Multiple sequence alignment - TraesCS7D01G041300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G041300 chr7D 100.000 4379 0 0 1 4379 20597400 20601778 0.000000e+00 8087.0
1 TraesCS7D01G041300 chr7D 83.019 3074 479 24 637 3691 555196715 555193666 0.000000e+00 2745.0
2 TraesCS7D01G041300 chr7D 81.393 3316 519 58 550 3815 20442022 20445289 0.000000e+00 2615.0
3 TraesCS7D01G041300 chr7D 84.017 1608 227 18 896 2486 20521168 20522762 0.000000e+00 1519.0
4 TraesCS7D01G041300 chr7D 95.455 44 2 0 4209 4252 20400598 20400641 2.180000e-08 71.3
5 TraesCS7D01G041300 chr7A 92.576 3637 207 23 271 3878 20705155 20708757 0.000000e+00 5162.0
6 TraesCS7D01G041300 chr7A 88.928 2827 293 8 868 3681 20910583 20913402 0.000000e+00 3469.0
7 TraesCS7D01G041300 chr7A 83.178 3644 483 65 659 4252 20588426 20591989 0.000000e+00 3214.0
8 TraesCS7D01G041300 chr7A 84.759 3097 419 35 851 3917 20650679 20653752 0.000000e+00 3055.0
9 TraesCS7D01G041300 chr7A 83.854 3171 456 36 569 3705 20482396 20485544 0.000000e+00 2968.0
10 TraesCS7D01G041300 chr7A 81.821 3053 504 32 874 3895 20676374 20679406 0.000000e+00 2516.0
11 TraesCS7D01G041300 chr7A 91.824 318 17 3 4071 4379 20983658 20983975 6.730000e-118 435.0
12 TraesCS7D01G041300 chr7A 85.894 397 52 1 862 1254 20490020 20490416 1.880000e-113 420.0
13 TraesCS7D01G041300 chr7A 76.450 569 103 22 336 890 20648556 20649107 3.330000e-71 279.0
14 TraesCS7D01G041300 chr7A 88.696 230 16 5 47 274 20699582 20699803 5.580000e-69 272.0
15 TraesCS7D01G041300 chr7A 90.196 51 5 0 54 104 20478233 20478283 2.830000e-07 67.6
16 TraesCS7D01G041300 chr4A 84.249 2984 401 42 979 3918 713032315 713035273 0.000000e+00 2843.0
17 TraesCS7D01G041300 chr4A 87.356 87 7 3 4170 4252 713017933 713018019 3.600000e-16 97.1
18 TraesCS7D01G041300 chr2A 81.964 3421 547 41 511 3893 733087313 733090701 0.000000e+00 2835.0
19 TraesCS7D01G041300 chr2B 82.598 3195 474 50 511 3654 727685558 727688721 0.000000e+00 2745.0
20 TraesCS7D01G041300 chr2D 82.534 3189 490 41 511 3654 598813599 598816765 0.000000e+00 2741.0
21 TraesCS7D01G041300 chr6B 100.000 34 0 0 827 860 93716313 93716280 3.660000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G041300 chr7D 20597400 20601778 4378 False 8087 8087 100.0000 1 4379 1 chr7D.!!$F4 4378
1 TraesCS7D01G041300 chr7D 555193666 555196715 3049 True 2745 2745 83.0190 637 3691 1 chr7D.!!$R1 3054
2 TraesCS7D01G041300 chr7D 20442022 20445289 3267 False 2615 2615 81.3930 550 3815 1 chr7D.!!$F2 3265
3 TraesCS7D01G041300 chr7D 20521168 20522762 1594 False 1519 1519 84.0170 896 2486 1 chr7D.!!$F3 1590
4 TraesCS7D01G041300 chr7A 20705155 20708757 3602 False 5162 5162 92.5760 271 3878 1 chr7A.!!$F7 3607
5 TraesCS7D01G041300 chr7A 20910583 20913402 2819 False 3469 3469 88.9280 868 3681 1 chr7A.!!$F8 2813
6 TraesCS7D01G041300 chr7A 20588426 20591989 3563 False 3214 3214 83.1780 659 4252 1 chr7A.!!$F4 3593
7 TraesCS7D01G041300 chr7A 20482396 20485544 3148 False 2968 2968 83.8540 569 3705 1 chr7A.!!$F2 3136
8 TraesCS7D01G041300 chr7A 20676374 20679406 3032 False 2516 2516 81.8210 874 3895 1 chr7A.!!$F5 3021
9 TraesCS7D01G041300 chr7A 20648556 20653752 5196 False 1667 3055 80.6045 336 3917 2 chr7A.!!$F10 3581
10 TraesCS7D01G041300 chr4A 713032315 713035273 2958 False 2843 2843 84.2490 979 3918 1 chr4A.!!$F2 2939
11 TraesCS7D01G041300 chr2A 733087313 733090701 3388 False 2835 2835 81.9640 511 3893 1 chr2A.!!$F1 3382
12 TraesCS7D01G041300 chr2B 727685558 727688721 3163 False 2745 2745 82.5980 511 3654 1 chr2B.!!$F1 3143
13 TraesCS7D01G041300 chr2D 598813599 598816765 3166 False 2741 2741 82.5340 511 3654 1 chr2D.!!$F1 3143

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.031857 CTAGACATGCCAGAGCCTCG 59.968 60.0 0.00 0.00 38.69 4.63 F
143 144 0.395724 TAGACATGCCAGAGCCTCGA 60.396 55.0 0.00 0.00 38.69 4.04 F
152 153 0.455410 CAGAGCCTCGACTTCCTCTG 59.545 60.0 10.57 10.57 43.49 3.35 F
157 158 0.605589 CCTCGACTTCCTCTGCACTT 59.394 55.0 0.00 0.00 0.00 3.16 F
2578 4272 0.250510 TGCTTATGGTGGTGAACGCA 60.251 50.0 0.00 0.00 0.00 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2001 3694 1.134280 AGATCCCATGCCTTGTCTTCG 60.134 52.381 0.0 0.0 0.00 3.79 R
2350 4044 3.369052 CCCTCTGCTGTCAATAACCGTAA 60.369 47.826 0.0 0.0 0.00 3.18 R
2578 4272 1.661463 TCCATCTCAAGAGTGCCCTT 58.339 50.000 0.0 0.0 0.00 3.95 R
2833 4566 4.219070 TGGGAGCATCTTCACTTTTGAATG 59.781 41.667 0.0 0.0 41.05 2.67 R
4083 5859 0.030638 AAGCACACAATGGCACGAAC 59.969 50.000 0.0 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.673337 TGCTTTATAATGAAGCCGATCAC 57.327 39.130 9.88 0.00 46.85 3.06
24 25 4.211164 TGCTTTATAATGAAGCCGATCACG 59.789 41.667 9.88 0.00 46.85 4.35
25 26 4.447724 GCTTTATAATGAAGCCGATCACGA 59.552 41.667 2.66 0.00 42.79 4.35
26 27 5.050363 GCTTTATAATGAAGCCGATCACGAA 60.050 40.000 2.66 0.00 42.79 3.85
27 28 6.511121 GCTTTATAATGAAGCCGATCACGAAA 60.511 38.462 2.66 0.00 42.79 3.46
28 29 6.912203 TTATAATGAAGCCGATCACGAAAA 57.088 33.333 0.00 0.00 42.66 2.29
29 30 7.490962 TTATAATGAAGCCGATCACGAAAAT 57.509 32.000 0.00 0.00 42.66 1.82
30 31 8.596271 TTATAATGAAGCCGATCACGAAAATA 57.404 30.769 0.00 0.00 42.66 1.40
31 32 7.672983 ATAATGAAGCCGATCACGAAAATAT 57.327 32.000 0.00 0.00 42.66 1.28
32 33 6.377327 AATGAAGCCGATCACGAAAATATT 57.623 33.333 0.00 0.00 42.66 1.28
33 34 5.811399 TGAAGCCGATCACGAAAATATTT 57.189 34.783 0.00 0.00 42.66 1.40
34 35 6.189677 TGAAGCCGATCACGAAAATATTTT 57.810 33.333 13.24 13.24 42.66 1.82
35 36 6.616947 TGAAGCCGATCACGAAAATATTTTT 58.383 32.000 14.45 0.00 42.66 1.94
36 37 6.745450 TGAAGCCGATCACGAAAATATTTTTC 59.255 34.615 14.45 7.10 42.66 2.29
37 38 6.436843 AGCCGATCACGAAAATATTTTTCT 57.563 33.333 14.45 0.81 42.66 2.52
38 39 6.487103 AGCCGATCACGAAAATATTTTTCTC 58.513 36.000 14.45 1.96 42.66 2.87
39 40 6.316390 AGCCGATCACGAAAATATTTTTCTCT 59.684 34.615 14.45 5.51 42.66 3.10
40 41 6.967199 GCCGATCACGAAAATATTTTTCTCTT 59.033 34.615 14.45 1.43 42.66 2.85
41 42 7.044706 GCCGATCACGAAAATATTTTTCTCTTG 60.045 37.037 14.45 6.68 42.66 3.02
42 43 7.429340 CCGATCACGAAAATATTTTTCTCTTGG 59.571 37.037 14.45 8.24 42.66 3.61
43 44 7.044706 CGATCACGAAAATATTTTTCTCTTGGC 60.045 37.037 14.45 0.00 42.66 4.52
44 45 6.976088 TCACGAAAATATTTTTCTCTTGGCA 58.024 32.000 14.45 0.00 0.00 4.92
45 46 6.861055 TCACGAAAATATTTTTCTCTTGGCAC 59.139 34.615 14.45 0.00 0.00 5.01
46 47 6.640499 CACGAAAATATTTTTCTCTTGGCACA 59.360 34.615 14.45 0.00 0.00 4.57
47 48 6.640907 ACGAAAATATTTTTCTCTTGGCACAC 59.359 34.615 14.45 0.00 39.29 3.82
48 49 6.089417 CGAAAATATTTTTCTCTTGGCACACC 59.911 38.462 14.45 0.00 39.29 4.16
57 58 3.215568 TGGCACACCAAGGCGTTG 61.216 61.111 12.17 12.17 45.37 4.10
58 59 2.904866 GGCACACCAAGGCGTTGA 60.905 61.111 20.29 0.00 35.46 3.18
59 60 2.331451 GCACACCAAGGCGTTGAC 59.669 61.111 20.29 1.21 35.46 3.18
60 61 2.186826 GCACACCAAGGCGTTGACT 61.187 57.895 20.29 2.28 35.46 3.41
61 62 0.882927 GCACACCAAGGCGTTGACTA 60.883 55.000 20.29 0.00 35.46 2.59
62 63 0.865769 CACACCAAGGCGTTGACTAC 59.134 55.000 20.29 0.00 35.46 2.73
63 64 0.250166 ACACCAAGGCGTTGACTACC 60.250 55.000 20.29 0.00 35.46 3.18
64 65 0.250124 CACCAAGGCGTTGACTACCA 60.250 55.000 20.29 0.00 35.46 3.25
65 66 0.470766 ACCAAGGCGTTGACTACCAA 59.529 50.000 20.29 0.00 35.46 3.67
66 67 1.134037 ACCAAGGCGTTGACTACCAAA 60.134 47.619 20.29 0.00 36.36 3.28
67 68 1.265905 CCAAGGCGTTGACTACCAAAC 59.734 52.381 20.29 0.00 36.36 2.93
68 69 2.218603 CAAGGCGTTGACTACCAAACT 58.781 47.619 13.85 0.00 36.36 2.66
69 70 1.878953 AGGCGTTGACTACCAAACTG 58.121 50.000 0.00 0.00 36.36 3.16
70 71 0.237498 GGCGTTGACTACCAAACTGC 59.763 55.000 0.00 0.00 36.36 4.40
71 72 0.941542 GCGTTGACTACCAAACTGCA 59.058 50.000 0.00 0.00 36.36 4.41
72 73 1.069906 GCGTTGACTACCAAACTGCAG 60.070 52.381 13.48 13.48 36.36 4.41
73 74 2.210116 CGTTGACTACCAAACTGCAGT 58.790 47.619 15.25 15.25 36.36 4.40
74 75 2.221055 CGTTGACTACCAAACTGCAGTC 59.779 50.000 21.95 5.62 36.36 3.51
75 76 3.202906 GTTGACTACCAAACTGCAGTCA 58.797 45.455 21.95 8.51 44.17 3.41
76 77 2.833794 TGACTACCAAACTGCAGTCAC 58.166 47.619 21.95 6.26 41.76 3.67
77 78 2.434336 TGACTACCAAACTGCAGTCACT 59.566 45.455 21.95 0.69 41.76 3.41
78 79 3.060602 GACTACCAAACTGCAGTCACTC 58.939 50.000 21.95 4.51 37.84 3.51
79 80 2.700897 ACTACCAAACTGCAGTCACTCT 59.299 45.455 21.95 0.00 0.00 3.24
80 81 1.959042 ACCAAACTGCAGTCACTCTG 58.041 50.000 21.95 12.08 46.12 3.35
88 89 3.384816 CAGTCACTCTGCACAACCA 57.615 52.632 0.00 0.00 37.36 3.67
89 90 0.940126 CAGTCACTCTGCACAACCAC 59.060 55.000 0.00 0.00 37.36 4.16
90 91 0.541392 AGTCACTCTGCACAACCACA 59.459 50.000 0.00 0.00 0.00 4.17
91 92 0.940126 GTCACTCTGCACAACCACAG 59.060 55.000 0.00 0.00 35.15 3.66
92 93 0.179048 TCACTCTGCACAACCACAGG 60.179 55.000 0.00 0.00 34.57 4.00
93 94 1.149174 ACTCTGCACAACCACAGGG 59.851 57.895 0.00 0.00 40.39 4.45
94 95 1.601759 CTCTGCACAACCACAGGGG 60.602 63.158 0.00 0.00 44.81 4.79
132 133 7.678947 ATTTATGCACCTATTCTAGACATGC 57.321 36.000 0.00 0.00 32.85 4.06
133 134 3.475566 TGCACCTATTCTAGACATGCC 57.524 47.619 0.00 0.00 31.89 4.40
134 135 2.771372 TGCACCTATTCTAGACATGCCA 59.229 45.455 0.00 0.00 31.89 4.92
135 136 3.181462 TGCACCTATTCTAGACATGCCAG 60.181 47.826 0.00 0.00 31.89 4.85
136 137 3.070159 GCACCTATTCTAGACATGCCAGA 59.930 47.826 0.00 0.00 0.00 3.86
137 138 4.798924 GCACCTATTCTAGACATGCCAGAG 60.799 50.000 0.00 0.00 0.00 3.35
138 139 3.323403 ACCTATTCTAGACATGCCAGAGC 59.677 47.826 0.00 0.00 40.48 4.09
139 140 2.926778 ATTCTAGACATGCCAGAGCC 57.073 50.000 0.00 0.00 38.69 4.70
140 141 1.871418 TTCTAGACATGCCAGAGCCT 58.129 50.000 0.00 0.00 38.69 4.58
141 142 1.407936 TCTAGACATGCCAGAGCCTC 58.592 55.000 0.00 0.00 38.69 4.70
142 143 0.031857 CTAGACATGCCAGAGCCTCG 59.968 60.000 0.00 0.00 38.69 4.63
143 144 0.395724 TAGACATGCCAGAGCCTCGA 60.396 55.000 0.00 0.00 38.69 4.04
144 145 1.520342 GACATGCCAGAGCCTCGAC 60.520 63.158 0.00 0.00 38.69 4.20
145 146 1.954362 GACATGCCAGAGCCTCGACT 61.954 60.000 0.00 0.00 38.69 4.18
146 147 1.220206 CATGCCAGAGCCTCGACTT 59.780 57.895 0.00 0.00 38.69 3.01
147 148 0.809241 CATGCCAGAGCCTCGACTTC 60.809 60.000 0.00 0.00 38.69 3.01
148 149 1.965754 ATGCCAGAGCCTCGACTTCC 61.966 60.000 0.00 0.00 38.69 3.46
149 150 2.355193 GCCAGAGCCTCGACTTCCT 61.355 63.158 0.00 0.00 0.00 3.36
150 151 1.813192 CCAGAGCCTCGACTTCCTC 59.187 63.158 0.00 0.00 0.00 3.71
151 152 0.682855 CCAGAGCCTCGACTTCCTCT 60.683 60.000 0.00 0.00 35.17 3.69
152 153 0.455410 CAGAGCCTCGACTTCCTCTG 59.545 60.000 10.57 10.57 43.49 3.35
153 154 1.140804 GAGCCTCGACTTCCTCTGC 59.859 63.158 0.00 0.00 0.00 4.26
154 155 1.599606 GAGCCTCGACTTCCTCTGCA 61.600 60.000 0.00 0.00 0.00 4.41
155 156 1.446966 GCCTCGACTTCCTCTGCAC 60.447 63.158 0.00 0.00 0.00 4.57
156 157 1.882989 GCCTCGACTTCCTCTGCACT 61.883 60.000 0.00 0.00 0.00 4.40
157 158 0.605589 CCTCGACTTCCTCTGCACTT 59.394 55.000 0.00 0.00 0.00 3.16
158 159 1.819288 CCTCGACTTCCTCTGCACTTA 59.181 52.381 0.00 0.00 0.00 2.24
159 160 2.416162 CCTCGACTTCCTCTGCACTTAC 60.416 54.545 0.00 0.00 0.00 2.34
160 161 1.199327 TCGACTTCCTCTGCACTTACG 59.801 52.381 0.00 0.00 0.00 3.18
161 162 1.351153 GACTTCCTCTGCACTTACGC 58.649 55.000 0.00 0.00 0.00 4.42
162 163 0.679505 ACTTCCTCTGCACTTACGCA 59.320 50.000 0.00 0.00 40.32 5.24
163 164 1.276421 ACTTCCTCTGCACTTACGCAT 59.724 47.619 0.00 0.00 42.06 4.73
164 165 1.929836 CTTCCTCTGCACTTACGCATC 59.070 52.381 0.00 0.00 42.06 3.91
165 166 1.186200 TCCTCTGCACTTACGCATCT 58.814 50.000 0.00 0.00 42.06 2.90
166 167 1.134995 TCCTCTGCACTTACGCATCTG 60.135 52.381 0.00 0.00 42.06 2.90
167 168 1.404717 CCTCTGCACTTACGCATCTGT 60.405 52.381 0.00 0.00 42.06 3.41
168 169 2.341257 CTCTGCACTTACGCATCTGTT 58.659 47.619 0.00 0.00 42.06 3.16
169 170 3.511699 CTCTGCACTTACGCATCTGTTA 58.488 45.455 0.00 0.00 42.06 2.41
170 171 3.920446 TCTGCACTTACGCATCTGTTAA 58.080 40.909 0.00 0.00 42.06 2.01
171 172 3.678072 TCTGCACTTACGCATCTGTTAAC 59.322 43.478 0.00 0.00 42.06 2.01
172 173 3.659786 TGCACTTACGCATCTGTTAACT 58.340 40.909 7.22 0.00 36.86 2.24
173 174 3.431912 TGCACTTACGCATCTGTTAACTG 59.568 43.478 7.22 6.66 36.86 3.16
174 175 3.678072 GCACTTACGCATCTGTTAACTGA 59.322 43.478 16.35 16.35 0.00 3.41
175 176 4.151689 GCACTTACGCATCTGTTAACTGAA 59.848 41.667 17.70 0.11 0.00 3.02
176 177 5.163854 GCACTTACGCATCTGTTAACTGAAT 60.164 40.000 17.70 7.84 0.00 2.57
177 178 6.470160 CACTTACGCATCTGTTAACTGAATC 58.530 40.000 17.70 11.64 0.00 2.52
178 179 5.581085 ACTTACGCATCTGTTAACTGAATCC 59.419 40.000 17.70 9.02 0.00 3.01
179 180 3.937814 ACGCATCTGTTAACTGAATCCA 58.062 40.909 17.70 0.00 0.00 3.41
180 181 4.323417 ACGCATCTGTTAACTGAATCCAA 58.677 39.130 17.70 0.00 0.00 3.53
181 182 4.393062 ACGCATCTGTTAACTGAATCCAAG 59.607 41.667 17.70 9.59 0.00 3.61
182 183 4.666237 GCATCTGTTAACTGAATCCAAGC 58.334 43.478 17.70 11.49 0.00 4.01
183 184 4.156556 GCATCTGTTAACTGAATCCAAGCA 59.843 41.667 17.70 0.00 0.00 3.91
184 185 5.675575 GCATCTGTTAACTGAATCCAAGCAG 60.676 44.000 17.70 0.00 38.10 4.24
185 186 5.227569 TCTGTTAACTGAATCCAAGCAGA 57.772 39.130 12.28 0.00 36.07 4.26
186 187 5.620206 TCTGTTAACTGAATCCAAGCAGAA 58.380 37.500 12.28 0.00 36.07 3.02
187 188 6.061441 TCTGTTAACTGAATCCAAGCAGAAA 58.939 36.000 12.28 0.00 36.07 2.52
188 189 6.545666 TCTGTTAACTGAATCCAAGCAGAAAA 59.454 34.615 12.28 0.00 36.07 2.29
189 190 7.068103 TCTGTTAACTGAATCCAAGCAGAAAAA 59.932 33.333 12.28 0.00 36.07 1.94
190 191 7.202526 TGTTAACTGAATCCAAGCAGAAAAAG 58.797 34.615 7.22 0.00 36.07 2.27
191 192 4.861102 ACTGAATCCAAGCAGAAAAAGG 57.139 40.909 0.00 0.00 36.07 3.11
192 193 4.218312 ACTGAATCCAAGCAGAAAAAGGT 58.782 39.130 0.00 0.00 36.07 3.50
193 194 4.038402 ACTGAATCCAAGCAGAAAAAGGTG 59.962 41.667 0.00 0.00 36.07 4.00
194 195 3.243839 TGAATCCAAGCAGAAAAAGGTGC 60.244 43.478 0.00 0.00 40.17 5.01
195 196 1.774110 TCCAAGCAGAAAAAGGTGCA 58.226 45.000 0.00 0.00 42.47 4.57
196 197 1.682854 TCCAAGCAGAAAAAGGTGCAG 59.317 47.619 0.00 0.00 42.47 4.41
197 198 1.410153 CCAAGCAGAAAAAGGTGCAGT 59.590 47.619 0.00 0.00 42.47 4.40
198 199 2.159057 CCAAGCAGAAAAAGGTGCAGTT 60.159 45.455 0.00 0.00 42.47 3.16
199 200 3.524541 CAAGCAGAAAAAGGTGCAGTTT 58.475 40.909 0.00 0.00 42.47 2.66
200 201 3.893326 AGCAGAAAAAGGTGCAGTTTT 57.107 38.095 0.00 0.00 42.47 2.43
201 202 3.785486 AGCAGAAAAAGGTGCAGTTTTC 58.215 40.909 16.81 16.81 42.47 2.29
205 206 5.659440 AGAAAAAGGTGCAGTTTTCTGAA 57.341 34.783 22.54 0.00 46.94 3.02
217 218 5.830000 AGTTTTCTGAACCCAAGTTACAC 57.170 39.130 0.00 0.00 35.94 2.90
218 219 4.643334 AGTTTTCTGAACCCAAGTTACACC 59.357 41.667 0.00 0.00 35.94 4.16
219 220 4.513406 TTTCTGAACCCAAGTTACACCT 57.487 40.909 0.00 0.00 35.94 4.00
220 221 4.513406 TTCTGAACCCAAGTTACACCTT 57.487 40.909 0.00 0.00 35.94 3.50
221 222 3.815809 TCTGAACCCAAGTTACACCTTG 58.184 45.455 0.00 0.00 41.21 3.61
222 223 2.293399 CTGAACCCAAGTTACACCTTGC 59.707 50.000 0.00 0.00 40.40 4.01
223 224 2.092103 TGAACCCAAGTTACACCTTGCT 60.092 45.455 0.00 0.00 40.40 3.91
224 225 3.136809 TGAACCCAAGTTACACCTTGCTA 59.863 43.478 0.00 0.00 40.40 3.49
225 226 3.868619 ACCCAAGTTACACCTTGCTAA 57.131 42.857 0.00 0.00 40.40 3.09
226 227 4.173290 ACCCAAGTTACACCTTGCTAAA 57.827 40.909 0.00 0.00 40.40 1.85
227 228 4.538738 ACCCAAGTTACACCTTGCTAAAA 58.461 39.130 0.00 0.00 40.40 1.52
228 229 4.957327 ACCCAAGTTACACCTTGCTAAAAA 59.043 37.500 0.00 0.00 40.40 1.94
257 258 5.276461 AGTTTTCTGAACCAAATTCCACC 57.724 39.130 0.00 0.00 36.36 4.61
258 259 4.962362 AGTTTTCTGAACCAAATTCCACCT 59.038 37.500 0.00 0.00 36.36 4.00
259 260 6.133356 AGTTTTCTGAACCAAATTCCACCTA 58.867 36.000 0.00 0.00 36.36 3.08
260 261 6.609616 AGTTTTCTGAACCAAATTCCACCTAA 59.390 34.615 0.00 0.00 36.36 2.69
261 262 7.290014 AGTTTTCTGAACCAAATTCCACCTAAT 59.710 33.333 0.00 0.00 36.36 1.73
262 263 7.610580 TTTCTGAACCAAATTCCACCTAATT 57.389 32.000 0.00 0.00 36.36 1.40
263 264 8.713708 TTTCTGAACCAAATTCCACCTAATTA 57.286 30.769 0.00 0.00 36.36 1.40
264 265 8.713708 TTCTGAACCAAATTCCACCTAATTAA 57.286 30.769 0.00 0.00 36.36 1.40
265 266 8.713708 TCTGAACCAAATTCCACCTAATTAAA 57.286 30.769 0.00 0.00 36.36 1.52
266 267 8.802267 TCTGAACCAAATTCCACCTAATTAAAG 58.198 33.333 0.00 0.00 36.36 1.85
267 268 8.485578 TGAACCAAATTCCACCTAATTAAAGT 57.514 30.769 0.00 0.00 36.36 2.66
268 269 8.581578 TGAACCAAATTCCACCTAATTAAAGTC 58.418 33.333 0.00 0.00 36.36 3.01
269 270 7.153217 ACCAAATTCCACCTAATTAAAGTCG 57.847 36.000 0.00 0.00 0.00 4.18
404 405 7.384115 TCAACAACTCTACCTATTTGTTTCTCG 59.616 37.037 0.00 0.00 39.56 4.04
556 561 6.365520 AGTCCTTCTTTGTCATACTTGGTTT 58.634 36.000 0.00 0.00 0.00 3.27
599 605 8.461222 TGCATTTTAACCTGAGATGTTCTTATG 58.539 33.333 0.00 0.00 0.00 1.90
635 646 2.227388 GCATGGTCAGTTCTTTGGTCTG 59.773 50.000 0.00 0.00 0.00 3.51
647 658 5.097742 TCTTTGGTCTGACTTGTTCTTGA 57.902 39.130 7.85 0.00 0.00 3.02
657 668 6.535150 TCTGACTTGTTCTTGACACTTAACAG 59.465 38.462 0.00 0.00 38.18 3.16
791 821 9.903185 GAGAAGTTAACAATACGAAATAAGAGC 57.097 33.333 8.61 0.00 0.00 4.09
815 849 9.755122 AGCCTAGGAGTTTACTATTTTGATTTT 57.245 29.630 14.75 0.00 0.00 1.82
1116 2797 2.029020 TGGCACACAACTACTAGAGCTG 60.029 50.000 0.00 0.00 0.00 4.24
1135 2816 4.101448 AGAGCACCATGGGCCGTC 62.101 66.667 18.09 10.85 0.00 4.79
2001 3694 4.709886 ACCATAACAATGGAAGCTTTACCC 59.290 41.667 11.28 0.00 44.39 3.69
2578 4272 0.250510 TGCTTATGGTGGTGAACGCA 60.251 50.000 0.00 0.00 0.00 5.24
2833 4566 2.741985 GCCATTTGGGTTTGCGCC 60.742 61.111 4.18 0.00 39.65 6.53
2961 4694 3.726607 ACTGAAGAAGCTCAGACACTTG 58.273 45.455 7.62 0.00 44.82 3.16
3009 4742 3.878778 AGGGAGAGATTTTGAATGTCGG 58.121 45.455 0.00 0.00 0.00 4.79
3092 4825 4.142609 TGGAAATACAGGATGAGTCTGC 57.857 45.455 0.00 0.00 39.69 4.26
3149 4882 5.415701 GCTTGAGGTTATTGAATGTGAAGGA 59.584 40.000 0.00 0.00 0.00 3.36
3217 4950 5.762179 TCTGTCCAACCTAGATGTGAATT 57.238 39.130 0.00 0.00 0.00 2.17
3348 5081 2.123982 GCTGATGGGGGCCAGAAG 60.124 66.667 4.39 0.00 36.75 2.85
3376 5109 8.274322 TGTATTCATTGGTTCTATCTTGGTCAT 58.726 33.333 0.00 0.00 0.00 3.06
3417 5150 1.679032 CCATCCCTTTCTCGGTTGTCC 60.679 57.143 0.00 0.00 0.00 4.02
3427 5160 0.531090 TCGGTTGTCCAACTTGACGG 60.531 55.000 9.79 0.00 40.94 4.79
3429 5162 1.226746 GGTTGTCCAACTTGACGGAG 58.773 55.000 9.79 0.00 40.94 4.63
3571 5304 4.559063 CCATGGCGAGCCTGGAGG 62.559 72.222 20.55 11.66 36.89 4.30
3705 5438 1.394917 CTGCGCCAGTGTTCTACAATC 59.605 52.381 4.18 0.00 0.00 2.67
3711 5444 3.559171 GCCAGTGTTCTACAATCCAAGGA 60.559 47.826 0.00 0.00 0.00 3.36
3712 5445 4.256920 CCAGTGTTCTACAATCCAAGGAG 58.743 47.826 0.00 0.00 0.00 3.69
3713 5446 4.256920 CAGTGTTCTACAATCCAAGGAGG 58.743 47.826 0.00 0.00 39.47 4.30
3717 5450 5.130477 GTGTTCTACAATCCAAGGAGGGATA 59.870 44.000 0.00 0.00 46.96 2.59
3718 5451 5.130477 TGTTCTACAATCCAAGGAGGGATAC 59.870 44.000 0.00 0.00 46.96 2.24
3719 5452 5.157770 TCTACAATCCAAGGAGGGATACT 57.842 43.478 0.00 0.00 46.96 2.12
3720 5453 5.148502 TCTACAATCCAAGGAGGGATACTC 58.851 45.833 0.00 0.00 46.96 2.59
3721 5454 4.014273 ACAATCCAAGGAGGGATACTCT 57.986 45.455 0.00 0.00 46.96 3.24
3722 5455 3.970640 ACAATCCAAGGAGGGATACTCTC 59.029 47.826 0.00 0.00 46.96 3.20
3723 5456 3.969976 CAATCCAAGGAGGGATACTCTCA 59.030 47.826 0.00 0.00 46.96 3.27
3724 5457 3.033659 TCCAAGGAGGGATACTCTCAC 57.966 52.381 0.00 0.00 45.83 3.51
3725 5458 1.683917 CCAAGGAGGGATACTCTCACG 59.316 57.143 0.00 0.00 45.83 4.35
3728 5461 1.465200 GGAGGGATACTCTCACGGGC 61.465 65.000 0.00 0.00 45.83 6.13
3782 5523 3.346315 TGGTCAGGAAATGTGCATGTAG 58.654 45.455 0.00 0.00 0.00 2.74
3793 5535 2.765699 TGTGCATGTAGGTGAGCTATCA 59.234 45.455 0.00 0.00 0.00 2.15
3838 5587 3.181423 ACCATTACTTGCTTTCTTCCCCA 60.181 43.478 0.00 0.00 0.00 4.96
3896 5664 2.235016 GGTGTTGGTTATGCAGGTCAA 58.765 47.619 0.00 0.00 0.00 3.18
3905 5678 4.273318 GTTATGCAGGTCAAGGAAGGAAT 58.727 43.478 0.00 0.00 0.00 3.01
3932 5705 1.197036 GCTTCACCAACGAGTTAAGGC 59.803 52.381 0.00 0.00 0.00 4.35
3933 5706 1.459592 CTTCACCAACGAGTTAAGGCG 59.540 52.381 0.00 0.00 0.00 5.52
3934 5707 0.320073 TCACCAACGAGTTAAGGCGG 60.320 55.000 0.00 0.00 0.00 6.13
3936 5709 2.396157 CCAACGAGTTAAGGCGGCC 61.396 63.158 12.11 12.11 0.00 6.13
3937 5710 1.375523 CAACGAGTTAAGGCGGCCT 60.376 57.895 17.69 17.69 33.87 5.19
3940 5713 2.106683 CGAGTTAAGGCGGCCTTGG 61.107 63.158 37.81 20.18 44.44 3.61
3942 5715 0.107165 GAGTTAAGGCGGCCTTGGAT 60.107 55.000 37.81 24.72 44.44 3.41
3944 5717 0.107165 GTTAAGGCGGCCTTGGATCT 60.107 55.000 37.81 18.11 44.44 2.75
3947 5720 2.514824 GGCGGCCTTGGATCTCAC 60.515 66.667 12.87 0.00 0.00 3.51
3949 5722 1.522580 GCGGCCTTGGATCTCACTC 60.523 63.158 0.00 0.00 0.00 3.51
3950 5723 1.900351 CGGCCTTGGATCTCACTCA 59.100 57.895 0.00 0.00 0.00 3.41
3951 5724 0.250234 CGGCCTTGGATCTCACTCAA 59.750 55.000 0.00 0.00 0.00 3.02
3960 5734 2.419713 GGATCTCACTCAATGCTGCTGA 60.420 50.000 0.00 0.00 0.00 4.26
3967 5741 1.332065 CTCAATGCTGCTGATCTGCTG 59.668 52.381 23.02 22.44 39.95 4.41
3971 5745 0.609662 TGCTGCTGATCTGCTGTACA 59.390 50.000 25.05 16.22 39.95 2.90
3993 5769 0.955919 CCGGGTTTCCTCTGCTGTTC 60.956 60.000 0.00 0.00 0.00 3.18
3995 5771 0.955919 GGGTTTCCTCTGCTGTTCCG 60.956 60.000 0.00 0.00 0.00 4.30
4002 5778 1.363744 CTCTGCTGTTCCGGAATGTC 58.636 55.000 22.04 12.38 0.00 3.06
4004 5780 0.321564 CTGCTGTTCCGGAATGTCCA 60.322 55.000 22.04 12.55 35.91 4.02
4006 5782 0.521735 GCTGTTCCGGAATGTCCAAC 59.478 55.000 22.04 6.71 35.91 3.77
4007 5783 1.165270 CTGTTCCGGAATGTCCAACC 58.835 55.000 22.04 5.12 35.91 3.77
4009 5785 0.604511 GTTCCGGAATGTCCAACCGT 60.605 55.000 22.04 0.00 44.34 4.83
4010 5786 0.604243 TTCCGGAATGTCCAACCGTG 60.604 55.000 14.35 0.00 44.34 4.94
4016 5792 0.949105 AATGTCCAACCGTGCGTCTC 60.949 55.000 0.00 0.00 0.00 3.36
4019 5795 3.041940 CCAACCGTGCGTCTCCAC 61.042 66.667 0.00 0.00 0.00 4.02
4021 5797 3.542676 AACCGTGCGTCTCCACCA 61.543 61.111 0.00 0.00 32.10 4.17
4022 5798 3.096633 AACCGTGCGTCTCCACCAA 62.097 57.895 0.00 0.00 32.10 3.67
4026 5802 1.227999 CGTGCGTCTCCACCAATTGT 61.228 55.000 4.43 0.00 32.10 2.71
4027 5803 0.951558 GTGCGTCTCCACCAATTGTT 59.048 50.000 4.43 0.00 0.00 2.83
4028 5804 0.950836 TGCGTCTCCACCAATTGTTG 59.049 50.000 4.43 0.00 0.00 3.33
4029 5805 0.387239 GCGTCTCCACCAATTGTTGC 60.387 55.000 4.43 0.00 0.00 4.17
4030 5806 1.238439 CGTCTCCACCAATTGTTGCT 58.762 50.000 4.43 0.00 0.00 3.91
4031 5807 2.422597 CGTCTCCACCAATTGTTGCTA 58.577 47.619 4.43 0.00 0.00 3.49
4032 5808 2.159627 CGTCTCCACCAATTGTTGCTAC 59.840 50.000 4.43 0.00 0.00 3.58
4033 5809 2.488153 GTCTCCACCAATTGTTGCTACC 59.512 50.000 4.43 0.00 0.00 3.18
4034 5810 2.375174 TCTCCACCAATTGTTGCTACCT 59.625 45.455 4.43 0.00 0.00 3.08
4035 5811 2.749621 CTCCACCAATTGTTGCTACCTC 59.250 50.000 4.43 0.00 0.00 3.85
4036 5812 1.818674 CCACCAATTGTTGCTACCTCC 59.181 52.381 4.43 0.00 0.00 4.30
4037 5813 2.513753 CACCAATTGTTGCTACCTCCA 58.486 47.619 4.43 0.00 0.00 3.86
4038 5814 2.228822 CACCAATTGTTGCTACCTCCAC 59.771 50.000 4.43 0.00 0.00 4.02
4039 5815 2.108250 ACCAATTGTTGCTACCTCCACT 59.892 45.455 4.43 0.00 0.00 4.00
4040 5816 3.329520 ACCAATTGTTGCTACCTCCACTA 59.670 43.478 4.43 0.00 0.00 2.74
4041 5817 3.689649 CCAATTGTTGCTACCTCCACTAC 59.310 47.826 4.43 0.00 0.00 2.73
4042 5818 4.323417 CAATTGTTGCTACCTCCACTACA 58.677 43.478 0.00 0.00 0.00 2.74
4043 5819 3.678056 TTGTTGCTACCTCCACTACAG 57.322 47.619 0.00 0.00 0.00 2.74
4044 5820 2.605257 TGTTGCTACCTCCACTACAGT 58.395 47.619 0.00 0.00 0.00 3.55
4045 5821 2.299013 TGTTGCTACCTCCACTACAGTG 59.701 50.000 2.23 2.23 45.23 3.66
4046 5822 0.895530 TGCTACCTCCACTACAGTGC 59.104 55.000 3.75 0.00 44.34 4.40
4047 5823 1.187087 GCTACCTCCACTACAGTGCT 58.813 55.000 3.75 0.00 44.34 4.40
4048 5824 1.550976 GCTACCTCCACTACAGTGCTT 59.449 52.381 3.75 0.00 44.34 3.91
4049 5825 2.417515 GCTACCTCCACTACAGTGCTTC 60.418 54.545 3.75 0.00 44.34 3.86
4050 5826 1.717032 ACCTCCACTACAGTGCTTCA 58.283 50.000 3.75 0.00 44.34 3.02
4051 5827 1.344763 ACCTCCACTACAGTGCTTCAC 59.655 52.381 3.75 0.00 44.34 3.18
4052 5828 1.620819 CCTCCACTACAGTGCTTCACT 59.379 52.381 3.75 0.00 46.51 3.41
4053 5829 2.037772 CCTCCACTACAGTGCTTCACTT 59.962 50.000 3.75 0.00 42.59 3.16
4062 5838 3.574396 ACAGTGCTTCACTTCTGCTACTA 59.426 43.478 0.00 0.00 42.59 1.82
4065 5841 3.923461 GTGCTTCACTTCTGCTACTACTG 59.077 47.826 0.00 0.00 0.00 2.74
4072 5848 2.437085 TCTGCTACTACTGCTGCCTA 57.563 50.000 0.00 0.00 0.00 3.93
4074 5850 2.028130 CTGCTACTACTGCTGCCTACT 58.972 52.381 0.00 0.00 0.00 2.57
4075 5851 1.751351 TGCTACTACTGCTGCCTACTG 59.249 52.381 0.00 0.00 0.00 2.74
4076 5852 1.537135 GCTACTACTGCTGCCTACTGC 60.537 57.143 0.00 0.00 40.88 4.40
4078 5854 0.534412 ACTACTGCTGCCTACTGCTG 59.466 55.000 0.00 0.00 42.74 4.41
4084 5860 2.206635 CTGCCTACTGCTGCTAGGT 58.793 57.895 14.31 7.51 42.00 3.08
4085 5861 0.539051 CTGCCTACTGCTGCTAGGTT 59.461 55.000 14.31 0.00 42.00 3.50
4086 5862 0.537188 TGCCTACTGCTGCTAGGTTC 59.463 55.000 14.31 2.51 42.00 3.62
4087 5863 0.528684 GCCTACTGCTGCTAGGTTCG 60.529 60.000 14.31 1.71 34.26 3.95
4088 5864 0.818296 CCTACTGCTGCTAGGTTCGT 59.182 55.000 0.00 0.00 0.00 3.85
4089 5865 1.469940 CCTACTGCTGCTAGGTTCGTG 60.470 57.143 0.00 0.00 0.00 4.35
4090 5866 0.108804 TACTGCTGCTAGGTTCGTGC 60.109 55.000 0.00 0.00 0.00 5.34
4091 5867 2.047274 TGCTGCTAGGTTCGTGCC 60.047 61.111 0.00 0.00 0.00 5.01
4092 5868 2.047274 GCTGCTAGGTTCGTGCCA 60.047 61.111 0.00 0.00 0.00 4.92
4094 5870 1.026718 GCTGCTAGGTTCGTGCCATT 61.027 55.000 0.00 0.00 0.00 3.16
4103 5887 1.265635 GTTCGTGCCATTGTGTGCTTA 59.734 47.619 0.00 0.00 0.00 3.09
4104 5888 1.819928 TCGTGCCATTGTGTGCTTAT 58.180 45.000 0.00 0.00 0.00 1.73
4107 5891 2.097954 CGTGCCATTGTGTGCTTATCAT 59.902 45.455 0.00 0.00 0.00 2.45
4112 5896 4.327898 GCCATTGTGTGCTTATCATTTGTG 59.672 41.667 0.00 0.00 0.00 3.33
4115 5899 7.482474 CCATTGTGTGCTTATCATTTGTGATA 58.518 34.615 0.00 0.00 0.00 2.15
4124 5908 8.773645 TGCTTATCATTTGTGATAATAAGACGG 58.226 33.333 10.32 1.10 39.26 4.79
4125 5909 7.746475 GCTTATCATTTGTGATAATAAGACGGC 59.254 37.037 10.32 6.13 39.26 5.68
4131 5915 8.559536 CATTTGTGATAATAAGACGGCACTTAT 58.440 33.333 0.00 7.74 42.54 1.73
4137 5921 2.279582 AAGACGGCACTTATCGTGAG 57.720 50.000 0.00 0.00 46.81 3.51
4138 5922 1.460504 AGACGGCACTTATCGTGAGA 58.539 50.000 0.00 0.00 46.81 3.27
4139 5923 1.132643 AGACGGCACTTATCGTGAGAC 59.867 52.381 0.00 0.00 46.81 3.36
4140 5924 1.132643 GACGGCACTTATCGTGAGACT 59.867 52.381 0.00 0.00 46.81 3.24
4145 5929 3.175152 GCACTTATCGTGAGACTGACTG 58.825 50.000 0.00 0.00 46.81 3.51
4150 5934 1.799519 CGTGAGACTGACTGCGAGC 60.800 63.158 0.00 0.00 0.00 5.03
4151 5935 1.287191 GTGAGACTGACTGCGAGCA 59.713 57.895 0.00 0.00 0.00 4.26
4152 5936 0.319040 GTGAGACTGACTGCGAGCAA 60.319 55.000 0.00 0.00 0.00 3.91
4153 5937 0.605083 TGAGACTGACTGCGAGCAAT 59.395 50.000 0.00 0.00 0.00 3.56
4156 5940 3.254060 GAGACTGACTGCGAGCAATTTA 58.746 45.455 0.00 0.00 0.00 1.40
4165 5949 3.832276 TGCGAGCAATTTATGTTTCCAC 58.168 40.909 0.00 0.00 0.00 4.02
4171 5955 6.585702 CGAGCAATTTATGTTTCCACATTCAA 59.414 34.615 0.00 0.00 41.16 2.69
4174 5958 7.933033 AGCAATTTATGTTTCCACATTCAAACT 59.067 29.630 0.00 0.00 41.16 2.66
4182 5966 8.282455 TGTTTCCACATTCAAACTACTTTACA 57.718 30.769 0.00 0.00 34.22 2.41
4183 5967 8.908903 TGTTTCCACATTCAAACTACTTTACAT 58.091 29.630 0.00 0.00 34.22 2.29
4206 5990 3.471680 TGTACTGCTATTTGTGTGTGCA 58.528 40.909 0.00 0.00 0.00 4.57
4215 5999 7.249858 TGCTATTTGTGTGTGCATATTGTAAG 58.750 34.615 0.00 0.00 0.00 2.34
4216 6000 7.120432 TGCTATTTGTGTGTGCATATTGTAAGA 59.880 33.333 0.00 0.00 0.00 2.10
4217 6001 7.429340 GCTATTTGTGTGTGCATATTGTAAGAC 59.571 37.037 0.00 0.00 0.00 3.01
4252 6045 6.750039 TCGTGTTTCCATTTTCAGACTTTTTC 59.250 34.615 0.00 0.00 0.00 2.29
4253 6046 6.291060 CGTGTTTCCATTTTCAGACTTTTTCG 60.291 38.462 0.00 0.00 0.00 3.46
4254 6047 5.518487 TGTTTCCATTTTCAGACTTTTTCGC 59.482 36.000 0.00 0.00 0.00 4.70
4255 6048 3.884169 TCCATTTTCAGACTTTTTCGCG 58.116 40.909 0.00 0.00 0.00 5.87
4256 6049 3.314080 TCCATTTTCAGACTTTTTCGCGT 59.686 39.130 5.77 0.00 0.00 6.01
4257 6050 3.421888 CCATTTTCAGACTTTTTCGCGTG 59.578 43.478 5.77 0.00 0.00 5.34
4258 6051 3.750639 TTTTCAGACTTTTTCGCGTGT 57.249 38.095 5.77 0.00 0.00 4.49
4259 6052 2.730183 TTCAGACTTTTTCGCGTGTG 57.270 45.000 5.77 0.00 0.00 3.82
4260 6053 0.303493 TCAGACTTTTTCGCGTGTGC 59.697 50.000 5.77 0.00 37.91 4.57
4261 6054 0.304705 CAGACTTTTTCGCGTGTGCT 59.695 50.000 5.77 0.00 39.65 4.40
4262 6055 1.525197 CAGACTTTTTCGCGTGTGCTA 59.475 47.619 5.77 0.00 39.65 3.49
4263 6056 1.792949 AGACTTTTTCGCGTGTGCTAG 59.207 47.619 5.77 0.03 39.65 3.42
4264 6057 1.525619 GACTTTTTCGCGTGTGCTAGT 59.474 47.619 5.77 3.51 39.65 2.57
4265 6058 1.937899 ACTTTTTCGCGTGTGCTAGTT 59.062 42.857 5.77 0.00 39.65 2.24
4266 6059 2.286184 ACTTTTTCGCGTGTGCTAGTTG 60.286 45.455 5.77 0.00 39.65 3.16
4267 6060 0.584396 TTTTCGCGTGTGCTAGTTGG 59.416 50.000 5.77 0.00 39.65 3.77
4268 6061 1.225376 TTTCGCGTGTGCTAGTTGGG 61.225 55.000 5.77 0.00 39.65 4.12
4269 6062 2.048597 CGCGTGTGCTAGTTGGGA 60.049 61.111 0.00 0.00 39.65 4.37
4270 6063 1.666553 CGCGTGTGCTAGTTGGGAA 60.667 57.895 0.00 0.00 39.65 3.97
4271 6064 1.866925 GCGTGTGCTAGTTGGGAAC 59.133 57.895 0.00 0.00 38.39 3.62
4272 6065 0.882927 GCGTGTGCTAGTTGGGAACA 60.883 55.000 0.00 0.00 38.39 3.18
4273 6066 2.410887 GCGTGTGCTAGTTGGGAACAA 61.411 52.381 0.00 0.00 43.14 2.83
4274 6067 3.705078 GCGTGTGCTAGTTGGGAACAAT 61.705 50.000 0.00 0.00 45.53 2.71
4275 6068 5.737184 GCGTGTGCTAGTTGGGAACAATG 62.737 52.174 0.00 0.00 45.53 2.82
4286 6079 3.466836 TGGGAACAATGTATGATCTCGC 58.533 45.455 0.00 0.00 34.15 5.03
4287 6080 3.118445 TGGGAACAATGTATGATCTCGCA 60.118 43.478 0.00 0.00 34.15 5.10
4288 6081 4.067896 GGGAACAATGTATGATCTCGCAT 58.932 43.478 0.00 0.00 31.83 4.73
4289 6082 5.221621 TGGGAACAATGTATGATCTCGCATA 60.222 40.000 0.00 0.00 34.15 3.14
4290 6083 5.877012 GGGAACAATGTATGATCTCGCATAT 59.123 40.000 0.00 0.00 33.67 1.78
4291 6084 6.372659 GGGAACAATGTATGATCTCGCATATT 59.627 38.462 0.00 0.00 33.67 1.28
4292 6085 7.094634 GGGAACAATGTATGATCTCGCATATTT 60.095 37.037 0.00 0.00 33.67 1.40
4293 6086 7.959651 GGAACAATGTATGATCTCGCATATTTC 59.040 37.037 0.00 2.75 33.67 2.17
4294 6087 7.967890 ACAATGTATGATCTCGCATATTTCA 57.032 32.000 0.00 0.00 33.67 2.69
4295 6088 8.382030 ACAATGTATGATCTCGCATATTTCAA 57.618 30.769 0.00 0.00 33.67 2.69
4296 6089 9.006839 ACAATGTATGATCTCGCATATTTCAAT 57.993 29.630 0.00 0.00 33.67 2.57
4297 6090 9.836076 CAATGTATGATCTCGCATATTTCAATT 57.164 29.630 0.00 0.00 33.67 2.32
4298 6091 9.836076 AATGTATGATCTCGCATATTTCAATTG 57.164 29.630 0.00 0.00 33.67 2.32
4299 6092 8.382030 TGTATGATCTCGCATATTTCAATTGT 57.618 30.769 5.13 0.00 33.67 2.71
4300 6093 8.284693 TGTATGATCTCGCATATTTCAATTGTG 58.715 33.333 5.13 0.00 33.67 3.33
4301 6094 6.063640 TGATCTCGCATATTTCAATTGTGG 57.936 37.500 5.13 0.00 0.00 4.17
4302 6095 4.291540 TCTCGCATATTTCAATTGTGGC 57.708 40.909 5.13 1.22 0.00 5.01
4303 6096 3.947196 TCTCGCATATTTCAATTGTGGCT 59.053 39.130 5.13 0.00 0.00 4.75
4304 6097 4.031418 TCGCATATTTCAATTGTGGCTG 57.969 40.909 5.13 0.09 0.00 4.85
4305 6098 3.443329 TCGCATATTTCAATTGTGGCTGT 59.557 39.130 5.13 0.00 0.00 4.40
4306 6099 4.082300 TCGCATATTTCAATTGTGGCTGTT 60.082 37.500 5.13 0.00 0.00 3.16
4307 6100 5.124617 TCGCATATTTCAATTGTGGCTGTTA 59.875 36.000 5.13 0.00 0.00 2.41
4308 6101 5.804473 CGCATATTTCAATTGTGGCTGTTAA 59.196 36.000 5.13 0.00 0.00 2.01
4309 6102 6.309980 CGCATATTTCAATTGTGGCTGTTAAA 59.690 34.615 5.13 0.00 0.00 1.52
4310 6103 7.455447 GCATATTTCAATTGTGGCTGTTAAAC 58.545 34.615 5.13 0.00 0.00 2.01
4311 6104 7.665471 CATATTTCAATTGTGGCTGTTAAACG 58.335 34.615 5.13 0.00 0.00 3.60
4312 6105 4.902443 TTCAATTGTGGCTGTTAAACGA 57.098 36.364 5.13 0.00 0.00 3.85
4313 6106 4.902443 TCAATTGTGGCTGTTAAACGAA 57.098 36.364 5.13 0.00 0.00 3.85
4314 6107 5.250235 TCAATTGTGGCTGTTAAACGAAA 57.750 34.783 5.13 0.00 0.00 3.46
4315 6108 5.277825 TCAATTGTGGCTGTTAAACGAAAG 58.722 37.500 5.13 0.00 0.00 2.62
4337 6130 9.813080 GAAAGTATCGGCTTGTGATTTATAATC 57.187 33.333 0.00 0.00 0.00 1.75
4338 6131 7.907214 AGTATCGGCTTGTGATTTATAATCC 57.093 36.000 0.00 0.00 0.00 3.01
4339 6132 7.680730 AGTATCGGCTTGTGATTTATAATCCT 58.319 34.615 0.00 0.00 0.00 3.24
4340 6133 7.819900 AGTATCGGCTTGTGATTTATAATCCTC 59.180 37.037 0.00 0.00 0.00 3.71
4341 6134 5.924356 TCGGCTTGTGATTTATAATCCTCA 58.076 37.500 0.00 0.00 0.00 3.86
4342 6135 5.991606 TCGGCTTGTGATTTATAATCCTCAG 59.008 40.000 0.00 0.00 0.00 3.35
4343 6136 5.991606 CGGCTTGTGATTTATAATCCTCAGA 59.008 40.000 0.00 0.00 0.00 3.27
4344 6137 6.652481 CGGCTTGTGATTTATAATCCTCAGAT 59.348 38.462 0.00 0.00 0.00 2.90
4345 6138 7.819415 CGGCTTGTGATTTATAATCCTCAGATA 59.181 37.037 0.00 0.00 30.42 1.98
4346 6139 9.678260 GGCTTGTGATTTATAATCCTCAGATAT 57.322 33.333 0.00 0.00 30.42 1.63
4359 6152 8.724113 AATCCTCAGATATTCATCTTGAGAGA 57.276 34.615 12.01 9.36 39.62 3.10
4360 6153 8.724113 ATCCTCAGATATTCATCTTGAGAGAA 57.276 34.615 12.01 0.00 39.62 2.87
4361 6154 8.724113 TCCTCAGATATTCATCTTGAGAGAAT 57.276 34.615 12.01 0.00 39.62 2.40
4362 6155 9.156940 TCCTCAGATATTCATCTTGAGAGAATT 57.843 33.333 12.01 0.00 39.62 2.17
4363 6156 9.210329 CCTCAGATATTCATCTTGAGAGAATTG 57.790 37.037 12.01 5.08 39.62 2.32
4364 6157 9.210329 CTCAGATATTCATCTTGAGAGAATTGG 57.790 37.037 9.41 0.00 39.62 3.16
4365 6158 7.660617 TCAGATATTCATCTTGAGAGAATTGGC 59.339 37.037 9.41 0.00 39.62 4.52
4366 6159 7.662258 CAGATATTCATCTTGAGAGAATTGGCT 59.338 37.037 9.41 0.00 39.62 4.75
4367 6160 8.219178 AGATATTCATCTTGAGAGAATTGGCTT 58.781 33.333 9.41 0.00 38.41 4.35
4368 6161 5.892160 TTCATCTTGAGAGAATTGGCTTG 57.108 39.130 0.00 0.00 35.07 4.01
4369 6162 4.914983 TCATCTTGAGAGAATTGGCTTGT 58.085 39.130 0.00 0.00 35.07 3.16
4370 6163 4.698780 TCATCTTGAGAGAATTGGCTTGTG 59.301 41.667 0.00 0.00 35.07 3.33
4371 6164 4.356405 TCTTGAGAGAATTGGCTTGTGA 57.644 40.909 0.00 0.00 0.00 3.58
4372 6165 4.914983 TCTTGAGAGAATTGGCTTGTGAT 58.085 39.130 0.00 0.00 0.00 3.06
4373 6166 5.319453 TCTTGAGAGAATTGGCTTGTGATT 58.681 37.500 0.00 0.00 0.00 2.57
4374 6167 5.413833 TCTTGAGAGAATTGGCTTGTGATTC 59.586 40.000 0.00 0.00 0.00 2.52
4375 6168 4.654915 TGAGAGAATTGGCTTGTGATTCA 58.345 39.130 0.00 0.00 33.34 2.57
4376 6169 5.072055 TGAGAGAATTGGCTTGTGATTCAA 58.928 37.500 0.00 0.00 33.34 2.69
4377 6170 5.713389 TGAGAGAATTGGCTTGTGATTCAAT 59.287 36.000 0.00 0.00 35.35 2.57
4378 6171 6.885918 TGAGAGAATTGGCTTGTGATTCAATA 59.114 34.615 0.00 0.00 35.35 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.447724 TCGTGATCGGCTTCATTATAAAGC 59.552 41.667 0.00 0.00 46.66 3.51
3 4 6.525121 TTCGTGATCGGCTTCATTATAAAG 57.475 37.500 0.00 0.00 37.69 1.85
4 5 6.912203 TTTCGTGATCGGCTTCATTATAAA 57.088 33.333 0.00 0.00 37.69 1.40
5 6 6.912203 TTTTCGTGATCGGCTTCATTATAA 57.088 33.333 0.00 0.00 37.69 0.98
6 7 8.771920 ATATTTTCGTGATCGGCTTCATTATA 57.228 30.769 0.00 0.00 37.69 0.98
7 8 7.672983 ATATTTTCGTGATCGGCTTCATTAT 57.327 32.000 0.00 0.00 37.69 1.28
8 9 7.490962 AATATTTTCGTGATCGGCTTCATTA 57.509 32.000 0.00 0.00 37.69 1.90
9 10 6.377327 AATATTTTCGTGATCGGCTTCATT 57.623 33.333 0.00 0.00 37.69 2.57
10 11 6.377327 AAATATTTTCGTGATCGGCTTCAT 57.623 33.333 0.00 0.00 37.69 2.57
11 12 5.811399 AAATATTTTCGTGATCGGCTTCA 57.189 34.783 0.00 0.00 37.69 3.02
12 13 6.967199 AGAAAAATATTTTCGTGATCGGCTTC 59.033 34.615 13.68 3.80 37.69 3.86
13 14 6.852664 AGAAAAATATTTTCGTGATCGGCTT 58.147 32.000 13.68 0.00 37.69 4.35
14 15 6.316390 AGAGAAAAATATTTTCGTGATCGGCT 59.684 34.615 13.68 7.67 37.69 5.52
15 16 6.487103 AGAGAAAAATATTTTCGTGATCGGC 58.513 36.000 13.68 5.87 37.69 5.54
16 17 7.429340 CCAAGAGAAAAATATTTTCGTGATCGG 59.571 37.037 13.68 6.37 37.69 4.18
17 18 7.044706 GCCAAGAGAAAAATATTTTCGTGATCG 60.045 37.037 13.68 2.40 33.86 3.69
18 19 7.754924 TGCCAAGAGAAAAATATTTTCGTGATC 59.245 33.333 13.68 7.53 33.86 2.92
19 20 7.542130 GTGCCAAGAGAAAAATATTTTCGTGAT 59.458 33.333 13.68 0.00 33.86 3.06
20 21 6.861055 GTGCCAAGAGAAAAATATTTTCGTGA 59.139 34.615 13.68 0.00 33.86 4.35
21 22 6.640499 TGTGCCAAGAGAAAAATATTTTCGTG 59.360 34.615 13.68 9.84 33.86 4.35
22 23 6.640907 GTGTGCCAAGAGAAAAATATTTTCGT 59.359 34.615 13.68 4.50 33.86 3.85
23 24 6.089417 GGTGTGCCAAGAGAAAAATATTTTCG 59.911 38.462 13.68 0.13 32.62 3.46
24 25 6.928492 TGGTGTGCCAAGAGAAAAATATTTTC 59.072 34.615 13.68 7.34 42.83 2.29
25 26 6.825610 TGGTGTGCCAAGAGAAAAATATTTT 58.174 32.000 7.64 7.64 42.83 1.82
26 27 6.418057 TGGTGTGCCAAGAGAAAAATATTT 57.582 33.333 0.00 0.00 42.83 1.40
40 41 3.215568 CAACGCCTTGGTGTGCCA 61.216 61.111 6.62 0.00 44.38 4.92
41 42 2.904866 TCAACGCCTTGGTGTGCC 60.905 61.111 6.62 0.00 0.00 5.01
42 43 0.882927 TAGTCAACGCCTTGGTGTGC 60.883 55.000 6.62 1.41 0.00 4.57
43 44 0.865769 GTAGTCAACGCCTTGGTGTG 59.134 55.000 6.62 2.19 0.00 3.82
44 45 0.250166 GGTAGTCAACGCCTTGGTGT 60.250 55.000 0.00 0.00 0.00 4.16
45 46 0.250124 TGGTAGTCAACGCCTTGGTG 60.250 55.000 0.00 0.00 0.00 4.17
46 47 0.470766 TTGGTAGTCAACGCCTTGGT 59.529 50.000 0.00 0.00 0.00 3.67
47 48 1.265905 GTTTGGTAGTCAACGCCTTGG 59.734 52.381 0.00 0.00 34.67 3.61
48 49 2.032030 CAGTTTGGTAGTCAACGCCTTG 60.032 50.000 0.00 0.00 34.67 3.61
49 50 2.218603 CAGTTTGGTAGTCAACGCCTT 58.781 47.619 0.00 0.00 34.67 4.35
50 51 1.878953 CAGTTTGGTAGTCAACGCCT 58.121 50.000 0.00 0.00 34.67 5.52
51 52 0.237498 GCAGTTTGGTAGTCAACGCC 59.763 55.000 0.00 0.00 34.67 5.68
52 53 0.941542 TGCAGTTTGGTAGTCAACGC 59.058 50.000 0.00 0.00 34.67 4.84
53 54 2.210116 ACTGCAGTTTGGTAGTCAACG 58.790 47.619 15.25 0.00 34.67 4.10
54 55 3.879932 GACTGCAGTTTGGTAGTCAAC 57.120 47.619 22.65 0.00 46.02 3.18
57 58 3.060602 GAGTGACTGCAGTTTGGTAGTC 58.939 50.000 22.65 13.04 46.65 2.59
58 59 2.700897 AGAGTGACTGCAGTTTGGTAGT 59.299 45.455 22.65 8.27 36.38 2.73
59 60 3.062763 CAGAGTGACTGCAGTTTGGTAG 58.937 50.000 22.65 6.83 39.86 3.18
60 61 3.111853 CAGAGTGACTGCAGTTTGGTA 57.888 47.619 22.65 2.74 39.86 3.25
61 62 1.959042 CAGAGTGACTGCAGTTTGGT 58.041 50.000 22.65 6.22 39.86 3.67
71 72 0.541392 TGTGGTTGTGCAGAGTGACT 59.459 50.000 0.00 0.00 0.00 3.41
72 73 0.940126 CTGTGGTTGTGCAGAGTGAC 59.060 55.000 0.00 0.00 34.87 3.67
73 74 0.179048 CCTGTGGTTGTGCAGAGTGA 60.179 55.000 0.00 0.00 34.87 3.41
74 75 1.168407 CCCTGTGGTTGTGCAGAGTG 61.168 60.000 0.00 0.00 34.87 3.51
75 76 1.149174 CCCTGTGGTTGTGCAGAGT 59.851 57.895 0.00 0.00 34.87 3.24
76 77 1.601759 CCCCTGTGGTTGTGCAGAG 60.602 63.158 0.00 0.00 34.87 3.35
77 78 2.515398 CCCCTGTGGTTGTGCAGA 59.485 61.111 0.00 0.00 34.87 4.26
106 107 9.388506 GCATGTCTAGAATAGGTGCATAAATAT 57.611 33.333 0.00 0.00 39.75 1.28
107 108 7.824289 GGCATGTCTAGAATAGGTGCATAAATA 59.176 37.037 14.15 0.00 40.85 1.40
108 109 6.656693 GGCATGTCTAGAATAGGTGCATAAAT 59.343 38.462 14.15 0.00 40.85 1.40
109 110 5.997746 GGCATGTCTAGAATAGGTGCATAAA 59.002 40.000 14.15 0.00 40.85 1.40
110 111 5.071653 TGGCATGTCTAGAATAGGTGCATAA 59.928 40.000 0.00 0.00 40.85 1.90
111 112 4.592778 TGGCATGTCTAGAATAGGTGCATA 59.407 41.667 0.00 0.00 40.85 3.14
112 113 3.392285 TGGCATGTCTAGAATAGGTGCAT 59.608 43.478 0.00 2.38 40.85 3.96
113 114 2.771372 TGGCATGTCTAGAATAGGTGCA 59.229 45.455 0.00 0.00 40.85 4.57
114 115 3.070159 TCTGGCATGTCTAGAATAGGTGC 59.930 47.826 0.00 0.91 39.78 5.01
115 116 4.798924 GCTCTGGCATGTCTAGAATAGGTG 60.799 50.000 0.00 0.00 37.60 4.00
116 117 3.323403 GCTCTGGCATGTCTAGAATAGGT 59.677 47.826 0.00 0.00 37.60 3.08
117 118 3.306641 GGCTCTGGCATGTCTAGAATAGG 60.307 52.174 0.00 0.00 38.71 2.57
118 119 3.577848 AGGCTCTGGCATGTCTAGAATAG 59.422 47.826 0.00 0.00 39.26 1.73
119 120 3.576118 GAGGCTCTGGCATGTCTAGAATA 59.424 47.826 7.40 0.00 40.87 1.75
120 121 2.368221 GAGGCTCTGGCATGTCTAGAAT 59.632 50.000 7.40 0.00 40.87 2.40
121 122 1.759445 GAGGCTCTGGCATGTCTAGAA 59.241 52.381 7.40 0.00 40.87 2.10
122 123 1.407936 GAGGCTCTGGCATGTCTAGA 58.592 55.000 7.40 1.04 40.87 2.43
123 124 0.031857 CGAGGCTCTGGCATGTCTAG 59.968 60.000 13.50 0.00 40.87 2.43
124 125 0.395724 TCGAGGCTCTGGCATGTCTA 60.396 55.000 13.50 0.00 40.87 2.59
125 126 1.683707 TCGAGGCTCTGGCATGTCT 60.684 57.895 13.50 0.00 40.87 3.41
126 127 1.520342 GTCGAGGCTCTGGCATGTC 60.520 63.158 13.50 0.00 40.87 3.06
127 128 1.548357 AAGTCGAGGCTCTGGCATGT 61.548 55.000 13.50 0.00 40.87 3.21
128 129 0.809241 GAAGTCGAGGCTCTGGCATG 60.809 60.000 13.50 0.00 40.87 4.06
129 130 1.519719 GAAGTCGAGGCTCTGGCAT 59.480 57.895 13.50 0.55 40.87 4.40
130 131 2.650116 GGAAGTCGAGGCTCTGGCA 61.650 63.158 13.50 0.00 40.87 4.92
131 132 2.185608 GGAAGTCGAGGCTCTGGC 59.814 66.667 13.50 7.86 37.82 4.85
132 133 0.682855 AGAGGAAGTCGAGGCTCTGG 60.683 60.000 13.50 0.00 0.00 3.86
133 134 0.455410 CAGAGGAAGTCGAGGCTCTG 59.545 60.000 13.50 6.48 33.53 3.35
134 135 1.319614 GCAGAGGAAGTCGAGGCTCT 61.320 60.000 13.50 0.00 0.00 4.09
135 136 1.140804 GCAGAGGAAGTCGAGGCTC 59.859 63.158 3.87 3.87 0.00 4.70
136 137 1.607756 TGCAGAGGAAGTCGAGGCT 60.608 57.895 0.00 0.00 0.00 4.58
137 138 1.446966 GTGCAGAGGAAGTCGAGGC 60.447 63.158 0.00 0.00 0.00 4.70
138 139 0.605589 AAGTGCAGAGGAAGTCGAGG 59.394 55.000 0.00 0.00 0.00 4.63
139 140 2.729467 CGTAAGTGCAGAGGAAGTCGAG 60.729 54.545 0.00 0.00 0.00 4.04
140 141 1.199327 CGTAAGTGCAGAGGAAGTCGA 59.801 52.381 0.00 0.00 0.00 4.20
141 142 1.618861 CGTAAGTGCAGAGGAAGTCG 58.381 55.000 0.00 0.00 0.00 4.18
142 143 1.336887 TGCGTAAGTGCAGAGGAAGTC 60.337 52.381 0.00 0.00 40.62 3.01
143 144 0.679505 TGCGTAAGTGCAGAGGAAGT 59.320 50.000 0.00 0.00 40.62 3.01
144 145 3.514777 TGCGTAAGTGCAGAGGAAG 57.485 52.632 0.00 0.00 40.62 3.46
152 153 3.678072 TCAGTTAACAGATGCGTAAGTGC 59.322 43.478 8.61 0.00 41.68 4.40
153 154 5.839262 TTCAGTTAACAGATGCGTAAGTG 57.161 39.130 8.61 5.79 41.68 3.16
154 155 5.581085 GGATTCAGTTAACAGATGCGTAAGT 59.419 40.000 8.61 0.00 41.68 2.24
155 156 5.580691 TGGATTCAGTTAACAGATGCGTAAG 59.419 40.000 8.61 0.00 43.44 2.34
156 157 5.483811 TGGATTCAGTTAACAGATGCGTAA 58.516 37.500 8.61 0.00 0.00 3.18
157 158 5.079689 TGGATTCAGTTAACAGATGCGTA 57.920 39.130 8.61 0.00 0.00 4.42
158 159 3.937814 TGGATTCAGTTAACAGATGCGT 58.062 40.909 8.61 0.00 0.00 5.24
159 160 4.728882 GCTTGGATTCAGTTAACAGATGCG 60.729 45.833 8.61 0.00 0.00 4.73
160 161 4.156556 TGCTTGGATTCAGTTAACAGATGC 59.843 41.667 8.61 4.64 0.00 3.91
161 162 5.645067 TCTGCTTGGATTCAGTTAACAGATG 59.355 40.000 8.61 0.00 0.00 2.90
162 163 5.809001 TCTGCTTGGATTCAGTTAACAGAT 58.191 37.500 8.61 0.00 0.00 2.90
163 164 5.227569 TCTGCTTGGATTCAGTTAACAGA 57.772 39.130 8.61 1.92 0.00 3.41
164 165 5.947228 TTCTGCTTGGATTCAGTTAACAG 57.053 39.130 8.61 0.00 0.00 3.16
165 166 6.707440 TTTTCTGCTTGGATTCAGTTAACA 57.293 33.333 8.61 0.00 0.00 2.41
166 167 6.642540 CCTTTTTCTGCTTGGATTCAGTTAAC 59.357 38.462 0.00 0.00 0.00 2.01
167 168 6.323739 ACCTTTTTCTGCTTGGATTCAGTTAA 59.676 34.615 0.00 0.00 0.00 2.01
168 169 5.833131 ACCTTTTTCTGCTTGGATTCAGTTA 59.167 36.000 0.00 0.00 0.00 2.24
169 170 4.651045 ACCTTTTTCTGCTTGGATTCAGTT 59.349 37.500 0.00 0.00 0.00 3.16
170 171 4.038402 CACCTTTTTCTGCTTGGATTCAGT 59.962 41.667 0.00 0.00 0.00 3.41
171 172 4.553323 CACCTTTTTCTGCTTGGATTCAG 58.447 43.478 0.00 0.00 0.00 3.02
172 173 3.243839 GCACCTTTTTCTGCTTGGATTCA 60.244 43.478 0.00 0.00 0.00 2.57
173 174 3.243839 TGCACCTTTTTCTGCTTGGATTC 60.244 43.478 0.00 0.00 34.29 2.52
174 175 2.699846 TGCACCTTTTTCTGCTTGGATT 59.300 40.909 0.00 0.00 34.29 3.01
175 176 2.298163 CTGCACCTTTTTCTGCTTGGAT 59.702 45.455 0.00 0.00 34.29 3.41
176 177 1.682854 CTGCACCTTTTTCTGCTTGGA 59.317 47.619 0.00 0.00 34.29 3.53
177 178 1.410153 ACTGCACCTTTTTCTGCTTGG 59.590 47.619 0.00 0.00 34.29 3.61
178 179 2.877043 ACTGCACCTTTTTCTGCTTG 57.123 45.000 0.00 0.00 34.29 4.01
179 180 3.893326 AAACTGCACCTTTTTCTGCTT 57.107 38.095 0.00 0.00 34.29 3.91
180 181 3.448660 AGAAAACTGCACCTTTTTCTGCT 59.551 39.130 18.56 3.10 45.86 4.24
181 182 3.785486 AGAAAACTGCACCTTTTTCTGC 58.215 40.909 18.56 0.00 45.86 4.26
184 185 4.566759 GGTTCAGAAAACTGCACCTTTTTC 59.433 41.667 10.70 12.49 40.54 2.29
185 186 4.503910 GGTTCAGAAAACTGCACCTTTTT 58.496 39.130 10.70 0.00 37.60 1.94
186 187 3.118775 GGGTTCAGAAAACTGCACCTTTT 60.119 43.478 15.72 0.00 39.89 2.27
187 188 2.430694 GGGTTCAGAAAACTGCACCTTT 59.569 45.455 15.72 0.00 39.89 3.11
188 189 2.031870 GGGTTCAGAAAACTGCACCTT 58.968 47.619 15.72 0.00 39.89 3.50
189 190 1.064017 TGGGTTCAGAAAACTGCACCT 60.064 47.619 15.72 0.00 39.89 4.00
190 191 1.398692 TGGGTTCAGAAAACTGCACC 58.601 50.000 9.76 9.76 39.39 5.01
191 192 2.427095 ACTTGGGTTCAGAAAACTGCAC 59.573 45.455 0.00 0.00 0.00 4.57
192 193 2.733956 ACTTGGGTTCAGAAAACTGCA 58.266 42.857 0.00 0.00 0.00 4.41
193 194 3.801114 AACTTGGGTTCAGAAAACTGC 57.199 42.857 0.00 0.00 0.00 4.40
194 195 5.449999 GGTGTAACTTGGGTTCAGAAAACTG 60.450 44.000 0.00 0.00 36.92 3.16
195 196 4.643334 GGTGTAACTTGGGTTCAGAAAACT 59.357 41.667 0.00 0.00 36.92 2.66
196 197 4.643334 AGGTGTAACTTGGGTTCAGAAAAC 59.357 41.667 0.00 0.00 36.92 2.43
197 198 4.862371 AGGTGTAACTTGGGTTCAGAAAA 58.138 39.130 0.00 0.00 36.92 2.29
198 199 4.513406 AGGTGTAACTTGGGTTCAGAAA 57.487 40.909 0.00 0.00 36.92 2.52
199 200 4.204012 CAAGGTGTAACTTGGGTTCAGAA 58.796 43.478 1.70 0.00 43.14 3.02
200 201 3.815809 CAAGGTGTAACTTGGGTTCAGA 58.184 45.455 1.70 0.00 43.14 3.27
201 202 2.293399 GCAAGGTGTAACTTGGGTTCAG 59.707 50.000 11.30 0.00 46.10 3.02
202 203 2.092103 AGCAAGGTGTAACTTGGGTTCA 60.092 45.455 11.30 0.00 46.10 3.18
203 204 2.583143 AGCAAGGTGTAACTTGGGTTC 58.417 47.619 11.30 0.00 46.10 3.62
204 205 2.748209 AGCAAGGTGTAACTTGGGTT 57.252 45.000 11.30 0.00 46.10 4.11
205 206 3.868619 TTAGCAAGGTGTAACTTGGGT 57.131 42.857 11.30 1.53 46.10 4.51
206 207 5.523438 TTTTTAGCAAGGTGTAACTTGGG 57.477 39.130 11.30 0.00 46.10 4.12
225 226 3.186909 GTTCAGAAAACTGCGCCTTTTT 58.813 40.909 14.06 14.06 0.00 1.94
226 227 2.481276 GGTTCAGAAAACTGCGCCTTTT 60.481 45.455 4.18 8.88 0.00 2.27
227 228 1.067060 GGTTCAGAAAACTGCGCCTTT 59.933 47.619 4.18 1.30 0.00 3.11
228 229 0.668535 GGTTCAGAAAACTGCGCCTT 59.331 50.000 4.18 0.00 0.00 4.35
229 230 0.465460 TGGTTCAGAAAACTGCGCCT 60.465 50.000 4.18 0.00 0.00 5.52
230 231 0.383949 TTGGTTCAGAAAACTGCGCC 59.616 50.000 4.18 0.00 0.00 6.53
231 232 2.202295 TTTGGTTCAGAAAACTGCGC 57.798 45.000 0.00 0.00 0.00 6.09
232 233 3.735746 GGAATTTGGTTCAGAAAACTGCG 59.264 43.478 0.00 0.00 38.64 5.18
233 234 4.507756 GTGGAATTTGGTTCAGAAAACTGC 59.492 41.667 0.00 0.00 38.64 4.40
234 235 5.049828 GGTGGAATTTGGTTCAGAAAACTG 58.950 41.667 0.00 0.00 38.64 3.16
235 236 4.962362 AGGTGGAATTTGGTTCAGAAAACT 59.038 37.500 0.00 0.00 38.64 2.66
236 237 5.276461 AGGTGGAATTTGGTTCAGAAAAC 57.724 39.130 0.00 0.00 38.64 2.43
237 238 7.610580 ATTAGGTGGAATTTGGTTCAGAAAA 57.389 32.000 0.00 0.00 38.64 2.29
238 239 7.610580 AATTAGGTGGAATTTGGTTCAGAAA 57.389 32.000 0.00 0.00 38.64 2.52
239 240 8.713708 TTAATTAGGTGGAATTTGGTTCAGAA 57.286 30.769 0.00 0.00 38.64 3.02
240 241 8.713708 TTTAATTAGGTGGAATTTGGTTCAGA 57.286 30.769 0.00 0.00 38.64 3.27
241 242 8.585018 ACTTTAATTAGGTGGAATTTGGTTCAG 58.415 33.333 0.00 0.00 38.64 3.02
242 243 8.485578 ACTTTAATTAGGTGGAATTTGGTTCA 57.514 30.769 0.00 0.00 38.64 3.18
243 244 7.753580 CGACTTTAATTAGGTGGAATTTGGTTC 59.246 37.037 0.00 0.00 36.04 3.62
244 245 7.231925 ACGACTTTAATTAGGTGGAATTTGGTT 59.768 33.333 0.00 0.00 31.51 3.67
245 246 6.717997 ACGACTTTAATTAGGTGGAATTTGGT 59.282 34.615 0.00 0.00 31.51 3.67
246 247 7.153217 ACGACTTTAATTAGGTGGAATTTGG 57.847 36.000 0.00 0.00 31.51 3.28
247 248 9.471084 AAAACGACTTTAATTAGGTGGAATTTG 57.529 29.630 0.00 0.00 31.51 2.32
250 251 9.511272 ACTAAAACGACTTTAATTAGGTGGAAT 57.489 29.630 0.00 0.00 0.00 3.01
251 252 8.907222 ACTAAAACGACTTTAATTAGGTGGAA 57.093 30.769 0.00 0.00 0.00 3.53
252 253 9.995003 TTACTAAAACGACTTTAATTAGGTGGA 57.005 29.630 0.00 0.00 0.00 4.02
256 257 9.750882 GCTGTTACTAAAACGACTTTAATTAGG 57.249 33.333 0.00 0.00 0.00 2.69
468 472 5.819901 ACTTTAAGAGAGATGGCTAATGTGC 59.180 40.000 0.00 0.00 0.00 4.57
599 605 2.478890 ATGCATGCTCCGCTTCTGC 61.479 57.895 20.33 0.00 32.81 4.26
626 632 4.635765 TGTCAAGAACAAGTCAGACCAAAG 59.364 41.667 0.00 0.00 34.03 2.77
635 646 5.064707 TGCTGTTAAGTGTCAAGAACAAGTC 59.935 40.000 0.00 0.00 40.31 3.01
657 668 0.109132 AGCCGCAGCAAACTTAATGC 60.109 50.000 0.00 0.00 43.56 3.56
673 684 2.299521 AGGACTGTCGTATAGTCAGCC 58.700 52.381 14.78 0.00 44.92 4.85
2001 3694 1.134280 AGATCCCATGCCTTGTCTTCG 60.134 52.381 0.00 0.00 0.00 3.79
2350 4044 3.369052 CCCTCTGCTGTCAATAACCGTAA 60.369 47.826 0.00 0.00 0.00 3.18
2578 4272 1.661463 TCCATCTCAAGAGTGCCCTT 58.339 50.000 0.00 0.00 0.00 3.95
2833 4566 4.219070 TGGGAGCATCTTCACTTTTGAATG 59.781 41.667 0.00 0.00 41.05 2.67
2961 4694 5.122869 TGCATCAATTACTCTCTCAGCAAAC 59.877 40.000 0.00 0.00 0.00 2.93
3009 4742 3.403936 GGGGATACACATGCCACTC 57.596 57.895 0.00 0.00 44.28 3.51
3054 4787 3.777106 TCCAATGCTTGAAGAGTCTGT 57.223 42.857 0.00 0.00 0.00 3.41
3060 4793 5.569355 TCCTGTATTTCCAATGCTTGAAGA 58.431 37.500 0.00 0.00 0.00 2.87
3063 4796 5.508567 TCATCCTGTATTTCCAATGCTTGA 58.491 37.500 0.00 0.00 0.00 3.02
3076 4809 4.797743 TGTCTAGCAGACTCATCCTGTAT 58.202 43.478 14.60 0.00 45.27 2.29
3092 4825 4.739137 GCCTCAGCTCACCTAAATGTCTAG 60.739 50.000 0.00 0.00 35.50 2.43
3105 4838 2.708051 CTTCTCATTTGCCTCAGCTCA 58.292 47.619 0.00 0.00 40.80 4.26
3149 4882 3.380637 ACCGATGCGTCTACAGTAGATTT 59.619 43.478 13.59 0.00 37.13 2.17
3217 4950 3.914312 GAACCTCGTTCTCATCACTTGA 58.086 45.455 0.00 0.00 39.23 3.02
3348 5081 8.281212 ACCAAGATAGAACCAATGAATACAAC 57.719 34.615 0.00 0.00 0.00 3.32
3376 5109 1.011595 AGGGGGTCTTCTCTCAGCTA 58.988 55.000 0.00 0.00 0.00 3.32
3417 5150 1.779569 AACGTAGCTCCGTCAAGTTG 58.220 50.000 4.31 0.00 40.85 3.16
3427 5160 1.336887 TGCTCTGGTGAAACGTAGCTC 60.337 52.381 0.00 0.00 37.39 4.09
3429 5162 1.726853 ATGCTCTGGTGAAACGTAGC 58.273 50.000 0.00 0.00 38.12 3.58
3571 5304 6.864342 TGCTGAGGTTGACTAAGTATAGTTC 58.136 40.000 0.00 0.00 42.47 3.01
3612 5345 4.751431 AGGAACTCAATGCCAGCC 57.249 55.556 0.00 0.00 0.00 4.85
3705 5438 1.683917 CGTGAGAGTATCCCTCCTTGG 59.316 57.143 0.00 0.00 41.47 3.61
3711 5444 1.828660 CGCCCGTGAGAGTATCCCT 60.829 63.158 0.00 0.00 33.66 4.20
3712 5445 1.389609 TTCGCCCGTGAGAGTATCCC 61.390 60.000 0.00 0.00 33.66 3.85
3713 5446 0.030908 CTTCGCCCGTGAGAGTATCC 59.969 60.000 0.00 0.00 33.66 2.59
3717 5450 1.134560 GAATACTTCGCCCGTGAGAGT 59.865 52.381 2.09 0.00 0.00 3.24
3718 5451 1.536284 GGAATACTTCGCCCGTGAGAG 60.536 57.143 2.09 0.00 0.00 3.20
3719 5452 0.458669 GGAATACTTCGCCCGTGAGA 59.541 55.000 2.09 0.00 0.00 3.27
3720 5453 0.529992 GGGAATACTTCGCCCGTGAG 60.530 60.000 0.00 0.00 36.70 3.51
3721 5454 0.974010 AGGGAATACTTCGCCCGTGA 60.974 55.000 0.00 0.00 46.68 4.35
3722 5455 0.529992 GAGGGAATACTTCGCCCGTG 60.530 60.000 0.00 0.00 46.68 4.94
3723 5456 1.683418 GGAGGGAATACTTCGCCCGT 61.683 60.000 0.00 0.00 46.68 5.28
3724 5457 1.069258 GGAGGGAATACTTCGCCCG 59.931 63.158 0.00 0.00 46.68 6.13
3725 5458 1.069258 CGGAGGGAATACTTCGCCC 59.931 63.158 0.00 0.00 42.99 6.13
3728 5461 3.318275 TCAATCTCGGAGGGAATACTTCG 59.682 47.826 4.96 0.00 40.84 3.79
3793 5535 1.705186 ACTAGTTGGCAGGTGATTGGT 59.295 47.619 0.00 0.00 0.00 3.67
3864 5629 6.728200 CATAACCAACACCATATCACATCAC 58.272 40.000 0.00 0.00 0.00 3.06
3896 5664 4.268359 GTGAAGCATCTTCATTCCTTCCT 58.732 43.478 11.79 0.00 32.91 3.36
3905 5678 2.224281 ACTCGTTGGTGAAGCATCTTCA 60.224 45.455 5.25 5.25 0.00 3.02
3932 5705 0.250234 TTGAGTGAGATCCAAGGCCG 59.750 55.000 0.00 0.00 0.00 6.13
3933 5706 2.295885 CATTGAGTGAGATCCAAGGCC 58.704 52.381 0.00 0.00 0.00 5.19
3934 5707 1.674962 GCATTGAGTGAGATCCAAGGC 59.325 52.381 3.23 3.23 39.72 4.35
3936 5709 2.355132 GCAGCATTGAGTGAGATCCAAG 59.645 50.000 0.00 0.00 0.00 3.61
3937 5710 2.026542 AGCAGCATTGAGTGAGATCCAA 60.027 45.455 0.00 0.00 0.00 3.53
3940 5713 2.902523 TCAGCAGCATTGAGTGAGATC 58.097 47.619 0.00 0.00 0.00 2.75
3942 5715 2.500504 AGATCAGCAGCATTGAGTGAGA 59.499 45.455 0.00 0.00 0.00 3.27
3944 5717 2.629051 CAGATCAGCAGCATTGAGTGA 58.371 47.619 0.00 0.00 0.00 3.41
3947 5720 1.332065 CAGCAGATCAGCAGCATTGAG 59.668 52.381 13.03 0.00 36.85 3.02
3949 5722 1.095600 ACAGCAGATCAGCAGCATTG 58.904 50.000 13.03 3.94 36.85 2.82
3950 5723 2.286872 GTACAGCAGATCAGCAGCATT 58.713 47.619 13.03 0.00 36.85 3.56
3951 5724 1.208776 TGTACAGCAGATCAGCAGCAT 59.791 47.619 13.03 0.00 36.85 3.79
3967 5741 1.067071 CAGAGGAAACCCGGACTGTAC 60.067 57.143 0.73 0.00 0.00 2.90
3971 5745 1.536662 AGCAGAGGAAACCCGGACT 60.537 57.895 0.73 0.00 0.00 3.85
3995 5771 1.908066 GACGCACGGTTGGACATTCC 61.908 60.000 0.00 0.00 36.96 3.01
4002 5778 3.041940 GTGGAGACGCACGGTTGG 61.042 66.667 0.00 0.00 41.67 3.77
4004 5780 2.391724 ATTGGTGGAGACGCACGGTT 62.392 55.000 0.00 0.00 44.70 4.44
4006 5782 1.671054 AATTGGTGGAGACGCACGG 60.671 57.895 0.00 0.00 44.70 4.94
4007 5783 1.227999 ACAATTGGTGGAGACGCACG 61.228 55.000 10.83 0.00 44.70 5.34
4009 5785 0.950836 CAACAATTGGTGGAGACGCA 59.049 50.000 16.07 0.00 44.70 5.24
4010 5786 0.387239 GCAACAATTGGTGGAGACGC 60.387 55.000 24.41 5.53 41.20 5.19
4016 5792 1.818674 GGAGGTAGCAACAATTGGTGG 59.181 52.381 24.41 7.05 42.14 4.61
4019 5795 2.795329 AGTGGAGGTAGCAACAATTGG 58.205 47.619 10.83 0.00 0.00 3.16
4021 5797 4.041691 ACTGTAGTGGAGGTAGCAACAATT 59.958 41.667 0.00 0.00 0.00 2.32
4022 5798 3.583086 ACTGTAGTGGAGGTAGCAACAAT 59.417 43.478 0.00 0.00 0.00 2.71
4026 5802 1.275291 GCACTGTAGTGGAGGTAGCAA 59.725 52.381 13.41 0.00 45.72 3.91
4027 5803 0.895530 GCACTGTAGTGGAGGTAGCA 59.104 55.000 13.41 0.00 45.72 3.49
4028 5804 1.187087 AGCACTGTAGTGGAGGTAGC 58.813 55.000 13.41 0.00 45.72 3.58
4029 5805 2.826128 TGAAGCACTGTAGTGGAGGTAG 59.174 50.000 13.41 0.00 45.72 3.18
4030 5806 2.561419 GTGAAGCACTGTAGTGGAGGTA 59.439 50.000 13.41 0.00 45.72 3.08
4031 5807 1.344763 GTGAAGCACTGTAGTGGAGGT 59.655 52.381 13.41 0.00 45.72 3.85
4032 5808 1.620819 AGTGAAGCACTGTAGTGGAGG 59.379 52.381 13.41 0.00 43.63 4.30
4033 5809 3.006323 AGAAGTGAAGCACTGTAGTGGAG 59.994 47.826 13.41 0.00 44.62 3.86
4034 5810 2.965831 AGAAGTGAAGCACTGTAGTGGA 59.034 45.455 13.41 0.00 44.62 4.02
4035 5811 3.062763 CAGAAGTGAAGCACTGTAGTGG 58.937 50.000 13.41 0.00 44.62 4.00
4036 5812 2.478134 GCAGAAGTGAAGCACTGTAGTG 59.522 50.000 7.64 7.64 44.62 2.74
4037 5813 2.366916 AGCAGAAGTGAAGCACTGTAGT 59.633 45.455 0.22 0.00 44.62 2.73
4038 5814 3.037431 AGCAGAAGTGAAGCACTGTAG 57.963 47.619 0.22 0.00 44.62 2.74
4039 5815 3.574396 AGTAGCAGAAGTGAAGCACTGTA 59.426 43.478 0.22 0.00 44.62 2.74
4040 5816 2.366916 AGTAGCAGAAGTGAAGCACTGT 59.633 45.455 0.22 0.00 44.62 3.55
4041 5817 3.037431 AGTAGCAGAAGTGAAGCACTG 57.963 47.619 0.22 0.00 44.62 3.66
4043 5819 3.923461 CAGTAGTAGCAGAAGTGAAGCAC 59.077 47.826 0.00 0.00 34.10 4.40
4044 5820 3.615110 GCAGTAGTAGCAGAAGTGAAGCA 60.615 47.826 0.00 0.00 0.00 3.91
4045 5821 2.926838 GCAGTAGTAGCAGAAGTGAAGC 59.073 50.000 0.00 0.00 0.00 3.86
4046 5822 4.172505 CAGCAGTAGTAGCAGAAGTGAAG 58.827 47.826 0.00 0.00 0.00 3.02
4047 5823 3.615110 GCAGCAGTAGTAGCAGAAGTGAA 60.615 47.826 0.00 0.00 0.00 3.18
4048 5824 2.094494 GCAGCAGTAGTAGCAGAAGTGA 60.094 50.000 0.00 0.00 0.00 3.41
4049 5825 2.266554 GCAGCAGTAGTAGCAGAAGTG 58.733 52.381 0.00 0.00 0.00 3.16
4050 5826 1.205893 GGCAGCAGTAGTAGCAGAAGT 59.794 52.381 0.00 0.00 0.00 3.01
4051 5827 1.480137 AGGCAGCAGTAGTAGCAGAAG 59.520 52.381 0.00 0.00 0.00 2.85
4052 5828 1.561643 AGGCAGCAGTAGTAGCAGAA 58.438 50.000 0.00 0.00 0.00 3.02
4053 5829 2.025155 GTAGGCAGCAGTAGTAGCAGA 58.975 52.381 0.00 0.00 0.00 4.26
4072 5848 1.374758 GCACGAACCTAGCAGCAGT 60.375 57.895 0.00 0.00 0.00 4.40
4074 5850 2.047274 GGCACGAACCTAGCAGCA 60.047 61.111 0.00 0.00 0.00 4.41
4075 5851 1.026718 AATGGCACGAACCTAGCAGC 61.027 55.000 0.00 0.00 0.00 5.25
4076 5852 0.729116 CAATGGCACGAACCTAGCAG 59.271 55.000 0.00 0.00 0.00 4.24
4078 5854 0.447801 CACAATGGCACGAACCTAGC 59.552 55.000 0.00 0.00 0.00 3.42
4082 5858 1.371635 GCACACAATGGCACGAACC 60.372 57.895 0.00 0.00 0.00 3.62
4083 5859 0.030638 AAGCACACAATGGCACGAAC 59.969 50.000 0.00 0.00 0.00 3.95
4084 5860 1.598882 TAAGCACACAATGGCACGAA 58.401 45.000 0.00 0.00 0.00 3.85
4085 5861 1.737236 GATAAGCACACAATGGCACGA 59.263 47.619 0.00 0.00 0.00 4.35
4086 5862 1.468127 TGATAAGCACACAATGGCACG 59.532 47.619 0.00 0.00 0.00 5.34
4087 5863 3.788333 ATGATAAGCACACAATGGCAC 57.212 42.857 0.00 0.00 0.00 5.01
4088 5864 4.021280 ACAAATGATAAGCACACAATGGCA 60.021 37.500 0.00 0.00 0.00 4.92
4089 5865 4.327898 CACAAATGATAAGCACACAATGGC 59.672 41.667 0.00 0.00 0.00 4.40
4090 5866 5.712004 TCACAAATGATAAGCACACAATGG 58.288 37.500 0.00 0.00 0.00 3.16
4104 5888 6.112734 AGTGCCGTCTTATTATCACAAATGA 58.887 36.000 0.00 0.00 39.83 2.57
4107 5891 7.042992 CGATAAGTGCCGTCTTATTATCACAAA 60.043 37.037 7.14 0.00 39.69 2.83
4112 5896 6.377406 CACGATAAGTGCCGTCTTATTATC 57.623 41.667 0.00 0.00 44.72 1.75
4131 5915 1.869690 CTCGCAGTCAGTCTCACGA 59.130 57.895 0.00 0.00 32.97 4.35
4137 5921 3.372206 ACATAAATTGCTCGCAGTCAGTC 59.628 43.478 0.00 0.00 0.00 3.51
4138 5922 3.338249 ACATAAATTGCTCGCAGTCAGT 58.662 40.909 0.00 0.00 0.00 3.41
4139 5923 4.346734 AACATAAATTGCTCGCAGTCAG 57.653 40.909 0.00 0.00 0.00 3.51
4140 5924 4.379394 GGAAACATAAATTGCTCGCAGTCA 60.379 41.667 0.00 0.00 0.00 3.41
4145 5929 3.832276 TGTGGAAACATAAATTGCTCGC 58.168 40.909 0.00 0.00 46.14 5.03
4156 5940 8.908903 TGTAAAGTAGTTTGAATGTGGAAACAT 58.091 29.630 5.77 0.00 46.14 2.71
4176 5960 9.920826 CACACAAATAGCAGTACATATGTAAAG 57.079 33.333 17.07 13.05 31.52 1.85
4182 5966 5.879777 TGCACACACAAATAGCAGTACATAT 59.120 36.000 0.00 0.00 0.00 1.78
4183 5967 5.241662 TGCACACACAAATAGCAGTACATA 58.758 37.500 0.00 0.00 0.00 2.29
4184 5968 4.071423 TGCACACACAAATAGCAGTACAT 58.929 39.130 0.00 0.00 0.00 2.29
4185 5969 3.471680 TGCACACACAAATAGCAGTACA 58.528 40.909 0.00 0.00 0.00 2.90
4198 5982 5.639506 AGTCTGTCTTACAATATGCACACAC 59.360 40.000 0.00 0.00 0.00 3.82
4206 5990 7.030165 CACGACTCAAGTCTGTCTTACAATAT 58.970 38.462 8.43 0.00 42.66 1.28
4215 5999 2.795470 GGAAACACGACTCAAGTCTGTC 59.205 50.000 8.43 0.00 42.66 3.51
4216 6000 2.167693 TGGAAACACGACTCAAGTCTGT 59.832 45.455 8.43 8.47 38.03 3.41
4217 6001 2.821546 TGGAAACACGACTCAAGTCTG 58.178 47.619 8.43 7.94 38.03 3.51
4252 6045 1.666553 TTCCCAACTAGCACACGCG 60.667 57.895 3.53 3.53 45.49 6.01
4253 6046 0.882927 TGTTCCCAACTAGCACACGC 60.883 55.000 0.00 0.00 38.99 5.34
4254 6047 1.588674 TTGTTCCCAACTAGCACACG 58.411 50.000 0.00 0.00 0.00 4.49
4255 6048 2.884639 ACATTGTTCCCAACTAGCACAC 59.115 45.455 0.00 0.00 32.26 3.82
4256 6049 3.222173 ACATTGTTCCCAACTAGCACA 57.778 42.857 0.00 0.00 32.26 4.57
4257 6050 4.941263 TCATACATTGTTCCCAACTAGCAC 59.059 41.667 0.00 0.00 32.26 4.40
4258 6051 5.172687 TCATACATTGTTCCCAACTAGCA 57.827 39.130 0.00 0.00 32.26 3.49
4259 6052 6.058183 AGATCATACATTGTTCCCAACTAGC 58.942 40.000 0.00 0.00 32.26 3.42
4260 6053 6.422100 CGAGATCATACATTGTTCCCAACTAG 59.578 42.308 0.00 0.00 32.26 2.57
4261 6054 6.280643 CGAGATCATACATTGTTCCCAACTA 58.719 40.000 0.00 0.00 32.26 2.24
4262 6055 5.118990 CGAGATCATACATTGTTCCCAACT 58.881 41.667 0.00 0.00 32.26 3.16
4263 6056 4.260784 GCGAGATCATACATTGTTCCCAAC 60.261 45.833 0.00 0.00 32.26 3.77
4264 6057 3.876914 GCGAGATCATACATTGTTCCCAA 59.123 43.478 0.00 0.00 34.45 4.12
4265 6058 3.118445 TGCGAGATCATACATTGTTCCCA 60.118 43.478 0.00 0.00 0.00 4.37
4266 6059 3.466836 TGCGAGATCATACATTGTTCCC 58.533 45.455 0.00 0.00 0.00 3.97
4267 6060 6.974932 ATATGCGAGATCATACATTGTTCC 57.025 37.500 0.00 0.00 32.36 3.62
4268 6061 8.498358 TGAAATATGCGAGATCATACATTGTTC 58.502 33.333 0.00 3.64 32.36 3.18
4269 6062 8.382030 TGAAATATGCGAGATCATACATTGTT 57.618 30.769 0.00 0.00 32.36 2.83
4270 6063 7.967890 TGAAATATGCGAGATCATACATTGT 57.032 32.000 0.00 0.00 32.36 2.71
4271 6064 9.836076 AATTGAAATATGCGAGATCATACATTG 57.164 29.630 0.00 0.00 32.36 2.82
4272 6065 9.836076 CAATTGAAATATGCGAGATCATACATT 57.164 29.630 0.00 0.00 32.36 2.71
4273 6066 9.006839 ACAATTGAAATATGCGAGATCATACAT 57.993 29.630 13.59 0.00 32.36 2.29
4274 6067 8.284693 CACAATTGAAATATGCGAGATCATACA 58.715 33.333 13.59 0.00 32.36 2.29
4275 6068 7.747799 CCACAATTGAAATATGCGAGATCATAC 59.252 37.037 13.59 0.00 32.36 2.39
4276 6069 7.573656 GCCACAATTGAAATATGCGAGATCATA 60.574 37.037 13.59 0.00 33.89 2.15
4277 6070 6.675026 CCACAATTGAAATATGCGAGATCAT 58.325 36.000 13.59 0.00 0.00 2.45
4278 6071 5.506151 GCCACAATTGAAATATGCGAGATCA 60.506 40.000 13.59 0.00 0.00 2.92
4279 6072 4.913924 GCCACAATTGAAATATGCGAGATC 59.086 41.667 13.59 0.00 0.00 2.75
4280 6073 4.581824 AGCCACAATTGAAATATGCGAGAT 59.418 37.500 13.59 0.00 0.00 2.75
4281 6074 3.947196 AGCCACAATTGAAATATGCGAGA 59.053 39.130 13.59 0.00 0.00 4.04
4282 6075 4.039703 CAGCCACAATTGAAATATGCGAG 58.960 43.478 13.59 0.89 0.00 5.03
4283 6076 3.443329 ACAGCCACAATTGAAATATGCGA 59.557 39.130 13.59 0.00 0.00 5.10
4284 6077 3.772932 ACAGCCACAATTGAAATATGCG 58.227 40.909 13.59 4.76 0.00 4.73
4285 6078 7.455447 GTTTAACAGCCACAATTGAAATATGC 58.545 34.615 13.59 5.14 0.00 3.14
4286 6079 7.540400 TCGTTTAACAGCCACAATTGAAATATG 59.460 33.333 13.59 6.66 0.00 1.78
4287 6080 7.598278 TCGTTTAACAGCCACAATTGAAATAT 58.402 30.769 13.59 0.00 0.00 1.28
4288 6081 6.971602 TCGTTTAACAGCCACAATTGAAATA 58.028 32.000 13.59 0.00 0.00 1.40
4289 6082 5.837437 TCGTTTAACAGCCACAATTGAAAT 58.163 33.333 13.59 0.00 0.00 2.17
4290 6083 5.250235 TCGTTTAACAGCCACAATTGAAA 57.750 34.783 13.59 0.00 0.00 2.69
4291 6084 4.902443 TCGTTTAACAGCCACAATTGAA 57.098 36.364 13.59 0.00 0.00 2.69
4292 6085 4.902443 TTCGTTTAACAGCCACAATTGA 57.098 36.364 13.59 0.00 0.00 2.57
4293 6086 5.040635 ACTTTCGTTTAACAGCCACAATTG 58.959 37.500 3.24 3.24 0.00 2.32
4294 6087 5.257082 ACTTTCGTTTAACAGCCACAATT 57.743 34.783 0.00 0.00 0.00 2.32
4295 6088 4.911514 ACTTTCGTTTAACAGCCACAAT 57.088 36.364 0.00 0.00 0.00 2.71
4296 6089 5.333492 CGATACTTTCGTTTAACAGCCACAA 60.333 40.000 0.00 0.00 43.01 3.33
4297 6090 4.150980 CGATACTTTCGTTTAACAGCCACA 59.849 41.667 0.00 0.00 43.01 4.17
4298 6091 4.435121 CCGATACTTTCGTTTAACAGCCAC 60.435 45.833 0.00 0.00 46.65 5.01
4299 6092 3.680937 CCGATACTTTCGTTTAACAGCCA 59.319 43.478 0.00 0.00 46.65 4.75
4300 6093 3.484721 GCCGATACTTTCGTTTAACAGCC 60.485 47.826 0.00 0.00 46.65 4.85
4301 6094 3.370061 AGCCGATACTTTCGTTTAACAGC 59.630 43.478 0.00 0.00 46.65 4.40
4302 6095 5.107220 ACAAGCCGATACTTTCGTTTAACAG 60.107 40.000 0.00 0.00 46.65 3.16
4303 6096 4.751098 ACAAGCCGATACTTTCGTTTAACA 59.249 37.500 0.00 0.00 46.65 2.41
4304 6097 5.077424 CACAAGCCGATACTTTCGTTTAAC 58.923 41.667 0.00 0.00 46.65 2.01
4305 6098 4.989797 TCACAAGCCGATACTTTCGTTTAA 59.010 37.500 0.00 0.00 46.65 1.52
4306 6099 4.558178 TCACAAGCCGATACTTTCGTTTA 58.442 39.130 0.00 0.00 46.65 2.01
4307 6100 3.395639 TCACAAGCCGATACTTTCGTTT 58.604 40.909 0.00 0.00 46.65 3.60
4308 6101 3.034721 TCACAAGCCGATACTTTCGTT 57.965 42.857 0.00 0.00 46.65 3.85
4309 6102 2.736144 TCACAAGCCGATACTTTCGT 57.264 45.000 0.00 0.00 46.65 3.85
4311 6104 9.813080 GATTATAAATCACAAGCCGATACTTTC 57.187 33.333 0.00 0.00 0.00 2.62
4312 6105 8.784043 GGATTATAAATCACAAGCCGATACTTT 58.216 33.333 2.36 0.00 0.00 2.66
4313 6106 8.157476 AGGATTATAAATCACAAGCCGATACTT 58.843 33.333 2.36 0.00 32.98 2.24
4314 6107 7.680730 AGGATTATAAATCACAAGCCGATACT 58.319 34.615 2.36 0.00 32.98 2.12
4315 6108 7.602644 TGAGGATTATAAATCACAAGCCGATAC 59.397 37.037 2.36 0.00 32.98 2.24
4316 6109 7.676004 TGAGGATTATAAATCACAAGCCGATA 58.324 34.615 2.36 0.00 32.98 2.92
4317 6110 6.533730 TGAGGATTATAAATCACAAGCCGAT 58.466 36.000 2.36 0.00 32.98 4.18
4318 6111 5.924356 TGAGGATTATAAATCACAAGCCGA 58.076 37.500 2.36 0.00 32.98 5.54
4319 6112 5.991606 TCTGAGGATTATAAATCACAAGCCG 59.008 40.000 2.36 0.00 32.98 5.52
4320 6113 7.992754 ATCTGAGGATTATAAATCACAAGCC 57.007 36.000 2.36 0.00 0.00 4.35
4333 6126 9.819754 TCTCTCAAGATGAATATCTGAGGATTA 57.180 33.333 0.00 0.00 42.80 1.75
4334 6127 8.724113 TCTCTCAAGATGAATATCTGAGGATT 57.276 34.615 0.00 0.00 42.80 3.01
4335 6128 8.724113 TTCTCTCAAGATGAATATCTGAGGAT 57.276 34.615 0.00 0.00 42.80 3.24
4336 6129 8.724113 ATTCTCTCAAGATGAATATCTGAGGA 57.276 34.615 0.00 0.00 42.80 3.71
4337 6130 9.210329 CAATTCTCTCAAGATGAATATCTGAGG 57.790 37.037 0.00 0.00 42.80 3.86
4338 6131 9.210329 CCAATTCTCTCAAGATGAATATCTGAG 57.790 37.037 0.00 0.00 42.80 3.35
4339 6132 7.660617 GCCAATTCTCTCAAGATGAATATCTGA 59.339 37.037 0.00 0.00 42.80 3.27
4340 6133 7.662258 AGCCAATTCTCTCAAGATGAATATCTG 59.338 37.037 0.00 0.00 42.80 2.90
4341 6134 7.747690 AGCCAATTCTCTCAAGATGAATATCT 58.252 34.615 0.00 0.00 45.51 1.98
4342 6135 7.982761 AGCCAATTCTCTCAAGATGAATATC 57.017 36.000 0.00 0.00 31.16 1.63
4343 6136 7.778853 ACAAGCCAATTCTCTCAAGATGAATAT 59.221 33.333 0.00 0.00 31.16 1.28
4344 6137 7.066645 CACAAGCCAATTCTCTCAAGATGAATA 59.933 37.037 0.00 0.00 31.16 1.75
4345 6138 5.950549 ACAAGCCAATTCTCTCAAGATGAAT 59.049 36.000 0.00 0.00 32.52 2.57
4346 6139 5.182570 CACAAGCCAATTCTCTCAAGATGAA 59.817 40.000 0.00 0.00 0.00 2.57
4347 6140 4.698780 CACAAGCCAATTCTCTCAAGATGA 59.301 41.667 0.00 0.00 0.00 2.92
4348 6141 4.698780 TCACAAGCCAATTCTCTCAAGATG 59.301 41.667 0.00 0.00 0.00 2.90
4349 6142 4.914983 TCACAAGCCAATTCTCTCAAGAT 58.085 39.130 0.00 0.00 0.00 2.40
4350 6143 4.356405 TCACAAGCCAATTCTCTCAAGA 57.644 40.909 0.00 0.00 0.00 3.02
4351 6144 5.182570 TGAATCACAAGCCAATTCTCTCAAG 59.817 40.000 0.00 0.00 31.99 3.02
4352 6145 5.072055 TGAATCACAAGCCAATTCTCTCAA 58.928 37.500 0.00 0.00 31.99 3.02
4353 6146 4.654915 TGAATCACAAGCCAATTCTCTCA 58.345 39.130 0.00 0.00 31.99 3.27
4354 6147 5.633830 TTGAATCACAAGCCAATTCTCTC 57.366 39.130 0.00 0.00 34.20 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.