Multiple sequence alignment - TraesCS7D01G022900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G022900 chr7D 100.000 2606 0 0 1 2606 10716163 10718768 0.000000e+00 4813
1 TraesCS7D01G022900 chr7A 86.713 1016 70 27 706 1701 9756714 9757684 0.000000e+00 1068
2 TraesCS7D01G022900 chr7A 90.839 644 29 12 1 623 9755974 9756608 0.000000e+00 835
3 TraesCS7D01G022900 chr7A 79.208 505 102 3 1831 2334 93530731 93530229 5.340000e-92 348
4 TraesCS7D01G022900 chr4A 88.255 894 57 25 745 1609 728085212 728084338 0.000000e+00 1026
5 TraesCS7D01G022900 chr4A 88.235 629 28 23 2 614 728085944 728085346 0.000000e+00 710
6 TraesCS7D01G022900 chr3D 79.532 513 96 9 1823 2334 529838461 529837957 8.870000e-95 357
7 TraesCS7D01G022900 chr3B 78.659 492 95 9 1829 2315 659067019 659067505 4.190000e-83 318
8 TraesCS7D01G022900 chr3B 77.866 506 107 5 1831 2333 648899279 648899782 2.520000e-80 309
9 TraesCS7D01G022900 chr6D 78.193 509 100 11 1831 2334 68088311 68087809 5.410000e-82 315
10 TraesCS7D01G022900 chr2D 78.004 491 96 12 1831 2315 322128356 322128840 5.450000e-77 298
11 TraesCS7D01G022900 chr4D 77.510 498 108 4 1831 2326 54280916 54280421 1.960000e-76 296
12 TraesCS7D01G022900 chr5D 77.273 506 108 5 1831 2334 556094079 556093579 9.120000e-75 291
13 TraesCS7D01G022900 chr5B 76.726 507 114 4 1831 2334 507639402 507638897 1.970000e-71 279
14 TraesCS7D01G022900 chr2B 92.810 153 10 1 145 296 510167747 510167595 1.210000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G022900 chr7D 10716163 10718768 2605 False 4813.0 4813 100.000 1 2606 1 chr7D.!!$F1 2605
1 TraesCS7D01G022900 chr7A 9755974 9757684 1710 False 951.5 1068 88.776 1 1701 2 chr7A.!!$F1 1700
2 TraesCS7D01G022900 chr7A 93530229 93530731 502 True 348.0 348 79.208 1831 2334 1 chr7A.!!$R1 503
3 TraesCS7D01G022900 chr4A 728084338 728085944 1606 True 868.0 1026 88.245 2 1609 2 chr4A.!!$R1 1607
4 TraesCS7D01G022900 chr3D 529837957 529838461 504 True 357.0 357 79.532 1823 2334 1 chr3D.!!$R1 511
5 TraesCS7D01G022900 chr3B 648899279 648899782 503 False 309.0 309 77.866 1831 2333 1 chr3B.!!$F1 502
6 TraesCS7D01G022900 chr6D 68087809 68088311 502 True 315.0 315 78.193 1831 2334 1 chr6D.!!$R1 503
7 TraesCS7D01G022900 chr5D 556093579 556094079 500 True 291.0 291 77.273 1831 2334 1 chr5D.!!$R1 503
8 TraesCS7D01G022900 chr5B 507638897 507639402 505 True 279.0 279 76.726 1831 2334 1 chr5B.!!$R1 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
892 974 0.034059 CCGTTCAGCCTGTCAGTCTT 59.966 55.0 0.0 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2343 2475 0.032815 TCGATTGACAGCGACACCAA 59.967 50.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 1.972752 TCTACTGCGTACGTGGGCA 60.973 57.895 17.90 13.60 37.63 5.36
79 80 3.822192 CACGCGAGATCCGGTCCA 61.822 66.667 15.93 0.00 39.04 4.02
80 81 2.833582 ACGCGAGATCCGGTCCAT 60.834 61.111 15.93 0.00 39.04 3.41
95 109 1.948145 GTCCATACGTCGACTCCTGAT 59.052 52.381 14.70 0.00 0.00 2.90
97 111 1.001268 CCATACGTCGACTCCTGATGG 60.001 57.143 14.70 13.77 0.00 3.51
107 121 4.709886 TCGACTCCTGATGGTTAAAGATGA 59.290 41.667 0.00 0.00 34.23 2.92
124 138 9.723601 TTAAAGATGAAAGATTTTGATTTGGGG 57.276 29.630 0.00 0.00 0.00 4.96
125 139 7.557875 AAGATGAAAGATTTTGATTTGGGGA 57.442 32.000 0.00 0.00 0.00 4.81
126 140 7.744678 AGATGAAAGATTTTGATTTGGGGAT 57.255 32.000 0.00 0.00 0.00 3.85
127 141 8.154420 AGATGAAAGATTTTGATTTGGGGATT 57.846 30.769 0.00 0.00 0.00 3.01
359 377 5.447818 CCACTCTCTGAACACTGTTGTTTTC 60.448 44.000 0.00 0.00 46.43 2.29
428 456 9.148104 GAATTGTCGATTGATCTGATGATGATA 57.852 33.333 0.00 0.00 32.19 2.15
429 457 9.668497 AATTGTCGATTGATCTGATGATGATAT 57.332 29.630 0.00 0.00 32.19 1.63
430 458 8.475331 TTGTCGATTGATCTGATGATGATATG 57.525 34.615 0.00 0.00 32.19 1.78
431 459 7.039882 TGTCGATTGATCTGATGATGATATGG 58.960 38.462 0.00 0.00 32.19 2.74
588 622 2.666190 GACGTGGCAGAGCAGCAA 60.666 61.111 0.00 0.00 35.83 3.91
594 628 2.107903 GGCAGAGCAGCAAGAGAGC 61.108 63.158 0.00 0.00 35.83 4.09
613 679 1.789464 GCGTGTGACTCTGAACTGAAG 59.211 52.381 0.00 0.00 0.00 3.02
630 698 9.046296 TGAACTGAAGTTTTGAACTAGAGAATC 57.954 33.333 0.00 0.00 41.91 2.52
649 717 8.364129 GAGAATCTGATGGACTGAAACTAATC 57.636 38.462 0.00 0.00 0.00 1.75
651 719 8.324306 AGAATCTGATGGACTGAAACTAATCAA 58.676 33.333 0.00 0.00 0.00 2.57
656 733 7.676004 TGATGGACTGAAACTAATCAACACTA 58.324 34.615 0.00 0.00 0.00 2.74
683 760 6.925610 CGTAGGAAATTTGGATGAGAATGA 57.074 37.500 0.00 0.00 0.00 2.57
684 761 6.952743 CGTAGGAAATTTGGATGAGAATGAG 58.047 40.000 0.00 0.00 0.00 2.90
685 762 6.763135 CGTAGGAAATTTGGATGAGAATGAGA 59.237 38.462 0.00 0.00 0.00 3.27
686 763 7.443575 CGTAGGAAATTTGGATGAGAATGAGAT 59.556 37.037 0.00 0.00 0.00 2.75
687 764 7.584122 AGGAAATTTGGATGAGAATGAGATG 57.416 36.000 0.00 0.00 0.00 2.90
688 765 7.124052 AGGAAATTTGGATGAGAATGAGATGT 58.876 34.615 0.00 0.00 0.00 3.06
689 766 7.618512 AGGAAATTTGGATGAGAATGAGATGTT 59.381 33.333 0.00 0.00 0.00 2.71
690 767 7.705325 GGAAATTTGGATGAGAATGAGATGTTG 59.295 37.037 0.00 0.00 0.00 3.33
691 768 7.713734 AATTTGGATGAGAATGAGATGTTGT 57.286 32.000 0.00 0.00 0.00 3.32
692 769 6.505044 TTTGGATGAGAATGAGATGTTGTG 57.495 37.500 0.00 0.00 0.00 3.33
693 770 5.425196 TGGATGAGAATGAGATGTTGTGA 57.575 39.130 0.00 0.00 0.00 3.58
694 771 5.997843 TGGATGAGAATGAGATGTTGTGAT 58.002 37.500 0.00 0.00 0.00 3.06
695 772 5.820947 TGGATGAGAATGAGATGTTGTGATG 59.179 40.000 0.00 0.00 0.00 3.07
696 773 5.821470 GGATGAGAATGAGATGTTGTGATGT 59.179 40.000 0.00 0.00 0.00 3.06
697 774 6.318144 GGATGAGAATGAGATGTTGTGATGTT 59.682 38.462 0.00 0.00 0.00 2.71
698 775 6.490566 TGAGAATGAGATGTTGTGATGTTG 57.509 37.500 0.00 0.00 0.00 3.33
699 776 5.999600 TGAGAATGAGATGTTGTGATGTTGT 59.000 36.000 0.00 0.00 0.00 3.32
700 777 6.072893 TGAGAATGAGATGTTGTGATGTTGTG 60.073 38.462 0.00 0.00 0.00 3.33
701 778 5.182570 AGAATGAGATGTTGTGATGTTGTGG 59.817 40.000 0.00 0.00 0.00 4.17
702 779 2.553602 TGAGATGTTGTGATGTTGTGGC 59.446 45.455 0.00 0.00 0.00 5.01
703 780 1.888512 AGATGTTGTGATGTTGTGGCC 59.111 47.619 0.00 0.00 0.00 5.36
704 781 1.612950 GATGTTGTGATGTTGTGGCCA 59.387 47.619 0.00 0.00 0.00 5.36
713 790 3.008923 TGATGTTGTGGCCAGTGATCTTA 59.991 43.478 5.11 0.00 0.00 2.10
722 799 4.019411 TGGCCAGTGATCTTAACATGAGAA 60.019 41.667 0.00 0.00 0.00 2.87
745 822 2.433604 GAGATGCTCTGGTGAAGATGGA 59.566 50.000 0.00 0.00 33.29 3.41
766 843 7.186570 TGGAGATGAACTATGAGATGTTGAA 57.813 36.000 0.00 0.00 0.00 2.69
778 855 4.939439 TGAGATGTTGAATGATGGTGTCAG 59.061 41.667 0.00 0.00 40.92 3.51
779 856 5.169992 AGATGTTGAATGATGGTGTCAGA 57.830 39.130 0.00 0.00 40.92 3.27
780 857 5.752650 AGATGTTGAATGATGGTGTCAGAT 58.247 37.500 0.00 0.00 40.92 2.90
781 858 5.821470 AGATGTTGAATGATGGTGTCAGATC 59.179 40.000 0.00 0.00 40.92 2.75
811 893 2.867109 ATAGGATCCCTGATTTGGCG 57.133 50.000 8.55 0.00 34.61 5.69
819 901 2.503765 TCCCTGATTTGGCGATTCACTA 59.496 45.455 0.00 0.00 0.00 2.74
841 923 0.665068 TGTCGTTCGTTCATGTCCGG 60.665 55.000 0.00 0.00 0.00 5.14
865 947 1.951130 CAATGGTCGATCTCCGGCG 60.951 63.158 0.00 0.00 45.31 6.46
866 948 2.125326 AATGGTCGATCTCCGGCGA 61.125 57.895 9.30 0.00 45.31 5.54
868 950 4.632458 GGTCGATCTCCGGCGAGC 62.632 72.222 9.30 14.06 45.31 5.03
869 951 3.587933 GTCGATCTCCGGCGAGCT 61.588 66.667 9.30 0.00 37.18 4.09
870 952 3.586961 TCGATCTCCGGCGAGCTG 61.587 66.667 9.30 1.86 39.14 4.24
871 953 3.586961 CGATCTCCGGCGAGCTGA 61.587 66.667 9.30 0.53 35.94 4.26
872 954 2.334653 GATCTCCGGCGAGCTGAG 59.665 66.667 9.30 6.50 35.94 3.35
873 955 3.839642 GATCTCCGGCGAGCTGAGC 62.840 68.421 9.30 0.00 35.94 4.26
879 961 4.742201 GGCGAGCTGAGCCGTTCA 62.742 66.667 13.32 0.00 45.58 3.18
885 967 2.345244 CTGAGCCGTTCAGCCTGT 59.655 61.111 0.00 0.00 46.30 4.00
886 968 1.739562 CTGAGCCGTTCAGCCTGTC 60.740 63.158 0.00 0.00 46.30 3.51
887 969 2.343758 GAGCCGTTCAGCCTGTCA 59.656 61.111 0.00 0.00 0.00 3.58
888 970 1.739562 GAGCCGTTCAGCCTGTCAG 60.740 63.158 0.00 0.00 0.00 3.51
889 971 2.031163 GCCGTTCAGCCTGTCAGT 59.969 61.111 0.00 0.00 0.00 3.41
890 972 2.029844 GCCGTTCAGCCTGTCAGTC 61.030 63.158 0.00 0.00 0.00 3.51
891 973 1.668294 CCGTTCAGCCTGTCAGTCT 59.332 57.895 0.00 0.00 0.00 3.24
892 974 0.034059 CCGTTCAGCCTGTCAGTCTT 59.966 55.000 0.00 0.00 0.00 3.01
932 1021 2.990479 GTCCTCCATTGACGGGCT 59.010 61.111 0.00 0.00 0.00 5.19
933 1022 1.450312 GTCCTCCATTGACGGGCTG 60.450 63.158 0.00 0.00 0.00 4.85
971 1068 3.610114 GCTCATAAATAACCATGGCGCAG 60.610 47.826 13.04 0.00 0.00 5.18
1007 1104 0.387878 GATCGAGGTAGCATGGCGAG 60.388 60.000 0.00 0.00 34.25 5.03
1009 1106 2.490148 CGAGGTAGCATGGCGAGGA 61.490 63.158 0.00 0.00 0.00 3.71
1047 1144 4.094646 ATCACGTCCATGGCGGCA 62.095 61.111 25.35 16.34 33.14 5.69
1048 1145 4.758251 TCACGTCCATGGCGGCAG 62.758 66.667 25.35 17.13 33.14 4.85
1508 1611 3.003763 GTGGAAGGGCGAGGAGGT 61.004 66.667 0.00 0.00 0.00 3.85
1618 1733 3.554692 CGTGATCGCCGGCAACTC 61.555 66.667 28.98 19.20 0.00 3.01
1619 1734 2.125512 GTGATCGCCGGCAACTCT 60.126 61.111 28.98 4.93 0.00 3.24
1620 1735 2.125552 TGATCGCCGGCAACTCTG 60.126 61.111 28.98 9.08 0.00 3.35
1629 1751 2.280797 GCAACTCTGCCACGTGGA 60.281 61.111 38.30 20.99 43.26 4.02
1636 1758 0.037326 TCTGCCACGTGGAAGACATC 60.037 55.000 37.11 18.83 44.98 3.06
1645 1767 1.511305 GGAAGACATCCGTGCTCGA 59.489 57.895 10.21 0.00 38.79 4.04
1654 1776 1.208358 CCGTGCTCGACTGACGTAA 59.792 57.895 10.21 0.00 43.13 3.18
1655 1777 0.386352 CCGTGCTCGACTGACGTAAA 60.386 55.000 10.21 0.00 43.13 2.01
1656 1778 1.614385 CGTGCTCGACTGACGTAAAT 58.386 50.000 1.00 0.00 43.13 1.40
1657 1779 2.476686 CCGTGCTCGACTGACGTAAATA 60.477 50.000 10.21 0.00 43.13 1.40
1658 1780 3.165890 CGTGCTCGACTGACGTAAATAA 58.834 45.455 1.00 0.00 43.13 1.40
1660 1782 4.258899 CGTGCTCGACTGACGTAAATAAAG 60.259 45.833 1.00 0.00 43.13 1.85
1661 1783 4.620184 GTGCTCGACTGACGTAAATAAAGT 59.380 41.667 0.00 0.00 43.13 2.66
1662 1784 4.619760 TGCTCGACTGACGTAAATAAAGTG 59.380 41.667 0.00 0.00 43.13 3.16
1663 1785 4.490479 GCTCGACTGACGTAAATAAAGTGC 60.490 45.833 0.00 0.00 43.13 4.40
1666 1788 5.636121 TCGACTGACGTAAATAAAGTGCAAT 59.364 36.000 0.00 0.00 43.13 3.56
1667 1789 5.728049 CGACTGACGTAAATAAAGTGCAATG 59.272 40.000 0.00 0.00 37.22 2.82
1668 1790 5.938322 ACTGACGTAAATAAAGTGCAATGG 58.062 37.500 0.00 0.00 0.00 3.16
1672 1794 6.151985 TGACGTAAATAAAGTGCAATGGGAAT 59.848 34.615 0.00 0.00 0.00 3.01
1718 1848 5.705609 TTTCAGCAGAGTGAATAAAACCC 57.294 39.130 0.00 0.00 36.34 4.11
1719 1849 4.365514 TCAGCAGAGTGAATAAAACCCA 57.634 40.909 0.00 0.00 0.00 4.51
1720 1850 4.922206 TCAGCAGAGTGAATAAAACCCAT 58.078 39.130 0.00 0.00 0.00 4.00
1721 1851 4.701651 TCAGCAGAGTGAATAAAACCCATG 59.298 41.667 0.00 0.00 0.00 3.66
1722 1852 4.701651 CAGCAGAGTGAATAAAACCCATGA 59.298 41.667 0.00 0.00 0.00 3.07
1723 1853 4.946157 AGCAGAGTGAATAAAACCCATGAG 59.054 41.667 0.00 0.00 0.00 2.90
1724 1854 4.702131 GCAGAGTGAATAAAACCCATGAGT 59.298 41.667 0.00 0.00 0.00 3.41
1725 1855 5.880332 GCAGAGTGAATAAAACCCATGAGTA 59.120 40.000 0.00 0.00 0.00 2.59
1726 1856 6.543831 GCAGAGTGAATAAAACCCATGAGTAT 59.456 38.462 0.00 0.00 0.00 2.12
1727 1857 7.254932 GCAGAGTGAATAAAACCCATGAGTATC 60.255 40.741 0.00 0.00 0.00 2.24
1742 1872 5.562506 TGAGTATCAAAGAAGACGATCGT 57.437 39.130 22.97 22.97 45.97 3.73
1743 1873 5.332707 TGAGTATCAAAGAAGACGATCGTG 58.667 41.667 28.12 9.52 45.97 4.35
1744 1874 5.123344 TGAGTATCAAAGAAGACGATCGTGA 59.877 40.000 28.12 15.05 45.97 4.35
1745 1875 6.137794 AGTATCAAAGAAGACGATCGTGAT 57.862 37.500 28.12 20.77 34.98 3.06
1746 1876 7.012044 TGAGTATCAAAGAAGACGATCGTGATA 59.988 37.037 28.12 19.76 45.97 2.15
1747 1877 7.877003 AGTATCAAAGAAGACGATCGTGATAT 58.123 34.615 28.12 8.41 35.53 1.63
1748 1878 9.000486 AGTATCAAAGAAGACGATCGTGATATA 58.000 33.333 28.12 8.66 35.53 0.86
1749 1879 9.608617 GTATCAAAGAAGACGATCGTGATATAA 57.391 33.333 28.12 4.40 35.53 0.98
1751 1881 8.920509 TCAAAGAAGACGATCGTGATATAAAA 57.079 30.769 28.12 2.53 0.00 1.52
1752 1882 9.529325 TCAAAGAAGACGATCGTGATATAAAAT 57.471 29.630 28.12 0.00 0.00 1.82
1753 1883 9.573102 CAAAGAAGACGATCGTGATATAAAATG 57.427 33.333 28.12 9.43 0.00 2.32
1754 1884 8.873215 AAGAAGACGATCGTGATATAAAATGT 57.127 30.769 28.12 0.00 0.00 2.71
1755 1885 9.961265 AAGAAGACGATCGTGATATAAAATGTA 57.039 29.630 28.12 0.00 0.00 2.29
1756 1886 9.961265 AGAAGACGATCGTGATATAAAATGTAA 57.039 29.630 28.12 0.00 0.00 2.41
1782 1912 8.488651 AATGTACTTAGGAAAAAGTGATACGG 57.511 34.615 0.00 0.00 39.95 4.02
1783 1913 5.870978 TGTACTTAGGAAAAAGTGATACGGC 59.129 40.000 0.00 0.00 39.95 5.68
1784 1914 5.161943 ACTTAGGAAAAAGTGATACGGCT 57.838 39.130 0.00 0.00 38.28 5.52
1785 1915 6.290294 ACTTAGGAAAAAGTGATACGGCTA 57.710 37.500 0.00 0.00 38.28 3.93
1786 1916 6.704310 ACTTAGGAAAAAGTGATACGGCTAA 58.296 36.000 0.00 0.00 38.28 3.09
1787 1917 7.336396 ACTTAGGAAAAAGTGATACGGCTAAT 58.664 34.615 0.00 0.00 38.28 1.73
1788 1918 7.280205 ACTTAGGAAAAAGTGATACGGCTAATG 59.720 37.037 0.00 0.00 38.28 1.90
1789 1919 5.497474 AGGAAAAAGTGATACGGCTAATGT 58.503 37.500 0.00 0.00 0.00 2.71
1790 1920 5.585047 AGGAAAAAGTGATACGGCTAATGTC 59.415 40.000 0.00 0.00 0.00 3.06
1791 1921 5.585047 GGAAAAAGTGATACGGCTAATGTCT 59.415 40.000 0.00 0.00 0.00 3.41
1792 1922 6.759827 GGAAAAAGTGATACGGCTAATGTCTA 59.240 38.462 0.00 0.00 0.00 2.59
1793 1923 7.254353 GGAAAAAGTGATACGGCTAATGTCTAC 60.254 40.741 0.00 0.00 0.00 2.59
1794 1924 6.466885 AAAGTGATACGGCTAATGTCTACT 57.533 37.500 0.00 0.00 0.00 2.57
1795 1925 7.578310 AAAGTGATACGGCTAATGTCTACTA 57.422 36.000 0.00 0.00 0.00 1.82
1796 1926 6.804770 AGTGATACGGCTAATGTCTACTAG 57.195 41.667 0.00 0.00 0.00 2.57
1797 1927 5.706369 AGTGATACGGCTAATGTCTACTAGG 59.294 44.000 0.00 0.00 0.00 3.02
1798 1928 5.008331 TGATACGGCTAATGTCTACTAGGG 58.992 45.833 0.00 0.00 0.00 3.53
1799 1929 2.595238 ACGGCTAATGTCTACTAGGGG 58.405 52.381 0.00 0.00 0.00 4.79
1800 1930 2.176364 ACGGCTAATGTCTACTAGGGGA 59.824 50.000 0.00 0.00 0.00 4.81
1801 1931 3.181420 ACGGCTAATGTCTACTAGGGGAT 60.181 47.826 0.00 0.00 0.00 3.85
1802 1932 3.193691 CGGCTAATGTCTACTAGGGGATG 59.806 52.174 0.00 0.00 0.00 3.51
1803 1933 3.055747 GGCTAATGTCTACTAGGGGATGC 60.056 52.174 0.00 0.00 0.00 3.91
1804 1934 3.835395 GCTAATGTCTACTAGGGGATGCT 59.165 47.826 0.00 0.00 0.00 3.79
1805 1935 5.017490 GCTAATGTCTACTAGGGGATGCTA 58.983 45.833 0.00 0.00 0.00 3.49
1806 1936 5.659079 GCTAATGTCTACTAGGGGATGCTAT 59.341 44.000 0.00 0.00 0.00 2.97
1807 1937 6.406400 GCTAATGTCTACTAGGGGATGCTATG 60.406 46.154 0.00 0.00 0.00 2.23
1808 1938 3.779444 TGTCTACTAGGGGATGCTATGG 58.221 50.000 0.00 0.00 0.00 2.74
1809 1939 3.100671 GTCTACTAGGGGATGCTATGGG 58.899 54.545 0.00 0.00 0.00 4.00
1810 1940 1.834263 CTACTAGGGGATGCTATGGGC 59.166 57.143 0.00 0.00 42.22 5.36
1811 1941 0.842467 ACTAGGGGATGCTATGGGCC 60.842 60.000 0.00 0.00 40.92 5.80
1812 1942 1.903877 CTAGGGGATGCTATGGGCCG 61.904 65.000 0.00 0.00 40.92 6.13
1813 1943 2.689573 TAGGGGATGCTATGGGCCGT 62.690 60.000 2.58 2.58 40.92 5.68
1814 1944 2.515901 GGGATGCTATGGGCCGTT 59.484 61.111 2.17 0.00 40.92 4.44
1815 1945 1.600916 GGGATGCTATGGGCCGTTC 60.601 63.158 2.17 0.00 40.92 3.95
1816 1946 1.148273 GGATGCTATGGGCCGTTCA 59.852 57.895 2.17 2.92 40.92 3.18
1817 1947 0.465460 GGATGCTATGGGCCGTTCAA 60.465 55.000 2.17 0.00 40.92 2.69
1818 1948 1.609208 GATGCTATGGGCCGTTCAAT 58.391 50.000 2.17 0.00 40.92 2.57
1819 1949 1.956477 GATGCTATGGGCCGTTCAATT 59.044 47.619 2.17 0.00 40.92 2.32
1820 1950 1.846007 TGCTATGGGCCGTTCAATTT 58.154 45.000 2.17 0.00 40.92 1.82
1821 1951 1.748493 TGCTATGGGCCGTTCAATTTC 59.252 47.619 2.17 0.00 40.92 2.17
1822 1952 2.024414 GCTATGGGCCGTTCAATTTCT 58.976 47.619 2.17 0.00 34.27 2.52
1823 1953 2.033424 GCTATGGGCCGTTCAATTTCTC 59.967 50.000 2.17 0.00 34.27 2.87
1824 1954 1.474330 ATGGGCCGTTCAATTTCTCC 58.526 50.000 0.00 0.00 0.00 3.71
1825 1955 0.958382 TGGGCCGTTCAATTTCTCCG 60.958 55.000 0.00 0.00 0.00 4.63
1826 1956 1.136774 GGCCGTTCAATTTCTCCGC 59.863 57.895 0.00 0.00 0.00 5.54
1827 1957 1.305930 GGCCGTTCAATTTCTCCGCT 61.306 55.000 0.00 0.00 0.00 5.52
1828 1958 1.365699 GCCGTTCAATTTCTCCGCTA 58.634 50.000 0.00 0.00 0.00 4.26
1829 1959 1.940613 GCCGTTCAATTTCTCCGCTAT 59.059 47.619 0.00 0.00 0.00 2.97
1846 1976 2.224066 GCTATGACCACCTAGCGACAAT 60.224 50.000 0.00 0.00 32.54 2.71
1861 1991 3.058914 GCGACAATTACAAGCACTGAAGT 60.059 43.478 0.00 0.00 0.00 3.01
1895 2025 3.148279 GTCGTCATCGCCCCTCCT 61.148 66.667 0.00 0.00 36.96 3.69
1905 2035 1.682684 GCCCCTCCTTCGTCAGAGA 60.683 63.158 0.00 0.00 31.43 3.10
1924 2055 2.356695 AGACGGGCAAAACTTGTTGTAC 59.643 45.455 0.00 0.00 0.00 2.90
1954 2085 4.362932 TGAGAAGTCGTCATGCTAAGAG 57.637 45.455 0.00 0.00 0.00 2.85
2003 2134 0.740868 CCGCCGCTGATGAAGAGAAA 60.741 55.000 0.00 0.00 0.00 2.52
2004 2135 1.293924 CGCCGCTGATGAAGAGAAAT 58.706 50.000 0.00 0.00 0.00 2.17
2009 2140 4.333926 GCCGCTGATGAAGAGAAATTTAGT 59.666 41.667 0.00 0.00 0.00 2.24
2041 2172 4.065088 TCCAACTTGTAGACACATGAAGC 58.935 43.478 0.00 0.00 33.76 3.86
2043 2174 4.083643 CCAACTTGTAGACACATGAAGCTG 60.084 45.833 0.00 0.00 33.76 4.24
2052 2183 0.670546 ACATGAAGCTGGACGAACGG 60.671 55.000 0.00 0.00 0.00 4.44
2062 2193 0.531200 GGACGAACGGAGACCAGATT 59.469 55.000 0.00 0.00 0.00 2.40
2064 2195 0.170561 ACGAACGGAGACCAGATTCG 59.829 55.000 13.38 13.38 45.76 3.34
2065 2196 0.450583 CGAACGGAGACCAGATTCGA 59.549 55.000 10.97 0.00 43.66 3.71
2068 2199 1.546961 ACGGAGACCAGATTCGAGTT 58.453 50.000 0.00 0.00 0.00 3.01
2085 2216 3.548014 CGAGTTGATCCACCAAACACAAC 60.548 47.826 0.00 0.00 38.15 3.32
2094 2225 2.616842 CACCAAACACAACTACTGACCC 59.383 50.000 0.00 0.00 0.00 4.46
2118 2249 2.628178 TCTTGCGATATCCGTTGGAGAT 59.372 45.455 0.00 0.00 36.24 2.75
2143 2274 2.777972 CCATACGCCCTCCGACGAA 61.778 63.158 0.00 0.00 41.02 3.85
2150 2281 1.728672 CCCTCCGACGAAGCTAGAC 59.271 63.158 0.00 0.00 0.00 2.59
2157 2288 1.598183 CGACGAAGCTAGACGCATCAT 60.598 52.381 0.00 0.00 42.61 2.45
2161 2292 1.001268 GAAGCTAGACGCATCATCGGA 60.001 52.381 0.00 0.00 42.61 4.55
2164 2295 1.269309 GCTAGACGCATCATCGGAACT 60.269 52.381 0.00 0.00 38.92 3.01
2165 2296 2.031069 GCTAGACGCATCATCGGAACTA 60.031 50.000 0.00 0.00 38.92 2.24
2172 2303 2.037251 GCATCATCGGAACTAGGGCTAA 59.963 50.000 0.00 0.00 0.00 3.09
2210 2341 0.453793 CATCTTCAGAGAGCCGTCGT 59.546 55.000 0.00 0.00 34.85 4.34
2212 2343 0.605589 TCTTCAGAGAGCCGTCGTCA 60.606 55.000 0.00 0.00 0.00 4.35
2223 2354 1.413767 CCGTCGTCATCTCGCCTTTG 61.414 60.000 0.00 0.00 0.00 2.77
2235 2366 0.957395 CGCCTTTGTGAGCAGGACAT 60.957 55.000 0.00 0.00 30.81 3.06
2241 2372 2.093306 TGTGAGCAGGACATAAACCG 57.907 50.000 0.00 0.00 0.00 4.44
2309 2441 4.147449 CCGAGATCCACTGCGCCA 62.147 66.667 4.18 0.00 0.00 5.69
2322 2454 2.195683 CGCCACCATGCCCCTAAT 59.804 61.111 0.00 0.00 0.00 1.73
2334 2466 1.559682 GCCCCTAATGACACAGGAGAA 59.440 52.381 6.52 0.00 33.42 2.87
2335 2467 2.026262 GCCCCTAATGACACAGGAGAAA 60.026 50.000 6.52 0.00 33.42 2.52
2336 2468 3.878778 CCCCTAATGACACAGGAGAAAG 58.121 50.000 6.52 0.00 33.42 2.62
2337 2469 3.370953 CCCCTAATGACACAGGAGAAAGG 60.371 52.174 6.52 0.00 33.42 3.11
2338 2470 3.370953 CCCTAATGACACAGGAGAAAGGG 60.371 52.174 6.52 0.00 35.53 3.95
2339 2471 3.519510 CCTAATGACACAGGAGAAAGGGA 59.480 47.826 0.00 0.00 33.42 4.20
2340 2472 4.019321 CCTAATGACACAGGAGAAAGGGAA 60.019 45.833 0.00 0.00 33.42 3.97
2341 2473 3.710209 ATGACACAGGAGAAAGGGAAG 57.290 47.619 0.00 0.00 0.00 3.46
2342 2474 2.689658 TGACACAGGAGAAAGGGAAGA 58.310 47.619 0.00 0.00 0.00 2.87
2343 2475 3.251484 TGACACAGGAGAAAGGGAAGAT 58.749 45.455 0.00 0.00 0.00 2.40
2344 2476 3.652869 TGACACAGGAGAAAGGGAAGATT 59.347 43.478 0.00 0.00 0.00 2.40
2345 2477 4.006319 GACACAGGAGAAAGGGAAGATTG 58.994 47.826 0.00 0.00 0.00 2.67
2346 2478 3.245052 ACACAGGAGAAAGGGAAGATTGG 60.245 47.826 0.00 0.00 0.00 3.16
2347 2479 2.989571 ACAGGAGAAAGGGAAGATTGGT 59.010 45.455 0.00 0.00 0.00 3.67
2348 2480 3.245052 ACAGGAGAAAGGGAAGATTGGTG 60.245 47.826 0.00 0.00 0.00 4.17
2349 2481 2.989571 AGGAGAAAGGGAAGATTGGTGT 59.010 45.455 0.00 0.00 0.00 4.16
2350 2482 3.009584 AGGAGAAAGGGAAGATTGGTGTC 59.990 47.826 0.00 0.00 0.00 3.67
2351 2483 3.003480 GAGAAAGGGAAGATTGGTGTCG 58.997 50.000 0.00 0.00 0.00 4.35
2352 2484 1.468914 GAAAGGGAAGATTGGTGTCGC 59.531 52.381 0.00 0.00 0.00 5.19
2353 2485 0.693049 AAGGGAAGATTGGTGTCGCT 59.307 50.000 0.00 0.00 36.23 4.93
2354 2486 0.036010 AGGGAAGATTGGTGTCGCTG 60.036 55.000 0.00 0.00 33.72 5.18
2355 2487 0.321653 GGGAAGATTGGTGTCGCTGT 60.322 55.000 0.00 0.00 0.00 4.40
2356 2488 1.079503 GGAAGATTGGTGTCGCTGTC 58.920 55.000 0.00 0.00 0.00 3.51
2357 2489 1.608025 GGAAGATTGGTGTCGCTGTCA 60.608 52.381 0.00 0.00 0.00 3.58
2358 2490 2.143122 GAAGATTGGTGTCGCTGTCAA 58.857 47.619 0.00 0.00 0.00 3.18
2359 2491 2.479566 AGATTGGTGTCGCTGTCAAT 57.520 45.000 0.00 0.00 33.17 2.57
2360 2492 2.350522 AGATTGGTGTCGCTGTCAATC 58.649 47.619 0.00 0.00 43.22 2.67
2361 2493 1.061131 GATTGGTGTCGCTGTCAATCG 59.939 52.381 0.00 0.00 37.04 3.34
2362 2494 0.032815 TTGGTGTCGCTGTCAATCGA 59.967 50.000 0.00 0.00 0.00 3.59
2363 2495 0.246360 TGGTGTCGCTGTCAATCGAT 59.754 50.000 0.00 0.00 37.06 3.59
2364 2496 0.647410 GGTGTCGCTGTCAATCGATG 59.353 55.000 0.00 0.00 37.06 3.84
2365 2497 0.647410 GTGTCGCTGTCAATCGATGG 59.353 55.000 0.00 0.00 37.06 3.51
2366 2498 0.460109 TGTCGCTGTCAATCGATGGG 60.460 55.000 0.00 0.00 37.06 4.00
2367 2499 0.179111 GTCGCTGTCAATCGATGGGA 60.179 55.000 0.00 0.00 37.06 4.37
2368 2500 0.752658 TCGCTGTCAATCGATGGGAT 59.247 50.000 0.00 0.00 36.78 3.85
2369 2501 0.863799 CGCTGTCAATCGATGGGATG 59.136 55.000 0.00 0.00 34.93 3.51
2370 2502 0.590195 GCTGTCAATCGATGGGATGC 59.410 55.000 0.00 5.73 34.93 3.91
2371 2503 1.233019 CTGTCAATCGATGGGATGCC 58.767 55.000 0.00 0.00 34.93 4.40
2372 2504 0.532640 TGTCAATCGATGGGATGCCG 60.533 55.000 0.00 0.00 34.93 5.69
2373 2505 1.071299 TCAATCGATGGGATGCCGG 59.929 57.895 0.00 0.00 34.93 6.13
2374 2506 1.071299 CAATCGATGGGATGCCGGA 59.929 57.895 5.05 0.00 34.93 5.14
2375 2507 0.534877 CAATCGATGGGATGCCGGAA 60.535 55.000 5.05 0.00 34.93 4.30
2376 2508 0.535102 AATCGATGGGATGCCGGAAC 60.535 55.000 5.05 0.00 34.93 3.62
2377 2509 2.397413 ATCGATGGGATGCCGGAACC 62.397 60.000 5.05 4.27 32.92 3.62
2378 2510 2.203351 GATGGGATGCCGGAACCC 60.203 66.667 19.62 19.62 43.51 4.11
2379 2511 2.696125 ATGGGATGCCGGAACCCT 60.696 61.111 24.28 12.26 43.59 4.34
2380 2512 1.385347 ATGGGATGCCGGAACCCTA 60.385 57.895 24.28 6.99 43.59 3.53
2381 2513 1.418908 ATGGGATGCCGGAACCCTAG 61.419 60.000 24.28 0.00 43.59 3.02
2382 2514 2.070650 GGGATGCCGGAACCCTAGT 61.071 63.158 19.30 0.00 40.39 2.57
2383 2515 1.446366 GGATGCCGGAACCCTAGTC 59.554 63.158 5.05 0.00 0.00 2.59
2384 2516 1.067582 GATGCCGGAACCCTAGTCG 59.932 63.158 5.05 0.00 0.00 4.18
2385 2517 2.973180 GATGCCGGAACCCTAGTCGC 62.973 65.000 5.05 0.00 0.00 5.19
2386 2518 4.525949 GCCGGAACCCTAGTCGCC 62.526 72.222 5.05 0.00 0.00 5.54
2387 2519 2.758737 CCGGAACCCTAGTCGCCT 60.759 66.667 0.00 0.00 0.00 5.52
2388 2520 2.494918 CGGAACCCTAGTCGCCTG 59.505 66.667 0.00 0.00 0.00 4.85
2389 2521 2.348888 CGGAACCCTAGTCGCCTGT 61.349 63.158 0.00 0.00 0.00 4.00
2390 2522 1.885163 CGGAACCCTAGTCGCCTGTT 61.885 60.000 0.00 0.00 0.00 3.16
2391 2523 0.108281 GGAACCCTAGTCGCCTGTTC 60.108 60.000 0.00 0.00 35.68 3.18
2392 2524 0.108281 GAACCCTAGTCGCCTGTTCC 60.108 60.000 0.00 0.00 31.41 3.62
2393 2525 1.551019 AACCCTAGTCGCCTGTTCCC 61.551 60.000 0.00 0.00 0.00 3.97
2394 2526 1.686110 CCCTAGTCGCCTGTTCCCT 60.686 63.158 0.00 0.00 0.00 4.20
2395 2527 1.265454 CCCTAGTCGCCTGTTCCCTT 61.265 60.000 0.00 0.00 0.00 3.95
2396 2528 0.108138 CCTAGTCGCCTGTTCCCTTG 60.108 60.000 0.00 0.00 0.00 3.61
2397 2529 0.895530 CTAGTCGCCTGTTCCCTTGA 59.104 55.000 0.00 0.00 0.00 3.02
2398 2530 1.275291 CTAGTCGCCTGTTCCCTTGAA 59.725 52.381 0.00 0.00 0.00 2.69
2399 2531 0.035458 AGTCGCCTGTTCCCTTGAAG 59.965 55.000 0.00 0.00 0.00 3.02
2400 2532 0.955919 GTCGCCTGTTCCCTTGAAGG 60.956 60.000 3.69 3.69 34.30 3.46
2401 2533 1.125093 TCGCCTGTTCCCTTGAAGGA 61.125 55.000 13.97 0.00 37.67 3.36
2402 2534 0.674895 CGCCTGTTCCCTTGAAGGAG 60.675 60.000 13.97 1.40 37.67 3.69
2403 2535 0.693049 GCCTGTTCCCTTGAAGGAGA 59.307 55.000 13.97 5.54 37.67 3.71
2404 2536 1.339535 GCCTGTTCCCTTGAAGGAGAG 60.340 57.143 13.97 1.22 37.67 3.20
2405 2537 2.260822 CCTGTTCCCTTGAAGGAGAGA 58.739 52.381 13.97 0.00 37.67 3.10
2406 2538 2.027653 CCTGTTCCCTTGAAGGAGAGAC 60.028 54.545 13.97 6.10 37.67 3.36
2407 2539 1.618837 TGTTCCCTTGAAGGAGAGACG 59.381 52.381 13.97 0.00 37.67 4.18
2408 2540 1.893801 GTTCCCTTGAAGGAGAGACGA 59.106 52.381 13.97 0.00 37.67 4.20
2409 2541 1.840737 TCCCTTGAAGGAGAGACGAG 58.159 55.000 13.97 0.00 37.67 4.18
2410 2542 0.820871 CCCTTGAAGGAGAGACGAGG 59.179 60.000 13.97 0.00 37.67 4.63
2411 2543 0.820871 CCTTGAAGGAGAGACGAGGG 59.179 60.000 4.95 0.00 37.67 4.30
2412 2544 0.820871 CTTGAAGGAGAGACGAGGGG 59.179 60.000 0.00 0.00 0.00 4.79
2413 2545 0.408309 TTGAAGGAGAGACGAGGGGA 59.592 55.000 0.00 0.00 0.00 4.81
2414 2546 0.631753 TGAAGGAGAGACGAGGGGAT 59.368 55.000 0.00 0.00 0.00 3.85
2415 2547 1.036707 GAAGGAGAGACGAGGGGATG 58.963 60.000 0.00 0.00 0.00 3.51
2416 2548 0.631753 AAGGAGAGACGAGGGGATGA 59.368 55.000 0.00 0.00 0.00 2.92
2417 2549 0.184933 AGGAGAGACGAGGGGATGAG 59.815 60.000 0.00 0.00 0.00 2.90
2418 2550 0.183971 GGAGAGACGAGGGGATGAGA 59.816 60.000 0.00 0.00 0.00 3.27
2419 2551 1.604604 GAGAGACGAGGGGATGAGAG 58.395 60.000 0.00 0.00 0.00 3.20
2420 2552 0.184933 AGAGACGAGGGGATGAGAGG 59.815 60.000 0.00 0.00 0.00 3.69
2421 2553 1.456705 AGACGAGGGGATGAGAGGC 60.457 63.158 0.00 0.00 0.00 4.70
2422 2554 2.835431 ACGAGGGGATGAGAGGCG 60.835 66.667 0.00 0.00 0.00 5.52
2423 2555 4.292178 CGAGGGGATGAGAGGCGC 62.292 72.222 0.00 0.00 0.00 6.53
2424 2556 4.292178 GAGGGGATGAGAGGCGCG 62.292 72.222 0.00 0.00 0.00 6.86
2426 2558 3.224324 GGGGATGAGAGGCGCGTA 61.224 66.667 8.43 0.00 0.00 4.42
2427 2559 2.574955 GGGGATGAGAGGCGCGTAT 61.575 63.158 8.43 0.00 0.00 3.06
2428 2560 1.373497 GGGATGAGAGGCGCGTATG 60.373 63.158 8.43 0.00 0.00 2.39
2429 2561 1.660355 GGATGAGAGGCGCGTATGA 59.340 57.895 8.43 0.00 0.00 2.15
2430 2562 0.387878 GGATGAGAGGCGCGTATGAG 60.388 60.000 8.43 0.00 0.00 2.90
2431 2563 0.593618 GATGAGAGGCGCGTATGAGA 59.406 55.000 8.43 0.00 0.00 3.27
2432 2564 0.595588 ATGAGAGGCGCGTATGAGAG 59.404 55.000 8.43 0.00 0.00 3.20
2433 2565 1.371145 GAGAGGCGCGTATGAGAGC 60.371 63.158 8.43 0.00 36.18 4.09
2434 2566 2.064723 GAGAGGCGCGTATGAGAGCA 62.065 60.000 8.43 0.00 38.70 4.26
2435 2567 1.226974 GAGGCGCGTATGAGAGCAA 60.227 57.895 8.43 0.00 38.70 3.91
2436 2568 1.483424 GAGGCGCGTATGAGAGCAAC 61.483 60.000 8.43 0.00 38.70 4.17
2437 2569 2.526120 GGCGCGTATGAGAGCAACC 61.526 63.158 8.43 0.00 38.70 3.77
2438 2570 1.809619 GCGCGTATGAGAGCAACCA 60.810 57.895 8.43 0.00 36.91 3.67
2439 2571 1.154205 GCGCGTATGAGAGCAACCAT 61.154 55.000 8.43 0.00 36.91 3.55
2440 2572 1.868109 GCGCGTATGAGAGCAACCATA 60.868 52.381 8.43 0.00 36.91 2.74
2441 2573 1.787155 CGCGTATGAGAGCAACCATAC 59.213 52.381 0.00 10.48 40.82 2.39
2442 2574 2.798145 CGCGTATGAGAGCAACCATACA 60.798 50.000 16.88 0.00 43.05 2.29
2443 2575 3.194861 GCGTATGAGAGCAACCATACAA 58.805 45.455 16.88 0.00 43.05 2.41
2444 2576 3.001330 GCGTATGAGAGCAACCATACAAC 59.999 47.826 16.88 8.68 43.05 3.32
2445 2577 4.180817 CGTATGAGAGCAACCATACAACA 58.819 43.478 16.88 0.00 43.05 3.33
2446 2578 4.629634 CGTATGAGAGCAACCATACAACAA 59.370 41.667 16.88 0.00 43.05 2.83
2447 2579 5.445939 CGTATGAGAGCAACCATACAACAAC 60.446 44.000 16.88 0.00 43.05 3.32
2448 2580 4.085357 TGAGAGCAACCATACAACAACT 57.915 40.909 0.00 0.00 0.00 3.16
2449 2581 5.222079 TGAGAGCAACCATACAACAACTA 57.778 39.130 0.00 0.00 0.00 2.24
2450 2582 5.237815 TGAGAGCAACCATACAACAACTAG 58.762 41.667 0.00 0.00 0.00 2.57
2451 2583 4.003648 AGAGCAACCATACAACAACTAGC 58.996 43.478 0.00 0.00 0.00 3.42
2452 2584 2.742053 AGCAACCATACAACAACTAGCG 59.258 45.455 0.00 0.00 0.00 4.26
2453 2585 2.739913 GCAACCATACAACAACTAGCGA 59.260 45.455 0.00 0.00 0.00 4.93
2454 2586 3.187637 GCAACCATACAACAACTAGCGAA 59.812 43.478 0.00 0.00 0.00 4.70
2455 2587 4.142687 GCAACCATACAACAACTAGCGAAT 60.143 41.667 0.00 0.00 0.00 3.34
2456 2588 5.064198 GCAACCATACAACAACTAGCGAATA 59.936 40.000 0.00 0.00 0.00 1.75
2457 2589 6.705782 CAACCATACAACAACTAGCGAATAG 58.294 40.000 0.00 0.00 37.53 1.73
2474 2606 7.687005 GCGAATAGCGAATATAAGATAGCTT 57.313 36.000 0.00 0.00 44.57 3.74
2475 2607 8.783999 GCGAATAGCGAATATAAGATAGCTTA 57.216 34.615 2.37 2.37 44.57 3.09
2476 2608 9.400638 GCGAATAGCGAATATAAGATAGCTTAT 57.599 33.333 16.87 16.87 44.61 1.73
2490 2622 8.942338 AAGATAGCTTATTAAACGTGATGTGA 57.058 30.769 0.00 0.00 31.07 3.58
2491 2623 8.942338 AGATAGCTTATTAAACGTGATGTGAA 57.058 30.769 0.00 0.00 0.00 3.18
2492 2624 9.378551 AGATAGCTTATTAAACGTGATGTGAAA 57.621 29.630 0.00 0.00 0.00 2.69
2493 2625 9.982291 GATAGCTTATTAAACGTGATGTGAAAA 57.018 29.630 0.00 0.00 0.00 2.29
2502 2634 9.790389 TTAAACGTGATGTGAAAATAAAGTTGT 57.210 25.926 0.00 0.00 0.00 3.32
2503 2635 7.678194 AACGTGATGTGAAAATAAAGTTGTG 57.322 32.000 0.00 0.00 0.00 3.33
2504 2636 5.685511 ACGTGATGTGAAAATAAAGTTGTGC 59.314 36.000 0.00 0.00 0.00 4.57
2505 2637 5.116983 CGTGATGTGAAAATAAAGTTGTGCC 59.883 40.000 0.00 0.00 0.00 5.01
2506 2638 5.982516 GTGATGTGAAAATAAAGTTGTGCCA 59.017 36.000 0.00 0.00 0.00 4.92
2507 2639 6.646240 GTGATGTGAAAATAAAGTTGTGCCAT 59.354 34.615 0.00 0.00 0.00 4.40
2508 2640 7.171337 GTGATGTGAAAATAAAGTTGTGCCATT 59.829 33.333 0.00 0.00 0.00 3.16
2509 2641 6.841443 TGTGAAAATAAAGTTGTGCCATTG 57.159 33.333 0.00 0.00 0.00 2.82
2510 2642 6.577103 TGTGAAAATAAAGTTGTGCCATTGA 58.423 32.000 0.00 0.00 0.00 2.57
2511 2643 7.215789 TGTGAAAATAAAGTTGTGCCATTGAT 58.784 30.769 0.00 0.00 0.00 2.57
2512 2644 7.714377 TGTGAAAATAAAGTTGTGCCATTGATT 59.286 29.630 0.00 0.00 0.00 2.57
2513 2645 9.202273 GTGAAAATAAAGTTGTGCCATTGATTA 57.798 29.630 0.00 0.00 0.00 1.75
2514 2646 9.770097 TGAAAATAAAGTTGTGCCATTGATTAA 57.230 25.926 0.00 0.00 0.00 1.40
2518 2650 9.995003 AATAAAGTTGTGCCATTGATTAAAAGA 57.005 25.926 0.00 0.00 0.00 2.52
2519 2651 9.995003 ATAAAGTTGTGCCATTGATTAAAAGAA 57.005 25.926 0.00 0.00 0.00 2.52
2520 2652 7.951530 AAGTTGTGCCATTGATTAAAAGAAG 57.048 32.000 0.00 0.00 0.00 2.85
2521 2653 7.054491 AGTTGTGCCATTGATTAAAAGAAGT 57.946 32.000 0.00 0.00 0.00 3.01
2522 2654 6.925165 AGTTGTGCCATTGATTAAAAGAAGTG 59.075 34.615 0.00 0.00 0.00 3.16
2523 2655 6.647334 TGTGCCATTGATTAAAAGAAGTGA 57.353 33.333 0.00 0.00 0.00 3.41
2524 2656 7.048629 TGTGCCATTGATTAAAAGAAGTGAA 57.951 32.000 0.00 0.00 0.00 3.18
2525 2657 7.669427 TGTGCCATTGATTAAAAGAAGTGAAT 58.331 30.769 0.00 0.00 0.00 2.57
2526 2658 8.801299 TGTGCCATTGATTAAAAGAAGTGAATA 58.199 29.630 0.00 0.00 0.00 1.75
2527 2659 9.076596 GTGCCATTGATTAAAAGAAGTGAATAC 57.923 33.333 0.00 0.00 0.00 1.89
2528 2660 8.801299 TGCCATTGATTAAAAGAAGTGAATACA 58.199 29.630 0.00 0.00 0.00 2.29
2529 2661 9.638239 GCCATTGATTAAAAGAAGTGAATACAA 57.362 29.630 0.00 0.00 0.00 2.41
2533 2665 8.117813 TGATTAAAAGAAGTGAATACAACCCC 57.882 34.615 0.00 0.00 0.00 4.95
2534 2666 6.904463 TTAAAAGAAGTGAATACAACCCCC 57.096 37.500 0.00 0.00 0.00 5.40
2535 2667 4.463050 AAAGAAGTGAATACAACCCCCA 57.537 40.909 0.00 0.00 0.00 4.96
2536 2668 4.463050 AAGAAGTGAATACAACCCCCAA 57.537 40.909 0.00 0.00 0.00 4.12
2537 2669 3.763057 AGAAGTGAATACAACCCCCAAC 58.237 45.455 0.00 0.00 0.00 3.77
2538 2670 3.139397 AGAAGTGAATACAACCCCCAACA 59.861 43.478 0.00 0.00 0.00 3.33
2539 2671 3.603965 AGTGAATACAACCCCCAACAA 57.396 42.857 0.00 0.00 0.00 2.83
2540 2672 3.496331 AGTGAATACAACCCCCAACAAG 58.504 45.455 0.00 0.00 0.00 3.16
2541 2673 2.560981 GTGAATACAACCCCCAACAAGG 59.439 50.000 0.00 0.00 37.03 3.61
2542 2674 2.447429 TGAATACAACCCCCAACAAGGA 59.553 45.455 0.00 0.00 41.22 3.36
2543 2675 2.597578 ATACAACCCCCAACAAGGAC 57.402 50.000 0.00 0.00 41.22 3.85
2544 2676 0.479378 TACAACCCCCAACAAGGACC 59.521 55.000 0.00 0.00 41.22 4.46
2545 2677 1.231641 CAACCCCCAACAAGGACCA 59.768 57.895 0.00 0.00 41.22 4.02
2546 2678 0.178935 CAACCCCCAACAAGGACCAT 60.179 55.000 0.00 0.00 41.22 3.55
2547 2679 1.076350 CAACCCCCAACAAGGACCATA 59.924 52.381 0.00 0.00 41.22 2.74
2548 2680 1.693799 ACCCCCAACAAGGACCATAT 58.306 50.000 0.00 0.00 41.22 1.78
2549 2681 2.007636 ACCCCCAACAAGGACCATATT 58.992 47.619 0.00 0.00 41.22 1.28
2550 2682 3.203059 ACCCCCAACAAGGACCATATTA 58.797 45.455 0.00 0.00 41.22 0.98
2551 2683 3.053170 ACCCCCAACAAGGACCATATTAC 60.053 47.826 0.00 0.00 41.22 1.89
2552 2684 3.053245 CCCCCAACAAGGACCATATTACA 60.053 47.826 0.00 0.00 41.22 2.41
2553 2685 4.570933 CCCCCAACAAGGACCATATTACAA 60.571 45.833 0.00 0.00 41.22 2.41
2554 2686 4.644685 CCCCAACAAGGACCATATTACAAG 59.355 45.833 0.00 0.00 41.22 3.16
2555 2687 5.505780 CCCAACAAGGACCATATTACAAGA 58.494 41.667 0.00 0.00 41.22 3.02
2556 2688 5.590259 CCCAACAAGGACCATATTACAAGAG 59.410 44.000 0.00 0.00 41.22 2.85
2557 2689 5.066505 CCAACAAGGACCATATTACAAGAGC 59.933 44.000 0.00 0.00 41.22 4.09
2558 2690 4.442706 ACAAGGACCATATTACAAGAGCG 58.557 43.478 0.00 0.00 0.00 5.03
2559 2691 3.113260 AGGACCATATTACAAGAGCGC 57.887 47.619 0.00 0.00 0.00 5.92
2560 2692 2.143925 GGACCATATTACAAGAGCGCC 58.856 52.381 2.29 0.00 0.00 6.53
2561 2693 2.143925 GACCATATTACAAGAGCGCCC 58.856 52.381 2.29 0.00 0.00 6.13
2562 2694 1.202770 ACCATATTACAAGAGCGCCCC 60.203 52.381 2.29 0.00 0.00 5.80
2563 2695 1.202758 CCATATTACAAGAGCGCCCCA 60.203 52.381 2.29 0.00 0.00 4.96
2564 2696 2.146342 CATATTACAAGAGCGCCCCAG 58.854 52.381 2.29 0.00 0.00 4.45
2565 2697 1.491668 TATTACAAGAGCGCCCCAGA 58.508 50.000 2.29 0.00 0.00 3.86
2566 2698 0.839946 ATTACAAGAGCGCCCCAGAT 59.160 50.000 2.29 0.00 0.00 2.90
2567 2699 0.107703 TTACAAGAGCGCCCCAGATG 60.108 55.000 2.29 0.00 0.00 2.90
2568 2700 0.975556 TACAAGAGCGCCCCAGATGA 60.976 55.000 2.29 0.00 0.00 2.92
2569 2701 1.817099 CAAGAGCGCCCCAGATGAC 60.817 63.158 2.29 0.00 0.00 3.06
2570 2702 2.293318 AAGAGCGCCCCAGATGACA 61.293 57.895 2.29 0.00 0.00 3.58
2571 2703 2.512515 GAGCGCCCCAGATGACAC 60.513 66.667 2.29 0.00 0.00 3.67
2572 2704 4.457496 AGCGCCCCAGATGACACG 62.457 66.667 2.29 0.00 0.00 4.49
2573 2705 4.760047 GCGCCCCAGATGACACGT 62.760 66.667 0.00 0.00 0.00 4.49
2574 2706 2.815211 CGCCCCAGATGACACGTG 60.815 66.667 15.48 15.48 0.00 4.49
2575 2707 3.127533 GCCCCAGATGACACGTGC 61.128 66.667 17.22 9.30 0.00 5.34
2576 2708 2.436646 CCCCAGATGACACGTGCC 60.437 66.667 17.22 4.78 0.00 5.01
2577 2709 2.347114 CCCAGATGACACGTGCCA 59.653 61.111 17.22 12.24 0.00 4.92
2578 2710 2.034879 CCCAGATGACACGTGCCAC 61.035 63.158 17.22 8.24 0.00 5.01
2579 2711 1.004560 CCAGATGACACGTGCCACT 60.005 57.895 17.22 8.24 0.00 4.00
2580 2712 1.016130 CCAGATGACACGTGCCACTC 61.016 60.000 17.22 10.43 0.00 3.51
2581 2713 0.319813 CAGATGACACGTGCCACTCA 60.320 55.000 17.22 12.38 0.00 3.41
2582 2714 0.392706 AGATGACACGTGCCACTCAA 59.607 50.000 17.22 0.00 0.00 3.02
2583 2715 0.512952 GATGACACGTGCCACTCAAC 59.487 55.000 17.22 6.93 0.00 3.18
2584 2716 0.884704 ATGACACGTGCCACTCAACC 60.885 55.000 17.22 0.00 0.00 3.77
2585 2717 1.522806 GACACGTGCCACTCAACCA 60.523 57.895 17.22 0.00 0.00 3.67
2586 2718 1.772063 GACACGTGCCACTCAACCAC 61.772 60.000 17.22 0.00 0.00 4.16
2588 2720 4.012895 CGTGCCACTCAACCACGC 62.013 66.667 0.00 0.00 44.45 5.34
2589 2721 2.899838 GTGCCACTCAACCACGCA 60.900 61.111 0.00 0.00 0.00 5.24
2590 2722 2.591429 TGCCACTCAACCACGCAG 60.591 61.111 0.00 0.00 0.00 5.18
2591 2723 3.357079 GCCACTCAACCACGCAGG 61.357 66.667 0.00 0.00 45.67 4.85
2592 2724 2.669569 CCACTCAACCACGCAGGG 60.670 66.667 0.00 0.00 43.89 4.45
2593 2725 2.425592 CACTCAACCACGCAGGGA 59.574 61.111 0.00 0.00 43.89 4.20
2594 2726 1.669115 CACTCAACCACGCAGGGAG 60.669 63.158 0.00 0.26 43.89 4.30
2595 2727 1.837051 ACTCAACCACGCAGGGAGA 60.837 57.895 7.46 1.09 43.89 3.71
2596 2728 1.079543 CTCAACCACGCAGGGAGAG 60.080 63.158 0.00 2.48 43.89 3.20
2597 2729 2.046892 CAACCACGCAGGGAGAGG 60.047 66.667 0.00 0.00 43.89 3.69
2598 2730 3.322466 AACCACGCAGGGAGAGGG 61.322 66.667 0.00 0.00 43.89 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 1.527611 TATGGACCGGATCTCGCGT 60.528 57.895 9.46 0.00 37.59 6.01
66 67 0.237761 GACGTATGGACCGGATCTCG 59.762 60.000 9.46 7.70 38.88 4.04
67 68 0.237761 CGACGTATGGACCGGATCTC 59.762 60.000 9.46 0.00 0.00 2.75
68 69 0.179037 TCGACGTATGGACCGGATCT 60.179 55.000 9.46 0.00 0.00 2.75
75 76 1.376543 TCAGGAGTCGACGTATGGAC 58.623 55.000 10.46 5.91 33.94 4.02
76 77 1.947456 CATCAGGAGTCGACGTATGGA 59.053 52.381 10.46 6.20 0.00 3.41
77 78 1.001268 CCATCAGGAGTCGACGTATGG 60.001 57.143 10.46 14.82 36.89 2.74
78 79 1.676529 ACCATCAGGAGTCGACGTATG 59.323 52.381 10.46 10.02 38.69 2.39
79 80 2.054232 ACCATCAGGAGTCGACGTAT 57.946 50.000 10.46 0.00 38.69 3.06
80 81 1.830279 AACCATCAGGAGTCGACGTA 58.170 50.000 10.46 0.00 38.69 3.57
107 121 9.016438 CAAATCAATCCCCAAATCAAAATCTTT 57.984 29.630 0.00 0.00 0.00 2.52
120 134 5.514484 CCAAATCCAAACAAATCAATCCCCA 60.514 40.000 0.00 0.00 0.00 4.96
123 137 7.926674 AATCCAAATCCAAACAAATCAATCC 57.073 32.000 0.00 0.00 0.00 3.01
124 138 8.238631 CCAAATCCAAATCCAAACAAATCAATC 58.761 33.333 0.00 0.00 0.00 2.67
125 139 7.309316 GCCAAATCCAAATCCAAACAAATCAAT 60.309 33.333 0.00 0.00 0.00 2.57
126 140 6.016443 GCCAAATCCAAATCCAAACAAATCAA 60.016 34.615 0.00 0.00 0.00 2.57
127 141 5.472820 GCCAAATCCAAATCCAAACAAATCA 59.527 36.000 0.00 0.00 0.00 2.57
400 428 6.145048 CATCATCAGATCAATCGACAATTCGA 59.855 38.462 0.00 0.00 45.06 3.71
428 456 2.336088 GCACGCTGCAAACACCAT 59.664 55.556 0.00 0.00 44.26 3.55
588 622 1.268352 GTTCAGAGTCACACGCTCTCT 59.732 52.381 0.00 0.00 40.97 3.10
594 628 3.085443 ACTTCAGTTCAGAGTCACACG 57.915 47.619 0.00 0.00 0.00 4.49
613 679 7.821846 AGTCCATCAGATTCTCTAGTTCAAAAC 59.178 37.037 0.00 0.00 0.00 2.43
630 698 6.652481 AGTGTTGATTAGTTTCAGTCCATCAG 59.348 38.462 0.00 0.00 0.00 2.90
636 704 7.758528 ACGGTATAGTGTTGATTAGTTTCAGTC 59.241 37.037 0.00 0.00 0.00 3.51
647 715 7.497909 CCAAATTTCCTACGGTATAGTGTTGAT 59.502 37.037 0.00 0.00 0.00 2.57
649 717 6.819649 TCCAAATTTCCTACGGTATAGTGTTG 59.180 38.462 0.00 0.00 0.00 3.33
651 719 6.549433 TCCAAATTTCCTACGGTATAGTGT 57.451 37.500 0.00 0.00 0.00 3.55
656 733 6.494666 TCTCATCCAAATTTCCTACGGTAT 57.505 37.500 0.00 0.00 0.00 2.73
681 758 2.553602 GCCACAACATCACAACATCTCA 59.446 45.455 0.00 0.00 0.00 3.27
682 759 2.095059 GGCCACAACATCACAACATCTC 60.095 50.000 0.00 0.00 0.00 2.75
683 760 1.888512 GGCCACAACATCACAACATCT 59.111 47.619 0.00 0.00 0.00 2.90
684 761 1.612950 TGGCCACAACATCACAACATC 59.387 47.619 0.00 0.00 0.00 3.06
685 762 1.614903 CTGGCCACAACATCACAACAT 59.385 47.619 0.00 0.00 0.00 2.71
686 763 1.031235 CTGGCCACAACATCACAACA 58.969 50.000 0.00 0.00 0.00 3.33
687 764 1.032014 ACTGGCCACAACATCACAAC 58.968 50.000 0.00 0.00 0.00 3.32
688 765 1.031235 CACTGGCCACAACATCACAA 58.969 50.000 0.00 0.00 0.00 3.33
689 766 0.182299 TCACTGGCCACAACATCACA 59.818 50.000 0.00 0.00 0.00 3.58
690 767 1.470098 GATCACTGGCCACAACATCAC 59.530 52.381 0.00 0.00 0.00 3.06
691 768 1.352017 AGATCACTGGCCACAACATCA 59.648 47.619 0.00 0.00 0.00 3.07
692 769 2.119801 AGATCACTGGCCACAACATC 57.880 50.000 0.00 0.84 0.00 3.06
693 770 2.592102 AAGATCACTGGCCACAACAT 57.408 45.000 0.00 0.00 0.00 2.71
694 771 3.146066 GTTAAGATCACTGGCCACAACA 58.854 45.455 0.00 0.00 0.00 3.33
695 772 3.146066 TGTTAAGATCACTGGCCACAAC 58.854 45.455 0.00 0.00 0.00 3.32
696 773 3.500448 TGTTAAGATCACTGGCCACAA 57.500 42.857 0.00 0.00 0.00 3.33
697 774 3.008923 TCATGTTAAGATCACTGGCCACA 59.991 43.478 0.00 0.00 0.00 4.17
698 775 3.609853 TCATGTTAAGATCACTGGCCAC 58.390 45.455 0.00 0.00 0.00 5.01
699 776 3.519107 TCTCATGTTAAGATCACTGGCCA 59.481 43.478 4.71 4.71 0.00 5.36
700 777 4.142609 TCTCATGTTAAGATCACTGGCC 57.857 45.455 0.00 0.00 0.00 5.36
701 778 5.819379 TCATTCTCATGTTAAGATCACTGGC 59.181 40.000 0.00 0.00 0.00 4.85
702 779 7.270779 TCTCATTCTCATGTTAAGATCACTGG 58.729 38.462 0.00 0.00 0.00 4.00
703 780 8.766151 CATCTCATTCTCATGTTAAGATCACTG 58.234 37.037 0.00 0.00 0.00 3.66
704 781 7.441760 GCATCTCATTCTCATGTTAAGATCACT 59.558 37.037 0.00 0.00 0.00 3.41
745 822 9.274206 CATCATTCAACATCTCATAGTTCATCT 57.726 33.333 0.00 0.00 0.00 2.90
792 872 2.338809 TCGCCAAATCAGGGATCCTAT 58.661 47.619 12.58 0.15 29.64 2.57
798 878 1.281867 AGTGAATCGCCAAATCAGGGA 59.718 47.619 0.00 0.00 0.00 4.20
808 890 1.922570 ACGACACATAGTGAATCGCC 58.077 50.000 3.88 0.00 36.14 5.54
811 893 4.619760 TGAACGAACGACACATAGTGAATC 59.380 41.667 3.88 0.00 36.96 2.52
819 901 2.066262 GGACATGAACGAACGACACAT 58.934 47.619 0.00 1.30 0.00 3.21
841 923 2.989840 CGGAGATCGACCATTGCTAATC 59.010 50.000 11.37 0.00 42.43 1.75
872 954 2.029844 GACTGACAGGCTGAACGGC 61.030 63.158 23.66 6.64 38.75 5.68
873 955 0.034059 AAGACTGACAGGCTGAACGG 59.966 55.000 23.66 20.13 30.77 4.44
874 956 1.143305 CAAGACTGACAGGCTGAACG 58.857 55.000 23.66 10.58 30.77 3.95
875 957 1.517242 CCAAGACTGACAGGCTGAAC 58.483 55.000 23.66 14.82 30.77 3.18
876 958 0.397941 CCCAAGACTGACAGGCTGAA 59.602 55.000 23.66 8.02 30.77 3.02
877 959 2.061220 CCCAAGACTGACAGGCTGA 58.939 57.895 23.66 0.00 30.77 4.26
878 960 1.673665 GCCCAAGACTGACAGGCTG 60.674 63.158 12.78 14.16 40.57 4.85
879 961 1.495579 ATGCCCAAGACTGACAGGCT 61.496 55.000 4.48 4.48 44.19 4.58
880 962 1.001641 ATGCCCAAGACTGACAGGC 60.002 57.895 7.51 3.10 44.13 4.85
881 963 0.679002 CCATGCCCAAGACTGACAGG 60.679 60.000 7.51 0.00 0.00 4.00
882 964 1.310933 GCCATGCCCAAGACTGACAG 61.311 60.000 0.00 0.00 0.00 3.51
883 965 1.303561 GCCATGCCCAAGACTGACA 60.304 57.895 0.00 0.00 0.00 3.58
884 966 2.048603 GGCCATGCCCAAGACTGAC 61.049 63.158 0.00 0.00 44.06 3.51
885 967 2.356278 GGCCATGCCCAAGACTGA 59.644 61.111 0.00 0.00 44.06 3.41
930 1019 0.454620 CTCGTACGTGGAGTGACAGC 60.455 60.000 16.05 0.00 0.00 4.40
932 1021 0.887836 AGCTCGTACGTGGAGTGACA 60.888 55.000 16.05 0.00 34.00 3.58
933 1022 0.179194 GAGCTCGTACGTGGAGTGAC 60.179 60.000 16.05 0.00 34.00 3.67
938 1028 5.276270 GTTATTTATGAGCTCGTACGTGGA 58.724 41.667 15.35 0.00 0.00 4.02
971 1068 3.414700 CGTGCAGGAGCGTGGTTC 61.415 66.667 0.00 0.00 46.23 3.62
1007 1104 2.815647 CGCGTCCTCCTTGCTTCC 60.816 66.667 0.00 0.00 0.00 3.46
1031 1128 4.758251 CTGCCGCCATGGACGTGA 62.758 66.667 18.40 6.30 42.00 4.35
1197 1300 3.519930 GCGTCGGAGGAGAGGGAC 61.520 72.222 1.18 0.00 0.00 4.46
1356 1459 4.498520 TAGAGCTCCGTGCAGCGC 62.499 66.667 10.93 0.00 44.82 5.92
1602 1717 2.125512 AGAGTTGCCGGCGATCAC 60.126 61.111 21.90 14.55 0.00 3.06
1614 1729 0.249911 GTCTTCCACGTGGCAGAGTT 60.250 55.000 33.11 0.00 38.12 3.01
1616 1731 0.036952 ATGTCTTCCACGTGGCAGAG 60.037 55.000 33.11 25.79 38.12 3.35
1617 1732 0.037326 GATGTCTTCCACGTGGCAGA 60.037 55.000 29.70 29.70 35.12 4.26
1618 1733 1.021390 GGATGTCTTCCACGTGGCAG 61.021 60.000 30.25 28.05 44.74 4.85
1619 1734 1.003839 GGATGTCTTCCACGTGGCA 60.004 57.895 30.25 21.38 44.74 4.92
1620 1735 2.100631 CGGATGTCTTCCACGTGGC 61.101 63.158 30.25 16.11 45.78 5.01
1628 1750 0.171455 AGTCGAGCACGGATGTCTTC 59.829 55.000 3.11 0.00 40.21 2.87
1629 1751 0.109086 CAGTCGAGCACGGATGTCTT 60.109 55.000 3.11 0.00 40.21 3.01
1636 1758 0.386352 TTTACGTCAGTCGAGCACGG 60.386 55.000 13.52 0.00 42.86 4.94
1645 1767 5.106317 CCCATTGCACTTTATTTACGTCAGT 60.106 40.000 0.00 0.00 0.00 3.41
1696 1826 5.136828 TGGGTTTTATTCACTCTGCTGAAA 58.863 37.500 0.00 0.00 33.85 2.69
1699 1829 4.701651 TCATGGGTTTTATTCACTCTGCTG 59.298 41.667 0.00 0.00 0.00 4.41
1700 1830 4.922206 TCATGGGTTTTATTCACTCTGCT 58.078 39.130 0.00 0.00 0.00 4.24
1701 1831 4.702131 ACTCATGGGTTTTATTCACTCTGC 59.298 41.667 0.00 0.00 0.00 4.26
1702 1832 7.770433 TGATACTCATGGGTTTTATTCACTCTG 59.230 37.037 2.02 0.00 0.00 3.35
1703 1833 7.861629 TGATACTCATGGGTTTTATTCACTCT 58.138 34.615 2.02 0.00 0.00 3.24
1704 1834 8.506168 TTGATACTCATGGGTTTTATTCACTC 57.494 34.615 2.02 0.00 0.00 3.51
1705 1835 8.877864 TTTGATACTCATGGGTTTTATTCACT 57.122 30.769 2.02 0.00 0.00 3.41
1706 1836 8.956426 TCTTTGATACTCATGGGTTTTATTCAC 58.044 33.333 2.02 0.00 0.00 3.18
1707 1837 9.527157 TTCTTTGATACTCATGGGTTTTATTCA 57.473 29.630 2.02 0.00 0.00 2.57
1709 1839 9.753674 TCTTCTTTGATACTCATGGGTTTTATT 57.246 29.630 2.02 0.00 0.00 1.40
1710 1840 9.178758 GTCTTCTTTGATACTCATGGGTTTTAT 57.821 33.333 2.02 0.00 0.00 1.40
1711 1841 7.333423 CGTCTTCTTTGATACTCATGGGTTTTA 59.667 37.037 2.02 0.00 0.00 1.52
1712 1842 6.149474 CGTCTTCTTTGATACTCATGGGTTTT 59.851 38.462 2.02 0.00 0.00 2.43
1713 1843 5.643777 CGTCTTCTTTGATACTCATGGGTTT 59.356 40.000 2.02 0.00 0.00 3.27
1714 1844 5.046591 TCGTCTTCTTTGATACTCATGGGTT 60.047 40.000 2.02 0.00 0.00 4.11
1715 1845 4.466370 TCGTCTTCTTTGATACTCATGGGT 59.534 41.667 2.45 2.45 0.00 4.51
1716 1846 5.011090 TCGTCTTCTTTGATACTCATGGG 57.989 43.478 0.00 0.00 0.00 4.00
1717 1847 5.400782 CGATCGTCTTCTTTGATACTCATGG 59.599 44.000 7.03 0.00 0.00 3.66
1718 1848 5.974158 ACGATCGTCTTCTTTGATACTCATG 59.026 40.000 16.60 0.00 0.00 3.07
1719 1849 5.974158 CACGATCGTCTTCTTTGATACTCAT 59.026 40.000 19.84 0.00 0.00 2.90
1720 1850 5.123344 TCACGATCGTCTTCTTTGATACTCA 59.877 40.000 19.84 0.00 0.00 3.41
1721 1851 5.570344 TCACGATCGTCTTCTTTGATACTC 58.430 41.667 19.84 0.00 0.00 2.59
1722 1852 5.562506 TCACGATCGTCTTCTTTGATACT 57.437 39.130 19.84 0.00 0.00 2.12
1723 1853 9.608617 TTATATCACGATCGTCTTCTTTGATAC 57.391 33.333 19.84 0.00 0.00 2.24
1725 1855 9.529325 TTTTATATCACGATCGTCTTCTTTGAT 57.471 29.630 19.84 17.59 0.00 2.57
1726 1856 8.920509 TTTTATATCACGATCGTCTTCTTTGA 57.079 30.769 19.84 11.32 0.00 2.69
1727 1857 9.573102 CATTTTATATCACGATCGTCTTCTTTG 57.427 33.333 19.84 5.47 0.00 2.77
1728 1858 9.314321 ACATTTTATATCACGATCGTCTTCTTT 57.686 29.630 19.84 4.07 0.00 2.52
1729 1859 8.873215 ACATTTTATATCACGATCGTCTTCTT 57.127 30.769 19.84 5.17 0.00 2.52
1730 1860 9.961265 TTACATTTTATATCACGATCGTCTTCT 57.039 29.630 19.84 6.47 0.00 2.85
1756 1886 8.943002 CCGTATCACTTTTTCCTAAGTACATTT 58.057 33.333 0.00 0.00 36.24 2.32
1757 1887 7.065443 GCCGTATCACTTTTTCCTAAGTACATT 59.935 37.037 0.00 0.00 36.24 2.71
1758 1888 6.537660 GCCGTATCACTTTTTCCTAAGTACAT 59.462 38.462 0.00 0.00 36.24 2.29
1759 1889 5.870978 GCCGTATCACTTTTTCCTAAGTACA 59.129 40.000 0.00 0.00 36.24 2.90
1760 1890 6.104665 AGCCGTATCACTTTTTCCTAAGTAC 58.895 40.000 0.00 0.00 36.24 2.73
1761 1891 6.290294 AGCCGTATCACTTTTTCCTAAGTA 57.710 37.500 0.00 0.00 36.24 2.24
1762 1892 5.161943 AGCCGTATCACTTTTTCCTAAGT 57.838 39.130 0.00 0.00 38.87 2.24
1763 1893 7.280205 ACATTAGCCGTATCACTTTTTCCTAAG 59.720 37.037 0.00 0.00 0.00 2.18
1764 1894 7.107542 ACATTAGCCGTATCACTTTTTCCTAA 58.892 34.615 0.00 0.00 0.00 2.69
1765 1895 6.646267 ACATTAGCCGTATCACTTTTTCCTA 58.354 36.000 0.00 0.00 0.00 2.94
1766 1896 5.497474 ACATTAGCCGTATCACTTTTTCCT 58.503 37.500 0.00 0.00 0.00 3.36
1767 1897 5.585047 AGACATTAGCCGTATCACTTTTTCC 59.415 40.000 0.00 0.00 0.00 3.13
1768 1898 6.663944 AGACATTAGCCGTATCACTTTTTC 57.336 37.500 0.00 0.00 0.00 2.29
1769 1899 7.328737 AGTAGACATTAGCCGTATCACTTTTT 58.671 34.615 0.00 0.00 0.00 1.94
1770 1900 6.875076 AGTAGACATTAGCCGTATCACTTTT 58.125 36.000 0.00 0.00 0.00 2.27
1771 1901 6.466885 AGTAGACATTAGCCGTATCACTTT 57.533 37.500 0.00 0.00 0.00 2.66
1772 1902 6.207025 CCTAGTAGACATTAGCCGTATCACTT 59.793 42.308 0.00 0.00 0.00 3.16
1773 1903 5.706369 CCTAGTAGACATTAGCCGTATCACT 59.294 44.000 0.00 0.00 0.00 3.41
1774 1904 5.106237 CCCTAGTAGACATTAGCCGTATCAC 60.106 48.000 0.00 0.00 0.00 3.06
1775 1905 5.008331 CCCTAGTAGACATTAGCCGTATCA 58.992 45.833 0.00 0.00 0.00 2.15
1776 1906 4.398673 CCCCTAGTAGACATTAGCCGTATC 59.601 50.000 0.00 0.00 0.00 2.24
1777 1907 4.043812 TCCCCTAGTAGACATTAGCCGTAT 59.956 45.833 0.00 0.00 0.00 3.06
1778 1908 3.395607 TCCCCTAGTAGACATTAGCCGTA 59.604 47.826 0.00 0.00 0.00 4.02
1779 1909 2.176364 TCCCCTAGTAGACATTAGCCGT 59.824 50.000 0.00 0.00 0.00 5.68
1780 1910 2.872732 TCCCCTAGTAGACATTAGCCG 58.127 52.381 0.00 0.00 0.00 5.52
1781 1911 3.055747 GCATCCCCTAGTAGACATTAGCC 60.056 52.174 0.00 0.00 0.00 3.93
1782 1912 3.835395 AGCATCCCCTAGTAGACATTAGC 59.165 47.826 0.00 0.00 0.00 3.09
1783 1913 6.097554 CCATAGCATCCCCTAGTAGACATTAG 59.902 46.154 0.00 0.00 0.00 1.73
1784 1914 5.958380 CCATAGCATCCCCTAGTAGACATTA 59.042 44.000 0.00 0.00 0.00 1.90
1785 1915 4.780021 CCATAGCATCCCCTAGTAGACATT 59.220 45.833 0.00 0.00 0.00 2.71
1786 1916 4.357325 CCATAGCATCCCCTAGTAGACAT 58.643 47.826 0.00 0.00 0.00 3.06
1787 1917 3.502303 CCCATAGCATCCCCTAGTAGACA 60.502 52.174 0.00 0.00 0.00 3.41
1788 1918 3.100671 CCCATAGCATCCCCTAGTAGAC 58.899 54.545 0.00 0.00 0.00 2.59
1789 1919 2.559931 GCCCATAGCATCCCCTAGTAGA 60.560 54.545 0.00 0.00 42.97 2.59
1790 1920 1.834263 GCCCATAGCATCCCCTAGTAG 59.166 57.143 0.00 0.00 42.97 2.57
1791 1921 1.554822 GGCCCATAGCATCCCCTAGTA 60.555 57.143 0.00 0.00 46.50 1.82
1792 1922 0.842467 GGCCCATAGCATCCCCTAGT 60.842 60.000 0.00 0.00 46.50 2.57
1793 1923 1.903877 CGGCCCATAGCATCCCCTAG 61.904 65.000 0.00 0.00 46.50 3.02
1794 1924 1.918293 CGGCCCATAGCATCCCCTA 60.918 63.158 0.00 0.00 46.50 3.53
1795 1925 3.252284 CGGCCCATAGCATCCCCT 61.252 66.667 0.00 0.00 46.50 4.79
1796 1926 3.133365 AACGGCCCATAGCATCCCC 62.133 63.158 0.00 0.00 46.50 4.81
1797 1927 1.600916 GAACGGCCCATAGCATCCC 60.601 63.158 0.00 0.00 46.50 3.85
1798 1928 0.465460 TTGAACGGCCCATAGCATCC 60.465 55.000 0.00 0.00 46.50 3.51
1799 1929 1.609208 ATTGAACGGCCCATAGCATC 58.391 50.000 0.00 0.00 46.50 3.91
1800 1930 2.071778 AATTGAACGGCCCATAGCAT 57.928 45.000 0.00 0.00 46.50 3.79
1801 1931 1.748493 GAAATTGAACGGCCCATAGCA 59.252 47.619 0.00 0.00 46.50 3.49
1802 1932 2.024414 AGAAATTGAACGGCCCATAGC 58.976 47.619 0.00 0.00 42.60 2.97
1803 1933 2.618709 GGAGAAATTGAACGGCCCATAG 59.381 50.000 0.00 0.00 0.00 2.23
1804 1934 2.650322 GGAGAAATTGAACGGCCCATA 58.350 47.619 0.00 0.00 0.00 2.74
1805 1935 1.474330 GGAGAAATTGAACGGCCCAT 58.526 50.000 0.00 0.00 0.00 4.00
1806 1936 0.958382 CGGAGAAATTGAACGGCCCA 60.958 55.000 0.00 0.00 0.00 5.36
1807 1937 1.800681 CGGAGAAATTGAACGGCCC 59.199 57.895 0.00 0.00 0.00 5.80
1808 1938 1.136774 GCGGAGAAATTGAACGGCC 59.863 57.895 0.00 0.00 0.00 6.13
1809 1939 1.365699 TAGCGGAGAAATTGAACGGC 58.634 50.000 0.00 0.00 0.00 5.68
1810 1940 3.001330 GTCATAGCGGAGAAATTGAACGG 59.999 47.826 0.00 0.00 0.00 4.44
1811 1941 3.001330 GGTCATAGCGGAGAAATTGAACG 59.999 47.826 0.00 0.00 0.00 3.95
1812 1942 3.938963 TGGTCATAGCGGAGAAATTGAAC 59.061 43.478 0.00 0.00 0.00 3.18
1813 1943 3.938963 GTGGTCATAGCGGAGAAATTGAA 59.061 43.478 0.00 0.00 0.00 2.69
1814 1944 3.531538 GTGGTCATAGCGGAGAAATTGA 58.468 45.455 0.00 0.00 0.00 2.57
1815 1945 2.614057 GGTGGTCATAGCGGAGAAATTG 59.386 50.000 0.00 0.00 0.00 2.32
1816 1946 2.505819 AGGTGGTCATAGCGGAGAAATT 59.494 45.455 0.00 0.00 0.00 1.82
1817 1947 2.119495 AGGTGGTCATAGCGGAGAAAT 58.881 47.619 0.00 0.00 0.00 2.17
1818 1948 1.568504 AGGTGGTCATAGCGGAGAAA 58.431 50.000 0.00 0.00 0.00 2.52
1819 1949 2.307768 CTAGGTGGTCATAGCGGAGAA 58.692 52.381 0.00 0.00 0.00 2.87
1820 1950 1.982660 CTAGGTGGTCATAGCGGAGA 58.017 55.000 0.00 0.00 0.00 3.71
1821 1951 0.315568 GCTAGGTGGTCATAGCGGAG 59.684 60.000 0.00 0.00 42.51 4.63
1822 1952 2.426651 GCTAGGTGGTCATAGCGGA 58.573 57.895 0.00 0.00 42.51 5.54
1825 1955 0.744874 TGTCGCTAGGTGGTCATAGC 59.255 55.000 2.46 2.46 46.37 2.97
1826 1956 3.735237 ATTGTCGCTAGGTGGTCATAG 57.265 47.619 0.00 0.00 0.00 2.23
1827 1957 4.403113 TGTAATTGTCGCTAGGTGGTCATA 59.597 41.667 0.00 0.00 0.00 2.15
1828 1958 3.196901 TGTAATTGTCGCTAGGTGGTCAT 59.803 43.478 0.00 0.00 0.00 3.06
1829 1959 2.563620 TGTAATTGTCGCTAGGTGGTCA 59.436 45.455 0.00 0.00 0.00 4.02
1846 1976 3.064207 CGGCTTACTTCAGTGCTTGTAA 58.936 45.455 0.00 0.00 0.00 2.41
1905 2035 2.371306 AGTACAACAAGTTTTGCCCGT 58.629 42.857 0.00 0.00 0.00 5.28
1924 2055 2.229062 TGACGACTTCTCAACTGCCTAG 59.771 50.000 0.00 0.00 0.00 3.02
1954 2085 1.452108 GTGTGCTGGTCCTATGGGC 60.452 63.158 0.00 0.00 0.00 5.36
2003 2134 7.234355 ACAAGTTGGATCCTTCTGAACTAAAT 58.766 34.615 14.23 0.78 29.72 1.40
2004 2135 6.601332 ACAAGTTGGATCCTTCTGAACTAAA 58.399 36.000 14.23 0.00 29.72 1.85
2009 2140 5.306937 TGTCTACAAGTTGGATCCTTCTGAA 59.693 40.000 14.23 0.00 0.00 3.02
2041 2172 1.213013 CTGGTCTCCGTTCGTCCAG 59.787 63.158 0.00 0.00 39.41 3.86
2043 2174 0.531200 AATCTGGTCTCCGTTCGTCC 59.469 55.000 0.00 0.00 0.00 4.79
2052 2183 3.131223 TGGATCAACTCGAATCTGGTCTC 59.869 47.826 0.00 0.00 0.00 3.36
2062 2193 2.158885 TGTGTTTGGTGGATCAACTCGA 60.159 45.455 0.00 0.00 0.00 4.04
2064 2195 3.632145 AGTTGTGTTTGGTGGATCAACTC 59.368 43.478 0.00 0.00 40.52 3.01
2065 2196 3.631250 AGTTGTGTTTGGTGGATCAACT 58.369 40.909 0.00 0.00 39.98 3.16
2068 2199 4.133820 CAGTAGTTGTGTTTGGTGGATCA 58.866 43.478 0.00 0.00 0.00 2.92
2085 2216 2.672961 TCGCAAGATTGGGTCAGTAG 57.327 50.000 9.15 0.00 45.01 2.57
2118 2249 0.757935 GGAGGGCGTATGGAGGTGTA 60.758 60.000 0.00 0.00 0.00 2.90
2128 2259 2.874648 TAGCTTCGTCGGAGGGCGTA 62.875 60.000 1.96 0.00 0.00 4.42
2150 2281 0.946221 GCCCTAGTTCCGATGATGCG 60.946 60.000 0.00 0.00 0.00 4.73
2157 2288 1.389609 CCGCTTAGCCCTAGTTCCGA 61.390 60.000 0.00 0.00 0.00 4.55
2161 2292 1.002533 TCCCCGCTTAGCCCTAGTT 59.997 57.895 0.00 0.00 0.00 2.24
2164 2295 1.047034 GTTCTCCCCGCTTAGCCCTA 61.047 60.000 0.00 0.00 0.00 3.53
2165 2296 2.040606 TTCTCCCCGCTTAGCCCT 59.959 61.111 0.00 0.00 0.00 5.19
2172 2303 1.913419 TGGAATAAAGTTCTCCCCGCT 59.087 47.619 0.00 0.00 0.00 5.52
2210 2341 0.321346 TGCTCACAAAGGCGAGATGA 59.679 50.000 0.00 0.00 0.00 2.92
2212 2343 0.392193 CCTGCTCACAAAGGCGAGAT 60.392 55.000 0.00 0.00 0.00 2.75
2223 2354 2.094762 ACGGTTTATGTCCTGCTCAC 57.905 50.000 0.00 0.00 0.00 3.51
2309 2441 0.998928 TGTGTCATTAGGGGCATGGT 59.001 50.000 0.00 0.00 0.00 3.55
2315 2447 3.370953 CCTTTCTCCTGTGTCATTAGGGG 60.371 52.174 6.33 3.58 35.81 4.79
2322 2454 2.689658 TCTTCCCTTTCTCCTGTGTCA 58.310 47.619 0.00 0.00 0.00 3.58
2334 2466 0.693049 AGCGACACCAATCTTCCCTT 59.307 50.000 0.00 0.00 0.00 3.95
2335 2467 0.036010 CAGCGACACCAATCTTCCCT 60.036 55.000 0.00 0.00 0.00 4.20
2336 2468 0.321653 ACAGCGACACCAATCTTCCC 60.322 55.000 0.00 0.00 0.00 3.97
2337 2469 1.079503 GACAGCGACACCAATCTTCC 58.920 55.000 0.00 0.00 0.00 3.46
2338 2470 1.795768 TGACAGCGACACCAATCTTC 58.204 50.000 0.00 0.00 0.00 2.87
2339 2471 2.254546 TTGACAGCGACACCAATCTT 57.745 45.000 0.00 0.00 0.00 2.40
2340 2472 2.350522 GATTGACAGCGACACCAATCT 58.649 47.619 0.00 0.00 40.77 2.40
2341 2473 1.061131 CGATTGACAGCGACACCAATC 59.939 52.381 0.00 0.00 40.63 2.67
2342 2474 1.078709 CGATTGACAGCGACACCAAT 58.921 50.000 0.00 0.00 32.54 3.16
2343 2475 0.032815 TCGATTGACAGCGACACCAA 59.967 50.000 0.00 0.00 0.00 3.67
2344 2476 0.246360 ATCGATTGACAGCGACACCA 59.754 50.000 4.87 0.00 39.56 4.17
2345 2477 0.647410 CATCGATTGACAGCGACACC 59.353 55.000 0.00 0.00 39.56 4.16
2346 2478 0.647410 CCATCGATTGACAGCGACAC 59.353 55.000 0.00 0.00 39.56 3.67
2347 2479 0.460109 CCCATCGATTGACAGCGACA 60.460 55.000 0.00 0.00 39.56 4.35
2348 2480 0.179111 TCCCATCGATTGACAGCGAC 60.179 55.000 0.00 0.00 39.56 5.19
2349 2481 0.752658 ATCCCATCGATTGACAGCGA 59.247 50.000 0.00 5.19 41.14 4.93
2350 2482 0.863799 CATCCCATCGATTGACAGCG 59.136 55.000 0.00 0.00 0.00 5.18
2351 2483 0.590195 GCATCCCATCGATTGACAGC 59.410 55.000 0.00 0.49 0.00 4.40
2352 2484 1.233019 GGCATCCCATCGATTGACAG 58.767 55.000 0.00 0.00 0.00 3.51
2353 2485 0.532640 CGGCATCCCATCGATTGACA 60.533 55.000 0.00 0.00 0.00 3.58
2354 2486 1.230635 CCGGCATCCCATCGATTGAC 61.231 60.000 0.00 0.00 0.00 3.18
2355 2487 1.071299 CCGGCATCCCATCGATTGA 59.929 57.895 0.00 0.00 0.00 2.57
2356 2488 0.534877 TTCCGGCATCCCATCGATTG 60.535 55.000 0.00 0.00 0.00 2.67
2357 2489 0.535102 GTTCCGGCATCCCATCGATT 60.535 55.000 0.00 0.00 0.00 3.34
2358 2490 1.071471 GTTCCGGCATCCCATCGAT 59.929 57.895 0.00 0.00 0.00 3.59
2359 2491 2.504032 GTTCCGGCATCCCATCGA 59.496 61.111 0.00 0.00 0.00 3.59
2360 2492 2.591715 GGTTCCGGCATCCCATCG 60.592 66.667 0.00 0.00 0.00 3.84
2361 2493 1.415672 TAGGGTTCCGGCATCCCATC 61.416 60.000 23.45 4.39 43.31 3.51
2362 2494 1.385347 TAGGGTTCCGGCATCCCAT 60.385 57.895 23.45 14.23 43.31 4.00
2363 2495 2.041430 TAGGGTTCCGGCATCCCA 59.959 61.111 23.45 0.00 43.31 4.37
2364 2496 2.041206 GACTAGGGTTCCGGCATCCC 62.041 65.000 17.00 17.00 41.36 3.85
2365 2497 1.446366 GACTAGGGTTCCGGCATCC 59.554 63.158 0.00 0.00 0.00 3.51
2366 2498 1.067582 CGACTAGGGTTCCGGCATC 59.932 63.158 0.00 0.00 0.00 3.91
2367 2499 3.090219 GCGACTAGGGTTCCGGCAT 62.090 63.158 0.00 0.00 0.00 4.40
2368 2500 3.766691 GCGACTAGGGTTCCGGCA 61.767 66.667 0.00 0.00 0.00 5.69
2369 2501 4.525949 GGCGACTAGGGTTCCGGC 62.526 72.222 0.00 0.00 40.15 6.13
2370 2502 2.758737 AGGCGACTAGGGTTCCGG 60.759 66.667 0.00 0.00 40.61 5.14
2371 2503 1.885163 AACAGGCGACTAGGGTTCCG 61.885 60.000 0.00 0.00 40.21 4.30
2372 2504 0.108281 GAACAGGCGACTAGGGTTCC 60.108 60.000 8.44 0.00 40.21 3.62
2373 2505 0.108281 GGAACAGGCGACTAGGGTTC 60.108 60.000 10.71 10.71 40.21 3.62
2374 2506 1.551019 GGGAACAGGCGACTAGGGTT 61.551 60.000 0.00 0.00 40.21 4.11
2375 2507 1.988406 GGGAACAGGCGACTAGGGT 60.988 63.158 0.00 0.00 40.21 4.34
2376 2508 1.265454 AAGGGAACAGGCGACTAGGG 61.265 60.000 0.00 0.00 40.21 3.53
2377 2509 0.108138 CAAGGGAACAGGCGACTAGG 60.108 60.000 0.00 0.00 40.21 3.02
2378 2510 0.895530 TCAAGGGAACAGGCGACTAG 59.104 55.000 0.00 0.00 40.21 2.57
2379 2511 1.275291 CTTCAAGGGAACAGGCGACTA 59.725 52.381 0.00 0.00 40.21 2.59
2380 2512 0.035458 CTTCAAGGGAACAGGCGACT 59.965 55.000 0.00 0.00 46.44 4.18
2381 2513 0.955919 CCTTCAAGGGAACAGGCGAC 60.956 60.000 0.00 0.00 0.00 5.19
2382 2514 1.125093 TCCTTCAAGGGAACAGGCGA 61.125 55.000 2.75 0.00 35.59 5.54
2383 2515 0.674895 CTCCTTCAAGGGAACAGGCG 60.675 60.000 2.75 0.00 35.59 5.52
2384 2516 0.693049 TCTCCTTCAAGGGAACAGGC 59.307 55.000 2.75 0.00 35.59 4.85
2385 2517 2.027653 GTCTCTCCTTCAAGGGAACAGG 60.028 54.545 2.75 0.00 35.59 4.00
2386 2518 2.353208 CGTCTCTCCTTCAAGGGAACAG 60.353 54.545 2.75 0.00 35.59 3.16
2387 2519 1.618837 CGTCTCTCCTTCAAGGGAACA 59.381 52.381 2.75 0.00 35.59 3.18
2388 2520 1.893801 TCGTCTCTCCTTCAAGGGAAC 59.106 52.381 2.75 0.00 35.59 3.62
2389 2521 2.171840 CTCGTCTCTCCTTCAAGGGAA 58.828 52.381 2.75 0.00 35.59 3.97
2390 2522 1.617263 CCTCGTCTCTCCTTCAAGGGA 60.617 57.143 2.75 0.00 35.59 4.20
2391 2523 0.820871 CCTCGTCTCTCCTTCAAGGG 59.179 60.000 2.75 0.00 35.59 3.95
2392 2524 0.820871 CCCTCGTCTCTCCTTCAAGG 59.179 60.000 0.00 0.00 36.46 3.61
2393 2525 0.820871 CCCCTCGTCTCTCCTTCAAG 59.179 60.000 0.00 0.00 0.00 3.02
2394 2526 0.408309 TCCCCTCGTCTCTCCTTCAA 59.592 55.000 0.00 0.00 0.00 2.69
2395 2527 0.631753 ATCCCCTCGTCTCTCCTTCA 59.368 55.000 0.00 0.00 0.00 3.02
2396 2528 1.036707 CATCCCCTCGTCTCTCCTTC 58.963 60.000 0.00 0.00 0.00 3.46
2397 2529 0.631753 TCATCCCCTCGTCTCTCCTT 59.368 55.000 0.00 0.00 0.00 3.36
2398 2530 0.184933 CTCATCCCCTCGTCTCTCCT 59.815 60.000 0.00 0.00 0.00 3.69
2399 2531 0.183971 TCTCATCCCCTCGTCTCTCC 59.816 60.000 0.00 0.00 0.00 3.71
2400 2532 1.604604 CTCTCATCCCCTCGTCTCTC 58.395 60.000 0.00 0.00 0.00 3.20
2401 2533 0.184933 CCTCTCATCCCCTCGTCTCT 59.815 60.000 0.00 0.00 0.00 3.10
2402 2534 1.460273 GCCTCTCATCCCCTCGTCTC 61.460 65.000 0.00 0.00 0.00 3.36
2403 2535 1.456705 GCCTCTCATCCCCTCGTCT 60.457 63.158 0.00 0.00 0.00 4.18
2404 2536 2.851071 CGCCTCTCATCCCCTCGTC 61.851 68.421 0.00 0.00 0.00 4.20
2405 2537 2.835431 CGCCTCTCATCCCCTCGT 60.835 66.667 0.00 0.00 0.00 4.18
2406 2538 4.292178 GCGCCTCTCATCCCCTCG 62.292 72.222 0.00 0.00 0.00 4.63
2407 2539 4.292178 CGCGCCTCTCATCCCCTC 62.292 72.222 0.00 0.00 0.00 4.30
2408 2540 3.733507 TACGCGCCTCTCATCCCCT 62.734 63.158 5.73 0.00 0.00 4.79
2409 2541 2.574955 ATACGCGCCTCTCATCCCC 61.575 63.158 5.73 0.00 0.00 4.81
2410 2542 1.373497 CATACGCGCCTCTCATCCC 60.373 63.158 5.73 0.00 0.00 3.85
2411 2543 0.387878 CTCATACGCGCCTCTCATCC 60.388 60.000 5.73 0.00 0.00 3.51
2412 2544 0.593618 TCTCATACGCGCCTCTCATC 59.406 55.000 5.73 0.00 0.00 2.92
2413 2545 0.595588 CTCTCATACGCGCCTCTCAT 59.404 55.000 5.73 0.00 0.00 2.90
2414 2546 2.025719 CTCTCATACGCGCCTCTCA 58.974 57.895 5.73 0.00 0.00 3.27
2415 2547 1.371145 GCTCTCATACGCGCCTCTC 60.371 63.158 5.73 0.00 0.00 3.20
2416 2548 1.667154 TTGCTCTCATACGCGCCTCT 61.667 55.000 5.73 0.00 0.00 3.69
2417 2549 1.226974 TTGCTCTCATACGCGCCTC 60.227 57.895 5.73 0.00 0.00 4.70
2418 2550 1.519455 GTTGCTCTCATACGCGCCT 60.519 57.895 5.73 0.00 0.00 5.52
2419 2551 2.526120 GGTTGCTCTCATACGCGCC 61.526 63.158 5.73 0.00 0.00 6.53
2420 2552 1.154205 ATGGTTGCTCTCATACGCGC 61.154 55.000 5.73 0.00 0.00 6.86
2421 2553 1.787155 GTATGGTTGCTCTCATACGCG 59.213 52.381 3.53 3.53 37.19 6.01
2422 2554 2.821546 TGTATGGTTGCTCTCATACGC 58.178 47.619 14.37 0.00 45.05 4.42
2423 2555 4.180817 TGTTGTATGGTTGCTCTCATACG 58.819 43.478 14.37 0.00 45.05 3.06
2424 2556 5.643777 AGTTGTTGTATGGTTGCTCTCATAC 59.356 40.000 13.23 13.23 43.42 2.39
2425 2557 5.804639 AGTTGTTGTATGGTTGCTCTCATA 58.195 37.500 0.00 0.00 0.00 2.15
2426 2558 4.655963 AGTTGTTGTATGGTTGCTCTCAT 58.344 39.130 0.00 0.00 0.00 2.90
2427 2559 4.085357 AGTTGTTGTATGGTTGCTCTCA 57.915 40.909 0.00 0.00 0.00 3.27
2428 2560 4.093556 GCTAGTTGTTGTATGGTTGCTCTC 59.906 45.833 0.00 0.00 0.00 3.20
2429 2561 4.003648 GCTAGTTGTTGTATGGTTGCTCT 58.996 43.478 0.00 0.00 0.00 4.09
2430 2562 3.181520 CGCTAGTTGTTGTATGGTTGCTC 60.182 47.826 0.00 0.00 0.00 4.26
2431 2563 2.742053 CGCTAGTTGTTGTATGGTTGCT 59.258 45.455 0.00 0.00 0.00 3.91
2432 2564 2.739913 TCGCTAGTTGTTGTATGGTTGC 59.260 45.455 0.00 0.00 0.00 4.17
2433 2565 5.545658 ATTCGCTAGTTGTTGTATGGTTG 57.454 39.130 0.00 0.00 0.00 3.77
2434 2566 5.293569 GCTATTCGCTAGTTGTTGTATGGTT 59.706 40.000 0.00 0.00 35.14 3.67
2435 2567 4.809426 GCTATTCGCTAGTTGTTGTATGGT 59.191 41.667 0.00 0.00 35.14 3.55
2436 2568 4.085055 CGCTATTCGCTAGTTGTTGTATGG 60.085 45.833 0.00 0.00 36.13 2.74
2437 2569 4.738252 TCGCTATTCGCTAGTTGTTGTATG 59.262 41.667 0.00 0.00 38.27 2.39
2438 2570 4.928601 TCGCTATTCGCTAGTTGTTGTAT 58.071 39.130 0.00 0.00 38.27 2.29
2439 2571 4.359971 TCGCTATTCGCTAGTTGTTGTA 57.640 40.909 0.00 0.00 38.27 2.41
2440 2572 3.226346 TCGCTATTCGCTAGTTGTTGT 57.774 42.857 0.00 0.00 38.27 3.32
2441 2573 4.778842 ATTCGCTATTCGCTAGTTGTTG 57.221 40.909 0.00 0.00 38.27 3.33
2442 2574 8.080417 TCTTATATTCGCTATTCGCTAGTTGTT 58.920 33.333 0.00 0.00 38.27 2.83
2443 2575 7.591165 TCTTATATTCGCTATTCGCTAGTTGT 58.409 34.615 0.00 0.00 38.27 3.32
2444 2576 8.621921 ATCTTATATTCGCTATTCGCTAGTTG 57.378 34.615 0.00 0.00 38.27 3.16
2445 2577 9.938670 CTATCTTATATTCGCTATTCGCTAGTT 57.061 33.333 0.00 0.00 38.27 2.24
2446 2578 8.071368 GCTATCTTATATTCGCTATTCGCTAGT 58.929 37.037 0.00 0.00 38.27 2.57
2447 2579 8.286800 AGCTATCTTATATTCGCTATTCGCTAG 58.713 37.037 0.00 0.00 38.27 3.42
2448 2580 8.155821 AGCTATCTTATATTCGCTATTCGCTA 57.844 34.615 0.00 0.00 38.27 4.26
2449 2581 7.033530 AGCTATCTTATATTCGCTATTCGCT 57.966 36.000 0.00 0.00 38.27 4.93
2450 2582 7.687005 AAGCTATCTTATATTCGCTATTCGC 57.313 36.000 0.00 0.00 38.27 4.70
2465 2597 8.942338 TCACATCACGTTTAATAAGCTATCTT 57.058 30.769 0.00 0.00 36.35 2.40
2466 2598 8.942338 TTCACATCACGTTTAATAAGCTATCT 57.058 30.769 0.00 0.00 0.00 1.98
2467 2599 9.982291 TTTTCACATCACGTTTAATAAGCTATC 57.018 29.630 0.00 0.00 0.00 2.08
2476 2608 9.790389 ACAACTTTATTTTCACATCACGTTTAA 57.210 25.926 0.00 0.00 0.00 1.52
2477 2609 9.227490 CACAACTTTATTTTCACATCACGTTTA 57.773 29.630 0.00 0.00 0.00 2.01
2478 2610 7.253950 GCACAACTTTATTTTCACATCACGTTT 60.254 33.333 0.00 0.00 0.00 3.60
2479 2611 6.198216 GCACAACTTTATTTTCACATCACGTT 59.802 34.615 0.00 0.00 0.00 3.99
2480 2612 5.685511 GCACAACTTTATTTTCACATCACGT 59.314 36.000 0.00 0.00 0.00 4.49
2481 2613 5.116983 GGCACAACTTTATTTTCACATCACG 59.883 40.000 0.00 0.00 0.00 4.35
2482 2614 5.982516 TGGCACAACTTTATTTTCACATCAC 59.017 36.000 0.00 0.00 31.92 3.06
2483 2615 6.154203 TGGCACAACTTTATTTTCACATCA 57.846 33.333 0.00 0.00 31.92 3.07
2501 2633 9.076596 GTATTCACTTCTTTTAATCAATGGCAC 57.923 33.333 0.00 0.00 0.00 5.01
2502 2634 8.801299 TGTATTCACTTCTTTTAATCAATGGCA 58.199 29.630 0.00 0.00 0.00 4.92
2503 2635 9.638239 TTGTATTCACTTCTTTTAATCAATGGC 57.362 29.630 0.00 0.00 0.00 4.40
2507 2639 8.581578 GGGGTTGTATTCACTTCTTTTAATCAA 58.418 33.333 0.00 0.00 0.00 2.57
2508 2640 7.177744 GGGGGTTGTATTCACTTCTTTTAATCA 59.822 37.037 0.00 0.00 0.00 2.57
2509 2641 7.177744 TGGGGGTTGTATTCACTTCTTTTAATC 59.822 37.037 0.00 0.00 0.00 1.75
2510 2642 7.013834 TGGGGGTTGTATTCACTTCTTTTAAT 58.986 34.615 0.00 0.00 0.00 1.40
2511 2643 6.374588 TGGGGGTTGTATTCACTTCTTTTAA 58.625 36.000 0.00 0.00 0.00 1.52
2512 2644 5.954757 TGGGGGTTGTATTCACTTCTTTTA 58.045 37.500 0.00 0.00 0.00 1.52
2513 2645 4.810345 TGGGGGTTGTATTCACTTCTTTT 58.190 39.130 0.00 0.00 0.00 2.27
2514 2646 4.463050 TGGGGGTTGTATTCACTTCTTT 57.537 40.909 0.00 0.00 0.00 2.52
2515 2647 4.149598 GTTGGGGGTTGTATTCACTTCTT 58.850 43.478 0.00 0.00 0.00 2.52
2516 2648 3.139397 TGTTGGGGGTTGTATTCACTTCT 59.861 43.478 0.00 0.00 0.00 2.85
2517 2649 3.492337 TGTTGGGGGTTGTATTCACTTC 58.508 45.455 0.00 0.00 0.00 3.01
2518 2650 3.603965 TGTTGGGGGTTGTATTCACTT 57.396 42.857 0.00 0.00 0.00 3.16
2519 2651 3.496331 CTTGTTGGGGGTTGTATTCACT 58.504 45.455 0.00 0.00 0.00 3.41
2520 2652 2.560981 CCTTGTTGGGGGTTGTATTCAC 59.439 50.000 0.00 0.00 0.00 3.18
2521 2653 2.447429 TCCTTGTTGGGGGTTGTATTCA 59.553 45.455 0.00 0.00 36.20 2.57
2522 2654 2.823747 GTCCTTGTTGGGGGTTGTATTC 59.176 50.000 0.00 0.00 36.20 1.75
2523 2655 2.492010 GGTCCTTGTTGGGGGTTGTATT 60.492 50.000 0.00 0.00 36.20 1.89
2524 2656 1.076513 GGTCCTTGTTGGGGGTTGTAT 59.923 52.381 0.00 0.00 36.20 2.29
2525 2657 0.479378 GGTCCTTGTTGGGGGTTGTA 59.521 55.000 0.00 0.00 36.20 2.41
2526 2658 1.231928 GGTCCTTGTTGGGGGTTGT 59.768 57.895 0.00 0.00 36.20 3.32
2527 2659 0.178935 ATGGTCCTTGTTGGGGGTTG 60.179 55.000 0.00 0.00 36.20 3.77
2528 2660 1.462426 TATGGTCCTTGTTGGGGGTT 58.538 50.000 0.00 0.00 36.20 4.11
2529 2661 1.693799 ATATGGTCCTTGTTGGGGGT 58.306 50.000 0.00 0.00 36.20 4.95
2530 2662 2.846665 AATATGGTCCTTGTTGGGGG 57.153 50.000 0.00 0.00 36.20 5.40
2531 2663 4.243793 TGTAATATGGTCCTTGTTGGGG 57.756 45.455 0.00 0.00 36.20 4.96
2532 2664 5.505780 TCTTGTAATATGGTCCTTGTTGGG 58.494 41.667 0.00 0.00 36.20 4.12
2533 2665 5.066505 GCTCTTGTAATATGGTCCTTGTTGG 59.933 44.000 0.00 0.00 37.10 3.77
2534 2666 5.220662 CGCTCTTGTAATATGGTCCTTGTTG 60.221 44.000 0.00 0.00 0.00 3.33
2535 2667 4.876107 CGCTCTTGTAATATGGTCCTTGTT 59.124 41.667 0.00 0.00 0.00 2.83
2536 2668 4.442706 CGCTCTTGTAATATGGTCCTTGT 58.557 43.478 0.00 0.00 0.00 3.16
2537 2669 3.248602 GCGCTCTTGTAATATGGTCCTTG 59.751 47.826 0.00 0.00 0.00 3.61
2538 2670 3.467803 GCGCTCTTGTAATATGGTCCTT 58.532 45.455 0.00 0.00 0.00 3.36
2539 2671 2.224305 GGCGCTCTTGTAATATGGTCCT 60.224 50.000 7.64 0.00 0.00 3.85
2540 2672 2.143925 GGCGCTCTTGTAATATGGTCC 58.856 52.381 7.64 0.00 0.00 4.46
2541 2673 2.143925 GGGCGCTCTTGTAATATGGTC 58.856 52.381 7.64 0.00 0.00 4.02
2542 2674 1.202770 GGGGCGCTCTTGTAATATGGT 60.203 52.381 7.48 0.00 0.00 3.55
2543 2675 1.202758 TGGGGCGCTCTTGTAATATGG 60.203 52.381 7.48 0.00 0.00 2.74
2544 2676 2.146342 CTGGGGCGCTCTTGTAATATG 58.854 52.381 7.48 0.00 0.00 1.78
2545 2677 2.047061 TCTGGGGCGCTCTTGTAATAT 58.953 47.619 7.48 0.00 0.00 1.28
2546 2678 1.491668 TCTGGGGCGCTCTTGTAATA 58.508 50.000 7.48 0.00 0.00 0.98
2547 2679 0.839946 ATCTGGGGCGCTCTTGTAAT 59.160 50.000 7.48 0.00 0.00 1.89
2548 2680 0.107703 CATCTGGGGCGCTCTTGTAA 60.108 55.000 7.48 0.00 0.00 2.41
2549 2681 0.975556 TCATCTGGGGCGCTCTTGTA 60.976 55.000 7.48 0.00 0.00 2.41
2550 2682 2.270205 CATCTGGGGCGCTCTTGT 59.730 61.111 7.48 0.00 0.00 3.16
2551 2683 1.817099 GTCATCTGGGGCGCTCTTG 60.817 63.158 7.48 0.00 0.00 3.02
2552 2684 2.293318 TGTCATCTGGGGCGCTCTT 61.293 57.895 7.48 0.00 0.00 2.85
2553 2685 2.685017 TGTCATCTGGGGCGCTCT 60.685 61.111 7.48 0.00 0.00 4.09
2554 2686 2.512515 GTGTCATCTGGGGCGCTC 60.513 66.667 7.64 1.18 0.00 5.03
2555 2687 4.457496 CGTGTCATCTGGGGCGCT 62.457 66.667 7.64 0.00 0.00 5.92
2556 2688 4.760047 ACGTGTCATCTGGGGCGC 62.760 66.667 0.00 0.00 0.00 6.53
2557 2689 2.815211 CACGTGTCATCTGGGGCG 60.815 66.667 7.58 0.00 0.00 6.13
2558 2690 3.127533 GCACGTGTCATCTGGGGC 61.128 66.667 18.38 0.00 0.00 5.80
2559 2691 2.436646 GGCACGTGTCATCTGGGG 60.437 66.667 16.80 0.00 0.00 4.96
2560 2692 2.034879 GTGGCACGTGTCATCTGGG 61.035 63.158 27.60 0.00 29.66 4.45
2561 2693 1.004560 AGTGGCACGTGTCATCTGG 60.005 57.895 27.60 0.00 29.66 3.86
2562 2694 0.319813 TGAGTGGCACGTGTCATCTG 60.320 55.000 27.60 0.00 29.66 2.90
2563 2695 0.392706 TTGAGTGGCACGTGTCATCT 59.607 50.000 27.60 23.20 29.66 2.90
2564 2696 0.512952 GTTGAGTGGCACGTGTCATC 59.487 55.000 27.60 22.43 29.66 2.92
2565 2697 0.884704 GGTTGAGTGGCACGTGTCAT 60.885 55.000 27.60 15.11 29.66 3.06
2566 2698 1.522806 GGTTGAGTGGCACGTGTCA 60.523 57.895 20.89 20.89 0.00 3.58
2567 2699 1.522806 TGGTTGAGTGGCACGTGTC 60.523 57.895 14.58 14.58 0.00 3.67
2568 2700 1.817941 GTGGTTGAGTGGCACGTGT 60.818 57.895 18.38 0.00 0.00 4.49
2569 2701 2.881266 CGTGGTTGAGTGGCACGTG 61.881 63.158 12.28 12.28 34.96 4.49
2570 2702 2.587753 CGTGGTTGAGTGGCACGT 60.588 61.111 12.71 0.11 34.96 4.49
2571 2703 4.012895 GCGTGGTTGAGTGGCACG 62.013 66.667 12.71 0.00 41.52 5.34
2572 2704 2.896801 CTGCGTGGTTGAGTGGCAC 61.897 63.158 10.29 10.29 0.00 5.01
2573 2705 2.591429 CTGCGTGGTTGAGTGGCA 60.591 61.111 0.00 0.00 0.00 4.92
2574 2706 3.357079 CCTGCGTGGTTGAGTGGC 61.357 66.667 0.00 0.00 0.00 5.01
2575 2707 2.669569 CCCTGCGTGGTTGAGTGG 60.670 66.667 0.00 0.00 0.00 4.00
2576 2708 1.669115 CTCCCTGCGTGGTTGAGTG 60.669 63.158 0.00 0.00 0.00 3.51
2577 2709 1.821061 CTCTCCCTGCGTGGTTGAGT 61.821 60.000 0.00 0.00 32.38 3.41
2578 2710 1.079543 CTCTCCCTGCGTGGTTGAG 60.080 63.158 0.00 0.00 0.00 3.02
2579 2711 2.583441 CCTCTCCCTGCGTGGTTGA 61.583 63.158 0.00 0.00 0.00 3.18
2580 2712 2.046892 CCTCTCCCTGCGTGGTTG 60.047 66.667 0.00 0.00 0.00 3.77
2581 2713 3.322466 CCCTCTCCCTGCGTGGTT 61.322 66.667 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.