Multiple sequence alignment - TraesCS7D01G039700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G039700 chr7D 100.000 2804 0 0 1 2804 20287935 20285132 0.000000e+00 5179.0
1 TraesCS7D01G039700 chr7D 96.602 1030 31 2 674 1703 20318820 20319845 0.000000e+00 1705.0
2 TraesCS7D01G039700 chr7D 89.520 458 41 4 1 453 20316750 20317205 8.710000e-160 573.0
3 TraesCS7D01G039700 chr7D 77.634 541 55 30 1730 2222 20319980 20320502 4.600000e-68 268.0
4 TraesCS7D01G039700 chr7D 86.395 147 16 2 2366 2512 20320617 20320759 1.040000e-34 158.0
5 TraesCS7D01G039700 chr7D 95.833 48 2 0 2614 2661 615362319 615362366 8.330000e-11 78.7
6 TraesCS7D01G039700 chr7D 89.091 55 6 0 537 591 599808001 599808055 5.010000e-08 69.4
7 TraesCS7D01G039700 chr7D 100.000 28 0 0 582 609 43075309 43075336 5.000000e-03 52.8
8 TraesCS7D01G039700 chr7D 100.000 28 0 0 2640 2667 529489342 529489315 5.000000e-03 52.8
9 TraesCS7D01G039700 chr7A 95.393 1042 46 2 663 1703 20435810 20436850 0.000000e+00 1657.0
10 TraesCS7D01G039700 chr7A 95.098 510 17 2 1 502 20433179 20433688 0.000000e+00 797.0
11 TraesCS7D01G039700 chr7A 77.694 529 51 32 1730 2222 20436990 20437487 7.700000e-66 261.0
12 TraesCS7D01G039700 chr7A 87.500 104 12 1 2265 2367 664675827 664675724 4.910000e-23 119.0
13 TraesCS7D01G039700 chr7B 77.710 821 140 33 813 1627 740995114 740994331 1.970000e-126 462.0
14 TraesCS7D01G039700 chr7B 94.545 55 2 1 2265 2318 447707417 447707471 1.790000e-12 84.2
15 TraesCS7D01G039700 chrUn 81.481 378 62 7 851 1224 217850322 217849949 1.260000e-78 303.0
16 TraesCS7D01G039700 chrUn 81.481 378 62 7 851 1224 331471334 331470961 1.260000e-78 303.0
17 TraesCS7D01G039700 chr5A 74.827 723 149 27 814 1529 24418423 24417727 2.110000e-76 296.0
18 TraesCS7D01G039700 chr5A 92.593 54 3 1 2315 2368 55022473 55022421 3.000000e-10 76.8
19 TraesCS7D01G039700 chr5A 96.875 32 1 0 582 613 131645814 131645783 1.000000e-03 54.7
20 TraesCS7D01G039700 chr3A 79.481 424 78 9 808 1227 7500102 7499684 2.730000e-75 292.0
21 TraesCS7D01G039700 chr5B 77.688 372 79 4 849 1218 26879747 26879378 1.010000e-54 224.0
22 TraesCS7D01G039700 chr3D 77.064 436 68 25 798 1216 23612435 23612855 3.640000e-54 222.0
23 TraesCS7D01G039700 chr3D 100.000 30 0 0 631 660 364383254 364383283 3.900000e-04 56.5
24 TraesCS7D01G039700 chr5D 88.182 110 12 1 2261 2369 315929083 315928974 2.270000e-26 130.0
25 TraesCS7D01G039700 chr5D 86.486 111 13 2 2259 2367 37026083 37025973 1.360000e-23 121.0
26 TraesCS7D01G039700 chr5D 100.000 29 0 0 167 195 292155100 292155072 1.000000e-03 54.7
27 TraesCS7D01G039700 chr2B 74.919 307 65 8 1402 1702 778292810 778292510 2.270000e-26 130.0
28 TraesCS7D01G039700 chr2B 85.965 114 15 1 2262 2374 47775146 47775259 1.360000e-23 121.0
29 TraesCS7D01G039700 chr2B 100.000 33 0 0 588 620 114643064 114643032 8.390000e-06 62.1
30 TraesCS7D01G039700 chr1B 87.629 97 12 0 2571 2667 644543262 644543358 2.280000e-21 113.0
31 TraesCS7D01G039700 chr1B 83.193 119 14 6 2254 2368 666852482 666852598 1.370000e-18 104.0
32 TraesCS7D01G039700 chr4B 84.071 113 13 5 2262 2371 28196882 28196992 1.370000e-18 104.0
33 TraesCS7D01G039700 chr4B 94.118 51 3 0 2617 2667 60377975 60377925 8.330000e-11 78.7
34 TraesCS7D01G039700 chr4B 93.878 49 3 0 2619 2667 14489679 14489631 1.080000e-09 75.0
35 TraesCS7D01G039700 chr2A 82.456 114 15 5 2258 2368 68245774 68245885 8.270000e-16 95.3
36 TraesCS7D01G039700 chr2A 95.238 42 2 0 2601 2642 576655597 576655638 1.800000e-07 67.6
37 TraesCS7D01G039700 chr1A 83.516 91 14 1 2278 2368 389872111 389872200 1.790000e-12 84.2
38 TraesCS7D01G039700 chr4A 96.970 33 1 0 588 620 24504053 24504021 3.900000e-04 56.5
39 TraesCS7D01G039700 chr6A 92.308 39 2 1 621 659 142081444 142081407 1.000000e-03 54.7
40 TraesCS7D01G039700 chr4D 96.875 32 1 0 582 613 455013543 455013574 1.000000e-03 54.7
41 TraesCS7D01G039700 chr6B 96.875 32 0 1 579 609 641047823 641047854 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G039700 chr7D 20285132 20287935 2803 True 5179 5179 100.00000 1 2804 1 chr7D.!!$R1 2803
1 TraesCS7D01G039700 chr7D 20316750 20320759 4009 False 676 1705 87.53775 1 2512 4 chr7D.!!$F4 2511
2 TraesCS7D01G039700 chr7A 20433179 20437487 4308 False 905 1657 89.39500 1 2222 3 chr7A.!!$F1 2221
3 TraesCS7D01G039700 chr7B 740994331 740995114 783 True 462 462 77.71000 813 1627 1 chr7B.!!$R1 814
4 TraesCS7D01G039700 chr5A 24417727 24418423 696 True 296 296 74.82700 814 1529 1 chr5A.!!$R1 715

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 2612 0.40675 TGGAAGTACTCCCTCCGTCA 59.593 55.0 0.0 0.0 44.69 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 4646 2.170187 ACAGATTTGCAAACTTTGGCCA 59.83 40.909 15.41 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 7.015195 AGAGTTGCCCAGTTAATTAACACAAAT 59.985 33.333 26.06 21.38 38.62 2.32
122 123 7.598278 TGCCCAGTTAATTAACACAAATACAG 58.402 34.615 26.06 8.49 38.62 2.74
165 166 2.159382 CACAAAGATAGGCAACCGGTT 58.841 47.619 15.86 15.86 37.17 4.44
245 254 3.314357 ACAACTTTCTGAAAACCCGCTAC 59.686 43.478 4.18 0.00 0.00 3.58
494 508 4.464112 GTTGTTCTCCGCAAGAAATACAC 58.536 43.478 0.38 0.00 45.50 2.90
502 516 3.502211 CCGCAAGAAATACACTTGGAAGT 59.498 43.478 0.00 0.00 43.12 3.01
503 517 4.693566 CCGCAAGAAATACACTTGGAAGTA 59.306 41.667 0.00 0.00 43.12 2.24
505 519 5.408604 CGCAAGAAATACACTTGGAAGTACT 59.591 40.000 0.00 0.00 43.12 2.73
506 520 6.401153 CGCAAGAAATACACTTGGAAGTACTC 60.401 42.308 0.00 0.00 43.12 2.59
507 521 6.128254 GCAAGAAATACACTTGGAAGTACTCC 60.128 42.308 0.00 0.00 45.64 3.85
514 2611 1.477295 CTTGGAAGTACTCCCTCCGTC 59.523 57.143 0.00 0.00 44.69 4.79
515 2612 0.406750 TGGAAGTACTCCCTCCGTCA 59.593 55.000 0.00 0.00 44.69 4.35
523 2620 2.240279 ACTCCCTCCGTCATGTATAGC 58.760 52.381 0.00 0.00 0.00 2.97
601 2804 6.710278 AGTAATATAGTACTCCCTCCGTCTC 58.290 44.000 7.04 0.00 27.56 3.36
605 2808 3.947612 AGTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
606 2809 4.456662 AGTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
609 2812 6.181908 AGTACTCCCTCCGTCTCATAATATC 58.818 44.000 0.00 0.00 0.00 1.63
610 2813 4.999310 ACTCCCTCCGTCTCATAATATCA 58.001 43.478 0.00 0.00 0.00 2.15
611 2814 5.013547 ACTCCCTCCGTCTCATAATATCAG 58.986 45.833 0.00 0.00 0.00 2.90
613 2816 5.257262 TCCCTCCGTCTCATAATATCAGAG 58.743 45.833 0.00 0.00 0.00 3.35
617 2820 6.350864 CCTCCGTCTCATAATATCAGAGCATT 60.351 42.308 0.00 0.00 0.00 3.56
619 2822 7.445121 TCCGTCTCATAATATCAGAGCATTTT 58.555 34.615 0.00 0.00 0.00 1.82
633 2836 7.680730 TCAGAGCATTTTATATTACTCCCTCC 58.319 38.462 0.00 0.00 0.00 4.30
634 2837 7.292356 TCAGAGCATTTTATATTACTCCCTCCA 59.708 37.037 0.00 0.00 0.00 3.86
636 2839 8.105829 AGAGCATTTTATATTACTCCCTCCATG 58.894 37.037 0.00 0.00 0.00 3.66
637 2840 7.988937 AGCATTTTATATTACTCCCTCCATGA 58.011 34.615 0.00 0.00 0.00 3.07
638 2841 8.448008 AGCATTTTATATTACTCCCTCCATGAA 58.552 33.333 0.00 0.00 0.00 2.57
639 2842 8.734386 GCATTTTATATTACTCCCTCCATGAAG 58.266 37.037 0.00 0.00 0.00 3.02
650 2853 8.986929 ACTCCCTCCATGAAGAAATATAAAAG 57.013 34.615 0.00 0.00 0.00 2.27
651 2854 7.503902 ACTCCCTCCATGAAGAAATATAAAAGC 59.496 37.037 0.00 0.00 0.00 3.51
652 2855 6.486657 TCCCTCCATGAAGAAATATAAAAGCG 59.513 38.462 0.00 0.00 0.00 4.68
653 2856 6.263168 CCCTCCATGAAGAAATATAAAAGCGT 59.737 38.462 0.00 0.00 0.00 5.07
655 2858 8.190784 CCTCCATGAAGAAATATAAAAGCGTTT 58.809 33.333 2.53 2.53 0.00 3.60
693 2983 5.536916 CGGAGGGAGTATCTATCACTTTTCT 59.463 44.000 0.00 0.00 28.03 2.52
705 2995 7.437748 TCTATCACTTTTCTATCAAGCTAGGC 58.562 38.462 0.00 0.00 0.00 3.93
1092 3383 2.262915 CTCAGCGACGCCTTCCTT 59.737 61.111 17.79 0.00 0.00 3.36
1711 4044 6.936968 AGGACAAGAGGTACATCTACTTTT 57.063 37.500 10.98 0.00 30.17 2.27
1768 4185 6.441274 ACTTTGATCGCCAATGCATATTTAG 58.559 36.000 0.00 0.00 37.32 1.85
1777 4194 4.038282 CCAATGCATATTTAGAGCTGCCAA 59.962 41.667 0.00 0.00 33.70 4.52
1778 4195 5.452216 CCAATGCATATTTAGAGCTGCCAAA 60.452 40.000 0.00 0.00 33.70 3.28
1797 4214 5.564848 GCCAAAAGTACTTCCTCCATTTGAC 60.565 44.000 8.95 0.00 0.00 3.18
1806 4223 5.964477 ACTTCCTCCATTTGACCTATAGTGA 59.036 40.000 0.00 0.00 0.00 3.41
1811 4239 8.998814 TCCTCCATTTGACCTATAGTGATTTTA 58.001 33.333 0.00 0.00 0.00 1.52
1979 4407 9.491675 TCTAAACACTTGGTCATAATTTACGAA 57.508 29.630 0.00 0.00 0.00 3.85
1981 4409 6.737254 ACACTTGGTCATAATTTACGAAGG 57.263 37.500 11.76 6.24 36.20 3.46
1986 4414 7.446013 ACTTGGTCATAATTTACGAAGGTTGAA 59.554 33.333 11.76 0.00 36.20 2.69
1990 4433 9.634163 GGTCATAATTTACGAAGGTTGAATTTT 57.366 29.630 0.00 0.00 0.00 1.82
2003 4446 9.974980 GAAGGTTGAATTTTATAAGAACACCAA 57.025 29.630 0.00 0.00 0.00 3.67
2009 4452 8.363390 TGAATTTTATAAGAACACCAATGTGCA 58.637 29.630 0.00 0.00 46.86 4.57
2021 4464 3.196901 ACCAATGTGCATAGTTCTCCGTA 59.803 43.478 0.00 0.00 0.00 4.02
2023 4466 4.449068 CCAATGTGCATAGTTCTCCGTATC 59.551 45.833 0.00 0.00 0.00 2.24
2028 4471 3.878699 TGCATAGTTCTCCGTATCGTACA 59.121 43.478 0.00 0.00 0.00 2.90
2030 4473 4.024218 GCATAGTTCTCCGTATCGTACACT 60.024 45.833 0.00 0.00 0.00 3.55
2036 4479 4.615949 TCTCCGTATCGTACACTCTCTAC 58.384 47.826 0.00 0.00 0.00 2.59
2037 4480 4.098501 TCTCCGTATCGTACACTCTCTACA 59.901 45.833 0.00 0.00 0.00 2.74
2038 4481 4.953667 TCCGTATCGTACACTCTCTACAT 58.046 43.478 0.00 0.00 0.00 2.29
2041 4484 5.925397 CCGTATCGTACACTCTCTACATACT 59.075 44.000 0.00 0.00 0.00 2.12
2042 4485 6.089283 CCGTATCGTACACTCTCTACATACTC 59.911 46.154 0.00 0.00 0.00 2.59
2043 4486 6.862608 CGTATCGTACACTCTCTACATACTCT 59.137 42.308 0.00 0.00 0.00 3.24
2044 4487 7.060979 CGTATCGTACACTCTCTACATACTCTC 59.939 44.444 0.00 0.00 0.00 3.20
2045 4488 6.468333 TCGTACACTCTCTACATACTCTCT 57.532 41.667 0.00 0.00 0.00 3.10
2046 4489 7.579761 TCGTACACTCTCTACATACTCTCTA 57.420 40.000 0.00 0.00 0.00 2.43
2047 4490 8.180706 TCGTACACTCTCTACATACTCTCTAT 57.819 38.462 0.00 0.00 0.00 1.98
2048 4491 8.298854 TCGTACACTCTCTACATACTCTCTATC 58.701 40.741 0.00 0.00 0.00 2.08
2049 4492 7.543172 CGTACACTCTCTACATACTCTCTATCC 59.457 44.444 0.00 0.00 0.00 2.59
2050 4493 7.381789 ACACTCTCTACATACTCTCTATCCA 57.618 40.000 0.00 0.00 0.00 3.41
2051 4494 7.984475 ACACTCTCTACATACTCTCTATCCAT 58.016 38.462 0.00 0.00 0.00 3.41
2052 4495 9.106977 ACACTCTCTACATACTCTCTATCCATA 57.893 37.037 0.00 0.00 0.00 2.74
2094 4537 8.641499 TTTTTACAAAACTCAAGCAATGTAGG 57.359 30.769 0.00 0.00 0.00 3.18
2101 4544 4.469657 ACTCAAGCAATGTAGGGTTTGAA 58.530 39.130 0.00 0.00 34.55 2.69
2210 4674 2.836262 TGGCCAAAGTTTGCAAATCTG 58.164 42.857 16.21 12.29 0.00 2.90
2211 4675 2.170187 TGGCCAAAGTTTGCAAATCTGT 59.830 40.909 16.21 6.87 0.00 3.41
2263 4758 9.974750 GCATCTTAAAACAGAGAAAGTATGTAC 57.025 33.333 0.00 0.00 0.00 2.90
2266 4761 9.924650 TCTTAAAACAGAGAAAGTATGTACTCC 57.075 33.333 0.00 0.00 34.99 3.85
2267 4762 9.152595 CTTAAAACAGAGAAAGTATGTACTCCC 57.847 37.037 0.00 0.00 34.99 4.30
2268 4763 5.678955 AACAGAGAAAGTATGTACTCCCC 57.321 43.478 0.00 0.00 34.99 4.81
2269 4764 4.031611 ACAGAGAAAGTATGTACTCCCCC 58.968 47.826 0.00 0.00 34.99 5.40
2270 4765 3.068307 CAGAGAAAGTATGTACTCCCCCG 59.932 52.174 0.00 0.00 34.99 5.73
2271 4766 3.053095 AGAGAAAGTATGTACTCCCCCGA 60.053 47.826 0.00 0.00 34.99 5.14
2272 4767 3.896272 GAGAAAGTATGTACTCCCCCGAT 59.104 47.826 0.00 0.00 34.99 4.18
2273 4768 3.896272 AGAAAGTATGTACTCCCCCGATC 59.104 47.826 0.00 0.00 34.99 3.69
2274 4769 2.305858 AGTATGTACTCCCCCGATCC 57.694 55.000 0.00 0.00 0.00 3.36
2275 4770 1.502039 AGTATGTACTCCCCCGATCCA 59.498 52.381 0.00 0.00 0.00 3.41
2276 4771 2.111972 AGTATGTACTCCCCCGATCCAT 59.888 50.000 0.00 0.00 0.00 3.41
2277 4772 3.335786 AGTATGTACTCCCCCGATCCATA 59.664 47.826 0.00 0.00 0.00 2.74
2278 4773 3.491766 ATGTACTCCCCCGATCCATAT 57.508 47.619 0.00 0.00 0.00 1.78
2279 4774 3.269592 TGTACTCCCCCGATCCATATT 57.730 47.619 0.00 0.00 0.00 1.28
2280 4775 4.407329 TGTACTCCCCCGATCCATATTA 57.593 45.455 0.00 0.00 0.00 0.98
2281 4776 4.955335 TGTACTCCCCCGATCCATATTAT 58.045 43.478 0.00 0.00 0.00 1.28
2282 4777 5.347124 TGTACTCCCCCGATCCATATTATT 58.653 41.667 0.00 0.00 0.00 1.40
2283 4778 5.788533 TGTACTCCCCCGATCCATATTATTT 59.211 40.000 0.00 0.00 0.00 1.40
2284 4779 5.179452 ACTCCCCCGATCCATATTATTTG 57.821 43.478 0.00 0.00 0.00 2.32
2285 4780 4.601857 ACTCCCCCGATCCATATTATTTGT 59.398 41.667 0.00 0.00 0.00 2.83
2286 4781 5.174037 TCCCCCGATCCATATTATTTGTC 57.826 43.478 0.00 0.00 0.00 3.18
2287 4782 3.938963 CCCCCGATCCATATTATTTGTCG 59.061 47.826 0.00 0.00 0.00 4.35
2288 4783 3.374058 CCCCGATCCATATTATTTGTCGC 59.626 47.826 0.00 0.00 0.00 5.19
2289 4784 4.253685 CCCGATCCATATTATTTGTCGCT 58.746 43.478 0.00 0.00 0.00 4.93
2290 4785 4.330074 CCCGATCCATATTATTTGTCGCTC 59.670 45.833 0.00 0.00 0.00 5.03
2291 4786 4.929211 CCGATCCATATTATTTGTCGCTCA 59.071 41.667 0.00 0.00 0.00 4.26
2292 4787 5.408299 CCGATCCATATTATTTGTCGCTCAA 59.592 40.000 0.00 0.00 0.00 3.02
2294 4789 6.792250 CGATCCATATTATTTGTCGCTCAAAC 59.208 38.462 7.52 0.00 46.77 2.93
2295 4790 6.993786 TCCATATTATTTGTCGCTCAAACA 57.006 33.333 7.52 0.00 46.77 2.83
2296 4791 7.015226 TCCATATTATTTGTCGCTCAAACAG 57.985 36.000 7.52 0.00 46.77 3.16
2297 4792 6.821160 TCCATATTATTTGTCGCTCAAACAGA 59.179 34.615 7.52 0.00 46.77 3.41
2298 4793 7.498900 TCCATATTATTTGTCGCTCAAACAGAT 59.501 33.333 7.52 0.00 46.77 2.90
2299 4794 7.588854 CCATATTATTTGTCGCTCAAACAGATG 59.411 37.037 7.52 9.48 46.77 2.90
2300 4795 5.940192 TTATTTGTCGCTCAAACAGATGT 57.060 34.783 7.52 0.00 46.77 3.06
2301 4796 7.609760 ATTATTTGTCGCTCAAACAGATGTA 57.390 32.000 7.52 0.00 46.77 2.29
2302 4797 7.609760 TTATTTGTCGCTCAAACAGATGTAT 57.390 32.000 7.52 0.00 46.77 2.29
2303 4798 5.530519 TTTGTCGCTCAAACAGATGTATC 57.469 39.130 2.42 0.00 40.56 2.24
2304 4799 4.456280 TGTCGCTCAAACAGATGTATCT 57.544 40.909 0.00 0.00 37.72 1.98
2305 4800 5.576447 TGTCGCTCAAACAGATGTATCTA 57.424 39.130 0.00 0.00 34.85 1.98
2306 4801 5.582550 TGTCGCTCAAACAGATGTATCTAG 58.417 41.667 0.00 0.00 34.85 2.43
2307 4802 5.357032 TGTCGCTCAAACAGATGTATCTAGA 59.643 40.000 0.00 0.00 34.85 2.43
2308 4803 5.683743 GTCGCTCAAACAGATGTATCTAGAC 59.316 44.000 0.00 0.00 34.85 2.59
2309 4804 4.672862 CGCTCAAACAGATGTATCTAGACG 59.327 45.833 0.00 0.00 34.85 4.18
2310 4805 5.583495 GCTCAAACAGATGTATCTAGACGT 58.417 41.667 0.00 0.00 34.85 4.34
2311 4806 6.037098 GCTCAAACAGATGTATCTAGACGTT 58.963 40.000 0.00 0.00 34.85 3.99
2312 4807 6.531948 GCTCAAACAGATGTATCTAGACGTTT 59.468 38.462 0.00 0.00 34.85 3.60
2313 4808 7.063544 GCTCAAACAGATGTATCTAGACGTTTT 59.936 37.037 0.00 0.00 34.85 2.43
2314 4809 8.827177 TCAAACAGATGTATCTAGACGTTTTT 57.173 30.769 0.00 0.00 34.85 1.94
2315 4810 8.922676 TCAAACAGATGTATCTAGACGTTTTTC 58.077 33.333 0.00 0.00 34.85 2.29
2316 4811 8.708742 CAAACAGATGTATCTAGACGTTTTTCA 58.291 33.333 0.00 0.00 34.85 2.69
2317 4812 8.467402 AACAGATGTATCTAGACGTTTTTCAG 57.533 34.615 0.00 0.00 34.85 3.02
2318 4813 7.603651 ACAGATGTATCTAGACGTTTTTCAGT 58.396 34.615 0.00 0.00 34.85 3.41
2319 4814 7.542477 ACAGATGTATCTAGACGTTTTTCAGTG 59.458 37.037 0.00 0.00 34.85 3.66
2320 4815 6.531948 AGATGTATCTAGACGTTTTTCAGTGC 59.468 38.462 0.00 0.00 34.85 4.40
2321 4816 5.779922 TGTATCTAGACGTTTTTCAGTGCT 58.220 37.500 0.00 0.00 0.00 4.40
2322 4817 6.916440 TGTATCTAGACGTTTTTCAGTGCTA 58.084 36.000 0.00 0.00 0.00 3.49
2323 4818 7.027760 TGTATCTAGACGTTTTTCAGTGCTAG 58.972 38.462 0.00 0.00 0.00 3.42
2324 4819 5.700722 TCTAGACGTTTTTCAGTGCTAGA 57.299 39.130 0.00 0.00 32.77 2.43
2325 4820 6.268825 TCTAGACGTTTTTCAGTGCTAGAT 57.731 37.500 0.00 0.00 30.90 1.98
2326 4821 7.387119 TCTAGACGTTTTTCAGTGCTAGATA 57.613 36.000 0.00 0.00 30.90 1.98
2327 4822 7.997482 TCTAGACGTTTTTCAGTGCTAGATAT 58.003 34.615 0.00 0.00 30.90 1.63
2328 4823 9.117183 TCTAGACGTTTTTCAGTGCTAGATATA 57.883 33.333 0.00 0.00 30.90 0.86
2329 4824 9.900710 CTAGACGTTTTTCAGTGCTAGATATAT 57.099 33.333 0.00 0.00 0.00 0.86
2330 4825 8.804688 AGACGTTTTTCAGTGCTAGATATATC 57.195 34.615 4.42 4.42 0.00 1.63
2331 4826 7.868415 AGACGTTTTTCAGTGCTAGATATATCC 59.132 37.037 9.18 0.00 0.00 2.59
2332 4827 7.497595 ACGTTTTTCAGTGCTAGATATATCCA 58.502 34.615 9.18 0.00 0.00 3.41
2333 4828 8.150945 ACGTTTTTCAGTGCTAGATATATCCAT 58.849 33.333 9.18 0.00 0.00 3.41
2334 4829 8.993121 CGTTTTTCAGTGCTAGATATATCCATT 58.007 33.333 9.18 0.00 0.00 3.16
2338 4833 9.716531 TTTCAGTGCTAGATATATCCATTTGAG 57.283 33.333 9.18 0.00 0.00 3.02
2339 4834 8.655935 TCAGTGCTAGATATATCCATTTGAGA 57.344 34.615 9.18 0.00 0.00 3.27
2340 4835 8.747471 TCAGTGCTAGATATATCCATTTGAGAG 58.253 37.037 9.18 0.00 0.00 3.20
2341 4836 8.747471 CAGTGCTAGATATATCCATTTGAGAGA 58.253 37.037 9.18 0.00 0.00 3.10
2342 4837 8.748412 AGTGCTAGATATATCCATTTGAGAGAC 58.252 37.037 9.18 0.31 0.00 3.36
2343 4838 8.526978 GTGCTAGATATATCCATTTGAGAGACA 58.473 37.037 9.18 0.00 0.00 3.41
2344 4839 9.093458 TGCTAGATATATCCATTTGAGAGACAA 57.907 33.333 9.18 0.00 36.65 3.18
2345 4840 9.585099 GCTAGATATATCCATTTGAGAGACAAG 57.415 37.037 9.18 0.00 39.77 3.16
2353 4848 8.915057 ATCCATTTGAGAGACAAGTAATATGG 57.085 34.615 0.00 0.00 40.44 2.74
2354 4849 8.089625 TCCATTTGAGAGACAAGTAATATGGA 57.910 34.615 0.00 0.00 43.06 3.41
2355 4850 8.717717 TCCATTTGAGAGACAAGTAATATGGAT 58.282 33.333 0.00 0.00 41.73 3.41
2356 4851 9.347240 CCATTTGAGAGACAAGTAATATGGATT 57.653 33.333 0.00 0.00 41.04 3.01
2358 4853 8.737168 TTTGAGAGACAAGTAATATGGATTGG 57.263 34.615 0.00 0.00 39.77 3.16
2359 4854 7.675161 TGAGAGACAAGTAATATGGATTGGA 57.325 36.000 0.00 0.00 0.00 3.53
2360 4855 7.730084 TGAGAGACAAGTAATATGGATTGGAG 58.270 38.462 0.00 0.00 0.00 3.86
2361 4856 7.072263 AGAGACAAGTAATATGGATTGGAGG 57.928 40.000 0.00 0.00 0.00 4.30
2362 4857 6.043706 AGAGACAAGTAATATGGATTGGAGGG 59.956 42.308 0.00 0.00 0.00 4.30
2363 4858 5.911178 AGACAAGTAATATGGATTGGAGGGA 59.089 40.000 0.00 0.00 0.00 4.20
2364 4859 6.043706 AGACAAGTAATATGGATTGGAGGGAG 59.956 42.308 0.00 0.00 0.00 4.30
2365 4860 5.672194 ACAAGTAATATGGATTGGAGGGAGT 59.328 40.000 0.00 0.00 0.00 3.85
2366 4861 6.849697 ACAAGTAATATGGATTGGAGGGAGTA 59.150 38.462 0.00 0.00 0.00 2.59
2410 4905 8.823220 ATATTTTAGGAGTACAGTGGCAATTT 57.177 30.769 0.00 0.00 0.00 1.82
2411 4906 5.957842 TTTAGGAGTACAGTGGCAATTTG 57.042 39.130 0.00 0.00 0.00 2.32
2414 4909 4.980573 AGGAGTACAGTGGCAATTTGTAA 58.019 39.130 8.70 0.00 0.00 2.41
2416 4911 5.415701 AGGAGTACAGTGGCAATTTGTAATG 59.584 40.000 11.15 0.77 0.00 1.90
2466 5001 5.487433 TCAATCATATGTCGTGTTTGACCT 58.513 37.500 1.90 0.00 38.11 3.85
2522 5057 9.726438 ATTATATATAGAGCCAAACAACACCTC 57.274 33.333 0.00 0.00 0.00 3.85
2523 5058 3.788227 ATAGAGCCAAACAACACCTCA 57.212 42.857 0.00 0.00 0.00 3.86
2524 5059 1.972872 AGAGCCAAACAACACCTCAG 58.027 50.000 0.00 0.00 0.00 3.35
2525 5060 1.212935 AGAGCCAAACAACACCTCAGT 59.787 47.619 0.00 0.00 0.00 3.41
2526 5061 2.024414 GAGCCAAACAACACCTCAGTT 58.976 47.619 0.00 0.00 0.00 3.16
2527 5062 2.427095 GAGCCAAACAACACCTCAGTTT 59.573 45.455 0.00 0.00 36.00 2.66
2528 5063 2.831526 AGCCAAACAACACCTCAGTTTT 59.168 40.909 0.00 0.00 33.54 2.43
2529 5064 3.260632 AGCCAAACAACACCTCAGTTTTT 59.739 39.130 0.00 0.00 33.54 1.94
2553 5088 8.597662 TTTTGTTTACATGTACTACTCACTCC 57.402 34.615 4.68 0.00 0.00 3.85
2554 5089 6.904463 TGTTTACATGTACTACTCACTCCA 57.096 37.500 4.68 0.00 0.00 3.86
2555 5090 7.476540 TGTTTACATGTACTACTCACTCCAT 57.523 36.000 4.68 0.00 0.00 3.41
2556 5091 7.903145 TGTTTACATGTACTACTCACTCCATT 58.097 34.615 4.68 0.00 0.00 3.16
2557 5092 8.033038 TGTTTACATGTACTACTCACTCCATTC 58.967 37.037 4.68 0.00 0.00 2.67
2558 5093 5.599999 ACATGTACTACTCACTCCATTCC 57.400 43.478 0.00 0.00 0.00 3.01
2559 5094 5.023452 ACATGTACTACTCACTCCATTCCA 58.977 41.667 0.00 0.00 0.00 3.53
2560 5095 5.663106 ACATGTACTACTCACTCCATTCCAT 59.337 40.000 0.00 0.00 0.00 3.41
2561 5096 6.839134 ACATGTACTACTCACTCCATTCCATA 59.161 38.462 0.00 0.00 0.00 2.74
2562 5097 7.510685 ACATGTACTACTCACTCCATTCCATAT 59.489 37.037 0.00 0.00 0.00 1.78
2563 5098 7.914427 TGTACTACTCACTCCATTCCATATT 57.086 36.000 0.00 0.00 0.00 1.28
2564 5099 9.601810 ATGTACTACTCACTCCATTCCATATTA 57.398 33.333 0.00 0.00 0.00 0.98
2565 5100 9.429109 TGTACTACTCACTCCATTCCATATTAA 57.571 33.333 0.00 0.00 0.00 1.40
2568 5103 9.213777 ACTACTCACTCCATTCCATATTAAAGA 57.786 33.333 0.00 0.00 0.00 2.52
2569 5104 9.703892 CTACTCACTCCATTCCATATTAAAGAG 57.296 37.037 0.00 0.00 0.00 2.85
2570 5105 6.995091 ACTCACTCCATTCCATATTAAAGAGC 59.005 38.462 0.00 0.00 0.00 4.09
2571 5106 6.899089 TCACTCCATTCCATATTAAAGAGCA 58.101 36.000 0.00 0.00 0.00 4.26
2572 5107 6.767902 TCACTCCATTCCATATTAAAGAGCAC 59.232 38.462 0.00 0.00 0.00 4.40
2573 5108 6.769822 CACTCCATTCCATATTAAAGAGCACT 59.230 38.462 0.00 0.00 0.00 4.40
2574 5109 7.933577 CACTCCATTCCATATTAAAGAGCACTA 59.066 37.037 0.00 0.00 0.00 2.74
2575 5110 8.153550 ACTCCATTCCATATTAAAGAGCACTAG 58.846 37.037 0.00 0.00 0.00 2.57
2576 5111 8.034313 TCCATTCCATATTAAAGAGCACTAGT 57.966 34.615 0.00 0.00 0.00 2.57
2577 5112 7.933577 TCCATTCCATATTAAAGAGCACTAGTG 59.066 37.037 18.93 18.93 0.00 2.74
2578 5113 7.173907 CCATTCCATATTAAAGAGCACTAGTGG 59.826 40.741 23.95 6.49 0.00 4.00
2579 5114 5.611374 TCCATATTAAAGAGCACTAGTGGC 58.389 41.667 23.95 15.67 0.00 5.01
2580 5115 5.366768 TCCATATTAAAGAGCACTAGTGGCT 59.633 40.000 23.95 19.83 46.07 4.75
2581 5116 5.468072 CCATATTAAAGAGCACTAGTGGCTG 59.532 44.000 23.95 0.00 42.78 4.85
2582 5117 3.334583 TTAAAGAGCACTAGTGGCTGG 57.665 47.619 23.95 0.00 42.78 4.85
2583 5118 0.326264 AAAGAGCACTAGTGGCTGGG 59.674 55.000 23.95 0.00 42.78 4.45
2584 5119 1.557269 AAGAGCACTAGTGGCTGGGG 61.557 60.000 23.95 0.00 42.78 4.96
2585 5120 2.203998 AGCACTAGTGGCTGGGGT 60.204 61.111 23.95 0.00 40.80 4.95
2586 5121 2.045926 GCACTAGTGGCTGGGGTG 60.046 66.667 23.95 0.00 0.00 4.61
2587 5122 2.045926 CACTAGTGGCTGGGGTGC 60.046 66.667 15.49 0.00 0.00 5.01
2588 5123 3.706373 ACTAGTGGCTGGGGTGCG 61.706 66.667 0.00 0.00 0.00 5.34
2608 5143 4.148825 CCGGGCGGACCTCTTGAG 62.149 72.222 0.00 0.00 37.50 3.02
2609 5144 4.148825 CGGGCGGACCTCTTGAGG 62.149 72.222 14.58 14.58 36.97 3.86
2610 5145 4.475135 GGGCGGACCTCTTGAGGC 62.475 72.222 15.93 9.07 35.85 4.70
2611 5146 3.706373 GGCGGACCTCTTGAGGCA 61.706 66.667 15.93 0.00 0.00 4.75
2612 5147 2.125350 GCGGACCTCTTGAGGCAG 60.125 66.667 15.93 10.59 0.00 4.85
2613 5148 2.948720 GCGGACCTCTTGAGGCAGT 61.949 63.158 15.93 0.00 0.00 4.40
2614 5149 1.605058 GCGGACCTCTTGAGGCAGTA 61.605 60.000 15.93 0.00 0.00 2.74
2615 5150 1.115467 CGGACCTCTTGAGGCAGTAT 58.885 55.000 15.93 0.00 0.00 2.12
2616 5151 1.482593 CGGACCTCTTGAGGCAGTATT 59.517 52.381 15.93 0.00 0.00 1.89
2617 5152 2.739932 CGGACCTCTTGAGGCAGTATTG 60.740 54.545 15.93 0.00 0.00 1.90
2618 5153 2.237392 GGACCTCTTGAGGCAGTATTGT 59.763 50.000 15.93 0.00 0.00 2.71
2619 5154 3.265791 GACCTCTTGAGGCAGTATTGTG 58.734 50.000 15.93 0.00 0.00 3.33
2620 5155 2.012673 CCTCTTGAGGCAGTATTGTGC 58.987 52.381 3.51 0.00 43.19 4.57
2621 5156 1.662629 CTCTTGAGGCAGTATTGTGCG 59.337 52.381 0.00 0.00 45.00 5.34
2622 5157 0.097674 CTTGAGGCAGTATTGTGCGC 59.902 55.000 0.00 0.00 45.00 6.09
2623 5158 0.605050 TTGAGGCAGTATTGTGCGCA 60.605 50.000 5.66 5.66 45.00 6.09
2624 5159 1.298157 TGAGGCAGTATTGTGCGCAC 61.298 55.000 33.11 33.11 45.00 5.34
2625 5160 1.003355 AGGCAGTATTGTGCGCACT 60.003 52.632 37.59 23.28 45.00 4.40
2626 5161 0.249120 AGGCAGTATTGTGCGCACTA 59.751 50.000 37.59 32.01 45.00 2.74
2627 5162 1.083489 GGCAGTATTGTGCGCACTAA 58.917 50.000 37.59 28.83 45.00 2.24
2628 5163 1.670811 GGCAGTATTGTGCGCACTAAT 59.329 47.619 37.59 32.10 45.00 1.73
2629 5164 2.286418 GGCAGTATTGTGCGCACTAATC 60.286 50.000 37.59 25.80 45.00 1.75
2630 5165 2.351418 GCAGTATTGTGCGCACTAATCA 59.649 45.455 37.59 17.66 32.74 2.57
2631 5166 3.181511 GCAGTATTGTGCGCACTAATCAA 60.182 43.478 37.59 24.86 32.74 2.57
2632 5167 4.581493 CAGTATTGTGCGCACTAATCAAG 58.419 43.478 37.59 21.85 0.00 3.02
2633 5168 4.093408 CAGTATTGTGCGCACTAATCAAGT 59.907 41.667 37.59 20.48 39.81 3.16
2634 5169 4.695455 AGTATTGTGCGCACTAATCAAGTT 59.305 37.500 37.59 17.96 35.76 2.66
2635 5170 2.967459 TGTGCGCACTAATCAAGTTG 57.033 45.000 37.59 0.00 35.76 3.16
2636 5171 2.217750 TGTGCGCACTAATCAAGTTGT 58.782 42.857 37.59 0.00 35.76 3.32
2637 5172 2.223144 TGTGCGCACTAATCAAGTTGTC 59.777 45.455 37.59 9.94 35.76 3.18
2638 5173 1.459209 TGCGCACTAATCAAGTTGTCG 59.541 47.619 5.66 0.00 35.76 4.35
2639 5174 1.459592 GCGCACTAATCAAGTTGTCGT 59.540 47.619 0.30 0.00 35.76 4.34
2640 5175 2.664568 GCGCACTAATCAAGTTGTCGTA 59.335 45.455 0.30 0.00 35.76 3.43
2641 5176 3.241678 GCGCACTAATCAAGTTGTCGTAG 60.242 47.826 0.30 5.86 35.76 3.51
2642 5177 3.918591 CGCACTAATCAAGTTGTCGTAGT 59.081 43.478 2.11 6.44 35.76 2.73
2643 5178 4.384846 CGCACTAATCAAGTTGTCGTAGTT 59.615 41.667 2.11 0.00 35.76 2.24
2644 5179 5.609088 GCACTAATCAAGTTGTCGTAGTTG 58.391 41.667 2.11 5.90 35.76 3.16
2645 5180 5.176958 GCACTAATCAAGTTGTCGTAGTTGT 59.823 40.000 2.11 0.00 35.76 3.32
2646 5181 6.292703 GCACTAATCAAGTTGTCGTAGTTGTT 60.293 38.462 2.11 0.00 35.76 2.83
2647 5182 7.095940 GCACTAATCAAGTTGTCGTAGTTGTTA 60.096 37.037 2.11 0.00 35.76 2.41
2648 5183 8.757789 CACTAATCAAGTTGTCGTAGTTGTTAA 58.242 33.333 2.11 0.00 35.76 2.01
2649 5184 9.485206 ACTAATCAAGTTGTCGTAGTTGTTAAT 57.515 29.630 2.11 0.00 33.35 1.40
2650 5185 9.741168 CTAATCAAGTTGTCGTAGTTGTTAATG 57.259 33.333 2.11 0.00 31.75 1.90
2651 5186 7.724305 ATCAAGTTGTCGTAGTTGTTAATGT 57.276 32.000 2.11 0.00 31.75 2.71
2652 5187 6.939627 TCAAGTTGTCGTAGTTGTTAATGTG 58.060 36.000 2.11 0.00 31.75 3.21
2653 5188 6.535865 TCAAGTTGTCGTAGTTGTTAATGTGT 59.464 34.615 2.11 0.00 31.75 3.72
2654 5189 6.913873 AGTTGTCGTAGTTGTTAATGTGTT 57.086 33.333 0.00 0.00 0.00 3.32
2655 5190 6.711579 AGTTGTCGTAGTTGTTAATGTGTTG 58.288 36.000 0.00 0.00 0.00 3.33
2656 5191 6.535865 AGTTGTCGTAGTTGTTAATGTGTTGA 59.464 34.615 0.00 0.00 0.00 3.18
2657 5192 6.276611 TGTCGTAGTTGTTAATGTGTTGAC 57.723 37.500 0.00 0.00 0.00 3.18
2658 5193 5.811100 TGTCGTAGTTGTTAATGTGTTGACA 59.189 36.000 0.00 0.00 36.22 3.58
2659 5194 6.019398 TGTCGTAGTTGTTAATGTGTTGACAG 60.019 38.462 0.00 0.00 35.57 3.51
2660 5195 6.019318 GTCGTAGTTGTTAATGTGTTGACAGT 60.019 38.462 0.00 0.00 35.57 3.55
2661 5196 6.019398 TCGTAGTTGTTAATGTGTTGACAGTG 60.019 38.462 0.00 0.00 35.57 3.66
2662 5197 4.920376 AGTTGTTAATGTGTTGACAGTGC 58.080 39.130 0.00 0.00 35.57 4.40
2663 5198 4.397730 AGTTGTTAATGTGTTGACAGTGCA 59.602 37.500 0.00 0.00 35.57 4.57
2664 5199 4.550577 TGTTAATGTGTTGACAGTGCAG 57.449 40.909 0.00 0.00 34.87 4.41
2665 5200 4.195416 TGTTAATGTGTTGACAGTGCAGA 58.805 39.130 0.00 0.00 34.87 4.26
2666 5201 4.821260 TGTTAATGTGTTGACAGTGCAGAT 59.179 37.500 0.00 0.00 34.87 2.90
2667 5202 5.299028 TGTTAATGTGTTGACAGTGCAGATT 59.701 36.000 0.00 0.00 34.87 2.40
2668 5203 3.909776 ATGTGTTGACAGTGCAGATTG 57.090 42.857 0.00 0.00 34.87 2.67
2669 5204 2.916640 TGTGTTGACAGTGCAGATTGA 58.083 42.857 0.00 0.00 0.00 2.57
2670 5205 2.613595 TGTGTTGACAGTGCAGATTGAC 59.386 45.455 0.00 0.00 0.00 3.18
2671 5206 1.866601 TGTTGACAGTGCAGATTGACG 59.133 47.619 0.00 0.00 0.00 4.35
2672 5207 2.135139 GTTGACAGTGCAGATTGACGA 58.865 47.619 0.00 0.00 0.00 4.20
2673 5208 2.738846 GTTGACAGTGCAGATTGACGAT 59.261 45.455 0.00 0.00 0.00 3.73
2674 5209 2.340337 TGACAGTGCAGATTGACGATG 58.660 47.619 0.00 0.00 0.00 3.84
2675 5210 1.662629 GACAGTGCAGATTGACGATGG 59.337 52.381 0.00 0.00 0.00 3.51
2676 5211 1.002430 ACAGTGCAGATTGACGATGGT 59.998 47.619 0.00 0.00 0.00 3.55
2677 5212 2.079158 CAGTGCAGATTGACGATGGTT 58.921 47.619 0.00 0.00 0.00 3.67
2678 5213 2.485426 CAGTGCAGATTGACGATGGTTT 59.515 45.455 0.00 0.00 0.00 3.27
2679 5214 2.485426 AGTGCAGATTGACGATGGTTTG 59.515 45.455 0.00 0.00 0.00 2.93
2680 5215 2.226437 GTGCAGATTGACGATGGTTTGT 59.774 45.455 0.00 0.00 0.00 2.83
2681 5216 3.435327 GTGCAGATTGACGATGGTTTGTA 59.565 43.478 0.00 0.00 0.00 2.41
2682 5217 4.068599 TGCAGATTGACGATGGTTTGTAA 58.931 39.130 0.00 0.00 0.00 2.41
2683 5218 4.699735 TGCAGATTGACGATGGTTTGTAAT 59.300 37.500 0.00 0.00 0.00 1.89
2684 5219 5.182950 TGCAGATTGACGATGGTTTGTAATT 59.817 36.000 0.00 0.00 0.00 1.40
2685 5220 6.092748 GCAGATTGACGATGGTTTGTAATTT 58.907 36.000 0.00 0.00 0.00 1.82
2686 5221 6.586082 GCAGATTGACGATGGTTTGTAATTTT 59.414 34.615 0.00 0.00 0.00 1.82
2687 5222 7.201350 GCAGATTGACGATGGTTTGTAATTTTC 60.201 37.037 0.00 0.00 0.00 2.29
2688 5223 8.023128 CAGATTGACGATGGTTTGTAATTTTCT 58.977 33.333 0.00 0.00 0.00 2.52
2689 5224 8.023128 AGATTGACGATGGTTTGTAATTTTCTG 58.977 33.333 0.00 0.00 0.00 3.02
2690 5225 6.627395 TGACGATGGTTTGTAATTTTCTGT 57.373 33.333 0.00 0.00 0.00 3.41
2691 5226 7.033530 TGACGATGGTTTGTAATTTTCTGTT 57.966 32.000 0.00 0.00 0.00 3.16
2692 5227 7.484975 TGACGATGGTTTGTAATTTTCTGTTT 58.515 30.769 0.00 0.00 0.00 2.83
2693 5228 7.976734 TGACGATGGTTTGTAATTTTCTGTTTT 59.023 29.630 0.00 0.00 0.00 2.43
2694 5229 8.710835 ACGATGGTTTGTAATTTTCTGTTTTT 57.289 26.923 0.00 0.00 0.00 1.94
2695 5230 8.813282 ACGATGGTTTGTAATTTTCTGTTTTTC 58.187 29.630 0.00 0.00 0.00 2.29
2696 5231 9.030301 CGATGGTTTGTAATTTTCTGTTTTTCT 57.970 29.630 0.00 0.00 0.00 2.52
2698 5233 7.969314 TGGTTTGTAATTTTCTGTTTTTCTGC 58.031 30.769 0.00 0.00 0.00 4.26
2699 5234 7.604164 TGGTTTGTAATTTTCTGTTTTTCTGCA 59.396 29.630 0.00 0.00 0.00 4.41
2700 5235 8.447053 GGTTTGTAATTTTCTGTTTTTCTGCAA 58.553 29.630 0.00 0.00 0.00 4.08
2701 5236 9.986833 GTTTGTAATTTTCTGTTTTTCTGCAAT 57.013 25.926 0.00 0.00 0.00 3.56
2717 5252 9.820229 TTTTCTGCAATAATCTAAGTTTACGTG 57.180 29.630 0.00 0.00 0.00 4.49
2718 5253 8.766000 TTCTGCAATAATCTAAGTTTACGTGA 57.234 30.769 0.00 0.00 0.00 4.35
2719 5254 8.407457 TCTGCAATAATCTAAGTTTACGTGAG 57.593 34.615 0.00 0.00 0.00 3.51
2734 5269 4.602340 ACGTGAGTGTGACCTTCTATTT 57.398 40.909 0.00 0.00 46.97 1.40
2735 5270 4.307432 ACGTGAGTGTGACCTTCTATTTG 58.693 43.478 0.00 0.00 46.97 2.32
2736 5271 3.123621 CGTGAGTGTGACCTTCTATTTGC 59.876 47.826 0.00 0.00 0.00 3.68
2737 5272 4.319177 GTGAGTGTGACCTTCTATTTGCT 58.681 43.478 0.00 0.00 0.00 3.91
2738 5273 5.479306 GTGAGTGTGACCTTCTATTTGCTA 58.521 41.667 0.00 0.00 0.00 3.49
2739 5274 6.109359 GTGAGTGTGACCTTCTATTTGCTAT 58.891 40.000 0.00 0.00 0.00 2.97
2740 5275 6.256757 GTGAGTGTGACCTTCTATTTGCTATC 59.743 42.308 0.00 0.00 0.00 2.08
2741 5276 6.155221 TGAGTGTGACCTTCTATTTGCTATCT 59.845 38.462 0.00 0.00 0.00 1.98
2742 5277 6.344500 AGTGTGACCTTCTATTTGCTATCTG 58.656 40.000 0.00 0.00 0.00 2.90
2743 5278 6.155221 AGTGTGACCTTCTATTTGCTATCTGA 59.845 38.462 0.00 0.00 0.00 3.27
2744 5279 6.818644 GTGTGACCTTCTATTTGCTATCTGAA 59.181 38.462 0.00 0.00 0.00 3.02
2745 5280 7.010923 GTGTGACCTTCTATTTGCTATCTGAAG 59.989 40.741 0.00 0.00 0.00 3.02
2746 5281 6.018343 GTGACCTTCTATTTGCTATCTGAAGC 60.018 42.308 0.00 5.31 43.08 3.86
2758 5293 5.687828 GCTATCTGAAGCAATAAGATGTGC 58.312 41.667 6.87 0.00 42.30 4.57
2759 5294 5.237996 GCTATCTGAAGCAATAAGATGTGCA 59.762 40.000 0.00 0.00 43.42 4.57
2760 5295 6.238566 GCTATCTGAAGCAATAAGATGTGCAA 60.239 38.462 0.00 0.00 43.42 4.08
2761 5296 5.300969 TCTGAAGCAATAAGATGTGCAAC 57.699 39.130 0.00 0.00 43.42 4.17
2762 5297 4.156556 TCTGAAGCAATAAGATGTGCAACC 59.843 41.667 0.00 0.00 43.42 3.77
2763 5298 3.193267 TGAAGCAATAAGATGTGCAACCC 59.807 43.478 0.00 0.00 43.42 4.11
2764 5299 2.806434 AGCAATAAGATGTGCAACCCA 58.194 42.857 0.00 0.00 43.42 4.51
2765 5300 3.368248 AGCAATAAGATGTGCAACCCAT 58.632 40.909 0.00 0.00 43.42 4.00
2766 5301 3.770933 AGCAATAAGATGTGCAACCCATT 59.229 39.130 0.00 0.00 43.42 3.16
2767 5302 4.955450 AGCAATAAGATGTGCAACCCATTA 59.045 37.500 0.00 0.00 43.42 1.90
2768 5303 5.068198 AGCAATAAGATGTGCAACCCATTAG 59.932 40.000 0.00 0.00 43.42 1.73
2769 5304 5.067674 GCAATAAGATGTGCAACCCATTAGA 59.932 40.000 0.00 0.00 40.58 2.10
2770 5305 6.405731 GCAATAAGATGTGCAACCCATTAGAA 60.406 38.462 0.00 0.00 40.58 2.10
2771 5306 7.546358 CAATAAGATGTGCAACCCATTAGAAA 58.454 34.615 0.00 0.00 34.36 2.52
2772 5307 5.649782 AAGATGTGCAACCCATTAGAAAG 57.350 39.130 0.00 0.00 34.36 2.62
2773 5308 4.019174 AGATGTGCAACCCATTAGAAAGG 58.981 43.478 0.00 0.00 34.36 3.11
2781 5316 2.110578 CCCATTAGAAAGGGGCTTTGG 58.889 52.381 0.00 0.00 41.58 3.28
2782 5317 2.110578 CCATTAGAAAGGGGCTTTGGG 58.889 52.381 0.00 0.00 33.49 4.12
2783 5318 2.110578 CATTAGAAAGGGGCTTTGGGG 58.889 52.381 0.00 0.00 33.49 4.96
2784 5319 0.252057 TTAGAAAGGGGCTTTGGGGC 60.252 55.000 0.00 0.00 33.49 5.80
2785 5320 1.439524 TAGAAAGGGGCTTTGGGGCA 61.440 55.000 0.00 0.00 42.84 5.36
2786 5321 1.613332 GAAAGGGGCTTTGGGGCAT 60.613 57.895 0.00 0.00 42.84 4.40
2787 5322 1.902765 GAAAGGGGCTTTGGGGCATG 61.903 60.000 0.00 0.00 42.84 4.06
2788 5323 2.694580 AAAGGGGCTTTGGGGCATGT 62.695 55.000 0.00 0.00 42.84 3.21
2789 5324 3.076916 GGGGCTTTGGGGCATGTC 61.077 66.667 0.00 0.00 42.84 3.06
2790 5325 2.037847 GGGCTTTGGGGCATGTCT 59.962 61.111 0.00 0.00 42.84 3.41
2791 5326 2.353610 GGGCTTTGGGGCATGTCTG 61.354 63.158 0.00 0.00 42.84 3.51
2792 5327 1.304381 GGCTTTGGGGCATGTCTGA 60.304 57.895 0.00 0.00 40.53 3.27
2793 5328 0.899717 GGCTTTGGGGCATGTCTGAA 60.900 55.000 0.00 0.00 40.53 3.02
2794 5329 1.188863 GCTTTGGGGCATGTCTGAAT 58.811 50.000 0.00 0.00 0.00 2.57
2795 5330 1.135721 GCTTTGGGGCATGTCTGAATC 59.864 52.381 0.00 0.00 0.00 2.52
2796 5331 1.753073 CTTTGGGGCATGTCTGAATCC 59.247 52.381 0.00 0.00 0.00 3.01
2797 5332 1.002069 TTGGGGCATGTCTGAATCCT 58.998 50.000 0.00 0.00 0.00 3.24
2798 5333 1.891933 TGGGGCATGTCTGAATCCTA 58.108 50.000 0.00 0.00 0.00 2.94
2799 5334 1.770658 TGGGGCATGTCTGAATCCTAG 59.229 52.381 0.00 0.00 0.00 3.02
2800 5335 1.072965 GGGGCATGTCTGAATCCTAGG 59.927 57.143 0.82 0.82 0.00 3.02
2801 5336 2.050144 GGGCATGTCTGAATCCTAGGA 58.950 52.381 15.46 15.46 0.00 2.94
2802 5337 2.439507 GGGCATGTCTGAATCCTAGGAA 59.560 50.000 17.30 0.00 0.00 3.36
2803 5338 3.117888 GGGCATGTCTGAATCCTAGGAAA 60.118 47.826 17.30 3.71 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 7.117236 GGAATGTTGTAACAATCTTCGTCTGTA 59.883 37.037 11.36 0.00 43.03 2.74
122 123 5.180492 TGGGAATGTTGTAACAATCTTCGTC 59.820 40.000 11.36 4.66 43.03 4.20
165 166 1.555075 GTCTTGTGGGTAGCCAGATCA 59.445 52.381 15.48 6.25 0.00 2.92
245 254 3.869246 ACGTGGCATTTAAGGAAGATACG 59.131 43.478 0.00 0.00 0.00 3.06
463 477 1.880027 GCGGAGAACAACCATGAAACT 59.120 47.619 0.00 0.00 0.00 2.66
502 516 3.181437 TGCTATACATGACGGAGGGAGTA 60.181 47.826 0.00 0.00 0.00 2.59
503 517 2.240279 GCTATACATGACGGAGGGAGT 58.760 52.381 0.00 0.00 0.00 3.85
505 519 2.375014 TGCTATACATGACGGAGGGA 57.625 50.000 0.00 0.00 0.00 4.20
506 520 3.685139 AATGCTATACATGACGGAGGG 57.315 47.619 0.00 0.00 39.60 4.30
507 521 9.631452 CATATATAATGCTATACATGACGGAGG 57.369 37.037 0.00 0.00 39.60 4.30
574 2777 9.499369 AGACGGAGGGAGTACTATATTACTATA 57.501 37.037 0.00 0.00 32.17 1.31
577 2780 6.271857 TGAGACGGAGGGAGTACTATATTACT 59.728 42.308 2.59 2.59 34.86 2.24
584 2787 5.579753 ATTATGAGACGGAGGGAGTACTA 57.420 43.478 0.00 0.00 0.00 1.82
586 2789 5.944599 TGATATTATGAGACGGAGGGAGTAC 59.055 44.000 0.00 0.00 0.00 2.73
589 2792 5.257262 TCTGATATTATGAGACGGAGGGAG 58.743 45.833 0.00 0.00 0.00 4.30
591 2794 4.142271 GCTCTGATATTATGAGACGGAGGG 60.142 50.000 0.00 0.00 35.37 4.30
592 2795 4.460731 TGCTCTGATATTATGAGACGGAGG 59.539 45.833 0.00 0.00 35.37 4.30
593 2796 5.635417 TGCTCTGATATTATGAGACGGAG 57.365 43.478 0.00 0.00 37.14 4.63
595 2798 7.664082 AAAATGCTCTGATATTATGAGACGG 57.336 36.000 0.00 0.00 0.00 4.79
609 2812 7.453393 TGGAGGGAGTAATATAAAATGCTCTG 58.547 38.462 0.00 0.00 0.00 3.35
610 2813 7.633018 TGGAGGGAGTAATATAAAATGCTCT 57.367 36.000 0.00 0.00 0.00 4.09
611 2814 8.103305 TCATGGAGGGAGTAATATAAAATGCTC 58.897 37.037 0.00 0.00 0.00 4.26
613 2816 8.635765 TTCATGGAGGGAGTAATATAAAATGC 57.364 34.615 0.00 0.00 0.00 3.56
625 2828 7.503902 GCTTTTATATTTCTTCATGGAGGGAGT 59.496 37.037 0.00 0.00 0.00 3.85
626 2829 7.308229 CGCTTTTATATTTCTTCATGGAGGGAG 60.308 40.741 0.00 0.00 0.00 4.30
627 2830 6.486657 CGCTTTTATATTTCTTCATGGAGGGA 59.513 38.462 0.00 0.00 0.00 4.20
629 2832 7.264373 ACGCTTTTATATTTCTTCATGGAGG 57.736 36.000 0.00 0.00 0.00 4.30
647 2850 5.969435 CCGAAAAGAGTTTTCTAAACGCTTT 59.031 36.000 20.65 20.65 46.84 3.51
648 2851 5.295045 TCCGAAAAGAGTTTTCTAAACGCTT 59.705 36.000 13.20 13.20 45.23 4.68
649 2852 4.812626 TCCGAAAAGAGTTTTCTAAACGCT 59.187 37.500 9.75 3.23 45.23 5.07
650 2853 5.086888 TCCGAAAAGAGTTTTCTAAACGC 57.913 39.130 9.75 0.00 45.23 4.84
651 2854 5.333875 CCCTCCGAAAAGAGTTTTCTAAACG 60.334 44.000 9.75 0.00 45.23 3.60
652 2855 5.761726 TCCCTCCGAAAAGAGTTTTCTAAAC 59.238 40.000 9.75 0.00 45.23 2.01
653 2856 5.932455 TCCCTCCGAAAAGAGTTTTCTAAA 58.068 37.500 9.75 0.00 45.23 1.85
655 2858 4.591924 ACTCCCTCCGAAAAGAGTTTTCTA 59.408 41.667 9.75 0.00 45.23 2.10
667 2957 4.726035 AGTGATAGATACTCCCTCCGAA 57.274 45.455 0.00 0.00 0.00 4.30
668 2958 4.726035 AAGTGATAGATACTCCCTCCGA 57.274 45.455 0.00 0.00 0.00 4.55
670 2960 6.987403 AGAAAAGTGATAGATACTCCCTCC 57.013 41.667 0.00 0.00 0.00 4.30
1141 3432 4.521062 GGCCTCGATGTCGCTGCT 62.521 66.667 0.00 0.00 39.60 4.24
1540 3844 3.703127 GAGAAGGCCCCCGACGTT 61.703 66.667 0.00 0.00 0.00 3.99
1713 4046 9.916360 TCTGGTAGTACATATTTTGAGTAGAGA 57.084 33.333 2.06 0.00 0.00 3.10
1727 4060 9.314321 CGATCAAAGTTAATTCTGGTAGTACAT 57.686 33.333 2.06 0.00 0.00 2.29
1728 4061 7.277098 GCGATCAAAGTTAATTCTGGTAGTACA 59.723 37.037 2.06 0.00 0.00 2.90
1729 4062 7.254353 GGCGATCAAAGTTAATTCTGGTAGTAC 60.254 40.741 0.00 0.00 0.00 2.73
1730 4063 6.759827 GGCGATCAAAGTTAATTCTGGTAGTA 59.240 38.462 0.00 0.00 0.00 1.82
1731 4064 5.585047 GGCGATCAAAGTTAATTCTGGTAGT 59.415 40.000 0.00 0.00 0.00 2.73
1732 4065 5.584649 TGGCGATCAAAGTTAATTCTGGTAG 59.415 40.000 0.00 0.00 0.00 3.18
1734 4067 4.331968 TGGCGATCAAAGTTAATTCTGGT 58.668 39.130 0.00 0.00 0.00 4.00
1736 4069 5.230726 GCATTGGCGATCAAAGTTAATTCTG 59.769 40.000 0.00 0.00 39.05 3.02
1737 4070 5.105797 TGCATTGGCGATCAAAGTTAATTCT 60.106 36.000 0.00 0.00 45.35 2.40
1738 4071 5.101628 TGCATTGGCGATCAAAGTTAATTC 58.898 37.500 0.00 0.00 45.35 2.17
1747 4164 5.335113 GCTCTAAATATGCATTGGCGATCAA 60.335 40.000 3.54 0.00 45.35 2.57
1768 4185 2.744741 GAGGAAGTACTTTTGGCAGCTC 59.255 50.000 10.02 0.00 0.00 4.09
1777 4194 5.584551 AGGTCAAATGGAGGAAGTACTTT 57.415 39.130 10.02 0.00 0.00 2.66
1778 4195 6.893020 ATAGGTCAAATGGAGGAAGTACTT 57.107 37.500 8.13 8.13 0.00 2.24
1860 4288 9.262358 GTTATGGATTTGGTAGTCTAGACAATC 57.738 37.037 24.44 20.71 0.00 2.67
1862 4290 8.141298 TGTTATGGATTTGGTAGTCTAGACAA 57.859 34.615 24.44 10.09 0.00 3.18
1918 4346 9.832445 CCACACCTACAATACTGAATATAAACT 57.168 33.333 0.00 0.00 0.00 2.66
1928 4356 8.964476 AGAAATTATCCACACCTACAATACTG 57.036 34.615 0.00 0.00 0.00 2.74
1929 4357 8.993424 AGAGAAATTATCCACACCTACAATACT 58.007 33.333 0.00 0.00 0.00 2.12
1941 4369 8.336801 ACCAAGTGTTTAGAGAAATTATCCAC 57.663 34.615 0.00 0.00 0.00 4.02
1979 4407 9.927668 CATTGGTGTTCTTATAAAATTCAACCT 57.072 29.630 0.00 0.00 0.00 3.50
1990 4433 8.046708 AGAACTATGCACATTGGTGTTCTTATA 58.953 33.333 0.00 0.00 46.95 0.98
2003 4446 3.318275 ACGATACGGAGAACTATGCACAT 59.682 43.478 0.00 0.00 0.00 3.21
2009 4452 5.609423 AGAGTGTACGATACGGAGAACTAT 58.391 41.667 0.00 0.00 0.00 2.12
2021 4464 7.058023 AGAGAGTATGTAGAGAGTGTACGAT 57.942 40.000 0.00 0.00 0.00 3.73
2023 4466 7.543172 GGATAGAGAGTATGTAGAGAGTGTACG 59.457 44.444 0.00 0.00 0.00 3.67
2074 4517 4.215109 ACCCTACATTGCTTGAGTTTTGT 58.785 39.130 0.00 0.00 0.00 2.83
2077 4520 4.892934 TCAAACCCTACATTGCTTGAGTTT 59.107 37.500 0.00 0.00 0.00 2.66
2080 4523 4.278170 TGTTCAAACCCTACATTGCTTGAG 59.722 41.667 0.00 0.00 0.00 3.02
2085 4528 4.584327 ACTTGTTCAAACCCTACATTGC 57.416 40.909 0.00 0.00 0.00 3.56
2188 4644 3.249080 CAGATTTGCAAACTTTGGCCAAG 59.751 43.478 19.48 15.02 38.64 3.61
2189 4645 3.204526 CAGATTTGCAAACTTTGGCCAA 58.795 40.909 16.05 16.05 0.00 4.52
2190 4646 2.170187 ACAGATTTGCAAACTTTGGCCA 59.830 40.909 15.41 0.00 0.00 5.36
2191 4647 2.837498 ACAGATTTGCAAACTTTGGCC 58.163 42.857 15.41 0.00 0.00 5.36
2192 4648 4.620982 AGTACAGATTTGCAAACTTTGGC 58.379 39.130 15.41 10.10 0.00 4.52
2193 4649 7.538303 AAAAGTACAGATTTGCAAACTTTGG 57.462 32.000 19.91 9.89 36.25 3.28
2194 4650 9.515020 TCTAAAAGTACAGATTTGCAAACTTTG 57.485 29.630 19.91 17.14 36.25 2.77
2225 4689 7.875554 TCTGTTTTAAGATGCAGTGTGTACATA 59.124 33.333 0.00 0.00 0.00 2.29
2228 4692 6.423905 TCTCTGTTTTAAGATGCAGTGTGTAC 59.576 38.462 0.00 0.00 0.00 2.90
2229 4693 6.521162 TCTCTGTTTTAAGATGCAGTGTGTA 58.479 36.000 0.00 0.00 0.00 2.90
2231 4695 5.929697 TCTCTGTTTTAAGATGCAGTGTG 57.070 39.130 0.00 0.00 0.00 3.82
2233 4697 6.963796 ACTTTCTCTGTTTTAAGATGCAGTG 58.036 36.000 0.00 0.00 0.00 3.66
2234 4698 8.725148 CATACTTTCTCTGTTTTAAGATGCAGT 58.275 33.333 0.00 0.00 0.00 4.40
2235 4699 8.725148 ACATACTTTCTCTGTTTTAAGATGCAG 58.275 33.333 0.00 0.00 0.00 4.41
2237 4701 9.974750 GTACATACTTTCTCTGTTTTAAGATGC 57.025 33.333 0.00 0.00 0.00 3.91
2240 4704 9.924650 GGAGTACATACTTTCTCTGTTTTAAGA 57.075 33.333 0.00 0.00 36.50 2.10
2241 4705 9.152595 GGGAGTACATACTTTCTCTGTTTTAAG 57.847 37.037 0.00 0.00 36.50 1.85
2242 4706 8.098912 GGGGAGTACATACTTTCTCTGTTTTAA 58.901 37.037 0.00 0.00 36.50 1.52
2263 4758 5.179452 ACAAATAATATGGATCGGGGGAG 57.821 43.478 0.00 0.00 0.00 4.30
2264 4759 4.323180 CGACAAATAATATGGATCGGGGGA 60.323 45.833 0.00 0.00 0.00 4.81
2265 4760 3.938963 CGACAAATAATATGGATCGGGGG 59.061 47.826 0.00 0.00 0.00 5.40
2266 4761 3.374058 GCGACAAATAATATGGATCGGGG 59.626 47.826 0.00 0.00 0.00 5.73
2267 4762 4.253685 AGCGACAAATAATATGGATCGGG 58.746 43.478 0.00 0.00 0.00 5.14
2268 4763 4.929211 TGAGCGACAAATAATATGGATCGG 59.071 41.667 0.00 0.00 0.00 4.18
2269 4764 6.466308 TTGAGCGACAAATAATATGGATCG 57.534 37.500 0.00 0.00 35.39 3.69
2279 4774 8.194769 TAGATACATCTGTTTGAGCGACAAATA 58.805 33.333 13.29 10.56 42.42 1.40
2280 4775 7.041721 TAGATACATCTGTTTGAGCGACAAAT 58.958 34.615 13.29 2.30 42.42 2.32
2281 4776 5.237815 AGATACATCTGTTTGAGCGACAAA 58.762 37.500 7.75 7.75 39.64 2.83
2282 4777 4.820897 AGATACATCTGTTTGAGCGACAA 58.179 39.130 0.00 0.00 35.42 3.18
2283 4778 4.456280 AGATACATCTGTTTGAGCGACA 57.544 40.909 0.00 0.00 35.42 4.35
2284 4779 5.683743 GTCTAGATACATCTGTTTGAGCGAC 59.316 44.000 0.00 0.00 37.76 5.19
2285 4780 5.504173 CGTCTAGATACATCTGTTTGAGCGA 60.504 44.000 0.00 0.00 37.76 4.93
2286 4781 4.672862 CGTCTAGATACATCTGTTTGAGCG 59.327 45.833 0.00 0.00 37.76 5.03
2287 4782 5.583495 ACGTCTAGATACATCTGTTTGAGC 58.417 41.667 0.00 0.00 37.76 4.26
2288 4783 8.467402 AAAACGTCTAGATACATCTGTTTGAG 57.533 34.615 0.00 0.00 37.76 3.02
2289 4784 8.827177 AAAAACGTCTAGATACATCTGTTTGA 57.173 30.769 0.00 0.00 37.76 2.69
2290 4785 8.708742 TGAAAAACGTCTAGATACATCTGTTTG 58.291 33.333 0.00 0.00 37.76 2.93
2291 4786 8.827177 TGAAAAACGTCTAGATACATCTGTTT 57.173 30.769 0.00 1.69 37.76 2.83
2292 4787 8.088981 ACTGAAAAACGTCTAGATACATCTGTT 58.911 33.333 0.00 0.00 37.76 3.16
2293 4788 7.542477 CACTGAAAAACGTCTAGATACATCTGT 59.458 37.037 0.00 0.00 37.76 3.41
2294 4789 7.463383 GCACTGAAAAACGTCTAGATACATCTG 60.463 40.741 0.00 0.00 37.76 2.90
2295 4790 6.531948 GCACTGAAAAACGTCTAGATACATCT 59.468 38.462 0.00 0.00 40.86 2.90
2296 4791 6.531948 AGCACTGAAAAACGTCTAGATACATC 59.468 38.462 0.00 0.00 0.00 3.06
2297 4792 6.398918 AGCACTGAAAAACGTCTAGATACAT 58.601 36.000 0.00 0.00 0.00 2.29
2298 4793 5.779922 AGCACTGAAAAACGTCTAGATACA 58.220 37.500 0.00 0.00 0.00 2.29
2299 4794 7.249147 TCTAGCACTGAAAAACGTCTAGATAC 58.751 38.462 0.00 0.00 29.74 2.24
2300 4795 7.387119 TCTAGCACTGAAAAACGTCTAGATA 57.613 36.000 0.00 0.00 29.74 1.98
2301 4796 6.268825 TCTAGCACTGAAAAACGTCTAGAT 57.731 37.500 0.00 0.00 29.74 1.98
2302 4797 5.700722 TCTAGCACTGAAAAACGTCTAGA 57.299 39.130 0.00 0.00 31.56 2.43
2303 4798 9.900710 ATATATCTAGCACTGAAAAACGTCTAG 57.099 33.333 0.00 0.00 0.00 2.43
2304 4799 9.894783 GATATATCTAGCACTGAAAAACGTCTA 57.105 33.333 5.42 0.00 0.00 2.59
2305 4800 7.868415 GGATATATCTAGCACTGAAAAACGTCT 59.132 37.037 12.42 0.00 0.00 4.18
2306 4801 7.652105 TGGATATATCTAGCACTGAAAAACGTC 59.348 37.037 12.42 0.00 0.00 4.34
2307 4802 7.497595 TGGATATATCTAGCACTGAAAAACGT 58.502 34.615 12.42 0.00 0.00 3.99
2308 4803 7.946655 TGGATATATCTAGCACTGAAAAACG 57.053 36.000 12.42 0.00 0.00 3.60
2312 4807 9.716531 CTCAAATGGATATATCTAGCACTGAAA 57.283 33.333 12.42 0.00 0.00 2.69
2313 4808 9.093458 TCTCAAATGGATATATCTAGCACTGAA 57.907 33.333 12.42 0.00 0.00 3.02
2314 4809 8.655935 TCTCAAATGGATATATCTAGCACTGA 57.344 34.615 12.42 7.17 0.00 3.41
2315 4810 8.747471 TCTCTCAAATGGATATATCTAGCACTG 58.253 37.037 12.42 3.63 0.00 3.66
2316 4811 8.748412 GTCTCTCAAATGGATATATCTAGCACT 58.252 37.037 12.42 0.00 0.00 4.40
2317 4812 8.526978 TGTCTCTCAAATGGATATATCTAGCAC 58.473 37.037 12.42 0.00 0.00 4.40
2318 4813 8.655935 TGTCTCTCAAATGGATATATCTAGCA 57.344 34.615 12.42 2.95 0.00 3.49
2319 4814 9.585099 CTTGTCTCTCAAATGGATATATCTAGC 57.415 37.037 12.42 0.00 35.48 3.42
2328 4823 8.717717 TCCATATTACTTGTCTCTCAAATGGAT 58.282 33.333 0.00 0.00 40.51 3.41
2329 4824 8.089625 TCCATATTACTTGTCTCTCAAATGGA 57.910 34.615 0.00 0.00 41.85 3.41
2330 4825 8.915057 ATCCATATTACTTGTCTCTCAAATGG 57.085 34.615 0.00 0.00 39.17 3.16
2332 4827 9.347240 CCAATCCATATTACTTGTCTCTCAAAT 57.653 33.333 0.00 0.00 35.48 2.32
2333 4828 8.548025 TCCAATCCATATTACTTGTCTCTCAAA 58.452 33.333 0.00 0.00 35.48 2.69
2334 4829 8.089625 TCCAATCCATATTACTTGTCTCTCAA 57.910 34.615 0.00 0.00 34.61 3.02
2335 4830 7.202038 CCTCCAATCCATATTACTTGTCTCTCA 60.202 40.741 0.00 0.00 0.00 3.27
2336 4831 7.158021 CCTCCAATCCATATTACTTGTCTCTC 58.842 42.308 0.00 0.00 0.00 3.20
2337 4832 6.043706 CCCTCCAATCCATATTACTTGTCTCT 59.956 42.308 0.00 0.00 0.00 3.10
2338 4833 6.043243 TCCCTCCAATCCATATTACTTGTCTC 59.957 42.308 0.00 0.00 0.00 3.36
2339 4834 5.911178 TCCCTCCAATCCATATTACTTGTCT 59.089 40.000 0.00 0.00 0.00 3.41
2340 4835 6.183361 ACTCCCTCCAATCCATATTACTTGTC 60.183 42.308 0.00 0.00 0.00 3.18
2341 4836 5.672194 ACTCCCTCCAATCCATATTACTTGT 59.328 40.000 0.00 0.00 0.00 3.16
2342 4837 6.192970 ACTCCCTCCAATCCATATTACTTG 57.807 41.667 0.00 0.00 0.00 3.16
2343 4838 7.947782 TTACTCCCTCCAATCCATATTACTT 57.052 36.000 0.00 0.00 0.00 2.24
2344 4839 9.629649 TTATTACTCCCTCCAATCCATATTACT 57.370 33.333 0.00 0.00 0.00 2.24
2350 4845 9.759473 CATAAATTATTACTCCCTCCAATCCAT 57.241 33.333 0.00 0.00 0.00 3.41
2351 4846 8.954729 TCATAAATTATTACTCCCTCCAATCCA 58.045 33.333 0.00 0.00 0.00 3.41
2352 4847 9.981460 ATCATAAATTATTACTCCCTCCAATCC 57.019 33.333 0.00 0.00 0.00 3.01
2386 4881 7.668052 ACAAATTGCCACTGTACTCCTAAAATA 59.332 33.333 0.00 0.00 0.00 1.40
2398 4893 5.528043 TGTTCATTACAAATTGCCACTGT 57.472 34.783 0.00 0.00 32.64 3.55
2429 4964 9.639601 GACATATGATTGATGCATTGATGATTT 57.360 29.630 10.38 0.00 0.00 2.17
2440 4975 5.678483 GTCAAACACGACATATGATTGATGC 59.322 40.000 10.38 2.68 39.90 3.91
2449 4984 8.836268 TTAAAGTTAGGTCAAACACGACATAT 57.164 30.769 0.00 0.00 37.66 1.78
2496 5031 9.726438 GAGGTGTTGTTTGGCTCTATATATAAT 57.274 33.333 0.00 0.00 0.00 1.28
2497 5032 8.710239 TGAGGTGTTGTTTGGCTCTATATATAA 58.290 33.333 0.00 0.00 0.00 0.98
2502 5037 4.286032 ACTGAGGTGTTGTTTGGCTCTATA 59.714 41.667 0.00 0.00 0.00 1.31
2527 5062 9.048446 GGAGTGAGTAGTACATGTAAACAAAAA 57.952 33.333 7.25 0.00 0.00 1.94
2528 5063 8.205512 TGGAGTGAGTAGTACATGTAAACAAAA 58.794 33.333 7.25 0.00 0.00 2.44
2529 5064 7.728148 TGGAGTGAGTAGTACATGTAAACAAA 58.272 34.615 7.25 0.00 0.00 2.83
2530 5065 7.292713 TGGAGTGAGTAGTACATGTAAACAA 57.707 36.000 7.25 0.00 0.00 2.83
2531 5066 6.904463 TGGAGTGAGTAGTACATGTAAACA 57.096 37.500 7.25 1.38 0.00 2.83
2532 5067 7.491696 GGAATGGAGTGAGTAGTACATGTAAAC 59.508 40.741 7.25 9.14 30.99 2.01
2533 5068 7.179516 TGGAATGGAGTGAGTAGTACATGTAAA 59.820 37.037 7.25 0.00 30.99 2.01
2534 5069 6.666113 TGGAATGGAGTGAGTAGTACATGTAA 59.334 38.462 7.25 0.00 30.99 2.41
2535 5070 6.192044 TGGAATGGAGTGAGTAGTACATGTA 58.808 40.000 0.08 0.08 30.99 2.29
2536 5071 5.023452 TGGAATGGAGTGAGTAGTACATGT 58.977 41.667 2.69 2.69 30.99 3.21
2537 5072 5.598416 TGGAATGGAGTGAGTAGTACATG 57.402 43.478 2.52 0.00 30.99 3.21
2538 5073 8.497910 AATATGGAATGGAGTGAGTAGTACAT 57.502 34.615 2.52 0.00 31.89 2.29
2539 5074 7.914427 AATATGGAATGGAGTGAGTAGTACA 57.086 36.000 2.52 0.00 0.00 2.90
2542 5077 9.213777 TCTTTAATATGGAATGGAGTGAGTAGT 57.786 33.333 0.00 0.00 0.00 2.73
2543 5078 9.703892 CTCTTTAATATGGAATGGAGTGAGTAG 57.296 37.037 0.00 0.00 0.00 2.57
2544 5079 8.150945 GCTCTTTAATATGGAATGGAGTGAGTA 58.849 37.037 0.00 0.00 0.00 2.59
2545 5080 6.995091 GCTCTTTAATATGGAATGGAGTGAGT 59.005 38.462 0.00 0.00 0.00 3.41
2546 5081 6.994496 TGCTCTTTAATATGGAATGGAGTGAG 59.006 38.462 0.00 0.00 0.00 3.51
2547 5082 6.767902 GTGCTCTTTAATATGGAATGGAGTGA 59.232 38.462 0.00 0.00 0.00 3.41
2548 5083 6.769822 AGTGCTCTTTAATATGGAATGGAGTG 59.230 38.462 0.00 0.00 0.00 3.51
2549 5084 6.904626 AGTGCTCTTTAATATGGAATGGAGT 58.095 36.000 0.00 0.00 0.00 3.85
2550 5085 8.153550 ACTAGTGCTCTTTAATATGGAATGGAG 58.846 37.037 0.00 0.00 0.00 3.86
2551 5086 7.933577 CACTAGTGCTCTTTAATATGGAATGGA 59.066 37.037 10.54 0.00 0.00 3.41
2552 5087 7.173907 CCACTAGTGCTCTTTAATATGGAATGG 59.826 40.741 17.86 0.00 0.00 3.16
2553 5088 7.308229 GCCACTAGTGCTCTTTAATATGGAATG 60.308 40.741 17.86 0.00 0.00 2.67
2554 5089 6.712547 GCCACTAGTGCTCTTTAATATGGAAT 59.287 38.462 17.86 0.00 0.00 3.01
2555 5090 6.055588 GCCACTAGTGCTCTTTAATATGGAA 58.944 40.000 17.86 0.00 0.00 3.53
2556 5091 5.366768 AGCCACTAGTGCTCTTTAATATGGA 59.633 40.000 17.86 0.00 32.41 3.41
2557 5092 5.468072 CAGCCACTAGTGCTCTTTAATATGG 59.532 44.000 17.86 0.00 36.81 2.74
2558 5093 5.468072 CCAGCCACTAGTGCTCTTTAATATG 59.532 44.000 17.86 0.32 36.81 1.78
2559 5094 5.455326 CCCAGCCACTAGTGCTCTTTAATAT 60.455 44.000 17.86 0.00 36.81 1.28
2560 5095 4.141711 CCCAGCCACTAGTGCTCTTTAATA 60.142 45.833 17.86 0.00 36.81 0.98
2561 5096 3.370953 CCCAGCCACTAGTGCTCTTTAAT 60.371 47.826 17.86 0.00 36.81 1.40
2562 5097 2.027192 CCCAGCCACTAGTGCTCTTTAA 60.027 50.000 17.86 0.00 36.81 1.52
2563 5098 1.555075 CCCAGCCACTAGTGCTCTTTA 59.445 52.381 17.86 0.00 36.81 1.85
2564 5099 0.326264 CCCAGCCACTAGTGCTCTTT 59.674 55.000 17.86 0.00 36.81 2.52
2565 5100 1.557269 CCCCAGCCACTAGTGCTCTT 61.557 60.000 17.86 0.00 36.81 2.85
2566 5101 1.992277 CCCCAGCCACTAGTGCTCT 60.992 63.158 17.86 12.97 36.81 4.09
2567 5102 2.294078 ACCCCAGCCACTAGTGCTC 61.294 63.158 17.86 10.89 36.81 4.26
2568 5103 2.203998 ACCCCAGCCACTAGTGCT 60.204 61.111 17.86 14.67 40.41 4.40
2569 5104 2.045926 CACCCCAGCCACTAGTGC 60.046 66.667 17.86 12.64 0.00 4.40
2570 5105 2.045926 GCACCCCAGCCACTAGTG 60.046 66.667 16.34 16.34 0.00 2.74
2571 5106 3.706373 CGCACCCCAGCCACTAGT 61.706 66.667 0.00 0.00 0.00 2.57
2591 5126 4.148825 CTCAAGAGGTCCGCCCGG 62.149 72.222 0.00 0.00 38.74 5.73
2592 5127 4.148825 CCTCAAGAGGTCCGCCCG 62.149 72.222 7.98 0.00 43.61 6.13
2601 5136 1.662629 CGCACAATACTGCCTCAAGAG 59.337 52.381 0.00 0.00 33.18 2.85
2602 5137 1.725641 CGCACAATACTGCCTCAAGA 58.274 50.000 0.00 0.00 33.18 3.02
2603 5138 0.097674 GCGCACAATACTGCCTCAAG 59.902 55.000 0.30 0.00 33.18 3.02
2604 5139 0.605050 TGCGCACAATACTGCCTCAA 60.605 50.000 5.66 0.00 33.18 3.02
2605 5140 1.003959 TGCGCACAATACTGCCTCA 60.004 52.632 5.66 0.00 33.18 3.86
2606 5141 1.021390 AGTGCGCACAATACTGCCTC 61.021 55.000 39.21 10.74 33.18 4.70
2607 5142 0.249120 TAGTGCGCACAATACTGCCT 59.751 50.000 39.21 19.56 33.18 4.75
2608 5143 1.083489 TTAGTGCGCACAATACTGCC 58.917 50.000 39.21 12.10 33.18 4.85
2609 5144 2.351418 TGATTAGTGCGCACAATACTGC 59.649 45.455 39.21 22.45 0.00 4.40
2610 5145 4.093408 ACTTGATTAGTGCGCACAATACTG 59.907 41.667 39.21 25.55 35.19 2.74
2611 5146 4.253685 ACTTGATTAGTGCGCACAATACT 58.746 39.130 39.21 22.49 35.19 2.12
2612 5147 4.600012 ACTTGATTAGTGCGCACAATAC 57.400 40.909 39.21 26.50 35.19 1.89
2613 5148 4.454161 ACAACTTGATTAGTGCGCACAATA 59.546 37.500 39.21 24.61 37.12 1.90
2614 5149 3.253188 ACAACTTGATTAGTGCGCACAAT 59.747 39.130 39.21 32.16 37.12 2.71
2615 5150 2.616376 ACAACTTGATTAGTGCGCACAA 59.384 40.909 39.21 29.48 37.12 3.33
2616 5151 2.217750 ACAACTTGATTAGTGCGCACA 58.782 42.857 39.21 22.69 37.12 4.57
2617 5152 2.721797 CGACAACTTGATTAGTGCGCAC 60.722 50.000 32.79 32.79 37.12 5.34
2618 5153 1.459209 CGACAACTTGATTAGTGCGCA 59.541 47.619 5.66 5.66 37.12 6.09
2619 5154 1.459592 ACGACAACTTGATTAGTGCGC 59.540 47.619 0.00 0.00 37.12 6.09
2620 5155 3.918591 ACTACGACAACTTGATTAGTGCG 59.081 43.478 0.00 0.00 37.12 5.34
2621 5156 5.176958 ACAACTACGACAACTTGATTAGTGC 59.823 40.000 0.00 0.00 37.12 4.40
2622 5157 6.764877 ACAACTACGACAACTTGATTAGTG 57.235 37.500 0.00 0.00 37.12 2.74
2623 5158 8.876275 TTAACAACTACGACAACTTGATTAGT 57.124 30.769 0.00 0.00 39.32 2.24
2624 5159 9.741168 CATTAACAACTACGACAACTTGATTAG 57.259 33.333 0.00 0.00 0.00 1.73
2625 5160 9.263538 ACATTAACAACTACGACAACTTGATTA 57.736 29.630 0.00 0.00 0.00 1.75
2626 5161 8.067784 CACATTAACAACTACGACAACTTGATT 58.932 33.333 0.00 0.00 0.00 2.57
2627 5162 7.225931 ACACATTAACAACTACGACAACTTGAT 59.774 33.333 0.00 0.00 0.00 2.57
2628 5163 6.535865 ACACATTAACAACTACGACAACTTGA 59.464 34.615 0.00 0.00 0.00 3.02
2629 5164 6.711579 ACACATTAACAACTACGACAACTTG 58.288 36.000 0.00 0.00 0.00 3.16
2630 5165 6.913873 ACACATTAACAACTACGACAACTT 57.086 33.333 0.00 0.00 0.00 2.66
2631 5166 6.535865 TCAACACATTAACAACTACGACAACT 59.464 34.615 0.00 0.00 0.00 3.16
2632 5167 6.626095 GTCAACACATTAACAACTACGACAAC 59.374 38.462 0.00 0.00 0.00 3.32
2633 5168 6.313164 TGTCAACACATTAACAACTACGACAA 59.687 34.615 0.00 0.00 0.00 3.18
2634 5169 5.811100 TGTCAACACATTAACAACTACGACA 59.189 36.000 0.00 0.00 0.00 4.35
2635 5170 6.019318 ACTGTCAACACATTAACAACTACGAC 60.019 38.462 0.00 0.00 0.00 4.34
2636 5171 6.019398 CACTGTCAACACATTAACAACTACGA 60.019 38.462 0.00 0.00 0.00 3.43
2637 5172 6.126741 CACTGTCAACACATTAACAACTACG 58.873 40.000 0.00 0.00 0.00 3.51
2638 5173 5.907391 GCACTGTCAACACATTAACAACTAC 59.093 40.000 0.00 0.00 0.00 2.73
2639 5174 5.586643 TGCACTGTCAACACATTAACAACTA 59.413 36.000 0.00 0.00 0.00 2.24
2640 5175 4.397730 TGCACTGTCAACACATTAACAACT 59.602 37.500 0.00 0.00 0.00 3.16
2641 5176 4.667262 TGCACTGTCAACACATTAACAAC 58.333 39.130 0.00 0.00 0.00 3.32
2642 5177 4.637977 TCTGCACTGTCAACACATTAACAA 59.362 37.500 0.00 0.00 0.00 2.83
2643 5178 4.195416 TCTGCACTGTCAACACATTAACA 58.805 39.130 0.00 0.00 0.00 2.41
2644 5179 4.811555 TCTGCACTGTCAACACATTAAC 57.188 40.909 0.00 0.00 0.00 2.01
2645 5180 5.530543 TCAATCTGCACTGTCAACACATTAA 59.469 36.000 0.00 0.00 0.00 1.40
2646 5181 5.049474 GTCAATCTGCACTGTCAACACATTA 60.049 40.000 0.00 0.00 0.00 1.90
2647 5182 3.884693 TCAATCTGCACTGTCAACACATT 59.115 39.130 0.00 0.00 0.00 2.71
2648 5183 3.251729 GTCAATCTGCACTGTCAACACAT 59.748 43.478 0.00 0.00 0.00 3.21
2649 5184 2.613595 GTCAATCTGCACTGTCAACACA 59.386 45.455 0.00 0.00 0.00 3.72
2650 5185 2.348872 CGTCAATCTGCACTGTCAACAC 60.349 50.000 0.00 0.00 0.00 3.32
2651 5186 1.866601 CGTCAATCTGCACTGTCAACA 59.133 47.619 0.00 0.00 0.00 3.33
2652 5187 2.135139 TCGTCAATCTGCACTGTCAAC 58.865 47.619 0.00 0.00 0.00 3.18
2653 5188 2.524569 TCGTCAATCTGCACTGTCAA 57.475 45.000 0.00 0.00 0.00 3.18
2654 5189 2.340337 CATCGTCAATCTGCACTGTCA 58.660 47.619 0.00 0.00 0.00 3.58
2655 5190 1.662629 CCATCGTCAATCTGCACTGTC 59.337 52.381 0.00 0.00 0.00 3.51
2656 5191 1.002430 ACCATCGTCAATCTGCACTGT 59.998 47.619 0.00 0.00 0.00 3.55
2657 5192 1.730501 ACCATCGTCAATCTGCACTG 58.269 50.000 0.00 0.00 0.00 3.66
2658 5193 2.479566 AACCATCGTCAATCTGCACT 57.520 45.000 0.00 0.00 0.00 4.40
2659 5194 2.226437 ACAAACCATCGTCAATCTGCAC 59.774 45.455 0.00 0.00 0.00 4.57
2660 5195 2.503331 ACAAACCATCGTCAATCTGCA 58.497 42.857 0.00 0.00 0.00 4.41
2661 5196 4.678509 TTACAAACCATCGTCAATCTGC 57.321 40.909 0.00 0.00 0.00 4.26
2662 5197 8.023128 AGAAAATTACAAACCATCGTCAATCTG 58.977 33.333 0.00 0.00 0.00 2.90
2663 5198 8.023128 CAGAAAATTACAAACCATCGTCAATCT 58.977 33.333 0.00 0.00 0.00 2.40
2664 5199 7.807907 ACAGAAAATTACAAACCATCGTCAATC 59.192 33.333 0.00 0.00 0.00 2.67
2665 5200 7.657336 ACAGAAAATTACAAACCATCGTCAAT 58.343 30.769 0.00 0.00 0.00 2.57
2666 5201 7.033530 ACAGAAAATTACAAACCATCGTCAA 57.966 32.000 0.00 0.00 0.00 3.18
2667 5202 6.627395 ACAGAAAATTACAAACCATCGTCA 57.373 33.333 0.00 0.00 0.00 4.35
2668 5203 7.924103 AAACAGAAAATTACAAACCATCGTC 57.076 32.000 0.00 0.00 0.00 4.20
2669 5204 8.710835 AAAAACAGAAAATTACAAACCATCGT 57.289 26.923 0.00 0.00 0.00 3.73
2670 5205 9.030301 AGAAAAACAGAAAATTACAAACCATCG 57.970 29.630 0.00 0.00 0.00 3.84
2672 5207 8.611757 GCAGAAAAACAGAAAATTACAAACCAT 58.388 29.630 0.00 0.00 0.00 3.55
2673 5208 7.604164 TGCAGAAAAACAGAAAATTACAAACCA 59.396 29.630 0.00 0.00 0.00 3.67
2674 5209 7.969314 TGCAGAAAAACAGAAAATTACAAACC 58.031 30.769 0.00 0.00 0.00 3.27
2675 5210 9.986833 ATTGCAGAAAAACAGAAAATTACAAAC 57.013 25.926 0.00 0.00 0.00 2.93
2691 5226 9.820229 CACGTAAACTTAGATTATTGCAGAAAA 57.180 29.630 0.00 0.00 0.00 2.29
2692 5227 9.210329 TCACGTAAACTTAGATTATTGCAGAAA 57.790 29.630 0.00 0.00 0.00 2.52
2693 5228 8.766000 TCACGTAAACTTAGATTATTGCAGAA 57.234 30.769 0.00 0.00 0.00 3.02
2694 5229 8.033038 ACTCACGTAAACTTAGATTATTGCAGA 58.967 33.333 0.00 0.00 0.00 4.26
2695 5230 8.110612 CACTCACGTAAACTTAGATTATTGCAG 58.889 37.037 0.00 0.00 0.00 4.41
2696 5231 7.601130 ACACTCACGTAAACTTAGATTATTGCA 59.399 33.333 0.00 0.00 0.00 4.08
2697 5232 7.898309 CACACTCACGTAAACTTAGATTATTGC 59.102 37.037 0.00 0.00 0.00 3.56
2698 5233 9.135843 TCACACTCACGTAAACTTAGATTATTG 57.864 33.333 0.00 0.00 0.00 1.90
2699 5234 9.136952 GTCACACTCACGTAAACTTAGATTATT 57.863 33.333 0.00 0.00 0.00 1.40
2700 5235 7.758528 GGTCACACTCACGTAAACTTAGATTAT 59.241 37.037 0.00 0.00 0.00 1.28
2701 5236 7.040201 AGGTCACACTCACGTAAACTTAGATTA 60.040 37.037 0.00 0.00 0.00 1.75
2702 5237 5.924825 GGTCACACTCACGTAAACTTAGATT 59.075 40.000 0.00 0.00 0.00 2.40
2703 5238 5.243283 AGGTCACACTCACGTAAACTTAGAT 59.757 40.000 0.00 0.00 0.00 1.98
2704 5239 4.581824 AGGTCACACTCACGTAAACTTAGA 59.418 41.667 0.00 0.00 0.00 2.10
2705 5240 4.868067 AGGTCACACTCACGTAAACTTAG 58.132 43.478 0.00 0.00 0.00 2.18
2706 5241 4.924305 AGGTCACACTCACGTAAACTTA 57.076 40.909 0.00 0.00 0.00 2.24
2707 5242 3.814005 AGGTCACACTCACGTAAACTT 57.186 42.857 0.00 0.00 0.00 2.66
2708 5243 3.383825 AGAAGGTCACACTCACGTAAACT 59.616 43.478 0.00 0.00 0.00 2.66
2709 5244 3.714391 AGAAGGTCACACTCACGTAAAC 58.286 45.455 0.00 0.00 0.00 2.01
2710 5245 5.717078 ATAGAAGGTCACACTCACGTAAA 57.283 39.130 0.00 0.00 0.00 2.01
2711 5246 5.717078 AATAGAAGGTCACACTCACGTAA 57.283 39.130 0.00 0.00 0.00 3.18
2712 5247 5.466819 CAAATAGAAGGTCACACTCACGTA 58.533 41.667 0.00 0.00 0.00 3.57
2713 5248 4.307432 CAAATAGAAGGTCACACTCACGT 58.693 43.478 0.00 0.00 0.00 4.49
2714 5249 3.123621 GCAAATAGAAGGTCACACTCACG 59.876 47.826 0.00 0.00 0.00 4.35
2715 5250 4.319177 AGCAAATAGAAGGTCACACTCAC 58.681 43.478 0.00 0.00 0.00 3.51
2716 5251 4.623932 AGCAAATAGAAGGTCACACTCA 57.376 40.909 0.00 0.00 0.00 3.41
2717 5252 6.478344 CAGATAGCAAATAGAAGGTCACACTC 59.522 42.308 0.00 0.00 0.00 3.51
2718 5253 6.155221 TCAGATAGCAAATAGAAGGTCACACT 59.845 38.462 0.00 0.00 0.00 3.55
2719 5254 6.341316 TCAGATAGCAAATAGAAGGTCACAC 58.659 40.000 0.00 0.00 0.00 3.82
2720 5255 6.544928 TCAGATAGCAAATAGAAGGTCACA 57.455 37.500 0.00 0.00 0.00 3.58
2721 5256 6.018343 GCTTCAGATAGCAAATAGAAGGTCAC 60.018 42.308 0.00 0.00 40.89 3.67
2722 5257 6.051717 GCTTCAGATAGCAAATAGAAGGTCA 58.948 40.000 0.00 0.00 40.89 4.02
2723 5258 6.538189 GCTTCAGATAGCAAATAGAAGGTC 57.462 41.667 0.00 0.00 40.89 3.85
2735 5270 5.237996 TGCACATCTTATTGCTTCAGATAGC 59.762 40.000 0.00 0.00 39.62 2.97
2736 5271 6.856135 TGCACATCTTATTGCTTCAGATAG 57.144 37.500 0.00 0.00 39.62 2.08
2737 5272 6.038603 GGTTGCACATCTTATTGCTTCAGATA 59.961 38.462 0.00 0.00 39.62 1.98
2738 5273 5.163581 GGTTGCACATCTTATTGCTTCAGAT 60.164 40.000 0.00 0.00 39.62 2.90
2739 5274 4.156556 GGTTGCACATCTTATTGCTTCAGA 59.843 41.667 0.00 0.00 39.62 3.27
2740 5275 4.418392 GGTTGCACATCTTATTGCTTCAG 58.582 43.478 0.00 0.00 39.62 3.02
2741 5276 3.193267 GGGTTGCACATCTTATTGCTTCA 59.807 43.478 0.00 0.00 39.62 3.02
2742 5277 3.193267 TGGGTTGCACATCTTATTGCTTC 59.807 43.478 0.00 0.00 39.62 3.86
2743 5278 3.164268 TGGGTTGCACATCTTATTGCTT 58.836 40.909 0.00 0.00 39.62 3.91
2744 5279 2.806434 TGGGTTGCACATCTTATTGCT 58.194 42.857 0.00 0.00 39.62 3.91
2745 5280 3.806625 ATGGGTTGCACATCTTATTGC 57.193 42.857 0.00 0.00 39.33 3.56
2746 5281 6.698008 TCTAATGGGTTGCACATCTTATTG 57.302 37.500 0.00 0.00 0.00 1.90
2747 5282 7.147846 CCTTTCTAATGGGTTGCACATCTTATT 60.148 37.037 0.00 0.00 0.00 1.40
2748 5283 6.322201 CCTTTCTAATGGGTTGCACATCTTAT 59.678 38.462 0.00 0.00 0.00 1.73
2749 5284 5.652014 CCTTTCTAATGGGTTGCACATCTTA 59.348 40.000 0.00 0.00 0.00 2.10
2750 5285 4.463891 CCTTTCTAATGGGTTGCACATCTT 59.536 41.667 0.00 0.00 0.00 2.40
2751 5286 4.019174 CCTTTCTAATGGGTTGCACATCT 58.981 43.478 0.00 0.00 0.00 2.90
2752 5287 3.131046 CCCTTTCTAATGGGTTGCACATC 59.869 47.826 5.66 0.00 38.30 3.06
2753 5288 3.099141 CCCTTTCTAATGGGTTGCACAT 58.901 45.455 5.66 0.00 38.30 3.21
2754 5289 2.524306 CCCTTTCTAATGGGTTGCACA 58.476 47.619 5.66 0.00 38.30 4.57
2755 5290 1.824852 CCCCTTTCTAATGGGTTGCAC 59.175 52.381 11.56 0.00 40.78 4.57
2756 5291 1.894978 GCCCCTTTCTAATGGGTTGCA 60.895 52.381 11.56 0.00 40.78 4.08
2757 5292 0.824109 GCCCCTTTCTAATGGGTTGC 59.176 55.000 11.56 6.17 40.78 4.17
2758 5293 2.532250 AGCCCCTTTCTAATGGGTTG 57.468 50.000 11.56 0.79 40.78 3.77
2759 5294 3.173151 CAAAGCCCCTTTCTAATGGGTT 58.827 45.455 11.56 0.00 40.78 4.11
2760 5295 2.559705 CCAAAGCCCCTTTCTAATGGGT 60.560 50.000 11.56 0.00 40.78 4.51
2761 5296 2.110578 CCAAAGCCCCTTTCTAATGGG 58.889 52.381 6.68 6.68 41.75 4.00
2762 5297 2.110578 CCCAAAGCCCCTTTCTAATGG 58.889 52.381 0.00 0.00 30.60 3.16
2763 5298 2.110578 CCCCAAAGCCCCTTTCTAATG 58.889 52.381 0.00 0.00 30.60 1.90
2764 5299 1.622449 GCCCCAAAGCCCCTTTCTAAT 60.622 52.381 0.00 0.00 30.60 1.73
2765 5300 0.252057 GCCCCAAAGCCCCTTTCTAA 60.252 55.000 0.00 0.00 30.60 2.10
2766 5301 1.386550 GCCCCAAAGCCCCTTTCTA 59.613 57.895 0.00 0.00 30.60 2.10
2767 5302 2.110782 ATGCCCCAAAGCCCCTTTCT 62.111 55.000 0.00 0.00 30.60 2.52
2768 5303 1.613332 ATGCCCCAAAGCCCCTTTC 60.613 57.895 0.00 0.00 30.60 2.62
2769 5304 1.919816 CATGCCCCAAAGCCCCTTT 60.920 57.895 0.00 0.00 33.58 3.11
2770 5305 2.284847 CATGCCCCAAAGCCCCTT 60.285 61.111 0.00 0.00 0.00 3.95
2771 5306 3.604133 ACATGCCCCAAAGCCCCT 61.604 61.111 0.00 0.00 0.00 4.79
2772 5307 3.076916 GACATGCCCCAAAGCCCC 61.077 66.667 0.00 0.00 0.00 5.80
2773 5308 2.037847 AGACATGCCCCAAAGCCC 59.962 61.111 0.00 0.00 0.00 5.19
2774 5309 0.899717 TTCAGACATGCCCCAAAGCC 60.900 55.000 0.00 0.00 0.00 4.35
2775 5310 1.135721 GATTCAGACATGCCCCAAAGC 59.864 52.381 0.00 0.00 0.00 3.51
2776 5311 1.753073 GGATTCAGACATGCCCCAAAG 59.247 52.381 0.00 0.00 0.00 2.77
2777 5312 1.358787 AGGATTCAGACATGCCCCAAA 59.641 47.619 0.00 0.00 0.00 3.28
2778 5313 1.002069 AGGATTCAGACATGCCCCAA 58.998 50.000 0.00 0.00 0.00 4.12
2779 5314 1.770658 CTAGGATTCAGACATGCCCCA 59.229 52.381 0.00 0.00 0.00 4.96
2780 5315 1.072965 CCTAGGATTCAGACATGCCCC 59.927 57.143 1.05 0.00 0.00 5.80
2781 5316 2.050144 TCCTAGGATTCAGACATGCCC 58.950 52.381 7.62 0.00 0.00 5.36
2782 5317 3.845781 TTCCTAGGATTCAGACATGCC 57.154 47.619 13.57 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.