Multiple sequence alignment - TraesCS7D01G022500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G022500 chr7D 100.000 6108 0 0 539 6646 10562466 10556359 0.000000e+00 11280.0
1 TraesCS7D01G022500 chr7D 94.648 3438 107 27 2635 6031 8843937 8847338 0.000000e+00 5258.0
2 TraesCS7D01G022500 chr7D 88.733 1287 91 29 1040 2310 8834655 8835903 0.000000e+00 1524.0
3 TraesCS7D01G022500 chr7D 94.650 243 9 4 2399 2639 8843670 8843910 2.260000e-99 374.0
4 TraesCS7D01G022500 chr7D 93.651 189 12 0 2122 2310 8836457 8836645 3.920000e-72 283.0
5 TraesCS7D01G022500 chr7D 97.857 140 3 0 6507 6646 608434139 608434278 6.660000e-60 243.0
6 TraesCS7D01G022500 chr7D 100.000 93 0 0 1 93 10563004 10562912 8.860000e-39 172.0
7 TraesCS7D01G022500 chr7D 86.885 61 8 0 634 694 535330992 535330932 1.200000e-07 69.4
8 TraesCS7D01G022500 chr7B 93.531 3447 121 25 2635 6031 111503769 111507163 0.000000e+00 5036.0
9 TraesCS7D01G022500 chr7B 89.679 872 44 11 1440 2310 111501929 111502755 0.000000e+00 1070.0
10 TraesCS7D01G022500 chr7B 87.903 744 49 13 725 1443 111500988 111501715 0.000000e+00 837.0
11 TraesCS7D01G022500 chr7B 95.219 251 9 3 2391 2639 111503493 111503742 1.740000e-105 394.0
12 TraesCS7D01G022500 chr7B 93.048 187 12 1 2122 2307 111503306 111503492 8.490000e-69 272.0
13 TraesCS7D01G022500 chr7A 95.545 2649 75 17 2635 5261 9692079 9689452 0.000000e+00 4198.0
14 TraesCS7D01G022500 chr7A 92.385 801 31 6 1515 2310 9693822 9693047 0.000000e+00 1114.0
15 TraesCS7D01G022500 chr7A 91.138 756 38 13 5304 6031 9689448 9688694 0.000000e+00 998.0
16 TraesCS7D01G022500 chr7A 90.725 593 33 7 878 1466 9694393 9693819 0.000000e+00 771.0
17 TraesCS7D01G022500 chr7A 93.625 251 11 4 2392 2639 9692354 9692106 2.930000e-98 370.0
18 TraesCS7D01G022500 chr7A 91.753 194 14 2 2118 2310 9692545 9692353 1.100000e-67 268.0
19 TraesCS7D01G022500 chr5D 94.850 2660 77 23 2635 5261 381153886 381156518 0.000000e+00 4098.0
20 TraesCS7D01G022500 chr5D 94.400 875 39 7 1441 2310 381152003 381152872 0.000000e+00 1336.0
21 TraesCS7D01G022500 chr5D 90.514 759 39 10 5304 6032 381156522 381157277 0.000000e+00 972.0
22 TraesCS7D01G022500 chr5D 94.800 250 11 2 2392 2639 381153610 381153859 8.080000e-104 388.0
23 TraesCS7D01G022500 chr5D 93.651 189 12 0 2122 2310 381153423 381153611 3.920000e-72 283.0
24 TraesCS7D01G022500 chr5D 92.432 185 12 2 1261 1443 381151735 381151919 5.110000e-66 263.0
25 TraesCS7D01G022500 chr5D 97.857 140 3 0 6507 6646 17467798 17467937 6.660000e-60 243.0
26 TraesCS7D01G022500 chr5D 92.481 133 8 2 723 855 381150864 381150994 8.800000e-44 189.0
27 TraesCS7D01G022500 chr4A 92.120 1472 71 14 3551 5002 729616318 729617764 0.000000e+00 2034.0
28 TraesCS7D01G022500 chr4A 91.860 774 38 8 5170 5927 729627091 729627855 0.000000e+00 1057.0
29 TraesCS7D01G022500 chr4A 90.290 587 39 4 5936 6506 728817509 728818093 0.000000e+00 752.0
30 TraesCS7D01G022500 chr4A 89.725 545 47 7 1025 1568 728937484 728938020 0.000000e+00 688.0
31 TraesCS7D01G022500 chr4A 89.758 537 45 8 1040 1574 730634168 730633640 0.000000e+00 678.0
32 TraesCS7D01G022500 chr4A 89.572 537 45 9 1040 1574 730581697 730581170 0.000000e+00 671.0
33 TraesCS7D01G022500 chr4A 89.385 537 46 8 1040 1574 730528378 730527851 0.000000e+00 665.0
34 TraesCS7D01G022500 chr4A 91.221 467 19 4 1439 1904 728237778 728238223 3.410000e-172 616.0
35 TraesCS7D01G022500 chr4A 87.337 537 47 10 1040 1574 730502473 730501956 4.440000e-166 595.0
36 TraesCS7D01G022500 chr4A 88.693 398 21 7 865 1261 728237104 728237478 1.310000e-126 464.0
37 TraesCS7D01G022500 chr4A 85.196 331 28 11 726 1041 730678202 730677878 2.990000e-83 320.0
38 TraesCS7D01G022500 chr4A 100.000 92 0 0 4997 5088 729619492 729619583 3.190000e-38 171.0
39 TraesCS7D01G022500 chr4A 98.000 50 1 0 5091 5140 729627042 729627091 3.300000e-13 87.9
40 TraesCS7D01G022500 chr6D 98.561 139 2 0 6508 6646 47042486 47042624 5.150000e-61 246.0
41 TraesCS7D01G022500 chr6D 98.561 139 2 0 6508 6646 47047560 47047698 5.150000e-61 246.0
42 TraesCS7D01G022500 chr6D 95.302 149 7 0 6498 6646 105058867 105059015 3.100000e-58 237.0
43 TraesCS7D01G022500 chr6D 95.098 102 4 1 2303 2403 68082855 68082956 6.900000e-35 159.0
44 TraesCS7D01G022500 chr4D 97.857 140 3 0 6507 6646 62771924 62772063 6.660000e-60 243.0
45 TraesCS7D01G022500 chr3D 97.857 140 3 0 6507 6646 374977261 374977122 6.660000e-60 243.0
46 TraesCS7D01G022500 chr2D 97.857 140 3 0 6507 6646 345860043 345860182 6.660000e-60 243.0
47 TraesCS7D01G022500 chr2D 97.857 140 3 0 6507 6646 381304238 381304099 6.660000e-60 243.0
48 TraesCS7D01G022500 chr1B 97.872 94 2 0 2303 2396 604705778 604705685 5.330000e-36 163.0
49 TraesCS7D01G022500 chr6B 96.907 97 2 1 2297 2393 38004043 38003948 1.920000e-35 161.0
50 TraesCS7D01G022500 chrUn 95.098 102 4 1 2296 2397 332204530 332204430 6.900000e-35 159.0
51 TraesCS7D01G022500 chrUn 95.098 102 4 1 2296 2397 332213712 332213812 6.900000e-35 159.0
52 TraesCS7D01G022500 chrUn 95.098 102 4 1 2296 2397 373754983 373754883 6.900000e-35 159.0
53 TraesCS7D01G022500 chr3A 91.964 112 4 5 2295 2405 197111233 197111126 1.150000e-32 152.0
54 TraesCS7D01G022500 chr3A 89.831 118 7 4 2281 2396 443203699 443203585 5.370000e-31 147.0
55 TraesCS7D01G022500 chr2A 88.800 125 10 4 2299 2420 500032950 500032827 4.150000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G022500 chr7D 10556359 10563004 6645 True 5726.000000 11280 100.0000 1 6646 2 chr7D.!!$R2 6645
1 TraesCS7D01G022500 chr7D 8843670 8847338 3668 False 2816.000000 5258 94.6490 2399 6031 2 chr7D.!!$F3 3632
2 TraesCS7D01G022500 chr7D 8834655 8836645 1990 False 903.500000 1524 91.1920 1040 2310 2 chr7D.!!$F2 1270
3 TraesCS7D01G022500 chr7B 111500988 111507163 6175 False 1521.800000 5036 91.8760 725 6031 5 chr7B.!!$F1 5306
4 TraesCS7D01G022500 chr7A 9688694 9694393 5699 True 1286.500000 4198 92.5285 878 6031 6 chr7A.!!$R1 5153
5 TraesCS7D01G022500 chr5D 381150864 381157277 6413 False 1075.571429 4098 93.3040 723 6032 7 chr5D.!!$F2 5309
6 TraesCS7D01G022500 chr4A 729616318 729619583 3265 False 1102.500000 2034 96.0600 3551 5088 2 chr4A.!!$F4 1537
7 TraesCS7D01G022500 chr4A 728817509 728818093 584 False 752.000000 752 90.2900 5936 6506 1 chr4A.!!$F1 570
8 TraesCS7D01G022500 chr4A 728937484 728938020 536 False 688.000000 688 89.7250 1025 1568 1 chr4A.!!$F2 543
9 TraesCS7D01G022500 chr4A 730633640 730634168 528 True 678.000000 678 89.7580 1040 1574 1 chr4A.!!$R4 534
10 TraesCS7D01G022500 chr4A 730581170 730581697 527 True 671.000000 671 89.5720 1040 1574 1 chr4A.!!$R3 534
11 TraesCS7D01G022500 chr4A 730527851 730528378 527 True 665.000000 665 89.3850 1040 1574 1 chr4A.!!$R2 534
12 TraesCS7D01G022500 chr4A 730501956 730502473 517 True 595.000000 595 87.3370 1040 1574 1 chr4A.!!$R1 534
13 TraesCS7D01G022500 chr4A 729627042 729627855 813 False 572.450000 1057 94.9300 5091 5927 2 chr4A.!!$F5 836
14 TraesCS7D01G022500 chr4A 728237104 728238223 1119 False 540.000000 616 89.9570 865 1904 2 chr4A.!!$F3 1039

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
659 660 0.028770 CTCACGATCAGCTCTCCGAC 59.971 60.000 5.33 0.00 0.00 4.79 F
686 687 0.036671 CTAACCGTCACCCAAGGGAC 60.037 60.000 13.15 0.00 38.96 4.46 F
1080 1440 0.107945 GATCTCTGGCGCCCCATATC 60.108 60.000 26.77 17.62 41.21 1.63 F
2022 2742 0.586319 CCAACGCACCACAACTACTG 59.414 55.000 0.00 0.00 0.00 2.74 F
3642 5164 0.320683 GTTTGCCAACCTGCCCATTC 60.321 55.000 0.00 0.00 0.00 2.67 F
3681 5203 0.385974 GGCACGCACAAACACTGATC 60.386 55.000 0.00 0.00 0.00 2.92 F
5215 8497 3.554960 GGCACCATCCTTTTTCCTGAAAC 60.555 47.826 0.00 0.00 0.00 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1654 2319 0.938168 GAAACAACAGCAGCAGCAGC 60.938 55.000 3.17 0.46 45.49 5.25 R
1918 2590 0.968405 GCAGGGTCAATTTTGGAGCA 59.032 50.000 0.00 0.00 34.56 4.26 R
2500 3970 2.208326 AAAGTTTGGCAACGAAGCAG 57.792 45.000 0.00 0.00 41.86 4.24 R
3741 5263 2.490351 GGGCATCCATTCATCATCCTGT 60.490 50.000 0.00 0.00 0.00 4.00 R
5270 8552 1.416401 ACCACACACAGAGTTACCCTG 59.584 52.381 0.00 0.00 37.64 4.45 R
5271 8553 1.802553 ACCACACACAGAGTTACCCT 58.197 50.000 0.00 0.00 0.00 4.34 R
6017 9356 0.555769 AGGACCTTGAAACCAGGCAA 59.444 50.000 0.00 0.00 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.402681 CCATGCCCCGTCACTCCT 61.403 66.667 0.00 0.00 0.00 3.69
18 19 2.124983 CATGCCCCGTCACTCCTG 60.125 66.667 0.00 0.00 0.00 3.86
19 20 4.101448 ATGCCCCGTCACTCCTGC 62.101 66.667 0.00 0.00 0.00 4.85
22 23 3.636231 CCCCGTCACTCCTGCCAA 61.636 66.667 0.00 0.00 0.00 4.52
23 24 2.046892 CCCGTCACTCCTGCCAAG 60.047 66.667 0.00 0.00 0.00 3.61
24 25 2.583441 CCCGTCACTCCTGCCAAGA 61.583 63.158 0.00 0.00 0.00 3.02
25 26 1.079543 CCGTCACTCCTGCCAAGAG 60.080 63.158 0.00 0.00 37.39 2.85
26 27 1.536073 CCGTCACTCCTGCCAAGAGA 61.536 60.000 0.00 0.00 35.27 3.10
27 28 0.318441 CGTCACTCCTGCCAAGAGAA 59.682 55.000 0.00 0.00 35.27 2.87
28 29 1.802069 GTCACTCCTGCCAAGAGAAC 58.198 55.000 0.00 0.00 35.27 3.01
29 30 0.687354 TCACTCCTGCCAAGAGAACC 59.313 55.000 0.00 0.00 35.27 3.62
30 31 0.397941 CACTCCTGCCAAGAGAACCA 59.602 55.000 0.00 0.00 35.27 3.67
31 32 1.140312 ACTCCTGCCAAGAGAACCAA 58.860 50.000 0.00 0.00 35.27 3.67
32 33 1.494721 ACTCCTGCCAAGAGAACCAAA 59.505 47.619 0.00 0.00 35.27 3.28
33 34 1.882623 CTCCTGCCAAGAGAACCAAAC 59.117 52.381 0.00 0.00 32.86 2.93
34 35 1.494721 TCCTGCCAAGAGAACCAAACT 59.505 47.619 0.00 0.00 0.00 2.66
35 36 2.708861 TCCTGCCAAGAGAACCAAACTA 59.291 45.455 0.00 0.00 0.00 2.24
36 37 3.077359 CCTGCCAAGAGAACCAAACTAG 58.923 50.000 0.00 0.00 0.00 2.57
37 38 3.077359 CTGCCAAGAGAACCAAACTAGG 58.923 50.000 0.00 0.00 0.00 3.02
38 39 2.224769 TGCCAAGAGAACCAAACTAGGG 60.225 50.000 0.00 0.00 0.00 3.53
39 40 2.224793 GCCAAGAGAACCAAACTAGGGT 60.225 50.000 0.00 0.00 41.41 4.34
49 50 4.466827 ACCAAACTAGGGTTTACAAGTGG 58.533 43.478 0.00 0.00 42.96 4.00
50 51 4.079615 ACCAAACTAGGGTTTACAAGTGGT 60.080 41.667 0.00 0.00 42.96 4.16
51 52 4.277423 CCAAACTAGGGTTTACAAGTGGTG 59.723 45.833 0.00 0.00 42.96 4.17
52 53 4.783560 AACTAGGGTTTACAAGTGGTGT 57.216 40.909 0.00 0.00 44.82 4.16
53 54 5.892524 AACTAGGGTTTACAAGTGGTGTA 57.107 39.130 0.00 0.00 41.98 2.90
54 55 5.219343 ACTAGGGTTTACAAGTGGTGTAC 57.781 43.478 0.00 0.00 42.56 2.90
55 56 3.116079 AGGGTTTACAAGTGGTGTACG 57.884 47.619 0.00 0.00 42.56 3.67
56 57 2.699846 AGGGTTTACAAGTGGTGTACGA 59.300 45.455 0.00 0.00 42.56 3.43
57 58 2.802247 GGGTTTACAAGTGGTGTACGAC 59.198 50.000 0.00 0.00 42.56 4.34
58 59 2.802247 GGTTTACAAGTGGTGTACGACC 59.198 50.000 7.34 7.34 42.56 4.79
69 70 4.728102 TACGACCGTGCGCCCAAG 62.728 66.667 4.18 0.00 33.86 3.61
72 73 3.723348 GACCGTGCGCCCAAGAAC 61.723 66.667 4.18 0.00 0.00 3.01
73 74 4.555709 ACCGTGCGCCCAAGAACA 62.556 61.111 4.18 0.00 0.00 3.18
74 75 3.055719 CCGTGCGCCCAAGAACAT 61.056 61.111 4.18 0.00 0.00 2.71
75 76 2.480555 CGTGCGCCCAAGAACATC 59.519 61.111 4.18 0.00 0.00 3.06
76 77 2.324330 CGTGCGCCCAAGAACATCA 61.324 57.895 4.18 0.00 0.00 3.07
77 78 1.210155 GTGCGCCCAAGAACATCAC 59.790 57.895 4.18 0.00 0.00 3.06
78 79 1.228094 TGCGCCCAAGAACATCACA 60.228 52.632 4.18 0.00 0.00 3.58
79 80 0.821301 TGCGCCCAAGAACATCACAA 60.821 50.000 4.18 0.00 0.00 3.33
80 81 0.313672 GCGCCCAAGAACATCACAAA 59.686 50.000 0.00 0.00 0.00 2.83
81 82 1.269517 GCGCCCAAGAACATCACAAAA 60.270 47.619 0.00 0.00 0.00 2.44
82 83 2.664916 CGCCCAAGAACATCACAAAAG 58.335 47.619 0.00 0.00 0.00 2.27
83 84 2.607771 CGCCCAAGAACATCACAAAAGG 60.608 50.000 0.00 0.00 0.00 3.11
84 85 2.365293 GCCCAAGAACATCACAAAAGGT 59.635 45.455 0.00 0.00 0.00 3.50
556 557 3.706055 GGTCAGAGGTGCACAGAAA 57.294 52.632 20.43 0.00 0.00 2.52
557 558 1.230324 GGTCAGAGGTGCACAGAAAC 58.770 55.000 20.43 9.40 0.00 2.78
558 559 1.475034 GGTCAGAGGTGCACAGAAACA 60.475 52.381 20.43 0.00 0.00 2.83
559 560 1.869767 GTCAGAGGTGCACAGAAACAG 59.130 52.381 20.43 1.39 0.00 3.16
560 561 1.202687 TCAGAGGTGCACAGAAACAGG 60.203 52.381 20.43 0.00 0.00 4.00
561 562 0.839946 AGAGGTGCACAGAAACAGGT 59.160 50.000 20.43 0.00 0.00 4.00
562 563 0.947244 GAGGTGCACAGAAACAGGTG 59.053 55.000 20.43 0.00 38.05 4.00
573 574 6.676950 CACAGAAACAGGTGCATATAAAACA 58.323 36.000 0.00 0.00 0.00 2.83
574 575 6.803320 CACAGAAACAGGTGCATATAAAACAG 59.197 38.462 0.00 0.00 0.00 3.16
575 576 6.071952 ACAGAAACAGGTGCATATAAAACAGG 60.072 38.462 0.00 0.00 0.00 4.00
576 577 4.718940 AACAGGTGCATATAAAACAGGC 57.281 40.909 0.00 0.00 0.00 4.85
577 578 3.023832 ACAGGTGCATATAAAACAGGCC 58.976 45.455 0.00 0.00 0.00 5.19
578 579 3.023119 CAGGTGCATATAAAACAGGCCA 58.977 45.455 5.01 0.00 0.00 5.36
579 580 3.446873 CAGGTGCATATAAAACAGGCCAA 59.553 43.478 5.01 0.00 0.00 4.52
580 581 3.701040 AGGTGCATATAAAACAGGCCAAG 59.299 43.478 5.01 0.00 0.00 3.61
581 582 3.181476 GGTGCATATAAAACAGGCCAAGG 60.181 47.826 5.01 0.00 0.00 3.61
582 583 2.430332 TGCATATAAAACAGGCCAAGGC 59.570 45.455 5.01 1.52 41.06 4.35
583 584 2.543653 GCATATAAAACAGGCCAAGGCG 60.544 50.000 5.01 0.00 43.06 5.52
584 585 1.099689 TATAAAACAGGCCAAGGCGC 58.900 50.000 5.01 0.00 43.06 6.53
600 601 4.194720 GCCGACGGCGAGATCACT 62.195 66.667 25.24 0.00 39.62 3.41
601 602 2.490217 CCGACGGCGAGATCACTT 59.510 61.111 15.16 0.00 40.82 3.16
602 603 1.874019 CCGACGGCGAGATCACTTG 60.874 63.158 15.16 0.00 40.82 3.16
603 604 1.874019 CGACGGCGAGATCACTTGG 60.874 63.158 16.62 0.00 40.82 3.61
604 605 2.125512 ACGGCGAGATCACTTGGC 60.126 61.111 16.62 0.00 45.86 4.52
606 607 2.892425 GGCGAGATCACTTGGCGG 60.892 66.667 0.00 0.00 41.91 6.13
607 608 3.567797 GCGAGATCACTTGGCGGC 61.568 66.667 0.00 0.00 0.00 6.53
608 609 3.257561 CGAGATCACTTGGCGGCG 61.258 66.667 0.51 0.51 0.00 6.46
609 610 2.892425 GAGATCACTTGGCGGCGG 60.892 66.667 9.78 1.94 0.00 6.13
610 611 4.473520 AGATCACTTGGCGGCGGG 62.474 66.667 9.78 1.53 0.00 6.13
629 630 4.329545 GGTGGAGCGTGGGCAAGA 62.330 66.667 0.00 0.00 43.41 3.02
630 631 2.045926 GTGGAGCGTGGGCAAGAT 60.046 61.111 0.00 0.00 43.41 2.40
631 632 2.109126 GTGGAGCGTGGGCAAGATC 61.109 63.158 0.00 0.00 43.41 2.75
632 633 2.293318 TGGAGCGTGGGCAAGATCT 61.293 57.895 0.00 0.00 43.41 2.75
633 634 1.817099 GGAGCGTGGGCAAGATCTG 60.817 63.158 0.00 0.00 43.41 2.90
634 635 1.219124 GAGCGTGGGCAAGATCTGA 59.781 57.895 0.00 0.00 43.41 3.27
635 636 0.179062 GAGCGTGGGCAAGATCTGAT 60.179 55.000 0.00 0.00 43.41 2.90
636 637 0.179062 AGCGTGGGCAAGATCTGATC 60.179 55.000 9.65 9.65 43.41 2.92
637 638 1.493950 GCGTGGGCAAGATCTGATCG 61.494 60.000 11.73 0.51 39.62 3.69
638 639 1.493950 CGTGGGCAAGATCTGATCGC 61.494 60.000 11.73 9.96 0.00 4.58
639 640 1.146930 TGGGCAAGATCTGATCGCC 59.853 57.895 21.44 21.44 42.21 5.54
640 641 4.055654 GGCAAGATCTGATCGCCC 57.944 61.111 19.83 13.94 36.73 6.13
641 642 1.449353 GGCAAGATCTGATCGCCCT 59.551 57.895 19.83 0.00 36.73 5.19
642 643 0.602372 GGCAAGATCTGATCGCCCTC 60.602 60.000 19.83 7.32 36.73 4.30
643 644 0.105593 GCAAGATCTGATCGCCCTCA 59.894 55.000 11.73 0.00 0.00 3.86
644 645 1.863267 CAAGATCTGATCGCCCTCAC 58.137 55.000 11.73 0.00 0.00 3.51
645 646 0.387202 AAGATCTGATCGCCCTCACG 59.613 55.000 11.73 0.00 0.00 4.35
652 653 2.755876 TCGCCCTCACGATCAGCT 60.756 61.111 0.00 0.00 37.09 4.24
653 654 2.279120 CGCCCTCACGATCAGCTC 60.279 66.667 0.00 0.00 34.06 4.09
654 655 2.780094 CGCCCTCACGATCAGCTCT 61.780 63.158 0.00 0.00 34.06 4.09
655 656 1.067250 GCCCTCACGATCAGCTCTC 59.933 63.158 0.00 0.00 0.00 3.20
656 657 1.739049 CCCTCACGATCAGCTCTCC 59.261 63.158 0.00 0.00 0.00 3.71
657 658 1.358402 CCTCACGATCAGCTCTCCG 59.642 63.158 0.00 0.00 0.00 4.63
658 659 1.098129 CCTCACGATCAGCTCTCCGA 61.098 60.000 5.33 0.00 0.00 4.55
659 660 0.028770 CTCACGATCAGCTCTCCGAC 59.971 60.000 5.33 0.00 0.00 4.79
660 661 0.676782 TCACGATCAGCTCTCCGACA 60.677 55.000 5.33 0.00 0.00 4.35
661 662 0.171231 CACGATCAGCTCTCCGACAA 59.829 55.000 5.33 0.00 0.00 3.18
662 663 1.107114 ACGATCAGCTCTCCGACAAT 58.893 50.000 5.33 0.00 0.00 2.71
663 664 1.478510 ACGATCAGCTCTCCGACAATT 59.521 47.619 5.33 0.00 0.00 2.32
664 665 2.688446 ACGATCAGCTCTCCGACAATTA 59.312 45.455 5.33 0.00 0.00 1.40
665 666 3.046390 CGATCAGCTCTCCGACAATTAC 58.954 50.000 0.00 0.00 0.00 1.89
666 667 2.561733 TCAGCTCTCCGACAATTACG 57.438 50.000 0.00 0.00 0.00 3.18
667 668 0.924090 CAGCTCTCCGACAATTACGC 59.076 55.000 0.00 0.00 0.00 4.42
668 669 0.818296 AGCTCTCCGACAATTACGCT 59.182 50.000 0.00 0.00 0.00 5.07
669 670 2.022195 AGCTCTCCGACAATTACGCTA 58.978 47.619 0.00 0.00 0.00 4.26
670 671 2.426024 AGCTCTCCGACAATTACGCTAA 59.574 45.455 0.00 0.00 0.00 3.09
671 672 2.534757 GCTCTCCGACAATTACGCTAAC 59.465 50.000 0.00 0.00 0.00 2.34
672 673 3.114065 CTCTCCGACAATTACGCTAACC 58.886 50.000 0.00 0.00 0.00 2.85
673 674 1.850441 CTCCGACAATTACGCTAACCG 59.150 52.381 0.00 0.00 44.21 4.44
682 683 3.870606 CGCTAACCGTCACCCAAG 58.129 61.111 0.00 0.00 0.00 3.61
683 684 1.740296 CGCTAACCGTCACCCAAGG 60.740 63.158 0.00 0.00 0.00 3.61
684 685 1.376812 GCTAACCGTCACCCAAGGG 60.377 63.158 2.91 2.91 42.03 3.95
685 686 1.833787 GCTAACCGTCACCCAAGGGA 61.834 60.000 13.15 0.00 38.96 4.20
686 687 0.036671 CTAACCGTCACCCAAGGGAC 60.037 60.000 13.15 0.00 38.96 4.46
690 691 2.346365 GTCACCCAAGGGACGGAC 59.654 66.667 13.15 12.07 38.96 4.79
691 692 2.203182 TCACCCAAGGGACGGACT 59.797 61.111 13.15 0.00 38.96 3.85
692 693 1.460689 TCACCCAAGGGACGGACTT 60.461 57.895 13.15 0.00 38.96 3.01
693 694 1.302511 CACCCAAGGGACGGACTTG 60.303 63.158 13.15 8.48 43.73 3.16
694 695 2.359975 CCCAAGGGACGGACTTGC 60.360 66.667 0.00 0.00 42.98 4.01
695 696 2.359975 CCAAGGGACGGACTTGCC 60.360 66.667 9.60 0.00 42.98 4.52
696 697 2.359975 CAAGGGACGGACTTGCCC 60.360 66.667 0.00 0.00 38.89 5.36
697 698 2.852075 AAGGGACGGACTTGCCCA 60.852 61.111 0.00 0.00 44.55 5.36
698 699 2.457323 AAGGGACGGACTTGCCCAA 61.457 57.895 0.00 0.00 44.55 4.12
699 700 2.671963 GGGACGGACTTGCCCAAC 60.672 66.667 0.00 0.00 41.64 3.77
700 701 2.671963 GGACGGACTTGCCCAACC 60.672 66.667 0.00 0.00 0.00 3.77
701 702 2.671963 GACGGACTTGCCCAACCC 60.672 66.667 0.00 0.00 0.00 4.11
702 703 4.280019 ACGGACTTGCCCAACCCC 62.280 66.667 0.00 0.00 0.00 4.95
703 704 4.278513 CGGACTTGCCCAACCCCA 62.279 66.667 0.00 0.00 0.00 4.96
704 705 2.283173 GGACTTGCCCAACCCCAG 60.283 66.667 0.00 0.00 0.00 4.45
705 706 2.991540 GACTTGCCCAACCCCAGC 60.992 66.667 0.00 0.00 0.00 4.85
706 707 3.511610 ACTTGCCCAACCCCAGCT 61.512 61.111 0.00 0.00 0.00 4.24
707 708 2.993264 CTTGCCCAACCCCAGCTG 60.993 66.667 6.78 6.78 0.00 4.24
708 709 4.619320 TTGCCCAACCCCAGCTGG 62.619 66.667 26.87 26.87 0.00 4.85
710 711 3.657350 GCCCAACCCCAGCTGGTA 61.657 66.667 30.63 0.00 37.76 3.25
711 712 3.176297 CCCAACCCCAGCTGGTAA 58.824 61.111 30.63 0.00 37.76 2.85
712 713 1.462928 CCCAACCCCAGCTGGTAAA 59.537 57.895 30.63 0.00 37.76 2.01
713 714 0.178947 CCCAACCCCAGCTGGTAAAA 60.179 55.000 30.63 0.00 37.76 1.52
714 715 1.552254 CCCAACCCCAGCTGGTAAAAT 60.552 52.381 30.63 9.78 37.76 1.82
715 716 2.256306 CCAACCCCAGCTGGTAAAATT 58.744 47.619 30.63 14.12 37.76 1.82
716 717 2.233676 CCAACCCCAGCTGGTAAAATTC 59.766 50.000 30.63 0.00 37.76 2.17
717 718 3.165071 CAACCCCAGCTGGTAAAATTCT 58.835 45.455 30.63 3.91 37.76 2.40
718 719 3.542969 ACCCCAGCTGGTAAAATTCTT 57.457 42.857 30.63 1.52 36.67 2.52
719 720 3.856900 ACCCCAGCTGGTAAAATTCTTT 58.143 40.909 30.63 0.00 36.67 2.52
720 721 3.578282 ACCCCAGCTGGTAAAATTCTTTG 59.422 43.478 30.63 10.85 36.67 2.77
721 722 3.831911 CCCCAGCTGGTAAAATTCTTTGA 59.168 43.478 30.63 0.00 0.00 2.69
785 786 2.123854 ATGGGCTCTAGCGGACGA 60.124 61.111 0.00 0.00 43.26 4.20
836 837 3.032017 CACATCGTGGTTCTCTTCTGT 57.968 47.619 0.00 0.00 0.00 3.41
997 1357 3.071206 GGAGTGGGCGAGAGAGCA 61.071 66.667 0.00 0.00 39.27 4.26
1073 1433 0.394565 ATGTAAGGATCTCTGGCGCC 59.605 55.000 22.73 22.73 0.00 6.53
1074 1434 1.069935 GTAAGGATCTCTGGCGCCC 59.930 63.158 26.77 6.80 0.00 6.13
1077 1437 3.564218 GGATCTCTGGCGCCCCAT 61.564 66.667 26.77 10.29 41.21 4.00
1078 1438 2.217038 GGATCTCTGGCGCCCCATA 61.217 63.158 26.77 7.64 41.21 2.74
1079 1439 1.557269 GGATCTCTGGCGCCCCATAT 61.557 60.000 26.77 12.76 41.21 1.78
1080 1440 0.107945 GATCTCTGGCGCCCCATATC 60.108 60.000 26.77 17.62 41.21 1.63
1081 1441 1.892819 ATCTCTGGCGCCCCATATCG 61.893 60.000 26.77 5.28 41.21 2.92
1082 1442 2.842462 TCTGGCGCCCCATATCGT 60.842 61.111 26.77 0.00 41.21 3.73
1083 1443 2.111043 CTGGCGCCCCATATCGTT 59.889 61.111 26.77 0.00 41.21 3.85
1228 1621 4.994217 TGTTAACGAGAAATGCTCACATGA 59.006 37.500 0.00 0.00 44.15 3.07
1231 1624 5.633830 AACGAGAAATGCTCACATGATTT 57.366 34.783 0.00 0.00 44.15 2.17
1232 1625 6.741992 AACGAGAAATGCTCACATGATTTA 57.258 33.333 0.00 0.00 44.15 1.40
1233 1626 6.355397 ACGAGAAATGCTCACATGATTTAG 57.645 37.500 0.00 0.00 44.15 1.85
1234 1627 5.877012 ACGAGAAATGCTCACATGATTTAGT 59.123 36.000 0.00 0.00 44.15 2.24
1365 1801 6.047870 TGTTCTGCACGGTTTACTACTTTTA 58.952 36.000 0.00 0.00 0.00 1.52
1399 1835 6.312399 TGGTGATATCCAAAATAATCGTGC 57.688 37.500 0.00 0.00 34.24 5.34
1407 1843 0.655733 AAATAATCGTGCCCGCGAAG 59.344 50.000 8.23 0.00 44.38 3.79
1460 2125 5.831702 TGTACAAGTTAGAGTAGCCTAGC 57.168 43.478 0.00 0.00 0.00 3.42
1557 2222 1.140816 GTTGCTTCACGACTCTGGAC 58.859 55.000 0.00 0.00 0.00 4.02
1652 2317 7.155328 AGTTCATGAAGGATTACGGTATGATC 58.845 38.462 8.80 0.00 0.00 2.92
1653 2318 6.918067 TCATGAAGGATTACGGTATGATCT 57.082 37.500 0.00 0.00 0.00 2.75
1654 2319 6.691508 TCATGAAGGATTACGGTATGATCTG 58.308 40.000 0.00 0.00 0.00 2.90
1667 2332 1.745864 GATCTGCTGCTGCTGCTGT 60.746 57.895 27.67 18.40 39.81 4.40
1705 2374 4.038402 GCATGCTGTTATTATCTTTGCCCT 59.962 41.667 11.37 0.00 0.00 5.19
1854 2526 7.491048 TCAAAGAACAGGCAAAATTTGTAACTC 59.509 33.333 7.60 0.00 0.00 3.01
1855 2527 5.519722 AGAACAGGCAAAATTTGTAACTCG 58.480 37.500 7.60 2.74 0.00 4.18
1856 2528 3.638484 ACAGGCAAAATTTGTAACTCGC 58.362 40.909 7.60 0.00 0.00 5.03
1900 2572 4.491924 CGTTTCTGATGTAACCACGCATAC 60.492 45.833 0.00 0.00 0.00 2.39
1901 2573 3.878160 TCTGATGTAACCACGCATACA 57.122 42.857 0.00 0.00 36.54 2.29
1902 2574 4.195225 TCTGATGTAACCACGCATACAA 57.805 40.909 0.00 0.00 35.79 2.41
1903 2575 4.570930 TCTGATGTAACCACGCATACAAA 58.429 39.130 0.00 0.00 35.79 2.83
1904 2576 4.390603 TCTGATGTAACCACGCATACAAAC 59.609 41.667 0.00 0.00 35.79 2.93
1905 2577 4.065789 TGATGTAACCACGCATACAAACA 58.934 39.130 0.00 0.00 35.79 2.83
1906 2578 4.697828 TGATGTAACCACGCATACAAACAT 59.302 37.500 0.00 0.00 35.79 2.71
1907 2579 5.875359 TGATGTAACCACGCATACAAACATA 59.125 36.000 0.00 0.00 35.79 2.29
1908 2580 5.533533 TGTAACCACGCATACAAACATAC 57.466 39.130 0.00 0.00 0.00 2.39
1909 2581 5.239351 TGTAACCACGCATACAAACATACT 58.761 37.500 0.00 0.00 0.00 2.12
1910 2582 4.939509 AACCACGCATACAAACATACTC 57.060 40.909 0.00 0.00 0.00 2.59
1911 2583 3.932822 ACCACGCATACAAACATACTCA 58.067 40.909 0.00 0.00 0.00 3.41
1912 2584 3.932710 ACCACGCATACAAACATACTCAG 59.067 43.478 0.00 0.00 0.00 3.35
1913 2585 3.242413 CCACGCATACAAACATACTCAGC 60.242 47.826 0.00 0.00 0.00 4.26
1914 2586 3.370672 CACGCATACAAACATACTCAGCA 59.629 43.478 0.00 0.00 0.00 4.41
1915 2587 4.034394 CACGCATACAAACATACTCAGCAT 59.966 41.667 0.00 0.00 0.00 3.79
1916 2588 4.034394 ACGCATACAAACATACTCAGCATG 59.966 41.667 0.00 0.00 37.54 4.06
1980 2700 9.314321 TGTTATTACTAATTAGCTCAAGTGCTC 57.686 33.333 12.54 0.00 42.97 4.26
2022 2742 0.586319 CCAACGCACCACAACTACTG 59.414 55.000 0.00 0.00 0.00 2.74
2321 3789 9.986157 ATATATAACATTCTACTCCCTCCGTAA 57.014 33.333 0.00 0.00 0.00 3.18
2322 3790 8.716674 ATATAACATTCTACTCCCTCCGTAAA 57.283 34.615 0.00 0.00 0.00 2.01
2323 3791 4.732672 ACATTCTACTCCCTCCGTAAAC 57.267 45.455 0.00 0.00 0.00 2.01
2324 3792 4.351127 ACATTCTACTCCCTCCGTAAACT 58.649 43.478 0.00 0.00 0.00 2.66
2325 3793 5.513233 ACATTCTACTCCCTCCGTAAACTA 58.487 41.667 0.00 0.00 0.00 2.24
2326 3794 5.954150 ACATTCTACTCCCTCCGTAAACTAA 59.046 40.000 0.00 0.00 0.00 2.24
2327 3795 6.610425 ACATTCTACTCCCTCCGTAAACTAAT 59.390 38.462 0.00 0.00 0.00 1.73
2328 3796 7.781693 ACATTCTACTCCCTCCGTAAACTAATA 59.218 37.037 0.00 0.00 0.00 0.98
2329 3797 8.804204 CATTCTACTCCCTCCGTAAACTAATAT 58.196 37.037 0.00 0.00 0.00 1.28
2331 3799 9.866655 TTCTACTCCCTCCGTAAACTAATATAA 57.133 33.333 0.00 0.00 0.00 0.98
2332 3800 9.512588 TCTACTCCCTCCGTAAACTAATATAAG 57.487 37.037 0.00 0.00 0.00 1.73
2333 3801 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
2334 3802 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2335 3803 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2336 3804 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2337 3805 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2338 3806 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2339 3807 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2340 3808 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2341 3809 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2342 3810 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2387 3855 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2388 3856 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
2389 3857 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
2447 3915 8.163408 CCTGGTCTCCAATATATTGATAACCAA 58.837 37.037 27.41 18.86 39.40 3.67
2500 3970 9.941664 CCAAATGTCAACAAATAGATAGATCAC 57.058 33.333 0.00 0.00 0.00 3.06
2507 3977 7.436376 TCAACAAATAGATAGATCACTGCTTCG 59.564 37.037 0.00 0.00 0.00 3.79
2559 4031 9.865321 CAATCTCACAAAATAGTGGAATGAAAT 57.135 29.630 0.00 0.00 39.93 2.17
2571 4043 6.605119 AGTGGAATGAAATAATAGACCCCTG 58.395 40.000 0.00 0.00 0.00 4.45
2578 4050 3.926058 ATAATAGACCCCTGCGTTGTT 57.074 42.857 0.00 0.00 0.00 2.83
2639 4112 8.638685 TCTTTTAACCTTAGCGTACATGATAC 57.361 34.615 0.00 0.00 0.00 2.24
2640 4113 8.252417 TCTTTTAACCTTAGCGTACATGATACA 58.748 33.333 0.00 0.00 0.00 2.29
2641 4114 8.951787 TTTTAACCTTAGCGTACATGATACAT 57.048 30.769 0.00 0.00 0.00 2.29
2642 4115 7.940178 TTAACCTTAGCGTACATGATACATG 57.060 36.000 0.00 9.72 0.00 3.21
2645 4118 5.302059 ACCTTAGCGTACATGATACATGTCT 59.698 40.000 18.45 12.96 33.76 3.41
2794 4297 6.569801 GCCTGTGGTTTTAGGAAACTCATAAC 60.570 42.308 0.00 0.00 43.68 1.89
2823 4326 5.702349 AATGCCTCACTTTTCTTCTTCTG 57.298 39.130 0.00 0.00 0.00 3.02
3039 4542 4.999311 TCATGTATGCTGATGCTAATGTCC 59.001 41.667 0.00 0.00 40.48 4.02
3242 4745 6.683974 ACCAGTATTGATCATTGCTTGTAC 57.316 37.500 9.62 0.00 0.00 2.90
3527 5033 4.170468 AGTGTCCTTCCAATTGTGACTT 57.830 40.909 4.43 0.00 0.00 3.01
3535 5041 5.163519 CCTTCCAATTGTGACTTTTGTGACT 60.164 40.000 4.43 0.00 37.44 3.41
3642 5164 0.320683 GTTTGCCAACCTGCCCATTC 60.321 55.000 0.00 0.00 0.00 2.67
3650 5172 3.571401 CCAACCTGCCCATTCTTCATATC 59.429 47.826 0.00 0.00 0.00 1.63
3681 5203 0.385974 GGCACGCACAAACACTGATC 60.386 55.000 0.00 0.00 0.00 2.92
4289 5827 9.950680 AATTGTATATTTGCTTAAACAGGATCG 57.049 29.630 0.00 0.00 0.00 3.69
5215 8497 3.554960 GGCACCATCCTTTTTCCTGAAAC 60.555 47.826 0.00 0.00 0.00 2.78
5256 8538 6.377327 AGATATTTGGCACCTAAATGTTCG 57.623 37.500 0.00 0.00 0.00 3.95
5266 8548 5.679906 CACCTAAATGTTCGAGTTCACTTG 58.320 41.667 0.00 0.00 0.00 3.16
5267 8549 5.465390 CACCTAAATGTTCGAGTTCACTTGA 59.535 40.000 0.00 0.00 34.69 3.02
5268 8550 5.465724 ACCTAAATGTTCGAGTTCACTTGAC 59.534 40.000 0.00 0.00 36.18 3.18
5269 8551 5.696724 CCTAAATGTTCGAGTTCACTTGACT 59.303 40.000 0.00 0.00 36.18 3.41
5270 8552 5.659048 AAATGTTCGAGTTCACTTGACTC 57.341 39.130 0.00 0.00 36.18 3.36
5271 8553 3.793797 TGTTCGAGTTCACTTGACTCA 57.206 42.857 0.00 0.00 36.18 3.41
5272 8554 3.706698 TGTTCGAGTTCACTTGACTCAG 58.293 45.455 0.00 0.00 36.18 3.35
5280 8577 4.039366 AGTTCACTTGACTCAGGGTAACTC 59.961 45.833 5.20 0.00 0.00 3.01
5401 8698 0.528924 GCAAATGTCATGGCTCTGCA 59.471 50.000 12.11 0.00 0.00 4.41
5589 8887 1.340502 GGAAGGGAGCTTCTTCAAGGG 60.341 57.143 23.27 0.00 41.59 3.95
5673 8971 6.150474 TGGTTATCTTAGTGGCTACAAAAAGC 59.850 38.462 2.02 0.00 41.99 3.51
5736 9040 2.781681 ACAAAGCCATTAGTAGCGGT 57.218 45.000 0.00 0.00 0.00 5.68
5740 9044 2.884894 AGCCATTAGTAGCGGTGTAC 57.115 50.000 0.00 0.00 0.00 2.90
5780 9084 4.265073 GACCCTTGATGTGCTTTGACTAT 58.735 43.478 0.00 0.00 0.00 2.12
5969 9308 8.560374 TGACTTCTGTATCTATATCAGTGTTCG 58.440 37.037 0.00 0.00 0.00 3.95
5971 9310 7.502895 ACTTCTGTATCTATATCAGTGTTCGGT 59.497 37.037 0.00 0.00 0.00 4.69
5972 9311 7.203255 TCTGTATCTATATCAGTGTTCGGTG 57.797 40.000 0.00 0.00 0.00 4.94
5973 9312 6.996282 TCTGTATCTATATCAGTGTTCGGTGA 59.004 38.462 0.00 0.00 0.00 4.02
5993 9332 1.186200 TGGAGAGGTTCGGTGATGAG 58.814 55.000 0.00 0.00 0.00 2.90
6017 9356 7.118723 AGCTTCTGTATCTATATCAGCTAGCT 58.881 38.462 12.68 12.68 39.52 3.32
6090 9429 2.103263 AGACTGCTTTTCAAGGTCTCGT 59.897 45.455 0.00 0.00 32.66 4.18
6196 9535 2.679349 GCATCAACTCTCCCTCAACTCC 60.679 54.545 0.00 0.00 0.00 3.85
6203 9542 2.182030 CCCTCAACTCCGTCGCTC 59.818 66.667 0.00 0.00 0.00 5.03
6209 9548 3.898627 AACTCCGTCGCTCGTGCTG 62.899 63.158 7.97 1.69 37.94 4.41
6227 9566 3.317711 TGCTGCCGGATGGTAATTTTATG 59.682 43.478 5.05 0.00 37.67 1.90
6241 9580 6.764560 GGTAATTTTATGCTTCCTACTTCCGA 59.235 38.462 0.00 0.00 0.00 4.55
6244 9583 2.969628 ATGCTTCCTACTTCCGACTG 57.030 50.000 0.00 0.00 0.00 3.51
6252 9591 4.197750 TCCTACTTCCGACTGATGTACTC 58.802 47.826 0.00 0.00 33.70 2.59
6260 9599 3.242903 CCGACTGATGTACTCTAGTGCAG 60.243 52.174 7.01 5.23 43.50 4.41
6285 9638 6.317893 GTCCCACTCTTTTTAGTTTTGACTCA 59.682 38.462 0.00 0.00 0.00 3.41
6293 9646 6.783708 TTTTAGTTTTGACTCATGTTGGGT 57.216 33.333 0.00 0.00 30.71 4.51
6310 9663 5.947566 TGTTGGGTAAAGTTCTAATTAGGGC 59.052 40.000 12.54 5.97 0.00 5.19
6311 9664 4.773013 TGGGTAAAGTTCTAATTAGGGCG 58.227 43.478 12.54 0.00 0.00 6.13
6316 9669 6.256539 GGTAAAGTTCTAATTAGGGCGTACAC 59.743 42.308 12.54 3.71 0.00 2.90
6336 9689 7.378461 CGTACACTTTGCACTAAATGAAAATGT 59.622 33.333 0.00 0.00 35.13 2.71
6337 9690 7.698836 ACACTTTGCACTAAATGAAAATGTC 57.301 32.000 0.00 0.00 35.13 3.06
6342 9695 9.424659 CTTTGCACTAAATGAAAATGTCAAAAC 57.575 29.630 0.00 0.00 40.50 2.43
6352 9705 6.279882 TGAAAATGTCAAAACTCCATGGTTC 58.720 36.000 12.58 3.86 31.51 3.62
6376 9729 2.995283 AGTATTTTGGTACTTCCCGCC 58.005 47.619 0.00 0.00 30.95 6.13
6390 9745 4.587262 ACTTCCCGCCAAAAAGAAGTATTT 59.413 37.500 2.57 0.00 45.31 1.40
6418 9773 9.140286 GGTATAATTTCTTTTGCTTTGGAGAAC 57.860 33.333 0.00 0.00 0.00 3.01
6438 9793 7.763071 GGAGAACCTTTTATATGTAACTGACGT 59.237 37.037 0.00 0.00 0.00 4.34
6465 9820 7.048000 CAAATGCATTTTGTAAATAGCGTGT 57.952 32.000 21.95 0.00 39.93 4.49
6471 9826 8.884726 TGCATTTTGTAAATAGCGTGTATAAGA 58.115 29.630 0.00 0.00 0.00 2.10
6472 9827 9.878599 GCATTTTGTAAATAGCGTGTATAAGAT 57.121 29.630 0.00 0.00 0.00 2.40
6506 9861 9.727627 CTTATCTAAATTTCTCAAACATGCTCC 57.272 33.333 0.00 0.00 0.00 4.70
6507 9862 7.951347 ATCTAAATTTCTCAAACATGCTCCT 57.049 32.000 0.00 0.00 0.00 3.69
6508 9863 7.149569 TCTAAATTTCTCAAACATGCTCCTG 57.850 36.000 0.00 0.00 0.00 3.86
6509 9864 5.796424 AAATTTCTCAAACATGCTCCTGT 57.204 34.783 0.00 0.00 0.00 4.00
6510 9865 5.796424 AATTTCTCAAACATGCTCCTGTT 57.204 34.783 0.00 0.00 41.01 3.16
6511 9866 6.899393 AATTTCTCAAACATGCTCCTGTTA 57.101 33.333 0.00 0.00 38.38 2.41
6512 9867 5.947228 TTTCTCAAACATGCTCCTGTTAG 57.053 39.130 0.00 0.00 38.38 2.34
6513 9868 4.890158 TCTCAAACATGCTCCTGTTAGA 57.110 40.909 0.00 0.15 38.38 2.10
6514 9869 4.825422 TCTCAAACATGCTCCTGTTAGAG 58.175 43.478 0.00 0.00 38.38 2.43
6515 9870 4.284490 TCTCAAACATGCTCCTGTTAGAGT 59.716 41.667 0.00 0.00 38.38 3.24
6516 9871 4.973168 TCAAACATGCTCCTGTTAGAGTT 58.027 39.130 0.00 0.00 38.38 3.01
6517 9872 6.014584 TCTCAAACATGCTCCTGTTAGAGTTA 60.015 38.462 0.00 0.00 38.38 2.24
6518 9873 6.711277 TCAAACATGCTCCTGTTAGAGTTAT 58.289 36.000 0.00 0.00 38.38 1.89
6519 9874 7.847096 TCAAACATGCTCCTGTTAGAGTTATA 58.153 34.615 0.00 0.00 38.38 0.98
6520 9875 8.318412 TCAAACATGCTCCTGTTAGAGTTATAA 58.682 33.333 0.00 0.00 38.38 0.98
6521 9876 9.113838 CAAACATGCTCCTGTTAGAGTTATAAT 57.886 33.333 0.00 0.00 38.38 1.28
6527 9882 9.824216 TGCTCCTGTTAGAGTTATAATATAGGT 57.176 33.333 0.00 0.00 36.20 3.08
6549 9904 7.506328 GGTCATGTACCCCTTTGTATTTATC 57.494 40.000 0.00 0.00 43.16 1.75
6550 9905 6.489022 GGTCATGTACCCCTTTGTATTTATCC 59.511 42.308 0.00 0.00 43.16 2.59
6551 9906 6.489022 GTCATGTACCCCTTTGTATTTATCCC 59.511 42.308 0.00 0.00 0.00 3.85
6552 9907 5.038651 TGTACCCCTTTGTATTTATCCCG 57.961 43.478 0.00 0.00 0.00 5.14
6553 9908 4.474287 TGTACCCCTTTGTATTTATCCCGT 59.526 41.667 0.00 0.00 0.00 5.28
6554 9909 4.596354 ACCCCTTTGTATTTATCCCGTT 57.404 40.909 0.00 0.00 0.00 4.44
6555 9910 5.713760 ACCCCTTTGTATTTATCCCGTTA 57.286 39.130 0.00 0.00 0.00 3.18
6556 9911 6.270219 ACCCCTTTGTATTTATCCCGTTAT 57.730 37.500 0.00 0.00 0.00 1.89
6557 9912 7.391388 ACCCCTTTGTATTTATCCCGTTATA 57.609 36.000 0.00 0.00 0.00 0.98
6558 9913 7.992295 ACCCCTTTGTATTTATCCCGTTATAT 58.008 34.615 0.00 0.00 0.00 0.86
6559 9914 9.114938 ACCCCTTTGTATTTATCCCGTTATATA 57.885 33.333 0.00 0.00 0.00 0.86
6560 9915 9.962809 CCCCTTTGTATTTATCCCGTTATATAA 57.037 33.333 0.00 0.00 0.00 0.98
6569 9924 9.955102 ATTTATCCCGTTATATAAGAGGTTTCC 57.045 33.333 13.11 0.00 0.00 3.13
6570 9925 8.731591 TTATCCCGTTATATAAGAGGTTTCCT 57.268 34.615 13.11 0.00 36.03 3.36
6571 9926 9.827198 TTATCCCGTTATATAAGAGGTTTCCTA 57.173 33.333 13.11 0.00 31.76 2.94
6572 9927 7.530426 TCCCGTTATATAAGAGGTTTCCTAC 57.470 40.000 13.11 0.00 31.76 3.18
6573 9928 7.068702 TCCCGTTATATAAGAGGTTTCCTACA 58.931 38.462 13.11 0.00 31.76 2.74
6574 9929 7.731688 TCCCGTTATATAAGAGGTTTCCTACAT 59.268 37.037 13.11 0.00 31.76 2.29
6575 9930 9.028284 CCCGTTATATAAGAGGTTTCCTACATA 57.972 37.037 13.11 0.00 31.76 2.29
6582 9937 6.636454 AAGAGGTTTCCTACATATGTTCCA 57.364 37.500 14.77 0.00 31.76 3.53
6583 9938 5.990668 AGAGGTTTCCTACATATGTTCCAC 58.009 41.667 14.77 4.48 31.76 4.02
6584 9939 5.487488 AGAGGTTTCCTACATATGTTCCACA 59.513 40.000 14.77 0.00 31.76 4.17
6585 9940 5.497474 AGGTTTCCTACATATGTTCCACAC 58.503 41.667 14.77 6.19 28.47 3.82
6586 9941 4.638865 GGTTTCCTACATATGTTCCACACC 59.361 45.833 14.77 11.35 0.00 4.16
6587 9942 5.497474 GTTTCCTACATATGTTCCACACCT 58.503 41.667 14.77 0.00 0.00 4.00
6588 9943 4.753516 TCCTACATATGTTCCACACCTG 57.246 45.455 14.77 0.00 0.00 4.00
6589 9944 4.101114 TCCTACATATGTTCCACACCTGT 58.899 43.478 14.77 0.00 32.81 4.00
6590 9945 5.274015 TCCTACATATGTTCCACACCTGTA 58.726 41.667 14.77 0.00 31.28 2.74
6591 9946 5.128171 TCCTACATATGTTCCACACCTGTAC 59.872 44.000 14.77 0.00 31.28 2.90
6592 9947 4.901197 ACATATGTTCCACACCTGTACA 57.099 40.909 1.41 0.00 28.15 2.90
6593 9948 5.435686 ACATATGTTCCACACCTGTACAT 57.564 39.130 1.41 0.00 34.18 2.29
6594 9949 5.185454 ACATATGTTCCACACCTGTACATG 58.815 41.667 1.41 0.00 32.23 3.21
6595 9950 3.788227 ATGTTCCACACCTGTACATGT 57.212 42.857 2.69 2.69 0.00 3.21
6596 9951 4.901197 ATGTTCCACACCTGTACATGTA 57.099 40.909 0.08 0.08 0.00 2.29
6597 9952 4.901197 TGTTCCACACCTGTACATGTAT 57.099 40.909 9.18 0.00 0.00 2.29
6598 9953 6.553953 ATGTTCCACACCTGTACATGTATA 57.446 37.500 9.18 5.40 0.00 1.47
6599 9954 6.553953 TGTTCCACACCTGTACATGTATAT 57.446 37.500 9.18 0.00 0.00 0.86
6600 9955 7.663043 TGTTCCACACCTGTACATGTATATA 57.337 36.000 9.18 0.00 0.00 0.86
6601 9956 8.257602 TGTTCCACACCTGTACATGTATATAT 57.742 34.615 9.18 0.00 0.00 0.86
6602 9957 9.369672 TGTTCCACACCTGTACATGTATATATA 57.630 33.333 9.18 0.00 0.00 0.86
6605 9960 8.899771 TCCACACCTGTACATGTATATATATCG 58.100 37.037 9.18 0.00 0.00 2.92
6606 9961 8.135529 CCACACCTGTACATGTATATATATCGG 58.864 40.741 9.18 5.41 0.00 4.18
6607 9962 7.648112 CACACCTGTACATGTATATATATCGGC 59.352 40.741 9.18 0.00 0.00 5.54
6608 9963 7.145985 CACCTGTACATGTATATATATCGGCC 58.854 42.308 9.18 0.00 0.00 6.13
6609 9964 7.014326 CACCTGTACATGTATATATATCGGCCT 59.986 40.741 9.18 0.00 0.00 5.19
6610 9965 8.222637 ACCTGTACATGTATATATATCGGCCTA 58.777 37.037 9.18 0.00 0.00 3.93
6611 9966 9.244292 CCTGTACATGTATATATATCGGCCTAT 57.756 37.037 9.18 0.00 0.00 2.57
6613 9968 9.020731 TGTACATGTATATATATCGGCCTATGG 57.979 37.037 9.18 0.00 0.00 2.74
6629 9984 4.371624 CTATGGCCTCATGGGAATACAA 57.628 45.455 3.32 0.00 37.23 2.41
6630 9985 2.734755 TGGCCTCATGGGAATACAAG 57.265 50.000 3.32 0.00 37.23 3.16
6631 9986 1.922447 TGGCCTCATGGGAATACAAGT 59.078 47.619 3.32 0.00 37.23 3.16
6632 9987 2.311542 TGGCCTCATGGGAATACAAGTT 59.688 45.455 3.32 0.00 37.23 2.66
6633 9988 2.689983 GGCCTCATGGGAATACAAGTTG 59.310 50.000 0.00 0.00 37.23 3.16
6634 9989 2.099756 GCCTCATGGGAATACAAGTTGC 59.900 50.000 1.81 0.00 37.23 4.17
6635 9990 3.624777 CCTCATGGGAATACAAGTTGCT 58.375 45.455 1.81 0.00 37.23 3.91
6636 9991 4.019174 CCTCATGGGAATACAAGTTGCTT 58.981 43.478 1.81 0.00 37.23 3.91
6637 9992 5.192927 CCTCATGGGAATACAAGTTGCTTA 58.807 41.667 1.81 0.00 37.23 3.09
6638 9993 5.829924 CCTCATGGGAATACAAGTTGCTTAT 59.170 40.000 1.81 0.00 37.23 1.73
6639 9994 6.322201 CCTCATGGGAATACAAGTTGCTTATT 59.678 38.462 1.81 0.58 37.23 1.40
6640 9995 7.333528 TCATGGGAATACAAGTTGCTTATTC 57.666 36.000 13.88 13.88 0.00 1.75
6641 9996 6.321181 TCATGGGAATACAAGTTGCTTATTCC 59.679 38.462 24.35 24.35 43.17 3.01
6642 9997 5.826643 TGGGAATACAAGTTGCTTATTCCT 58.173 37.500 27.77 4.94 43.33 3.36
6643 9998 6.964464 TGGGAATACAAGTTGCTTATTCCTA 58.036 36.000 27.77 23.73 43.33 2.94
6644 9999 7.406916 TGGGAATACAAGTTGCTTATTCCTAA 58.593 34.615 27.77 19.95 43.33 2.69
6645 10000 7.338449 TGGGAATACAAGTTGCTTATTCCTAAC 59.662 37.037 27.77 19.00 43.33 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.402681 AGGAGTGACGGGGCATGG 61.403 66.667 0.00 0.00 0.00 3.66
1 2 2.124983 CAGGAGTGACGGGGCATG 60.125 66.667 0.00 0.00 0.00 4.06
2 3 4.101448 GCAGGAGTGACGGGGCAT 62.101 66.667 0.00 0.00 0.00 4.40
5 6 3.612247 CTTGGCAGGAGTGACGGGG 62.612 68.421 0.00 0.00 32.20 5.73
7 8 1.079543 CTCTTGGCAGGAGTGACGG 60.080 63.158 17.73 0.00 32.20 4.79
8 9 0.318441 TTCTCTTGGCAGGAGTGACG 59.682 55.000 23.79 1.64 32.20 4.35
9 10 1.609320 GGTTCTCTTGGCAGGAGTGAC 60.609 57.143 23.79 21.31 33.06 3.67
10 11 0.687354 GGTTCTCTTGGCAGGAGTGA 59.313 55.000 23.79 12.67 33.06 3.41
11 12 0.397941 TGGTTCTCTTGGCAGGAGTG 59.602 55.000 23.79 4.36 33.06 3.51
12 13 1.140312 TTGGTTCTCTTGGCAGGAGT 58.860 50.000 23.79 0.00 33.06 3.85
13 14 1.882623 GTTTGGTTCTCTTGGCAGGAG 59.117 52.381 19.67 19.67 0.00 3.69
14 15 1.494721 AGTTTGGTTCTCTTGGCAGGA 59.505 47.619 0.00 0.00 0.00 3.86
15 16 1.986882 AGTTTGGTTCTCTTGGCAGG 58.013 50.000 0.00 0.00 0.00 4.85
16 17 3.077359 CCTAGTTTGGTTCTCTTGGCAG 58.923 50.000 0.00 0.00 0.00 4.85
17 18 2.224769 CCCTAGTTTGGTTCTCTTGGCA 60.225 50.000 0.00 0.00 0.00 4.92
18 19 2.224793 ACCCTAGTTTGGTTCTCTTGGC 60.225 50.000 0.00 0.00 29.75 4.52
19 20 3.790089 ACCCTAGTTTGGTTCTCTTGG 57.210 47.619 0.00 0.00 29.75 3.61
20 21 6.059484 TGTAAACCCTAGTTTGGTTCTCTTG 58.941 40.000 2.78 0.00 45.23 3.02
21 22 6.256643 TGTAAACCCTAGTTTGGTTCTCTT 57.743 37.500 2.78 0.00 45.23 2.85
22 23 5.899631 TGTAAACCCTAGTTTGGTTCTCT 57.100 39.130 2.78 0.00 45.23 3.10
23 24 6.017357 CACTTGTAAACCCTAGTTTGGTTCTC 60.017 42.308 2.78 1.36 45.23 2.87
24 25 5.826208 CACTTGTAAACCCTAGTTTGGTTCT 59.174 40.000 2.78 0.00 45.23 3.01
25 26 5.009310 CCACTTGTAAACCCTAGTTTGGTTC 59.991 44.000 2.78 0.00 45.23 3.62
27 28 4.079615 ACCACTTGTAAACCCTAGTTTGGT 60.080 41.667 1.55 0.00 45.77 3.67
28 29 4.277423 CACCACTTGTAAACCCTAGTTTGG 59.723 45.833 1.55 0.00 45.77 3.28
29 30 4.885325 ACACCACTTGTAAACCCTAGTTTG 59.115 41.667 1.55 0.00 45.77 2.93
31 32 4.783560 ACACCACTTGTAAACCCTAGTT 57.216 40.909 0.00 0.00 36.32 2.24
32 33 4.262164 CGTACACCACTTGTAAACCCTAGT 60.262 45.833 0.00 0.00 42.56 2.57
33 34 4.022068 TCGTACACCACTTGTAAACCCTAG 60.022 45.833 0.00 0.00 42.56 3.02
34 35 3.894427 TCGTACACCACTTGTAAACCCTA 59.106 43.478 0.00 0.00 42.56 3.53
35 36 2.699846 TCGTACACCACTTGTAAACCCT 59.300 45.455 0.00 0.00 42.56 4.34
36 37 2.802247 GTCGTACACCACTTGTAAACCC 59.198 50.000 0.00 0.00 42.56 4.11
37 38 2.802247 GGTCGTACACCACTTGTAAACC 59.198 50.000 8.95 0.00 45.98 3.27
52 53 4.728102 CTTGGGCGCACGGTCGTA 62.728 66.667 10.83 0.00 0.00 3.43
55 56 3.723348 GTTCTTGGGCGCACGGTC 61.723 66.667 10.83 0.00 0.00 4.79
56 57 3.842925 ATGTTCTTGGGCGCACGGT 62.843 57.895 10.83 0.00 0.00 4.83
57 58 3.039202 GATGTTCTTGGGCGCACGG 62.039 63.158 10.83 2.20 0.00 4.94
58 59 2.324330 TGATGTTCTTGGGCGCACG 61.324 57.895 10.83 0.79 0.00 5.34
59 60 1.210155 GTGATGTTCTTGGGCGCAC 59.790 57.895 10.83 6.04 0.00 5.34
60 61 0.821301 TTGTGATGTTCTTGGGCGCA 60.821 50.000 10.83 0.00 0.00 6.09
61 62 0.313672 TTTGTGATGTTCTTGGGCGC 59.686 50.000 0.00 0.00 0.00 6.53
62 63 2.607771 CCTTTTGTGATGTTCTTGGGCG 60.608 50.000 0.00 0.00 0.00 6.13
63 64 2.365293 ACCTTTTGTGATGTTCTTGGGC 59.635 45.455 0.00 0.00 0.00 5.36
538 539 1.230324 GTTTCTGTGCACCTCTGACC 58.770 55.000 15.69 0.00 0.00 4.02
539 540 1.869767 CTGTTTCTGTGCACCTCTGAC 59.130 52.381 15.69 7.39 0.00 3.51
540 541 1.202687 CCTGTTTCTGTGCACCTCTGA 60.203 52.381 15.69 4.64 0.00 3.27
541 542 1.233019 CCTGTTTCTGTGCACCTCTG 58.767 55.000 15.69 2.09 0.00 3.35
542 543 0.839946 ACCTGTTTCTGTGCACCTCT 59.160 50.000 15.69 0.00 0.00 3.69
543 544 0.947244 CACCTGTTTCTGTGCACCTC 59.053 55.000 15.69 0.79 0.00 3.85
544 545 3.100545 CACCTGTTTCTGTGCACCT 57.899 52.632 15.69 0.00 0.00 4.00
549 550 6.676950 TGTTTTATATGCACCTGTTTCTGTG 58.323 36.000 0.00 0.00 35.58 3.66
550 551 6.071952 CCTGTTTTATATGCACCTGTTTCTGT 60.072 38.462 0.00 0.00 0.00 3.41
551 552 6.324819 CCTGTTTTATATGCACCTGTTTCTG 58.675 40.000 0.00 0.00 0.00 3.02
552 553 5.105756 GCCTGTTTTATATGCACCTGTTTCT 60.106 40.000 0.00 0.00 0.00 2.52
553 554 5.102313 GCCTGTTTTATATGCACCTGTTTC 58.898 41.667 0.00 0.00 0.00 2.78
554 555 4.081697 GGCCTGTTTTATATGCACCTGTTT 60.082 41.667 0.00 0.00 0.00 2.83
555 556 3.447229 GGCCTGTTTTATATGCACCTGTT 59.553 43.478 0.00 0.00 0.00 3.16
556 557 3.023832 GGCCTGTTTTATATGCACCTGT 58.976 45.455 0.00 0.00 0.00 4.00
557 558 3.023119 TGGCCTGTTTTATATGCACCTG 58.977 45.455 3.32 0.00 0.00 4.00
558 559 3.380471 TGGCCTGTTTTATATGCACCT 57.620 42.857 3.32 0.00 0.00 4.00
559 560 3.181476 CCTTGGCCTGTTTTATATGCACC 60.181 47.826 3.32 0.00 0.00 5.01
560 561 3.737972 GCCTTGGCCTGTTTTATATGCAC 60.738 47.826 3.32 0.00 0.00 4.57
561 562 2.430332 GCCTTGGCCTGTTTTATATGCA 59.570 45.455 3.32 0.00 0.00 3.96
562 563 2.543653 CGCCTTGGCCTGTTTTATATGC 60.544 50.000 3.32 0.00 0.00 3.14
563 564 2.543653 GCGCCTTGGCCTGTTTTATATG 60.544 50.000 3.32 0.00 0.00 1.78
564 565 1.681264 GCGCCTTGGCCTGTTTTATAT 59.319 47.619 3.32 0.00 0.00 0.86
565 566 1.099689 GCGCCTTGGCCTGTTTTATA 58.900 50.000 3.32 0.00 0.00 0.98
566 567 1.890174 GCGCCTTGGCCTGTTTTAT 59.110 52.632 3.32 0.00 0.00 1.40
567 568 3.361174 GCGCCTTGGCCTGTTTTA 58.639 55.556 3.32 0.00 0.00 1.52
583 584 3.701604 AAGTGATCTCGCCGTCGGC 62.702 63.158 26.69 26.69 46.75 5.54
584 585 1.874019 CAAGTGATCTCGCCGTCGG 60.874 63.158 6.99 6.99 36.13 4.79
585 586 1.874019 CCAAGTGATCTCGCCGTCG 60.874 63.158 0.00 0.00 0.00 5.12
586 587 2.167861 GCCAAGTGATCTCGCCGTC 61.168 63.158 0.00 0.00 0.00 4.79
587 588 2.125512 GCCAAGTGATCTCGCCGT 60.126 61.111 0.00 0.00 0.00 5.68
588 589 3.257561 CGCCAAGTGATCTCGCCG 61.258 66.667 0.00 0.00 0.00 6.46
589 590 2.892425 CCGCCAAGTGATCTCGCC 60.892 66.667 0.00 0.00 0.00 5.54
590 591 3.567797 GCCGCCAAGTGATCTCGC 61.568 66.667 0.00 0.00 0.00 5.03
591 592 3.257561 CGCCGCCAAGTGATCTCG 61.258 66.667 0.00 0.00 0.00 4.04
592 593 2.892425 CCGCCGCCAAGTGATCTC 60.892 66.667 0.00 0.00 0.00 2.75
593 594 4.473520 CCCGCCGCCAAGTGATCT 62.474 66.667 0.00 0.00 0.00 2.75
612 613 3.628646 ATCTTGCCCACGCTCCACC 62.629 63.158 0.00 0.00 35.36 4.61
613 614 2.045926 ATCTTGCCCACGCTCCAC 60.046 61.111 0.00 0.00 35.36 4.02
614 615 2.268920 GATCTTGCCCACGCTCCA 59.731 61.111 0.00 0.00 35.36 3.86
615 616 1.817099 CAGATCTTGCCCACGCTCC 60.817 63.158 0.00 0.00 35.36 4.70
616 617 0.179062 ATCAGATCTTGCCCACGCTC 60.179 55.000 0.00 0.00 35.36 5.03
617 618 0.179062 GATCAGATCTTGCCCACGCT 60.179 55.000 2.81 0.00 35.36 5.07
618 619 1.493950 CGATCAGATCTTGCCCACGC 61.494 60.000 8.82 0.00 0.00 5.34
619 620 1.493950 GCGATCAGATCTTGCCCACG 61.494 60.000 8.82 0.00 0.00 4.94
620 621 1.162800 GGCGATCAGATCTTGCCCAC 61.163 60.000 15.31 0.00 39.83 4.61
621 622 1.146930 GGCGATCAGATCTTGCCCA 59.853 57.895 15.31 0.00 39.83 5.36
622 623 4.055654 GGCGATCAGATCTTGCCC 57.944 61.111 15.31 4.82 39.83 5.36
623 624 0.602372 GAGGGCGATCAGATCTTGCC 60.602 60.000 17.14 17.14 44.98 4.52
624 625 0.105593 TGAGGGCGATCAGATCTTGC 59.894 55.000 8.82 5.40 0.00 4.01
625 626 1.863267 GTGAGGGCGATCAGATCTTG 58.137 55.000 8.82 0.00 0.00 3.02
626 627 0.387202 CGTGAGGGCGATCAGATCTT 59.613 55.000 8.82 0.00 0.00 2.40
627 628 0.466372 TCGTGAGGGCGATCAGATCT 60.466 55.000 8.82 0.00 35.83 2.75
628 629 2.033793 TCGTGAGGGCGATCAGATC 58.966 57.895 0.00 0.00 35.83 2.75
629 630 4.259952 TCGTGAGGGCGATCAGAT 57.740 55.556 0.00 0.00 35.83 2.90
635 636 2.755876 AGCTGATCGTGAGGGCGA 60.756 61.111 0.00 0.00 45.32 5.54
636 637 2.279120 GAGCTGATCGTGAGGGCG 60.279 66.667 0.00 0.00 0.00 6.13
637 638 1.067250 GAGAGCTGATCGTGAGGGC 59.933 63.158 0.00 0.00 0.00 5.19
638 639 1.739049 GGAGAGCTGATCGTGAGGG 59.261 63.158 0.00 0.00 0.00 4.30
639 640 1.098129 TCGGAGAGCTGATCGTGAGG 61.098 60.000 0.00 0.00 0.00 3.86
640 641 0.028770 GTCGGAGAGCTGATCGTGAG 59.971 60.000 0.00 0.00 36.95 3.51
641 642 0.676782 TGTCGGAGAGCTGATCGTGA 60.677 55.000 0.00 0.00 36.95 4.35
642 643 0.171231 TTGTCGGAGAGCTGATCGTG 59.829 55.000 0.00 0.00 36.95 4.35
643 644 1.107114 ATTGTCGGAGAGCTGATCGT 58.893 50.000 0.00 0.00 36.95 3.73
644 645 2.215907 AATTGTCGGAGAGCTGATCG 57.784 50.000 0.00 0.00 36.95 3.69
645 646 3.046390 CGTAATTGTCGGAGAGCTGATC 58.954 50.000 0.00 0.00 36.95 2.92
646 647 2.799917 GCGTAATTGTCGGAGAGCTGAT 60.800 50.000 0.00 0.00 36.95 2.90
647 648 1.469251 GCGTAATTGTCGGAGAGCTGA 60.469 52.381 0.00 0.00 36.95 4.26
648 649 0.924090 GCGTAATTGTCGGAGAGCTG 59.076 55.000 0.00 0.00 36.95 4.24
649 650 0.818296 AGCGTAATTGTCGGAGAGCT 59.182 50.000 0.00 0.00 36.95 4.09
650 651 2.486951 TAGCGTAATTGTCGGAGAGC 57.513 50.000 6.91 0.00 36.95 4.09
651 652 3.114065 GGTTAGCGTAATTGTCGGAGAG 58.886 50.000 6.91 0.00 36.95 3.20
652 653 2.478370 CGGTTAGCGTAATTGTCGGAGA 60.478 50.000 0.00 0.00 0.00 3.71
653 654 1.850441 CGGTTAGCGTAATTGTCGGAG 59.150 52.381 0.00 0.00 0.00 4.63
654 655 1.202114 ACGGTTAGCGTAATTGTCGGA 59.798 47.619 7.95 0.00 0.00 4.55
655 656 1.585214 GACGGTTAGCGTAATTGTCGG 59.415 52.381 10.04 0.00 0.00 4.79
656 657 2.027214 GTGACGGTTAGCGTAATTGTCG 59.973 50.000 10.04 0.00 31.42 4.35
657 658 2.346545 GGTGACGGTTAGCGTAATTGTC 59.653 50.000 10.04 0.00 0.00 3.18
658 659 2.340337 GGTGACGGTTAGCGTAATTGT 58.660 47.619 10.04 0.00 0.00 2.71
659 660 1.662122 GGGTGACGGTTAGCGTAATTG 59.338 52.381 10.04 0.00 0.00 2.32
660 661 1.275856 TGGGTGACGGTTAGCGTAATT 59.724 47.619 10.04 0.00 0.00 1.40
661 662 0.896923 TGGGTGACGGTTAGCGTAAT 59.103 50.000 10.04 0.00 0.00 1.89
662 663 0.678395 TTGGGTGACGGTTAGCGTAA 59.322 50.000 10.04 0.00 0.00 3.18
663 664 0.244450 CTTGGGTGACGGTTAGCGTA 59.756 55.000 10.04 0.00 0.00 4.42
664 665 1.005394 CTTGGGTGACGGTTAGCGT 60.005 57.895 9.81 9.81 0.00 5.07
665 666 1.740296 CCTTGGGTGACGGTTAGCG 60.740 63.158 1.14 1.14 0.00 4.26
666 667 1.376812 CCCTTGGGTGACGGTTAGC 60.377 63.158 0.00 0.00 0.00 3.09
667 668 0.036671 GTCCCTTGGGTGACGGTTAG 60.037 60.000 5.51 0.00 0.00 2.34
668 669 2.060370 GTCCCTTGGGTGACGGTTA 58.940 57.895 5.51 0.00 0.00 2.85
669 670 2.833957 GTCCCTTGGGTGACGGTT 59.166 61.111 5.51 0.00 0.00 4.44
673 674 1.765597 AAGTCCGTCCCTTGGGTGAC 61.766 60.000 5.51 10.64 0.00 3.67
674 675 1.460689 AAGTCCGTCCCTTGGGTGA 60.461 57.895 5.51 0.00 0.00 4.02
675 676 1.302511 CAAGTCCGTCCCTTGGGTG 60.303 63.158 5.51 0.02 36.50 4.61
676 677 3.157680 CAAGTCCGTCCCTTGGGT 58.842 61.111 5.51 0.00 36.50 4.51
677 678 2.359975 GCAAGTCCGTCCCTTGGG 60.360 66.667 0.00 0.00 39.72 4.12
678 679 2.359975 GGCAAGTCCGTCCCTTGG 60.360 66.667 7.71 0.00 39.72 3.61
679 680 2.359975 GGGCAAGTCCGTCCCTTG 60.360 66.667 0.00 0.00 41.75 3.61
680 681 2.457323 TTGGGCAAGTCCGTCCCTT 61.457 57.895 0.00 0.00 40.69 3.95
681 682 2.852075 TTGGGCAAGTCCGTCCCT 60.852 61.111 0.00 0.00 40.69 4.20
682 683 2.671963 GTTGGGCAAGTCCGTCCC 60.672 66.667 0.00 0.00 40.47 4.46
683 684 2.671963 GGTTGGGCAAGTCCGTCC 60.672 66.667 0.00 0.00 34.94 4.79
684 685 2.671963 GGGTTGGGCAAGTCCGTC 60.672 66.667 0.00 0.00 34.94 4.79
685 686 4.280019 GGGGTTGGGCAAGTCCGT 62.280 66.667 0.00 0.00 34.94 4.69
686 687 4.278513 TGGGGTTGGGCAAGTCCG 62.279 66.667 0.00 0.00 34.94 4.79
687 688 2.283173 CTGGGGTTGGGCAAGTCC 60.283 66.667 0.00 0.00 0.00 3.85
688 689 2.991540 GCTGGGGTTGGGCAAGTC 60.992 66.667 0.00 0.00 0.00 3.01
689 690 3.511610 AGCTGGGGTTGGGCAAGT 61.512 61.111 0.00 0.00 0.00 3.16
690 691 2.993264 CAGCTGGGGTTGGGCAAG 60.993 66.667 5.57 0.00 0.00 4.01
691 692 4.619320 CCAGCTGGGGTTGGGCAA 62.619 66.667 26.14 0.00 39.68 4.52
693 694 2.723464 TTTACCAGCTGGGGTTGGGC 62.723 60.000 35.42 0.00 46.23 5.36
694 695 0.178947 TTTTACCAGCTGGGGTTGGG 60.179 55.000 35.42 10.23 46.23 4.12
695 696 6.976351 AAAGAATTTTACCAGCTGGGGTTGG 61.976 44.000 35.42 12.00 41.81 3.77
696 697 3.165071 AGAATTTTACCAGCTGGGGTTG 58.835 45.455 35.42 11.57 42.42 3.77
697 698 3.542969 AGAATTTTACCAGCTGGGGTT 57.457 42.857 35.42 21.00 42.42 4.11
698 699 3.542969 AAGAATTTTACCAGCTGGGGT 57.457 42.857 35.42 19.06 45.10 4.95
699 700 3.831911 TCAAAGAATTTTACCAGCTGGGG 59.168 43.478 35.42 13.50 37.25 4.96
700 701 5.467035 TTCAAAGAATTTTACCAGCTGGG 57.533 39.130 35.42 18.18 35.03 4.45
701 702 7.260603 CCTATTCAAAGAATTTTACCAGCTGG 58.739 38.462 31.60 31.60 35.03 4.85
702 703 7.260603 CCCTATTCAAAGAATTTTACCAGCTG 58.739 38.462 6.78 6.78 35.03 4.24
703 704 6.381133 CCCCTATTCAAAGAATTTTACCAGCT 59.619 38.462 0.00 0.00 35.03 4.24
704 705 6.406961 CCCCCTATTCAAAGAATTTTACCAGC 60.407 42.308 0.00 0.00 35.03 4.85
705 706 6.406961 GCCCCCTATTCAAAGAATTTTACCAG 60.407 42.308 0.00 0.00 35.03 4.00
706 707 5.423931 GCCCCCTATTCAAAGAATTTTACCA 59.576 40.000 0.00 0.00 35.03 3.25
707 708 5.163343 GGCCCCCTATTCAAAGAATTTTACC 60.163 44.000 0.00 0.00 35.03 2.85
708 709 5.163343 GGGCCCCCTATTCAAAGAATTTTAC 60.163 44.000 12.23 0.00 35.03 2.01
709 710 4.966168 GGGCCCCCTATTCAAAGAATTTTA 59.034 41.667 12.23 0.00 35.03 1.52
710 711 3.780294 GGGCCCCCTATTCAAAGAATTTT 59.220 43.478 12.23 0.00 35.03 1.82
711 712 3.013994 AGGGCCCCCTATTCAAAGAATTT 59.986 43.478 21.43 0.00 46.14 1.82
712 713 2.592036 AGGGCCCCCTATTCAAAGAATT 59.408 45.455 21.43 0.00 46.14 2.17
713 714 2.226795 AGGGCCCCCTATTCAAAGAAT 58.773 47.619 21.43 0.00 46.14 2.40
714 715 1.693799 AGGGCCCCCTATTCAAAGAA 58.306 50.000 21.43 0.00 46.14 2.52
715 716 3.454294 AGGGCCCCCTATTCAAAGA 57.546 52.632 21.43 0.00 46.14 2.52
785 786 0.538287 GCTCTTGGACCAACTTGCCT 60.538 55.000 1.69 0.00 0.00 4.75
829 830 1.620819 GAGCCTTGAGGTGACAGAAGA 59.379 52.381 0.00 0.00 37.57 2.87
836 837 3.072476 GCTGGAGCCTTGAGGTGA 58.928 61.111 0.00 0.00 37.57 4.02
887 888 2.042944 GGGTTTGGGGGAGGATGC 60.043 66.667 0.00 0.00 0.00 3.91
984 1344 2.755876 ATCGTGCTCTCTCGCCCA 60.756 61.111 0.00 0.00 0.00 5.36
1023 1383 1.443407 CCTGTCGAAGATGGCGGAT 59.557 57.895 0.00 0.00 40.67 4.18
1073 1433 0.035458 GAGGGAGGCAACGATATGGG 59.965 60.000 0.00 0.00 46.39 4.00
1074 1434 1.001406 GAGAGGGAGGCAACGATATGG 59.999 57.143 0.00 0.00 46.39 2.74
1077 1437 2.160721 AAGAGAGGGAGGCAACGATA 57.839 50.000 0.00 0.00 46.39 2.92
1078 1438 1.280457 AAAGAGAGGGAGGCAACGAT 58.720 50.000 0.00 0.00 46.39 3.73
1079 1439 1.549170 GTAAAGAGAGGGAGGCAACGA 59.451 52.381 0.00 0.00 46.39 3.85
1080 1440 1.405661 GGTAAAGAGAGGGAGGCAACG 60.406 57.143 0.00 0.00 46.39 4.10
1081 1441 1.909986 AGGTAAAGAGAGGGAGGCAAC 59.090 52.381 0.00 0.00 0.00 4.17
1082 1442 2.344093 AGGTAAAGAGAGGGAGGCAA 57.656 50.000 0.00 0.00 0.00 4.52
1083 1443 2.188817 GAAGGTAAAGAGAGGGAGGCA 58.811 52.381 0.00 0.00 0.00 4.75
1179 1568 6.961554 GTCTTAACAGCACGGAATTTAGAATG 59.038 38.462 0.00 0.00 0.00 2.67
1255 1648 8.204836 AGTAGTAAACCATGTGAGGATTGTATC 58.795 37.037 0.00 0.00 0.00 2.24
1256 1649 8.090788 AGTAGTAAACCATGTGAGGATTGTAT 57.909 34.615 0.00 0.00 0.00 2.29
1258 1651 6.374417 AGTAGTAAACCATGTGAGGATTGT 57.626 37.500 0.00 0.00 0.00 2.71
1385 1821 0.591236 CGCGGGCACGATTATTTTGG 60.591 55.000 15.48 0.00 44.60 3.28
1399 1835 4.254745 GAAGTAAATTACACTTCGCGGG 57.745 45.455 6.13 1.80 41.67 6.13
1407 1843 9.855021 AATTATGTGCCAAGAAGTAAATTACAC 57.145 29.630 5.89 0.00 0.00 2.90
1426 1862 7.883311 ACTCTAACTTGTACAAGGCAATTATGT 59.117 33.333 33.11 20.49 42.53 2.29
1460 2125 1.003545 CCATTGCCTTCGATTAGCACG 60.004 52.381 4.23 0.00 35.96 5.34
1557 2222 1.335810 CCTGCATCCATCAATTCCACG 59.664 52.381 0.00 0.00 0.00 4.94
1562 2227 2.154567 ACTGCCTGCATCCATCAATT 57.845 45.000 0.00 0.00 0.00 2.32
1652 2317 2.071844 AACAACAGCAGCAGCAGCAG 62.072 55.000 12.92 6.60 45.49 4.24
1653 2318 1.669049 AAACAACAGCAGCAGCAGCA 61.669 50.000 12.92 0.00 45.49 4.41
1654 2319 0.938168 GAAACAACAGCAGCAGCAGC 60.938 55.000 3.17 0.46 45.49 5.25
1854 2526 1.263217 AGTTTTTAGTGGACTTGCGCG 59.737 47.619 0.00 0.00 0.00 6.86
1855 2527 3.042887 CAAGTTTTTAGTGGACTTGCGC 58.957 45.455 0.00 0.00 42.38 6.09
1912 2584 3.192466 GGTCAATTTTGGAGCATCATGC 58.808 45.455 0.00 0.00 45.46 4.06
1913 2585 3.449737 AGGGTCAATTTTGGAGCATCATG 59.550 43.478 0.00 0.00 36.25 3.07
1914 2586 3.449737 CAGGGTCAATTTTGGAGCATCAT 59.550 43.478 0.00 0.00 36.25 2.45
1915 2587 2.827322 CAGGGTCAATTTTGGAGCATCA 59.173 45.455 0.00 0.00 36.25 3.07
1916 2588 2.417787 GCAGGGTCAATTTTGGAGCATC 60.418 50.000 0.00 0.00 34.56 3.91
1917 2589 1.551883 GCAGGGTCAATTTTGGAGCAT 59.448 47.619 0.00 0.00 34.56 3.79
1918 2590 0.968405 GCAGGGTCAATTTTGGAGCA 59.032 50.000 0.00 0.00 34.56 4.26
1919 2591 0.968405 TGCAGGGTCAATTTTGGAGC 59.032 50.000 0.00 0.00 0.00 4.70
1920 2592 3.070015 AGTTTGCAGGGTCAATTTTGGAG 59.930 43.478 0.00 0.00 0.00 3.86
1921 2593 3.037549 AGTTTGCAGGGTCAATTTTGGA 58.962 40.909 0.00 0.00 0.00 3.53
1922 2594 3.473923 AGTTTGCAGGGTCAATTTTGG 57.526 42.857 0.00 0.00 0.00 3.28
1980 2700 3.877559 TGCTGAATTCCATACAGAGGTG 58.122 45.455 2.27 0.00 34.07 4.00
2008 2728 4.442706 AGCATATACAGTAGTTGTGGTGC 58.557 43.478 0.00 0.00 41.10 5.01
2298 3765 7.781693 AGTTTACGGAGGGAGTAGAATGTTATA 59.218 37.037 0.00 0.00 0.00 0.98
2310 3778 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2311 3779 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2312 3780 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2313 3781 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2314 3782 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2315 3783 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2316 3784 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2361 3829 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2362 3830 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2363 3831 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2364 3832 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2365 3833 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2373 3841 8.934697 TGCATATTACTCCCTCTGTAAACTAAT 58.065 33.333 0.00 0.00 34.20 1.73
2374 3842 8.313944 TGCATATTACTCCCTCTGTAAACTAA 57.686 34.615 0.00 0.00 34.20 2.24
2375 3843 7.907841 TGCATATTACTCCCTCTGTAAACTA 57.092 36.000 0.00 0.00 34.20 2.24
2376 3844 6.808321 TGCATATTACTCCCTCTGTAAACT 57.192 37.500 0.00 0.00 34.20 2.66
2377 3845 8.451908 AAATGCATATTACTCCCTCTGTAAAC 57.548 34.615 0.00 0.00 34.20 2.01
2378 3846 9.474313 AAAAATGCATATTACTCCCTCTGTAAA 57.526 29.630 0.00 0.00 34.20 2.01
2381 3849 8.903820 GTTAAAAATGCATATTACTCCCTCTGT 58.096 33.333 0.00 0.00 0.00 3.41
2382 3850 8.902806 TGTTAAAAATGCATATTACTCCCTCTG 58.097 33.333 0.00 0.00 0.00 3.35
2383 3851 9.646522 ATGTTAAAAATGCATATTACTCCCTCT 57.353 29.630 0.00 0.00 0.00 3.69
2487 3957 5.694006 GCAACGAAGCAGTGATCTATCTATT 59.306 40.000 0.00 0.00 0.00 1.73
2500 3970 2.208326 AAAGTTTGGCAACGAAGCAG 57.792 45.000 0.00 0.00 41.86 4.24
2501 3971 2.663826 AAAAGTTTGGCAACGAAGCA 57.336 40.000 0.00 0.00 41.86 3.91
2559 4031 2.568062 TCAACAACGCAGGGGTCTATTA 59.432 45.455 0.00 0.00 0.00 0.98
2571 4043 4.223320 TCTCCAATTCTTTCAACAACGC 57.777 40.909 0.00 0.00 0.00 4.84
2578 4050 6.119240 AGTGTCTGATCTCCAATTCTTTCA 57.881 37.500 0.00 0.00 0.00 2.69
2639 4112 7.479980 TGAACTGTTGAAAGGTAAAAGACATG 58.520 34.615 0.00 0.00 0.00 3.21
2640 4113 7.339466 ACTGAACTGTTGAAAGGTAAAAGACAT 59.661 33.333 0.00 0.00 0.00 3.06
2641 4114 6.657541 ACTGAACTGTTGAAAGGTAAAAGACA 59.342 34.615 0.00 0.00 0.00 3.41
2642 4115 7.085052 ACTGAACTGTTGAAAGGTAAAAGAC 57.915 36.000 0.00 0.00 0.00 3.01
2794 4297 7.824672 AGAAGAAAAGTGAGGCATTTATGAAG 58.175 34.615 0.00 0.00 0.00 3.02
2823 4326 6.363357 CGGAAAGAATGAACCTTTCAAATGAC 59.637 38.462 14.90 0.00 46.81 3.06
3242 4745 5.105635 ACACATCAAATACAGCTCCCATTTG 60.106 40.000 14.07 14.07 39.77 2.32
3642 5164 3.252701 GCCTGCCAGAACATGATATGAAG 59.747 47.826 0.00 0.00 0.00 3.02
3650 5172 2.872557 CGTGCCTGCCAGAACATG 59.127 61.111 0.00 0.00 0.00 3.21
3681 5203 5.527214 TGTTCACTTCTGTGTTACAAGGATG 59.473 40.000 0.00 0.00 44.14 3.51
3708 5230 4.821260 TGCACGACTGCCATATCATTAATT 59.179 37.500 0.00 0.00 43.51 1.40
3741 5263 2.490351 GGGCATCCATTCATCATCCTGT 60.490 50.000 0.00 0.00 0.00 4.00
4180 5715 6.610075 ACTACAATGATGGCTTCCAAAATT 57.390 33.333 0.00 0.00 36.95 1.82
4526 6066 9.918630 CTTCAACATAAGAAAAATTCACCTGAT 57.081 29.630 0.00 0.00 0.00 2.90
5215 8497 1.946768 TCTTGAAAAGTGCTGTTCGGG 59.053 47.619 0.00 0.00 46.34 5.14
5256 8538 4.039366 AGTTACCCTGAGTCAAGTGAACTC 59.961 45.833 5.86 0.00 0.00 3.01
5266 8548 2.628657 ACACACAGAGTTACCCTGAGTC 59.371 50.000 0.00 0.00 34.15 3.36
5267 8549 2.365617 CACACACAGAGTTACCCTGAGT 59.634 50.000 0.00 0.00 36.21 3.41
5268 8550 2.289072 CCACACACAGAGTTACCCTGAG 60.289 54.545 0.00 0.00 35.69 3.35
5269 8551 1.691976 CCACACACAGAGTTACCCTGA 59.308 52.381 0.00 0.00 35.69 3.86
5270 8552 1.416401 ACCACACACAGAGTTACCCTG 59.584 52.381 0.00 0.00 37.64 4.45
5271 8553 1.802553 ACCACACACAGAGTTACCCT 58.197 50.000 0.00 0.00 0.00 4.34
5272 8554 2.632987 AACCACACACAGAGTTACCC 57.367 50.000 0.00 0.00 0.00 3.69
5401 8698 3.452264 TGCAGGCATATGTTCTACTGAGT 59.548 43.478 4.29 0.00 0.00 3.41
5459 8756 3.362401 GCATGAGCACAGAATAATCGACG 60.362 47.826 0.00 0.00 41.58 5.12
5589 8887 3.003378 CCTTCTTCGTTGTTTCCTGAACC 59.997 47.826 0.00 0.00 37.45 3.62
5673 8971 2.238144 TCCCTGAAAGAGCATGGAAGAG 59.762 50.000 0.00 0.00 34.07 2.85
5736 9040 3.365465 CGGATTTGCAACGATTTGGTACA 60.365 43.478 0.00 0.00 32.81 2.90
5740 9044 2.250188 GTCGGATTTGCAACGATTTGG 58.750 47.619 12.92 0.00 38.99 3.28
5780 9084 4.341235 AGATAGCGCACCTACATTGACTTA 59.659 41.667 11.47 0.00 0.00 2.24
5905 9216 5.599656 AGTGTAACACTAAAGTAGACCCACA 59.400 40.000 0.00 0.00 43.46 4.17
5969 9308 0.108138 CACCGAACCTCTCCATCACC 60.108 60.000 0.00 0.00 0.00 4.02
5971 9310 1.482182 CATCACCGAACCTCTCCATCA 59.518 52.381 0.00 0.00 0.00 3.07
5972 9311 1.757118 TCATCACCGAACCTCTCCATC 59.243 52.381 0.00 0.00 0.00 3.51
5973 9312 1.759445 CTCATCACCGAACCTCTCCAT 59.241 52.381 0.00 0.00 0.00 3.41
5993 9332 7.333528 AGCTAGCTGATATAGATACAGAAGC 57.666 40.000 18.57 0.00 39.80 3.86
6017 9356 0.555769 AGGACCTTGAAACCAGGCAA 59.444 50.000 0.00 0.00 0.00 4.52
6090 9429 4.260456 CGCCAAAGTTTACAGAGACGAAAA 60.260 41.667 0.00 0.00 0.00 2.29
6203 9542 1.095228 AATTACCATCCGGCAGCACG 61.095 55.000 0.00 0.00 34.57 5.34
6209 9548 4.546570 GAAGCATAAAATTACCATCCGGC 58.453 43.478 0.00 0.00 34.57 6.13
6210 9549 4.827284 AGGAAGCATAAAATTACCATCCGG 59.173 41.667 0.00 0.00 38.77 5.14
6227 9566 2.166664 ACATCAGTCGGAAGTAGGAAGC 59.833 50.000 0.00 0.00 0.00 3.86
6241 9580 3.697045 GGACTGCACTAGAGTACATCAGT 59.303 47.826 0.00 0.00 36.19 3.41
6244 9583 3.024547 TGGGACTGCACTAGAGTACATC 58.975 50.000 0.00 0.00 0.00 3.06
6252 9591 3.409026 AAAAGAGTGGGACTGCACTAG 57.591 47.619 0.00 0.00 0.00 2.57
6260 9599 6.317893 TGAGTCAAAACTAAAAAGAGTGGGAC 59.682 38.462 0.00 0.00 35.28 4.46
6285 9638 6.605995 GCCCTAATTAGAACTTTACCCAACAT 59.394 38.462 14.28 0.00 0.00 2.71
6293 9646 7.174107 AGTGTACGCCCTAATTAGAACTTTA 57.826 36.000 14.28 0.00 0.00 1.85
6310 9663 7.378461 ACATTTTCATTTAGTGCAAAGTGTACG 59.622 33.333 0.00 0.00 38.05 3.67
6311 9664 8.574196 ACATTTTCATTTAGTGCAAAGTGTAC 57.426 30.769 0.00 0.00 32.12 2.90
6316 9669 9.424659 GTTTTGACATTTTCATTTAGTGCAAAG 57.575 29.630 0.00 0.00 32.84 2.77
6336 9689 8.877864 AATACTATTGAACCATGGAGTTTTGA 57.122 30.769 21.47 0.00 0.00 2.69
6337 9690 9.927668 AAAATACTATTGAACCATGGAGTTTTG 57.072 29.630 21.47 5.31 0.00 2.44
6342 9695 7.645058 ACCAAAATACTATTGAACCATGGAG 57.355 36.000 21.47 6.53 0.00 3.86
6352 9705 5.008316 GGCGGGAAGTACCAAAATACTATTG 59.992 44.000 0.00 0.00 41.20 1.90
6390 9745 8.865090 TCTCCAAAGCAAAAGAAATTATACCAA 58.135 29.630 0.00 0.00 0.00 3.67
6490 9845 5.620206 TCTAACAGGAGCATGTTTGAGAAA 58.380 37.500 5.82 0.00 40.47 2.52
6526 9881 6.489022 GGGATAAATACAAAGGGGTACATGAC 59.511 42.308 0.00 0.00 0.00 3.06
6527 9882 6.607019 GGGATAAATACAAAGGGGTACATGA 58.393 40.000 0.00 0.00 0.00 3.07
6528 9883 5.472137 CGGGATAAATACAAAGGGGTACATG 59.528 44.000 0.00 0.00 0.00 3.21
6529 9884 5.133153 ACGGGATAAATACAAAGGGGTACAT 59.867 40.000 0.00 0.00 0.00 2.29
6530 9885 4.474287 ACGGGATAAATACAAAGGGGTACA 59.526 41.667 0.00 0.00 0.00 2.90
6531 9886 5.039920 ACGGGATAAATACAAAGGGGTAC 57.960 43.478 0.00 0.00 0.00 3.34
6532 9887 5.713760 AACGGGATAAATACAAAGGGGTA 57.286 39.130 0.00 0.00 0.00 3.69
6533 9888 4.596354 AACGGGATAAATACAAAGGGGT 57.404 40.909 0.00 0.00 0.00 4.95
6534 9889 9.962809 TTATATAACGGGATAAATACAAAGGGG 57.037 33.333 0.00 0.00 0.00 4.79
6543 9898 9.955102 GGAAACCTCTTATATAACGGGATAAAT 57.045 33.333 13.08 0.00 0.00 1.40
6544 9899 9.162733 AGGAAACCTCTTATATAACGGGATAAA 57.837 33.333 13.08 0.00 0.00 1.40
6545 9900 8.731591 AGGAAACCTCTTATATAACGGGATAA 57.268 34.615 13.08 0.00 0.00 1.75
6546 9901 9.247861 GTAGGAAACCTCTTATATAACGGGATA 57.752 37.037 13.08 0.00 34.61 2.59
6547 9902 7.731688 TGTAGGAAACCTCTTATATAACGGGAT 59.268 37.037 13.08 2.47 34.61 3.85
6548 9903 7.068702 TGTAGGAAACCTCTTATATAACGGGA 58.931 38.462 13.08 0.93 34.61 5.14
6549 9904 7.294017 TGTAGGAAACCTCTTATATAACGGG 57.706 40.000 9.67 8.44 34.61 5.28
6556 9911 9.442062 TGGAACATATGTAGGAAACCTCTTATA 57.558 33.333 9.21 0.00 34.61 0.98
6557 9912 8.211629 GTGGAACATATGTAGGAAACCTCTTAT 58.788 37.037 9.21 0.00 44.52 1.73
6558 9913 7.181305 TGTGGAACATATGTAGGAAACCTCTTA 59.819 37.037 9.21 0.00 45.67 2.10
6559 9914 6.012858 TGTGGAACATATGTAGGAAACCTCTT 60.013 38.462 9.21 0.00 45.67 2.85
6560 9915 5.487488 TGTGGAACATATGTAGGAAACCTCT 59.513 40.000 9.21 0.00 45.67 3.69
6561 9916 5.741011 TGTGGAACATATGTAGGAAACCTC 58.259 41.667 9.21 0.00 45.67 3.85
6562 9917 5.772393 TGTGGAACATATGTAGGAAACCT 57.228 39.130 9.21 0.00 45.67 3.50
6579 9934 8.899771 CGATATATATACATGTACAGGTGTGGA 58.100 37.037 22.69 9.13 0.00 4.02
6580 9935 8.135529 CCGATATATATACATGTACAGGTGTGG 58.864 40.741 22.69 8.15 0.00 4.17
6581 9936 7.648112 GCCGATATATATACATGTACAGGTGTG 59.352 40.741 22.69 8.01 0.00 3.82
6582 9937 7.201884 GGCCGATATATATACATGTACAGGTGT 60.202 40.741 22.69 18.40 0.00 4.16
6583 9938 7.014326 AGGCCGATATATATACATGTACAGGTG 59.986 40.741 22.69 9.15 0.00 4.00
6584 9939 7.067421 AGGCCGATATATATACATGTACAGGT 58.933 38.462 18.23 18.23 0.00 4.00
6585 9940 7.526142 AGGCCGATATATATACATGTACAGG 57.474 40.000 7.96 5.87 0.00 4.00
6587 9942 9.020731 CCATAGGCCGATATATATACATGTACA 57.979 37.037 7.96 0.00 0.00 2.90
6588 9943 7.974501 GCCATAGGCCGATATATATACATGTAC 59.025 40.741 7.96 0.00 44.06 2.90
6589 9944 8.063200 GCCATAGGCCGATATATATACATGTA 57.937 38.462 8.27 8.27 44.06 2.29
6590 9945 6.936279 GCCATAGGCCGATATATATACATGT 58.064 40.000 2.69 2.69 44.06 3.21
6607 9962 2.644299 TGTATTCCCATGAGGCCATAGG 59.356 50.000 5.01 0.21 33.55 2.57
6608 9963 4.202503 ACTTGTATTCCCATGAGGCCATAG 60.203 45.833 5.01 0.00 34.51 2.23
6609 9964 3.721575 ACTTGTATTCCCATGAGGCCATA 59.278 43.478 5.01 0.00 34.51 2.74
6610 9965 2.515429 ACTTGTATTCCCATGAGGCCAT 59.485 45.455 5.01 0.00 34.51 4.40
6611 9966 1.922447 ACTTGTATTCCCATGAGGCCA 59.078 47.619 5.01 0.00 34.51 5.36
6612 9967 2.689983 CAACTTGTATTCCCATGAGGCC 59.310 50.000 0.00 0.00 34.51 5.19
6613 9968 2.099756 GCAACTTGTATTCCCATGAGGC 59.900 50.000 0.00 0.00 34.51 4.70
6614 9969 3.624777 AGCAACTTGTATTCCCATGAGG 58.375 45.455 0.00 0.00 0.00 3.86
6615 9970 6.949352 ATAAGCAACTTGTATTCCCATGAG 57.051 37.500 0.00 0.00 0.00 2.90
6616 9971 6.321181 GGAATAAGCAACTTGTATTCCCATGA 59.679 38.462 14.79 0.00 43.89 3.07
6617 9972 6.507023 GGAATAAGCAACTTGTATTCCCATG 58.493 40.000 14.79 0.00 43.89 3.66
6618 9973 6.715347 GGAATAAGCAACTTGTATTCCCAT 57.285 37.500 14.79 0.00 43.89 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.