Multiple sequence alignment - TraesCS7D01G033500
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS7D01G033500
chr7D
100.000
4703
0
0
1
4703
17256771
17261473
0.000000e+00
8685.0
1
TraesCS7D01G033500
chr7D
97.255
255
7
0
4449
4703
52479573
52479319
2.600000e-117
433.0
2
TraesCS7D01G033500
chr7D
96.850
254
8
0
4450
4703
78287640
78287893
4.350000e-115
425.0
3
TraesCS7D01G033500
chr7D
96.498
257
8
1
4447
4703
283976261
283976516
1.560000e-114
424.0
4
TraesCS7D01G033500
chr7A
97.363
4210
80
14
259
4449
16649190
16653387
0.000000e+00
7131.0
5
TraesCS7D01G033500
chr7A
91.080
213
9
5
1
204
16648966
16649177
3.580000e-71
279.0
6
TraesCS7D01G033500
chr4A
91.615
1443
101
2
2690
4117
716997197
716995760
0.000000e+00
1977.0
7
TraesCS7D01G033500
chr4A
84.841
1227
156
17
2709
3911
676544657
676545877
0.000000e+00
1208.0
8
TraesCS7D01G033500
chr4A
86.066
1055
133
10
1689
2736
716998390
716997343
0.000000e+00
1122.0
9
TraesCS7D01G033500
chr4A
89.276
718
54
10
1000
1695
716999175
716998459
0.000000e+00
878.0
10
TraesCS7D01G033500
chr4A
83.487
866
109
17
714
1570
676542505
676543345
0.000000e+00
776.0
11
TraesCS7D01G033500
chr4A
87.398
492
56
2
1850
2335
676543682
676544173
1.140000e-155
560.0
12
TraesCS7D01G033500
chr4A
84.900
351
32
8
2373
2722
676544283
676544613
7.540000e-88
335.0
13
TraesCS7D01G033500
chr4A
78.440
218
31
12
370
582
676542225
676542431
1.370000e-25
128.0
14
TraesCS7D01G033500
chr5D
83.236
1372
184
16
2592
3931
344807793
344806436
0.000000e+00
1218.0
15
TraesCS7D01G033500
chr5D
82.563
1038
131
33
669
1687
344809791
344808785
0.000000e+00
869.0
16
TraesCS7D01G033500
chr5D
86.076
790
99
8
1844
2623
344808601
344807813
0.000000e+00
839.0
17
TraesCS7D01G033500
chr5D
97.266
256
7
0
4448
4703
431646412
431646667
7.230000e-118
435.0
18
TraesCS7D01G033500
chr5D
97.600
250
6
0
4450
4699
324638998
324639247
3.360000e-116
429.0
19
TraesCS7D01G033500
chr5D
96.850
254
8
0
4450
4703
398509479
398509226
4.350000e-115
425.0
20
TraesCS7D01G033500
chr5D
78.827
307
48
13
4098
4396
61024076
61023779
1.730000e-44
191.0
21
TraesCS7D01G033500
chr5D
77.483
151
20
10
370
519
344810101
344809964
1.400000e-10
78.7
22
TraesCS7D01G033500
chr5B
83.164
1378
181
19
2592
3931
406949842
406951206
0.000000e+00
1212.0
23
TraesCS7D01G033500
chr5B
83.285
1035
123
35
662
1689
406947841
406948832
0.000000e+00
907.0
24
TraesCS7D01G033500
chr5B
85.696
790
98
12
1844
2623
406949014
406949798
0.000000e+00
819.0
25
TraesCS7D01G033500
chr5B
80.925
173
25
6
4227
4396
69805664
69805831
3.820000e-26
130.0
26
TraesCS7D01G033500
chr4D
96.863
255
8
0
4449
4703
25183902
25183648
1.210000e-115
427.0
27
TraesCS7D01G033500
chr4D
96.875
256
7
1
4448
4703
498097745
498097491
1.210000e-115
427.0
28
TraesCS7D01G033500
chr6D
97.211
251
7
0
4449
4699
22276949
22277199
4.350000e-115
425.0
29
TraesCS7D01G033500
chr1D
73.525
729
163
26
1844
2557
486755903
486756616
2.810000e-62
250.0
30
TraesCS7D01G033500
chr2B
81.609
174
27
3
4220
4392
244696844
244697013
6.350000e-29
139.0
31
TraesCS7D01G033500
chr6A
100.000
28
0
0
2239
2266
213783577
213783604
9.000000e-03
52.8
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS7D01G033500
chr7D
17256771
17261473
4702
False
8685.000000
8685
100.000000
1
4703
1
chr7D.!!$F1
4702
1
TraesCS7D01G033500
chr7A
16648966
16653387
4421
False
3705.000000
7131
94.221500
1
4449
2
chr7A.!!$F1
4448
2
TraesCS7D01G033500
chr4A
716995760
716999175
3415
True
1325.666667
1977
88.985667
1000
4117
3
chr4A.!!$R1
3117
3
TraesCS7D01G033500
chr4A
676542225
676545877
3652
False
601.400000
1208
83.813200
370
3911
5
chr4A.!!$F1
3541
4
TraesCS7D01G033500
chr5D
344806436
344810101
3665
True
751.175000
1218
82.339500
370
3931
4
chr5D.!!$R3
3561
5
TraesCS7D01G033500
chr5B
406947841
406951206
3365
False
979.333333
1212
84.048333
662
3931
3
chr5B.!!$F2
3269
6
TraesCS7D01G033500
chr1D
486755903
486756616
713
False
250.000000
250
73.525000
1844
2557
1
chr1D.!!$F1
713
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
220
229
0.037790
GGTCGAGGATATGCTCTGGC
60.038
60.000
20.42
15.05
39.26
4.85
F
300
309
0.179073
CAGAGCCGTTACTCCATGGG
60.179
60.000
13.02
5.22
37.39
4.00
F
411
426
0.322098
CCCAGGTACCGACAATGCAA
60.322
55.000
6.18
0.00
0.00
4.08
F
1384
1452
1.270358
GGAGGAACGTGTTCAAGCTCT
60.270
52.381
14.16
2.16
41.20
4.09
F
2304
2590
0.392461
GGACACGCTTAATCCTGGCA
60.392
55.000
0.00
0.00
0.00
4.92
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1984
2270
1.424302
CTCCATGATCCTGAGGGCATT
59.576
52.381
0.0
0.0
0.00
3.56
R
2092
2378
2.119801
ATGGTCAGCATGGACAGAAC
57.880
50.000
0.0
0.0
39.59
3.01
R
2304
2590
3.453717
ACCTCATCTGCACATACTCACAT
59.546
43.478
0.0
0.0
0.00
3.21
R
2777
3516
0.097325
GTTGACGCCGTGTTTTGTCA
59.903
50.000
0.0
0.0
39.42
3.58
R
4031
4826
1.020861
AACGGTTACGGGCGGAAATC
61.021
55.000
0.0
0.0
46.48
2.17
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
35
36
8.420222
TGTATGGCCTTGTTGAATAATAATTGG
58.580
33.333
3.32
0.00
0.00
3.16
61
62
1.568612
ATGGTTGTGTGCTTCGCTCG
61.569
55.000
0.00
0.00
0.00
5.03
75
76
2.415010
CTCGATGCAGAGACCGGG
59.585
66.667
6.32
0.00
40.57
5.73
154
155
0.249826
TTGTCAGACACGCATGCTCA
60.250
50.000
17.13
0.00
0.00
4.26
163
164
2.277969
CACGCATGCTCAGATCTTCTT
58.722
47.619
17.13
0.00
0.00
2.52
164
165
2.284684
CACGCATGCTCAGATCTTCTTC
59.715
50.000
17.13
0.00
0.00
2.87
167
176
3.533547
GCATGCTCAGATCTTCTTCAGT
58.466
45.455
11.37
0.00
0.00
3.41
175
184
4.020751
TCAGATCTTCTTCAGTCCACAAGG
60.021
45.833
0.00
0.00
0.00
3.61
204
213
8.251721
ACAAAGTATATATTGCCTATCGAGGTC
58.748
37.037
0.00
0.00
45.78
3.85
215
224
3.727738
TCGAGGTCGAGGATATGCT
57.272
52.632
0.00
0.00
44.22
3.79
216
225
1.524848
TCGAGGTCGAGGATATGCTC
58.475
55.000
13.90
13.90
44.22
4.26
217
226
1.072489
TCGAGGTCGAGGATATGCTCT
59.928
52.381
20.42
3.20
44.22
4.09
218
227
1.198867
CGAGGTCGAGGATATGCTCTG
59.801
57.143
20.42
14.18
43.02
3.35
219
228
1.543802
GAGGTCGAGGATATGCTCTGG
59.456
57.143
20.42
7.60
0.00
3.86
220
229
0.037790
GGTCGAGGATATGCTCTGGC
60.038
60.000
20.42
15.05
39.26
4.85
221
230
0.965439
GTCGAGGATATGCTCTGGCT
59.035
55.000
20.42
0.00
39.59
4.75
222
231
2.163509
GTCGAGGATATGCTCTGGCTA
58.836
52.381
20.42
0.40
39.59
3.93
223
232
2.163412
GTCGAGGATATGCTCTGGCTAG
59.837
54.545
20.42
5.59
39.59
3.42
224
233
2.166829
CGAGGATATGCTCTGGCTAGT
58.833
52.381
20.42
0.00
39.59
2.57
225
234
2.094803
CGAGGATATGCTCTGGCTAGTG
60.095
54.545
20.42
0.00
39.59
2.74
226
235
2.233431
GAGGATATGCTCTGGCTAGTGG
59.767
54.545
16.38
0.00
39.59
4.00
227
236
1.974236
GGATATGCTCTGGCTAGTGGT
59.026
52.381
0.00
0.00
39.59
4.16
228
237
2.028567
GGATATGCTCTGGCTAGTGGTC
60.029
54.545
0.00
0.00
39.59
4.02
229
238
1.414158
TATGCTCTGGCTAGTGGTCC
58.586
55.000
0.00
0.00
39.59
4.46
230
239
0.326048
ATGCTCTGGCTAGTGGTCCT
60.326
55.000
0.00
0.00
39.59
3.85
231
240
1.260538
TGCTCTGGCTAGTGGTCCTG
61.261
60.000
0.00
0.00
39.59
3.86
232
241
0.972983
GCTCTGGCTAGTGGTCCTGA
60.973
60.000
0.00
0.00
35.22
3.86
233
242
1.786937
CTCTGGCTAGTGGTCCTGAT
58.213
55.000
0.00
0.00
31.37
2.90
234
243
1.411977
CTCTGGCTAGTGGTCCTGATG
59.588
57.143
0.00
0.00
31.37
3.07
235
244
1.007118
TCTGGCTAGTGGTCCTGATGA
59.993
52.381
0.00
0.00
0.00
2.92
236
245
2.045524
CTGGCTAGTGGTCCTGATGAT
58.954
52.381
0.00
0.00
0.00
2.45
237
246
2.036992
CTGGCTAGTGGTCCTGATGATC
59.963
54.545
0.00
0.00
0.00
2.92
238
247
2.324541
GGCTAGTGGTCCTGATGATCT
58.675
52.381
0.00
0.00
0.00
2.75
239
248
2.703007
GGCTAGTGGTCCTGATGATCTT
59.297
50.000
0.00
0.00
0.00
2.40
240
249
3.898123
GGCTAGTGGTCCTGATGATCTTA
59.102
47.826
0.00
0.00
0.00
2.10
241
250
4.345257
GGCTAGTGGTCCTGATGATCTTAA
59.655
45.833
0.00
0.00
0.00
1.85
242
251
5.012561
GGCTAGTGGTCCTGATGATCTTAAT
59.987
44.000
0.00
0.00
0.00
1.40
243
252
5.931146
GCTAGTGGTCCTGATGATCTTAATG
59.069
44.000
0.00
0.00
0.00
1.90
244
253
6.239430
GCTAGTGGTCCTGATGATCTTAATGA
60.239
42.308
0.00
0.00
0.00
2.57
245
254
6.760440
AGTGGTCCTGATGATCTTAATGAT
57.240
37.500
0.00
0.00
38.27
2.45
246
255
6.531923
AGTGGTCCTGATGATCTTAATGATG
58.468
40.000
0.00
0.00
35.14
3.07
247
256
6.328410
AGTGGTCCTGATGATCTTAATGATGA
59.672
38.462
0.00
0.00
35.14
2.92
248
257
6.994496
GTGGTCCTGATGATCTTAATGATGAA
59.006
38.462
0.00
0.00
35.14
2.57
249
258
7.172875
GTGGTCCTGATGATCTTAATGATGAAG
59.827
40.741
0.00
0.00
35.14
3.02
250
259
6.149142
GGTCCTGATGATCTTAATGATGAAGC
59.851
42.308
0.00
0.00
35.14
3.86
251
260
6.149142
GTCCTGATGATCTTAATGATGAAGCC
59.851
42.308
0.00
0.00
35.14
4.35
252
261
6.044054
TCCTGATGATCTTAATGATGAAGCCT
59.956
38.462
0.00
0.00
35.14
4.58
253
262
6.372103
CCTGATGATCTTAATGATGAAGCCTC
59.628
42.308
0.00
0.00
35.14
4.70
254
263
5.930569
TGATGATCTTAATGATGAAGCCTCG
59.069
40.000
0.00
0.00
35.14
4.63
255
264
5.282055
TGATCTTAATGATGAAGCCTCGT
57.718
39.130
0.00
0.00
35.14
4.18
256
265
5.052481
TGATCTTAATGATGAAGCCTCGTG
58.948
41.667
0.00
0.00
35.14
4.35
257
266
4.471904
TCTTAATGATGAAGCCTCGTGT
57.528
40.909
0.00
0.00
0.00
4.49
300
309
0.179073
CAGAGCCGTTACTCCATGGG
60.179
60.000
13.02
5.22
37.39
4.00
345
354
0.824595
TTCGGGTGTCGTCTCTCCAA
60.825
55.000
0.00
0.00
40.32
3.53
411
426
0.322098
CCCAGGTACCGACAATGCAA
60.322
55.000
6.18
0.00
0.00
4.08
566
617
1.876714
CGCAGGTACGGTTCCGATG
60.877
63.158
18.28
11.06
0.00
3.84
596
647
3.258872
TGCACAAATTGGCTTAGCTGAAT
59.741
39.130
3.59
0.16
0.00
2.57
604
656
4.637483
TGGCTTAGCTGAATTATTGTGC
57.363
40.909
3.59
0.00
0.00
4.57
906
963
7.639945
AGTTTTTGTGAACTGTGACTATTAGC
58.360
34.615
0.00
0.00
38.39
3.09
907
964
7.499232
AGTTTTTGTGAACTGTGACTATTAGCT
59.501
33.333
0.00
0.00
38.39
3.32
908
965
8.770828
GTTTTTGTGAACTGTGACTATTAGCTA
58.229
33.333
0.00
0.00
0.00
3.32
909
966
8.534333
TTTTGTGAACTGTGACTATTAGCTAG
57.466
34.615
0.00
0.00
0.00
3.42
942
1008
5.592104
TTTCTTGAGAAAGGGGTGTTTTC
57.408
39.130
2.16
0.00
38.94
2.29
1384
1452
1.270358
GGAGGAACGTGTTCAAGCTCT
60.270
52.381
14.16
2.16
41.20
4.09
1839
2085
1.692519
GGCGATACACCTACCCAGAAT
59.307
52.381
0.00
0.00
0.00
2.40
2092
2378
1.479709
ATCTCTCTTCGTCACCCTGG
58.520
55.000
0.00
0.00
0.00
4.45
2304
2590
0.392461
GGACACGCTTAATCCTGGCA
60.392
55.000
0.00
0.00
0.00
4.92
2777
3516
0.175302
CTCTGCGAGATGGAGCTTGT
59.825
55.000
0.00
0.00
35.70
3.16
2949
3688
3.305608
CCAAGTCAAGTGAGAATTTGCCC
60.306
47.826
0.00
0.00
0.00
5.36
3134
3873
6.070824
TGTGATTCATTAGAGAGCAGGTACAA
60.071
38.462
0.00
0.00
0.00
2.41
3138
3877
7.672983
TTCATTAGAGAGCAGGTACAAAAAG
57.327
36.000
0.00
0.00
0.00
2.27
3237
3979
2.489722
GGAACTGCTCAATCTTCCAACC
59.510
50.000
0.00
0.00
33.60
3.77
3303
4051
2.013400
CTTATACACATTGCGCCCACA
58.987
47.619
4.18
0.00
0.00
4.17
3354
4102
3.491766
TCTGGAGGGGAGTTCATAACT
57.508
47.619
0.00
0.00
46.38
2.24
3452
4215
4.122776
CCTCAGAATAATGGTGTCGGAAG
58.877
47.826
0.00
0.00
0.00
3.46
3611
4380
5.930837
AGAATGGAGGAAACAGAGAGTAG
57.069
43.478
0.00
0.00
0.00
2.57
4031
4826
5.589050
GCTAAGGGTTAAAGTGGTTAGGATG
59.411
44.000
0.00
0.00
0.00
3.51
4117
4912
9.658799
CGAGTTTGATTGATAGGATATGGTATT
57.341
33.333
0.00
0.00
0.00
1.89
4189
4984
9.479549
AATCCGGCATTTTAATTATGGATATCT
57.520
29.630
0.00
0.00
34.02
1.98
4227
5022
9.989869
GAAATTTGAAGTACTAAGTAGCAATCC
57.010
33.333
0.00
0.00
0.00
3.01
4228
5023
9.515226
AAATTTGAAGTACTAAGTAGCAATCCA
57.485
29.630
0.00
0.00
0.00
3.41
4321
5116
8.730680
ACCTTGTAATGCTTTATGTGTTCTTAG
58.269
33.333
0.00
0.00
0.00
2.18
4401
5196
8.954950
AGCATTTATATATTCCTCATTCCTCG
57.045
34.615
0.00
0.00
0.00
4.63
4421
5216
4.062293
TCGTCCAGTTTCCAATGTTAGTG
58.938
43.478
0.00
0.00
0.00
2.74
4441
5236
5.063880
AGTGTGTTCTAAGGATTTGTGGTC
58.936
41.667
0.00
0.00
0.00
4.02
4445
5240
3.604875
TCTAAGGATTTGTGGTCGGAC
57.395
47.619
0.00
0.00
0.00
4.79
4449
5244
1.495951
GATTTGTGGTCGGACGTGC
59.504
57.895
0.00
0.00
0.00
5.34
4450
5245
1.225376
GATTTGTGGTCGGACGTGCA
61.225
55.000
8.11
0.00
0.00
4.57
4451
5246
1.503818
ATTTGTGGTCGGACGTGCAC
61.504
55.000
6.82
6.82
0.00
4.57
4452
5247
2.581208
TTTGTGGTCGGACGTGCACT
62.581
55.000
16.19
1.46
0.00
4.40
4453
5248
1.736365
TTGTGGTCGGACGTGCACTA
61.736
55.000
16.19
0.00
0.00
2.74
4454
5249
1.443872
GTGGTCGGACGTGCACTAG
60.444
63.158
16.19
2.33
0.00
2.57
4455
5250
1.900016
TGGTCGGACGTGCACTAGT
60.900
57.895
16.19
6.14
0.00
2.57
4456
5251
0.606130
TGGTCGGACGTGCACTAGTA
60.606
55.000
16.19
0.00
0.00
1.82
4457
5252
0.179179
GGTCGGACGTGCACTAGTAC
60.179
60.000
16.19
6.14
0.00
2.73
4458
5253
0.518636
GTCGGACGTGCACTAGTACA
59.481
55.000
16.19
0.00
0.00
2.90
4459
5254
1.069022
GTCGGACGTGCACTAGTACAA
60.069
52.381
16.19
0.00
0.00
2.41
4460
5255
1.608109
TCGGACGTGCACTAGTACAAA
59.392
47.619
16.19
0.00
0.00
2.83
4461
5256
2.034432
TCGGACGTGCACTAGTACAAAA
59.966
45.455
16.19
0.00
0.00
2.44
4462
5257
2.154389
CGGACGTGCACTAGTACAAAAC
59.846
50.000
16.19
0.00
0.00
2.43
4463
5258
3.125316
GGACGTGCACTAGTACAAAACA
58.875
45.455
16.19
0.00
0.00
2.83
4464
5259
3.556775
GGACGTGCACTAGTACAAAACAA
59.443
43.478
16.19
0.00
0.00
2.83
4465
5260
4.318546
GGACGTGCACTAGTACAAAACAAG
60.319
45.833
16.19
0.00
0.00
3.16
4466
5261
3.558418
ACGTGCACTAGTACAAAACAAGG
59.442
43.478
16.19
0.00
0.00
3.61
4467
5262
3.606153
CGTGCACTAGTACAAAACAAGGC
60.606
47.826
16.19
0.00
0.00
4.35
4468
5263
3.564225
GTGCACTAGTACAAAACAAGGCT
59.436
43.478
10.32
0.00
0.00
4.58
4469
5264
4.036380
GTGCACTAGTACAAAACAAGGCTT
59.964
41.667
10.32
0.00
0.00
4.35
4470
5265
4.642885
TGCACTAGTACAAAACAAGGCTTT
59.357
37.500
0.00
0.00
0.00
3.51
4471
5266
5.212934
GCACTAGTACAAAACAAGGCTTTC
58.787
41.667
0.00
0.00
0.00
2.62
4472
5267
5.220970
GCACTAGTACAAAACAAGGCTTTCA
60.221
40.000
0.00
0.00
0.00
2.69
4473
5268
6.515035
GCACTAGTACAAAACAAGGCTTTCAT
60.515
38.462
0.00
0.00
0.00
2.57
4474
5269
7.078228
CACTAGTACAAAACAAGGCTTTCATC
58.922
38.462
0.00
0.00
0.00
2.92
4475
5270
6.770785
ACTAGTACAAAACAAGGCTTTCATCA
59.229
34.615
0.00
0.00
0.00
3.07
4476
5271
5.831997
AGTACAAAACAAGGCTTTCATCAC
58.168
37.500
0.00
0.00
0.00
3.06
4477
5272
4.734398
ACAAAACAAGGCTTTCATCACA
57.266
36.364
0.00
0.00
0.00
3.58
4478
5273
4.685924
ACAAAACAAGGCTTTCATCACAG
58.314
39.130
0.00
0.00
0.00
3.66
4479
5274
4.053295
CAAAACAAGGCTTTCATCACAGG
58.947
43.478
0.00
0.00
0.00
4.00
4480
5275
1.915141
ACAAGGCTTTCATCACAGGG
58.085
50.000
0.00
0.00
0.00
4.45
4481
5276
0.529378
CAAGGCTTTCATCACAGGGC
59.471
55.000
0.00
0.00
0.00
5.19
4482
5277
0.112995
AAGGCTTTCATCACAGGGCA
59.887
50.000
0.00
0.00
0.00
5.36
4483
5278
0.112995
AGGCTTTCATCACAGGGCAA
59.887
50.000
0.00
0.00
0.00
4.52
4484
5279
1.188863
GGCTTTCATCACAGGGCAAT
58.811
50.000
0.00
0.00
0.00
3.56
4485
5280
2.025037
AGGCTTTCATCACAGGGCAATA
60.025
45.455
0.00
0.00
0.00
1.90
4486
5281
2.961062
GGCTTTCATCACAGGGCAATAT
59.039
45.455
0.00
0.00
0.00
1.28
4487
5282
3.385755
GGCTTTCATCACAGGGCAATATT
59.614
43.478
0.00
0.00
0.00
1.28
4488
5283
4.500375
GGCTTTCATCACAGGGCAATATTC
60.500
45.833
0.00
0.00
0.00
1.75
4489
5284
4.098349
GCTTTCATCACAGGGCAATATTCA
59.902
41.667
0.00
0.00
0.00
2.57
4490
5285
5.581126
TTTCATCACAGGGCAATATTCAC
57.419
39.130
0.00
0.00
0.00
3.18
4491
5286
4.233632
TCATCACAGGGCAATATTCACA
57.766
40.909
0.00
0.00
0.00
3.58
4492
5287
4.795469
TCATCACAGGGCAATATTCACAT
58.205
39.130
0.00
0.00
0.00
3.21
4493
5288
5.202765
TCATCACAGGGCAATATTCACATT
58.797
37.500
0.00
0.00
0.00
2.71
4494
5289
6.363882
TCATCACAGGGCAATATTCACATTA
58.636
36.000
0.00
0.00
0.00
1.90
4495
5290
6.487668
TCATCACAGGGCAATATTCACATTAG
59.512
38.462
0.00
0.00
0.00
1.73
4496
5291
5.754782
TCACAGGGCAATATTCACATTAGT
58.245
37.500
0.00
0.00
0.00
2.24
4497
5292
5.822519
TCACAGGGCAATATTCACATTAGTC
59.177
40.000
0.00
0.00
0.00
2.59
4498
5293
5.009010
CACAGGGCAATATTCACATTAGTCC
59.991
44.000
0.00
0.00
0.00
3.85
4499
5294
4.520492
CAGGGCAATATTCACATTAGTCCC
59.480
45.833
0.00
0.00
0.00
4.46
4500
5295
3.502211
GGGCAATATTCACATTAGTCCCG
59.498
47.826
0.00
0.00
0.00
5.14
4501
5296
3.502211
GGCAATATTCACATTAGTCCCGG
59.498
47.826
0.00
0.00
0.00
5.73
4502
5297
4.134563
GCAATATTCACATTAGTCCCGGT
58.865
43.478
0.00
0.00
0.00
5.28
4503
5298
4.578928
GCAATATTCACATTAGTCCCGGTT
59.421
41.667
0.00
0.00
0.00
4.44
4504
5299
5.277828
GCAATATTCACATTAGTCCCGGTTC
60.278
44.000
0.00
0.00
0.00
3.62
4505
5300
3.992943
ATTCACATTAGTCCCGGTTCA
57.007
42.857
0.00
0.00
0.00
3.18
4506
5301
3.328382
TTCACATTAGTCCCGGTTCAG
57.672
47.619
0.00
0.00
0.00
3.02
4507
5302
2.253610
TCACATTAGTCCCGGTTCAGT
58.746
47.619
0.00
0.00
0.00
3.41
4508
5303
2.232941
TCACATTAGTCCCGGTTCAGTC
59.767
50.000
0.00
0.00
0.00
3.51
4509
5304
2.028476
CACATTAGTCCCGGTTCAGTCA
60.028
50.000
0.00
0.00
0.00
3.41
4510
5305
2.028385
ACATTAGTCCCGGTTCAGTCAC
60.028
50.000
0.00
0.00
0.00
3.67
4511
5306
0.599558
TTAGTCCCGGTTCAGTCACG
59.400
55.000
0.00
0.00
0.00
4.35
4512
5307
0.250858
TAGTCCCGGTTCAGTCACGA
60.251
55.000
0.00
0.00
0.00
4.35
4513
5308
1.111116
AGTCCCGGTTCAGTCACGAA
61.111
55.000
0.00
0.00
0.00
3.85
4514
5309
0.942884
GTCCCGGTTCAGTCACGAAC
60.943
60.000
0.00
4.51
43.75
3.95
4518
5313
3.946907
GTTCAGTCACGAACCGGG
58.053
61.111
6.32
0.00
39.52
5.73
4519
5314
1.364901
GTTCAGTCACGAACCGGGA
59.635
57.895
6.32
0.00
39.52
5.14
4526
5321
1.259609
TCACGAACCGGGACTAATGT
58.740
50.000
6.32
0.00
32.99
2.71
4527
5322
1.067425
TCACGAACCGGGACTAATGTG
60.067
52.381
6.32
4.66
32.99
3.21
4528
5323
1.067425
CACGAACCGGGACTAATGTGA
60.067
52.381
6.32
0.00
28.17
3.58
4529
5324
1.203994
ACGAACCGGGACTAATGTGAG
59.796
52.381
6.32
0.00
0.00
3.51
4530
5325
1.653151
GAACCGGGACTAATGTGAGC
58.347
55.000
6.32
0.00
0.00
4.26
4531
5326
0.981183
AACCGGGACTAATGTGAGCA
59.019
50.000
6.32
0.00
0.00
4.26
4532
5327
1.204146
ACCGGGACTAATGTGAGCAT
58.796
50.000
6.32
0.00
36.80
3.79
4533
5328
1.559682
ACCGGGACTAATGTGAGCATT
59.440
47.619
6.32
0.00
46.14
3.56
4534
5329
1.942657
CCGGGACTAATGTGAGCATTG
59.057
52.381
0.00
0.00
44.32
2.82
4535
5330
1.942657
CGGGACTAATGTGAGCATTGG
59.057
52.381
3.39
3.10
44.32
3.16
4540
5335
1.942657
CTAATGTGAGCATTGGTCCCG
59.057
52.381
12.99
0.00
44.32
5.14
4541
5336
0.327924
AATGTGAGCATTGGTCCCGA
59.672
50.000
12.99
0.00
43.12
5.14
4542
5337
0.548031
ATGTGAGCATTGGTCCCGAT
59.452
50.000
12.99
0.34
29.54
4.18
4543
5338
0.327924
TGTGAGCATTGGTCCCGATT
59.672
50.000
12.99
0.00
0.00
3.34
4544
5339
1.017387
GTGAGCATTGGTCCCGATTC
58.983
55.000
12.99
0.00
0.00
2.52
4545
5340
0.461870
TGAGCATTGGTCCCGATTCG
60.462
55.000
12.99
0.00
0.00
3.34
4546
5341
0.462047
GAGCATTGGTCCCGATTCGT
60.462
55.000
4.48
0.00
0.00
3.85
4547
5342
0.744414
AGCATTGGTCCCGATTCGTG
60.744
55.000
5.20
0.00
0.00
4.35
4548
5343
1.721487
CATTGGTCCCGATTCGTGC
59.279
57.895
5.20
0.00
0.00
5.34
4549
5344
1.813753
ATTGGTCCCGATTCGTGCG
60.814
57.895
5.20
0.00
0.00
5.34
4555
5350
3.309675
CCGATTCGTGCGGCTAAG
58.690
61.111
5.20
0.00
42.55
2.18
4556
5351
2.237751
CCGATTCGTGCGGCTAAGG
61.238
63.158
5.20
0.00
42.55
2.69
4557
5352
2.871427
CGATTCGTGCGGCTAAGGC
61.871
63.158
0.00
0.00
37.82
4.35
4558
5353
1.813753
GATTCGTGCGGCTAAGGCA
60.814
57.895
0.00
0.00
40.87
4.75
4559
5354
1.153168
ATTCGTGCGGCTAAGGCAT
60.153
52.632
0.00
0.00
43.19
4.40
4560
5355
0.748005
ATTCGTGCGGCTAAGGCATT
60.748
50.000
0.00
0.00
43.19
3.56
4561
5356
0.108089
TTCGTGCGGCTAAGGCATTA
60.108
50.000
0.00
0.00
43.19
1.90
4562
5357
0.529773
TCGTGCGGCTAAGGCATTAG
60.530
55.000
13.70
13.70
43.19
1.73
4563
5358
0.810031
CGTGCGGCTAAGGCATTAGT
60.810
55.000
18.55
0.00
43.19
2.24
4564
5359
0.938008
GTGCGGCTAAGGCATTAGTC
59.062
55.000
18.55
15.72
43.19
2.59
4565
5360
0.179056
TGCGGCTAAGGCATTAGTCC
60.179
55.000
16.40
16.54
39.96
3.85
4566
5361
0.885150
GCGGCTAAGGCATTAGTCCC
60.885
60.000
16.40
10.33
39.96
4.46
4567
5362
0.600255
CGGCTAAGGCATTAGTCCCG
60.600
60.000
16.40
17.46
39.96
5.14
4568
5363
0.250338
GGCTAAGGCATTAGTCCCGG
60.250
60.000
18.55
0.00
40.55
5.73
4569
5364
0.468648
GCTAAGGCATTAGTCCCGGT
59.531
55.000
18.55
0.00
40.55
5.28
4570
5365
1.134189
GCTAAGGCATTAGTCCCGGTT
60.134
52.381
18.55
0.00
40.55
4.44
4571
5366
2.835027
CTAAGGCATTAGTCCCGGTTC
58.165
52.381
9.96
0.00
34.77
3.62
4572
5367
0.988832
AAGGCATTAGTCCCGGTTCA
59.011
50.000
0.00
0.00
0.00
3.18
4573
5368
0.252197
AGGCATTAGTCCCGGTTCAC
59.748
55.000
0.00
0.00
0.00
3.18
4574
5369
0.746923
GGCATTAGTCCCGGTTCACC
60.747
60.000
0.00
0.00
0.00
4.02
4575
5370
0.252197
GCATTAGTCCCGGTTCACCT
59.748
55.000
0.00
0.00
0.00
4.00
4576
5371
2.012051
GCATTAGTCCCGGTTCACCTG
61.012
57.143
0.00
0.00
0.00
4.00
4577
5372
0.909623
ATTAGTCCCGGTTCACCTGG
59.090
55.000
0.00
0.00
41.25
4.45
4578
5373
1.196104
TTAGTCCCGGTTCACCTGGG
61.196
60.000
15.89
15.89
45.27
4.45
4579
5374
4.717313
GTCCCGGTTCACCTGGGC
62.717
72.222
16.78
7.94
44.29
5.36
4583
5378
3.966543
CGGTTCACCTGGGCCCTT
61.967
66.667
25.70
3.96
0.00
3.95
4584
5379
2.526110
GGTTCACCTGGGCCCTTT
59.474
61.111
25.70
3.52
0.00
3.11
4585
5380
1.771646
GGTTCACCTGGGCCCTTTA
59.228
57.895
25.70
0.48
0.00
1.85
4586
5381
0.323451
GGTTCACCTGGGCCCTTTAG
60.323
60.000
25.70
12.48
0.00
1.85
4587
5382
0.404426
GTTCACCTGGGCCCTTTAGT
59.596
55.000
25.70
12.09
0.00
2.24
4588
5383
0.696501
TTCACCTGGGCCCTTTAGTC
59.303
55.000
25.70
0.00
0.00
2.59
4589
5384
1.205460
TCACCTGGGCCCTTTAGTCC
61.205
60.000
25.70
0.00
0.00
3.85
4590
5385
1.929088
ACCTGGGCCCTTTAGTCCC
60.929
63.158
25.70
0.00
40.47
4.46
4592
5387
3.835134
TGGGCCCTTTAGTCCCAG
58.165
61.111
25.70
0.00
44.62
4.45
4593
5388
1.151677
TGGGCCCTTTAGTCCCAGT
60.152
57.895
25.70
0.00
44.62
4.00
4594
5389
0.774491
TGGGCCCTTTAGTCCCAGTT
60.774
55.000
25.70
0.00
44.62
3.16
4595
5390
0.323451
GGGCCCTTTAGTCCCAGTTG
60.323
60.000
17.04
0.00
39.82
3.16
4596
5391
0.323451
GGCCCTTTAGTCCCAGTTGG
60.323
60.000
0.00
0.00
0.00
3.77
4597
5392
0.404426
GCCCTTTAGTCCCAGTTGGT
59.596
55.000
0.00
0.00
34.77
3.67
4598
5393
1.886655
GCCCTTTAGTCCCAGTTGGTG
60.887
57.143
0.00
0.00
34.77
4.17
4599
5394
1.534729
CCTTTAGTCCCAGTTGGTGC
58.465
55.000
0.00
0.00
34.77
5.01
4600
5395
1.534729
CTTTAGTCCCAGTTGGTGCC
58.465
55.000
0.00
0.00
34.77
5.01
4601
5396
0.847373
TTTAGTCCCAGTTGGTGCCA
59.153
50.000
0.00
0.00
34.77
4.92
4602
5397
0.109723
TTAGTCCCAGTTGGTGCCAC
59.890
55.000
0.00
0.00
34.77
5.01
4603
5398
2.107041
TAGTCCCAGTTGGTGCCACG
62.107
60.000
0.00
0.00
34.77
4.94
4604
5399
3.164977
TCCCAGTTGGTGCCACGA
61.165
61.111
0.00
0.00
34.77
4.35
4605
5400
2.203280
CCCAGTTGGTGCCACGAA
60.203
61.111
0.00
0.00
0.00
3.85
4606
5401
2.551912
CCCAGTTGGTGCCACGAAC
61.552
63.158
14.04
14.04
37.12
3.95
4607
5402
2.551912
CCAGTTGGTGCCACGAACC
61.552
63.158
17.57
0.00
37.50
3.62
4608
5403
2.590575
AGTTGGTGCCACGAACCG
60.591
61.111
17.57
0.00
37.50
4.44
4609
5404
3.656045
GTTGGTGCCACGAACCGG
61.656
66.667
11.21
0.00
40.86
5.28
4610
5405
4.939368
TTGGTGCCACGAACCGGG
62.939
66.667
6.32
0.00
40.86
5.73
4613
5408
4.309950
GTGCCACGAACCGGGACT
62.310
66.667
6.32
0.00
41.35
3.85
4614
5409
2.601067
TGCCACGAACCGGGACTA
60.601
61.111
6.32
0.00
28.17
2.59
4615
5410
2.208619
TGCCACGAACCGGGACTAA
61.209
57.895
6.32
0.00
28.17
2.24
4616
5411
1.004679
GCCACGAACCGGGACTAAA
60.005
57.895
6.32
0.00
28.17
1.85
4617
5412
1.017701
GCCACGAACCGGGACTAAAG
61.018
60.000
6.32
0.00
28.17
1.85
4618
5413
0.390735
CCACGAACCGGGACTAAAGG
60.391
60.000
6.32
0.00
28.17
3.11
4619
5414
0.390735
CACGAACCGGGACTAAAGGG
60.391
60.000
6.32
0.00
28.17
3.95
4620
5415
0.833409
ACGAACCGGGACTAAAGGGT
60.833
55.000
6.32
0.00
0.00
4.34
4621
5416
0.390735
CGAACCGGGACTAAAGGGTG
60.391
60.000
6.32
0.00
31.96
4.61
4622
5417
0.675837
GAACCGGGACTAAAGGGTGC
60.676
60.000
6.32
0.00
31.96
5.01
4623
5418
2.125269
CCGGGACTAAAGGGTGCG
60.125
66.667
0.00
0.00
0.00
5.34
4624
5419
2.652095
CCGGGACTAAAGGGTGCGA
61.652
63.158
0.00
0.00
0.00
5.10
4625
5420
1.520666
CGGGACTAAAGGGTGCGAT
59.479
57.895
0.00
0.00
0.00
4.58
4626
5421
0.810031
CGGGACTAAAGGGTGCGATG
60.810
60.000
0.00
0.00
0.00
3.84
4627
5422
1.095807
GGGACTAAAGGGTGCGATGC
61.096
60.000
0.00
0.00
0.00
3.91
4628
5423
1.095807
GGACTAAAGGGTGCGATGCC
61.096
60.000
0.00
0.00
0.00
4.40
4629
5424
1.077716
ACTAAAGGGTGCGATGCCC
60.078
57.895
1.67
1.67
46.43
5.36
4634
5429
3.749981
GGGTGCGATGCCCATTAG
58.250
61.111
4.76
0.00
45.40
1.73
4635
5430
1.152963
GGGTGCGATGCCCATTAGT
60.153
57.895
4.76
0.00
45.40
2.24
4636
5431
1.166531
GGGTGCGATGCCCATTAGTC
61.167
60.000
4.76
0.00
45.40
2.59
4637
5432
1.166531
GGTGCGATGCCCATTAGTCC
61.167
60.000
0.00
0.00
0.00
3.85
4638
5433
1.148273
TGCGATGCCCATTAGTCCC
59.852
57.895
0.00
0.00
0.00
4.46
4639
5434
1.961277
GCGATGCCCATTAGTCCCG
60.961
63.158
0.00
0.00
0.00
5.14
4640
5435
1.301716
CGATGCCCATTAGTCCCGG
60.302
63.158
0.00
0.00
0.00
5.73
4641
5436
1.837090
GATGCCCATTAGTCCCGGT
59.163
57.895
0.00
0.00
0.00
5.28
4642
5437
0.182775
GATGCCCATTAGTCCCGGTT
59.817
55.000
0.00
0.00
0.00
4.44
4643
5438
0.106719
ATGCCCATTAGTCCCGGTTG
60.107
55.000
0.00
0.00
0.00
3.77
4644
5439
1.453197
GCCCATTAGTCCCGGTTGG
60.453
63.158
0.00
0.00
0.00
3.77
4645
5440
1.996086
CCCATTAGTCCCGGTTGGT
59.004
57.895
0.00
0.00
34.77
3.67
4646
5441
0.393808
CCCATTAGTCCCGGTTGGTG
60.394
60.000
0.00
0.00
34.77
4.17
4647
5442
0.393808
CCATTAGTCCCGGTTGGTGG
60.394
60.000
0.00
0.00
34.77
4.61
4648
5443
1.029947
CATTAGTCCCGGTTGGTGGC
61.030
60.000
0.00
0.00
34.77
5.01
4649
5444
1.493854
ATTAGTCCCGGTTGGTGGCA
61.494
55.000
0.00
0.00
34.77
4.92
4650
5445
2.400269
TTAGTCCCGGTTGGTGGCAC
62.400
60.000
9.70
9.70
34.77
5.01
4661
5456
4.265056
GTGGCACCAACCGGGACT
62.265
66.667
6.32
0.00
41.15
3.85
4662
5457
2.527123
TGGCACCAACCGGGACTA
60.527
61.111
6.32
0.00
41.15
2.59
4663
5458
2.148052
TGGCACCAACCGGGACTAA
61.148
57.895
6.32
0.00
41.15
2.24
4664
5459
1.073548
GGCACCAACCGGGACTAAA
59.926
57.895
6.32
0.00
41.15
1.85
4665
5460
0.958876
GGCACCAACCGGGACTAAAG
60.959
60.000
6.32
0.00
41.15
1.85
4666
5461
0.958876
GCACCAACCGGGACTAAAGG
60.959
60.000
6.32
0.00
41.15
3.11
4667
5462
0.399075
CACCAACCGGGACTAAAGGT
59.601
55.000
6.32
0.00
41.15
3.50
4669
5464
2.038820
CACCAACCGGGACTAAAGGTTA
59.961
50.000
6.32
0.00
45.52
2.85
4670
5465
2.303890
ACCAACCGGGACTAAAGGTTAG
59.696
50.000
6.32
0.00
45.52
2.34
4671
5466
2.303890
CCAACCGGGACTAAAGGTTAGT
59.696
50.000
6.32
0.32
45.52
2.24
4672
5467
3.593096
CAACCGGGACTAAAGGTTAGTC
58.407
50.000
16.44
16.44
45.52
2.59
4684
5479
2.464782
AGGTTAGTCCTTTAGTCCCGG
58.535
52.381
0.00
0.00
45.67
5.73
4685
5480
2.182827
GGTTAGTCCTTTAGTCCCGGT
58.817
52.381
0.00
0.00
0.00
5.28
4686
5481
2.568956
GGTTAGTCCTTTAGTCCCGGTT
59.431
50.000
0.00
0.00
0.00
4.44
4687
5482
3.593096
GTTAGTCCTTTAGTCCCGGTTG
58.407
50.000
0.00
0.00
0.00
3.77
4688
5483
2.019807
AGTCCTTTAGTCCCGGTTGA
57.980
50.000
0.00
0.00
0.00
3.18
4689
5484
2.547990
AGTCCTTTAGTCCCGGTTGAT
58.452
47.619
0.00
0.00
0.00
2.57
4690
5485
2.236395
AGTCCTTTAGTCCCGGTTGATG
59.764
50.000
0.00
0.00
0.00
3.07
4691
5486
1.065709
TCCTTTAGTCCCGGTTGATGC
60.066
52.381
0.00
0.00
0.00
3.91
4692
5487
1.379527
CTTTAGTCCCGGTTGATGCC
58.620
55.000
0.00
0.00
0.00
4.40
4693
5488
0.693622
TTTAGTCCCGGTTGATGCCA
59.306
50.000
0.00
0.00
0.00
4.92
4694
5489
0.035820
TTAGTCCCGGTTGATGCCAC
60.036
55.000
0.00
0.00
0.00
5.01
4695
5490
1.906105
TAGTCCCGGTTGATGCCACC
61.906
60.000
0.00
0.00
0.00
4.61
4696
5491
3.253061
TCCCGGTTGATGCCACCA
61.253
61.111
0.00
0.00
0.00
4.17
4697
5492
2.282816
CCCGGTTGATGCCACCAA
60.283
61.111
0.00
0.00
0.00
3.67
4698
5493
2.635443
CCCGGTTGATGCCACCAAC
61.635
63.158
0.00
0.00
42.18
3.77
4699
5494
1.603455
CCGGTTGATGCCACCAACT
60.603
57.895
1.19
0.00
42.45
3.16
4700
5495
1.580942
CGGTTGATGCCACCAACTG
59.419
57.895
1.19
0.00
42.45
3.16
4701
5496
1.865788
CGGTTGATGCCACCAACTGG
61.866
60.000
2.53
0.00
43.54
4.00
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
29
30
6.663093
AGCACACAACCATCTTTATCCAATTA
59.337
34.615
0.00
0.00
0.00
1.40
35
36
4.651994
CGAAGCACACAACCATCTTTATC
58.348
43.478
0.00
0.00
0.00
1.75
61
62
0.759346
ATTACCCCGGTCTCTGCATC
59.241
55.000
0.00
0.00
0.00
3.91
67
68
1.790818
AAGAGGATTACCCCGGTCTC
58.209
55.000
0.00
0.00
36.73
3.36
102
103
1.067495
TGCACGTCGGTACATCATCAA
60.067
47.619
0.00
0.00
0.00
2.57
128
129
1.639298
GCGTGTCTGACAAGGCATCC
61.639
60.000
21.99
4.39
40.95
3.51
154
155
3.307339
GCCTTGTGGACTGAAGAAGATCT
60.307
47.826
0.00
0.00
34.57
2.75
163
164
0.257328
TTTGTGGCCTTGTGGACTGA
59.743
50.000
3.32
0.00
43.49
3.41
164
165
0.670162
CTTTGTGGCCTTGTGGACTG
59.330
55.000
3.32
0.00
43.49
3.51
167
176
2.969821
ATACTTTGTGGCCTTGTGGA
57.030
45.000
3.32
0.00
34.57
4.02
175
184
6.816640
TCGATAGGCAATATATACTTTGTGGC
59.183
38.462
0.00
0.00
0.00
5.01
204
213
2.094803
CACTAGCCAGAGCATATCCTCG
60.095
54.545
0.00
0.00
43.56
4.63
207
216
1.974236
ACCACTAGCCAGAGCATATCC
59.026
52.381
0.00
0.00
43.56
2.59
209
218
1.974236
GGACCACTAGCCAGAGCATAT
59.026
52.381
0.00
0.00
43.56
1.78
210
219
1.062886
AGGACCACTAGCCAGAGCATA
60.063
52.381
0.00
0.00
43.56
3.14
211
220
0.326048
AGGACCACTAGCCAGAGCAT
60.326
55.000
0.00
0.00
43.56
3.79
212
221
1.079256
AGGACCACTAGCCAGAGCA
59.921
57.895
0.00
0.00
43.56
4.26
213
222
0.972983
TCAGGACCACTAGCCAGAGC
60.973
60.000
0.00
0.00
40.32
4.09
214
223
1.411977
CATCAGGACCACTAGCCAGAG
59.588
57.143
0.00
0.00
0.00
3.35
215
224
1.007118
TCATCAGGACCACTAGCCAGA
59.993
52.381
0.00
0.00
0.00
3.86
216
225
1.489481
TCATCAGGACCACTAGCCAG
58.511
55.000
0.00
0.00
0.00
4.85
217
226
2.042464
GATCATCAGGACCACTAGCCA
58.958
52.381
0.00
0.00
0.00
4.75
218
227
2.324541
AGATCATCAGGACCACTAGCC
58.675
52.381
0.00
0.00
0.00
3.93
219
228
5.537300
TTAAGATCATCAGGACCACTAGC
57.463
43.478
0.00
0.00
0.00
3.42
220
229
7.295322
TCATTAAGATCATCAGGACCACTAG
57.705
40.000
0.00
0.00
0.00
2.57
221
230
7.510343
TCATCATTAAGATCATCAGGACCACTA
59.490
37.037
0.00
0.00
33.72
2.74
222
231
6.328410
TCATCATTAAGATCATCAGGACCACT
59.672
38.462
0.00
0.00
33.72
4.00
223
232
6.528321
TCATCATTAAGATCATCAGGACCAC
58.472
40.000
0.00
0.00
33.72
4.16
224
233
6.752285
TCATCATTAAGATCATCAGGACCA
57.248
37.500
0.00
0.00
33.72
4.02
225
234
6.149142
GCTTCATCATTAAGATCATCAGGACC
59.851
42.308
0.00
0.00
33.72
4.46
226
235
6.149142
GGCTTCATCATTAAGATCATCAGGAC
59.851
42.308
0.00
0.00
33.72
3.85
227
236
6.044054
AGGCTTCATCATTAAGATCATCAGGA
59.956
38.462
0.00
0.00
33.72
3.86
228
237
6.239396
AGGCTTCATCATTAAGATCATCAGG
58.761
40.000
0.00
0.00
33.72
3.86
229
238
6.091034
CGAGGCTTCATCATTAAGATCATCAG
59.909
42.308
0.00
0.00
33.72
2.90
230
239
5.930569
CGAGGCTTCATCATTAAGATCATCA
59.069
40.000
0.00
0.00
33.72
3.07
231
240
5.931146
ACGAGGCTTCATCATTAAGATCATC
59.069
40.000
0.00
0.00
33.72
2.92
232
241
5.699915
CACGAGGCTTCATCATTAAGATCAT
59.300
40.000
0.00
0.00
33.72
2.45
233
242
5.052481
CACGAGGCTTCATCATTAAGATCA
58.948
41.667
0.00
0.00
33.72
2.92
234
243
5.050499
CACACGAGGCTTCATCATTAAGATC
60.050
44.000
0.00
0.00
33.72
2.75
235
244
4.813161
CACACGAGGCTTCATCATTAAGAT
59.187
41.667
0.00
0.00
37.48
2.40
236
245
4.183865
CACACGAGGCTTCATCATTAAGA
58.816
43.478
0.00
0.00
0.00
2.10
237
246
3.242543
GCACACGAGGCTTCATCATTAAG
60.243
47.826
0.00
0.00
0.00
1.85
238
247
2.677836
GCACACGAGGCTTCATCATTAA
59.322
45.455
0.00
0.00
0.00
1.40
239
248
2.279741
GCACACGAGGCTTCATCATTA
58.720
47.619
0.00
0.00
0.00
1.90
240
249
1.089920
GCACACGAGGCTTCATCATT
58.910
50.000
0.00
0.00
0.00
2.57
241
250
0.036105
TGCACACGAGGCTTCATCAT
60.036
50.000
0.00
0.00
0.00
2.45
242
251
0.671472
CTGCACACGAGGCTTCATCA
60.671
55.000
0.00
0.00
0.00
3.07
243
252
0.390340
TCTGCACACGAGGCTTCATC
60.390
55.000
0.00
0.00
0.00
2.92
244
253
0.035317
TTCTGCACACGAGGCTTCAT
59.965
50.000
0.00
0.00
0.00
2.57
245
254
0.601046
CTTCTGCACACGAGGCTTCA
60.601
55.000
0.00
0.00
0.00
3.02
246
255
1.905922
GCTTCTGCACACGAGGCTTC
61.906
60.000
1.83
0.00
39.41
3.86
247
256
1.963338
GCTTCTGCACACGAGGCTT
60.963
57.895
1.83
0.00
39.41
4.35
248
257
2.358003
GCTTCTGCACACGAGGCT
60.358
61.111
1.83
0.00
39.41
4.58
249
258
2.666190
TGCTTCTGCACACGAGGC
60.666
61.111
2.06
2.06
45.31
4.70
250
259
0.390866
ATCTGCTTCTGCACACGAGG
60.391
55.000
0.00
0.00
45.31
4.63
251
260
0.720027
CATCTGCTTCTGCACACGAG
59.280
55.000
0.00
0.00
45.31
4.18
252
261
1.293963
GCATCTGCTTCTGCACACGA
61.294
55.000
0.00
0.00
45.31
4.35
253
262
1.134075
GCATCTGCTTCTGCACACG
59.866
57.895
0.00
0.00
45.31
4.49
300
309
6.722129
AGGTGAGATCTATGATAACTGGGTAC
59.278
42.308
0.00
0.00
0.00
3.34
345
354
0.326264
ACCAGCCTCGCTTCTTCAAT
59.674
50.000
0.00
0.00
36.40
2.57
411
426
7.118496
ACTATGTATGAAAGAGTAAGCAGCT
57.882
36.000
0.00
0.00
0.00
4.24
566
617
2.493278
AGCCAATTTGTGCATCCTGTAC
59.507
45.455
10.96
0.00
33.42
2.90
689
744
4.075682
TCCTTGCAATGTGATAAAACGGA
58.924
39.130
0.00
0.00
0.00
4.69
833
890
3.326880
TCTTAACCCTCCACCTGAACTTC
59.673
47.826
0.00
0.00
0.00
3.01
906
963
9.823098
CTTTCTCAAGAAAATCATCACAACTAG
57.177
33.333
6.64
0.00
42.72
2.57
907
964
8.786898
CCTTTCTCAAGAAAATCATCACAACTA
58.213
33.333
6.64
0.00
42.72
2.24
908
965
7.255730
CCCTTTCTCAAGAAAATCATCACAACT
60.256
37.037
6.64
0.00
42.72
3.16
909
966
6.865205
CCCTTTCTCAAGAAAATCATCACAAC
59.135
38.462
6.64
0.00
42.72
3.32
989
1057
2.191400
AGCTCACCATTCTCTTGGCTA
58.809
47.619
0.00
0.00
40.68
3.93
1384
1452
1.832719
TTCAGGAACGCCGATCCCAA
61.833
55.000
10.02
0.58
37.71
4.12
1839
2085
2.517127
AGGGAGATCCTTTAGGTCGGTA
59.483
50.000
0.00
0.00
45.47
4.02
1984
2270
1.424302
CTCCATGATCCTGAGGGCATT
59.576
52.381
0.00
0.00
0.00
3.56
2092
2378
2.119801
ATGGTCAGCATGGACAGAAC
57.880
50.000
0.00
0.00
39.59
3.01
2304
2590
3.453717
ACCTCATCTGCACATACTCACAT
59.546
43.478
0.00
0.00
0.00
3.21
2777
3516
0.097325
GTTGACGCCGTGTTTTGTCA
59.903
50.000
0.00
0.00
39.42
3.58
2949
3688
2.160822
ATGATTCCCGAAGCTCATCG
57.839
50.000
0.66
0.66
42.37
3.84
3134
3873
5.723295
TCTCTGCTTTGTTTTTCAGCTTTT
58.277
33.333
0.00
0.00
0.00
2.27
3138
3877
4.268644
GGTTTCTCTGCTTTGTTTTTCAGC
59.731
41.667
0.00
0.00
0.00
4.26
3237
3979
2.126463
TTCCAGCGAGCTTCGTCG
60.126
61.111
0.00
0.00
42.81
5.12
3354
4102
1.546923
CAAAGCAATGCCCAGATGTGA
59.453
47.619
0.00
0.00
0.00
3.58
3429
4192
3.371034
TCCGACACCATTATTCTGAGGA
58.629
45.455
0.00
0.00
0.00
3.71
3452
4215
5.163854
CCTGTCTCGTCCATATTGTTTTCAC
60.164
44.000
0.00
0.00
0.00
3.18
3611
4380
2.700897
TGATTCCCCTCCTCGATTTCTC
59.299
50.000
0.00
0.00
0.00
2.87
3759
4535
8.939929
CAGAACTTATGGTCGCATAATTCATAT
58.060
33.333
3.03
0.00
0.00
1.78
3831
4607
2.128771
ATGAACAAATCAGGTCCCCG
57.871
50.000
0.00
0.00
42.53
5.73
4031
4826
1.020861
AACGGTTACGGGCGGAAATC
61.021
55.000
0.00
0.00
46.48
2.17
4042
4837
5.163864
CCGTACCCAAATAGAAAACGGTTAC
60.164
44.000
2.97
0.00
42.50
2.50
4189
4984
9.308000
AGTACTTCAAATTTCACCCATTAATCA
57.692
29.630
0.00
0.00
0.00
2.57
4227
5022
9.692749
ATCTCATAAGCAAAAATAGCATTCATG
57.307
29.630
0.00
0.00
0.00
3.07
4228
5023
9.692749
CATCTCATAAGCAAAAATAGCATTCAT
57.307
29.630
0.00
0.00
0.00
2.57
4390
5185
2.622436
GAAACTGGACGAGGAATGAGG
58.378
52.381
0.00
0.00
0.00
3.86
4392
5187
1.974957
TGGAAACTGGACGAGGAATGA
59.025
47.619
0.00
0.00
0.00
2.57
4401
5196
4.578928
ACACACTAACATTGGAAACTGGAC
59.421
41.667
0.00
0.00
0.00
4.02
4421
5216
3.435671
CCGACCACAAATCCTTAGAACAC
59.564
47.826
0.00
0.00
0.00
3.32
4441
5236
2.054687
TTTGTACTAGTGCACGTCCG
57.945
50.000
13.67
3.74
0.00
4.79
4445
5240
3.606153
GCCTTGTTTTGTACTAGTGCACG
60.606
47.826
13.67
0.00
31.44
5.34
4449
5244
6.371809
TGAAAGCCTTGTTTTGTACTAGTG
57.628
37.500
5.39
0.00
0.00
2.74
4450
5245
6.770785
TGATGAAAGCCTTGTTTTGTACTAGT
59.229
34.615
0.00
0.00
0.00
2.57
4451
5246
7.078228
GTGATGAAAGCCTTGTTTTGTACTAG
58.922
38.462
0.00
0.00
0.00
2.57
4452
5247
6.544197
TGTGATGAAAGCCTTGTTTTGTACTA
59.456
34.615
0.00
0.00
0.00
1.82
4453
5248
5.359576
TGTGATGAAAGCCTTGTTTTGTACT
59.640
36.000
0.00
0.00
0.00
2.73
4454
5249
5.587289
TGTGATGAAAGCCTTGTTTTGTAC
58.413
37.500
0.00
0.00
0.00
2.90
4455
5250
5.221224
CCTGTGATGAAAGCCTTGTTTTGTA
60.221
40.000
0.00
0.00
0.00
2.41
4456
5251
4.441913
CCTGTGATGAAAGCCTTGTTTTGT
60.442
41.667
0.00
0.00
0.00
2.83
4457
5252
4.053295
CCTGTGATGAAAGCCTTGTTTTG
58.947
43.478
0.00
0.00
0.00
2.44
4458
5253
3.070015
CCCTGTGATGAAAGCCTTGTTTT
59.930
43.478
0.00
0.00
0.00
2.43
4459
5254
2.629617
CCCTGTGATGAAAGCCTTGTTT
59.370
45.455
0.00
0.00
0.00
2.83
4460
5255
2.242043
CCCTGTGATGAAAGCCTTGTT
58.758
47.619
0.00
0.00
0.00
2.83
4461
5256
1.915141
CCCTGTGATGAAAGCCTTGT
58.085
50.000
0.00
0.00
0.00
3.16
4462
5257
0.529378
GCCCTGTGATGAAAGCCTTG
59.471
55.000
0.00
0.00
0.00
3.61
4463
5258
0.112995
TGCCCTGTGATGAAAGCCTT
59.887
50.000
0.00
0.00
0.00
4.35
4464
5259
0.112995
TTGCCCTGTGATGAAAGCCT
59.887
50.000
0.00
0.00
0.00
4.58
4465
5260
1.188863
ATTGCCCTGTGATGAAAGCC
58.811
50.000
0.00
0.00
0.00
4.35
4466
5261
4.098349
TGAATATTGCCCTGTGATGAAAGC
59.902
41.667
0.00
0.00
0.00
3.51
4467
5262
5.125900
TGTGAATATTGCCCTGTGATGAAAG
59.874
40.000
0.00
0.00
0.00
2.62
4468
5263
5.015515
TGTGAATATTGCCCTGTGATGAAA
58.984
37.500
0.00
0.00
0.00
2.69
4469
5264
4.598022
TGTGAATATTGCCCTGTGATGAA
58.402
39.130
0.00
0.00
0.00
2.57
4470
5265
4.233632
TGTGAATATTGCCCTGTGATGA
57.766
40.909
0.00
0.00
0.00
2.92
4471
5266
5.524971
AATGTGAATATTGCCCTGTGATG
57.475
39.130
0.00
0.00
0.00
3.07
4472
5267
6.367983
ACTAATGTGAATATTGCCCTGTGAT
58.632
36.000
0.00
0.00
0.00
3.06
4473
5268
5.754782
ACTAATGTGAATATTGCCCTGTGA
58.245
37.500
0.00
0.00
0.00
3.58
4474
5269
5.009010
GGACTAATGTGAATATTGCCCTGTG
59.991
44.000
0.00
0.00
0.00
3.66
4475
5270
5.133221
GGACTAATGTGAATATTGCCCTGT
58.867
41.667
0.00
0.00
0.00
4.00
4476
5271
4.520492
GGGACTAATGTGAATATTGCCCTG
59.480
45.833
0.00
0.00
30.77
4.45
4477
5272
4.729868
GGGACTAATGTGAATATTGCCCT
58.270
43.478
0.00
0.00
30.77
5.19
4478
5273
3.502211
CGGGACTAATGTGAATATTGCCC
59.498
47.826
0.00
0.00
0.00
5.36
4479
5274
3.502211
CCGGGACTAATGTGAATATTGCC
59.498
47.826
0.00
0.00
0.00
4.52
4480
5275
4.134563
ACCGGGACTAATGTGAATATTGC
58.865
43.478
6.32
0.00
0.00
3.56
4481
5276
5.820423
TGAACCGGGACTAATGTGAATATTG
59.180
40.000
6.32
0.00
0.00
1.90
4482
5277
5.996644
TGAACCGGGACTAATGTGAATATT
58.003
37.500
6.32
0.00
0.00
1.28
4483
5278
5.130477
ACTGAACCGGGACTAATGTGAATAT
59.870
40.000
6.32
0.00
0.00
1.28
4484
5279
4.468510
ACTGAACCGGGACTAATGTGAATA
59.531
41.667
6.32
0.00
0.00
1.75
4485
5280
3.263425
ACTGAACCGGGACTAATGTGAAT
59.737
43.478
6.32
0.00
0.00
2.57
4486
5281
2.635915
ACTGAACCGGGACTAATGTGAA
59.364
45.455
6.32
0.00
0.00
3.18
4487
5282
2.232941
GACTGAACCGGGACTAATGTGA
59.767
50.000
6.32
0.00
0.00
3.58
4488
5283
2.028476
TGACTGAACCGGGACTAATGTG
60.028
50.000
6.32
0.00
0.00
3.21
4489
5284
2.028385
GTGACTGAACCGGGACTAATGT
60.028
50.000
6.32
0.00
0.00
2.71
4490
5285
2.618053
GTGACTGAACCGGGACTAATG
58.382
52.381
6.32
0.00
0.00
1.90
4491
5286
1.203994
CGTGACTGAACCGGGACTAAT
59.796
52.381
6.32
0.00
0.00
1.73
4492
5287
0.599558
CGTGACTGAACCGGGACTAA
59.400
55.000
6.32
0.00
0.00
2.24
4493
5288
0.250858
TCGTGACTGAACCGGGACTA
60.251
55.000
6.32
0.00
0.00
2.59
4494
5289
1.111116
TTCGTGACTGAACCGGGACT
61.111
55.000
6.32
0.00
0.00
3.85
4495
5290
0.942884
GTTCGTGACTGAACCGGGAC
60.943
60.000
6.32
0.00
41.88
4.46
4496
5291
1.364901
GTTCGTGACTGAACCGGGA
59.635
57.895
6.32
0.00
41.88
5.14
4497
5292
3.946907
GTTCGTGACTGAACCGGG
58.053
61.111
6.32
0.00
41.88
5.73
4501
5296
0.942884
GTCCCGGTTCGTGACTGAAC
60.943
60.000
0.00
10.38
45.91
3.18
4502
5297
1.111116
AGTCCCGGTTCGTGACTGAA
61.111
55.000
9.22
0.00
42.28
3.02
4503
5298
0.250858
TAGTCCCGGTTCGTGACTGA
60.251
55.000
17.52
2.93
43.49
3.41
4504
5299
0.599558
TTAGTCCCGGTTCGTGACTG
59.400
55.000
17.52
0.00
43.49
3.51
4505
5300
1.203994
CATTAGTCCCGGTTCGTGACT
59.796
52.381
13.76
13.76
45.32
3.41
4506
5301
1.067354
ACATTAGTCCCGGTTCGTGAC
60.067
52.381
0.00
0.00
34.71
3.67
4507
5302
1.067425
CACATTAGTCCCGGTTCGTGA
60.067
52.381
0.00
0.00
0.00
4.35
4508
5303
1.067425
TCACATTAGTCCCGGTTCGTG
60.067
52.381
0.00
0.00
0.00
4.35
4509
5304
1.203994
CTCACATTAGTCCCGGTTCGT
59.796
52.381
0.00
0.00
0.00
3.85
4510
5305
1.922570
CTCACATTAGTCCCGGTTCG
58.077
55.000
0.00
0.00
0.00
3.95
4511
5306
1.066430
TGCTCACATTAGTCCCGGTTC
60.066
52.381
0.00
0.00
0.00
3.62
4512
5307
0.981183
TGCTCACATTAGTCCCGGTT
59.019
50.000
0.00
0.00
0.00
4.44
4513
5308
1.204146
ATGCTCACATTAGTCCCGGT
58.796
50.000
0.00
0.00
30.07
5.28
4514
5309
1.942657
CAATGCTCACATTAGTCCCGG
59.057
52.381
0.00
0.00
44.83
5.73
4515
5310
1.942657
CCAATGCTCACATTAGTCCCG
59.057
52.381
0.00
0.00
44.83
5.14
4516
5311
2.945668
GACCAATGCTCACATTAGTCCC
59.054
50.000
6.20
0.00
44.37
4.46
4519
5314
2.680805
CGGGACCAATGCTCACATTAGT
60.681
50.000
0.00
0.00
44.83
2.24
4520
5315
1.942657
CGGGACCAATGCTCACATTAG
59.057
52.381
0.00
0.00
44.83
1.73
4521
5316
1.557371
TCGGGACCAATGCTCACATTA
59.443
47.619
0.00
0.00
44.83
1.90
4523
5318
0.548031
ATCGGGACCAATGCTCACAT
59.452
50.000
0.00
0.00
38.49
3.21
4524
5319
0.327924
AATCGGGACCAATGCTCACA
59.672
50.000
0.00
0.00
0.00
3.58
4525
5320
1.017387
GAATCGGGACCAATGCTCAC
58.983
55.000
0.00
0.00
0.00
3.51
4526
5321
0.461870
CGAATCGGGACCAATGCTCA
60.462
55.000
0.00
0.00
0.00
4.26
4527
5322
0.462047
ACGAATCGGGACCAATGCTC
60.462
55.000
7.80
0.00
0.00
4.26
4528
5323
0.744414
CACGAATCGGGACCAATGCT
60.744
55.000
7.80
0.00
28.17
3.79
4529
5324
1.721487
CACGAATCGGGACCAATGC
59.279
57.895
7.80
0.00
28.17
3.56
4530
5325
1.721487
GCACGAATCGGGACCAATG
59.279
57.895
9.93
0.00
28.17
2.82
4531
5326
1.813753
CGCACGAATCGGGACCAAT
60.814
57.895
9.93
0.00
28.17
3.16
4532
5327
2.433491
CGCACGAATCGGGACCAA
60.433
61.111
9.93
0.00
28.17
3.67
4533
5328
4.444838
CCGCACGAATCGGGACCA
62.445
66.667
9.93
0.00
42.99
4.02
4535
5330
2.894240
TTAGCCGCACGAATCGGGAC
62.894
60.000
9.93
0.00
46.51
4.46
4536
5331
2.622903
CTTAGCCGCACGAATCGGGA
62.623
60.000
9.93
0.00
46.51
5.14
4537
5332
2.202824
TTAGCCGCACGAATCGGG
60.203
61.111
7.80
3.33
46.51
5.14
4539
5334
2.871427
GCCTTAGCCGCACGAATCG
61.871
63.158
0.00
0.00
0.00
3.34
4540
5335
1.160329
ATGCCTTAGCCGCACGAATC
61.160
55.000
0.00
0.00
39.49
2.52
4541
5336
0.748005
AATGCCTTAGCCGCACGAAT
60.748
50.000
0.00
0.00
39.49
3.34
4542
5337
0.108089
TAATGCCTTAGCCGCACGAA
60.108
50.000
0.00
0.00
39.49
3.85
4543
5338
0.529773
CTAATGCCTTAGCCGCACGA
60.530
55.000
0.00
0.00
39.49
4.35
4544
5339
0.810031
ACTAATGCCTTAGCCGCACG
60.810
55.000
8.50
0.00
39.49
5.34
4545
5340
0.938008
GACTAATGCCTTAGCCGCAC
59.062
55.000
8.50
0.00
39.49
5.34
4546
5341
0.179056
GGACTAATGCCTTAGCCGCA
60.179
55.000
8.50
0.00
38.33
5.69
4547
5342
0.885150
GGGACTAATGCCTTAGCCGC
60.885
60.000
8.50
2.93
38.33
6.53
4548
5343
0.600255
CGGGACTAATGCCTTAGCCG
60.600
60.000
8.50
10.12
38.33
5.52
4549
5344
0.250338
CCGGGACTAATGCCTTAGCC
60.250
60.000
8.50
10.09
38.33
3.93
4550
5345
0.468648
ACCGGGACTAATGCCTTAGC
59.531
55.000
6.32
2.56
38.33
3.09
4551
5346
2.169769
TGAACCGGGACTAATGCCTTAG
59.830
50.000
6.32
7.17
40.25
2.18
4552
5347
2.093341
GTGAACCGGGACTAATGCCTTA
60.093
50.000
6.32
0.00
33.05
2.69
4553
5348
0.988832
TGAACCGGGACTAATGCCTT
59.011
50.000
6.32
0.00
33.05
4.35
4554
5349
0.252197
GTGAACCGGGACTAATGCCT
59.748
55.000
6.32
0.00
33.05
4.75
4555
5350
0.746923
GGTGAACCGGGACTAATGCC
60.747
60.000
6.32
0.00
0.00
4.40
4556
5351
0.252197
AGGTGAACCGGGACTAATGC
59.748
55.000
6.32
0.00
42.08
3.56
4557
5352
2.024176
CAGGTGAACCGGGACTAATG
57.976
55.000
6.32
0.00
42.08
1.90
4566
5361
2.132089
TAAAGGGCCCAGGTGAACCG
62.132
60.000
27.56
0.00
42.08
4.44
4567
5362
0.323451
CTAAAGGGCCCAGGTGAACC
60.323
60.000
27.56
0.00
0.00
3.62
4568
5363
0.404426
ACTAAAGGGCCCAGGTGAAC
59.596
55.000
27.56
0.00
0.00
3.18
4569
5364
0.696501
GACTAAAGGGCCCAGGTGAA
59.303
55.000
27.56
1.43
0.00
3.18
4570
5365
1.205460
GGACTAAAGGGCCCAGGTGA
61.205
60.000
27.56
0.00
37.05
4.02
4571
5366
1.303282
GGACTAAAGGGCCCAGGTG
59.697
63.158
27.56
13.92
37.05
4.00
4572
5367
3.836617
GGACTAAAGGGCCCAGGT
58.163
61.111
27.56
16.46
37.05
4.00
4577
5372
0.323451
CCAACTGGGACTAAAGGGCC
60.323
60.000
0.00
0.00
44.23
5.80
4578
5373
0.404426
ACCAACTGGGACTAAAGGGC
59.596
55.000
0.00
0.00
41.15
5.19
4579
5374
1.886655
GCACCAACTGGGACTAAAGGG
60.887
57.143
0.00
0.00
41.15
3.95
4580
5375
1.534729
GCACCAACTGGGACTAAAGG
58.465
55.000
0.00
0.00
41.15
3.11
4581
5376
1.202879
TGGCACCAACTGGGACTAAAG
60.203
52.381
0.00
0.00
41.15
1.85
4582
5377
0.847373
TGGCACCAACTGGGACTAAA
59.153
50.000
0.00
0.00
41.15
1.85
4583
5378
0.109723
GTGGCACCAACTGGGACTAA
59.890
55.000
6.29
0.00
41.15
2.24
4584
5379
1.758592
GTGGCACCAACTGGGACTA
59.241
57.895
6.29
0.00
41.15
2.59
4585
5380
2.515901
GTGGCACCAACTGGGACT
59.484
61.111
6.29
0.00
41.15
3.85
4586
5381
2.951475
TTCGTGGCACCAACTGGGAC
62.951
60.000
12.86
0.00
41.15
4.46
4587
5382
2.747443
TTCGTGGCACCAACTGGGA
61.747
57.895
12.86
0.00
41.15
4.37
4588
5383
2.203280
TTCGTGGCACCAACTGGG
60.203
61.111
12.86
0.00
44.81
4.45
4589
5384
2.551912
GGTTCGTGGCACCAACTGG
61.552
63.158
23.87
4.96
42.17
4.00
4590
5385
2.892334
CGGTTCGTGGCACCAACTG
61.892
63.158
23.87
21.94
33.36
3.16
4591
5386
2.590575
CGGTTCGTGGCACCAACT
60.591
61.111
23.87
0.00
33.36
3.16
4592
5387
3.656045
CCGGTTCGTGGCACCAAC
61.656
66.667
18.22
18.22
33.36
3.77
4593
5388
4.939368
CCCGGTTCGTGGCACCAA
62.939
66.667
12.86
1.99
33.36
3.67
4596
5391
2.438951
TTAGTCCCGGTTCGTGGCAC
62.439
60.000
7.79
7.79
0.00
5.01
4597
5392
1.756408
TTTAGTCCCGGTTCGTGGCA
61.756
55.000
0.00
0.00
0.00
4.92
4598
5393
1.004679
TTTAGTCCCGGTTCGTGGC
60.005
57.895
0.00
0.00
0.00
5.01
4599
5394
0.390735
CCTTTAGTCCCGGTTCGTGG
60.391
60.000
0.00
0.00
0.00
4.94
4600
5395
0.390735
CCCTTTAGTCCCGGTTCGTG
60.391
60.000
0.00
0.00
0.00
4.35
4601
5396
0.833409
ACCCTTTAGTCCCGGTTCGT
60.833
55.000
0.00
0.00
0.00
3.85
4602
5397
0.390735
CACCCTTTAGTCCCGGTTCG
60.391
60.000
0.00
0.00
0.00
3.95
4603
5398
0.675837
GCACCCTTTAGTCCCGGTTC
60.676
60.000
0.00
0.00
0.00
3.62
4604
5399
1.377612
GCACCCTTTAGTCCCGGTT
59.622
57.895
0.00
0.00
0.00
4.44
4605
5400
2.951101
CGCACCCTTTAGTCCCGGT
61.951
63.158
0.00
0.00
0.00
5.28
4606
5401
1.968050
ATCGCACCCTTTAGTCCCGG
61.968
60.000
0.00
0.00
0.00
5.73
4607
5402
0.810031
CATCGCACCCTTTAGTCCCG
60.810
60.000
0.00
0.00
0.00
5.14
4608
5403
1.095807
GCATCGCACCCTTTAGTCCC
61.096
60.000
0.00
0.00
0.00
4.46
4609
5404
1.095807
GGCATCGCACCCTTTAGTCC
61.096
60.000
0.00
0.00
0.00
3.85
4610
5405
1.095807
GGGCATCGCACCCTTTAGTC
61.096
60.000
0.40
0.00
44.68
2.59
4611
5406
1.077716
GGGCATCGCACCCTTTAGT
60.078
57.895
0.40
0.00
44.68
2.24
4612
5407
3.827634
GGGCATCGCACCCTTTAG
58.172
61.111
0.40
0.00
44.68
1.85
4618
5413
1.166531
GGACTAATGGGCATCGCACC
61.167
60.000
0.00
0.00
0.00
5.01
4619
5414
1.166531
GGGACTAATGGGCATCGCAC
61.167
60.000
0.00
0.00
0.00
5.34
4620
5415
1.148273
GGGACTAATGGGCATCGCA
59.852
57.895
0.00
0.00
0.00
5.10
4621
5416
1.961277
CGGGACTAATGGGCATCGC
60.961
63.158
0.00
0.00
0.00
4.58
4622
5417
1.301716
CCGGGACTAATGGGCATCG
60.302
63.158
0.00
0.00
0.00
3.84
4623
5418
0.182775
AACCGGGACTAATGGGCATC
59.817
55.000
6.32
0.00
0.00
3.91
4624
5419
0.106719
CAACCGGGACTAATGGGCAT
60.107
55.000
6.32
0.00
0.00
4.40
4625
5420
1.301623
CAACCGGGACTAATGGGCA
59.698
57.895
6.32
0.00
0.00
5.36
4626
5421
1.453197
CCAACCGGGACTAATGGGC
60.453
63.158
6.32
0.00
40.01
5.36
4627
5422
0.393808
CACCAACCGGGACTAATGGG
60.394
60.000
6.32
0.00
41.15
4.00
4628
5423
0.393808
CCACCAACCGGGACTAATGG
60.394
60.000
6.32
6.76
41.15
3.16
4629
5424
1.029947
GCCACCAACCGGGACTAATG
61.030
60.000
6.32
0.00
41.15
1.90
4630
5425
1.301954
GCCACCAACCGGGACTAAT
59.698
57.895
6.32
0.00
41.15
1.73
4631
5426
2.148052
TGCCACCAACCGGGACTAA
61.148
57.895
6.32
0.00
41.15
2.24
4632
5427
2.527123
TGCCACCAACCGGGACTA
60.527
61.111
6.32
0.00
41.15
2.59
4633
5428
4.265056
GTGCCACCAACCGGGACT
62.265
66.667
6.32
0.00
41.35
3.85
4644
5439
2.400269
TTAGTCCCGGTTGGTGCCAC
62.400
60.000
0.00
0.00
34.77
5.01
4645
5440
1.706995
TTTAGTCCCGGTTGGTGCCA
61.707
55.000
0.00
0.00
34.77
4.92
4646
5441
0.958876
CTTTAGTCCCGGTTGGTGCC
60.959
60.000
0.00
0.00
34.77
5.01
4647
5442
0.958876
CCTTTAGTCCCGGTTGGTGC
60.959
60.000
0.00
0.00
34.77
5.01
4648
5443
0.399075
ACCTTTAGTCCCGGTTGGTG
59.601
55.000
0.00
0.00
34.77
4.17
4649
5444
1.142936
AACCTTTAGTCCCGGTTGGT
58.857
50.000
0.00
0.00
39.43
3.67
4650
5445
2.303890
ACTAACCTTTAGTCCCGGTTGG
59.696
50.000
0.00
0.00
42.74
3.77
4651
5446
3.593096
GACTAACCTTTAGTCCCGGTTG
58.407
50.000
13.07
0.00
40.94
3.77
4652
5447
3.969287
GACTAACCTTTAGTCCCGGTT
57.031
47.619
13.07
0.00
43.10
4.44
4665
5460
2.182827
ACCGGGACTAAAGGACTAACC
58.817
52.381
6.32
0.00
39.35
2.85
4666
5461
3.259123
TCAACCGGGACTAAAGGACTAAC
59.741
47.826
6.32
0.00
0.00
2.34
4667
5462
3.509442
TCAACCGGGACTAAAGGACTAA
58.491
45.455
6.32
0.00
0.00
2.24
4668
5463
3.173953
TCAACCGGGACTAAAGGACTA
57.826
47.619
6.32
0.00
0.00
2.59
4669
5464
2.019807
TCAACCGGGACTAAAGGACT
57.980
50.000
6.32
0.00
0.00
3.85
4670
5465
2.629051
CATCAACCGGGACTAAAGGAC
58.371
52.381
6.32
0.00
0.00
3.85
4671
5466
1.065709
GCATCAACCGGGACTAAAGGA
60.066
52.381
6.32
0.00
0.00
3.36
4672
5467
1.379527
GCATCAACCGGGACTAAAGG
58.620
55.000
6.32
0.00
0.00
3.11
4673
5468
1.339631
TGGCATCAACCGGGACTAAAG
60.340
52.381
6.32
0.00
0.00
1.85
4674
5469
0.693622
TGGCATCAACCGGGACTAAA
59.306
50.000
6.32
0.00
0.00
1.85
4675
5470
0.035820
GTGGCATCAACCGGGACTAA
60.036
55.000
6.32
0.00
0.00
2.24
4676
5471
1.600107
GTGGCATCAACCGGGACTA
59.400
57.895
6.32
0.00
0.00
2.59
4677
5472
2.351276
GTGGCATCAACCGGGACT
59.649
61.111
6.32
0.00
0.00
3.85
4678
5473
2.750237
GGTGGCATCAACCGGGAC
60.750
66.667
6.32
0.00
0.00
4.46
4679
5474
2.835049
TTGGTGGCATCAACCGGGA
61.835
57.895
9.58
0.00
0.00
5.14
4680
5475
2.282816
TTGGTGGCATCAACCGGG
60.283
61.111
9.58
0.00
0.00
5.73
4681
5476
1.603455
AGTTGGTGGCATCAACCGG
60.603
57.895
33.66
0.00
43.83
5.28
4682
5477
1.580942
CAGTTGGTGGCATCAACCG
59.419
57.895
33.66
23.66
43.83
4.44
4683
5478
1.966762
CCAGTTGGTGGCATCAACC
59.033
57.895
33.66
19.23
43.83
3.77
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.