Multiple sequence alignment - TraesCS7D01G022400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G022400 chr7D 100.000 6471 0 0 1 6471 10502784 10509254 0.000000e+00 11950.0
1 TraesCS7D01G022400 chr7D 83.299 2880 401 41 1399 4252 8350340 8353165 0.000000e+00 2580.0
2 TraesCS7D01G022400 chr7D 85.897 2347 293 15 2403 4730 9307311 9304984 0.000000e+00 2466.0
3 TraesCS7D01G022400 chr7D 87.382 951 107 7 1367 2307 9308327 9307380 0.000000e+00 1079.0
4 TraesCS7D01G022400 chr7D 77.005 848 140 28 3411 4250 3823563 3824363 9.960000e-118 435.0
5 TraesCS7D01G022400 chr7D 86.638 232 31 0 4922 5153 9304857 9304626 2.310000e-64 257.0
6 TraesCS7D01G022400 chr4A 95.957 5466 173 16 650 6098 728506194 728511628 0.000000e+00 8826.0
7 TraesCS7D01G022400 chr4A 82.528 2793 409 33 1481 4252 731403819 731401085 0.000000e+00 2381.0
8 TraesCS7D01G022400 chr4A 83.549 2085 310 23 2408 4486 729631852 729629795 0.000000e+00 1919.0
9 TraesCS7D01G022400 chr4A 90.943 1358 81 20 4743 6093 729288441 729287119 0.000000e+00 1788.0
10 TraesCS7D01G022400 chr4A 94.461 668 16 8 1 667 728505363 728506010 0.000000e+00 1009.0
11 TraesCS7D01G022400 chr4A 88.874 737 81 1 3099 3835 728535936 728536671 0.000000e+00 905.0
12 TraesCS7D01G022400 chr4A 79.721 1218 201 24 2418 3627 741815596 741814417 0.000000e+00 839.0
13 TraesCS7D01G022400 chr4A 83.704 405 63 3 3915 4318 728536912 728537314 4.740000e-101 379.0
14 TraesCS7D01G022400 chr4A 78.882 161 23 9 6076 6231 309074692 309074538 1.480000e-16 99.0
15 TraesCS7D01G022400 chr4A 86.076 79 11 0 4922 5000 728551052 728551130 1.160000e-12 86.1
16 TraesCS7D01G022400 chr2D 84.026 2886 376 37 1855 4706 603140484 603137650 0.000000e+00 2697.0
17 TraesCS7D01G022400 chr2D 89.908 327 33 0 4927 5253 500362686 500363012 7.760000e-114 422.0
18 TraesCS7D01G022400 chr2D 86.957 161 21 0 1481 1641 603140879 603140719 1.430000e-41 182.0
19 TraesCS7D01G022400 chr7A 83.085 2891 398 53 1399 4252 8784778 8787614 0.000000e+00 2545.0
20 TraesCS7D01G022400 chr7A 85.475 1432 188 9 2411 3838 9005324 9003909 0.000000e+00 1474.0
21 TraesCS7D01G022400 chr7A 78.079 1843 327 45 2417 4252 3426016 3424244 0.000000e+00 1094.0
22 TraesCS7D01G022400 chr7A 76.952 1831 330 47 2417 4242 13237180 13238923 0.000000e+00 959.0
23 TraesCS7D01G022400 chr7A 84.185 1018 115 23 1364 2341 9006402 9005391 0.000000e+00 946.0
24 TraesCS7D01G022400 chr7A 74.856 2080 387 76 2428 4477 2078210 2080183 0.000000e+00 819.0
25 TraesCS7D01G022400 chr7A 77.043 257 50 4 1399 1652 13236297 13236547 8.750000e-29 139.0
26 TraesCS7D01G022400 chr7A 78.022 182 26 10 6237 6417 662411810 662411642 1.150000e-17 102.0
27 TraesCS7D01G022400 chr2B 89.908 327 33 0 4927 5253 588067422 588067748 7.760000e-114 422.0
28 TraesCS7D01G022400 chr2A 89.602 327 34 0 4927 5253 645311426 645311752 3.610000e-112 416.0
29 TraesCS7D01G022400 chr6D 86.239 327 45 0 4927 5253 342472964 342472638 7.980000e-94 355.0
30 TraesCS7D01G022400 chr6D 88.732 71 7 1 6352 6422 2187828 2187759 1.160000e-12 86.1
31 TraesCS7D01G022400 chr6A 86.239 327 45 0 4927 5253 482620186 482619860 7.980000e-94 355.0
32 TraesCS7D01G022400 chr6B 85.933 327 46 0 4927 5253 516880219 516879893 3.710000e-92 350.0
33 TraesCS7D01G022400 chr1D 84.000 350 53 1 3885 4234 456285840 456285494 3.740000e-87 333.0
34 TraesCS7D01G022400 chr1D 81.545 233 40 1 1982 2214 456287645 456287416 8.570000e-44 189.0
35 TraesCS7D01G022400 chr1D 91.304 69 5 1 6349 6417 250956963 250956896 6.910000e-15 93.5
36 TraesCS7D01G022400 chrUn 83.439 314 52 0 4927 5240 365429948 365429635 6.350000e-75 292.0
37 TraesCS7D01G022400 chr1B 78.378 185 25 11 6230 6408 15718649 15718474 8.870000e-19 106.0
38 TraesCS7D01G022400 chr3D 84.615 104 12 2 6076 6175 539485101 539485204 4.130000e-17 100.0
39 TraesCS7D01G022400 chr3D 91.304 69 5 1 6349 6417 547459206 547459273 6.910000e-15 93.5
40 TraesCS7D01G022400 chr4D 84.211 95 11 2 6076 6167 175800200 175800293 8.940000e-14 89.8
41 TraesCS7D01G022400 chr4D 100.000 29 0 0 6389 6417 450322806 450322778 3.000000e-03 54.7
42 TraesCS7D01G022400 chr4D 90.244 41 2 1 6349 6387 450322804 450322764 1.200000e-02 52.8
43 TraesCS7D01G022400 chr7B 85.294 68 9 1 6349 6416 45268402 45268336 1.160000e-07 69.4
44 TraesCS7D01G022400 chr7B 100.000 29 0 0 6389 6417 563729982 563730010 3.000000e-03 54.7
45 TraesCS7D01G022400 chr7B 100.000 28 0 0 6349 6376 563729984 563730011 1.200000e-02 52.8
46 TraesCS7D01G022400 chr3A 97.297 37 1 0 2371 2407 677161948 677161984 5.420000e-06 63.9
47 TraesCS7D01G022400 chr5B 100.000 29 0 0 6382 6410 699940999 699940971 3.000000e-03 54.7
48 TraesCS7D01G022400 chr4B 86.000 50 5 1 6349 6396 65887761 65887712 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G022400 chr7D 10502784 10509254 6470 False 11950.000000 11950 100.0000 1 6471 1 chr7D.!!$F3 6470
1 TraesCS7D01G022400 chr7D 8350340 8353165 2825 False 2580.000000 2580 83.2990 1399 4252 1 chr7D.!!$F2 2853
2 TraesCS7D01G022400 chr7D 9304626 9308327 3701 True 1267.333333 2466 86.6390 1367 5153 3 chr7D.!!$R1 3786
3 TraesCS7D01G022400 chr7D 3823563 3824363 800 False 435.000000 435 77.0050 3411 4250 1 chr7D.!!$F1 839
4 TraesCS7D01G022400 chr4A 728505363 728511628 6265 False 4917.500000 8826 95.2090 1 6098 2 chr4A.!!$F2 6097
5 TraesCS7D01G022400 chr4A 731401085 731403819 2734 True 2381.000000 2381 82.5280 1481 4252 1 chr4A.!!$R4 2771
6 TraesCS7D01G022400 chr4A 729629795 729631852 2057 True 1919.000000 1919 83.5490 2408 4486 1 chr4A.!!$R3 2078
7 TraesCS7D01G022400 chr4A 729287119 729288441 1322 True 1788.000000 1788 90.9430 4743 6093 1 chr4A.!!$R2 1350
8 TraesCS7D01G022400 chr4A 741814417 741815596 1179 True 839.000000 839 79.7210 2418 3627 1 chr4A.!!$R5 1209
9 TraesCS7D01G022400 chr4A 728535936 728537314 1378 False 642.000000 905 86.2890 3099 4318 2 chr4A.!!$F3 1219
10 TraesCS7D01G022400 chr2D 603137650 603140879 3229 True 1439.500000 2697 85.4915 1481 4706 2 chr2D.!!$R1 3225
11 TraesCS7D01G022400 chr7A 8784778 8787614 2836 False 2545.000000 2545 83.0850 1399 4252 1 chr7A.!!$F2 2853
12 TraesCS7D01G022400 chr7A 9003909 9006402 2493 True 1210.000000 1474 84.8300 1364 3838 2 chr7A.!!$R3 2474
13 TraesCS7D01G022400 chr7A 3424244 3426016 1772 True 1094.000000 1094 78.0790 2417 4252 1 chr7A.!!$R1 1835
14 TraesCS7D01G022400 chr7A 2078210 2080183 1973 False 819.000000 819 74.8560 2428 4477 1 chr7A.!!$F1 2049
15 TraesCS7D01G022400 chr7A 13236297 13238923 2626 False 549.000000 959 76.9975 1399 4242 2 chr7A.!!$F3 2843
16 TraesCS7D01G022400 chr1D 456285494 456287645 2151 True 261.000000 333 82.7725 1982 4234 2 chr1D.!!$R2 2252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 221 0.602562 TGCTTGCTTTTGGAATCCGG 59.397 50.0 0.00 0.0 0.00 5.14 F
380 381 0.980231 AGAGAGAGGGGGCACATGAC 60.980 60.0 0.00 0.0 0.00 3.06 F
1609 1824 0.820482 TGGATGAATGAGGCGCATGG 60.820 55.0 10.83 0.0 37.28 3.66 F
2615 2968 1.475403 AACCTCTCGACGGTGATCAT 58.525 50.0 0.00 0.0 34.33 2.45 F
4283 4863 0.670546 CTTCAGGCCAACGACGACAT 60.671 55.0 5.01 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1046 1249 0.473755 TTTCTGCTTGCTCAGGTCCA 59.526 50.000 0.00 0.00 34.91 4.02 R
1809 2099 2.025605 TGGGCTTACTAGGAAGACGAGA 60.026 50.000 19.46 0.00 35.04 4.04 R
3388 3750 1.228154 GGGTCAGGGTCACCACAAC 60.228 63.158 0.00 0.00 40.13 3.32 R
4386 4966 0.467384 ATGAAGGTCCTCGAGGCATG 59.533 55.000 27.39 3.01 34.44 4.06 R
6273 6919 0.173481 TAGGCTAGCTCGCTTGTGTG 59.827 55.000 15.72 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.938596 GGTAAGTAACAAGGTGGTATCACTTT 59.061 38.462 6.00 1.11 42.77 2.66
103 104 8.079203 TCTAAACAAACATCGCATTAAACATGT 58.921 29.630 0.00 0.00 0.00 3.21
115 116 6.344624 CGCATTAAACATGTACACAAACACAC 60.345 38.462 0.00 0.00 30.75 3.82
117 118 7.009631 GCATTAAACATGTACACAAACACACAA 59.990 33.333 0.00 0.00 30.75 3.33
207 208 1.135286 GCCATGTTAGGTTCTGCTTGC 60.135 52.381 0.00 0.00 0.00 4.01
220 221 0.602562 TGCTTGCTTTTGGAATCCGG 59.397 50.000 0.00 0.00 0.00 5.14
269 270 6.769822 CAGGAACTAGGTGCATTGATAAGATT 59.230 38.462 0.82 0.00 36.02 2.40
307 308 5.181690 TCAATCTTCCGGTTTTTGAAGTG 57.818 39.130 0.00 0.00 39.19 3.16
352 353 6.755542 AAAAATATAGAGAGGGAGTGAGGG 57.244 41.667 0.00 0.00 0.00 4.30
353 354 5.688220 AAATATAGAGAGGGAGTGAGGGA 57.312 43.478 0.00 0.00 0.00 4.20
354 355 4.946160 ATATAGAGAGGGAGTGAGGGAG 57.054 50.000 0.00 0.00 0.00 4.30
355 356 1.227249 TAGAGAGGGAGTGAGGGAGG 58.773 60.000 0.00 0.00 0.00 4.30
356 357 1.075600 GAGAGGGAGTGAGGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
357 358 2.041405 GAGGGAGTGAGGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
358 359 3.700350 AGGGAGTGAGGGAGGGGG 61.700 72.222 0.00 0.00 0.00 5.40
359 360 3.695825 GGGAGTGAGGGAGGGGGA 61.696 72.222 0.00 0.00 0.00 4.81
360 361 2.041405 GGAGTGAGGGAGGGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
361 362 2.637640 GGAGTGAGGGAGGGGGAGA 61.638 68.421 0.00 0.00 0.00 3.71
362 363 1.075600 GAGTGAGGGAGGGGGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
363 364 1.547755 AGTGAGGGAGGGGGAGAGA 60.548 63.158 0.00 0.00 0.00 3.10
364 365 1.075600 GTGAGGGAGGGGGAGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
365 366 1.230650 TGAGGGAGGGGGAGAGAGA 60.231 63.158 0.00 0.00 0.00 3.10
366 367 1.292941 TGAGGGAGGGGGAGAGAGAG 61.293 65.000 0.00 0.00 0.00 3.20
367 368 0.996762 GAGGGAGGGGGAGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
380 381 0.980231 AGAGAGAGGGGGCACATGAC 60.980 60.000 0.00 0.00 0.00 3.06
442 443 8.726870 TGTATTTTAATTAGGTGTCAGTAGCC 57.273 34.615 0.00 0.00 0.00 3.93
612 613 6.730960 TTTTCGTATAGGTTTGGTTAGCTG 57.269 37.500 0.00 0.00 0.00 4.24
616 617 4.565564 CGTATAGGTTTGGTTAGCTGTGTC 59.434 45.833 0.00 0.00 0.00 3.67
647 648 6.198650 CATTCACATGCAGGATTTAGAACA 57.801 37.500 4.84 0.00 0.00 3.18
708 911 8.830201 AGTACATAACTACGTAGTCCTATCAG 57.170 38.462 27.51 13.75 43.93 2.90
767 970 9.667107 TTGGAATTGTCGATCTAAAAAGATACT 57.333 29.630 0.00 0.00 0.00 2.12
992 1195 1.215647 CGGACCTGAGGAAACGGAG 59.784 63.158 4.99 0.00 0.00 4.63
1046 1249 1.219980 TGAGGATGAGGATGAGGAGCT 59.780 52.381 0.00 0.00 0.00 4.09
1152 1355 2.148558 CTCTATCTCCTTCCGGCCGC 62.149 65.000 22.85 0.00 0.00 6.53
1314 1517 4.865365 GTCTGGTAAGTGCACTTGATCTAC 59.135 45.833 36.50 26.49 37.40 2.59
1315 1518 4.081642 TCTGGTAAGTGCACTTGATCTACC 60.082 45.833 36.50 32.63 37.40 3.18
1609 1824 0.820482 TGGATGAATGAGGCGCATGG 60.820 55.000 10.83 0.00 37.28 3.66
1709 1957 2.703536 GGGGAGGAGGAAGAAGAAGATC 59.296 54.545 0.00 0.00 0.00 2.75
1770 2045 2.038164 TGCAGAGCTCAAGTGTCAGAAT 59.962 45.455 17.77 0.00 0.00 2.40
1859 2158 6.918626 TGCAAAAACAATATCGGAATTCAGA 58.081 32.000 10.79 10.79 0.00 3.27
2177 2497 6.477053 TTCATTCAAGTGTCCAAAAATCCA 57.523 33.333 0.00 0.00 0.00 3.41
2180 2500 5.514274 TTCAAGTGTCCAAAAATCCAGAC 57.486 39.130 0.00 0.00 0.00 3.51
2314 2640 6.184068 TGCAAGATAAAAGGTACTATTGGCA 58.816 36.000 0.00 0.00 38.49 4.92
2615 2968 1.475403 AACCTCTCGACGGTGATCAT 58.525 50.000 0.00 0.00 34.33 2.45
2929 3285 6.497640 TGTATCTGCATATCTATCCAGAGGT 58.502 40.000 0.00 0.00 37.70 3.85
3038 3394 2.322355 TGATAGAGAAAGCTGCAGGC 57.678 50.000 17.12 7.98 42.19 4.85
3388 3750 5.070001 TCTGGACCTTCAACTATTTGGTTG 58.930 41.667 0.76 0.76 45.42 3.77
3446 3832 3.117491 TCAGAACTGTTTCAGCTGAGG 57.883 47.619 17.43 10.90 34.37 3.86
3680 4087 1.593296 GGAGCCTTGGCAAGCTGAAG 61.593 60.000 21.77 8.79 40.11 3.02
3706 4113 4.040095 CCTGCAGGATCTTCATCTCACATA 59.960 45.833 29.88 0.00 37.39 2.29
3958 4538 5.298777 GCTGCATATTCTCACAAATTCCTCT 59.701 40.000 0.00 0.00 0.00 3.69
4020 4600 4.529897 TCCAGTGATGGAAATGAAGATGG 58.470 43.478 0.00 0.00 34.56 3.51
4283 4863 0.670546 CTTCAGGCCAACGACGACAT 60.671 55.000 5.01 0.00 0.00 3.06
4289 4869 1.127951 GGCCAACGACGACATAAAGTG 59.872 52.381 0.00 0.00 0.00 3.16
4361 4941 7.766278 GGACTTAAAGAGATCTCTGCACAATTA 59.234 37.037 25.78 15.59 40.36 1.40
4386 4966 3.194062 GGTGCAGTTTCTGATCTAGAGC 58.806 50.000 0.00 0.00 36.61 4.09
4539 5134 6.265422 TGAATACGCCAAGAGATTAGAGATGA 59.735 38.462 0.00 0.00 0.00 2.92
4600 5202 6.153942 AGGAAATAAGCCCTCCTTTACTTT 57.846 37.500 0.00 0.00 36.06 2.66
4699 5306 0.456995 CGTCGCTGGAGTCTTCTTCC 60.457 60.000 0.00 0.00 0.00 3.46
4716 5323 0.749049 TCCAGTCTGGATGATCTGCG 59.251 55.000 18.15 0.00 42.67 5.18
4721 5328 2.064762 GTCTGGATGATCTGCGTATGC 58.935 52.381 0.00 0.00 43.20 3.14
4729 5336 0.826715 ATCTGCGTATGCCTGTGTCT 59.173 50.000 4.05 0.00 41.78 3.41
4838 5445 6.793492 ACTTGTGCTGATAGAGAAGTTTTC 57.207 37.500 0.00 0.00 0.00 2.29
4873 5481 4.999950 ACTGCACCAAAGAAGATGTCTTAG 59.000 41.667 0.00 0.00 46.36 2.18
4948 5574 2.761559 CACATGTTCGACAAGGTGGTA 58.238 47.619 0.00 0.00 35.30 3.25
5200 5826 2.434774 GTTTCCTTCTGCCGGGGT 59.565 61.111 2.18 0.00 0.00 4.95
5433 6059 3.234730 ATCGCCGTCATCCTCCCC 61.235 66.667 0.00 0.00 0.00 4.81
5465 6091 2.840640 TTCCTCCTTGGATCTCGGTA 57.159 50.000 0.00 0.00 45.68 4.02
5575 6201 5.299279 ACCTTTTGTGGTTCTGTCTGTTATG 59.701 40.000 0.00 0.00 36.89 1.90
5583 6213 5.700832 TGGTTCTGTCTGTTATGACATTGAC 59.299 40.000 0.00 3.79 44.66 3.18
5680 6310 9.566432 AGAGAGAATGAAATTAGGCGAATTAAT 57.434 29.630 6.00 1.46 36.07 1.40
5710 6340 5.870978 CCTTCATGGATTTGTTTGGATTCAC 59.129 40.000 0.00 0.00 38.35 3.18
5720 6350 9.264719 GATTTGTTTGGATTCACTTGAAATTCT 57.735 29.630 0.00 0.00 37.61 2.40
5766 6405 1.000163 GCAGTAGCTGGCTCGCTATTA 60.000 52.381 11.20 0.00 43.68 0.98
5921 6564 4.717233 TTTCTGCAGAAACTTGAGCAAA 57.283 36.364 32.86 11.46 38.94 3.68
5966 6609 1.131638 ACATCCCAGACATGGCGTAT 58.868 50.000 0.00 0.00 46.19 3.06
5967 6610 1.490490 ACATCCCAGACATGGCGTATT 59.510 47.619 0.00 0.00 46.19 1.89
5968 6611 2.146342 CATCCCAGACATGGCGTATTC 58.854 52.381 0.00 0.00 46.19 1.75
5969 6612 1.199615 TCCCAGACATGGCGTATTCA 58.800 50.000 0.00 0.00 46.19 2.57
5970 6613 1.768275 TCCCAGACATGGCGTATTCAT 59.232 47.619 0.00 0.00 46.19 2.57
6006 6652 3.350833 CAAAGTCAAATGGAGGCTAGCT 58.649 45.455 15.72 0.00 0.00 3.32
6012 6658 3.118261 TCAAATGGAGGCTAGCTAAGGTG 60.118 47.826 15.72 5.02 0.00 4.00
6029 6675 1.305465 TGCTAGCAGGTTACGGGGA 60.305 57.895 14.93 0.00 0.00 4.81
6030 6676 1.327690 TGCTAGCAGGTTACGGGGAG 61.328 60.000 14.93 0.00 0.00 4.30
6052 6698 3.735746 GCTGTTTCTGTTTATTGTGTGGC 59.264 43.478 0.00 0.00 0.00 5.01
6089 6735 1.278985 TCGTAGTACTCCCTCCGTTCA 59.721 52.381 0.00 0.00 0.00 3.18
6094 6740 5.702670 CGTAGTACTCCCTCCGTTCATAATA 59.297 44.000 0.00 0.00 0.00 0.98
6096 6742 6.651975 AGTACTCCCTCCGTTCATAATAAG 57.348 41.667 0.00 0.00 0.00 1.73
6097 6743 6.134754 AGTACTCCCTCCGTTCATAATAAGT 58.865 40.000 0.00 0.00 0.00 2.24
6099 6745 5.671493 ACTCCCTCCGTTCATAATAAGTTG 58.329 41.667 0.00 0.00 0.00 3.16
6100 6746 5.189145 ACTCCCTCCGTTCATAATAAGTTGT 59.811 40.000 0.00 0.00 0.00 3.32
6101 6747 6.057321 TCCCTCCGTTCATAATAAGTTGTT 57.943 37.500 0.00 0.00 0.00 2.83
6102 6748 6.478129 TCCCTCCGTTCATAATAAGTTGTTT 58.522 36.000 0.00 0.00 0.00 2.83
6103 6749 6.943718 TCCCTCCGTTCATAATAAGTTGTTTT 59.056 34.615 0.00 0.00 0.00 2.43
6104 6750 7.027161 CCCTCCGTTCATAATAAGTTGTTTTG 58.973 38.462 0.00 0.00 0.00 2.44
6105 6751 7.027161 CCTCCGTTCATAATAAGTTGTTTTGG 58.973 38.462 3.65 0.00 0.00 3.28
6106 6752 6.383415 TCCGTTCATAATAAGTTGTTTTGGC 58.617 36.000 3.65 0.00 0.00 4.52
6107 6753 6.207810 TCCGTTCATAATAAGTTGTTTTGGCT 59.792 34.615 3.65 0.00 0.00 4.75
6108 6754 6.866248 CCGTTCATAATAAGTTGTTTTGGCTT 59.134 34.615 3.65 0.00 0.00 4.35
6109 6755 7.383843 CCGTTCATAATAAGTTGTTTTGGCTTT 59.616 33.333 3.65 0.00 0.00 3.51
6110 6756 8.760569 CGTTCATAATAAGTTGTTTTGGCTTTT 58.239 29.630 3.65 0.00 0.00 2.27
6113 6759 9.267084 TCATAATAAGTTGTTTTGGCTTTTTCC 57.733 29.630 3.65 0.00 0.00 3.13
6114 6760 6.597262 AATAAGTTGTTTTGGCTTTTTCCG 57.403 33.333 0.00 0.00 0.00 4.30
6115 6761 3.878160 AGTTGTTTTGGCTTTTTCCGA 57.122 38.095 0.00 0.00 0.00 4.55
6116 6762 3.517602 AGTTGTTTTGGCTTTTTCCGAC 58.482 40.909 0.00 0.00 0.00 4.79
6117 6763 3.056465 AGTTGTTTTGGCTTTTTCCGACA 60.056 39.130 0.00 0.00 0.00 4.35
6118 6764 3.594603 TGTTTTGGCTTTTTCCGACAA 57.405 38.095 0.00 0.00 0.00 3.18
6119 6765 3.516615 TGTTTTGGCTTTTTCCGACAAG 58.483 40.909 0.00 0.00 29.81 3.16
6120 6766 2.217429 TTTGGCTTTTTCCGACAAGC 57.783 45.000 3.66 3.66 44.06 4.01
6121 6767 1.398692 TTGGCTTTTTCCGACAAGCT 58.601 45.000 10.14 0.00 44.20 3.74
6122 6768 0.951558 TGGCTTTTTCCGACAAGCTC 59.048 50.000 10.14 3.62 44.20 4.09
6123 6769 0.241213 GGCTTTTTCCGACAAGCTCC 59.759 55.000 10.14 0.00 44.20 4.70
6124 6770 0.951558 GCTTTTTCCGACAAGCTCCA 59.048 50.000 0.00 0.00 41.93 3.86
6125 6771 1.336755 GCTTTTTCCGACAAGCTCCAA 59.663 47.619 0.00 0.00 41.93 3.53
6126 6772 2.223711 GCTTTTTCCGACAAGCTCCAAA 60.224 45.455 0.00 0.00 41.93 3.28
6127 6773 3.736740 GCTTTTTCCGACAAGCTCCAAAA 60.737 43.478 0.00 0.00 41.93 2.44
6128 6774 4.429108 CTTTTTCCGACAAGCTCCAAAAA 58.571 39.130 0.00 0.00 0.00 1.94
6129 6775 3.430333 TTTCCGACAAGCTCCAAAAAC 57.570 42.857 0.00 0.00 0.00 2.43
6130 6776 1.314730 TCCGACAAGCTCCAAAAACC 58.685 50.000 0.00 0.00 0.00 3.27
6131 6777 1.028905 CCGACAAGCTCCAAAAACCA 58.971 50.000 0.00 0.00 0.00 3.67
6132 6778 1.001378 CCGACAAGCTCCAAAAACCAG 60.001 52.381 0.00 0.00 0.00 4.00
6133 6779 1.600413 CGACAAGCTCCAAAAACCAGC 60.600 52.381 0.00 0.00 0.00 4.85
6134 6780 1.408702 GACAAGCTCCAAAAACCAGCA 59.591 47.619 0.00 0.00 35.46 4.41
6135 6781 1.830477 ACAAGCTCCAAAAACCAGCAA 59.170 42.857 0.00 0.00 35.46 3.91
6136 6782 2.235898 ACAAGCTCCAAAAACCAGCAAA 59.764 40.909 0.00 0.00 35.46 3.68
6137 6783 3.269178 CAAGCTCCAAAAACCAGCAAAA 58.731 40.909 0.00 0.00 35.46 2.44
6138 6784 3.843893 AGCTCCAAAAACCAGCAAAAT 57.156 38.095 0.00 0.00 35.46 1.82
6139 6785 3.469739 AGCTCCAAAAACCAGCAAAATG 58.530 40.909 0.00 0.00 35.46 2.32
6140 6786 3.134442 AGCTCCAAAAACCAGCAAAATGA 59.866 39.130 0.00 0.00 35.46 2.57
6141 6787 3.248363 GCTCCAAAAACCAGCAAAATGAC 59.752 43.478 0.00 0.00 33.06 3.06
6142 6788 4.440880 CTCCAAAAACCAGCAAAATGACA 58.559 39.130 0.00 0.00 0.00 3.58
6143 6789 5.033589 TCCAAAAACCAGCAAAATGACAT 57.966 34.783 0.00 0.00 0.00 3.06
6144 6790 4.815308 TCCAAAAACCAGCAAAATGACATG 59.185 37.500 0.00 0.00 0.00 3.21
6145 6791 4.575645 CCAAAAACCAGCAAAATGACATGT 59.424 37.500 0.00 0.00 0.00 3.21
6146 6792 5.066246 CCAAAAACCAGCAAAATGACATGTT 59.934 36.000 0.00 0.00 0.00 2.71
6147 6793 6.404513 CCAAAAACCAGCAAAATGACATGTTT 60.405 34.615 0.00 0.00 0.00 2.83
6148 6794 7.201679 CCAAAAACCAGCAAAATGACATGTTTA 60.202 33.333 0.00 0.00 0.00 2.01
6149 6795 8.344098 CAAAAACCAGCAAAATGACATGTTTAT 58.656 29.630 0.00 0.00 0.00 1.40
6150 6796 7.656707 AAACCAGCAAAATGACATGTTTATC 57.343 32.000 0.00 0.00 0.00 1.75
6151 6797 5.723295 ACCAGCAAAATGACATGTTTATCC 58.277 37.500 0.00 0.00 0.00 2.59
6152 6798 5.111293 CCAGCAAAATGACATGTTTATCCC 58.889 41.667 0.00 0.00 0.00 3.85
6153 6799 5.111293 CAGCAAAATGACATGTTTATCCCC 58.889 41.667 0.00 0.00 0.00 4.81
6154 6800 5.025453 AGCAAAATGACATGTTTATCCCCT 58.975 37.500 0.00 0.00 0.00 4.79
6155 6801 6.096705 CAGCAAAATGACATGTTTATCCCCTA 59.903 38.462 0.00 0.00 0.00 3.53
6156 6802 6.096846 AGCAAAATGACATGTTTATCCCCTAC 59.903 38.462 0.00 0.00 0.00 3.18
6157 6803 6.682861 GCAAAATGACATGTTTATCCCCTACC 60.683 42.308 0.00 0.00 0.00 3.18
6158 6804 4.724279 ATGACATGTTTATCCCCTACCC 57.276 45.455 0.00 0.00 0.00 3.69
6159 6805 3.465832 TGACATGTTTATCCCCTACCCA 58.534 45.455 0.00 0.00 0.00 4.51
6160 6806 3.853181 TGACATGTTTATCCCCTACCCAA 59.147 43.478 0.00 0.00 0.00 4.12
6161 6807 4.292571 TGACATGTTTATCCCCTACCCAAA 59.707 41.667 0.00 0.00 0.00 3.28
6162 6808 5.222358 TGACATGTTTATCCCCTACCCAAAA 60.222 40.000 0.00 0.00 0.00 2.44
6163 6809 5.849140 ACATGTTTATCCCCTACCCAAAAT 58.151 37.500 0.00 0.00 0.00 1.82
6164 6810 6.987557 ACATGTTTATCCCCTACCCAAAATA 58.012 36.000 0.00 0.00 0.00 1.40
6165 6811 6.837048 ACATGTTTATCCCCTACCCAAAATAC 59.163 38.462 0.00 0.00 0.00 1.89
6166 6812 6.404426 TGTTTATCCCCTACCCAAAATACA 57.596 37.500 0.00 0.00 0.00 2.29
6167 6813 6.189133 TGTTTATCCCCTACCCAAAATACAC 58.811 40.000 0.00 0.00 0.00 2.90
6168 6814 6.189133 GTTTATCCCCTACCCAAAATACACA 58.811 40.000 0.00 0.00 0.00 3.72
6169 6815 4.519906 ATCCCCTACCCAAAATACACAG 57.480 45.455 0.00 0.00 0.00 3.66
6170 6816 2.578940 TCCCCTACCCAAAATACACAGG 59.421 50.000 0.00 0.00 0.00 4.00
6171 6817 2.375146 CCCTACCCAAAATACACAGGC 58.625 52.381 0.00 0.00 0.00 4.85
6172 6818 2.291282 CCCTACCCAAAATACACAGGCA 60.291 50.000 0.00 0.00 0.00 4.75
6173 6819 3.426615 CCTACCCAAAATACACAGGCAA 58.573 45.455 0.00 0.00 0.00 4.52
6174 6820 3.829601 CCTACCCAAAATACACAGGCAAA 59.170 43.478 0.00 0.00 0.00 3.68
6175 6821 3.744238 ACCCAAAATACACAGGCAAAC 57.256 42.857 0.00 0.00 0.00 2.93
6176 6822 2.367241 ACCCAAAATACACAGGCAAACC 59.633 45.455 0.00 0.00 0.00 3.27
6177 6823 2.366916 CCCAAAATACACAGGCAAACCA 59.633 45.455 0.00 0.00 39.06 3.67
6178 6824 3.007831 CCCAAAATACACAGGCAAACCAT 59.992 43.478 0.00 0.00 39.06 3.55
6179 6825 4.221703 CCCAAAATACACAGGCAAACCATA 59.778 41.667 0.00 0.00 39.06 2.74
6180 6826 5.167845 CCAAAATACACAGGCAAACCATAC 58.832 41.667 0.00 0.00 39.06 2.39
6181 6827 5.279206 CCAAAATACACAGGCAAACCATACA 60.279 40.000 0.00 0.00 39.06 2.29
6182 6828 5.385509 AAATACACAGGCAAACCATACAC 57.614 39.130 0.00 0.00 39.06 2.90
6183 6829 2.356665 ACACAGGCAAACCATACACA 57.643 45.000 0.00 0.00 39.06 3.72
6184 6830 1.953686 ACACAGGCAAACCATACACAC 59.046 47.619 0.00 0.00 39.06 3.82
6185 6831 2.229792 CACAGGCAAACCATACACACT 58.770 47.619 0.00 0.00 39.06 3.55
6186 6832 2.030893 CACAGGCAAACCATACACACTG 60.031 50.000 0.00 0.00 39.06 3.66
6187 6833 2.158682 ACAGGCAAACCATACACACTGA 60.159 45.455 0.00 0.00 39.06 3.41
6188 6834 2.884012 CAGGCAAACCATACACACTGAA 59.116 45.455 0.00 0.00 39.06 3.02
6189 6835 3.317711 CAGGCAAACCATACACACTGAAA 59.682 43.478 0.00 0.00 39.06 2.69
6190 6836 3.317993 AGGCAAACCATACACACTGAAAC 59.682 43.478 0.00 0.00 39.06 2.78
6191 6837 3.317993 GGCAAACCATACACACTGAAACT 59.682 43.478 0.00 0.00 35.26 2.66
6192 6838 4.290155 GCAAACCATACACACTGAAACTG 58.710 43.478 0.00 0.00 0.00 3.16
6193 6839 4.792704 GCAAACCATACACACTGAAACTGG 60.793 45.833 0.00 0.00 0.00 4.00
6194 6840 4.431416 AACCATACACACTGAAACTGGA 57.569 40.909 0.00 0.00 0.00 3.86
6195 6841 4.431416 ACCATACACACTGAAACTGGAA 57.569 40.909 0.00 0.00 0.00 3.53
6196 6842 4.985538 ACCATACACACTGAAACTGGAAT 58.014 39.130 0.00 0.00 0.00 3.01
6197 6843 6.121776 ACCATACACACTGAAACTGGAATA 57.878 37.500 0.00 0.00 0.00 1.75
6198 6844 6.173339 ACCATACACACTGAAACTGGAATAG 58.827 40.000 0.00 0.00 0.00 1.73
6199 6845 5.586243 CCATACACACTGAAACTGGAATAGG 59.414 44.000 0.00 0.00 0.00 2.57
6200 6846 4.706842 ACACACTGAAACTGGAATAGGT 57.293 40.909 0.00 0.00 0.00 3.08
6201 6847 4.642429 ACACACTGAAACTGGAATAGGTC 58.358 43.478 0.00 0.00 0.00 3.85
6209 6855 3.937447 GGAATAGGTCCCGCCGGG 61.937 72.222 18.41 18.41 46.11 5.73
6222 6868 3.142393 CCGGGGTAGAGAGGCATG 58.858 66.667 0.00 0.00 0.00 4.06
6223 6869 2.511452 CCGGGGTAGAGAGGCATGG 61.511 68.421 0.00 0.00 0.00 3.66
6224 6870 1.762460 CGGGGTAGAGAGGCATGGT 60.762 63.158 0.00 0.00 0.00 3.55
6225 6871 1.832912 GGGGTAGAGAGGCATGGTG 59.167 63.158 0.00 0.00 0.00 4.17
6226 6872 1.700042 GGGGTAGAGAGGCATGGTGG 61.700 65.000 0.00 0.00 0.00 4.61
6227 6873 1.700042 GGGTAGAGAGGCATGGTGGG 61.700 65.000 0.00 0.00 0.00 4.61
6228 6874 1.147153 GTAGAGAGGCATGGTGGGC 59.853 63.158 0.00 0.00 0.00 5.36
6229 6875 2.434843 TAGAGAGGCATGGTGGGCG 61.435 63.158 0.00 0.00 38.57 6.13
6230 6876 4.864334 GAGAGGCATGGTGGGCGG 62.864 72.222 0.00 0.00 38.57 6.13
6232 6878 4.424711 GAGGCATGGTGGGCGGAA 62.425 66.667 0.00 0.00 38.57 4.30
6233 6879 3.936772 GAGGCATGGTGGGCGGAAA 62.937 63.158 0.00 0.00 38.57 3.13
6234 6880 2.759560 GGCATGGTGGGCGGAAAT 60.760 61.111 0.00 0.00 0.00 2.17
6235 6881 2.358372 GGCATGGTGGGCGGAAATT 61.358 57.895 0.00 0.00 0.00 1.82
6236 6882 1.141665 GCATGGTGGGCGGAAATTC 59.858 57.895 0.00 0.00 0.00 2.17
6237 6883 1.815866 CATGGTGGGCGGAAATTCC 59.184 57.895 0.99 0.99 0.00 3.01
6238 6884 0.684153 CATGGTGGGCGGAAATTCCT 60.684 55.000 10.64 0.00 33.30 3.36
6239 6885 0.923358 ATGGTGGGCGGAAATTCCTA 59.077 50.000 10.64 0.00 33.30 2.94
6240 6886 0.923358 TGGTGGGCGGAAATTCCTAT 59.077 50.000 10.64 0.00 33.30 2.57
6241 6887 1.286553 TGGTGGGCGGAAATTCCTATT 59.713 47.619 10.64 0.00 33.30 1.73
6242 6888 2.510382 TGGTGGGCGGAAATTCCTATTA 59.490 45.455 10.64 0.00 33.30 0.98
6243 6889 3.146847 GGTGGGCGGAAATTCCTATTAG 58.853 50.000 10.64 0.00 33.30 1.73
6244 6890 3.181448 GGTGGGCGGAAATTCCTATTAGA 60.181 47.826 10.64 0.00 33.30 2.10
6245 6891 3.813724 GTGGGCGGAAATTCCTATTAGAC 59.186 47.826 10.64 0.00 33.30 2.59
6246 6892 3.714798 TGGGCGGAAATTCCTATTAGACT 59.285 43.478 10.64 0.00 33.30 3.24
6247 6893 4.202326 TGGGCGGAAATTCCTATTAGACTC 60.202 45.833 10.64 0.00 33.30 3.36
6248 6894 4.202326 GGGCGGAAATTCCTATTAGACTCA 60.202 45.833 10.64 0.00 33.30 3.41
6249 6895 5.513267 GGGCGGAAATTCCTATTAGACTCAT 60.513 44.000 10.64 0.00 33.30 2.90
6250 6896 5.998363 GGCGGAAATTCCTATTAGACTCATT 59.002 40.000 10.64 0.00 33.30 2.57
6251 6897 6.147985 GGCGGAAATTCCTATTAGACTCATTC 59.852 42.308 10.64 0.00 33.30 2.67
6252 6898 6.931840 GCGGAAATTCCTATTAGACTCATTCT 59.068 38.462 10.64 0.00 34.52 2.40
6253 6899 7.095439 GCGGAAATTCCTATTAGACTCATTCTG 60.095 40.741 10.64 0.00 32.94 3.02
6254 6900 7.095439 CGGAAATTCCTATTAGACTCATTCTGC 60.095 40.741 10.64 0.00 32.94 4.26
6255 6901 7.095439 GGAAATTCCTATTAGACTCATTCTGCG 60.095 40.741 4.46 0.00 32.59 5.18
6256 6902 5.854010 TTCCTATTAGACTCATTCTGCGT 57.146 39.130 0.00 0.00 35.55 5.24
6257 6903 5.440234 TCCTATTAGACTCATTCTGCGTC 57.560 43.478 0.00 0.00 35.55 5.19
6258 6904 4.887655 TCCTATTAGACTCATTCTGCGTCA 59.112 41.667 0.72 0.00 34.75 4.35
6259 6905 5.359860 TCCTATTAGACTCATTCTGCGTCAA 59.640 40.000 0.72 0.00 34.75 3.18
6260 6906 6.042777 CCTATTAGACTCATTCTGCGTCAAA 58.957 40.000 0.72 0.00 34.75 2.69
6261 6907 5.786401 ATTAGACTCATTCTGCGTCAAAC 57.214 39.130 0.72 0.00 34.75 2.93
6262 6908 3.393089 AGACTCATTCTGCGTCAAACT 57.607 42.857 0.72 0.00 34.75 2.66
6263 6909 3.062763 AGACTCATTCTGCGTCAAACTG 58.937 45.455 0.72 0.00 34.75 3.16
6264 6910 2.802816 GACTCATTCTGCGTCAAACTGT 59.197 45.455 0.00 0.00 32.72 3.55
6265 6911 2.802816 ACTCATTCTGCGTCAAACTGTC 59.197 45.455 0.00 0.00 0.00 3.51
6266 6912 1.792367 TCATTCTGCGTCAAACTGTCG 59.208 47.619 0.00 0.00 32.37 4.35
6267 6913 1.136252 CATTCTGCGTCAAACTGTCGG 60.136 52.381 0.00 0.00 30.03 4.79
6268 6914 1.495584 TTCTGCGTCAAACTGTCGGC 61.496 55.000 0.00 0.00 30.03 5.54
6269 6915 2.202946 TGCGTCAAACTGTCGGCA 60.203 55.556 0.00 0.00 30.03 5.69
6271 6917 1.954146 GCGTCAAACTGTCGGCAGA 60.954 57.895 26.48 0.00 45.28 4.26
6272 6918 1.291877 GCGTCAAACTGTCGGCAGAT 61.292 55.000 26.48 9.62 45.28 2.90
6273 6919 0.716108 CGTCAAACTGTCGGCAGATC 59.284 55.000 26.48 7.71 45.28 2.75
6274 6920 1.795768 GTCAAACTGTCGGCAGATCA 58.204 50.000 26.48 0.00 45.28 2.92
6275 6921 1.461127 GTCAAACTGTCGGCAGATCAC 59.539 52.381 26.48 8.79 45.28 3.06
6276 6922 1.069978 TCAAACTGTCGGCAGATCACA 59.930 47.619 26.48 0.00 45.28 3.58
6277 6923 1.195448 CAAACTGTCGGCAGATCACAC 59.805 52.381 26.48 0.00 45.28 3.82
6278 6924 0.392706 AACTGTCGGCAGATCACACA 59.607 50.000 26.48 0.00 45.28 3.72
6279 6925 0.392706 ACTGTCGGCAGATCACACAA 59.607 50.000 26.48 0.00 45.28 3.33
6280 6926 1.073964 CTGTCGGCAGATCACACAAG 58.926 55.000 12.86 0.00 45.28 3.16
6281 6927 0.950555 TGTCGGCAGATCACACAAGC 60.951 55.000 0.00 0.00 0.00 4.01
6282 6928 1.737735 TCGGCAGATCACACAAGCG 60.738 57.895 0.00 0.00 0.00 4.68
6283 6929 1.737735 CGGCAGATCACACAAGCGA 60.738 57.895 0.00 0.00 0.00 4.93
6284 6930 1.690283 CGGCAGATCACACAAGCGAG 61.690 60.000 0.00 0.00 0.00 5.03
6285 6931 1.423056 GCAGATCACACAAGCGAGC 59.577 57.895 0.00 0.00 0.00 5.03
6286 6932 1.018226 GCAGATCACACAAGCGAGCT 61.018 55.000 0.00 0.00 0.00 4.09
6287 6933 1.737029 GCAGATCACACAAGCGAGCTA 60.737 52.381 0.00 0.00 0.00 3.32
6288 6934 2.191802 CAGATCACACAAGCGAGCTAG 58.808 52.381 0.00 0.00 0.00 3.42
6289 6935 0.926846 GATCACACAAGCGAGCTAGC 59.073 55.000 11.29 11.29 37.41 3.42
6290 6936 0.460987 ATCACACAAGCGAGCTAGCC 60.461 55.000 15.76 1.79 38.01 3.93
6291 6937 1.079543 CACACAAGCGAGCTAGCCT 60.080 57.895 15.76 0.00 38.01 4.58
6292 6938 0.173481 CACACAAGCGAGCTAGCCTA 59.827 55.000 15.76 0.00 38.01 3.93
6293 6939 0.457851 ACACAAGCGAGCTAGCCTAG 59.542 55.000 15.76 8.10 38.01 3.02
6306 6952 1.406903 AGCCTAGCAATCCATTTGGC 58.593 50.000 0.00 0.00 39.19 4.52
6307 6953 1.113788 GCCTAGCAATCCATTTGGCA 58.886 50.000 0.00 0.00 38.79 4.92
6308 6954 1.202452 GCCTAGCAATCCATTTGGCAC 60.202 52.381 0.00 0.00 38.79 5.01
6309 6955 1.066002 CCTAGCAATCCATTTGGCACG 59.934 52.381 0.00 0.00 35.75 5.34
6310 6956 1.066002 CTAGCAATCCATTTGGCACGG 59.934 52.381 0.00 0.00 35.75 4.94
6311 6957 1.810853 GCAATCCATTTGGCACGGC 60.811 57.895 0.00 0.00 35.75 5.68
6322 6968 3.460648 GGCACGGCCCATCTATATC 57.539 57.895 0.00 0.00 44.06 1.63
6323 6969 0.460284 GGCACGGCCCATCTATATCG 60.460 60.000 0.00 0.00 44.06 2.92
6324 6970 0.246635 GCACGGCCCATCTATATCGT 59.753 55.000 0.00 0.00 0.00 3.73
6325 6971 1.475280 GCACGGCCCATCTATATCGTA 59.525 52.381 0.00 0.00 0.00 3.43
6326 6972 2.734492 GCACGGCCCATCTATATCGTAC 60.734 54.545 0.00 0.00 0.00 3.67
6327 6973 1.741706 ACGGCCCATCTATATCGTACG 59.258 52.381 9.53 9.53 0.00 3.67
6328 6974 1.741706 CGGCCCATCTATATCGTACGT 59.258 52.381 16.05 5.39 0.00 3.57
6329 6975 2.938451 CGGCCCATCTATATCGTACGTA 59.062 50.000 16.05 7.55 0.00 3.57
6330 6976 3.242543 CGGCCCATCTATATCGTACGTAC 60.243 52.174 15.90 15.90 0.00 3.67
6331 6977 3.691118 GGCCCATCTATATCGTACGTACA 59.309 47.826 24.50 12.54 0.00 2.90
6332 6978 4.201891 GGCCCATCTATATCGTACGTACAG 60.202 50.000 24.50 16.73 0.00 2.74
6333 6979 4.730035 GCCCATCTATATCGTACGTACAGC 60.730 50.000 24.50 0.00 0.00 4.40
6334 6980 4.201891 CCCATCTATATCGTACGTACAGCC 60.202 50.000 24.50 0.00 0.00 4.85
6335 6981 4.634883 CCATCTATATCGTACGTACAGCCT 59.365 45.833 24.50 9.34 0.00 4.58
6336 6982 5.123502 CCATCTATATCGTACGTACAGCCTT 59.876 44.000 24.50 8.19 0.00 4.35
6337 6983 6.349115 CCATCTATATCGTACGTACAGCCTTT 60.349 42.308 24.50 7.21 0.00 3.11
6338 6984 6.624352 TCTATATCGTACGTACAGCCTTTT 57.376 37.500 24.50 5.77 0.00 2.27
6339 6985 7.031226 TCTATATCGTACGTACAGCCTTTTT 57.969 36.000 24.50 4.32 0.00 1.94
6340 6986 7.134815 TCTATATCGTACGTACAGCCTTTTTC 58.865 38.462 24.50 0.00 0.00 2.29
6341 6987 3.367992 TCGTACGTACAGCCTTTTTCA 57.632 42.857 24.50 0.00 0.00 2.69
6342 6988 3.311106 TCGTACGTACAGCCTTTTTCAG 58.689 45.455 24.50 4.71 0.00 3.02
6344 6990 2.632987 ACGTACAGCCTTTTTCAGGT 57.367 45.000 0.00 0.00 46.07 4.00
6345 6991 2.927028 ACGTACAGCCTTTTTCAGGTT 58.073 42.857 0.00 0.00 46.07 3.50
6346 6992 2.876550 ACGTACAGCCTTTTTCAGGTTC 59.123 45.455 0.00 0.00 46.07 3.62
6347 6993 3.139077 CGTACAGCCTTTTTCAGGTTCT 58.861 45.455 0.00 0.00 46.07 3.01
6348 6994 3.058914 CGTACAGCCTTTTTCAGGTTCTG 60.059 47.826 0.00 0.00 46.07 3.02
6349 6995 2.310538 ACAGCCTTTTTCAGGTTCTGG 58.689 47.619 0.00 0.00 46.07 3.86
6350 6996 2.310538 CAGCCTTTTTCAGGTTCTGGT 58.689 47.619 0.00 0.00 46.07 4.00
6351 6997 2.695147 CAGCCTTTTTCAGGTTCTGGTT 59.305 45.455 0.00 0.00 46.07 3.67
6352 6998 3.132824 CAGCCTTTTTCAGGTTCTGGTTT 59.867 43.478 0.00 0.00 46.07 3.27
6353 6999 3.774766 AGCCTTTTTCAGGTTCTGGTTTT 59.225 39.130 0.00 0.00 46.07 2.43
6354 7000 3.871006 GCCTTTTTCAGGTTCTGGTTTTG 59.129 43.478 0.00 0.00 46.07 2.44
6355 7001 4.441792 CCTTTTTCAGGTTCTGGTTTTGG 58.558 43.478 0.00 0.00 37.99 3.28
6356 7002 4.441792 CTTTTTCAGGTTCTGGTTTTGGG 58.558 43.478 0.00 0.00 31.51 4.12
6357 7003 3.390175 TTTCAGGTTCTGGTTTTGGGA 57.610 42.857 0.00 0.00 31.51 4.37
6358 7004 3.390175 TTCAGGTTCTGGTTTTGGGAA 57.610 42.857 0.00 0.00 31.51 3.97
6359 7005 2.661718 TCAGGTTCTGGTTTTGGGAAC 58.338 47.619 0.00 0.00 38.71 3.62
6376 7022 2.547990 GAACCTTCTAGAGGGTTCCCA 58.452 52.381 38.50 5.99 45.88 4.37
6377 7023 2.502130 GAACCTTCTAGAGGGTTCCCAG 59.498 54.545 38.50 14.36 45.88 4.45
6378 7024 0.833949 CCTTCTAGAGGGTTCCCAGC 59.166 60.000 12.74 1.91 42.26 4.85
6379 7025 1.573108 CTTCTAGAGGGTTCCCAGCA 58.427 55.000 10.73 0.00 0.00 4.41
6380 7026 1.484240 CTTCTAGAGGGTTCCCAGCAG 59.516 57.143 10.73 3.86 0.00 4.24
6381 7027 0.325671 TCTAGAGGGTTCCCAGCAGG 60.326 60.000 10.73 0.00 0.00 4.85
6382 7028 0.618968 CTAGAGGGTTCCCAGCAGGT 60.619 60.000 10.73 0.00 36.75 4.00
6383 7029 0.178873 TAGAGGGTTCCCAGCAGGTT 60.179 55.000 10.73 0.00 36.75 3.50
6384 7030 1.068352 AGAGGGTTCCCAGCAGGTTT 61.068 55.000 10.73 0.00 36.75 3.27
6385 7031 0.178961 GAGGGTTCCCAGCAGGTTTT 60.179 55.000 10.73 0.00 36.75 2.43
6386 7032 0.264657 AGGGTTCCCAGCAGGTTTTT 59.735 50.000 10.73 0.00 36.75 1.94
6387 7033 0.392706 GGGTTCCCAGCAGGTTTTTG 59.607 55.000 2.59 0.00 36.75 2.44
6388 7034 0.249868 GGTTCCCAGCAGGTTTTTGC 60.250 55.000 0.00 0.00 44.41 3.68
6389 7035 0.249868 GTTCCCAGCAGGTTTTTGCC 60.250 55.000 0.00 0.00 45.18 4.52
6390 7036 1.743321 TTCCCAGCAGGTTTTTGCCG 61.743 55.000 0.00 0.00 45.18 5.69
6391 7037 2.339712 CCAGCAGGTTTTTGCCGG 59.660 61.111 0.00 0.00 45.18 6.13
6392 7038 2.498056 CCAGCAGGTTTTTGCCGGT 61.498 57.895 1.90 0.00 45.18 5.28
6393 7039 1.441311 CAGCAGGTTTTTGCCGGTT 59.559 52.632 1.90 0.00 45.18 4.44
6394 7040 0.179086 CAGCAGGTTTTTGCCGGTTT 60.179 50.000 1.90 0.00 45.18 3.27
6395 7041 0.539518 AGCAGGTTTTTGCCGGTTTT 59.460 45.000 1.90 0.00 45.18 2.43
6396 7042 0.655208 GCAGGTTTTTGCCGGTTTTG 59.345 50.000 1.90 0.00 38.13 2.44
6397 7043 1.294857 CAGGTTTTTGCCGGTTTTGG 58.705 50.000 1.90 0.00 0.00 3.28
6398 7044 0.179234 AGGTTTTTGCCGGTTTTGGG 59.821 50.000 1.90 0.00 0.00 4.12
6399 7045 0.178301 GGTTTTTGCCGGTTTTGGGA 59.822 50.000 1.90 0.00 0.00 4.37
6400 7046 1.407025 GGTTTTTGCCGGTTTTGGGAA 60.407 47.619 1.90 0.00 37.59 3.97
6401 7047 1.666700 GTTTTTGCCGGTTTTGGGAAC 59.333 47.619 1.90 0.00 39.23 3.62
6419 7065 4.635699 GAACCTTCTAGAGGGTTCCAAA 57.364 45.455 38.50 5.31 45.88 3.28
6420 7066 4.981812 GAACCTTCTAGAGGGTTCCAAAA 58.018 43.478 38.50 4.62 45.88 2.44
6421 7067 4.726583 AACCTTCTAGAGGGTTCCAAAAC 58.273 43.478 28.64 0.00 45.88 2.43
6422 7068 4.415846 AACCTTCTAGAGGGTTCCAAAACT 59.584 41.667 28.64 8.85 45.88 2.66
6423 7069 4.327680 CCTTCTAGAGGGTTCCAAAACTG 58.672 47.826 12.74 0.00 42.26 3.16
6424 7070 4.041691 CCTTCTAGAGGGTTCCAAAACTGA 59.958 45.833 12.74 0.00 42.26 3.41
6425 7071 4.618920 TCTAGAGGGTTCCAAAACTGAC 57.381 45.455 0.00 0.00 35.61 3.51
6426 7072 3.971305 TCTAGAGGGTTCCAAAACTGACA 59.029 43.478 0.00 0.00 35.61 3.58
6427 7073 3.884037 AGAGGGTTCCAAAACTGACAT 57.116 42.857 0.00 0.00 35.61 3.06
6428 7074 3.490348 AGAGGGTTCCAAAACTGACATG 58.510 45.455 0.00 0.00 35.61 3.21
6429 7075 3.117512 AGAGGGTTCCAAAACTGACATGT 60.118 43.478 0.00 0.00 35.61 3.21
6430 7076 3.636764 GAGGGTTCCAAAACTGACATGTT 59.363 43.478 0.00 0.00 35.61 2.71
6431 7077 4.030216 AGGGTTCCAAAACTGACATGTTT 58.970 39.130 0.00 0.00 41.32 2.83
6432 7078 5.205056 AGGGTTCCAAAACTGACATGTTTA 58.795 37.500 0.00 0.00 38.98 2.01
6433 7079 5.659079 AGGGTTCCAAAACTGACATGTTTAA 59.341 36.000 0.00 0.00 38.98 1.52
6434 7080 6.155393 AGGGTTCCAAAACTGACATGTTTAAA 59.845 34.615 0.00 0.00 38.98 1.52
6435 7081 6.819146 GGGTTCCAAAACTGACATGTTTAAAA 59.181 34.615 0.00 0.00 38.98 1.52
6436 7082 7.334671 GGGTTCCAAAACTGACATGTTTAAAAA 59.665 33.333 0.00 0.00 38.98 1.94
6437 7083 8.888716 GGTTCCAAAACTGACATGTTTAAAAAT 58.111 29.630 0.00 0.00 38.98 1.82
6438 7084 9.701355 GTTCCAAAACTGACATGTTTAAAAATG 57.299 29.630 15.55 15.55 38.98 2.32
6439 7085 9.442047 TTCCAAAACTGACATGTTTAAAAATGT 57.558 25.926 21.52 21.52 38.98 2.71
6440 7086 9.442047 TCCAAAACTGACATGTTTAAAAATGTT 57.558 25.926 22.10 6.86 38.98 2.71
6441 7087 9.701355 CCAAAACTGACATGTTTAAAAATGTTC 57.299 29.630 22.10 15.88 38.98 3.18
6442 7088 9.701355 CAAAACTGACATGTTTAAAAATGTTCC 57.299 29.630 22.10 12.68 38.98 3.62
6443 7089 9.665719 AAAACTGACATGTTTAAAAATGTTCCT 57.334 25.926 22.10 7.45 38.98 3.36
6444 7090 8.871686 AACTGACATGTTTAAAAATGTTCCTC 57.128 30.769 22.10 11.77 37.15 3.71
6445 7091 8.237811 ACTGACATGTTTAAAAATGTTCCTCT 57.762 30.769 22.10 1.57 37.15 3.69
6446 7092 8.695456 ACTGACATGTTTAAAAATGTTCCTCTT 58.305 29.630 22.10 0.90 37.15 2.85
6447 7093 9.533253 CTGACATGTTTAAAAATGTTCCTCTTT 57.467 29.630 22.10 0.22 37.15 2.52
6448 7094 9.883142 TGACATGTTTAAAAATGTTCCTCTTTT 57.117 25.926 22.10 0.00 37.15 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 7.114247 GTGTACATGTTTAATGCGATGTTTGTT 59.886 33.333 2.30 0.00 31.56 2.83
103 104 4.257731 TCTGCTCTTTGTGTGTTTGTGTA 58.742 39.130 0.00 0.00 0.00 2.90
115 116 6.822676 ACTTTATTCTGGATCTCTGCTCTTTG 59.177 38.462 0.00 0.00 0.00 2.77
117 118 6.347696 CACTTTATTCTGGATCTCTGCTCTT 58.652 40.000 0.00 0.00 0.00 2.85
207 208 1.009829 CTCGAGCCGGATTCCAAAAG 58.990 55.000 5.05 0.00 0.00 2.27
269 270 8.783093 CGGAAGATTGAATAATAGCATGGTTTA 58.217 33.333 1.12 2.53 0.00 2.01
337 338 1.589399 CCCTCCCTCACTCCCTCTCT 61.589 65.000 0.00 0.00 0.00 3.10
347 348 1.230650 TCTCTCTCCCCCTCCCTCA 60.231 63.158 0.00 0.00 0.00 3.86
348 349 0.996762 TCTCTCTCTCCCCCTCCCTC 60.997 65.000 0.00 0.00 0.00 4.30
349 350 0.998945 CTCTCTCTCTCCCCCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
350 351 1.541672 CTCTCTCTCTCCCCCTCCC 59.458 68.421 0.00 0.00 0.00 4.30
351 352 1.541672 CCTCTCTCTCTCCCCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
352 353 1.541672 CCCTCTCTCTCTCCCCCTC 59.458 68.421 0.00 0.00 0.00 4.30
353 354 2.018086 CCCCTCTCTCTCTCCCCCT 61.018 68.421 0.00 0.00 0.00 4.79
354 355 2.612251 CCCCTCTCTCTCTCCCCC 59.388 72.222 0.00 0.00 0.00 5.40
355 356 2.612251 CCCCCTCTCTCTCTCCCC 59.388 72.222 0.00 0.00 0.00 4.81
356 357 2.123033 GCCCCCTCTCTCTCTCCC 60.123 72.222 0.00 0.00 0.00 4.30
357 358 1.760480 GTGCCCCCTCTCTCTCTCC 60.760 68.421 0.00 0.00 0.00 3.71
358 359 0.398381 ATGTGCCCCCTCTCTCTCTC 60.398 60.000 0.00 0.00 0.00 3.20
359 360 0.690411 CATGTGCCCCCTCTCTCTCT 60.690 60.000 0.00 0.00 0.00 3.10
360 361 0.689080 TCATGTGCCCCCTCTCTCTC 60.689 60.000 0.00 0.00 0.00 3.20
361 362 0.980231 GTCATGTGCCCCCTCTCTCT 60.980 60.000 0.00 0.00 0.00 3.10
362 363 1.524482 GTCATGTGCCCCCTCTCTC 59.476 63.158 0.00 0.00 0.00 3.20
363 364 2.362369 CGTCATGTGCCCCCTCTCT 61.362 63.158 0.00 0.00 0.00 3.10
364 365 2.187946 CGTCATGTGCCCCCTCTC 59.812 66.667 0.00 0.00 0.00 3.20
365 366 2.607750 ACGTCATGTGCCCCCTCT 60.608 61.111 0.00 0.00 0.00 3.69
366 367 2.125106 GACGTCATGTGCCCCCTC 60.125 66.667 11.55 0.00 0.00 4.30
367 368 2.927856 TGACGTCATGTGCCCCCT 60.928 61.111 15.76 0.00 0.00 4.79
380 381 2.160417 GGGAAAGATGCTTGAACTGACG 59.840 50.000 0.00 0.00 0.00 4.35
642 643 7.341805 ACCAAGATGCATAAGAGTATTGTTCT 58.658 34.615 0.00 0.00 0.00 3.01
643 644 7.559590 ACCAAGATGCATAAGAGTATTGTTC 57.440 36.000 0.00 0.00 0.00 3.18
644 645 7.148018 CCAACCAAGATGCATAAGAGTATTGTT 60.148 37.037 0.00 0.00 0.00 2.83
646 647 6.543465 TCCAACCAAGATGCATAAGAGTATTG 59.457 38.462 0.00 0.00 0.00 1.90
647 648 6.662755 TCCAACCAAGATGCATAAGAGTATT 58.337 36.000 0.00 0.00 0.00 1.89
708 911 1.471676 CCTAACATGGCGACTCTGTCC 60.472 57.143 0.00 0.00 0.00 4.02
717 920 0.881118 AAGCACAACCTAACATGGCG 59.119 50.000 0.00 0.00 0.00 5.69
767 970 1.326328 CTCGAGGCAGATGAGATCCA 58.674 55.000 3.91 0.00 31.31 3.41
929 1132 0.905357 ACAATCTCTCTTCCCACCCG 59.095 55.000 0.00 0.00 0.00 5.28
992 1195 4.637387 ATCCCAATCCTCATCTGTGATC 57.363 45.455 0.00 0.00 32.98 2.92
1046 1249 0.473755 TTTCTGCTTGCTCAGGTCCA 59.526 50.000 0.00 0.00 34.91 4.02
1152 1355 6.505272 AGTTAGTAATTAAGAGCACTAGCCG 58.495 40.000 0.00 0.00 43.56 5.52
1314 1517 3.922171 AGTGAAATCAAGCTAGGGAGG 57.078 47.619 0.00 0.00 0.00 4.30
1315 1518 7.872113 AATTAAGTGAAATCAAGCTAGGGAG 57.128 36.000 0.00 0.00 0.00 4.30
1609 1824 5.690464 ATCCTCCATATCATAAGACAGGC 57.310 43.478 0.00 0.00 0.00 4.85
1709 1957 5.296283 CCACTTGAGCCTCTTCTTTATCATG 59.704 44.000 0.00 0.00 0.00 3.07
1795 2070 7.106239 AGGAAGACGAGAAACATTAACATGAT 58.894 34.615 0.00 0.00 34.11 2.45
1809 2099 2.025605 TGGGCTTACTAGGAAGACGAGA 60.026 50.000 19.46 0.00 35.04 4.04
1859 2158 2.478872 TAGCCTCCTGGACATAGCTT 57.521 50.000 10.07 0.00 34.57 3.74
2177 2497 3.244215 TGCGGAAAAGTCTCTTCATGTCT 60.244 43.478 0.00 0.00 0.00 3.41
2180 2500 3.499918 AGTTGCGGAAAAGTCTCTTCATG 59.500 43.478 0.00 0.00 0.00 3.07
3038 3394 6.925718 TCTCAATAAGTGCATCGAAATAGAGG 59.074 38.462 0.00 0.00 0.00 3.69
3388 3750 1.228154 GGGTCAGGGTCACCACAAC 60.228 63.158 0.00 0.00 40.13 3.32
3446 3832 7.484007 CAGACATCACTTGCAATCTTCAAATAC 59.516 37.037 0.00 0.00 0.00 1.89
3680 4087 3.386078 TGAGATGAAGATCCTGCAGGTAC 59.614 47.826 31.58 24.33 36.34 3.34
3838 4245 5.366482 TGAAGCACCATAGCCAATACTAA 57.634 39.130 0.00 0.00 34.23 2.24
3958 4538 1.327303 GCCATGTTTCTCAACCCACA 58.673 50.000 0.00 0.00 31.02 4.17
4011 4591 8.585471 AGAATATCAACACAAACCATCTTCAT 57.415 30.769 0.00 0.00 0.00 2.57
4020 4600 4.693566 TCCACCGAGAATATCAACACAAAC 59.306 41.667 0.00 0.00 0.00 2.93
4268 4848 1.001633 ACTTTATGTCGTCGTTGGCCT 59.998 47.619 3.32 0.00 0.00 5.19
4276 4856 2.921121 TCATGTCGCACTTTATGTCGTC 59.079 45.455 0.00 0.00 32.07 4.20
4283 4863 3.407698 ACCATGTTCATGTCGCACTTTA 58.592 40.909 11.13 0.00 0.00 1.85
4289 4869 1.062587 GCAGTACCATGTTCATGTCGC 59.937 52.381 11.13 3.69 0.00 5.19
4361 4941 2.264455 AGATCAGAAACTGCACCCTCT 58.736 47.619 0.00 0.00 0.00 3.69
4386 4966 0.467384 ATGAAGGTCCTCGAGGCATG 59.533 55.000 27.39 3.01 34.44 4.06
4539 5134 8.088365 GGAACATTTTTACCTTTTATCAGCTGT 58.912 33.333 14.67 3.75 0.00 4.40
4600 5202 3.945285 GGTTAATTGAGGAATCGAAGCCA 59.055 43.478 9.28 0.00 0.00 4.75
4699 5306 3.315418 CATACGCAGATCATCCAGACTG 58.685 50.000 0.00 0.00 0.00 3.51
4809 5416 4.814147 TCTCTATCAGCACAAGTTGACTG 58.186 43.478 18.59 18.59 37.82 3.51
4838 5445 2.582052 TGGTGCAGTAACTTCAAAGGG 58.418 47.619 0.00 0.00 0.00 3.95
4873 5481 4.470334 TTCTGGAAAAATAATGGCAGGC 57.530 40.909 0.00 0.00 0.00 4.85
4925 5551 1.069703 CACCTTGTCGAACATGTGCTG 60.070 52.381 0.00 0.00 28.99 4.41
4954 5580 4.070552 AGCTTCCCCACGTCGCTC 62.071 66.667 0.00 0.00 0.00 5.03
5297 5923 4.473520 CCGCACCCGCTTCTGGAT 62.474 66.667 0.00 0.00 35.30 3.41
5433 6059 1.424493 GGAGGAATGCGCTTCTGTCG 61.424 60.000 9.73 0.00 34.08 4.35
5465 6091 1.202348 CGATCGAGCTCACCTTCACAT 60.202 52.381 15.40 0.00 0.00 3.21
5575 6201 2.042686 TGCTGGCCTATGTCAATGTC 57.957 50.000 3.32 0.00 0.00 3.06
5583 6213 4.660789 AAAGCTTAAATGCTGGCCTATG 57.339 40.909 3.32 0.00 43.24 2.23
5720 6350 4.464008 AGTGGCAAAGTCTGAAGATGAAA 58.536 39.130 0.00 0.00 0.00 2.69
5766 6405 8.956426 TGGAAATAGAAAAGAATAACGCAGAAT 58.044 29.630 0.00 0.00 0.00 2.40
5921 6564 5.584253 TTAGCGAAGATAGCTTTCAGTCT 57.416 39.130 6.94 1.29 43.24 3.24
5966 6609 5.246656 ACTTTGCCATTGAGGATGAAATGAA 59.753 36.000 0.00 0.00 41.22 2.57
5967 6610 4.773674 ACTTTGCCATTGAGGATGAAATGA 59.226 37.500 0.00 0.00 41.22 2.57
5968 6611 5.080969 ACTTTGCCATTGAGGATGAAATG 57.919 39.130 0.00 0.00 41.22 2.32
5969 6612 4.773674 TGACTTTGCCATTGAGGATGAAAT 59.226 37.500 0.00 0.00 41.22 2.17
5970 6613 4.151121 TGACTTTGCCATTGAGGATGAAA 58.849 39.130 0.00 0.00 41.22 2.69
6006 6652 1.479323 CCGTAACCTGCTAGCACCTTA 59.521 52.381 14.93 9.15 0.00 2.69
6012 6658 1.442148 CTCCCCGTAACCTGCTAGC 59.558 63.158 8.10 8.10 0.00 3.42
6016 6662 2.125106 CAGCTCCCCGTAACCTGC 60.125 66.667 0.00 0.00 0.00 4.85
6029 6675 4.499696 GCCACACAATAAACAGAAACAGCT 60.500 41.667 0.00 0.00 0.00 4.24
6030 6676 3.735746 GCCACACAATAAACAGAAACAGC 59.264 43.478 0.00 0.00 0.00 4.40
6089 6735 8.145122 TCGGAAAAAGCCAAAACAACTTATTAT 58.855 29.630 0.00 0.00 0.00 1.28
6094 6740 3.930229 GTCGGAAAAAGCCAAAACAACTT 59.070 39.130 0.00 0.00 0.00 2.66
6096 6742 3.254892 TGTCGGAAAAAGCCAAAACAAC 58.745 40.909 0.00 0.00 0.00 3.32
6097 6743 3.594603 TGTCGGAAAAAGCCAAAACAA 57.405 38.095 0.00 0.00 0.00 2.83
6099 6745 2.284150 GCTTGTCGGAAAAAGCCAAAAC 59.716 45.455 13.16 0.00 42.40 2.43
6100 6746 2.545731 GCTTGTCGGAAAAAGCCAAAA 58.454 42.857 13.16 0.00 42.40 2.44
6101 6747 2.217429 GCTTGTCGGAAAAAGCCAAA 57.783 45.000 13.16 0.00 42.40 3.28
6102 6748 3.957383 GCTTGTCGGAAAAAGCCAA 57.043 47.368 13.16 0.00 42.40 4.52
6106 6752 3.708563 TTTGGAGCTTGTCGGAAAAAG 57.291 42.857 0.00 0.00 0.00 2.27
6107 6753 4.177783 GTTTTTGGAGCTTGTCGGAAAAA 58.822 39.130 0.00 0.00 30.37 1.94
6108 6754 3.429684 GGTTTTTGGAGCTTGTCGGAAAA 60.430 43.478 0.00 0.00 0.00 2.29
6109 6755 2.100087 GGTTTTTGGAGCTTGTCGGAAA 59.900 45.455 0.00 0.00 0.00 3.13
6110 6756 1.679153 GGTTTTTGGAGCTTGTCGGAA 59.321 47.619 0.00 0.00 0.00 4.30
6111 6757 1.314730 GGTTTTTGGAGCTTGTCGGA 58.685 50.000 0.00 0.00 0.00 4.55
6112 6758 1.001378 CTGGTTTTTGGAGCTTGTCGG 60.001 52.381 0.00 0.00 0.00 4.79
6113 6759 1.600413 GCTGGTTTTTGGAGCTTGTCG 60.600 52.381 0.00 0.00 0.00 4.35
6114 6760 1.408702 TGCTGGTTTTTGGAGCTTGTC 59.591 47.619 0.00 0.00 33.66 3.18
6115 6761 1.484038 TGCTGGTTTTTGGAGCTTGT 58.516 45.000 0.00 0.00 33.66 3.16
6116 6762 2.600470 TTGCTGGTTTTTGGAGCTTG 57.400 45.000 0.00 0.00 33.66 4.01
6117 6763 3.625649 TTTTGCTGGTTTTTGGAGCTT 57.374 38.095 0.00 0.00 33.66 3.74
6118 6764 3.134442 TCATTTTGCTGGTTTTTGGAGCT 59.866 39.130 0.00 0.00 33.66 4.09
6119 6765 3.248363 GTCATTTTGCTGGTTTTTGGAGC 59.752 43.478 0.00 0.00 0.00 4.70
6120 6766 4.440880 TGTCATTTTGCTGGTTTTTGGAG 58.559 39.130 0.00 0.00 0.00 3.86
6121 6767 4.478206 TGTCATTTTGCTGGTTTTTGGA 57.522 36.364 0.00 0.00 0.00 3.53
6122 6768 4.575645 ACATGTCATTTTGCTGGTTTTTGG 59.424 37.500 0.00 0.00 0.00 3.28
6123 6769 5.738118 ACATGTCATTTTGCTGGTTTTTG 57.262 34.783 0.00 0.00 0.00 2.44
6124 6770 6.756299 AAACATGTCATTTTGCTGGTTTTT 57.244 29.167 0.00 0.00 0.00 1.94
6125 6771 7.173047 GGATAAACATGTCATTTTGCTGGTTTT 59.827 33.333 0.00 0.00 0.00 2.43
6126 6772 6.650390 GGATAAACATGTCATTTTGCTGGTTT 59.350 34.615 0.00 0.00 0.00 3.27
6127 6773 6.165577 GGATAAACATGTCATTTTGCTGGTT 58.834 36.000 0.00 0.00 0.00 3.67
6128 6774 5.337491 GGGATAAACATGTCATTTTGCTGGT 60.337 40.000 0.00 0.00 0.00 4.00
6129 6775 5.111293 GGGATAAACATGTCATTTTGCTGG 58.889 41.667 0.00 0.00 0.00 4.85
6130 6776 5.105228 AGGGGATAAACATGTCATTTTGCTG 60.105 40.000 0.00 0.00 0.00 4.41
6131 6777 5.025453 AGGGGATAAACATGTCATTTTGCT 58.975 37.500 0.00 0.00 0.00 3.91
6132 6778 5.343307 AGGGGATAAACATGTCATTTTGC 57.657 39.130 0.00 0.00 0.00 3.68
6133 6779 6.183360 GGGTAGGGGATAAACATGTCATTTTG 60.183 42.308 0.00 0.00 0.00 2.44
6134 6780 5.897250 GGGTAGGGGATAAACATGTCATTTT 59.103 40.000 0.00 0.00 0.00 1.82
6135 6781 5.043732 TGGGTAGGGGATAAACATGTCATTT 60.044 40.000 0.00 0.00 0.00 2.32
6136 6782 4.480537 TGGGTAGGGGATAAACATGTCATT 59.519 41.667 0.00 0.00 0.00 2.57
6137 6783 4.051478 TGGGTAGGGGATAAACATGTCAT 58.949 43.478 0.00 0.00 0.00 3.06
6138 6784 3.465832 TGGGTAGGGGATAAACATGTCA 58.534 45.455 0.00 0.00 0.00 3.58
6139 6785 4.513406 TTGGGTAGGGGATAAACATGTC 57.487 45.455 0.00 0.00 0.00 3.06
6140 6786 4.957606 TTTGGGTAGGGGATAAACATGT 57.042 40.909 0.00 0.00 0.00 3.21
6141 6787 6.836527 TGTATTTTGGGTAGGGGATAAACATG 59.163 38.462 0.00 0.00 0.00 3.21
6142 6788 6.837048 GTGTATTTTGGGTAGGGGATAAACAT 59.163 38.462 0.00 0.00 0.00 2.71
6143 6789 6.189133 GTGTATTTTGGGTAGGGGATAAACA 58.811 40.000 0.00 0.00 0.00 2.83
6144 6790 6.189133 TGTGTATTTTGGGTAGGGGATAAAC 58.811 40.000 0.00 0.00 0.00 2.01
6145 6791 6.404426 TGTGTATTTTGGGTAGGGGATAAA 57.596 37.500 0.00 0.00 0.00 1.40
6146 6792 5.103855 CCTGTGTATTTTGGGTAGGGGATAA 60.104 44.000 0.00 0.00 0.00 1.75
6147 6793 4.414182 CCTGTGTATTTTGGGTAGGGGATA 59.586 45.833 0.00 0.00 0.00 2.59
6148 6794 3.204382 CCTGTGTATTTTGGGTAGGGGAT 59.796 47.826 0.00 0.00 0.00 3.85
6149 6795 2.578940 CCTGTGTATTTTGGGTAGGGGA 59.421 50.000 0.00 0.00 0.00 4.81
6150 6796 2.948600 GCCTGTGTATTTTGGGTAGGGG 60.949 54.545 0.00 0.00 0.00 4.79
6151 6797 2.291282 TGCCTGTGTATTTTGGGTAGGG 60.291 50.000 0.00 0.00 0.00 3.53
6152 6798 3.080300 TGCCTGTGTATTTTGGGTAGG 57.920 47.619 0.00 0.00 0.00 3.18
6153 6799 4.321675 GGTTTGCCTGTGTATTTTGGGTAG 60.322 45.833 0.00 0.00 0.00 3.18
6154 6800 3.574826 GGTTTGCCTGTGTATTTTGGGTA 59.425 43.478 0.00 0.00 0.00 3.69
6155 6801 2.367241 GGTTTGCCTGTGTATTTTGGGT 59.633 45.455 0.00 0.00 0.00 4.51
6156 6802 2.366916 TGGTTTGCCTGTGTATTTTGGG 59.633 45.455 0.00 0.00 35.27 4.12
6157 6803 3.742433 TGGTTTGCCTGTGTATTTTGG 57.258 42.857 0.00 0.00 35.27 3.28
6158 6804 5.633182 GTGTATGGTTTGCCTGTGTATTTTG 59.367 40.000 0.00 0.00 35.27 2.44
6159 6805 5.303078 TGTGTATGGTTTGCCTGTGTATTTT 59.697 36.000 0.00 0.00 35.27 1.82
6160 6806 4.830046 TGTGTATGGTTTGCCTGTGTATTT 59.170 37.500 0.00 0.00 35.27 1.40
6161 6807 4.217550 GTGTGTATGGTTTGCCTGTGTATT 59.782 41.667 0.00 0.00 35.27 1.89
6162 6808 3.756434 GTGTGTATGGTTTGCCTGTGTAT 59.244 43.478 0.00 0.00 35.27 2.29
6163 6809 3.142951 GTGTGTATGGTTTGCCTGTGTA 58.857 45.455 0.00 0.00 35.27 2.90
6164 6810 1.953686 GTGTGTATGGTTTGCCTGTGT 59.046 47.619 0.00 0.00 35.27 3.72
6165 6811 2.030893 CAGTGTGTATGGTTTGCCTGTG 60.031 50.000 0.00 0.00 35.27 3.66
6166 6812 2.158682 TCAGTGTGTATGGTTTGCCTGT 60.159 45.455 0.00 0.00 35.27 4.00
6167 6813 2.503331 TCAGTGTGTATGGTTTGCCTG 58.497 47.619 0.00 0.00 35.27 4.85
6168 6814 2.949177 TCAGTGTGTATGGTTTGCCT 57.051 45.000 0.00 0.00 35.27 4.75
6169 6815 3.317993 AGTTTCAGTGTGTATGGTTTGCC 59.682 43.478 0.00 0.00 0.00 4.52
6170 6816 4.290155 CAGTTTCAGTGTGTATGGTTTGC 58.710 43.478 0.00 0.00 0.00 3.68
6171 6817 4.578516 TCCAGTTTCAGTGTGTATGGTTTG 59.421 41.667 0.00 0.00 0.00 2.93
6172 6818 4.787551 TCCAGTTTCAGTGTGTATGGTTT 58.212 39.130 0.00 0.00 0.00 3.27
6173 6819 4.431416 TCCAGTTTCAGTGTGTATGGTT 57.569 40.909 0.00 0.00 0.00 3.67
6174 6820 4.431416 TTCCAGTTTCAGTGTGTATGGT 57.569 40.909 0.00 0.00 0.00 3.55
6175 6821 5.586243 CCTATTCCAGTTTCAGTGTGTATGG 59.414 44.000 0.00 0.00 0.00 2.74
6176 6822 6.173339 ACCTATTCCAGTTTCAGTGTGTATG 58.827 40.000 0.00 0.00 0.00 2.39
6177 6823 6.374417 ACCTATTCCAGTTTCAGTGTGTAT 57.626 37.500 0.00 0.00 0.00 2.29
6178 6824 5.279809 GGACCTATTCCAGTTTCAGTGTGTA 60.280 44.000 0.00 0.00 45.10 2.90
6179 6825 4.505039 GGACCTATTCCAGTTTCAGTGTGT 60.505 45.833 0.00 0.00 45.10 3.72
6180 6826 4.003648 GGACCTATTCCAGTTTCAGTGTG 58.996 47.826 0.00 0.00 45.10 3.82
6181 6827 4.287766 GGACCTATTCCAGTTTCAGTGT 57.712 45.455 0.00 0.00 45.10 3.55
6204 6850 2.844839 ATGCCTCTCTACCCCGGC 60.845 66.667 0.00 0.00 42.78 6.13
6205 6851 2.511452 CCATGCCTCTCTACCCCGG 61.511 68.421 0.00 0.00 0.00 5.73
6206 6852 1.762460 ACCATGCCTCTCTACCCCG 60.762 63.158 0.00 0.00 0.00 5.73
6207 6853 1.700042 CCACCATGCCTCTCTACCCC 61.700 65.000 0.00 0.00 0.00 4.95
6208 6854 1.700042 CCCACCATGCCTCTCTACCC 61.700 65.000 0.00 0.00 0.00 3.69
6209 6855 1.832912 CCCACCATGCCTCTCTACC 59.167 63.158 0.00 0.00 0.00 3.18
6210 6856 1.147153 GCCCACCATGCCTCTCTAC 59.853 63.158 0.00 0.00 0.00 2.59
6211 6857 2.434843 CGCCCACCATGCCTCTCTA 61.435 63.158 0.00 0.00 0.00 2.43
6212 6858 3.790437 CGCCCACCATGCCTCTCT 61.790 66.667 0.00 0.00 0.00 3.10
6213 6859 4.864334 CCGCCCACCATGCCTCTC 62.864 72.222 0.00 0.00 0.00 3.20
6215 6861 3.936772 TTTCCGCCCACCATGCCTC 62.937 63.158 0.00 0.00 0.00 4.70
6216 6862 2.803593 AATTTCCGCCCACCATGCCT 62.804 55.000 0.00 0.00 0.00 4.75
6217 6863 2.296814 GAATTTCCGCCCACCATGCC 62.297 60.000 0.00 0.00 0.00 4.40
6218 6864 1.141665 GAATTTCCGCCCACCATGC 59.858 57.895 0.00 0.00 0.00 4.06
6219 6865 0.684153 AGGAATTTCCGCCCACCATG 60.684 55.000 9.77 0.00 42.75 3.66
6220 6866 0.923358 TAGGAATTTCCGCCCACCAT 59.077 50.000 9.77 0.00 42.75 3.55
6221 6867 0.923358 ATAGGAATTTCCGCCCACCA 59.077 50.000 9.77 0.00 42.75 4.17
6222 6868 2.067365 AATAGGAATTTCCGCCCACC 57.933 50.000 9.77 0.00 42.75 4.61
6223 6869 3.813724 GTCTAATAGGAATTTCCGCCCAC 59.186 47.826 9.77 0.66 42.75 4.61
6224 6870 3.714798 AGTCTAATAGGAATTTCCGCCCA 59.285 43.478 9.77 0.00 42.75 5.36
6225 6871 4.202326 TGAGTCTAATAGGAATTTCCGCCC 60.202 45.833 9.77 0.00 42.75 6.13
6226 6872 4.957296 TGAGTCTAATAGGAATTTCCGCC 58.043 43.478 9.77 0.00 42.75 6.13
6227 6873 6.931840 AGAATGAGTCTAATAGGAATTTCCGC 59.068 38.462 9.77 0.00 36.77 5.54
6228 6874 7.095439 GCAGAATGAGTCTAATAGGAATTTCCG 60.095 40.741 9.77 0.00 39.54 4.30
6229 6875 7.095439 CGCAGAATGAGTCTAATAGGAATTTCC 60.095 40.741 7.39 7.39 39.69 3.13
6230 6876 7.791949 CGCAGAATGAGTCTAATAGGAATTTC 58.208 38.462 0.00 0.00 39.69 2.17
6231 6877 7.721286 CGCAGAATGAGTCTAATAGGAATTT 57.279 36.000 0.00 0.00 39.69 1.82
6245 6891 2.159920 CGACAGTTTGACGCAGAATGAG 60.160 50.000 5.21 0.00 43.55 2.90
6246 6892 1.792367 CGACAGTTTGACGCAGAATGA 59.208 47.619 5.21 0.00 39.69 2.57
6247 6893 1.136252 CCGACAGTTTGACGCAGAATG 60.136 52.381 0.00 0.00 34.45 2.67
6248 6894 1.148310 CCGACAGTTTGACGCAGAAT 58.852 50.000 0.00 0.00 34.45 2.40
6249 6895 1.495584 GCCGACAGTTTGACGCAGAA 61.496 55.000 0.00 0.00 34.45 3.02
6250 6896 1.954146 GCCGACAGTTTGACGCAGA 60.954 57.895 0.00 0.00 34.45 4.26
6251 6897 2.162921 CTGCCGACAGTTTGACGCAG 62.163 60.000 0.00 0.00 39.22 5.18
6252 6898 2.202946 TGCCGACAGTTTGACGCA 60.203 55.556 0.00 0.00 34.45 5.24
6253 6899 1.291877 ATCTGCCGACAGTTTGACGC 61.292 55.000 0.00 0.00 44.77 5.19
6254 6900 0.716108 GATCTGCCGACAGTTTGACG 59.284 55.000 0.00 0.00 44.77 4.35
6255 6901 1.461127 GTGATCTGCCGACAGTTTGAC 59.539 52.381 0.00 0.00 44.77 3.18
6256 6902 1.069978 TGTGATCTGCCGACAGTTTGA 59.930 47.619 0.00 0.00 44.77 2.69
6257 6903 1.195448 GTGTGATCTGCCGACAGTTTG 59.805 52.381 0.00 0.00 44.77 2.93
6258 6904 1.202639 TGTGTGATCTGCCGACAGTTT 60.203 47.619 0.00 0.00 44.77 2.66
6259 6905 0.392706 TGTGTGATCTGCCGACAGTT 59.607 50.000 0.00 0.00 44.77 3.16
6260 6906 0.392706 TTGTGTGATCTGCCGACAGT 59.607 50.000 0.00 0.00 44.77 3.55
6261 6907 1.073964 CTTGTGTGATCTGCCGACAG 58.926 55.000 0.00 0.00 45.95 3.51
6262 6908 0.950555 GCTTGTGTGATCTGCCGACA 60.951 55.000 0.00 0.00 0.00 4.35
6263 6909 1.790387 GCTTGTGTGATCTGCCGAC 59.210 57.895 0.00 0.00 0.00 4.79
6264 6910 1.737735 CGCTTGTGTGATCTGCCGA 60.738 57.895 0.00 0.00 0.00 5.54
6265 6911 1.690283 CTCGCTTGTGTGATCTGCCG 61.690 60.000 0.00 0.00 31.73 5.69
6266 6912 1.975363 GCTCGCTTGTGTGATCTGCC 61.975 60.000 0.00 0.00 31.73 4.85
6267 6913 1.018226 AGCTCGCTTGTGTGATCTGC 61.018 55.000 0.00 0.00 29.33 4.26
6268 6914 2.191802 CTAGCTCGCTTGTGTGATCTG 58.808 52.381 0.00 0.00 32.36 2.90
6269 6915 1.470632 GCTAGCTCGCTTGTGTGATCT 60.471 52.381 7.70 0.00 34.19 2.75
6270 6916 0.926846 GCTAGCTCGCTTGTGTGATC 59.073 55.000 7.70 0.00 31.73 2.92
6271 6917 0.460987 GGCTAGCTCGCTTGTGTGAT 60.461 55.000 15.72 0.00 31.73 3.06
6272 6918 1.079819 GGCTAGCTCGCTTGTGTGA 60.080 57.895 15.72 0.00 0.00 3.58
6273 6919 0.173481 TAGGCTAGCTCGCTTGTGTG 59.827 55.000 15.72 0.00 0.00 3.82
6274 6920 0.457851 CTAGGCTAGCTCGCTTGTGT 59.542 55.000 15.72 0.00 0.00 3.72
6275 6921 3.264666 CTAGGCTAGCTCGCTTGTG 57.735 57.895 15.72 0.00 0.00 3.33
6282 6928 5.577351 CCAAATGGATTGCTAGGCTAGCTC 61.577 50.000 37.94 29.47 44.62 4.09
6283 6929 3.749954 CCAAATGGATTGCTAGGCTAGCT 60.750 47.826 37.94 24.57 44.62 3.32
6284 6930 2.555757 CCAAATGGATTGCTAGGCTAGC 59.444 50.000 34.16 34.16 44.59 3.42
6285 6931 2.555757 GCCAAATGGATTGCTAGGCTAG 59.444 50.000 17.33 17.33 37.73 3.42
6286 6932 2.091939 TGCCAAATGGATTGCTAGGCTA 60.092 45.455 2.98 0.00 37.73 3.93
6287 6933 1.342275 TGCCAAATGGATTGCTAGGCT 60.342 47.619 2.98 0.00 37.73 4.58
6288 6934 1.113788 TGCCAAATGGATTGCTAGGC 58.886 50.000 2.98 0.00 37.73 3.93
6289 6935 1.066002 CGTGCCAAATGGATTGCTAGG 59.934 52.381 2.98 0.00 37.73 3.02
6290 6936 1.066002 CCGTGCCAAATGGATTGCTAG 59.934 52.381 2.98 0.00 37.06 3.42
6291 6937 1.102154 CCGTGCCAAATGGATTGCTA 58.898 50.000 2.98 0.00 37.06 3.49
6292 6938 1.892338 CCGTGCCAAATGGATTGCT 59.108 52.632 2.98 0.00 37.06 3.91
6293 6939 1.810853 GCCGTGCCAAATGGATTGC 60.811 57.895 2.98 0.00 37.06 3.56
6294 6940 4.500396 GCCGTGCCAAATGGATTG 57.500 55.556 2.98 0.00 37.06 2.67
6305 6951 0.246635 ACGATATAGATGGGCCGTGC 59.753 55.000 1.02 0.00 0.00 5.34
6306 6952 2.477357 CGTACGATATAGATGGGCCGTG 60.477 54.545 10.44 0.00 0.00 4.94
6307 6953 1.741706 CGTACGATATAGATGGGCCGT 59.258 52.381 10.44 0.00 0.00 5.68
6308 6954 1.741706 ACGTACGATATAGATGGGCCG 59.258 52.381 24.41 0.00 0.00 6.13
6309 6955 3.691118 TGTACGTACGATATAGATGGGCC 59.309 47.826 24.41 0.00 0.00 5.80
6310 6956 4.730035 GCTGTACGTACGATATAGATGGGC 60.730 50.000 24.41 7.88 0.00 5.36
6311 6957 4.201891 GGCTGTACGTACGATATAGATGGG 60.202 50.000 24.41 1.90 0.00 4.00
6312 6958 4.634883 AGGCTGTACGTACGATATAGATGG 59.365 45.833 24.41 3.18 0.00 3.51
6313 6959 5.798015 AGGCTGTACGTACGATATAGATG 57.202 43.478 24.41 4.60 0.00 2.90
6314 6960 6.814506 AAAGGCTGTACGTACGATATAGAT 57.185 37.500 24.41 0.00 0.00 1.98
6315 6961 6.624352 AAAAGGCTGTACGTACGATATAGA 57.376 37.500 24.41 1.42 0.00 1.98
6316 6962 6.914215 TGAAAAAGGCTGTACGTACGATATAG 59.086 38.462 24.41 17.28 0.00 1.31
6317 6963 6.794374 TGAAAAAGGCTGTACGTACGATATA 58.206 36.000 24.41 8.05 0.00 0.86
6318 6964 5.653507 TGAAAAAGGCTGTACGTACGATAT 58.346 37.500 24.41 1.48 0.00 1.63
6319 6965 5.058149 TGAAAAAGGCTGTACGTACGATA 57.942 39.130 24.41 7.86 0.00 2.92
6320 6966 3.916761 TGAAAAAGGCTGTACGTACGAT 58.083 40.909 24.41 8.93 0.00 3.73
6321 6967 3.311106 CTGAAAAAGGCTGTACGTACGA 58.689 45.455 24.41 9.08 0.00 3.43
6322 6968 2.410730 CCTGAAAAAGGCTGTACGTACG 59.589 50.000 20.18 15.01 39.93 3.67
6334 6980 4.161377 TCCCAAAACCAGAACCTGAAAAAG 59.839 41.667 0.00 0.00 32.44 2.27
6335 6981 4.097418 TCCCAAAACCAGAACCTGAAAAA 58.903 39.130 0.00 0.00 32.44 1.94
6336 6982 3.714144 TCCCAAAACCAGAACCTGAAAA 58.286 40.909 0.00 0.00 32.44 2.29
6337 6983 3.390175 TCCCAAAACCAGAACCTGAAA 57.610 42.857 0.00 0.00 32.44 2.69
6338 6984 3.028130 GTTCCCAAAACCAGAACCTGAA 58.972 45.455 0.00 0.00 35.03 3.02
6339 6985 2.661718 GTTCCCAAAACCAGAACCTGA 58.338 47.619 0.00 0.00 35.03 3.86
6343 6989 3.296854 AGAAGGTTCCCAAAACCAGAAC 58.703 45.455 9.45 0.00 42.69 3.01
6344 6990 3.680777 AGAAGGTTCCCAAAACCAGAA 57.319 42.857 9.45 0.00 42.69 3.02
6345 6991 3.977999 TCTAGAAGGTTCCCAAAACCAGA 59.022 43.478 9.45 1.05 42.69 3.86
6346 6992 4.327680 CTCTAGAAGGTTCCCAAAACCAG 58.672 47.826 9.45 0.00 42.69 4.00
6347 6993 3.073946 CCTCTAGAAGGTTCCCAAAACCA 59.926 47.826 9.45 0.00 42.69 3.67
6348 6994 3.561528 CCCTCTAGAAGGTTCCCAAAACC 60.562 52.174 0.00 0.00 44.56 3.27
6349 6995 3.074094 ACCCTCTAGAAGGTTCCCAAAAC 59.926 47.826 7.25 0.00 44.56 2.43
6350 6996 3.332968 ACCCTCTAGAAGGTTCCCAAAA 58.667 45.455 7.25 0.00 44.56 2.44
6351 6997 2.999928 ACCCTCTAGAAGGTTCCCAAA 58.000 47.619 7.25 0.00 44.56 3.28
6352 6998 2.735259 ACCCTCTAGAAGGTTCCCAA 57.265 50.000 7.25 0.00 44.56 4.12
6353 6999 2.735259 AACCCTCTAGAAGGTTCCCA 57.265 50.000 18.47 0.00 42.85 4.37
6368 7014 3.576376 GCAAAAACCTGCTGGGAACCC 62.576 57.143 14.82 2.46 39.61 4.11
6369 7015 0.249868 GCAAAAACCTGCTGGGAACC 60.250 55.000 14.82 0.00 40.46 3.62
6370 7016 0.249868 GGCAAAAACCTGCTGGGAAC 60.250 55.000 14.82 0.00 42.25 3.62
6371 7017 1.743321 CGGCAAAAACCTGCTGGGAA 61.743 55.000 14.82 0.00 43.71 3.97
6372 7018 2.199652 CGGCAAAAACCTGCTGGGA 61.200 57.895 14.82 0.00 43.71 4.37
6373 7019 2.339712 CGGCAAAAACCTGCTGGG 59.660 61.111 14.82 4.64 43.71 4.45
6375 7021 0.179086 AAACCGGCAAAAACCTGCTG 60.179 50.000 0.00 0.00 46.45 4.41
6376 7022 0.539518 AAAACCGGCAAAAACCTGCT 59.460 45.000 0.00 0.00 42.25 4.24
6377 7023 0.655208 CAAAACCGGCAAAAACCTGC 59.345 50.000 0.00 0.00 41.85 4.85
6378 7024 1.294857 CCAAAACCGGCAAAAACCTG 58.705 50.000 0.00 0.00 0.00 4.00
6379 7025 0.179234 CCCAAAACCGGCAAAAACCT 59.821 50.000 0.00 0.00 0.00 3.50
6380 7026 0.178301 TCCCAAAACCGGCAAAAACC 59.822 50.000 0.00 0.00 0.00 3.27
6381 7027 1.666700 GTTCCCAAAACCGGCAAAAAC 59.333 47.619 0.00 0.00 0.00 2.43
6382 7028 1.407025 GGTTCCCAAAACCGGCAAAAA 60.407 47.619 0.00 0.00 0.00 1.94
6383 7029 0.178301 GGTTCCCAAAACCGGCAAAA 59.822 50.000 0.00 0.00 0.00 2.44
6384 7030 0.688087 AGGTTCCCAAAACCGGCAAA 60.688 50.000 0.00 0.00 44.82 3.68
6385 7031 0.688087 AAGGTTCCCAAAACCGGCAA 60.688 50.000 0.00 0.00 44.82 4.52
6386 7032 1.075896 AAGGTTCCCAAAACCGGCA 60.076 52.632 0.00 0.00 44.82 5.69
6387 7033 0.826256 AGAAGGTTCCCAAAACCGGC 60.826 55.000 0.00 0.00 44.82 6.13
6388 7034 2.039348 TCTAGAAGGTTCCCAAAACCGG 59.961 50.000 0.00 0.00 44.82 5.28
6389 7035 3.335579 CTCTAGAAGGTTCCCAAAACCG 58.664 50.000 0.00 0.00 44.82 4.44
6390 7036 3.561528 CCCTCTAGAAGGTTCCCAAAACC 60.562 52.174 0.00 0.00 44.56 3.27
6391 7037 3.074094 ACCCTCTAGAAGGTTCCCAAAAC 59.926 47.826 7.25 0.00 44.56 2.43
6392 7038 3.332968 ACCCTCTAGAAGGTTCCCAAAA 58.667 45.455 7.25 0.00 44.56 2.44
6393 7039 2.999928 ACCCTCTAGAAGGTTCCCAAA 58.000 47.619 7.25 0.00 44.56 3.28
6394 7040 2.735259 ACCCTCTAGAAGGTTCCCAA 57.265 50.000 7.25 0.00 44.56 4.12
6395 7041 2.735259 AACCCTCTAGAAGGTTCCCA 57.265 50.000 18.47 0.00 42.85 4.37
6400 7046 3.981375 AGTTTTGGAACCCTCTAGAAGGT 59.019 43.478 7.25 7.25 44.56 3.50
6401 7047 4.041691 TCAGTTTTGGAACCCTCTAGAAGG 59.958 45.833 5.79 5.79 45.77 3.46
6402 7048 4.998033 GTCAGTTTTGGAACCCTCTAGAAG 59.002 45.833 0.00 0.00 36.39 2.85
6403 7049 4.410883 TGTCAGTTTTGGAACCCTCTAGAA 59.589 41.667 0.00 0.00 36.39 2.10
6404 7050 3.971305 TGTCAGTTTTGGAACCCTCTAGA 59.029 43.478 0.00 0.00 36.39 2.43
6405 7051 4.351874 TGTCAGTTTTGGAACCCTCTAG 57.648 45.455 0.00 0.00 36.39 2.43
6406 7052 4.104102 ACATGTCAGTTTTGGAACCCTCTA 59.896 41.667 0.00 0.00 36.39 2.43
6407 7053 3.117512 ACATGTCAGTTTTGGAACCCTCT 60.118 43.478 0.00 0.00 36.39 3.69
6408 7054 3.222603 ACATGTCAGTTTTGGAACCCTC 58.777 45.455 0.00 0.00 36.39 4.30
6409 7055 3.312736 ACATGTCAGTTTTGGAACCCT 57.687 42.857 0.00 0.00 36.39 4.34
6410 7056 4.400529 AAACATGTCAGTTTTGGAACCC 57.599 40.909 0.00 0.00 38.49 4.11
6411 7057 7.835634 TTTTAAACATGTCAGTTTTGGAACC 57.164 32.000 0.00 0.00 41.58 3.62
6412 7058 9.701355 CATTTTTAAACATGTCAGTTTTGGAAC 57.299 29.630 0.00 0.00 41.58 3.62
6413 7059 9.442047 ACATTTTTAAACATGTCAGTTTTGGAA 57.558 25.926 13.07 0.00 41.58 3.53
6414 7060 9.442047 AACATTTTTAAACATGTCAGTTTTGGA 57.558 25.926 17.87 0.00 41.58 3.53
6415 7061 9.701355 GAACATTTTTAAACATGTCAGTTTTGG 57.299 29.630 17.87 0.00 41.58 3.28
6416 7062 9.701355 GGAACATTTTTAAACATGTCAGTTTTG 57.299 29.630 17.87 0.00 41.58 2.44
6417 7063 9.665719 AGGAACATTTTTAAACATGTCAGTTTT 57.334 25.926 17.87 4.12 41.58 2.43
6418 7064 9.313118 GAGGAACATTTTTAAACATGTCAGTTT 57.687 29.630 17.87 4.74 43.58 2.66
6419 7065 8.695456 AGAGGAACATTTTTAAACATGTCAGTT 58.305 29.630 17.87 5.07 32.21 3.16
6420 7066 8.237811 AGAGGAACATTTTTAAACATGTCAGT 57.762 30.769 17.87 5.39 32.21 3.41
6421 7067 9.533253 AAAGAGGAACATTTTTAAACATGTCAG 57.467 29.630 17.87 0.00 32.21 3.51
6422 7068 9.883142 AAAAGAGGAACATTTTTAAACATGTCA 57.117 25.926 17.87 0.00 32.21 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.