57.624 33.333 0.00 0.00 0.00 2.57
4666 6675 7.331934 GCATGTCTAATGTACTTCACTTCTTCA 59.668 37.037 0.00 0.00 0.00 3.02
4667 6676 7.331934 TGCATGTCTAATGTACTTCACTTCTTC 59.668 37.037 0.00 0.00 0.00 2.87
4668 6677 7.161404 TGCATGTCTAATGTACTTCACTTCTT 58.839 34.615 0.00 0.00 0.00 2.52
4669 6678 6.701340 TGCATGTCTAATGTACTTCACTTCT 58.299 36.000 0.00 0.00 0.00 2.85
4670 6679 6.968131 TGCATGTCTAATGTACTTCACTTC 57.032 37.500 0.00 0.00 0.00 3.01
4671 6680 7.744087 TTTGCATGTCTAATGTACTTCACTT 57.256 32.000 0.00 0.00 0.00 3.16
4672 6681 7.928307 ATTTGCATGTCTAATGTACTTCACT 57.072 32.000 0.00 0.00 0.00 3.41
4685 6694 8.584157 TGTCCACTTTTTATTATTTGCATGTCT 58.416 29.630 0.00 0.00 0.00 3.41
4686 6695 8.647226 GTGTCCACTTTTTATTATTTGCATGTC 58.353 33.333 0.00 0.00 0.00 3.06
4687 6696 8.367156 AGTGTCCACTTTTTATTATTTGCATGT 58.633 29.630 0.00 0.00 38.83 3.21
4688 6697 8.761575 AGTGTCCACTTTTTATTATTTGCATG 57.238 30.769 0.00 0.00 38.83 4.06
4704 6713 3.009143 GGGTGAAAGGATAAGTGTCCACT 59.991 47.826 0.00 0.00 44.94 4.00
4705 6714 3.344515 GGGTGAAAGGATAAGTGTCCAC 58.655 50.000 0.00 0.00 40.90 4.02
4706 6715 2.307686 GGGGTGAAAGGATAAGTGTCCA 59.692 50.000 0.00 0.00 40.90 4.02
4707 6716 2.576648 AGGGGTGAAAGGATAAGTGTCC 59.423 50.000 0.00 0.00 38.62 4.02
4708 6717 4.302559 AAGGGGTGAAAGGATAAGTGTC 57.697 45.455 0.00 0.00 0.00 3.67
4709 6718 4.850386 ACTAAGGGGTGAAAGGATAAGTGT 59.150 41.667 0.00 0.00 0.00 3.55
4710 6719 5.437191 ACTAAGGGGTGAAAGGATAAGTG 57.563 43.478 0.00 0.00 0.00 3.16
4711 6720 7.766736 ATAACTAAGGGGTGAAAGGATAAGT 57.233 36.000 0.00 0.00 0.00 2.24
4715 6724 9.327731 CTCTATATAACTAAGGGGTGAAAGGAT 57.672 37.037 0.00 0.00 0.00 3.24
4716 6725 8.517047 TCTCTATATAACTAAGGGGTGAAAGGA 58.483 37.037 0.00 0.00 0.00 3.36
4717 6726 8.722622 TCTCTATATAACTAAGGGGTGAAAGG 57.277 38.462 0.00 0.00 0.00 3.11
4718 6727 8.808092 CCTCTCTATATAACTAAGGGGTGAAAG 58.192 40.741 0.00 0.00 0.00 2.62
4719 6728 8.517047 TCCTCTCTATATAACTAAGGGGTGAAA 58.483 37.037 0.00 0.00 0.00 2.69
4720 6729 8.065385 TCCTCTCTATATAACTAAGGGGTGAA 57.935 38.462 0.00 0.00 0.00 3.18
4721 6730 7.520058 TCTCCTCTCTATATAACTAAGGGGTGA 59.480 40.741 0.00 0.00 0.00 4.02
4722 6731 7.700846 TCTCCTCTCTATATAACTAAGGGGTG 58.299 42.308 0.00 0.00 0.00 4.61
4723 6732 7.531613 GCTCTCCTCTCTATATAACTAAGGGGT 60.532 44.444 0.00 0.00 0.00 4.95
4724 6733 6.831868 GCTCTCCTCTCTATATAACTAAGGGG 59.168 46.154 0.00 0.00 0.00 4.79
4725 6734 7.338449 GTGCTCTCCTCTCTATATAACTAAGGG 59.662 44.444 0.00 0.00 0.00 3.95
4726 6735 7.338449 GGTGCTCTCCTCTCTATATAACTAAGG 59.662 44.444 0.00 0.00 0.00 2.69
4727 6736 7.338449 GGGTGCTCTCCTCTCTATATAACTAAG 59.662 44.444 0.00 0.00 0.00 2.18
4728 6737 7.176490 GGGTGCTCTCCTCTCTATATAACTAA 58.824 42.308 0.00 0.00 0.00 2.24
4729 6738 6.723339 GGGTGCTCTCCTCTCTATATAACTA 58.277 44.000 0.00 0.00 0.00 2.24
4730 6739 5.576128 GGGTGCTCTCCTCTCTATATAACT 58.424 45.833 0.00 0.00 0.00 2.24
4731 6740 5.907866 GGGTGCTCTCCTCTCTATATAAC 57.092 47.826 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.