Multiple sequence alignment - TraesCS7D01G033900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G033900 chr7D 100.000 3144 0 0 1 3144 17349703 17346560 0.000000e+00 5806.0
1 TraesCS7D01G033900 chr4A 93.674 1233 71 5 600 1826 716952398 716953629 0.000000e+00 1838.0
2 TraesCS7D01G033900 chr4A 90.840 655 32 15 2417 3060 716896287 716896924 0.000000e+00 852.0
3 TraesCS7D01G033900 chr4A 90.840 655 32 15 2417 3060 716925813 716926450 0.000000e+00 852.0
4 TraesCS7D01G033900 chr4A 89.941 338 32 2 1 338 716948494 716948829 4.820000e-118 435.0
5 TraesCS7D01G033900 chr4A 90.521 211 20 0 505 715 716889531 716889741 2.390000e-71 279.0
6 TraesCS7D01G033900 chr4A 90.521 211 20 0 505 715 716919641 716919851 2.390000e-71 279.0
7 TraesCS7D01G033900 chr4A 96.825 126 2 2 3021 3144 716953634 716953759 3.180000e-50 209.0
8 TraesCS7D01G033900 chr4A 91.892 148 8 1 343 490 716949099 716949242 1.480000e-48 204.0
9 TraesCS7D01G033900 chr7A 96.916 908 25 1 1134 2041 16708016 16707112 0.000000e+00 1519.0
10 TraesCS7D01G033900 chr7A 90.835 491 38 4 343 827 16708504 16708015 0.000000e+00 651.0
11 TraesCS7D01G033900 chrUn 90.840 655 32 15 2417 3060 344381234 344381871 0.000000e+00 852.0
12 TraesCS7D01G033900 chrUn 90.840 655 32 15 2417 3060 344383665 344384302 0.000000e+00 852.0
13 TraesCS7D01G033900 chrUn 90.521 211 20 0 505 715 325014118 325014328 2.390000e-71 279.0
14 TraesCS7D01G033900 chrUn 90.521 211 20 0 505 715 325017238 325017448 2.390000e-71 279.0
15 TraesCS7D01G033900 chrUn 93.407 91 6 0 2258 2348 24007780 24007690 5.470000e-28 135.0
16 TraesCS7D01G033900 chrUn 93.407 91 6 0 2258 2348 384627929 384628019 5.470000e-28 135.0
17 TraesCS7D01G033900 chrUn 93.407 91 6 0 2258 2348 436767400 436767310 5.470000e-28 135.0
18 TraesCS7D01G033900 chr5A 88.961 154 12 4 2250 2403 631739790 631739938 5.350000e-43 185.0
19 TraesCS7D01G033900 chr2D 73.308 532 111 23 1418 1941 85390030 85390538 1.940000e-37 167.0
20 TraesCS7D01G033900 chr3D 84.483 58 9 0 2416 2473 3011121 3011178 1.220000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G033900 chr7D 17346560 17349703 3143 True 5806.0 5806 100.0000 1 3144 1 chr7D.!!$R1 3143
1 TraesCS7D01G033900 chr4A 716896287 716896924 637 False 852.0 852 90.8400 2417 3060 1 chr4A.!!$F2 643
2 TraesCS7D01G033900 chr4A 716925813 716926450 637 False 852.0 852 90.8400 2417 3060 1 chr4A.!!$F4 643
3 TraesCS7D01G033900 chr4A 716948494 716953759 5265 False 671.5 1838 93.0830 1 3144 4 chr4A.!!$F5 3143
4 TraesCS7D01G033900 chr7A 16707112 16708504 1392 True 1085.0 1519 93.8755 343 2041 2 chr7A.!!$R1 1698
5 TraesCS7D01G033900 chrUn 344381234 344384302 3068 False 852.0 852 90.8400 2417 3060 2 chrUn.!!$F3 643
6 TraesCS7D01G033900 chrUn 325014118 325017448 3330 False 279.0 279 90.5210 505 715 2 chrUn.!!$F2 210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 660 0.095935 ACCGAACGTACTCATCGACG 59.904 55.0 8.1 0.0 44.57 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 8791 0.111061 TGTTGTGGATGCTGCTTCCT 59.889 50.0 28.16 0.76 34.17 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.349006 CAGCGTTGGCGACTGCTT 61.349 61.111 17.61 5.22 46.35 3.91
77 78 1.268845 GGTGGTGTTTTGCTACAACCG 60.269 52.381 0.00 0.00 34.80 4.44
114 115 0.320771 GAACCGACACCTGCAGATGT 60.321 55.000 15.40 15.40 0.00 3.06
118 119 0.320683 CGACACCTGCAGATGTTGGA 60.321 55.000 19.71 0.00 0.00 3.53
130 131 2.770802 AGATGTTGGAGATGACAGAGGG 59.229 50.000 0.00 0.00 0.00 4.30
137 138 0.326904 AGATGACAGAGGGCATGGGA 60.327 55.000 0.00 0.00 0.00 4.37
208 209 1.617850 TGAATGGCGGCTTTTGTTCAT 59.382 42.857 11.43 0.00 0.00 2.57
272 273 4.529219 TAGCATGTCCTGGCGGCG 62.529 66.667 0.51 0.51 34.54 6.46
300 301 1.835121 TTTCGTAGACATGCGATCCG 58.165 50.000 0.00 0.00 43.24 4.18
303 304 2.419667 TCGTAGACATGCGATCCGATA 58.580 47.619 0.00 0.00 38.70 2.92
310 311 2.738846 ACATGCGATCCGATATTCTTGC 59.261 45.455 0.00 0.00 0.00 4.01
319 320 2.033407 CCGATATTCTTGCTCGCTTGTG 60.033 50.000 0.00 0.00 0.00 3.33
338 339 6.479990 GCTTGTGCCAAGTTTTAGAAAGAAAT 59.520 34.615 14.04 0.00 0.00 2.17
339 340 7.651704 GCTTGTGCCAAGTTTTAGAAAGAAATA 59.348 33.333 14.04 0.00 0.00 1.40
355 621 7.509659 AGAAAGAAATATACCTACCTCGGACAT 59.490 37.037 0.00 0.00 0.00 3.06
358 624 5.979288 AATATACCTACCTCGGACATCAC 57.021 43.478 0.00 0.00 0.00 3.06
376 642 1.104630 ACGTCTAAGGCTAGCTCCAC 58.895 55.000 15.72 3.95 0.00 4.02
379 645 0.257905 TCTAAGGCTAGCTCCACCGA 59.742 55.000 15.72 1.51 0.00 4.69
380 646 1.112113 CTAAGGCTAGCTCCACCGAA 58.888 55.000 15.72 0.00 0.00 4.30
381 647 0.822164 TAAGGCTAGCTCCACCGAAC 59.178 55.000 15.72 0.00 0.00 3.95
382 648 2.202756 GGCTAGCTCCACCGAACG 60.203 66.667 15.72 0.00 0.00 3.95
383 649 2.572284 GCTAGCTCCACCGAACGT 59.428 61.111 7.70 0.00 0.00 3.99
384 650 1.660560 GGCTAGCTCCACCGAACGTA 61.661 60.000 15.72 0.00 0.00 3.57
385 651 0.525029 GCTAGCTCCACCGAACGTAC 60.525 60.000 7.70 0.00 0.00 3.67
386 652 1.093159 CTAGCTCCACCGAACGTACT 58.907 55.000 0.00 0.00 0.00 2.73
387 653 1.063764 CTAGCTCCACCGAACGTACTC 59.936 57.143 0.00 0.00 0.00 2.59
388 654 0.892358 AGCTCCACCGAACGTACTCA 60.892 55.000 0.00 0.00 0.00 3.41
389 655 0.172803 GCTCCACCGAACGTACTCAT 59.827 55.000 0.00 0.00 0.00 2.90
390 656 1.798079 GCTCCACCGAACGTACTCATC 60.798 57.143 0.00 0.00 0.00 2.92
391 657 0.448990 TCCACCGAACGTACTCATCG 59.551 55.000 0.00 0.00 36.39 3.84
392 658 0.448990 CCACCGAACGTACTCATCGA 59.551 55.000 8.10 0.00 38.82 3.59
393 659 1.531912 CACCGAACGTACTCATCGAC 58.468 55.000 8.10 0.00 38.82 4.20
394 660 0.095935 ACCGAACGTACTCATCGACG 59.904 55.000 8.10 0.00 44.57 5.12
395 661 1.192436 CCGAACGTACTCATCGACGC 61.192 60.000 8.10 0.00 42.81 5.19
396 662 1.510524 CGAACGTACTCATCGACGCG 61.511 60.000 3.53 3.53 42.81 6.01
397 663 0.247419 GAACGTACTCATCGACGCGA 60.247 55.000 15.93 4.51 42.81 5.87
398 664 0.519999 AACGTACTCATCGACGCGAC 60.520 55.000 15.93 5.54 42.81 5.19
399 665 1.059838 CGTACTCATCGACGCGACA 59.940 57.895 15.93 0.00 39.18 4.35
400 666 0.519792 CGTACTCATCGACGCGACAA 60.520 55.000 15.93 0.00 39.18 3.18
401 667 1.181001 GTACTCATCGACGCGACAAG 58.819 55.000 15.93 4.38 39.18 3.16
402 668 0.522705 TACTCATCGACGCGACAAGC 60.523 55.000 15.93 0.00 39.18 4.01
416 682 4.778143 AAGCACCGCCGGCCTTAG 62.778 66.667 23.46 10.03 0.00 2.18
419 685 4.778143 CACCGCCGGCCTTAGCTT 62.778 66.667 23.46 0.00 39.73 3.74
420 686 3.078836 ACCGCCGGCCTTAGCTTA 61.079 61.111 23.46 0.00 39.73 3.09
421 687 2.188469 CCGCCGGCCTTAGCTTAA 59.812 61.111 23.46 0.00 39.73 1.85
422 688 1.227853 CCGCCGGCCTTAGCTTAAT 60.228 57.895 23.46 0.00 39.73 1.40
423 689 0.818040 CCGCCGGCCTTAGCTTAATT 60.818 55.000 23.46 0.00 39.73 1.40
424 690 1.541670 CCGCCGGCCTTAGCTTAATTA 60.542 52.381 23.46 0.00 39.73 1.40
425 691 2.215196 CGCCGGCCTTAGCTTAATTAA 58.785 47.619 23.46 0.00 39.73 1.40
426 692 2.812011 CGCCGGCCTTAGCTTAATTAAT 59.188 45.455 23.46 0.00 39.73 1.40
427 693 3.252458 CGCCGGCCTTAGCTTAATTAATT 59.748 43.478 23.46 5.89 39.73 1.40
428 694 4.453136 CGCCGGCCTTAGCTTAATTAATTA 59.547 41.667 23.46 3.71 39.73 1.40
429 695 5.616204 CGCCGGCCTTAGCTTAATTAATTAC 60.616 44.000 23.46 0.00 39.73 1.89
430 696 5.472478 GCCGGCCTTAGCTTAATTAATTACT 59.528 40.000 18.11 5.65 39.73 2.24
431 697 6.348295 GCCGGCCTTAGCTTAATTAATTACTC 60.348 42.308 18.11 3.15 39.73 2.59
432 698 6.935208 CCGGCCTTAGCTTAATTAATTACTCT 59.065 38.462 7.43 9.71 39.73 3.24
433 699 7.117956 CCGGCCTTAGCTTAATTAATTACTCTC 59.882 40.741 7.43 0.00 39.73 3.20
434 700 7.117956 CGGCCTTAGCTTAATTAATTACTCTCC 59.882 40.741 7.43 4.95 39.73 3.71
435 701 8.158132 GGCCTTAGCTTAATTAATTACTCTCCT 58.842 37.037 7.43 3.36 39.73 3.69
436 702 9.210329 GCCTTAGCTTAATTAATTACTCTCCTC 57.790 37.037 7.43 0.00 35.50 3.71
437 703 9.413048 CCTTAGCTTAATTAATTACTCTCCTCG 57.587 37.037 7.43 0.00 0.00 4.63
438 704 8.813643 TTAGCTTAATTAATTACTCTCCTCGC 57.186 34.615 7.43 0.00 0.00 5.03
439 705 6.224584 AGCTTAATTAATTACTCTCCTCGCC 58.775 40.000 7.43 0.00 0.00 5.54
440 706 5.118817 GCTTAATTAATTACTCTCCTCGCCG 59.881 44.000 7.43 0.00 0.00 6.46
441 707 3.662247 ATTAATTACTCTCCTCGCCGG 57.338 47.619 0.00 0.00 0.00 6.13
442 708 0.672342 TAATTACTCTCCTCGCCGGC 59.328 55.000 19.07 19.07 0.00 6.13
443 709 2.029307 AATTACTCTCCTCGCCGGCC 62.029 60.000 23.46 2.84 0.00 6.13
459 725 4.996434 CCGGCCGGCTCATCATCC 62.996 72.222 34.96 5.59 0.00 3.51
469 735 4.527509 GGCTCATCATCCGATAAGAAGA 57.472 45.455 0.00 0.00 0.00 2.87
470 736 4.887748 GGCTCATCATCCGATAAGAAGAA 58.112 43.478 0.00 0.00 0.00 2.52
471 737 4.688413 GGCTCATCATCCGATAAGAAGAAC 59.312 45.833 0.00 0.00 0.00 3.01
472 738 5.292765 GCTCATCATCCGATAAGAAGAACA 58.707 41.667 0.00 0.00 0.00 3.18
473 739 5.176590 GCTCATCATCCGATAAGAAGAACAC 59.823 44.000 0.00 0.00 0.00 3.32
474 740 6.220726 TCATCATCCGATAAGAAGAACACA 57.779 37.500 0.00 0.00 0.00 3.72
475 741 6.042777 TCATCATCCGATAAGAAGAACACAC 58.957 40.000 0.00 0.00 0.00 3.82
476 742 4.421058 TCATCCGATAAGAAGAACACACG 58.579 43.478 0.00 0.00 0.00 4.49
477 743 3.928727 TCCGATAAGAAGAACACACGT 57.071 42.857 0.00 0.00 0.00 4.49
478 744 5.124297 TCATCCGATAAGAAGAACACACGTA 59.876 40.000 0.00 0.00 0.00 3.57
479 745 4.726416 TCCGATAAGAAGAACACACGTAC 58.274 43.478 0.00 0.00 0.00 3.67
480 746 3.541130 CCGATAAGAAGAACACACGTACG 59.459 47.826 15.01 15.01 0.00 3.67
481 747 3.002344 CGATAAGAAGAACACACGTACGC 60.002 47.826 16.72 0.00 0.00 4.42
482 748 1.126079 AAGAAGAACACACGTACGCG 58.874 50.000 16.72 8.78 44.93 6.01
483 749 1.127225 GAAGAACACACGTACGCGC 59.873 57.895 16.72 0.00 42.83 6.86
484 750 2.510308 GAAGAACACACGTACGCGCG 62.510 60.000 30.96 30.96 42.83 6.86
485 751 3.389211 GAACACACGTACGCGCGT 61.389 61.111 39.05 39.05 46.88 6.01
486 752 2.919860 GAACACACGTACGCGCGTT 61.920 57.895 42.10 21.66 43.83 4.84
487 753 2.769472 GAACACACGTACGCGCGTTC 62.769 60.000 42.10 33.87 43.83 3.95
488 754 4.443263 CACACGTACGCGCGTTCG 62.443 66.667 44.77 44.77 43.83 3.95
493 759 3.530104 GTACGCGCGTTCGAGGTG 61.530 66.667 42.10 6.11 39.86 4.00
494 760 4.764336 TACGCGCGTTCGAGGTGG 62.764 66.667 42.10 5.23 39.86 4.61
496 762 4.764336 CGCGCGTTCGAGGTGGTA 62.764 66.667 24.19 0.00 38.10 3.25
497 763 3.177249 GCGCGTTCGAGGTGGTAC 61.177 66.667 8.43 0.00 38.10 3.34
498 764 2.872925 CGCGTTCGAGGTGGTACG 60.873 66.667 0.00 0.84 38.10 3.67
499 765 2.256461 GCGTTCGAGGTGGTACGT 59.744 61.111 6.90 0.00 36.45 3.57
500 766 1.501741 GCGTTCGAGGTGGTACGTA 59.498 57.895 6.90 0.00 36.45 3.57
501 767 0.794605 GCGTTCGAGGTGGTACGTAC 60.795 60.000 17.56 17.56 36.45 3.67
502 768 0.519175 CGTTCGAGGTGGTACGTACG 60.519 60.000 18.98 15.01 43.51 3.67
503 769 0.517316 GTTCGAGGTGGTACGTACGT 59.483 55.000 25.98 25.98 0.00 3.57
539 805 4.749310 CAGCAGCCGCGGAAGAGT 62.749 66.667 33.48 5.31 45.49 3.24
549 6640 2.126031 GGAAGAGTGCCGGTCGAC 60.126 66.667 7.13 7.13 0.00 4.20
560 6651 3.986006 GGTCGACCACTCACCGCA 61.986 66.667 29.75 0.00 35.64 5.69
630 7096 5.586155 TGATTACCCCACCTTCTTTGTTA 57.414 39.130 0.00 0.00 0.00 2.41
648 7114 5.209818 TGTTACTCGAGTCTTTGTCCAAT 57.790 39.130 23.89 0.00 0.00 3.16
721 7187 4.766891 TGGATTTTCCAAACTGAGATCCAC 59.233 41.667 0.00 0.00 45.00 4.02
789 7261 5.140177 GCTTATCGTAGCCATGAAAATTCG 58.860 41.667 0.00 0.00 35.06 3.34
814 7286 9.214953 CGTGAAGCTTGATTATTTTCTCAATAC 57.785 33.333 2.10 0.00 31.39 1.89
841 7313 1.981256 TGGTCCTTCTTGTTTGCCTC 58.019 50.000 0.00 0.00 0.00 4.70
899 7371 9.827411 GCTCTACTAACCTTAAATTTTTCACAG 57.173 33.333 0.00 0.00 0.00 3.66
926 7398 3.807631 AAGTCGCTGTTGCTGCCGA 62.808 57.895 0.00 0.00 36.97 5.54
943 7415 3.343788 GACAGGCCGTCCGTCTCAG 62.344 68.421 14.46 0.00 38.85 3.35
1038 7510 2.639347 TGCTCTCCTGAGTTCATTCCAA 59.361 45.455 0.00 0.00 42.13 3.53
1044 7516 5.072329 TCTCCTGAGTTCATTCCAAGACTTT 59.928 40.000 0.00 0.00 0.00 2.66
1133 7605 3.330720 CTTTCCCCCGCTCCACCT 61.331 66.667 0.00 0.00 0.00 4.00
1480 7952 4.039973 TCCTTTGTTCGAACACCTCTATGT 59.960 41.667 29.74 0.00 38.92 2.29
1599 8071 2.562738 TGCCATCGACTTTCTTCAGAGA 59.437 45.455 0.00 0.00 0.00 3.10
1653 8125 2.189594 TGCATGAAGTAGCAGCTGTT 57.810 45.000 16.64 12.62 35.51 3.16
1661 8133 1.007238 AGTAGCAGCTGTTAGGGGAGA 59.993 52.381 16.64 0.00 0.00 3.71
1769 8241 3.935203 GACGAACTATATGGCATCCATGG 59.065 47.826 4.97 4.97 44.84 3.66
1773 8245 5.937540 CGAACTATATGGCATCCATGGTAAA 59.062 40.000 12.58 0.00 44.84 2.01
1778 8250 7.949565 ACTATATGGCATCCATGGTAAATTTCA 59.050 33.333 12.58 3.26 44.84 2.69
1781 8253 4.161942 TGGCATCCATGGTAAATTTCAAGG 59.838 41.667 12.58 0.00 0.00 3.61
1947 8419 4.881273 TGCATTTATGTTGCGAGACCTATT 59.119 37.500 0.00 0.00 43.10 1.73
2014 8486 2.031012 CGAGCACAACCAGAGCCA 59.969 61.111 0.00 0.00 33.99 4.75
2030 8502 5.374921 CAGAGCCATTTCATCCAGTCTAAT 58.625 41.667 0.00 0.00 0.00 1.73
2041 8513 4.732106 GTCTAATGAGACCGCCGG 57.268 61.111 0.00 0.00 45.61 6.13
2042 8514 1.067582 GTCTAATGAGACCGCCGGG 59.932 63.158 8.57 0.00 45.61 5.73
2043 8515 2.131709 TCTAATGAGACCGCCGGGG 61.132 63.158 12.43 12.43 43.62 5.73
2044 8516 3.158648 TAATGAGACCGCCGGGGG 61.159 66.667 34.39 34.39 41.60 5.40
2045 8517 3.682644 TAATGAGACCGCCGGGGGA 62.683 63.158 41.39 21.51 41.60 4.81
2046 8518 2.957902 TAATGAGACCGCCGGGGGAT 62.958 60.000 41.39 28.80 41.60 3.85
2049 8521 4.880426 AGACCGCCGGGGGATGAT 62.880 66.667 41.39 21.37 41.60 2.45
2050 8522 4.626081 GACCGCCGGGGGATGATG 62.626 72.222 41.39 16.24 41.60 3.07
2055 8527 3.583380 CCGGGGGATGATGGCCAT 61.583 66.667 20.96 20.96 38.43 4.40
2056 8528 2.522503 CGGGGGATGATGGCCATT 59.477 61.111 21.84 4.19 35.17 3.16
2057 8529 1.152483 CGGGGGATGATGGCCATTT 60.152 57.895 21.84 11.01 35.17 2.32
2058 8530 1.181098 CGGGGGATGATGGCCATTTC 61.181 60.000 21.84 19.02 35.17 2.17
2059 8531 0.105555 GGGGGATGATGGCCATTTCA 60.106 55.000 21.84 16.17 35.17 2.69
2060 8532 1.692121 GGGGGATGATGGCCATTTCAA 60.692 52.381 21.84 6.75 35.17 2.69
2061 8533 1.413812 GGGGATGATGGCCATTTCAAC 59.586 52.381 21.84 13.73 35.17 3.18
2062 8534 1.413812 GGGATGATGGCCATTTCAACC 59.586 52.381 21.84 21.76 35.17 3.77
2063 8535 2.109774 GGATGATGGCCATTTCAACCA 58.890 47.619 23.82 15.69 35.51 3.67
2064 8536 2.101917 GGATGATGGCCATTTCAACCAG 59.898 50.000 23.82 0.00 36.78 4.00
2065 8537 2.601240 TGATGGCCATTTCAACCAGA 57.399 45.000 21.84 0.00 36.78 3.86
2066 8538 2.449464 TGATGGCCATTTCAACCAGAG 58.551 47.619 21.84 0.00 36.78 3.35
2067 8539 1.135721 GATGGCCATTTCAACCAGAGC 59.864 52.381 21.84 0.00 36.78 4.09
2068 8540 0.899717 TGGCCATTTCAACCAGAGCC 60.900 55.000 0.00 0.00 35.13 4.70
2069 8541 0.899717 GGCCATTTCAACCAGAGCCA 60.900 55.000 0.00 0.00 34.79 4.75
2070 8542 1.188863 GCCATTTCAACCAGAGCCAT 58.811 50.000 0.00 0.00 0.00 4.40
2071 8543 1.551883 GCCATTTCAACCAGAGCCATT 59.448 47.619 0.00 0.00 0.00 3.16
2072 8544 2.027837 GCCATTTCAACCAGAGCCATTT 60.028 45.455 0.00 0.00 0.00 2.32
2073 8545 3.853475 CCATTTCAACCAGAGCCATTTC 58.147 45.455 0.00 0.00 0.00 2.17
2074 8546 3.258872 CCATTTCAACCAGAGCCATTTCA 59.741 43.478 0.00 0.00 0.00 2.69
2075 8547 4.081309 CCATTTCAACCAGAGCCATTTCAT 60.081 41.667 0.00 0.00 0.00 2.57
2076 8548 4.789012 TTTCAACCAGAGCCATTTCATC 57.211 40.909 0.00 0.00 0.00 2.92
2077 8549 2.726821 TCAACCAGAGCCATTTCATCC 58.273 47.619 0.00 0.00 0.00 3.51
2078 8550 2.041485 TCAACCAGAGCCATTTCATCCA 59.959 45.455 0.00 0.00 0.00 3.41
2079 8551 3.028850 CAACCAGAGCCATTTCATCCAT 58.971 45.455 0.00 0.00 0.00 3.41
2080 8552 3.393426 ACCAGAGCCATTTCATCCATT 57.607 42.857 0.00 0.00 0.00 3.16
2081 8553 3.716431 ACCAGAGCCATTTCATCCATTT 58.284 40.909 0.00 0.00 0.00 2.32
2082 8554 3.703052 ACCAGAGCCATTTCATCCATTTC 59.297 43.478 0.00 0.00 0.00 2.17
2083 8555 3.702548 CCAGAGCCATTTCATCCATTTCA 59.297 43.478 0.00 0.00 0.00 2.69
2084 8556 4.344102 CCAGAGCCATTTCATCCATTTCAT 59.656 41.667 0.00 0.00 0.00 2.57
2085 8557 5.509163 CCAGAGCCATTTCATCCATTTCATC 60.509 44.000 0.00 0.00 0.00 2.92
2086 8558 4.587684 AGAGCCATTTCATCCATTTCATCC 59.412 41.667 0.00 0.00 0.00 3.51
2087 8559 4.291792 AGCCATTTCATCCATTTCATCCA 58.708 39.130 0.00 0.00 0.00 3.41
2088 8560 4.344102 AGCCATTTCATCCATTTCATCCAG 59.656 41.667 0.00 0.00 0.00 3.86
2089 8561 4.100498 GCCATTTCATCCATTTCATCCAGT 59.900 41.667 0.00 0.00 0.00 4.00
2090 8562 5.738208 GCCATTTCATCCATTTCATCCAGTC 60.738 44.000 0.00 0.00 0.00 3.51
2091 8563 5.361571 CCATTTCATCCATTTCATCCAGTCA 59.638 40.000 0.00 0.00 0.00 3.41
2092 8564 6.127281 CCATTTCATCCATTTCATCCAGTCAA 60.127 38.462 0.00 0.00 0.00 3.18
2093 8565 5.902613 TTCATCCATTTCATCCAGTCAAC 57.097 39.130 0.00 0.00 0.00 3.18
2094 8566 5.183530 TCATCCATTTCATCCAGTCAACT 57.816 39.130 0.00 0.00 0.00 3.16
2095 8567 4.945543 TCATCCATTTCATCCAGTCAACTG 59.054 41.667 3.08 3.08 43.40 3.16
2107 8579 3.866651 CAGTCAACTGGAGAACCTATGG 58.133 50.000 2.08 0.00 40.20 2.74
2108 8580 2.840651 AGTCAACTGGAGAACCTATGGG 59.159 50.000 0.00 0.00 37.04 4.00
2109 8581 5.848184 CAGTCAACTGGAGAACCTATGGGT 61.848 50.000 0.00 0.00 43.02 4.51
2110 8582 2.571653 TCAACTGGAGAACCTATGGGTG 59.428 50.000 0.00 0.00 46.67 4.61
2111 8583 0.912486 ACTGGAGAACCTATGGGTGC 59.088 55.000 0.00 0.00 46.67 5.01
2131 8603 3.742433 CTCCCGAGCTCTGTTTATGAT 57.258 47.619 12.85 0.00 0.00 2.45
2132 8604 4.065321 CTCCCGAGCTCTGTTTATGATT 57.935 45.455 12.85 0.00 0.00 2.57
2133 8605 4.446371 CTCCCGAGCTCTGTTTATGATTT 58.554 43.478 12.85 0.00 0.00 2.17
2134 8606 4.442706 TCCCGAGCTCTGTTTATGATTTC 58.557 43.478 12.85 0.00 0.00 2.17
2135 8607 3.246226 CCCGAGCTCTGTTTATGATTTCG 59.754 47.826 12.85 0.00 0.00 3.46
2136 8608 3.246226 CCGAGCTCTGTTTATGATTTCGG 59.754 47.826 12.85 0.00 39.02 4.30
2137 8609 4.112634 CGAGCTCTGTTTATGATTTCGGA 58.887 43.478 12.85 0.00 0.00 4.55
2138 8610 4.026475 CGAGCTCTGTTTATGATTTCGGAC 60.026 45.833 12.85 0.00 0.00 4.79
2139 8611 4.832248 AGCTCTGTTTATGATTTCGGACA 58.168 39.130 0.00 0.00 0.00 4.02
2140 8612 4.872691 AGCTCTGTTTATGATTTCGGACAG 59.127 41.667 0.00 0.00 36.68 3.51
2141 8613 4.631813 GCTCTGTTTATGATTTCGGACAGT 59.368 41.667 0.00 0.00 36.70 3.55
2142 8614 5.446473 GCTCTGTTTATGATTTCGGACAGTG 60.446 44.000 0.00 0.00 36.70 3.66
2143 8615 5.789521 TCTGTTTATGATTTCGGACAGTGA 58.210 37.500 0.00 0.00 36.70 3.41
2144 8616 5.869344 TCTGTTTATGATTTCGGACAGTGAG 59.131 40.000 0.00 0.00 36.70 3.51
2145 8617 4.391830 TGTTTATGATTTCGGACAGTGAGC 59.608 41.667 0.00 0.00 0.00 4.26
2146 8618 2.029838 ATGATTTCGGACAGTGAGCC 57.970 50.000 0.00 0.00 0.00 4.70
2147 8619 0.684535 TGATTTCGGACAGTGAGCCA 59.315 50.000 0.00 0.00 0.00 4.75
2148 8620 1.278985 TGATTTCGGACAGTGAGCCAT 59.721 47.619 0.00 0.00 0.00 4.40
2149 8621 2.290260 TGATTTCGGACAGTGAGCCATT 60.290 45.455 0.00 0.00 0.00 3.16
2150 8622 3.055458 TGATTTCGGACAGTGAGCCATTA 60.055 43.478 0.00 0.00 0.00 1.90
2151 8623 3.627395 TTTCGGACAGTGAGCCATTAT 57.373 42.857 0.00 0.00 0.00 1.28
2152 8624 3.627395 TTCGGACAGTGAGCCATTATT 57.373 42.857 0.00 0.00 0.00 1.40
2153 8625 2.905075 TCGGACAGTGAGCCATTATTG 58.095 47.619 0.00 0.00 0.00 1.90
2154 8626 2.236146 TCGGACAGTGAGCCATTATTGT 59.764 45.455 0.00 0.00 0.00 2.71
2155 8627 3.009723 CGGACAGTGAGCCATTATTGTT 58.990 45.455 0.00 0.00 0.00 2.83
2156 8628 3.181507 CGGACAGTGAGCCATTATTGTTG 60.182 47.826 0.00 0.00 0.00 3.33
2157 8629 4.009675 GGACAGTGAGCCATTATTGTTGA 58.990 43.478 0.00 0.00 0.00 3.18
2158 8630 4.095483 GGACAGTGAGCCATTATTGTTGAG 59.905 45.833 0.00 0.00 0.00 3.02
2159 8631 4.910195 ACAGTGAGCCATTATTGTTGAGA 58.090 39.130 0.00 0.00 0.00 3.27
2160 8632 5.316167 ACAGTGAGCCATTATTGTTGAGAA 58.684 37.500 0.00 0.00 0.00 2.87
2161 8633 5.769662 ACAGTGAGCCATTATTGTTGAGAAA 59.230 36.000 0.00 0.00 0.00 2.52
2162 8634 6.435277 ACAGTGAGCCATTATTGTTGAGAAAT 59.565 34.615 0.00 0.00 0.00 2.17
2163 8635 6.750501 CAGTGAGCCATTATTGTTGAGAAATG 59.249 38.462 0.00 0.00 0.00 2.32
2164 8636 6.660521 AGTGAGCCATTATTGTTGAGAAATGA 59.339 34.615 0.00 0.00 32.29 2.57
2165 8637 7.341256 AGTGAGCCATTATTGTTGAGAAATGAT 59.659 33.333 0.00 0.00 32.29 2.45
2166 8638 8.623903 GTGAGCCATTATTGTTGAGAAATGATA 58.376 33.333 0.00 0.00 32.29 2.15
2167 8639 9.358406 TGAGCCATTATTGTTGAGAAATGATAT 57.642 29.630 0.00 0.00 32.29 1.63
2178 8650 9.671279 TGTTGAGAAATGATATTATCACACACT 57.329 29.630 8.51 6.41 43.01 3.55
2181 8653 9.889128 TGAGAAATGATATTATCACACACTTGA 57.111 29.630 8.51 0.00 43.01 3.02
2187 8659 8.893219 TGATATTATCACACACTTGAGATTCC 57.107 34.615 2.14 0.00 35.06 3.01
2188 8660 8.708378 TGATATTATCACACACTTGAGATTCCT 58.292 33.333 2.14 0.00 35.06 3.36
2189 8661 8.899427 ATATTATCACACACTTGAGATTCCTG 57.101 34.615 0.00 0.00 35.06 3.86
2190 8662 2.771089 TCACACACTTGAGATTCCTGC 58.229 47.619 0.00 0.00 0.00 4.85
2191 8663 2.369860 TCACACACTTGAGATTCCTGCT 59.630 45.455 0.00 0.00 0.00 4.24
2192 8664 3.578282 TCACACACTTGAGATTCCTGCTA 59.422 43.478 0.00 0.00 0.00 3.49
2193 8665 3.681897 CACACACTTGAGATTCCTGCTAC 59.318 47.826 0.00 0.00 0.00 3.58
2194 8666 3.324846 ACACACTTGAGATTCCTGCTACA 59.675 43.478 0.00 0.00 0.00 2.74
2195 8667 4.019860 ACACACTTGAGATTCCTGCTACAT 60.020 41.667 0.00 0.00 0.00 2.29
2196 8668 4.940046 CACACTTGAGATTCCTGCTACATT 59.060 41.667 0.00 0.00 0.00 2.71
2197 8669 5.413833 CACACTTGAGATTCCTGCTACATTT 59.586 40.000 0.00 0.00 0.00 2.32
2198 8670 6.006449 ACACTTGAGATTCCTGCTACATTTT 58.994 36.000 0.00 0.00 0.00 1.82
2199 8671 6.072286 ACACTTGAGATTCCTGCTACATTTTG 60.072 38.462 0.00 0.00 0.00 2.44
2200 8672 6.006449 ACTTGAGATTCCTGCTACATTTTGT 58.994 36.000 0.00 0.00 0.00 2.83
2201 8673 6.491403 ACTTGAGATTCCTGCTACATTTTGTT 59.509 34.615 0.00 0.00 0.00 2.83
2202 8674 6.258230 TGAGATTCCTGCTACATTTTGTTG 57.742 37.500 0.00 0.00 0.00 3.33
2203 8675 5.769662 TGAGATTCCTGCTACATTTTGTTGT 59.230 36.000 0.00 0.00 0.00 3.32
2204 8676 6.265196 TGAGATTCCTGCTACATTTTGTTGTT 59.735 34.615 0.00 0.00 0.00 2.83
2205 8677 7.054491 AGATTCCTGCTACATTTTGTTGTTT 57.946 32.000 0.00 0.00 0.00 2.83
2206 8678 6.925165 AGATTCCTGCTACATTTTGTTGTTTG 59.075 34.615 0.00 0.00 0.00 2.93
2207 8679 4.942852 TCCTGCTACATTTTGTTGTTTGG 58.057 39.130 0.00 0.00 0.00 3.28
2208 8680 4.057432 CCTGCTACATTTTGTTGTTTGGG 58.943 43.478 0.00 0.00 0.00 4.12
2209 8681 3.462021 TGCTACATTTTGTTGTTTGGGC 58.538 40.909 0.00 0.00 0.00 5.36
2210 8682 3.118629 TGCTACATTTTGTTGTTTGGGCA 60.119 39.130 0.00 0.00 0.00 5.36
2211 8683 3.873952 GCTACATTTTGTTGTTTGGGCAA 59.126 39.130 0.00 0.00 0.00 4.52
2212 8684 4.333926 GCTACATTTTGTTGTTTGGGCAAA 59.666 37.500 0.00 0.00 0.00 3.68
2213 8685 4.961435 ACATTTTGTTGTTTGGGCAAAG 57.039 36.364 0.00 0.00 34.25 2.77
2214 8686 4.331108 ACATTTTGTTGTTTGGGCAAAGT 58.669 34.783 0.00 0.00 34.25 2.66
2215 8687 4.764308 ACATTTTGTTGTTTGGGCAAAGTT 59.236 33.333 0.00 0.00 34.25 2.66
2216 8688 5.242615 ACATTTTGTTGTTTGGGCAAAGTTT 59.757 32.000 0.00 0.00 34.25 2.66
2217 8689 4.756084 TTTGTTGTTTGGGCAAAGTTTG 57.244 36.364 11.41 11.41 0.00 2.93
2218 8690 3.409026 TGTTGTTTGGGCAAAGTTTGT 57.591 38.095 16.70 0.00 0.00 2.83
2219 8691 3.330267 TGTTGTTTGGGCAAAGTTTGTC 58.670 40.909 16.70 14.42 33.62 3.18
2220 8692 3.007398 TGTTGTTTGGGCAAAGTTTGTCT 59.993 39.130 19.07 0.00 35.12 3.41
2221 8693 3.971245 TGTTTGGGCAAAGTTTGTCTT 57.029 38.095 19.07 0.00 38.10 3.01
2222 8694 5.172205 GTTGTTTGGGCAAAGTTTGTCTTA 58.828 37.500 19.07 6.85 35.02 2.10
2223 8695 5.606348 TGTTTGGGCAAAGTTTGTCTTAT 57.394 34.783 19.07 0.00 35.02 1.73
2224 8696 5.983540 TGTTTGGGCAAAGTTTGTCTTATT 58.016 33.333 19.07 0.00 35.02 1.40
2225 8697 6.410540 TGTTTGGGCAAAGTTTGTCTTATTT 58.589 32.000 19.07 0.00 35.02 1.40
2226 8698 6.536941 TGTTTGGGCAAAGTTTGTCTTATTTC 59.463 34.615 19.07 2.87 35.02 2.17
2227 8699 5.860941 TGGGCAAAGTTTGTCTTATTTCA 57.139 34.783 19.07 5.44 35.02 2.69
2228 8700 5.841810 TGGGCAAAGTTTGTCTTATTTCAG 58.158 37.500 19.07 0.00 35.02 3.02
2229 8701 5.596361 TGGGCAAAGTTTGTCTTATTTCAGA 59.404 36.000 19.07 0.00 35.02 3.27
2230 8702 6.152379 GGGCAAAGTTTGTCTTATTTCAGAG 58.848 40.000 19.07 0.00 35.02 3.35
2231 8703 6.239036 GGGCAAAGTTTGTCTTATTTCAGAGT 60.239 38.462 19.07 0.00 35.02 3.24
2232 8704 7.040686 GGGCAAAGTTTGTCTTATTTCAGAGTA 60.041 37.037 19.07 0.00 35.02 2.59
2233 8705 8.515414 GGCAAAGTTTGTCTTATTTCAGAGTAT 58.485 33.333 16.70 0.00 35.02 2.12
2234 8706 9.899226 GCAAAGTTTGTCTTATTTCAGAGTATT 57.101 29.630 16.70 0.00 35.02 1.89
2238 8710 9.924650 AGTTTGTCTTATTTCAGAGTATTACGT 57.075 29.630 0.00 0.00 0.00 3.57
2253 8725 9.811995 AGAGTATTACGTAATGTTTTATCAGCA 57.188 29.630 27.15 3.30 0.00 4.41
2254 8726 9.845305 GAGTATTACGTAATGTTTTATCAGCAC 57.155 33.333 27.15 14.19 0.00 4.40
2255 8727 9.595823 AGTATTACGTAATGTTTTATCAGCACT 57.404 29.630 27.15 15.94 0.00 4.40
2256 8728 9.632969 GTATTACGTAATGTTTTATCAGCACTG 57.367 33.333 27.15 0.00 0.00 3.66
2257 8729 4.969816 ACGTAATGTTTTATCAGCACTGC 58.030 39.130 0.00 0.00 0.00 4.40
2258 8730 4.695455 ACGTAATGTTTTATCAGCACTGCT 59.305 37.500 0.00 0.00 40.77 4.24
2259 8731 5.872617 ACGTAATGTTTTATCAGCACTGCTA 59.127 36.000 2.39 0.00 36.40 3.49
2260 8732 6.538742 ACGTAATGTTTTATCAGCACTGCTAT 59.461 34.615 2.39 1.26 36.40 2.97
2261 8733 7.709182 ACGTAATGTTTTATCAGCACTGCTATA 59.291 33.333 2.39 0.34 36.40 1.31
2262 8734 8.004344 CGTAATGTTTTATCAGCACTGCTATAC 58.996 37.037 2.39 0.00 36.40 1.47
2263 8735 7.864108 AATGTTTTATCAGCACTGCTATACA 57.136 32.000 2.39 0.54 36.40 2.29
2264 8736 6.662414 TGTTTTATCAGCACTGCTATACAC 57.338 37.500 2.39 0.00 36.40 2.90
2265 8737 6.169800 TGTTTTATCAGCACTGCTATACACA 58.830 36.000 2.39 0.07 36.40 3.72
2266 8738 6.092122 TGTTTTATCAGCACTGCTATACACAC 59.908 38.462 2.39 0.00 36.40 3.82
2267 8739 2.278026 TCAGCACTGCTATACACACG 57.722 50.000 2.39 0.00 36.40 4.49
2268 8740 1.816224 TCAGCACTGCTATACACACGA 59.184 47.619 2.39 0.00 36.40 4.35
2269 8741 2.427095 TCAGCACTGCTATACACACGAT 59.573 45.455 2.39 0.00 36.40 3.73
2270 8742 2.537214 CAGCACTGCTATACACACGATG 59.463 50.000 2.39 0.00 36.40 3.84
2271 8743 2.166459 AGCACTGCTATACACACGATGT 59.834 45.455 0.21 0.00 40.63 3.06
2272 8744 2.535984 GCACTGCTATACACACGATGTC 59.464 50.000 0.34 0.00 42.09 3.06
2273 8745 3.116300 CACTGCTATACACACGATGTCC 58.884 50.000 0.34 0.00 42.09 4.02
2274 8746 3.024547 ACTGCTATACACACGATGTCCT 58.975 45.455 0.34 0.00 42.09 3.85
2275 8747 3.066900 ACTGCTATACACACGATGTCCTC 59.933 47.826 0.34 0.00 42.09 3.71
2276 8748 3.288092 TGCTATACACACGATGTCCTCT 58.712 45.455 0.34 0.00 42.09 3.69
2277 8749 3.066760 TGCTATACACACGATGTCCTCTG 59.933 47.826 0.34 0.00 42.09 3.35
2278 8750 3.551046 GCTATACACACGATGTCCTCTGG 60.551 52.174 0.34 0.00 42.09 3.86
2279 8751 0.530744 TACACACGATGTCCTCTGGC 59.469 55.000 0.34 0.00 42.09 4.85
2280 8752 1.448540 CACACGATGTCCTCTGGCC 60.449 63.158 0.00 0.00 0.00 5.36
2281 8753 2.202797 CACGATGTCCTCTGGCCG 60.203 66.667 0.00 0.00 0.00 6.13
2282 8754 2.362503 ACGATGTCCTCTGGCCGA 60.363 61.111 0.00 0.00 0.00 5.54
2283 8755 1.758514 ACGATGTCCTCTGGCCGAT 60.759 57.895 0.00 0.00 0.00 4.18
2284 8756 1.330655 ACGATGTCCTCTGGCCGATT 61.331 55.000 0.00 0.00 0.00 3.34
2285 8757 0.179073 CGATGTCCTCTGGCCGATTT 60.179 55.000 0.00 0.00 0.00 2.17
2286 8758 1.068588 CGATGTCCTCTGGCCGATTTA 59.931 52.381 0.00 0.00 0.00 1.40
2287 8759 2.289072 CGATGTCCTCTGGCCGATTTAT 60.289 50.000 0.00 0.00 0.00 1.40
2288 8760 2.620251 TGTCCTCTGGCCGATTTATG 57.380 50.000 0.00 0.00 0.00 1.90
2289 8761 1.230324 GTCCTCTGGCCGATTTATGC 58.770 55.000 0.00 0.00 0.00 3.14
2290 8762 0.836606 TCCTCTGGCCGATTTATGCA 59.163 50.000 0.00 0.00 0.00 3.96
2291 8763 0.947244 CCTCTGGCCGATTTATGCAC 59.053 55.000 0.00 0.00 0.00 4.57
2292 8764 0.583438 CTCTGGCCGATTTATGCACG 59.417 55.000 0.00 0.00 0.00 5.34
2293 8765 0.176910 TCTGGCCGATTTATGCACGA 59.823 50.000 0.00 0.00 0.00 4.35
2294 8766 1.202639 TCTGGCCGATTTATGCACGAT 60.203 47.619 0.00 0.00 0.00 3.73
2295 8767 0.943673 TGGCCGATTTATGCACGATG 59.056 50.000 0.00 0.00 0.00 3.84
2296 8768 0.944386 GGCCGATTTATGCACGATGT 59.056 50.000 0.00 0.00 0.00 3.06
2297 8769 1.333619 GGCCGATTTATGCACGATGTT 59.666 47.619 0.00 0.00 0.00 2.71
2298 8770 2.375110 GCCGATTTATGCACGATGTTG 58.625 47.619 0.00 0.00 0.00 3.33
2299 8771 2.223249 GCCGATTTATGCACGATGTTGT 60.223 45.455 0.00 0.00 0.00 3.32
2300 8772 3.730662 GCCGATTTATGCACGATGTTGTT 60.731 43.478 0.00 0.00 0.00 2.83
2301 8773 4.495019 GCCGATTTATGCACGATGTTGTTA 60.495 41.667 0.00 0.00 0.00 2.41
2302 8774 5.564768 CCGATTTATGCACGATGTTGTTAA 58.435 37.500 0.00 0.00 0.00 2.01
2303 8775 6.198687 CCGATTTATGCACGATGTTGTTAAT 58.801 36.000 0.00 0.00 0.00 1.40
2304 8776 6.356977 CCGATTTATGCACGATGTTGTTAATC 59.643 38.462 0.00 0.00 0.00 1.75
2305 8777 6.904543 CGATTTATGCACGATGTTGTTAATCA 59.095 34.615 0.00 0.00 0.00 2.57
2306 8778 7.427895 CGATTTATGCACGATGTTGTTAATCAA 59.572 33.333 0.00 0.00 0.00 2.57
2307 8779 8.619146 ATTTATGCACGATGTTGTTAATCAAG 57.381 30.769 0.00 0.00 36.66 3.02
2308 8780 3.820689 TGCACGATGTTGTTAATCAAGC 58.179 40.909 0.00 0.00 36.66 4.01
2309 8781 3.501828 TGCACGATGTTGTTAATCAAGCT 59.498 39.130 0.00 0.00 36.66 3.74
2310 8782 3.848019 GCACGATGTTGTTAATCAAGCTG 59.152 43.478 0.00 0.00 36.66 4.24
2311 8783 4.613622 GCACGATGTTGTTAATCAAGCTGT 60.614 41.667 0.00 0.00 36.66 4.40
2312 8784 5.451908 CACGATGTTGTTAATCAAGCTGTT 58.548 37.500 0.00 0.00 36.66 3.16
2313 8785 5.340403 CACGATGTTGTTAATCAAGCTGTTG 59.660 40.000 0.00 0.00 36.66 3.33
2314 8786 4.853196 CGATGTTGTTAATCAAGCTGTTGG 59.147 41.667 0.00 0.00 36.66 3.77
2315 8787 5.562696 CGATGTTGTTAATCAAGCTGTTGGT 60.563 40.000 0.00 0.00 36.66 3.67
2316 8788 4.930963 TGTTGTTAATCAAGCTGTTGGTG 58.069 39.130 0.00 0.00 36.66 4.17
2317 8789 4.400884 TGTTGTTAATCAAGCTGTTGGTGT 59.599 37.500 0.00 0.00 36.66 4.16
2318 8790 5.105554 TGTTGTTAATCAAGCTGTTGGTGTT 60.106 36.000 0.00 0.00 36.66 3.32
2319 8791 6.095580 TGTTGTTAATCAAGCTGTTGGTGTTA 59.904 34.615 0.00 0.00 36.66 2.41
2320 8792 6.312399 TGTTAATCAAGCTGTTGGTGTTAG 57.688 37.500 0.00 0.00 34.09 2.34
2321 8793 5.240623 TGTTAATCAAGCTGTTGGTGTTAGG 59.759 40.000 0.00 0.00 34.09 2.69
2322 8794 3.788227 ATCAAGCTGTTGGTGTTAGGA 57.212 42.857 0.00 0.00 34.09 2.94
2323 8795 3.569194 TCAAGCTGTTGGTGTTAGGAA 57.431 42.857 0.00 0.00 34.09 3.36
2324 8796 3.476552 TCAAGCTGTTGGTGTTAGGAAG 58.523 45.455 0.00 0.00 34.09 3.46
2325 8797 1.897560 AGCTGTTGGTGTTAGGAAGC 58.102 50.000 0.00 0.00 0.00 3.86
2326 8798 1.142870 AGCTGTTGGTGTTAGGAAGCA 59.857 47.619 0.00 0.00 0.00 3.91
2327 8799 1.537202 GCTGTTGGTGTTAGGAAGCAG 59.463 52.381 0.00 0.00 0.00 4.24
2328 8800 1.537202 CTGTTGGTGTTAGGAAGCAGC 59.463 52.381 0.00 0.00 0.00 5.25
2329 8801 1.133945 TGTTGGTGTTAGGAAGCAGCA 60.134 47.619 0.00 0.00 40.69 4.41
2330 8802 2.162681 GTTGGTGTTAGGAAGCAGCAT 58.837 47.619 0.00 0.00 41.74 3.79
2331 8803 2.113860 TGGTGTTAGGAAGCAGCATC 57.886 50.000 0.00 0.00 38.05 3.91
2332 8804 1.340017 TGGTGTTAGGAAGCAGCATCC 60.340 52.381 8.76 8.76 38.05 3.51
2333 8805 1.340017 GGTGTTAGGAAGCAGCATCCA 60.340 52.381 18.86 2.33 39.55 3.41
2334 8806 1.740025 GTGTTAGGAAGCAGCATCCAC 59.260 52.381 18.86 9.51 39.55 4.02
2335 8807 1.350684 TGTTAGGAAGCAGCATCCACA 59.649 47.619 18.86 11.97 39.55 4.17
2336 8808 2.224744 TGTTAGGAAGCAGCATCCACAA 60.225 45.455 18.86 9.21 39.55 3.33
2337 8809 2.113860 TAGGAAGCAGCATCCACAAC 57.886 50.000 18.86 0.00 39.55 3.32
2338 8810 0.111061 AGGAAGCAGCATCCACAACA 59.889 50.000 18.86 0.00 39.55 3.33
2339 8811 1.180029 GGAAGCAGCATCCACAACAT 58.820 50.000 11.99 0.00 36.92 2.71
2340 8812 1.133790 GGAAGCAGCATCCACAACATC 59.866 52.381 11.99 0.00 36.92 3.06
2341 8813 1.814394 GAAGCAGCATCCACAACATCA 59.186 47.619 0.00 0.00 0.00 3.07
2342 8814 2.139323 AGCAGCATCCACAACATCAT 57.861 45.000 0.00 0.00 0.00 2.45
2343 8815 2.022195 AGCAGCATCCACAACATCATC 58.978 47.619 0.00 0.00 0.00 2.92
2344 8816 1.066605 GCAGCATCCACAACATCATCC 59.933 52.381 0.00 0.00 0.00 3.51
2345 8817 1.332686 CAGCATCCACAACATCATCCG 59.667 52.381 0.00 0.00 0.00 4.18
2346 8818 1.210234 AGCATCCACAACATCATCCGA 59.790 47.619 0.00 0.00 0.00 4.55
2347 8819 2.158711 AGCATCCACAACATCATCCGAT 60.159 45.455 0.00 0.00 0.00 4.18
2348 8820 2.225019 GCATCCACAACATCATCCGATC 59.775 50.000 0.00 0.00 0.00 3.69
2349 8821 2.620251 TCCACAACATCATCCGATCC 57.380 50.000 0.00 0.00 0.00 3.36
2350 8822 1.202521 TCCACAACATCATCCGATCCG 60.203 52.381 0.00 0.00 0.00 4.18
2351 8823 1.202521 CCACAACATCATCCGATCCGA 60.203 52.381 0.00 0.00 0.00 4.55
2352 8824 2.548707 CCACAACATCATCCGATCCGAT 60.549 50.000 0.00 0.00 0.00 4.18
2353 8825 3.133691 CACAACATCATCCGATCCGATT 58.866 45.455 0.00 0.00 0.00 3.34
2354 8826 4.306600 CACAACATCATCCGATCCGATTA 58.693 43.478 0.00 0.00 0.00 1.75
2355 8827 4.931601 CACAACATCATCCGATCCGATTAT 59.068 41.667 0.00 0.00 0.00 1.28
2356 8828 4.931601 ACAACATCATCCGATCCGATTATG 59.068 41.667 13.43 13.43 32.46 1.90
2357 8829 3.525537 ACATCATCCGATCCGATTATGC 58.474 45.455 14.41 0.00 30.26 3.14
2358 8830 3.055891 ACATCATCCGATCCGATTATGCA 60.056 43.478 14.41 0.00 30.26 3.96
2359 8831 3.893326 TCATCCGATCCGATTATGCAT 57.107 42.857 3.79 3.79 0.00 3.96
2360 8832 3.785486 TCATCCGATCCGATTATGCATC 58.215 45.455 0.19 0.00 0.00 3.91
2373 8845 4.365287 GCATCGTGCACAAATCGG 57.635 55.556 18.64 0.00 44.26 4.18
2374 8846 1.501741 GCATCGTGCACAAATCGGT 59.498 52.632 18.64 0.00 44.26 4.69
2375 8847 0.521242 GCATCGTGCACAAATCGGTC 60.521 55.000 18.64 0.00 44.26 4.79
2376 8848 0.795698 CATCGTGCACAAATCGGTCA 59.204 50.000 18.64 0.00 0.00 4.02
2377 8849 1.398041 CATCGTGCACAAATCGGTCAT 59.602 47.619 18.64 0.00 0.00 3.06
2378 8850 0.795698 TCGTGCACAAATCGGTCATG 59.204 50.000 18.64 0.00 0.00 3.07
2379 8851 0.794229 CGTGCACAAATCGGTCATGC 60.794 55.000 18.64 0.00 36.81 4.06
2380 8852 0.240678 GTGCACAAATCGGTCATGCA 59.759 50.000 13.17 0.00 43.70 3.96
2381 8853 0.240678 TGCACAAATCGGTCATGCAC 59.759 50.000 0.00 0.00 41.18 4.57
2382 8854 0.794229 GCACAAATCGGTCATGCACG 60.794 55.000 0.00 2.93 36.30 5.34
2383 8855 0.516877 CACAAATCGGTCATGCACGT 59.483 50.000 8.37 0.00 0.00 4.49
2384 8856 0.516877 ACAAATCGGTCATGCACGTG 59.483 50.000 12.28 12.28 0.00 4.49
2385 8857 0.179192 CAAATCGGTCATGCACGTGG 60.179 55.000 18.88 0.08 0.00 4.94
2386 8858 0.605319 AAATCGGTCATGCACGTGGT 60.605 50.000 18.88 0.00 0.00 4.16
2387 8859 1.298157 AATCGGTCATGCACGTGGTG 61.298 55.000 18.88 0.00 36.51 4.17
2398 8870 1.295792 CACGTGGTGCACAAAGTAGT 58.704 50.000 20.43 6.50 33.40 2.73
2399 8871 1.668751 CACGTGGTGCACAAAGTAGTT 59.331 47.619 20.43 0.00 33.40 2.24
2400 8872 2.096819 CACGTGGTGCACAAAGTAGTTT 59.903 45.455 20.43 0.00 33.40 2.66
2401 8873 2.353579 ACGTGGTGCACAAAGTAGTTTC 59.646 45.455 20.43 0.00 33.40 2.78
2402 8874 2.598907 CGTGGTGCACAAAGTAGTTTCG 60.599 50.000 20.43 0.18 33.40 3.46
2403 8875 2.610374 GTGGTGCACAAAGTAGTTTCGA 59.390 45.455 20.43 0.00 34.08 3.71
2404 8876 3.250040 GTGGTGCACAAAGTAGTTTCGAT 59.750 43.478 20.43 0.00 34.08 3.59
2405 8877 3.249799 TGGTGCACAAAGTAGTTTCGATG 59.750 43.478 20.43 0.00 0.00 3.84
2406 8878 3.250040 GGTGCACAAAGTAGTTTCGATGT 59.750 43.478 20.43 0.00 0.00 3.06
2407 8879 4.261031 GGTGCACAAAGTAGTTTCGATGTT 60.261 41.667 20.43 0.00 0.00 2.71
2408 8880 5.270853 GTGCACAAAGTAGTTTCGATGTTT 58.729 37.500 13.17 0.00 0.00 2.83
2409 8881 5.741982 GTGCACAAAGTAGTTTCGATGTTTT 59.258 36.000 13.17 0.00 0.00 2.43
2410 8882 5.741510 TGCACAAAGTAGTTTCGATGTTTTG 59.258 36.000 0.00 0.00 0.00 2.44
2411 8883 5.968848 GCACAAAGTAGTTTCGATGTTTTGA 59.031 36.000 0.00 0.00 0.00 2.69
2412 8884 6.636850 GCACAAAGTAGTTTCGATGTTTTGAT 59.363 34.615 0.00 0.00 0.00 2.57
2413 8885 7.167468 GCACAAAGTAGTTTCGATGTTTTGATT 59.833 33.333 0.00 0.00 0.00 2.57
2414 8886 9.658475 CACAAAGTAGTTTCGATGTTTTGATTA 57.342 29.630 0.00 0.00 0.00 1.75
2509 11412 2.890311 CACTTCCCATTACTGTTGCCAA 59.110 45.455 0.00 0.00 0.00 4.52
2532 11435 0.184692 TGGTGTTTCATGACCTGGCA 59.815 50.000 0.00 0.00 32.98 4.92
2620 11523 6.263168 ACATCTTAAAGTTGACCCAGTTTCTG 59.737 38.462 0.00 0.00 0.00 3.02
2702 11605 4.823989 GGATACATTGAATGGGAGACTTGG 59.176 45.833 10.27 0.00 33.60 3.61
2704 11607 4.387026 ACATTGAATGGGAGACTTGGAA 57.613 40.909 10.27 0.00 33.60 3.53
2705 11608 4.338879 ACATTGAATGGGAGACTTGGAAG 58.661 43.478 10.27 0.00 33.60 3.46
2706 11609 4.202609 ACATTGAATGGGAGACTTGGAAGT 60.203 41.667 10.27 0.00 36.87 3.01
2707 11610 3.423539 TGAATGGGAGACTTGGAAGTG 57.576 47.619 0.00 0.00 39.88 3.16
2708 11611 2.978978 TGAATGGGAGACTTGGAAGTGA 59.021 45.455 0.00 0.00 39.88 3.41
2714 11617 2.879026 GGAGACTTGGAAGTGAAACCAC 59.121 50.000 0.00 0.00 39.88 4.16
2721 11624 2.113131 GAAGTGAAACCACGGCACCG 62.113 60.000 7.71 7.71 41.55 4.94
2722 11625 2.589442 GTGAAACCACGGCACCGA 60.589 61.111 17.40 0.00 42.83 4.69
2726 11629 1.635663 GAAACCACGGCACCGATGAG 61.636 60.000 17.40 3.63 42.83 2.90
2827 11730 6.764379 TGTGTCAGGACAAGATAATAACACA 58.236 36.000 3.28 0.00 43.77 3.72
2832 11735 9.378551 GTCAGGACAAGATAATAACACACATAA 57.621 33.333 0.00 0.00 0.00 1.90
2833 11736 9.952030 TCAGGACAAGATAATAACACACATAAA 57.048 29.630 0.00 0.00 0.00 1.40
2865 11768 9.833182 GGACTTCTTTTAGCTAATTTCTCTTTG 57.167 33.333 7.08 0.00 0.00 2.77
2868 11771 9.339492 CTTCTTTTAGCTAATTTCTCTTTGCAG 57.661 33.333 7.08 0.00 30.65 4.41
2890 11793 0.973632 ACCACTTCGTCATGGCAGTA 59.026 50.000 0.00 0.00 39.84 2.74
2891 11794 1.337823 ACCACTTCGTCATGGCAGTAC 60.338 52.381 0.00 0.00 39.84 2.73
2892 11795 1.066858 CCACTTCGTCATGGCAGTACT 60.067 52.381 0.00 0.00 0.00 2.73
2894 11797 3.368013 CCACTTCGTCATGGCAGTACTAA 60.368 47.826 0.00 0.00 0.00 2.24
2895 11798 4.433615 CACTTCGTCATGGCAGTACTAAT 58.566 43.478 0.00 0.00 0.00 1.73
2896 11799 4.870426 CACTTCGTCATGGCAGTACTAATT 59.130 41.667 0.00 0.00 0.00 1.40
2897 11800 6.040247 CACTTCGTCATGGCAGTACTAATTA 58.960 40.000 0.00 0.00 0.00 1.40
2898 11801 6.199154 CACTTCGTCATGGCAGTACTAATTAG 59.801 42.308 11.05 11.05 0.00 1.73
2900 11803 4.341235 TCGTCATGGCAGTACTAATTAGCT 59.659 41.667 12.54 0.00 0.00 3.32
2903 11806 5.235186 GTCATGGCAGTACTAATTAGCTGTG 59.765 44.000 12.54 8.05 0.00 3.66
2930 11843 4.827284 TGATGCATGCTGCTACTACTACTA 59.173 41.667 20.33 0.00 45.31 1.82
2931 11844 4.569761 TGCATGCTGCTACTACTACTAC 57.430 45.455 20.33 0.00 45.31 2.73
2932 11845 4.207955 TGCATGCTGCTACTACTACTACT 58.792 43.478 20.33 0.00 45.31 2.57
2933 11846 5.374071 TGCATGCTGCTACTACTACTACTA 58.626 41.667 20.33 0.00 45.31 1.82
2949 11862 8.186709 ACTACTACTACCTTTTAGCAACTTCA 57.813 34.615 0.00 0.00 0.00 3.02
2953 11866 6.176014 ACTACCTTTTAGCAACTTCAGTCT 57.824 37.500 0.00 0.00 0.00 3.24
2963 11876 3.059325 GCAACTTCAGTCTTAGCTGTGTG 60.059 47.826 0.00 0.00 37.70 3.82
2966 11879 3.243907 ACTTCAGTCTTAGCTGTGTGGAC 60.244 47.826 0.00 0.00 37.70 4.02
2967 11880 2.598565 TCAGTCTTAGCTGTGTGGACT 58.401 47.619 0.00 0.00 37.69 3.85
2968 11881 2.681706 CAGTCTTAGCTGTGTGGACTG 58.318 52.381 15.97 15.97 44.66 3.51
2969 11882 2.036475 CAGTCTTAGCTGTGTGGACTGT 59.964 50.000 18.93 0.00 44.84 3.55
2970 11883 2.036475 AGTCTTAGCTGTGTGGACTGTG 59.964 50.000 0.00 0.00 36.15 3.66
2971 11884 1.344438 TCTTAGCTGTGTGGACTGTGG 59.656 52.381 0.00 0.00 0.00 4.17
2972 11885 1.344438 CTTAGCTGTGTGGACTGTGGA 59.656 52.381 0.00 0.00 0.00 4.02
2973 11886 0.969149 TAGCTGTGTGGACTGTGGAG 59.031 55.000 0.00 0.00 0.00 3.86
2974 11887 0.760567 AGCTGTGTGGACTGTGGAGA 60.761 55.000 0.00 0.00 0.00 3.71
2975 11888 0.601311 GCTGTGTGGACTGTGGAGAC 60.601 60.000 0.00 0.00 0.00 3.36
3011 11924 1.864263 TTCAGGAGAGGGAGCGAGGA 61.864 60.000 0.00 0.00 0.00 3.71
3025 11938 0.597568 CGAGGAAAACAGCCAATGCA 59.402 50.000 0.00 0.00 41.13 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.553466 CCATCACGGTCCCCAGTAAAAA 60.553 50.000 0.00 0.00 0.00 1.94
47 48 0.536460 AAACACCACCCATCACGGTC 60.536 55.000 0.00 0.00 32.17 4.79
48 49 0.106419 AAAACACCACCCATCACGGT 60.106 50.000 0.00 0.00 36.18 4.83
59 60 1.025812 CCGGTTGTAGCAAAACACCA 58.974 50.000 0.00 0.00 0.00 4.17
90 91 2.954753 GCAGGTGTCGGTTCAAGCG 61.955 63.158 1.56 1.56 40.97 4.68
91 92 1.845809 CTGCAGGTGTCGGTTCAAGC 61.846 60.000 5.57 0.00 0.00 4.01
96 97 0.108585 AACATCTGCAGGTGTCGGTT 59.891 50.000 31.89 14.60 0.00 4.44
114 115 1.211212 CATGCCCTCTGTCATCTCCAA 59.789 52.381 0.00 0.00 0.00 3.53
118 119 0.326904 TCCCATGCCCTCTGTCATCT 60.327 55.000 0.00 0.00 0.00 2.90
197 198 4.508861 ACAACTCATTGCATGAACAAAAGC 59.491 37.500 0.00 0.00 39.66 3.51
208 209 1.039068 CCCCAACACAACTCATTGCA 58.961 50.000 0.00 0.00 39.66 4.08
281 282 1.402613 TCGGATCGCATGTCTACGAAA 59.597 47.619 0.00 0.00 42.31 3.46
285 286 4.987832 AGAATATCGGATCGCATGTCTAC 58.012 43.478 0.00 0.00 0.00 2.59
288 289 3.181526 GCAAGAATATCGGATCGCATGTC 60.182 47.826 0.00 0.00 0.00 3.06
295 296 2.953020 AGCGAGCAAGAATATCGGATC 58.047 47.619 0.00 0.00 36.96 3.36
298 299 2.033407 CACAAGCGAGCAAGAATATCGG 60.033 50.000 0.00 0.00 36.96 4.18
300 301 2.286654 GGCACAAGCGAGCAAGAATATC 60.287 50.000 0.00 0.00 43.41 1.63
303 304 0.890542 TGGCACAAGCGAGCAAGAAT 60.891 50.000 0.00 0.00 43.41 2.40
338 339 3.181451 ACGTGATGTCCGAGGTAGGTATA 60.181 47.826 0.00 0.00 0.00 1.47
339 340 2.228059 CGTGATGTCCGAGGTAGGTAT 58.772 52.381 0.00 0.00 0.00 2.73
341 342 0.323178 ACGTGATGTCCGAGGTAGGT 60.323 55.000 0.00 0.00 0.00 3.08
355 621 1.340697 TGGAGCTAGCCTTAGACGTGA 60.341 52.381 12.13 0.00 0.00 4.35
358 624 0.386113 GGTGGAGCTAGCCTTAGACG 59.614 60.000 12.13 0.00 0.00 4.18
376 642 1.192436 GCGTCGATGAGTACGTTCGG 61.192 60.000 9.31 0.00 41.10 4.30
379 645 0.519999 GTCGCGTCGATGAGTACGTT 60.520 55.000 9.31 0.00 41.10 3.99
380 646 1.059994 GTCGCGTCGATGAGTACGT 59.940 57.895 9.31 0.00 41.10 3.57
381 647 0.519792 TTGTCGCGTCGATGAGTACG 60.520 55.000 9.31 2.21 38.42 3.67
382 648 1.181001 CTTGTCGCGTCGATGAGTAC 58.819 55.000 9.31 6.43 38.42 2.73
383 649 0.522705 GCTTGTCGCGTCGATGAGTA 60.523 55.000 9.31 0.00 38.42 2.59
384 650 1.801913 GCTTGTCGCGTCGATGAGT 60.802 57.895 9.31 0.00 38.42 3.41
385 651 1.801512 TGCTTGTCGCGTCGATGAG 60.802 57.895 9.31 5.22 43.27 2.90
386 652 2.086426 GTGCTTGTCGCGTCGATGA 61.086 57.895 9.31 0.00 43.27 2.92
387 653 2.391821 GTGCTTGTCGCGTCGATG 59.608 61.111 5.77 0.00 43.27 3.84
388 654 2.809601 GGTGCTTGTCGCGTCGAT 60.810 61.111 5.77 0.00 43.27 3.59
399 665 4.778143 CTAAGGCCGGCGGTGCTT 62.778 66.667 28.82 19.80 0.00 3.91
402 668 2.862674 TTAAGCTAAGGCCGGCGGTG 62.863 60.000 28.82 11.60 39.73 4.94
403 669 1.979619 ATTAAGCTAAGGCCGGCGGT 61.980 55.000 28.82 13.46 39.73 5.68
404 670 0.818040 AATTAAGCTAAGGCCGGCGG 60.818 55.000 24.35 24.35 39.73 6.13
405 671 1.873698 TAATTAAGCTAAGGCCGGCG 58.126 50.000 22.54 7.65 39.73 6.46
406 672 4.848562 AATTAATTAAGCTAAGGCCGGC 57.151 40.909 21.18 21.18 39.73 6.13
407 673 6.935208 AGAGTAATTAATTAAGCTAAGGCCGG 59.065 38.462 9.48 0.00 39.73 6.13
408 674 7.117956 GGAGAGTAATTAATTAAGCTAAGGCCG 59.882 40.741 9.48 0.00 39.73 6.13
409 675 8.158132 AGGAGAGTAATTAATTAAGCTAAGGCC 58.842 37.037 9.48 0.00 39.73 5.19
410 676 9.210329 GAGGAGAGTAATTAATTAAGCTAAGGC 57.790 37.037 9.48 0.00 39.06 4.35
411 677 9.413048 CGAGGAGAGTAATTAATTAAGCTAAGG 57.587 37.037 9.48 0.00 0.00 2.69
412 678 8.917655 GCGAGGAGAGTAATTAATTAAGCTAAG 58.082 37.037 9.48 4.51 0.00 2.18
413 679 7.871463 GGCGAGGAGAGTAATTAATTAAGCTAA 59.129 37.037 9.48 0.00 0.00 3.09
414 680 7.376615 GGCGAGGAGAGTAATTAATTAAGCTA 58.623 38.462 9.48 0.00 0.00 3.32
415 681 6.224584 GGCGAGGAGAGTAATTAATTAAGCT 58.775 40.000 9.48 9.55 0.00 3.74
416 682 5.118817 CGGCGAGGAGAGTAATTAATTAAGC 59.881 44.000 9.48 5.21 0.00 3.09
417 683 5.634020 CCGGCGAGGAGAGTAATTAATTAAG 59.366 44.000 9.30 0.00 45.00 1.85
418 684 5.535333 CCGGCGAGGAGAGTAATTAATTAA 58.465 41.667 9.30 0.00 45.00 1.40
419 685 4.560108 GCCGGCGAGGAGAGTAATTAATTA 60.560 45.833 12.58 3.71 45.00 1.40
420 686 3.802675 GCCGGCGAGGAGAGTAATTAATT 60.803 47.826 12.58 5.89 45.00 1.40
421 687 2.288886 GCCGGCGAGGAGAGTAATTAAT 60.289 50.000 12.58 0.00 45.00 1.40
422 688 1.068127 GCCGGCGAGGAGAGTAATTAA 59.932 52.381 12.58 0.00 45.00 1.40
423 689 0.672342 GCCGGCGAGGAGAGTAATTA 59.328 55.000 12.58 0.00 45.00 1.40
424 690 1.442148 GCCGGCGAGGAGAGTAATT 59.558 57.895 12.58 0.00 45.00 1.40
425 691 2.499827 GGCCGGCGAGGAGAGTAAT 61.500 63.158 22.54 0.00 45.00 1.89
426 692 3.145551 GGCCGGCGAGGAGAGTAA 61.146 66.667 22.54 0.00 45.00 2.24
442 708 4.996434 GGATGATGAGCCGGCCGG 62.996 72.222 40.26 40.26 38.57 6.13
448 714 4.527509 TCTTCTTATCGGATGATGAGCC 57.472 45.455 0.00 0.00 37.94 4.70
449 715 5.176590 GTGTTCTTCTTATCGGATGATGAGC 59.823 44.000 0.00 1.82 37.94 4.26
450 716 6.199908 GTGTGTTCTTCTTATCGGATGATGAG 59.800 42.308 0.00 0.00 39.06 2.90
451 717 6.042777 GTGTGTTCTTCTTATCGGATGATGA 58.957 40.000 0.00 0.00 35.99 2.92
452 718 5.051441 CGTGTGTTCTTCTTATCGGATGATG 60.051 44.000 0.00 0.00 35.99 3.07
453 719 5.043903 CGTGTGTTCTTCTTATCGGATGAT 58.956 41.667 0.00 0.00 38.67 2.45
454 720 4.082408 ACGTGTGTTCTTCTTATCGGATGA 60.082 41.667 0.00 0.00 0.00 2.92
455 721 4.174009 ACGTGTGTTCTTCTTATCGGATG 58.826 43.478 0.00 0.00 0.00 3.51
456 722 4.451629 ACGTGTGTTCTTCTTATCGGAT 57.548 40.909 0.00 0.00 0.00 4.18
457 723 3.928727 ACGTGTGTTCTTCTTATCGGA 57.071 42.857 0.00 0.00 0.00 4.55
458 724 3.541130 CGTACGTGTGTTCTTCTTATCGG 59.459 47.826 7.22 0.00 0.00 4.18
459 725 3.002344 GCGTACGTGTGTTCTTCTTATCG 60.002 47.826 17.90 0.00 0.00 2.92
460 726 3.002344 CGCGTACGTGTGTTCTTCTTATC 60.002 47.826 20.36 0.00 33.53 1.75
461 727 2.912967 CGCGTACGTGTGTTCTTCTTAT 59.087 45.455 20.36 0.00 33.53 1.73
462 728 2.309693 CGCGTACGTGTGTTCTTCTTA 58.690 47.619 20.36 0.00 33.53 2.10
463 729 1.126079 CGCGTACGTGTGTTCTTCTT 58.874 50.000 20.36 0.00 33.53 2.52
464 730 1.273455 GCGCGTACGTGTGTTCTTCT 61.273 55.000 27.72 0.00 42.83 2.85
465 731 1.127225 GCGCGTACGTGTGTTCTTC 59.873 57.895 27.72 7.56 42.83 2.87
466 732 2.641783 CGCGCGTACGTGTGTTCTT 61.642 57.895 29.03 0.00 44.66 2.52
467 733 3.095278 CGCGCGTACGTGTGTTCT 61.095 61.111 29.03 0.00 44.66 3.01
476 742 3.530104 CACCTCGAACGCGCGTAC 61.530 66.667 37.93 12.65 37.46 3.67
477 743 4.764336 CCACCTCGAACGCGCGTA 62.764 66.667 37.93 20.50 37.46 4.42
479 745 4.764336 TACCACCTCGAACGCGCG 62.764 66.667 30.96 30.96 37.46 6.86
480 746 3.177249 GTACCACCTCGAACGCGC 61.177 66.667 5.73 0.00 37.46 6.86
481 747 2.239341 TACGTACCACCTCGAACGCG 62.239 60.000 3.53 3.53 38.87 6.01
482 748 0.794605 GTACGTACCACCTCGAACGC 60.795 60.000 15.00 0.00 38.87 4.84
483 749 0.519175 CGTACGTACCACCTCGAACG 60.519 60.000 19.67 2.89 40.99 3.95
484 750 0.517316 ACGTACGTACCACCTCGAAC 59.483 55.000 21.41 0.00 0.00 3.95
485 751 1.730064 GTACGTACGTACCACCTCGAA 59.270 52.381 36.94 11.26 43.60 3.71
486 752 1.355971 GTACGTACGTACCACCTCGA 58.644 55.000 36.94 11.98 43.60 4.04
487 753 3.877801 GTACGTACGTACCACCTCG 57.122 57.895 36.94 9.60 43.60 4.63
495 761 0.672091 TGGTCGCCTGTACGTACGTA 60.672 55.000 23.60 23.60 0.00 3.57
496 762 1.308069 ATGGTCGCCTGTACGTACGT 61.308 55.000 25.98 25.98 0.00 3.57
497 763 0.864377 CATGGTCGCCTGTACGTACG 60.864 60.000 20.18 15.01 0.00 3.67
498 764 0.526954 CCATGGTCGCCTGTACGTAC 60.527 60.000 18.90 18.90 0.00 3.67
499 765 1.811195 CCATGGTCGCCTGTACGTA 59.189 57.895 2.57 0.00 0.00 3.57
500 766 2.577059 CCATGGTCGCCTGTACGT 59.423 61.111 2.57 0.00 0.00 3.57
501 767 2.890474 GCCATGGTCGCCTGTACG 60.890 66.667 14.67 0.00 0.00 3.67
502 768 2.513897 GGCCATGGTCGCCTGTAC 60.514 66.667 14.67 0.00 43.48 2.90
503 769 4.155733 CGGCCATGGTCGCCTGTA 62.156 66.667 28.00 0.00 44.73 2.74
539 805 3.986006 GTGAGTGGTCGACCGGCA 61.986 66.667 28.70 22.16 39.43 5.69
571 6662 0.466555 CTAGTAGGGCTGAGAGCGGT 60.467 60.000 0.00 0.00 43.62 5.68
630 7096 2.808543 GCAATTGGACAAAGACTCGAGT 59.191 45.455 20.18 20.18 0.00 4.18
648 7114 4.576873 TGAAATCAGAAGTACCAAACGCAA 59.423 37.500 0.00 0.00 0.00 4.85
721 7187 1.268352 GCTCATCGTCTAGCCTGGTAG 59.732 57.143 0.00 0.00 32.40 3.18
781 7253 9.943465 GAAAATAATCAAGCTTCACGAATTTTC 57.057 29.630 18.20 18.20 35.15 2.29
814 7286 5.335191 GCAAACAAGAAGGACCAACTAGATG 60.335 44.000 0.00 0.00 0.00 2.90
861 7333 7.489239 AGGTTAGTAGAGCAGAAGAAAGAAT 57.511 36.000 0.00 0.00 0.00 2.40
892 7364 3.064820 GCGACTTTTCCTTCACTGTGAAA 59.935 43.478 22.25 7.67 35.73 2.69
899 7371 2.854805 GCAACAGCGACTTTTCCTTCAC 60.855 50.000 0.00 0.00 0.00 3.18
926 7398 3.374402 CTGAGACGGACGGCCTGT 61.374 66.667 5.33 4.78 0.00 4.00
938 7410 2.441164 GCGAGGGAGAGCCTGAGA 60.441 66.667 0.00 0.00 0.00 3.27
1038 7510 0.389166 CAGCGAAGGCGAGAAAGTCT 60.389 55.000 0.00 0.00 46.35 3.24
1133 7605 2.364632 CATAACGGGCATCAGGTTTGA 58.635 47.619 0.00 0.00 37.81 2.69
1653 8125 3.973973 CAATAACCATGTCCTCTCCCCTA 59.026 47.826 0.00 0.00 0.00 3.53
1661 8133 1.215423 GGAGGCCAATAACCATGTCCT 59.785 52.381 5.01 0.00 0.00 3.85
1996 8468 2.743928 GGCTCTGGTTGTGCTCGG 60.744 66.667 0.00 0.00 35.67 4.63
2041 8513 1.413812 GTTGAAATGGCCATCATCCCC 59.586 52.381 21.08 9.71 34.44 4.81
2042 8514 1.413812 GGTTGAAATGGCCATCATCCC 59.586 52.381 21.08 13.41 34.44 3.85
2043 8515 2.101917 CTGGTTGAAATGGCCATCATCC 59.898 50.000 21.08 21.75 36.42 3.51
2044 8516 3.025978 TCTGGTTGAAATGGCCATCATC 58.974 45.455 21.08 20.21 34.44 2.92
2045 8517 3.028850 CTCTGGTTGAAATGGCCATCAT 58.971 45.455 21.08 11.56 37.79 2.45
2046 8518 2.449464 CTCTGGTTGAAATGGCCATCA 58.551 47.619 21.08 12.43 0.00 3.07
2047 8519 1.135721 GCTCTGGTTGAAATGGCCATC 59.864 52.381 21.08 9.37 0.00 3.51
2048 8520 1.188863 GCTCTGGTTGAAATGGCCAT 58.811 50.000 14.09 14.09 0.00 4.40
2049 8521 0.899717 GGCTCTGGTTGAAATGGCCA 60.900 55.000 8.56 8.56 38.16 5.36
2050 8522 0.899717 TGGCTCTGGTTGAAATGGCC 60.900 55.000 0.00 0.00 38.67 5.36
2051 8523 1.188863 ATGGCTCTGGTTGAAATGGC 58.811 50.000 0.00 0.00 0.00 4.40
2052 8524 3.258872 TGAAATGGCTCTGGTTGAAATGG 59.741 43.478 0.00 0.00 0.00 3.16
2053 8525 4.524316 TGAAATGGCTCTGGTTGAAATG 57.476 40.909 0.00 0.00 0.00 2.32
2054 8526 4.161001 GGATGAAATGGCTCTGGTTGAAAT 59.839 41.667 0.00 0.00 0.00 2.17
2055 8527 3.511146 GGATGAAATGGCTCTGGTTGAAA 59.489 43.478 0.00 0.00 0.00 2.69
2056 8528 3.091545 GGATGAAATGGCTCTGGTTGAA 58.908 45.455 0.00 0.00 0.00 2.69
2057 8529 2.041485 TGGATGAAATGGCTCTGGTTGA 59.959 45.455 0.00 0.00 0.00 3.18
2058 8530 2.449464 TGGATGAAATGGCTCTGGTTG 58.551 47.619 0.00 0.00 0.00 3.77
2059 8531 2.905415 TGGATGAAATGGCTCTGGTT 57.095 45.000 0.00 0.00 0.00 3.67
2060 8532 3.393426 AATGGATGAAATGGCTCTGGT 57.607 42.857 0.00 0.00 0.00 4.00
2061 8533 3.702548 TGAAATGGATGAAATGGCTCTGG 59.297 43.478 0.00 0.00 0.00 3.86
2062 8534 4.994907 TGAAATGGATGAAATGGCTCTG 57.005 40.909 0.00 0.00 0.00 3.35
2063 8535 4.587684 GGATGAAATGGATGAAATGGCTCT 59.412 41.667 0.00 0.00 0.00 4.09
2064 8536 4.342951 TGGATGAAATGGATGAAATGGCTC 59.657 41.667 0.00 0.00 0.00 4.70
2065 8537 4.291792 TGGATGAAATGGATGAAATGGCT 58.708 39.130 0.00 0.00 0.00 4.75
2066 8538 4.100498 ACTGGATGAAATGGATGAAATGGC 59.900 41.667 0.00 0.00 0.00 4.40
2067 8539 5.361571 TGACTGGATGAAATGGATGAAATGG 59.638 40.000 0.00 0.00 0.00 3.16
2068 8540 6.459670 TGACTGGATGAAATGGATGAAATG 57.540 37.500 0.00 0.00 0.00 2.32
2069 8541 6.666546 AGTTGACTGGATGAAATGGATGAAAT 59.333 34.615 0.00 0.00 0.00 2.17
2070 8542 6.012113 AGTTGACTGGATGAAATGGATGAAA 58.988 36.000 0.00 0.00 0.00 2.69
2071 8543 5.416639 CAGTTGACTGGATGAAATGGATGAA 59.583 40.000 3.19 0.00 40.20 2.57
2072 8544 4.945543 CAGTTGACTGGATGAAATGGATGA 59.054 41.667 3.19 0.00 40.20 2.92
2073 8545 5.244785 CAGTTGACTGGATGAAATGGATG 57.755 43.478 3.19 0.00 40.20 3.51
2086 8558 3.369892 CCCATAGGTTCTCCAGTTGACTG 60.370 52.174 4.15 4.15 43.40 3.51
2087 8559 2.840651 CCCATAGGTTCTCCAGTTGACT 59.159 50.000 0.00 0.00 35.89 3.41
2088 8560 3.268023 CCCATAGGTTCTCCAGTTGAC 57.732 52.381 0.00 0.00 35.89 3.18
2111 8583 3.742433 ATCATAAACAGAGCTCGGGAG 57.258 47.619 18.37 7.77 0.00 4.30
2112 8584 4.442706 GAAATCATAAACAGAGCTCGGGA 58.557 43.478 18.37 5.59 0.00 5.14
2113 8585 3.246226 CGAAATCATAAACAGAGCTCGGG 59.754 47.826 18.37 12.40 0.00 5.14
2114 8586 3.246226 CCGAAATCATAAACAGAGCTCGG 59.754 47.826 12.66 12.66 37.07 4.63
2115 8587 4.026475 GTCCGAAATCATAAACAGAGCTCG 60.026 45.833 8.37 6.04 0.00 5.03
2116 8588 4.870426 TGTCCGAAATCATAAACAGAGCTC 59.130 41.667 5.27 5.27 0.00 4.09
2117 8589 4.832248 TGTCCGAAATCATAAACAGAGCT 58.168 39.130 0.00 0.00 0.00 4.09
2118 8590 4.631813 ACTGTCCGAAATCATAAACAGAGC 59.368 41.667 7.27 0.00 37.97 4.09
2119 8591 5.869344 TCACTGTCCGAAATCATAAACAGAG 59.131 40.000 7.27 0.01 37.97 3.35
2120 8592 5.789521 TCACTGTCCGAAATCATAAACAGA 58.210 37.500 7.27 0.00 37.97 3.41
2121 8593 5.446473 GCTCACTGTCCGAAATCATAAACAG 60.446 44.000 0.00 0.00 39.90 3.16
2122 8594 4.391830 GCTCACTGTCCGAAATCATAAACA 59.608 41.667 0.00 0.00 0.00 2.83
2123 8595 4.201822 GGCTCACTGTCCGAAATCATAAAC 60.202 45.833 0.00 0.00 0.00 2.01
2124 8596 3.938963 GGCTCACTGTCCGAAATCATAAA 59.061 43.478 0.00 0.00 0.00 1.40
2125 8597 3.055458 TGGCTCACTGTCCGAAATCATAA 60.055 43.478 0.00 0.00 0.00 1.90
2126 8598 2.499693 TGGCTCACTGTCCGAAATCATA 59.500 45.455 0.00 0.00 0.00 2.15
2127 8599 1.278985 TGGCTCACTGTCCGAAATCAT 59.721 47.619 0.00 0.00 0.00 2.45
2128 8600 0.684535 TGGCTCACTGTCCGAAATCA 59.315 50.000 0.00 0.00 0.00 2.57
2129 8601 2.029838 ATGGCTCACTGTCCGAAATC 57.970 50.000 0.00 0.00 0.00 2.17
2130 8602 2.496899 AATGGCTCACTGTCCGAAAT 57.503 45.000 0.00 0.00 0.00 2.17
2131 8603 3.627395 ATAATGGCTCACTGTCCGAAA 57.373 42.857 0.00 0.00 0.00 3.46
2132 8604 3.270027 CAATAATGGCTCACTGTCCGAA 58.730 45.455 0.00 0.00 0.00 4.30
2133 8605 2.236146 ACAATAATGGCTCACTGTCCGA 59.764 45.455 0.00 0.00 0.00 4.55
2134 8606 2.632377 ACAATAATGGCTCACTGTCCG 58.368 47.619 0.00 0.00 0.00 4.79
2135 8607 4.009675 TCAACAATAATGGCTCACTGTCC 58.990 43.478 0.00 0.00 0.00 4.02
2136 8608 4.937620 TCTCAACAATAATGGCTCACTGTC 59.062 41.667 0.00 0.00 0.00 3.51
2137 8609 4.910195 TCTCAACAATAATGGCTCACTGT 58.090 39.130 0.00 0.00 0.00 3.55
2138 8610 5.885230 TTCTCAACAATAATGGCTCACTG 57.115 39.130 0.00 0.00 0.00 3.66
2139 8611 6.660521 TCATTTCTCAACAATAATGGCTCACT 59.339 34.615 0.00 0.00 0.00 3.41
2140 8612 6.855836 TCATTTCTCAACAATAATGGCTCAC 58.144 36.000 0.00 0.00 0.00 3.51
2141 8613 7.649533 ATCATTTCTCAACAATAATGGCTCA 57.350 32.000 0.00 0.00 0.00 4.26
2152 8624 9.671279 AGTGTGTGATAATATCATTTCTCAACA 57.329 29.630 6.21 0.00 42.04 3.33
2155 8627 9.889128 TCAAGTGTGTGATAATATCATTTCTCA 57.111 29.630 6.21 0.00 42.04 3.27
2161 8633 9.499479 GGAATCTCAAGTGTGTGATAATATCAT 57.501 33.333 6.21 0.00 42.04 2.45
2162 8634 8.708378 AGGAATCTCAAGTGTGTGATAATATCA 58.292 33.333 0.00 0.00 37.06 2.15
2163 8635 8.986847 CAGGAATCTCAAGTGTGTGATAATATC 58.013 37.037 0.00 0.00 37.06 1.63
2164 8636 7.443575 GCAGGAATCTCAAGTGTGTGATAATAT 59.556 37.037 0.00 0.00 37.06 1.28
2165 8637 6.763135 GCAGGAATCTCAAGTGTGTGATAATA 59.237 38.462 0.00 0.00 37.06 0.98
2166 8638 5.587844 GCAGGAATCTCAAGTGTGTGATAAT 59.412 40.000 0.00 0.00 37.06 1.28
2167 8639 4.937620 GCAGGAATCTCAAGTGTGTGATAA 59.062 41.667 0.00 0.00 37.06 1.75
2168 8640 4.223700 AGCAGGAATCTCAAGTGTGTGATA 59.776 41.667 0.00 0.00 37.06 2.15
2169 8641 3.008813 AGCAGGAATCTCAAGTGTGTGAT 59.991 43.478 0.00 0.00 39.17 3.06
2170 8642 2.369860 AGCAGGAATCTCAAGTGTGTGA 59.630 45.455 0.00 0.00 0.00 3.58
2171 8643 2.775890 AGCAGGAATCTCAAGTGTGTG 58.224 47.619 0.00 0.00 0.00 3.82
2172 8644 3.324846 TGTAGCAGGAATCTCAAGTGTGT 59.675 43.478 0.00 0.00 0.00 3.72
2173 8645 3.930336 TGTAGCAGGAATCTCAAGTGTG 58.070 45.455 0.00 0.00 0.00 3.82
2174 8646 4.833478 ATGTAGCAGGAATCTCAAGTGT 57.167 40.909 0.00 0.00 0.00 3.55
2175 8647 6.072286 ACAAAATGTAGCAGGAATCTCAAGTG 60.072 38.462 0.00 0.00 0.00 3.16
2176 8648 6.006449 ACAAAATGTAGCAGGAATCTCAAGT 58.994 36.000 0.00 0.00 0.00 3.16
2177 8649 6.506500 ACAAAATGTAGCAGGAATCTCAAG 57.493 37.500 0.00 0.00 0.00 3.02
2178 8650 6.265196 ACAACAAAATGTAGCAGGAATCTCAA 59.735 34.615 0.00 0.00 0.00 3.02
2179 8651 5.769662 ACAACAAAATGTAGCAGGAATCTCA 59.230 36.000 0.00 0.00 0.00 3.27
2180 8652 6.259550 ACAACAAAATGTAGCAGGAATCTC 57.740 37.500 0.00 0.00 0.00 2.75
2181 8653 6.655078 AACAACAAAATGTAGCAGGAATCT 57.345 33.333 0.00 0.00 32.02 2.40
2182 8654 6.146021 CCAAACAACAAAATGTAGCAGGAATC 59.854 38.462 0.00 0.00 32.02 2.52
2183 8655 5.990996 CCAAACAACAAAATGTAGCAGGAAT 59.009 36.000 0.00 0.00 32.02 3.01
2184 8656 5.355596 CCAAACAACAAAATGTAGCAGGAA 58.644 37.500 0.00 0.00 32.02 3.36
2185 8657 4.202202 CCCAAACAACAAAATGTAGCAGGA 60.202 41.667 0.00 0.00 32.02 3.86
2186 8658 4.057432 CCCAAACAACAAAATGTAGCAGG 58.943 43.478 0.00 0.00 32.02 4.85
2187 8659 3.494251 GCCCAAACAACAAAATGTAGCAG 59.506 43.478 0.00 0.00 32.02 4.24
2188 8660 3.118629 TGCCCAAACAACAAAATGTAGCA 60.119 39.130 0.00 0.00 32.02 3.49
2189 8661 3.462021 TGCCCAAACAACAAAATGTAGC 58.538 40.909 0.00 0.00 32.02 3.58
2190 8662 5.584251 ACTTTGCCCAAACAACAAAATGTAG 59.416 36.000 0.00 0.00 33.24 2.74
2191 8663 5.491982 ACTTTGCCCAAACAACAAAATGTA 58.508 33.333 0.00 0.00 33.24 2.29
2192 8664 4.331108 ACTTTGCCCAAACAACAAAATGT 58.669 34.783 0.00 0.00 33.24 2.71
2193 8665 4.961435 ACTTTGCCCAAACAACAAAATG 57.039 36.364 0.00 0.00 33.24 2.32
2194 8666 5.242615 ACAAACTTTGCCCAAACAACAAAAT 59.757 32.000 1.14 0.00 33.24 1.82
2195 8667 4.580580 ACAAACTTTGCCCAAACAACAAAA 59.419 33.333 1.14 0.00 33.24 2.44
2196 8668 4.137543 ACAAACTTTGCCCAAACAACAAA 58.862 34.783 1.14 0.00 0.00 2.83
2197 8669 3.744660 ACAAACTTTGCCCAAACAACAA 58.255 36.364 1.14 0.00 0.00 2.83
2198 8670 3.007398 AGACAAACTTTGCCCAAACAACA 59.993 39.130 1.14 0.00 0.00 3.33
2199 8671 3.595173 AGACAAACTTTGCCCAAACAAC 58.405 40.909 1.14 0.00 0.00 3.32
2200 8672 3.971245 AGACAAACTTTGCCCAAACAA 57.029 38.095 1.14 0.00 0.00 2.83
2201 8673 3.971245 AAGACAAACTTTGCCCAAACA 57.029 38.095 1.14 0.00 34.94 2.83
2202 8674 6.536941 TGAAATAAGACAAACTTTGCCCAAAC 59.463 34.615 1.14 0.00 39.72 2.93
2203 8675 6.644347 TGAAATAAGACAAACTTTGCCCAAA 58.356 32.000 1.14 0.00 39.72 3.28
2204 8676 6.097554 TCTGAAATAAGACAAACTTTGCCCAA 59.902 34.615 1.14 0.00 39.72 4.12
2205 8677 5.596361 TCTGAAATAAGACAAACTTTGCCCA 59.404 36.000 1.14 0.00 39.72 5.36
2206 8678 6.084326 TCTGAAATAAGACAAACTTTGCCC 57.916 37.500 1.14 0.00 39.72 5.36
2207 8679 6.739112 ACTCTGAAATAAGACAAACTTTGCC 58.261 36.000 1.14 0.00 39.72 4.52
2208 8680 9.899226 AATACTCTGAAATAAGACAAACTTTGC 57.101 29.630 1.14 0.00 39.72 3.68
2212 8684 9.924650 ACGTAATACTCTGAAATAAGACAAACT 57.075 29.630 0.00 0.00 0.00 2.66
2227 8699 9.811995 TGCTGATAAAACATTACGTAATACTCT 57.188 29.630 19.95 8.53 0.00 3.24
2228 8700 9.845305 GTGCTGATAAAACATTACGTAATACTC 57.155 33.333 19.95 10.82 0.00 2.59
2229 8701 9.595823 AGTGCTGATAAAACATTACGTAATACT 57.404 29.630 19.95 12.14 0.00 2.12
2230 8702 9.632969 CAGTGCTGATAAAACATTACGTAATAC 57.367 33.333 19.95 10.22 0.00 1.89
2231 8703 8.332464 GCAGTGCTGATAAAACATTACGTAATA 58.668 33.333 19.95 5.38 0.00 0.98
2232 8704 7.065803 AGCAGTGCTGATAAAACATTACGTAAT 59.934 33.333 18.98 15.07 37.57 1.89
2233 8705 6.370442 AGCAGTGCTGATAAAACATTACGTAA 59.630 34.615 18.98 11.02 37.57 3.18
2234 8706 5.872617 AGCAGTGCTGATAAAACATTACGTA 59.127 36.000 18.98 0.00 37.57 3.57
2235 8707 4.695455 AGCAGTGCTGATAAAACATTACGT 59.305 37.500 18.98 0.00 37.57 3.57
2236 8708 5.221891 AGCAGTGCTGATAAAACATTACG 57.778 39.130 18.98 0.00 37.57 3.18
2237 8709 8.826710 TGTATAGCAGTGCTGATAAAACATTAC 58.173 33.333 27.97 12.27 40.10 1.89
2238 8710 8.826710 GTGTATAGCAGTGCTGATAAAACATTA 58.173 33.333 27.97 2.83 40.10 1.90
2239 8711 7.336679 TGTGTATAGCAGTGCTGATAAAACATT 59.663 33.333 27.97 0.00 40.10 2.71
2240 8712 6.823182 TGTGTATAGCAGTGCTGATAAAACAT 59.177 34.615 27.97 12.54 40.10 2.71
2241 8713 6.092122 GTGTGTATAGCAGTGCTGATAAAACA 59.908 38.462 27.97 19.01 40.10 2.83
2242 8714 6.478588 GTGTGTATAGCAGTGCTGATAAAAC 58.521 40.000 27.97 16.87 40.10 2.43
2243 8715 5.290885 CGTGTGTATAGCAGTGCTGATAAAA 59.709 40.000 27.97 6.69 40.10 1.52
2244 8716 4.803613 CGTGTGTATAGCAGTGCTGATAAA 59.196 41.667 27.97 12.84 40.10 1.40
2245 8717 4.097286 TCGTGTGTATAGCAGTGCTGATAA 59.903 41.667 27.97 7.94 40.10 1.75
2246 8718 3.630312 TCGTGTGTATAGCAGTGCTGATA 59.370 43.478 27.97 16.75 40.10 2.15
2247 8719 2.427095 TCGTGTGTATAGCAGTGCTGAT 59.573 45.455 27.97 17.69 40.10 2.90
2248 8720 1.816224 TCGTGTGTATAGCAGTGCTGA 59.184 47.619 27.97 12.61 40.10 4.26
2249 8721 2.278026 TCGTGTGTATAGCAGTGCTG 57.722 50.000 27.97 8.19 40.10 4.41
2250 8722 2.166459 ACATCGTGTGTATAGCAGTGCT 59.834 45.455 23.44 23.44 39.91 4.40
2251 8723 2.535984 GACATCGTGTGTATAGCAGTGC 59.464 50.000 7.13 7.13 42.36 4.40
2252 8724 3.116300 GGACATCGTGTGTATAGCAGTG 58.884 50.000 0.00 0.00 42.36 3.66
2253 8725 3.024547 AGGACATCGTGTGTATAGCAGT 58.975 45.455 0.00 0.00 42.36 4.40
2254 8726 3.316588 AGAGGACATCGTGTGTATAGCAG 59.683 47.826 0.00 0.00 42.36 4.24
2255 8727 3.066760 CAGAGGACATCGTGTGTATAGCA 59.933 47.826 0.00 0.00 42.36 3.49
2256 8728 3.551046 CCAGAGGACATCGTGTGTATAGC 60.551 52.174 0.00 0.00 42.36 2.97
2257 8729 3.551046 GCCAGAGGACATCGTGTGTATAG 60.551 52.174 0.00 0.00 42.36 1.31
2258 8730 2.361119 GCCAGAGGACATCGTGTGTATA 59.639 50.000 0.00 0.00 42.36 1.47
2259 8731 1.137086 GCCAGAGGACATCGTGTGTAT 59.863 52.381 0.00 0.00 42.36 2.29
2260 8732 0.530744 GCCAGAGGACATCGTGTGTA 59.469 55.000 0.00 0.00 42.36 2.90
2261 8733 1.293498 GCCAGAGGACATCGTGTGT 59.707 57.895 0.00 0.00 45.83 3.72
2262 8734 1.448540 GGCCAGAGGACATCGTGTG 60.449 63.158 0.00 0.00 0.00 3.82
2263 8735 2.982130 GGCCAGAGGACATCGTGT 59.018 61.111 0.00 0.00 0.00 4.49
2264 8736 2.021068 ATCGGCCAGAGGACATCGTG 62.021 60.000 2.24 0.00 0.00 4.35
2265 8737 1.330655 AATCGGCCAGAGGACATCGT 61.331 55.000 2.24 0.00 0.00 3.73
2266 8738 0.179073 AAATCGGCCAGAGGACATCG 60.179 55.000 2.24 0.00 0.00 3.84
2267 8739 2.910688 TAAATCGGCCAGAGGACATC 57.089 50.000 2.24 0.00 0.00 3.06
2268 8740 2.811873 GCATAAATCGGCCAGAGGACAT 60.812 50.000 2.24 0.00 0.00 3.06
2269 8741 1.475034 GCATAAATCGGCCAGAGGACA 60.475 52.381 2.24 0.00 0.00 4.02
2270 8742 1.230324 GCATAAATCGGCCAGAGGAC 58.770 55.000 2.24 0.00 0.00 3.85
2271 8743 0.836606 TGCATAAATCGGCCAGAGGA 59.163 50.000 2.24 0.00 0.00 3.71
2272 8744 0.947244 GTGCATAAATCGGCCAGAGG 59.053 55.000 2.24 0.00 0.00 3.69
2273 8745 0.583438 CGTGCATAAATCGGCCAGAG 59.417 55.000 2.24 0.00 0.00 3.35
2274 8746 0.176910 TCGTGCATAAATCGGCCAGA 59.823 50.000 2.24 0.78 0.00 3.86
2275 8747 1.069703 CATCGTGCATAAATCGGCCAG 60.070 52.381 2.24 0.00 0.00 4.85
2276 8748 0.943673 CATCGTGCATAAATCGGCCA 59.056 50.000 2.24 0.00 0.00 5.36
2277 8749 0.944386 ACATCGTGCATAAATCGGCC 59.056 50.000 0.00 0.00 0.00 6.13
2278 8750 2.223249 ACAACATCGTGCATAAATCGGC 60.223 45.455 0.00 0.00 0.00 5.54
2279 8751 3.673746 ACAACATCGTGCATAAATCGG 57.326 42.857 0.00 0.00 0.00 4.18
2280 8752 6.904543 TGATTAACAACATCGTGCATAAATCG 59.095 34.615 0.00 0.00 0.00 3.34
2281 8753 8.613613 TTGATTAACAACATCGTGCATAAATC 57.386 30.769 0.00 0.00 33.18 2.17
2282 8754 7.220683 GCTTGATTAACAACATCGTGCATAAAT 59.779 33.333 0.00 0.00 34.56 1.40
2283 8755 6.526325 GCTTGATTAACAACATCGTGCATAAA 59.474 34.615 0.00 0.00 34.56 1.40
2284 8756 6.027131 GCTTGATTAACAACATCGTGCATAA 58.973 36.000 0.00 0.00 34.56 1.90
2285 8757 5.353956 AGCTTGATTAACAACATCGTGCATA 59.646 36.000 0.00 0.00 34.56 3.14
2286 8758 4.156556 AGCTTGATTAACAACATCGTGCAT 59.843 37.500 0.00 0.00 34.56 3.96
2287 8759 3.501828 AGCTTGATTAACAACATCGTGCA 59.498 39.130 0.00 0.00 34.56 4.57
2288 8760 3.848019 CAGCTTGATTAACAACATCGTGC 59.152 43.478 0.00 0.00 34.56 5.34
2289 8761 5.034554 ACAGCTTGATTAACAACATCGTG 57.965 39.130 0.00 0.00 34.56 4.35
2290 8762 5.451908 CAACAGCTTGATTAACAACATCGT 58.548 37.500 0.00 0.00 34.56 3.73
2291 8763 4.853196 CCAACAGCTTGATTAACAACATCG 59.147 41.667 0.00 0.00 34.56 3.84
2292 8764 5.630680 CACCAACAGCTTGATTAACAACATC 59.369 40.000 0.00 0.00 34.56 3.06
2293 8765 5.068987 ACACCAACAGCTTGATTAACAACAT 59.931 36.000 0.00 0.00 34.56 2.71
2294 8766 4.400884 ACACCAACAGCTTGATTAACAACA 59.599 37.500 0.00 0.00 34.56 3.33
2295 8767 4.932146 ACACCAACAGCTTGATTAACAAC 58.068 39.130 0.00 0.00 34.56 3.32
2296 8768 5.590530 AACACCAACAGCTTGATTAACAA 57.409 34.783 0.00 0.00 36.97 2.83
2297 8769 5.240623 CCTAACACCAACAGCTTGATTAACA 59.759 40.000 0.00 0.00 0.00 2.41
2298 8770 5.472137 TCCTAACACCAACAGCTTGATTAAC 59.528 40.000 0.00 0.00 0.00 2.01
2299 8771 5.626142 TCCTAACACCAACAGCTTGATTAA 58.374 37.500 0.00 0.00 0.00 1.40
2300 8772 5.235850 TCCTAACACCAACAGCTTGATTA 57.764 39.130 0.00 0.00 0.00 1.75
2301 8773 4.098914 TCCTAACACCAACAGCTTGATT 57.901 40.909 0.00 0.00 0.00 2.57
2302 8774 3.788227 TCCTAACACCAACAGCTTGAT 57.212 42.857 0.00 0.00 0.00 2.57
2303 8775 3.476552 CTTCCTAACACCAACAGCTTGA 58.523 45.455 0.00 0.00 0.00 3.02
2304 8776 2.030805 GCTTCCTAACACCAACAGCTTG 60.031 50.000 0.00 0.00 0.00 4.01
2305 8777 2.230660 GCTTCCTAACACCAACAGCTT 58.769 47.619 0.00 0.00 0.00 3.74
2306 8778 1.142870 TGCTTCCTAACACCAACAGCT 59.857 47.619 0.00 0.00 0.00 4.24
2307 8779 1.537202 CTGCTTCCTAACACCAACAGC 59.463 52.381 0.00 0.00 0.00 4.40
2308 8780 1.537202 GCTGCTTCCTAACACCAACAG 59.463 52.381 0.00 0.00 0.00 3.16
2309 8781 1.133945 TGCTGCTTCCTAACACCAACA 60.134 47.619 0.00 0.00 0.00 3.33
2310 8782 1.604604 TGCTGCTTCCTAACACCAAC 58.395 50.000 0.00 0.00 0.00 3.77
2311 8783 2.436417 GATGCTGCTTCCTAACACCAA 58.564 47.619 0.00 0.00 0.00 3.67
2312 8784 1.340017 GGATGCTGCTTCCTAACACCA 60.340 52.381 23.14 0.00 0.00 4.17
2313 8785 1.340017 TGGATGCTGCTTCCTAACACC 60.340 52.381 28.16 7.88 34.17 4.16
2314 8786 1.740025 GTGGATGCTGCTTCCTAACAC 59.260 52.381 28.16 17.59 34.17 3.32
2315 8787 1.350684 TGTGGATGCTGCTTCCTAACA 59.649 47.619 28.16 22.90 34.17 2.41
2316 8788 2.113860 TGTGGATGCTGCTTCCTAAC 57.886 50.000 28.16 21.08 34.17 2.34
2317 8789 2.224744 TGTTGTGGATGCTGCTTCCTAA 60.225 45.455 28.16 21.34 34.17 2.69
2318 8790 1.350684 TGTTGTGGATGCTGCTTCCTA 59.649 47.619 28.16 17.77 34.17 2.94
2319 8791 0.111061 TGTTGTGGATGCTGCTTCCT 59.889 50.000 28.16 0.76 34.17 3.36
2320 8792 1.133790 GATGTTGTGGATGCTGCTTCC 59.866 52.381 23.52 23.52 0.00 3.46
2321 8793 1.814394 TGATGTTGTGGATGCTGCTTC 59.186 47.619 6.97 6.97 0.00 3.86
2322 8794 1.913778 TGATGTTGTGGATGCTGCTT 58.086 45.000 0.00 0.00 0.00 3.91
2323 8795 2.022195 GATGATGTTGTGGATGCTGCT 58.978 47.619 0.00 0.00 0.00 4.24
2324 8796 1.066605 GGATGATGTTGTGGATGCTGC 59.933 52.381 0.00 0.00 0.00 5.25
2325 8797 1.332686 CGGATGATGTTGTGGATGCTG 59.667 52.381 0.00 0.00 0.00 4.41
2326 8798 1.210234 TCGGATGATGTTGTGGATGCT 59.790 47.619 0.00 0.00 0.00 3.79
2327 8799 1.667236 TCGGATGATGTTGTGGATGC 58.333 50.000 0.00 0.00 0.00 3.91
2328 8800 2.810274 GGATCGGATGATGTTGTGGATG 59.190 50.000 0.00 0.00 34.09 3.51
2329 8801 2.548707 CGGATCGGATGATGTTGTGGAT 60.549 50.000 0.00 0.00 34.09 3.41
2330 8802 1.202521 CGGATCGGATGATGTTGTGGA 60.203 52.381 0.00 0.00 34.09 4.02
2331 8803 1.202521 TCGGATCGGATGATGTTGTGG 60.203 52.381 0.00 0.00 34.09 4.17
2332 8804 2.223537 TCGGATCGGATGATGTTGTG 57.776 50.000 0.00 0.00 34.09 3.33
2333 8805 3.475566 AATCGGATCGGATGATGTTGT 57.524 42.857 15.73 0.00 34.09 3.32
2334 8806 4.201753 GCATAATCGGATCGGATGATGTTG 60.202 45.833 28.47 14.90 37.52 3.33
2335 8807 3.935203 GCATAATCGGATCGGATGATGTT 59.065 43.478 28.47 13.84 37.52 2.71
2336 8808 3.055891 TGCATAATCGGATCGGATGATGT 60.056 43.478 28.47 13.57 37.52 3.06
2337 8809 3.524541 TGCATAATCGGATCGGATGATG 58.475 45.455 25.98 25.98 38.03 3.07
2338 8810 3.893326 TGCATAATCGGATCGGATGAT 57.107 42.857 15.73 11.34 37.60 2.45
2339 8811 3.785486 GATGCATAATCGGATCGGATGA 58.215 45.455 15.73 9.47 0.00 2.92
2356 8828 0.521242 GACCGATTTGTGCACGATGC 60.521 55.000 13.13 4.56 45.29 3.91
2357 8829 0.795698 TGACCGATTTGTGCACGATG 59.204 50.000 13.13 3.54 0.00 3.84
2358 8830 1.398041 CATGACCGATTTGTGCACGAT 59.602 47.619 13.13 8.85 0.00 3.73
2359 8831 0.795698 CATGACCGATTTGTGCACGA 59.204 50.000 13.13 7.71 0.00 4.35
2360 8832 0.794229 GCATGACCGATTTGTGCACG 60.794 55.000 13.13 0.00 35.93 5.34
2361 8833 0.240678 TGCATGACCGATTTGTGCAC 59.759 50.000 10.75 10.75 40.51 4.57
2362 8834 0.240678 GTGCATGACCGATTTGTGCA 59.759 50.000 0.00 0.00 42.86 4.57
2363 8835 0.794229 CGTGCATGACCGATTTGTGC 60.794 55.000 0.00 0.00 36.39 4.57
2364 8836 0.516877 ACGTGCATGACCGATTTGTG 59.483 50.000 14.17 0.00 0.00 3.33
2365 8837 0.516877 CACGTGCATGACCGATTTGT 59.483 50.000 14.17 0.00 0.00 2.83
2366 8838 0.179192 CCACGTGCATGACCGATTTG 60.179 55.000 14.17 0.00 0.00 2.32
2367 8839 0.605319 ACCACGTGCATGACCGATTT 60.605 50.000 14.17 0.00 0.00 2.17
2368 8840 1.003839 ACCACGTGCATGACCGATT 60.004 52.632 14.17 0.00 0.00 3.34
2369 8841 1.741401 CACCACGTGCATGACCGAT 60.741 57.895 14.17 0.00 0.00 4.18
2370 8842 2.356913 CACCACGTGCATGACCGA 60.357 61.111 14.17 0.00 0.00 4.69
2379 8851 1.295792 ACTACTTTGTGCACCACGTG 58.704 50.000 15.69 9.08 37.14 4.49
2380 8852 2.032680 AACTACTTTGTGCACCACGT 57.967 45.000 15.69 9.95 37.14 4.49
2381 8853 2.598907 CGAAACTACTTTGTGCACCACG 60.599 50.000 15.69 3.24 37.14 4.94
2382 8854 2.610374 TCGAAACTACTTTGTGCACCAC 59.390 45.455 15.69 0.00 34.56 4.16
2383 8855 2.907634 TCGAAACTACTTTGTGCACCA 58.092 42.857 15.69 0.00 0.00 4.17
2384 8856 3.250040 ACATCGAAACTACTTTGTGCACC 59.750 43.478 15.69 0.00 0.00 5.01
2385 8857 4.468095 ACATCGAAACTACTTTGTGCAC 57.532 40.909 10.75 10.75 0.00 4.57
2386 8858 5.493133 AAACATCGAAACTACTTTGTGCA 57.507 34.783 0.00 0.00 0.00 4.57
2387 8859 5.968848 TCAAAACATCGAAACTACTTTGTGC 59.031 36.000 0.00 0.00 0.00 4.57
2388 8860 8.560576 AATCAAAACATCGAAACTACTTTGTG 57.439 30.769 0.00 0.00 0.00 3.33
2454 8926 1.805428 AAGTGGATTTGCCGGCACAC 61.805 55.000 32.95 31.38 40.66 3.82
2486 11389 1.202348 GCAACAGTAATGGGAAGTGCC 59.798 52.381 0.00 0.00 0.00 5.01
2509 11412 3.424703 CCAGGTCATGAAACACCAAGAT 58.575 45.455 0.00 0.00 34.80 2.40
2620 11523 4.979197 TGAAATTTGTACGTGTCCAATTGC 59.021 37.500 0.00 1.18 0.00 3.56
2702 11605 1.652563 GGTGCCGTGGTTTCACTTC 59.347 57.895 0.00 0.00 41.53 3.01
2704 11607 2.391724 ATCGGTGCCGTGGTTTCACT 62.392 55.000 10.60 0.00 41.53 3.41
2705 11608 1.964373 ATCGGTGCCGTGGTTTCAC 60.964 57.895 10.60 0.00 40.74 3.18
2706 11609 1.963855 CATCGGTGCCGTGGTTTCA 60.964 57.895 10.60 0.00 40.74 2.69
2707 11610 1.635663 CTCATCGGTGCCGTGGTTTC 61.636 60.000 10.60 0.00 40.74 2.78
2708 11611 1.671054 CTCATCGGTGCCGTGGTTT 60.671 57.895 10.60 0.00 40.74 3.27
2714 11617 2.512286 ATGTGCTCATCGGTGCCG 60.512 61.111 3.94 3.94 41.35 5.69
2722 11625 3.900966 TCTTACTGCTGATGTGCTCAT 57.099 42.857 0.00 0.00 36.95 2.90
2726 11629 9.604626 GAATATAATTTCTTACTGCTGATGTGC 57.395 33.333 0.00 0.00 0.00 4.57
2733 11636 8.213679 TGCCTCTGAATATAATTTCTTACTGCT 58.786 33.333 0.00 0.00 0.00 4.24
2734 11637 8.383318 TGCCTCTGAATATAATTTCTTACTGC 57.617 34.615 0.00 0.00 0.00 4.40
2792 11695 1.595109 CTGACACAACTCTGCCGCA 60.595 57.895 0.00 0.00 0.00 5.69
2793 11696 2.320587 CCTGACACAACTCTGCCGC 61.321 63.158 0.00 0.00 0.00 6.53
2890 11793 3.941483 GCATCACCACACAGCTAATTAGT 59.059 43.478 13.91 0.00 0.00 2.24
2891 11794 3.940852 TGCATCACCACACAGCTAATTAG 59.059 43.478 8.20 8.20 0.00 1.73
2892 11795 3.949132 TGCATCACCACACAGCTAATTA 58.051 40.909 0.00 0.00 0.00 1.40
2894 11797 2.495155 TGCATCACCACACAGCTAAT 57.505 45.000 0.00 0.00 0.00 1.73
2895 11798 2.086094 CATGCATCACCACACAGCTAA 58.914 47.619 0.00 0.00 0.00 3.09
2896 11799 1.741528 CATGCATCACCACACAGCTA 58.258 50.000 0.00 0.00 0.00 3.32
2897 11800 1.592400 GCATGCATCACCACACAGCT 61.592 55.000 14.21 0.00 0.00 4.24
2898 11801 1.153901 GCATGCATCACCACACAGC 60.154 57.895 14.21 0.00 0.00 4.40
2900 11803 2.259281 CAGCATGCATCACCACACA 58.741 52.632 21.98 0.00 0.00 3.72
2930 11843 6.176014 AGACTGAAGTTGCTAAAAGGTAGT 57.824 37.500 0.00 0.00 0.00 2.73
2931 11844 7.148557 GCTAAGACTGAAGTTGCTAAAAGGTAG 60.149 40.741 0.00 0.00 0.00 3.18
2932 11845 6.649557 GCTAAGACTGAAGTTGCTAAAAGGTA 59.350 38.462 0.00 0.00 0.00 3.08
2933 11846 5.470437 GCTAAGACTGAAGTTGCTAAAAGGT 59.530 40.000 0.00 0.00 0.00 3.50
2949 11862 2.036475 CACAGTCCACACAGCTAAGACT 59.964 50.000 0.00 0.00 38.30 3.24
2953 11866 1.344438 CTCCACAGTCCACACAGCTAA 59.656 52.381 0.00 0.00 0.00 3.09
2963 11876 2.419297 CCTGCATTAGTCTCCACAGTCC 60.419 54.545 0.00 0.00 0.00 3.85
2966 11879 2.027745 ACACCTGCATTAGTCTCCACAG 60.028 50.000 0.00 0.00 0.00 3.66
2967 11880 1.977854 ACACCTGCATTAGTCTCCACA 59.022 47.619 0.00 0.00 0.00 4.17
2968 11881 2.770164 ACACCTGCATTAGTCTCCAC 57.230 50.000 0.00 0.00 0.00 4.02
2969 11882 2.766263 CCTACACCTGCATTAGTCTCCA 59.234 50.000 0.00 0.00 0.00 3.86
2970 11883 3.031736 TCCTACACCTGCATTAGTCTCC 58.968 50.000 0.00 0.00 0.00 3.71
2971 11884 4.946478 ATCCTACACCTGCATTAGTCTC 57.054 45.455 0.00 0.00 0.00 3.36
2972 11885 4.716784 TGAATCCTACACCTGCATTAGTCT 59.283 41.667 0.00 0.00 0.00 3.24
2973 11886 5.023533 TGAATCCTACACCTGCATTAGTC 57.976 43.478 0.00 0.00 0.00 2.59
2974 11887 4.141620 CCTGAATCCTACACCTGCATTAGT 60.142 45.833 0.00 0.00 0.00 2.24
2975 11888 4.101585 TCCTGAATCCTACACCTGCATTAG 59.898 45.833 0.00 0.00 0.00 1.73
3011 11924 1.122227 ACACCTGCATTGGCTGTTTT 58.878 45.000 0.00 0.00 41.91 2.43
3025 11938 1.651770 TCCCTCCTGAATCCTACACCT 59.348 52.381 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.