Multiple sequence alignment - TraesCS7D01G021200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G021200 chr7D 100.000 5475 0 0 1 5475 10033946 10039420 0.000000e+00 10111.0
1 TraesCS7D01G021200 chr7D 82.218 3363 452 78 2169 5475 10473649 10470377 0.000000e+00 2763.0
2 TraesCS7D01G021200 chr7D 85.779 2194 264 28 3298 5475 10480761 10478600 0.000000e+00 2279.0
3 TraesCS7D01G021200 chr7D 82.720 1412 212 20 2167 3550 10482432 10481025 0.000000e+00 1227.0
4 TraesCS7D01G021200 chr7D 85.446 1120 101 35 1045 2138 10484029 10482946 0.000000e+00 1109.0
5 TraesCS7D01G021200 chr7D 86.441 118 6 4 1045 1152 10475370 10475253 2.680000e-23 121.0
6 TraesCS7D01G021200 chr7D 87.000 100 10 2 1044 1141 8808346 8808444 5.800000e-20 110.0
7 TraesCS7D01G021200 chr4A 97.092 2476 70 2 3002 5475 729744368 729746843 0.000000e+00 4172.0
8 TraesCS7D01G021200 chr4A 96.738 2023 57 5 3002 5021 729140760 729142776 0.000000e+00 3362.0
9 TraesCS7D01G021200 chr4A 85.155 2196 274 34 3298 5475 728431094 728428933 0.000000e+00 2202.0
10 TraesCS7D01G021200 chr4A 85.050 2194 279 32 3298 5475 729860442 729862602 0.000000e+00 2189.0
11 TraesCS7D01G021200 chr4A 82.612 1409 217 23 2167 3555 729533149 729531749 0.000000e+00 1219.0
12 TraesCS7D01G021200 chr4A 82.407 1421 210 24 2167 3555 728432800 728431388 0.000000e+00 1203.0
13 TraesCS7D01G021200 chr4A 82.246 1425 213 26 2167 3559 729858736 729860152 0.000000e+00 1194.0
14 TraesCS7D01G021200 chr4A 84.968 1111 153 10 3298 4401 729531455 729530352 0.000000e+00 1114.0
15 TraesCS7D01G021200 chr4A 83.896 1155 151 18 3298 4442 729683787 729684916 0.000000e+00 1070.0
16 TraesCS7D01G021200 chr4A 87.885 908 89 12 1239 2130 729138493 729139395 0.000000e+00 1048.0
17 TraesCS7D01G021200 chr4A 87.623 913 94 12 4571 5475 729530122 729529221 0.000000e+00 1042.0
18 TraesCS7D01G021200 chr4A 84.253 1105 126 30 1045 2130 728458639 728457564 0.000000e+00 1033.0
19 TraesCS7D01G021200 chr4A 84.896 1013 143 5 3301 4307 729084579 729083571 0.000000e+00 1014.0
20 TraesCS7D01G021200 chr4A 88.264 818 93 2 4661 5475 729706795 729707612 0.000000e+00 976.0
21 TraesCS7D01G021200 chr4A 88.287 794 91 2 4684 5475 718927552 718926759 0.000000e+00 950.0
22 TraesCS7D01G021200 chr4A 89.108 762 79 4 4717 5475 728831351 728832111 0.000000e+00 944.0
23 TraesCS7D01G021200 chr4A 82.251 1093 164 19 2167 3235 729814668 729815754 0.000000e+00 917.0
24 TraesCS7D01G021200 chr4A 94.017 585 35 0 1546 2130 729742419 729743003 0.000000e+00 887.0
25 TraesCS7D01G021200 chr4A 86.453 812 102 8 2167 2975 729743503 729744309 0.000000e+00 883.0
26 TraesCS7D01G021200 chr4A 85.943 811 108 6 2167 2975 729139895 729140701 0.000000e+00 861.0
27 TraesCS7D01G021200 chr4A 86.370 763 97 6 2167 2924 729682149 729682909 0.000000e+00 826.0
28 TraesCS7D01G021200 chr4A 91.414 594 40 6 1 588 729717603 729718191 0.000000e+00 804.0
29 TraesCS7D01G021200 chr4A 88.780 615 63 4 1528 2138 728433895 728433283 0.000000e+00 749.0
30 TraesCS7D01G021200 chr4A 83.061 797 117 13 2169 2962 729049717 729048936 0.000000e+00 708.0
31 TraesCS7D01G021200 chr4A 87.092 612 71 3 1527 2138 718931856 718931253 0.000000e+00 686.0
32 TraesCS7D01G021200 chr4A 87.411 564 70 1 1575 2138 729680992 729681554 0.000000e+00 647.0
33 TraesCS7D01G021200 chr4A 91.202 341 29 1 1798 2138 729857928 729858267 3.860000e-126 462.0
34 TraesCS7D01G021200 chr4A 81.895 475 39 20 1044 1514 729741988 729742419 1.880000e-94 357.0
35 TraesCS7D01G021200 chr4A 90.957 188 12 3 734 920 729719297 729719480 1.180000e-61 248.0
36 TraesCS7D01G021200 chr4A 83.273 275 36 5 2987 3254 728521630 728521901 1.520000e-60 244.0
37 TraesCS7D01G021200 chr4A 94.444 126 6 1 581 706 729719181 729719305 5.600000e-45 193.0
38 TraesCS7D01G021200 chr4A 79.592 245 29 8 1045 1284 728434308 728434080 7.340000e-34 156.0
39 TraesCS7D01G021200 chr4A 89.516 124 7 4 1058 1175 718932252 718932129 9.500000e-33 152.0
40 TraesCS7D01G021200 chr4A 77.027 296 46 16 313 602 729823012 729823291 3.420000e-32 150.0
41 TraesCS7D01G021200 chr4A 76.689 296 47 16 313 602 728648853 728648574 1.590000e-30 145.0
42 TraesCS7D01G021200 chr4A 77.455 275 41 14 334 602 729161338 729161597 1.590000e-30 145.0
43 TraesCS7D01G021200 chr4A 82.550 149 24 1 327 473 729865126 729865274 4.450000e-26 130.0
44 TraesCS7D01G021200 chr4A 95.385 65 3 0 954 1018 729741863 729741927 2.700000e-18 104.0
45 TraesCS7D01G021200 chr4A 84.536 97 11 2 1527 1623 729814143 729814235 5.840000e-15 93.5
46 TraesCS7D01G021200 chr4A 95.652 46 2 0 909 954 729741729 729741774 2.120000e-09 75.0
47 TraesCS7D01G021200 chr7A 83.865 1159 160 19 3298 4444 9331349 9332492 0.000000e+00 1079.0
48 TraesCS7D01G021200 chr7A 89.027 802 83 5 4677 5475 9332786 9333585 0.000000e+00 989.0
49 TraesCS7D01G021200 chr7A 89.238 604 57 4 1528 2130 9328594 9329190 0.000000e+00 749.0
50 TraesCS7D01G021200 chr7A 79.757 247 29 16 1052 1282 9328170 9328411 5.680000e-35 159.0
51 TraesCS7D01G021200 chr7A 82.000 150 24 1 327 473 9336272 9336421 2.070000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G021200 chr7D 10033946 10039420 5474 False 10111.000000 10111 100.000000 1 5475 1 chr7D.!!$F2 5474
1 TraesCS7D01G021200 chr7D 10470377 10484029 13652 True 1499.800000 2763 84.520800 1045 5475 5 chr7D.!!$R1 4430
2 TraesCS7D01G021200 chr4A 729138493 729142776 4283 False 1757.000000 3362 90.188667 1239 5021 3 chr4A.!!$F6 3782
3 TraesCS7D01G021200 chr4A 729529221 729533149 3928 True 1125.000000 1219 85.067667 2167 5475 3 chr4A.!!$R7 3308
4 TraesCS7D01G021200 chr4A 729741729 729746843 5114 False 1079.666667 4172 91.749000 909 5475 6 chr4A.!!$F9 4566
5 TraesCS7D01G021200 chr4A 728428933 728434308 5375 True 1077.500000 2202 83.983500 1045 5475 4 chr4A.!!$R6 4430
6 TraesCS7D01G021200 chr4A 728457564 728458639 1075 True 1033.000000 1033 84.253000 1045 2130 1 chr4A.!!$R1 1085
7 TraesCS7D01G021200 chr4A 729083571 729084579 1008 True 1014.000000 1014 84.896000 3301 4307 1 chr4A.!!$R4 1006
8 TraesCS7D01G021200 chr4A 729857928 729865274 7346 False 993.750000 2189 85.262000 327 5475 4 chr4A.!!$F11 5148
9 TraesCS7D01G021200 chr4A 729706795 729707612 817 False 976.000000 976 88.264000 4661 5475 1 chr4A.!!$F4 814
10 TraesCS7D01G021200 chr4A 728831351 728832111 760 False 944.000000 944 89.108000 4717 5475 1 chr4A.!!$F2 758
11 TraesCS7D01G021200 chr4A 729680992 729684916 3924 False 847.666667 1070 85.892333 1575 4442 3 chr4A.!!$F7 2867
12 TraesCS7D01G021200 chr4A 729048936 729049717 781 True 708.000000 708 83.061000 2169 2962 1 chr4A.!!$R3 793
13 TraesCS7D01G021200 chr4A 718926759 718932252 5493 True 596.000000 950 88.298333 1058 5475 3 chr4A.!!$R5 4417
14 TraesCS7D01G021200 chr4A 729814143 729815754 1611 False 505.250000 917 83.393500 1527 3235 2 chr4A.!!$F10 1708
15 TraesCS7D01G021200 chr4A 729717603 729719480 1877 False 415.000000 804 92.271667 1 920 3 chr4A.!!$F8 919
16 TraesCS7D01G021200 chr7A 9328170 9336421 8251 False 620.000000 1079 84.777400 327 5475 5 chr7A.!!$F1 5148

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 452 0.108329 ACTCCGGTTTATGGTCTGCG 60.108 55.0 0.00 0.0 0.00 5.18 F
680 687 0.179032 TGGGCGAGTTCTTTCAGCAA 60.179 50.0 0.00 0.0 0.00 3.91 F
2161 2397 0.032815 GGTTCAGCCTATCTCTCCGC 59.967 60.0 0.00 0.0 0.00 5.54 F
2984 3912 0.450184 AAATCAATACGGCGGTGTGC 59.550 50.0 13.24 0.0 45.38 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2142 2378 0.032815 GCGGAGAGATAGGCTGAACC 59.967 60.000 0.00 0.0 39.61 3.62 R
2420 3315 0.969894 GCTAGCCTACATCGTCCCAT 59.030 55.000 2.29 0.0 0.00 4.00 R
3069 4032 1.272928 TGTCTGGCTCTCTGATGTCCT 60.273 52.381 0.00 0.0 0.00 3.85 R
4752 6960 4.153296 TGTTTGCACAGGTTACATCGTATG 59.847 41.667 0.00 0.0 0.00 2.39 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 6.204688 TGTTTCTGAACATTCGTTTAGATGCT 59.795 34.615 1.30 0.00 44.49 3.79
55 56 7.425606 ACATTCGTTTAGATGCTTGACTTTTT 58.574 30.769 0.00 0.00 0.00 1.94
62 63 9.175060 GTTTAGATGCTTGACTTTTTCTTCTTC 57.825 33.333 0.00 0.00 0.00 2.87
63 64 8.682936 TTAGATGCTTGACTTTTTCTTCTTCT 57.317 30.769 0.00 0.00 0.00 2.85
64 65 7.579761 AGATGCTTGACTTTTTCTTCTTCTT 57.420 32.000 0.00 0.00 0.00 2.52
65 66 8.005192 AGATGCTTGACTTTTTCTTCTTCTTT 57.995 30.769 0.00 0.00 0.00 2.52
66 67 8.473219 AGATGCTTGACTTTTTCTTCTTCTTTT 58.527 29.630 0.00 0.00 0.00 2.27
180 181 6.303839 TCTTTGGGAAGTAAACAGCATACTT 58.696 36.000 0.00 0.00 44.18 2.24
186 187 6.404734 GGGAAGTAAACAGCATACTTGAATGG 60.405 42.308 3.85 0.00 42.18 3.16
203 204 7.224557 ACTTGAATGGCAAAACAAAATCTGTAC 59.775 33.333 0.00 0.00 34.20 2.90
210 211 1.364269 ACAAAATCTGTACCCGGGGA 58.636 50.000 27.92 16.00 36.10 4.81
213 214 3.158676 CAAAATCTGTACCCGGGGAAAA 58.841 45.455 27.92 7.42 0.00 2.29
216 217 1.732117 TCTGTACCCGGGGAAAAAGA 58.268 50.000 27.92 17.54 0.00 2.52
225 226 3.135895 CCCGGGGAAAAAGAGAGCTTATA 59.864 47.826 14.71 0.00 32.98 0.98
228 229 5.368989 CGGGGAAAAAGAGAGCTTATACAT 58.631 41.667 0.00 0.00 32.98 2.29
249 250 5.247564 ACATGGTGTACCTAGTGTTGTACAT 59.752 40.000 11.36 0.00 46.30 2.29
281 282 1.273327 GTTTGGGGCATGAAGGTGAAG 59.727 52.381 0.00 0.00 0.00 3.02
287 288 1.734465 GGCATGAAGGTGAAGAAGTCG 59.266 52.381 0.00 0.00 0.00 4.18
293 294 4.482386 TGAAGGTGAAGAAGTCGAATACG 58.518 43.478 0.00 0.00 41.26 3.06
295 296 2.230508 AGGTGAAGAAGTCGAATACGCA 59.769 45.455 0.00 0.00 39.58 5.24
301 302 4.175787 AGAAGTCGAATACGCAAGAGTT 57.824 40.909 0.00 0.00 43.62 3.01
302 303 4.167268 AGAAGTCGAATACGCAAGAGTTC 58.833 43.478 0.00 4.29 41.09 3.01
310 311 5.744345 CGAATACGCAAGAGTTCTCAGTATT 59.256 40.000 15.28 15.28 43.62 1.89
352 353 2.089201 TGTGGAGATCATGACGTACGT 58.911 47.619 23.04 23.04 0.00 3.57
357 358 3.106672 GAGATCATGACGTACGTTGTCC 58.893 50.000 23.70 10.17 35.46 4.02
401 402 4.002906 TCCTGAAACTGCATCGTTAACT 57.997 40.909 3.71 0.00 0.00 2.24
414 415 4.345859 TCGTTAACTCAGTTGAATGGGT 57.654 40.909 0.00 0.00 34.56 4.51
438 439 4.573201 TGTTTTCACTTACTGAAACTCCGG 59.427 41.667 0.00 0.00 46.56 5.14
451 452 0.108329 ACTCCGGTTTATGGTCTGCG 60.108 55.000 0.00 0.00 0.00 5.18
470 471 0.951558 GTTGGATCACGGCAGTTTGT 59.048 50.000 0.00 0.00 0.00 2.83
473 474 2.422597 TGGATCACGGCAGTTTGTAAG 58.577 47.619 0.00 0.00 0.00 2.34
494 495 2.745821 GCATCTGCAACAATCACTCTCA 59.254 45.455 0.00 0.00 41.59 3.27
523 524 8.022550 CAGATGCATGTAACAGTTTTACATTCA 58.977 33.333 14.18 14.18 41.99 2.57
543 550 4.539726 TCATAAAGAGCTGGCCATTCATT 58.460 39.130 5.51 9.41 0.00 2.57
552 559 1.894466 TGGCCATTCATTTGTGTCTGG 59.106 47.619 0.00 0.00 0.00 3.86
569 576 1.538512 CTGGACATTTGCCACAGTGAG 59.461 52.381 0.62 0.00 0.00 3.51
576 583 1.699054 TTGCCACAGTGAGCAGAGGT 61.699 55.000 14.11 0.00 40.73 3.85
577 584 1.375268 GCCACAGTGAGCAGAGGTC 60.375 63.158 0.62 0.00 0.00 3.85
578 585 1.294780 CCACAGTGAGCAGAGGTCC 59.705 63.158 0.62 0.00 0.00 4.46
579 586 1.080230 CACAGTGAGCAGAGGTCCG 60.080 63.158 0.00 0.00 0.00 4.79
580 587 1.228583 ACAGTGAGCAGAGGTCCGA 60.229 57.895 0.00 0.00 0.00 4.55
581 588 0.827925 ACAGTGAGCAGAGGTCCGAA 60.828 55.000 0.00 0.00 0.00 4.30
582 589 0.534412 CAGTGAGCAGAGGTCCGAAT 59.466 55.000 0.00 0.00 0.00 3.34
583 590 0.820871 AGTGAGCAGAGGTCCGAATC 59.179 55.000 0.00 0.00 0.00 2.52
584 591 0.179097 GTGAGCAGAGGTCCGAATCC 60.179 60.000 0.00 0.00 0.00 3.01
585 592 1.330655 TGAGCAGAGGTCCGAATCCC 61.331 60.000 0.00 0.00 0.00 3.85
586 593 1.306141 AGCAGAGGTCCGAATCCCA 60.306 57.895 0.00 0.00 0.00 4.37
587 594 1.144936 GCAGAGGTCCGAATCCCAG 59.855 63.158 0.00 0.00 0.00 4.45
588 595 1.826024 CAGAGGTCCGAATCCCAGG 59.174 63.158 0.00 0.00 0.00 4.45
589 596 0.978146 CAGAGGTCCGAATCCCAGGT 60.978 60.000 0.00 0.00 0.00 4.00
590 597 0.635009 AGAGGTCCGAATCCCAGGTA 59.365 55.000 0.00 0.00 0.00 3.08
591 598 0.751452 GAGGTCCGAATCCCAGGTAC 59.249 60.000 0.00 0.00 0.00 3.34
592 599 0.338814 AGGTCCGAATCCCAGGTACT 59.661 55.000 0.00 0.00 43.88 2.73
593 600 1.572415 AGGTCCGAATCCCAGGTACTA 59.428 52.381 0.00 0.00 36.02 1.82
594 601 1.962100 GGTCCGAATCCCAGGTACTAG 59.038 57.143 0.00 0.00 36.02 2.57
595 602 2.664015 GTCCGAATCCCAGGTACTAGT 58.336 52.381 0.00 0.00 36.02 2.57
596 603 3.435601 GGTCCGAATCCCAGGTACTAGTA 60.436 52.174 0.00 0.00 36.02 1.82
597 604 4.405548 GTCCGAATCCCAGGTACTAGTAT 58.594 47.826 5.75 0.00 36.02 2.12
598 605 4.458642 GTCCGAATCCCAGGTACTAGTATC 59.541 50.000 5.75 5.31 36.02 2.24
599 606 4.105217 TCCGAATCCCAGGTACTAGTATCA 59.895 45.833 15.51 0.00 36.02 2.15
600 607 5.017490 CCGAATCCCAGGTACTAGTATCAT 58.983 45.833 15.51 0.00 36.02 2.45
601 608 6.012245 TCCGAATCCCAGGTACTAGTATCATA 60.012 42.308 15.51 0.00 36.02 2.15
602 609 6.662234 CCGAATCCCAGGTACTAGTATCATAA 59.338 42.308 15.51 0.00 36.02 1.90
603 610 7.362747 CCGAATCCCAGGTACTAGTATCATAAC 60.363 44.444 15.51 0.00 36.02 1.89
604 611 7.463961 AATCCCAGGTACTAGTATCATAACG 57.536 40.000 15.51 0.00 36.02 3.18
605 612 5.945310 TCCCAGGTACTAGTATCATAACGT 58.055 41.667 15.51 0.00 36.02 3.99
606 613 7.078249 TCCCAGGTACTAGTATCATAACGTA 57.922 40.000 15.51 0.00 36.02 3.57
607 614 7.517320 TCCCAGGTACTAGTATCATAACGTAA 58.483 38.462 15.51 0.00 36.02 3.18
608 615 8.166061 TCCCAGGTACTAGTATCATAACGTAAT 58.834 37.037 15.51 0.00 36.02 1.89
609 616 8.800332 CCCAGGTACTAGTATCATAACGTAATT 58.200 37.037 15.51 0.00 36.02 1.40
610 617 9.837525 CCAGGTACTAGTATCATAACGTAATTC 57.162 37.037 15.51 0.00 36.02 2.17
619 626 9.627395 AGTATCATAACGTAATTCAGATAGTGC 57.373 33.333 0.00 0.00 0.00 4.40
620 627 7.891183 ATCATAACGTAATTCAGATAGTGCC 57.109 36.000 0.00 0.00 0.00 5.01
621 628 6.811954 TCATAACGTAATTCAGATAGTGCCA 58.188 36.000 0.00 0.00 0.00 4.92
622 629 6.923508 TCATAACGTAATTCAGATAGTGCCAG 59.076 38.462 0.00 0.00 0.00 4.85
623 630 4.737855 ACGTAATTCAGATAGTGCCAGT 57.262 40.909 0.00 0.00 0.00 4.00
624 631 4.433615 ACGTAATTCAGATAGTGCCAGTG 58.566 43.478 0.00 0.00 0.00 3.66
625 632 4.159693 ACGTAATTCAGATAGTGCCAGTGA 59.840 41.667 0.00 0.00 0.00 3.41
626 633 4.742167 CGTAATTCAGATAGTGCCAGTGAG 59.258 45.833 0.00 0.00 0.00 3.51
627 634 4.833478 AATTCAGATAGTGCCAGTGAGT 57.167 40.909 0.00 0.00 0.00 3.41
628 635 3.876274 TTCAGATAGTGCCAGTGAGTC 57.124 47.619 0.00 0.00 0.00 3.36
629 636 3.093057 TCAGATAGTGCCAGTGAGTCT 57.907 47.619 0.00 0.00 0.00 3.24
630 637 4.236527 TCAGATAGTGCCAGTGAGTCTA 57.763 45.455 0.00 0.00 0.00 2.59
631 638 4.797743 TCAGATAGTGCCAGTGAGTCTAT 58.202 43.478 0.00 0.00 0.00 1.98
632 639 5.941788 TCAGATAGTGCCAGTGAGTCTATA 58.058 41.667 0.00 0.00 0.00 1.31
633 640 6.547402 TCAGATAGTGCCAGTGAGTCTATAT 58.453 40.000 0.00 0.00 0.00 0.86
634 641 7.007116 TCAGATAGTGCCAGTGAGTCTATATT 58.993 38.462 0.00 0.00 0.00 1.28
635 642 7.507277 TCAGATAGTGCCAGTGAGTCTATATTT 59.493 37.037 0.00 0.00 0.00 1.40
636 643 8.147058 CAGATAGTGCCAGTGAGTCTATATTTT 58.853 37.037 0.00 0.00 0.00 1.82
637 644 8.147058 AGATAGTGCCAGTGAGTCTATATTTTG 58.853 37.037 0.00 0.00 0.00 2.44
638 645 5.431765 AGTGCCAGTGAGTCTATATTTTGG 58.568 41.667 0.00 0.00 0.00 3.28
639 646 4.820284 GCCAGTGAGTCTATATTTTGGC 57.180 45.455 0.00 0.00 42.45 4.52
640 647 4.199310 GCCAGTGAGTCTATATTTTGGCA 58.801 43.478 7.25 0.00 46.82 4.92
641 648 4.640201 GCCAGTGAGTCTATATTTTGGCAA 59.360 41.667 7.25 0.00 46.82 4.52
642 649 5.125417 GCCAGTGAGTCTATATTTTGGCAAA 59.875 40.000 8.93 8.93 46.82 3.68
643 650 6.350110 GCCAGTGAGTCTATATTTTGGCAAAA 60.350 38.462 25.94 25.94 46.82 2.44
644 651 7.029563 CCAGTGAGTCTATATTTTGGCAAAAC 58.970 38.462 26.23 13.98 32.37 2.43
645 652 7.309133 CCAGTGAGTCTATATTTTGGCAAAACA 60.309 37.037 26.23 16.94 32.37 2.83
646 653 7.752239 CAGTGAGTCTATATTTTGGCAAAACAG 59.248 37.037 26.23 21.31 32.37 3.16
647 654 7.665559 AGTGAGTCTATATTTTGGCAAAACAGA 59.334 33.333 26.23 22.91 32.37 3.41
648 655 7.750903 GTGAGTCTATATTTTGGCAAAACAGAC 59.249 37.037 31.81 31.81 37.33 3.51
649 656 7.446931 TGAGTCTATATTTTGGCAAAACAGACA 59.553 33.333 35.32 25.30 38.35 3.41
650 657 8.353423 AGTCTATATTTTGGCAAAACAGACAT 57.647 30.769 35.32 26.53 38.35 3.06
651 658 9.461312 AGTCTATATTTTGGCAAAACAGACATA 57.539 29.630 35.32 23.68 38.35 2.29
652 659 9.722056 GTCTATATTTTGGCAAAACAGACATAG 57.278 33.333 32.73 26.60 37.19 2.23
653 660 9.461312 TCTATATTTTGGCAAAACAGACATAGT 57.539 29.630 26.23 10.67 32.37 2.12
660 667 7.477144 TGGCAAAACAGACATAGTATATTCG 57.523 36.000 0.00 0.00 0.00 3.34
661 668 7.045416 TGGCAAAACAGACATAGTATATTCGT 58.955 34.615 0.00 0.00 0.00 3.85
662 669 7.011016 TGGCAAAACAGACATAGTATATTCGTG 59.989 37.037 0.00 0.00 0.00 4.35
663 670 7.345192 GCAAAACAGACATAGTATATTCGTGG 58.655 38.462 0.00 0.00 0.00 4.94
664 671 7.518370 GCAAAACAGACATAGTATATTCGTGGG 60.518 40.741 0.00 0.00 0.00 4.61
665 672 5.135508 ACAGACATAGTATATTCGTGGGC 57.864 43.478 0.00 0.00 0.00 5.36
666 673 4.166523 CAGACATAGTATATTCGTGGGCG 58.833 47.826 0.00 0.00 39.92 6.13
667 674 4.077108 AGACATAGTATATTCGTGGGCGA 58.923 43.478 0.00 0.00 46.36 5.54
675 682 4.667420 TCGTGGGCGAGTTCTTTC 57.333 55.556 0.00 0.00 42.81 2.62
676 683 1.743391 TCGTGGGCGAGTTCTTTCA 59.257 52.632 0.00 0.00 42.81 2.69
677 684 0.319555 TCGTGGGCGAGTTCTTTCAG 60.320 55.000 0.00 0.00 42.81 3.02
678 685 1.869690 GTGGGCGAGTTCTTTCAGC 59.130 57.895 0.00 0.00 0.00 4.26
679 686 0.884704 GTGGGCGAGTTCTTTCAGCA 60.885 55.000 0.00 0.00 0.00 4.41
680 687 0.179032 TGGGCGAGTTCTTTCAGCAA 60.179 50.000 0.00 0.00 0.00 3.91
681 688 0.951558 GGGCGAGTTCTTTCAGCAAA 59.048 50.000 0.00 0.00 0.00 3.68
682 689 1.541588 GGGCGAGTTCTTTCAGCAAAT 59.458 47.619 0.00 0.00 0.00 2.32
683 690 2.414691 GGGCGAGTTCTTTCAGCAAATC 60.415 50.000 0.00 0.00 0.00 2.17
684 691 2.226437 GGCGAGTTCTTTCAGCAAATCA 59.774 45.455 0.00 0.00 0.00 2.57
685 692 3.304659 GGCGAGTTCTTTCAGCAAATCAA 60.305 43.478 0.00 0.00 0.00 2.57
686 693 4.290155 GCGAGTTCTTTCAGCAAATCAAA 58.710 39.130 0.00 0.00 0.00 2.69
687 694 4.919754 GCGAGTTCTTTCAGCAAATCAAAT 59.080 37.500 0.00 0.00 0.00 2.32
688 695 6.086222 GCGAGTTCTTTCAGCAAATCAAATA 58.914 36.000 0.00 0.00 0.00 1.40
689 696 6.749118 GCGAGTTCTTTCAGCAAATCAAATAT 59.251 34.615 0.00 0.00 0.00 1.28
690 697 7.274250 GCGAGTTCTTTCAGCAAATCAAATATT 59.726 33.333 0.00 0.00 0.00 1.28
691 698 9.132521 CGAGTTCTTTCAGCAAATCAAATATTT 57.867 29.630 0.00 0.00 0.00 1.40
693 700 9.428097 AGTTCTTTCAGCAAATCAAATATTTCC 57.572 29.630 0.00 0.00 0.00 3.13
694 701 9.428097 GTTCTTTCAGCAAATCAAATATTTCCT 57.572 29.630 0.00 0.00 0.00 3.36
695 702 8.991243 TCTTTCAGCAAATCAAATATTTCCTG 57.009 30.769 0.00 0.00 30.22 3.86
696 703 8.587608 TCTTTCAGCAAATCAAATATTTCCTGT 58.412 29.630 0.00 0.00 30.86 4.00
697 704 9.211485 CTTTCAGCAAATCAAATATTTCCTGTT 57.789 29.630 0.00 0.00 30.86 3.16
762 769 5.959583 ATCCTCCTTTTCTAGTTGTAGGG 57.040 43.478 0.00 0.00 0.00 3.53
763 770 4.759953 TCCTCCTTTTCTAGTTGTAGGGT 58.240 43.478 0.00 0.00 0.00 4.34
764 771 4.530946 TCCTCCTTTTCTAGTTGTAGGGTG 59.469 45.833 0.00 0.00 0.00 4.61
765 772 4.323562 CCTCCTTTTCTAGTTGTAGGGTGG 60.324 50.000 0.00 0.00 0.00 4.61
766 773 4.495565 TCCTTTTCTAGTTGTAGGGTGGA 58.504 43.478 0.00 0.00 0.00 4.02
767 774 5.098663 TCCTTTTCTAGTTGTAGGGTGGAT 58.901 41.667 0.00 0.00 0.00 3.41
768 775 6.266080 TCCTTTTCTAGTTGTAGGGTGGATA 58.734 40.000 0.00 0.00 0.00 2.59
769 776 6.906901 TCCTTTTCTAGTTGTAGGGTGGATAT 59.093 38.462 0.00 0.00 0.00 1.63
770 777 7.404980 TCCTTTTCTAGTTGTAGGGTGGATATT 59.595 37.037 0.00 0.00 0.00 1.28
771 778 7.499232 CCTTTTCTAGTTGTAGGGTGGATATTG 59.501 40.741 0.00 0.00 0.00 1.90
772 779 5.546621 TCTAGTTGTAGGGTGGATATTGC 57.453 43.478 0.00 0.00 0.00 3.56
773 780 5.216622 TCTAGTTGTAGGGTGGATATTGCT 58.783 41.667 0.00 0.00 0.00 3.91
774 781 4.862641 AGTTGTAGGGTGGATATTGCTT 57.137 40.909 0.00 0.00 0.00 3.91
775 782 5.193099 AGTTGTAGGGTGGATATTGCTTT 57.807 39.130 0.00 0.00 0.00 3.51
776 783 4.949856 AGTTGTAGGGTGGATATTGCTTTG 59.050 41.667 0.00 0.00 0.00 2.77
777 784 4.853468 TGTAGGGTGGATATTGCTTTGA 57.147 40.909 0.00 0.00 0.00 2.69
778 785 5.186256 TGTAGGGTGGATATTGCTTTGAA 57.814 39.130 0.00 0.00 0.00 2.69
779 786 5.575157 TGTAGGGTGGATATTGCTTTGAAA 58.425 37.500 0.00 0.00 0.00 2.69
780 787 6.013379 TGTAGGGTGGATATTGCTTTGAAAA 58.987 36.000 0.00 0.00 0.00 2.29
781 788 5.665916 AGGGTGGATATTGCTTTGAAAAG 57.334 39.130 0.00 0.00 39.03 2.27
798 805 8.721019 TTTGAAAAGCAAAGAATCAATTGAGT 57.279 26.923 14.54 11.65 41.37 3.41
799 806 7.935338 TGAAAAGCAAAGAATCAATTGAGTC 57.065 32.000 24.63 24.63 39.24 3.36
800 807 6.925165 TGAAAAGCAAAGAATCAATTGAGTCC 59.075 34.615 27.35 14.92 39.73 3.85
801 808 6.409524 AAAGCAAAGAATCAATTGAGTCCA 57.590 33.333 27.35 0.00 39.73 4.02
802 809 6.409524 AAGCAAAGAATCAATTGAGTCCAA 57.590 33.333 27.35 0.00 39.73 3.53
803 810 6.022163 AGCAAAGAATCAATTGAGTCCAAG 57.978 37.500 27.35 19.05 39.73 3.61
804 811 4.624452 GCAAAGAATCAATTGAGTCCAAGC 59.376 41.667 27.35 23.47 39.73 4.01
805 812 5.166398 CAAAGAATCAATTGAGTCCAAGCC 58.834 41.667 27.35 7.04 39.73 4.35
806 813 3.012518 AGAATCAATTGAGTCCAAGCCG 58.987 45.455 27.35 0.00 39.73 5.52
807 814 1.755179 ATCAATTGAGTCCAAGCCGG 58.245 50.000 14.54 0.00 35.48 6.13
808 815 0.322456 TCAATTGAGTCCAAGCCGGG 60.322 55.000 3.38 0.00 35.48 5.73
809 816 0.322456 CAATTGAGTCCAAGCCGGGA 60.322 55.000 2.18 0.00 35.48 5.14
810 817 0.625849 AATTGAGTCCAAGCCGGGAT 59.374 50.000 2.18 0.00 39.62 3.85
811 818 0.625849 ATTGAGTCCAAGCCGGGATT 59.374 50.000 2.18 0.00 39.62 3.01
812 819 1.281419 TTGAGTCCAAGCCGGGATTA 58.719 50.000 2.18 0.00 39.62 1.75
813 820 1.507140 TGAGTCCAAGCCGGGATTAT 58.493 50.000 2.18 0.00 39.62 1.28
814 821 2.684943 TGAGTCCAAGCCGGGATTATA 58.315 47.619 2.18 0.00 39.62 0.98
815 822 3.248024 TGAGTCCAAGCCGGGATTATAT 58.752 45.455 2.18 0.00 39.62 0.86
816 823 4.422057 TGAGTCCAAGCCGGGATTATATA 58.578 43.478 2.18 0.00 39.62 0.86
817 824 5.030147 TGAGTCCAAGCCGGGATTATATAT 58.970 41.667 2.18 0.00 39.62 0.86
818 825 5.487488 TGAGTCCAAGCCGGGATTATATATT 59.513 40.000 2.18 0.00 39.62 1.28
819 826 5.990668 AGTCCAAGCCGGGATTATATATTC 58.009 41.667 2.18 0.00 39.62 1.75
820 827 5.726793 AGTCCAAGCCGGGATTATATATTCT 59.273 40.000 2.18 0.00 39.62 2.40
821 828 6.215636 AGTCCAAGCCGGGATTATATATTCTT 59.784 38.462 2.18 0.00 39.62 2.52
822 829 6.884836 GTCCAAGCCGGGATTATATATTCTTT 59.115 38.462 2.18 0.00 39.62 2.52
823 830 7.393515 GTCCAAGCCGGGATTATATATTCTTTT 59.606 37.037 2.18 0.00 39.62 2.27
824 831 8.607713 TCCAAGCCGGGATTATATATTCTTTTA 58.392 33.333 2.18 0.00 34.36 1.52
825 832 8.893727 CCAAGCCGGGATTATATATTCTTTTAG 58.106 37.037 2.18 0.00 0.00 1.85
826 833 8.893727 CAAGCCGGGATTATATATTCTTTTAGG 58.106 37.037 2.18 3.73 0.00 2.69
827 834 8.388656 AGCCGGGATTATATATTCTTTTAGGA 57.611 34.615 2.18 0.00 0.00 2.94
828 835 8.832735 AGCCGGGATTATATATTCTTTTAGGAA 58.167 33.333 2.18 0.00 0.00 3.36
829 836 9.457436 GCCGGGATTATATATTCTTTTAGGAAA 57.543 33.333 2.18 0.00 0.00 3.13
839 846 8.687292 ATATTCTTTTAGGAAACCCGGATTAC 57.313 34.615 0.73 0.00 0.00 1.89
840 847 5.767277 TCTTTTAGGAAACCCGGATTACT 57.233 39.130 0.73 6.46 0.00 2.24
841 848 5.493809 TCTTTTAGGAAACCCGGATTACTG 58.506 41.667 0.73 0.00 0.00 2.74
842 849 4.914177 TTTAGGAAACCCGGATTACTGT 57.086 40.909 0.73 0.00 0.00 3.55
843 850 4.914177 TTAGGAAACCCGGATTACTGTT 57.086 40.909 0.73 0.00 0.00 3.16
844 851 3.067684 AGGAAACCCGGATTACTGTTG 57.932 47.619 0.73 0.00 0.00 3.33
845 852 2.089201 GGAAACCCGGATTACTGTTGG 58.911 52.381 0.73 0.00 0.00 3.77
846 853 2.553685 GGAAACCCGGATTACTGTTGGT 60.554 50.000 0.73 0.00 0.00 3.67
847 854 2.963599 AACCCGGATTACTGTTGGTT 57.036 45.000 0.73 0.00 0.00 3.67
848 855 2.963599 ACCCGGATTACTGTTGGTTT 57.036 45.000 0.73 0.00 0.00 3.27
849 856 4.370094 AACCCGGATTACTGTTGGTTTA 57.630 40.909 0.73 0.00 32.37 2.01
850 857 4.370094 ACCCGGATTACTGTTGGTTTAA 57.630 40.909 0.73 0.00 0.00 1.52
851 858 4.727677 ACCCGGATTACTGTTGGTTTAAA 58.272 39.130 0.73 0.00 0.00 1.52
852 859 4.763279 ACCCGGATTACTGTTGGTTTAAAG 59.237 41.667 0.73 0.00 0.00 1.85
853 860 4.157105 CCCGGATTACTGTTGGTTTAAAGG 59.843 45.833 0.73 0.00 0.00 3.11
854 861 4.763279 CCGGATTACTGTTGGTTTAAAGGT 59.237 41.667 0.00 0.00 0.00 3.50
855 862 5.335348 CCGGATTACTGTTGGTTTAAAGGTG 60.335 44.000 0.00 0.00 0.00 4.00
856 863 5.239963 CGGATTACTGTTGGTTTAAAGGTGT 59.760 40.000 0.00 0.00 0.00 4.16
857 864 6.238814 CGGATTACTGTTGGTTTAAAGGTGTT 60.239 38.462 0.00 0.00 0.00 3.32
858 865 6.921307 GGATTACTGTTGGTTTAAAGGTGTTG 59.079 38.462 0.00 0.00 0.00 3.33
859 866 4.729227 ACTGTTGGTTTAAAGGTGTTGG 57.271 40.909 0.00 0.00 0.00 3.77
860 867 4.090819 ACTGTTGGTTTAAAGGTGTTGGT 58.909 39.130 0.00 0.00 0.00 3.67
861 868 5.262804 ACTGTTGGTTTAAAGGTGTTGGTA 58.737 37.500 0.00 0.00 0.00 3.25
862 869 5.715753 ACTGTTGGTTTAAAGGTGTTGGTAA 59.284 36.000 0.00 0.00 0.00 2.85
863 870 6.381707 ACTGTTGGTTTAAAGGTGTTGGTAAT 59.618 34.615 0.00 0.00 0.00 1.89
864 871 7.093245 ACTGTTGGTTTAAAGGTGTTGGTAATT 60.093 33.333 0.00 0.00 0.00 1.40
865 872 8.302515 TGTTGGTTTAAAGGTGTTGGTAATTA 57.697 30.769 0.00 0.00 0.00 1.40
866 873 8.925338 TGTTGGTTTAAAGGTGTTGGTAATTAT 58.075 29.630 0.00 0.00 0.00 1.28
867 874 9.767228 GTTGGTTTAAAGGTGTTGGTAATTATT 57.233 29.630 0.00 0.00 0.00 1.40
869 876 9.765795 TGGTTTAAAGGTGTTGGTAATTATTTG 57.234 29.630 0.00 0.00 0.00 2.32
870 877 9.984190 GGTTTAAAGGTGTTGGTAATTATTTGA 57.016 29.630 0.00 0.00 0.00 2.69
893 900 9.635520 TTGAAAACTAGTAGTAGTAAGATGCAC 57.364 33.333 10.68 0.00 38.66 4.57
894 901 8.248945 TGAAAACTAGTAGTAGTAAGATGCACC 58.751 37.037 10.68 0.00 38.66 5.01
895 902 6.712179 AACTAGTAGTAGTAAGATGCACCC 57.288 41.667 10.68 0.00 38.66 4.61
896 903 4.820716 ACTAGTAGTAGTAAGATGCACCCG 59.179 45.833 8.55 0.00 37.76 5.28
897 904 2.957006 AGTAGTAGTAAGATGCACCCGG 59.043 50.000 0.00 0.00 0.00 5.73
898 905 2.154567 AGTAGTAAGATGCACCCGGA 57.845 50.000 0.73 0.00 0.00 5.14
899 906 2.032620 AGTAGTAAGATGCACCCGGAG 58.967 52.381 0.73 0.00 0.00 4.63
900 907 2.029623 GTAGTAAGATGCACCCGGAGA 58.970 52.381 0.73 0.00 0.00 3.71
901 908 0.824759 AGTAAGATGCACCCGGAGAC 59.175 55.000 0.73 0.00 0.00 3.36
961 1057 1.657751 GCGGATGTGAAGCCTTTCCC 61.658 60.000 0.00 0.00 32.09 3.97
982 1078 3.074369 TCCGCATTCCGCCTCTCA 61.074 61.111 0.00 0.00 37.30 3.27
1012 1108 1.112950 CTCCCCGGAAGTACTTCTCC 58.887 60.000 29.66 17.66 39.45 3.71
1018 1114 0.529378 GGAAGTACTTCTCCGGCGAA 59.471 55.000 29.66 6.71 39.45 4.70
1025 1141 1.096416 CTTCTCCGGCGAAGTACTCT 58.904 55.000 23.30 0.00 36.50 3.24
1041 1157 2.885616 ACTCTTCCCGTCAGGTTCTTA 58.114 47.619 0.00 0.00 36.75 2.10
1043 1159 3.447944 ACTCTTCCCGTCAGGTTCTTATC 59.552 47.826 0.00 0.00 36.75 1.75
1049 1180 2.224305 CCGTCAGGTTCTTATCCATCCC 60.224 54.545 0.00 0.00 0.00 3.85
1123 1263 4.047166 AGATGGTGATAAATGGGGACTCA 58.953 43.478 0.00 0.00 0.00 3.41
1228 1391 2.238646 TGGTTGCTCACTAATACAGGGG 59.761 50.000 0.00 0.00 0.00 4.79
1232 1395 3.186283 TGCTCACTAATACAGGGGGAAA 58.814 45.455 0.00 0.00 23.33 3.13
1235 1398 4.200092 CTCACTAATACAGGGGGAAAAGC 58.800 47.826 0.00 0.00 23.33 3.51
1236 1399 3.053917 TCACTAATACAGGGGGAAAAGCC 60.054 47.826 0.00 0.00 0.00 4.35
1287 1457 6.261158 TCAGATCGACGTCTCTTTCAGATATT 59.739 38.462 14.70 0.00 32.08 1.28
1288 1458 6.359352 CAGATCGACGTCTCTTTCAGATATTG 59.641 42.308 14.70 5.69 32.08 1.90
1289 1459 5.562506 TCGACGTCTCTTTCAGATATTGT 57.437 39.130 14.70 0.00 32.08 2.71
1290 1460 5.950883 TCGACGTCTCTTTCAGATATTGTT 58.049 37.500 14.70 0.00 32.08 2.83
1291 1461 6.387465 TCGACGTCTCTTTCAGATATTGTTT 58.613 36.000 14.70 0.00 32.08 2.83
1292 1462 6.527023 TCGACGTCTCTTTCAGATATTGTTTC 59.473 38.462 14.70 0.00 32.08 2.78
1293 1463 6.308041 CGACGTCTCTTTCAGATATTGTTTCA 59.692 38.462 14.70 0.00 32.08 2.69
1294 1464 7.352719 ACGTCTCTTTCAGATATTGTTTCAC 57.647 36.000 0.00 0.00 32.08 3.18
1295 1465 6.929049 ACGTCTCTTTCAGATATTGTTTCACA 59.071 34.615 0.00 0.00 32.08 3.58
1296 1466 7.604164 ACGTCTCTTTCAGATATTGTTTCACAT 59.396 33.333 0.00 0.00 32.08 3.21
1297 1467 9.087424 CGTCTCTTTCAGATATTGTTTCACATA 57.913 33.333 0.00 0.00 32.08 2.29
1357 1567 1.275666 TCGAGAGAAAAGGCCCATCA 58.724 50.000 0.00 0.00 37.03 3.07
1395 1619 8.091449 ACTTTTTAGATCGACTTCAGACTTCAT 58.909 33.333 0.00 0.00 0.00 2.57
1446 1677 4.262420 GCTAGTTCTTCAATTGCCCCAAAA 60.262 41.667 0.00 0.00 0.00 2.44
1447 1678 4.769345 AGTTCTTCAATTGCCCCAAAAA 57.231 36.364 0.00 0.00 0.00 1.94
1488 1721 3.869065 TCAGTCGACTTTTTGAACCTGT 58.131 40.909 17.26 0.00 0.00 4.00
1522 1755 5.925509 GGCAACTGAATAATAGTAGGTCCA 58.074 41.667 0.00 0.00 0.00 4.02
1534 1767 9.725206 ATAATAGTAGGTCCAAGTTTTCTCCTA 57.275 33.333 0.00 0.00 0.00 2.94
1540 1773 6.610830 AGGTCCAAGTTTTCTCCTAATTTGA 58.389 36.000 0.00 0.00 0.00 2.69
1544 1777 6.016610 TCCAAGTTTTCTCCTAATTTGAACGG 60.017 38.462 0.00 0.00 0.00 4.44
1785 2021 2.095415 CGGTTTACAAGGTAAGCAAGCC 60.095 50.000 5.55 0.00 0.00 4.35
1901 2137 3.594134 CCGTGAAGAAGCTCTTTGAGAT 58.406 45.455 0.00 0.00 36.73 2.75
1926 2162 4.911390 ACGAGATCCTGGACAAGAATTTT 58.089 39.130 0.00 0.00 0.00 1.82
1950 2186 1.374758 CGAGGTCACCTGTCTTGCC 60.375 63.158 0.00 0.00 31.76 4.52
2107 2343 1.474143 GGTGCCTTGCTGACTATCTCC 60.474 57.143 0.00 0.00 0.00 3.71
2109 2345 1.127343 GCCTTGCTGACTATCTCCCT 58.873 55.000 0.00 0.00 0.00 4.20
2123 2359 7.015682 TGACTATCTCCCTGGTAAAATCAGATC 59.984 40.741 0.00 0.00 34.36 2.75
2130 2366 4.952335 CCTGGTAAAATCAGATCAGCCTTT 59.048 41.667 0.00 0.00 34.36 3.11
2132 2368 6.271488 TGGTAAAATCAGATCAGCCTTTTG 57.729 37.500 0.00 0.00 0.00 2.44
2133 2369 6.009589 TGGTAAAATCAGATCAGCCTTTTGA 58.990 36.000 0.00 0.00 0.00 2.69
2134 2370 6.151648 TGGTAAAATCAGATCAGCCTTTTGAG 59.848 38.462 0.00 0.00 0.00 3.02
2135 2371 4.715527 AAATCAGATCAGCCTTTTGAGC 57.284 40.909 0.00 0.00 33.80 4.26
2138 2374 3.079578 TCAGATCAGCCTTTTGAGCTTG 58.920 45.455 0.00 0.00 40.69 4.01
2139 2375 2.163815 CAGATCAGCCTTTTGAGCTTGG 59.836 50.000 0.00 0.00 40.69 3.61
2140 2376 1.475682 GATCAGCCTTTTGAGCTTGGG 59.524 52.381 0.00 0.00 38.95 4.12
2142 2378 0.316204 CAGCCTTTTGAGCTTGGGTG 59.684 55.000 0.00 0.00 38.95 4.61
2144 2380 1.115326 GCCTTTTGAGCTTGGGTGGT 61.115 55.000 0.00 0.00 0.00 4.16
2145 2381 1.413118 CCTTTTGAGCTTGGGTGGTT 58.587 50.000 0.00 0.00 0.00 3.67
2146 2382 1.341209 CCTTTTGAGCTTGGGTGGTTC 59.659 52.381 0.00 0.00 0.00 3.62
2147 2383 2.031120 CTTTTGAGCTTGGGTGGTTCA 58.969 47.619 0.00 0.00 0.00 3.18
2148 2384 1.691196 TTTGAGCTTGGGTGGTTCAG 58.309 50.000 0.00 0.00 0.00 3.02
2158 2394 2.900716 GGTGGTTCAGCCTATCTCTC 57.099 55.000 0.00 0.00 38.35 3.20
2159 2395 1.414550 GGTGGTTCAGCCTATCTCTCC 59.585 57.143 0.00 0.00 38.35 3.71
2160 2396 1.067821 GTGGTTCAGCCTATCTCTCCG 59.932 57.143 0.00 0.00 38.35 4.63
2161 2397 0.032815 GGTTCAGCCTATCTCTCCGC 59.967 60.000 0.00 0.00 0.00 5.54
2162 2398 0.747255 GTTCAGCCTATCTCTCCGCA 59.253 55.000 0.00 0.00 0.00 5.69
2165 2401 3.093057 TCAGCCTATCTCTCCGCATAT 57.907 47.619 0.00 0.00 0.00 1.78
2173 3068 7.609918 AGCCTATCTCTCCGCATATATATAGTG 59.390 40.741 0.00 0.00 0.00 2.74
2212 3107 5.911752 ACTTAATACTCTCCACAGATGCAG 58.088 41.667 0.00 0.00 0.00 4.41
2221 3116 1.366679 CACAGATGCAGCTTGTCGAT 58.633 50.000 0.00 0.00 0.00 3.59
2231 3126 3.005554 CAGCTTGTCGATTTCAGTGGAT 58.994 45.455 0.00 0.00 0.00 3.41
2257 3152 5.592688 ACACGTTATCAAATAATCAAGGGGG 59.407 40.000 0.00 0.00 0.00 5.40
2265 3160 4.946160 AATAATCAAGGGGGTCTGTGAA 57.054 40.909 0.00 0.00 0.00 3.18
2271 3166 2.358737 GGGGTCTGTGAAGGCGTG 60.359 66.667 0.00 0.00 0.00 5.34
2284 3179 2.401583 AGGCGTGCATTATCTTCACA 57.598 45.000 0.00 0.00 0.00 3.58
2337 3232 6.821388 ACCTCAGAATGTACTATTGGATGAC 58.179 40.000 0.00 0.00 37.40 3.06
2344 3239 6.624352 ATGTACTATTGGATGACAACATGC 57.376 37.500 0.00 0.00 42.94 4.06
2350 3245 1.430632 GATGACAACATGCTGCCCG 59.569 57.895 0.00 0.00 36.82 6.13
2356 3251 1.102154 CAACATGCTGCCCGGAATTA 58.898 50.000 0.73 0.00 0.00 1.40
2374 3269 5.987347 GGAATTACGGATTTCGGTCTATCAA 59.013 40.000 0.00 0.00 44.45 2.57
2406 3301 2.205911 GAAAGCAAGAGTCGGGCTATC 58.794 52.381 11.26 0.00 36.76 2.08
2420 3315 2.819608 GGGCTATCACTGAAAACAAGCA 59.180 45.455 0.00 0.00 0.00 3.91
2472 3369 8.801715 TTTGAGAACTTGATGTTTTTATCAGC 57.198 30.769 0.00 0.00 39.30 4.26
2489 3389 3.674997 TCAGCCATCTACCAACTTTGTC 58.325 45.455 0.00 0.00 0.00 3.18
2511 3412 8.487313 TGTCGCATACACTTTATTCACTAATT 57.513 30.769 0.00 0.00 31.43 1.40
2513 3414 8.388103 GTCGCATACACTTTATTCACTAATTGT 58.612 33.333 0.00 0.00 0.00 2.71
2525 3426 6.935741 TTCACTAATTGTACAAACTGCACT 57.064 33.333 13.23 0.00 0.00 4.40
2561 3464 5.555542 AGGGGATATATGGCACCAGAATTTA 59.444 40.000 0.00 0.00 0.00 1.40
2608 3511 8.547481 TCAAGACAGACATATATAGTTTGGGA 57.453 34.615 9.19 0.00 0.00 4.37
2700 3607 5.010012 ACATGAGGTTCCAAGAAACAACATC 59.990 40.000 0.00 0.00 32.68 3.06
2713 3623 6.615088 AGAAACAACATCATAGACAACATGC 58.385 36.000 0.00 0.00 0.00 4.06
2726 3636 2.958355 ACAACATGCTTAGCACAAACCT 59.042 40.909 9.82 0.00 43.04 3.50
2731 3641 5.009631 ACATGCTTAGCACAAACCTCAATA 58.990 37.500 9.82 0.00 43.04 1.90
2742 3653 6.144402 GCACAAACCTCAATATTGTTGAACAG 59.856 38.462 18.32 7.72 35.22 3.16
2773 3686 9.229784 GCAACACATATTCAATCAGAGTATTTG 57.770 33.333 0.00 0.00 34.56 2.32
2774 3687 9.726232 CAACACATATTCAATCAGAGTATTTGG 57.274 33.333 0.00 0.00 33.40 3.28
2830 3743 7.864686 TGAATGTTGTCTTTGTACTGATCTTG 58.135 34.615 0.00 0.00 0.00 3.02
2834 3754 5.929697 TGTCTTTGTACTGATCTTGCAAG 57.070 39.130 20.81 20.81 0.00 4.01
2838 3762 6.853362 GTCTTTGTACTGATCTTGCAAGAAAC 59.147 38.462 31.55 25.91 38.77 2.78
2856 3780 8.635983 GCAAGAAACGTAAAATAAAGATGGTTC 58.364 33.333 0.00 0.00 0.00 3.62
2878 3803 7.335422 GGTTCTGATTTCTGAGTCATTATGTGT 59.665 37.037 0.00 0.00 0.00 3.72
2879 3804 7.838771 TCTGATTTCTGAGTCATTATGTGTG 57.161 36.000 0.00 0.00 0.00 3.82
2891 3816 9.760660 GAGTCATTATGTGTGTCAAAAGATTAC 57.239 33.333 0.00 0.00 0.00 1.89
2936 3863 6.906678 GTGAGAAATTCAATTTTGTTTGTGGC 59.093 34.615 0.00 0.00 37.61 5.01
2978 3906 2.800544 CCAGTCCTAAATCAATACGGCG 59.199 50.000 4.80 4.80 0.00 6.46
2984 3912 0.450184 AAATCAATACGGCGGTGTGC 59.550 50.000 13.24 0.00 45.38 4.57
2989 3917 0.955905 AATACGGCGGTGTGCTTTTT 59.044 45.000 13.24 0.00 45.43 1.94
2990 3918 0.519961 ATACGGCGGTGTGCTTTTTC 59.480 50.000 13.24 0.00 45.43 2.29
2992 3920 0.533308 ACGGCGGTGTGCTTTTTCTA 60.533 50.000 13.24 0.00 45.43 2.10
3006 3943 5.624292 GCTTTTTCTAAAATGCAAGCCATG 58.376 37.500 16.68 0.00 44.05 3.66
3032 3993 4.948341 TTTGTAACTCACTAGGCTGTCA 57.052 40.909 0.00 0.00 0.00 3.58
3035 3996 4.628074 TGTAACTCACTAGGCTGTCAAAC 58.372 43.478 0.00 0.00 0.00 2.93
3037 3998 3.393089 ACTCACTAGGCTGTCAAACTG 57.607 47.619 0.00 0.00 0.00 3.16
3069 4032 4.004314 TGAAAGTTGGACGAACAAGTTCA 58.996 39.130 12.86 13.78 41.72 3.18
3090 4053 1.136695 GGACATCAGAGAGCCAGACAG 59.863 57.143 0.00 0.00 0.00 3.51
3180 4143 5.070001 GGCCTGCTACATGGTTTATCATTA 58.930 41.667 0.00 0.00 0.00 1.90
3657 5394 1.047596 ATGGATGAGCTCGCTCCAGT 61.048 55.000 30.34 20.41 42.10 4.00
3936 5819 3.978723 CTCGGCTGTCAGCGGTCTG 62.979 68.421 26.15 16.19 43.62 3.51
4328 6244 6.737254 TGAAGTAGCAAGTAATTGGTTAGC 57.263 37.500 13.26 4.70 34.21 3.09
4401 6318 3.929417 TCTTGTTTTGTACGTTCGTGG 57.071 42.857 8.14 0.00 0.00 4.94
4577 6781 4.962362 TCATAGGTGAAGAATGCTAGGTGA 59.038 41.667 0.00 0.00 0.00 4.02
4598 6802 7.290248 AGGTGACTACAATATACAGGCATAAGT 59.710 37.037 0.00 0.00 40.61 2.24
4646 6850 1.762708 CCAGGCATTGTTATCCCGTT 58.237 50.000 0.00 0.00 0.00 4.44
4752 6960 8.988064 TGTGTCTTCAACTTAGTCATATTCTC 57.012 34.615 0.00 0.00 0.00 2.87
5040 7249 4.250464 CACCCTATCTTAAAGACGTTGCA 58.750 43.478 0.00 0.00 0.00 4.08
5405 7614 5.822278 TGAGCTCGTCAATAGAAGTATGAC 58.178 41.667 9.64 0.00 29.64 3.06
5409 7618 6.264292 AGCTCGTCAATAGAAGTATGACTCAT 59.736 38.462 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 6.928492 TCTGTTGAAATTTCCTTTTGCCATAC 59.072 34.615 15.48 0.20 0.00 2.39
89 90 7.060383 TCTGTTGAAATTTCCTTTTGCCATA 57.940 32.000 15.48 0.00 0.00 2.74
139 140 5.337813 CCCAAAGAAAAGCTTCCAGCATATT 60.338 40.000 0.00 0.00 45.56 1.28
157 158 6.206634 TCAAGTATGCTGTTTACTTCCCAAAG 59.793 38.462 0.00 0.00 37.71 2.77
180 181 5.988561 GGTACAGATTTTGTTTTGCCATTCA 59.011 36.000 0.00 0.00 41.29 2.57
186 187 3.313690 CCGGGTACAGATTTTGTTTTGC 58.686 45.455 0.00 0.00 41.29 3.68
203 204 0.038310 AAGCTCTCTTTTTCCCCGGG 59.962 55.000 15.80 15.80 0.00 5.73
210 211 7.553044 GGTACACCATGTATAAGCTCTCTTTTT 59.447 37.037 0.00 0.00 35.05 1.94
213 214 5.900123 AGGTACACCATGTATAAGCTCTCTT 59.100 40.000 0.38 0.00 35.05 2.85
216 217 6.265649 CACTAGGTACACCATGTATAAGCTCT 59.734 42.308 0.38 0.00 35.05 4.09
225 226 4.589798 TGTACAACACTAGGTACACCATGT 59.410 41.667 0.38 0.00 43.45 3.21
249 250 1.691434 GCCCCAAACAGAAAACCATGA 59.309 47.619 0.00 0.00 0.00 3.07
281 282 4.167268 AGAACTCTTGCGTATTCGACTTC 58.833 43.478 0.00 0.00 39.71 3.01
287 288 6.752351 TCAATACTGAGAACTCTTGCGTATTC 59.248 38.462 3.51 0.00 0.00 1.75
293 294 5.473931 TCTGTCAATACTGAGAACTCTTGC 58.526 41.667 3.51 0.00 30.14 4.01
310 311 2.100197 CACTCCGGGTTATCTCTGTCA 58.900 52.381 0.00 0.00 0.00 3.58
401 402 4.709397 AGTGAAAACAACCCATTCAACTGA 59.291 37.500 0.00 0.00 35.07 3.41
438 439 3.006940 TGATCCAACGCAGACCATAAAC 58.993 45.455 0.00 0.00 0.00 2.01
451 452 0.951558 ACAAACTGCCGTGATCCAAC 59.048 50.000 0.00 0.00 0.00 3.77
470 471 4.582869 AGAGTGATTGTTGCAGATGCTTA 58.417 39.130 6.35 0.00 42.66 3.09
473 474 2.745821 TGAGAGTGATTGTTGCAGATGC 59.254 45.455 0.00 0.00 42.50 3.91
494 495 6.710295 TGTAAAACTGTTACATGCATCTGACT 59.290 34.615 0.00 0.00 30.68 3.41
523 524 4.713321 ACAAATGAATGGCCAGCTCTTTAT 59.287 37.500 13.05 0.00 0.00 1.40
525 526 2.901839 ACAAATGAATGGCCAGCTCTTT 59.098 40.909 13.05 11.81 0.00 2.52
527 528 1.822990 CACAAATGAATGGCCAGCTCT 59.177 47.619 13.05 0.00 0.00 4.09
543 550 1.680735 GTGGCAAATGTCCAGACACAA 59.319 47.619 1.88 0.00 45.05 3.33
552 559 0.953727 TGCTCACTGTGGCAAATGTC 59.046 50.000 17.61 0.00 35.40 3.06
569 576 1.144936 CTGGGATTCGGACCTCTGC 59.855 63.158 0.00 0.00 0.00 4.26
576 583 4.105217 TGATACTAGTACCTGGGATTCGGA 59.895 45.833 4.31 0.00 0.00 4.55
577 584 4.404640 TGATACTAGTACCTGGGATTCGG 58.595 47.826 4.31 0.00 0.00 4.30
578 585 7.536855 GTTATGATACTAGTACCTGGGATTCG 58.463 42.308 4.31 0.00 0.00 3.34
579 586 7.176340 ACGTTATGATACTAGTACCTGGGATTC 59.824 40.741 4.31 0.00 0.00 2.52
580 587 7.008941 ACGTTATGATACTAGTACCTGGGATT 58.991 38.462 4.31 0.00 0.00 3.01
581 588 6.550163 ACGTTATGATACTAGTACCTGGGAT 58.450 40.000 4.31 0.00 0.00 3.85
582 589 5.945310 ACGTTATGATACTAGTACCTGGGA 58.055 41.667 4.31 0.00 0.00 4.37
583 590 7.750229 TTACGTTATGATACTAGTACCTGGG 57.250 40.000 4.31 0.00 0.00 4.45
584 591 9.837525 GAATTACGTTATGATACTAGTACCTGG 57.162 37.037 4.31 0.00 0.00 4.45
593 600 9.627395 GCACTATCTGAATTACGTTATGATACT 57.373 33.333 0.00 0.00 0.00 2.12
594 601 8.861101 GGCACTATCTGAATTACGTTATGATAC 58.139 37.037 0.00 0.00 0.00 2.24
595 602 8.581578 TGGCACTATCTGAATTACGTTATGATA 58.418 33.333 0.00 0.00 0.00 2.15
596 603 7.441836 TGGCACTATCTGAATTACGTTATGAT 58.558 34.615 0.00 0.00 0.00 2.45
597 604 6.811954 TGGCACTATCTGAATTACGTTATGA 58.188 36.000 0.00 0.00 0.00 2.15
598 605 6.701841 ACTGGCACTATCTGAATTACGTTATG 59.298 38.462 0.00 0.00 0.00 1.90
599 606 6.701841 CACTGGCACTATCTGAATTACGTTAT 59.298 38.462 0.00 0.00 0.00 1.89
600 607 6.040247 CACTGGCACTATCTGAATTACGTTA 58.960 40.000 0.00 0.00 0.00 3.18
601 608 4.870426 CACTGGCACTATCTGAATTACGTT 59.130 41.667 0.00 0.00 0.00 3.99
602 609 4.159693 TCACTGGCACTATCTGAATTACGT 59.840 41.667 0.00 0.00 0.00 3.57
603 610 4.682787 TCACTGGCACTATCTGAATTACG 58.317 43.478 0.00 0.00 0.00 3.18
604 611 5.665459 ACTCACTGGCACTATCTGAATTAC 58.335 41.667 0.00 0.00 0.00 1.89
605 612 5.658634 AGACTCACTGGCACTATCTGAATTA 59.341 40.000 0.00 0.00 0.00 1.40
606 613 4.469227 AGACTCACTGGCACTATCTGAATT 59.531 41.667 0.00 0.00 0.00 2.17
607 614 4.029520 AGACTCACTGGCACTATCTGAAT 58.970 43.478 0.00 0.00 0.00 2.57
608 615 3.435275 AGACTCACTGGCACTATCTGAA 58.565 45.455 0.00 0.00 0.00 3.02
609 616 3.093057 AGACTCACTGGCACTATCTGA 57.907 47.619 0.00 0.00 0.00 3.27
610 617 6.832520 ATATAGACTCACTGGCACTATCTG 57.167 41.667 0.00 0.00 0.00 2.90
611 618 7.847711 AAATATAGACTCACTGGCACTATCT 57.152 36.000 0.00 0.00 0.00 1.98
612 619 7.386299 CCAAAATATAGACTCACTGGCACTATC 59.614 40.741 0.00 0.00 0.00 2.08
613 620 7.220030 CCAAAATATAGACTCACTGGCACTAT 58.780 38.462 0.00 0.00 0.00 2.12
614 621 6.582636 CCAAAATATAGACTCACTGGCACTA 58.417 40.000 0.00 0.00 0.00 2.74
615 622 5.431765 CCAAAATATAGACTCACTGGCACT 58.568 41.667 0.00 0.00 0.00 4.40
616 623 4.035675 GCCAAAATATAGACTCACTGGCAC 59.964 45.833 4.92 0.00 45.91 5.01
617 624 4.199310 GCCAAAATATAGACTCACTGGCA 58.801 43.478 4.92 0.00 45.91 4.92
618 625 4.199310 TGCCAAAATATAGACTCACTGGC 58.801 43.478 2.82 2.82 46.63 4.85
619 626 6.757897 TTTGCCAAAATATAGACTCACTGG 57.242 37.500 0.00 0.00 0.00 4.00
620 627 7.592938 TGTTTTGCCAAAATATAGACTCACTG 58.407 34.615 5.81 0.00 32.22 3.66
621 628 7.665559 TCTGTTTTGCCAAAATATAGACTCACT 59.334 33.333 5.81 0.00 32.22 3.41
622 629 7.750903 GTCTGTTTTGCCAAAATATAGACTCAC 59.249 37.037 23.20 6.20 36.66 3.51
623 630 7.446931 TGTCTGTTTTGCCAAAATATAGACTCA 59.553 33.333 26.65 15.85 38.31 3.41
624 631 7.816640 TGTCTGTTTTGCCAAAATATAGACTC 58.183 34.615 26.65 14.41 38.31 3.36
625 632 7.759489 TGTCTGTTTTGCCAAAATATAGACT 57.241 32.000 26.65 0.00 38.31 3.24
626 633 9.722056 CTATGTCTGTTTTGCCAAAATATAGAC 57.278 33.333 23.45 23.45 38.16 2.59
627 634 9.461312 ACTATGTCTGTTTTGCCAAAATATAGA 57.539 29.630 5.81 7.88 32.22 1.98
634 641 8.394877 CGAATATACTATGTCTGTTTTGCCAAA 58.605 33.333 0.00 0.00 0.00 3.28
635 642 7.551262 ACGAATATACTATGTCTGTTTTGCCAA 59.449 33.333 0.00 0.00 0.00 4.52
636 643 7.011016 CACGAATATACTATGTCTGTTTTGCCA 59.989 37.037 0.00 0.00 0.00 4.92
637 644 7.345192 CACGAATATACTATGTCTGTTTTGCC 58.655 38.462 0.00 0.00 0.00 4.52
638 645 7.345192 CCACGAATATACTATGTCTGTTTTGC 58.655 38.462 0.00 0.00 0.00 3.68
639 646 7.518370 GCCCACGAATATACTATGTCTGTTTTG 60.518 40.741 0.00 0.00 0.00 2.44
640 647 6.482308 GCCCACGAATATACTATGTCTGTTTT 59.518 38.462 0.00 0.00 0.00 2.43
641 648 5.989777 GCCCACGAATATACTATGTCTGTTT 59.010 40.000 0.00 0.00 0.00 2.83
642 649 5.539048 GCCCACGAATATACTATGTCTGTT 58.461 41.667 0.00 0.00 0.00 3.16
643 650 4.321008 CGCCCACGAATATACTATGTCTGT 60.321 45.833 0.00 0.00 43.93 3.41
644 651 4.166523 CGCCCACGAATATACTATGTCTG 58.833 47.826 0.00 0.00 43.93 3.51
645 652 4.436242 CGCCCACGAATATACTATGTCT 57.564 45.455 0.00 0.00 43.93 3.41
651 658 9.960056 CTGAAAGAACTCGCCCACGAATATACT 62.960 44.444 0.00 0.00 42.89 2.12
652 659 7.921734 CTGAAAGAACTCGCCCACGAATATAC 61.922 46.154 0.00 0.00 42.89 1.47
653 660 5.963334 CTGAAAGAACTCGCCCACGAATATA 60.963 44.000 0.00 0.00 42.89 0.86
654 661 5.210845 CTGAAAGAACTCGCCCACGAATAT 61.211 45.833 0.00 0.00 42.89 1.28
655 662 3.921411 CTGAAAGAACTCGCCCACGAATA 60.921 47.826 0.00 0.00 42.89 1.75
656 663 3.187683 CTGAAAGAACTCGCCCACGAAT 61.188 50.000 0.00 0.00 42.89 3.34
657 664 1.872237 CTGAAAGAACTCGCCCACGAA 60.872 52.381 0.00 0.00 42.89 3.85
658 665 0.319555 CTGAAAGAACTCGCCCACGA 60.320 55.000 0.00 0.00 41.53 4.35
659 666 1.901650 GCTGAAAGAACTCGCCCACG 61.902 60.000 0.00 0.00 36.87 4.94
660 667 0.884704 TGCTGAAAGAACTCGCCCAC 60.885 55.000 0.00 0.00 34.07 4.61
661 668 0.179032 TTGCTGAAAGAACTCGCCCA 60.179 50.000 0.00 0.00 34.07 5.36
662 669 0.951558 TTTGCTGAAAGAACTCGCCC 59.048 50.000 0.00 0.00 34.07 6.13
663 670 2.226437 TGATTTGCTGAAAGAACTCGCC 59.774 45.455 0.00 0.00 34.07 5.54
664 671 3.542712 TGATTTGCTGAAAGAACTCGC 57.457 42.857 0.00 0.00 34.07 5.03
665 672 8.679288 AATATTTGATTTGCTGAAAGAACTCG 57.321 30.769 0.00 0.00 34.07 4.18
667 674 9.428097 GGAAATATTTGATTTGCTGAAAGAACT 57.572 29.630 5.17 0.00 34.07 3.01
668 675 9.428097 AGGAAATATTTGATTTGCTGAAAGAAC 57.572 29.630 5.17 0.00 38.08 3.01
736 743 9.327731 CCCTACAACTAGAAAAGGAGGATATAT 57.672 37.037 0.00 0.00 0.00 0.86
737 744 8.294690 ACCCTACAACTAGAAAAGGAGGATATA 58.705 37.037 0.00 0.00 0.00 0.86
738 745 7.071321 CACCCTACAACTAGAAAAGGAGGATAT 59.929 40.741 0.00 0.00 0.00 1.63
739 746 6.383147 CACCCTACAACTAGAAAAGGAGGATA 59.617 42.308 0.00 0.00 0.00 2.59
740 747 5.189934 CACCCTACAACTAGAAAAGGAGGAT 59.810 44.000 0.00 0.00 0.00 3.24
741 748 4.530946 CACCCTACAACTAGAAAAGGAGGA 59.469 45.833 0.00 0.00 0.00 3.71
742 749 4.323562 CCACCCTACAACTAGAAAAGGAGG 60.324 50.000 0.00 0.00 0.00 4.30
743 750 4.530946 TCCACCCTACAACTAGAAAAGGAG 59.469 45.833 0.00 0.00 0.00 3.69
744 751 4.495565 TCCACCCTACAACTAGAAAAGGA 58.504 43.478 0.00 0.00 0.00 3.36
745 752 4.903045 TCCACCCTACAACTAGAAAAGG 57.097 45.455 0.00 0.00 0.00 3.11
746 753 7.012421 GCAATATCCACCCTACAACTAGAAAAG 59.988 40.741 0.00 0.00 0.00 2.27
747 754 6.826741 GCAATATCCACCCTACAACTAGAAAA 59.173 38.462 0.00 0.00 0.00 2.29
748 755 6.157994 AGCAATATCCACCCTACAACTAGAAA 59.842 38.462 0.00 0.00 0.00 2.52
749 756 5.665812 AGCAATATCCACCCTACAACTAGAA 59.334 40.000 0.00 0.00 0.00 2.10
750 757 5.216622 AGCAATATCCACCCTACAACTAGA 58.783 41.667 0.00 0.00 0.00 2.43
751 758 5.552870 AGCAATATCCACCCTACAACTAG 57.447 43.478 0.00 0.00 0.00 2.57
752 759 5.968676 AAGCAATATCCACCCTACAACTA 57.031 39.130 0.00 0.00 0.00 2.24
753 760 4.862641 AAGCAATATCCACCCTACAACT 57.137 40.909 0.00 0.00 0.00 3.16
754 761 4.947388 TCAAAGCAATATCCACCCTACAAC 59.053 41.667 0.00 0.00 0.00 3.32
755 762 5.186256 TCAAAGCAATATCCACCCTACAA 57.814 39.130 0.00 0.00 0.00 2.41
756 763 4.853468 TCAAAGCAATATCCACCCTACA 57.147 40.909 0.00 0.00 0.00 2.74
757 764 6.524101 TTTTCAAAGCAATATCCACCCTAC 57.476 37.500 0.00 0.00 0.00 3.18
758 765 6.773976 CTTTTCAAAGCAATATCCACCCTA 57.226 37.500 0.00 0.00 0.00 3.53
759 766 5.665916 CTTTTCAAAGCAATATCCACCCT 57.334 39.130 0.00 0.00 0.00 4.34
773 780 8.721019 ACTCAATTGATTCTTTGCTTTTCAAA 57.279 26.923 8.96 0.00 42.01 2.69
774 781 7.439056 GGACTCAATTGATTCTTTGCTTTTCAA 59.561 33.333 21.10 0.00 0.00 2.69
775 782 6.925165 GGACTCAATTGATTCTTTGCTTTTCA 59.075 34.615 21.10 0.00 0.00 2.69
776 783 6.925165 TGGACTCAATTGATTCTTTGCTTTTC 59.075 34.615 21.10 6.04 0.00 2.29
777 784 6.819284 TGGACTCAATTGATTCTTTGCTTTT 58.181 32.000 21.10 0.00 0.00 2.27
778 785 6.409524 TGGACTCAATTGATTCTTTGCTTT 57.590 33.333 21.10 0.00 0.00 3.51
779 786 6.409524 TTGGACTCAATTGATTCTTTGCTT 57.590 33.333 21.10 0.00 0.00 3.91
780 787 5.566230 GCTTGGACTCAATTGATTCTTTGCT 60.566 40.000 21.10 0.00 31.75 3.91
781 788 4.624452 GCTTGGACTCAATTGATTCTTTGC 59.376 41.667 21.10 17.78 31.75 3.68
782 789 5.166398 GGCTTGGACTCAATTGATTCTTTG 58.834 41.667 21.10 13.56 31.75 2.77
783 790 4.082571 CGGCTTGGACTCAATTGATTCTTT 60.083 41.667 21.10 0.62 31.75 2.52
784 791 3.441572 CGGCTTGGACTCAATTGATTCTT 59.558 43.478 21.10 2.86 31.75 2.52
785 792 3.012518 CGGCTTGGACTCAATTGATTCT 58.987 45.455 21.10 3.43 31.75 2.40
786 793 2.098117 CCGGCTTGGACTCAATTGATTC 59.902 50.000 15.52 15.52 42.00 2.52
787 794 2.094675 CCGGCTTGGACTCAATTGATT 58.905 47.619 8.96 2.75 42.00 2.57
788 795 1.683011 CCCGGCTTGGACTCAATTGAT 60.683 52.381 8.96 0.00 42.00 2.57
789 796 0.322456 CCCGGCTTGGACTCAATTGA 60.322 55.000 8.12 8.12 42.00 2.57
790 797 0.322456 TCCCGGCTTGGACTCAATTG 60.322 55.000 0.00 0.00 42.00 2.32
791 798 0.625849 ATCCCGGCTTGGACTCAATT 59.374 50.000 0.00 0.00 42.00 2.32
792 799 0.625849 AATCCCGGCTTGGACTCAAT 59.374 50.000 0.00 0.00 42.00 2.57
793 800 1.281419 TAATCCCGGCTTGGACTCAA 58.719 50.000 0.00 0.00 42.00 3.02
794 801 1.507140 ATAATCCCGGCTTGGACTCA 58.493 50.000 0.00 0.00 42.00 3.41
795 802 3.983044 ATATAATCCCGGCTTGGACTC 57.017 47.619 0.00 0.00 42.00 3.36
796 803 5.726793 AGAATATATAATCCCGGCTTGGACT 59.273 40.000 0.00 0.00 42.00 3.85
797 804 5.990668 AGAATATATAATCCCGGCTTGGAC 58.009 41.667 0.00 0.00 42.00 4.02
798 805 6.636454 AAGAATATATAATCCCGGCTTGGA 57.364 37.500 0.00 0.00 42.00 3.53
799 806 7.703058 AAAAGAATATATAATCCCGGCTTGG 57.297 36.000 0.00 0.00 37.55 3.61
800 807 8.893727 CCTAAAAGAATATATAATCCCGGCTTG 58.106 37.037 0.00 0.00 0.00 4.01
801 808 8.832735 TCCTAAAAGAATATATAATCCCGGCTT 58.167 33.333 0.00 0.00 0.00 4.35
802 809 8.388656 TCCTAAAAGAATATATAATCCCGGCT 57.611 34.615 0.00 0.00 0.00 5.52
803 810 9.457436 TTTCCTAAAAGAATATATAATCCCGGC 57.543 33.333 0.00 0.00 0.00 6.13
813 820 9.783081 GTAATCCGGGTTTCCTAAAAGAATATA 57.217 33.333 4.62 0.00 0.00 0.86
814 821 8.500238 AGTAATCCGGGTTTCCTAAAAGAATAT 58.500 33.333 4.62 0.00 0.00 1.28
815 822 7.771826 CAGTAATCCGGGTTTCCTAAAAGAATA 59.228 37.037 4.62 0.00 0.00 1.75
816 823 6.602009 CAGTAATCCGGGTTTCCTAAAAGAAT 59.398 38.462 4.62 0.00 0.00 2.40
817 824 5.941647 CAGTAATCCGGGTTTCCTAAAAGAA 59.058 40.000 4.62 0.00 0.00 2.52
818 825 5.013391 ACAGTAATCCGGGTTTCCTAAAAGA 59.987 40.000 4.62 0.00 0.00 2.52
819 826 5.250982 ACAGTAATCCGGGTTTCCTAAAAG 58.749 41.667 4.62 0.00 0.00 2.27
820 827 5.245584 ACAGTAATCCGGGTTTCCTAAAA 57.754 39.130 4.62 0.00 0.00 1.52
821 828 4.914177 ACAGTAATCCGGGTTTCCTAAA 57.086 40.909 4.62 0.00 0.00 1.85
822 829 4.566070 CCAACAGTAATCCGGGTTTCCTAA 60.566 45.833 4.62 0.00 0.00 2.69
823 830 3.054948 CCAACAGTAATCCGGGTTTCCTA 60.055 47.826 4.62 0.00 0.00 2.94
824 831 2.290705 CCAACAGTAATCCGGGTTTCCT 60.291 50.000 4.62 0.00 0.00 3.36
825 832 2.089201 CCAACAGTAATCCGGGTTTCC 58.911 52.381 4.62 0.00 0.00 3.13
826 833 2.786777 ACCAACAGTAATCCGGGTTTC 58.213 47.619 4.62 0.00 0.00 2.78
827 834 2.963599 ACCAACAGTAATCCGGGTTT 57.036 45.000 4.62 0.00 0.00 3.27
828 835 2.963599 AACCAACAGTAATCCGGGTT 57.036 45.000 4.75 4.75 33.99 4.11
829 836 2.963599 AAACCAACAGTAATCCGGGT 57.036 45.000 0.00 0.00 0.00 5.28
830 837 4.157105 CCTTTAAACCAACAGTAATCCGGG 59.843 45.833 0.00 0.00 0.00 5.73
831 838 4.763279 ACCTTTAAACCAACAGTAATCCGG 59.237 41.667 0.00 0.00 0.00 5.14
832 839 5.239963 ACACCTTTAAACCAACAGTAATCCG 59.760 40.000 0.00 0.00 0.00 4.18
833 840 6.644248 ACACCTTTAAACCAACAGTAATCC 57.356 37.500 0.00 0.00 0.00 3.01
834 841 6.921307 CCAACACCTTTAAACCAACAGTAATC 59.079 38.462 0.00 0.00 0.00 1.75
835 842 6.381707 ACCAACACCTTTAAACCAACAGTAAT 59.618 34.615 0.00 0.00 0.00 1.89
836 843 5.715753 ACCAACACCTTTAAACCAACAGTAA 59.284 36.000 0.00 0.00 0.00 2.24
837 844 5.262804 ACCAACACCTTTAAACCAACAGTA 58.737 37.500 0.00 0.00 0.00 2.74
838 845 4.090819 ACCAACACCTTTAAACCAACAGT 58.909 39.130 0.00 0.00 0.00 3.55
839 846 4.729227 ACCAACACCTTTAAACCAACAG 57.271 40.909 0.00 0.00 0.00 3.16
840 847 6.793505 ATTACCAACACCTTTAAACCAACA 57.206 33.333 0.00 0.00 0.00 3.33
841 848 9.767228 AATAATTACCAACACCTTTAAACCAAC 57.233 29.630 0.00 0.00 0.00 3.77
843 850 9.765795 CAAATAATTACCAACACCTTTAAACCA 57.234 29.630 0.00 0.00 0.00 3.67
844 851 9.984190 TCAAATAATTACCAACACCTTTAAACC 57.016 29.630 0.00 0.00 0.00 3.27
867 874 9.635520 GTGCATCTTACTACTACTAGTTTTCAA 57.364 33.333 0.00 0.00 34.79 2.69
868 875 8.248945 GGTGCATCTTACTACTACTAGTTTTCA 58.751 37.037 0.00 0.00 34.79 2.69
869 876 7.705752 GGGTGCATCTTACTACTACTAGTTTTC 59.294 40.741 0.00 0.00 34.79 2.29
870 877 7.554211 GGGTGCATCTTACTACTACTAGTTTT 58.446 38.462 0.00 0.00 34.79 2.43
871 878 6.183360 CGGGTGCATCTTACTACTACTAGTTT 60.183 42.308 0.00 0.00 34.79 2.66
872 879 5.298777 CGGGTGCATCTTACTACTACTAGTT 59.701 44.000 0.00 0.00 34.79 2.24
873 880 4.820716 CGGGTGCATCTTACTACTACTAGT 59.179 45.833 0.00 0.00 37.04 2.57
874 881 4.215827 CCGGGTGCATCTTACTACTACTAG 59.784 50.000 0.00 0.00 0.00 2.57
875 882 4.139786 CCGGGTGCATCTTACTACTACTA 58.860 47.826 0.00 0.00 0.00 1.82
876 883 2.957006 CCGGGTGCATCTTACTACTACT 59.043 50.000 0.00 0.00 0.00 2.57
877 884 2.954318 TCCGGGTGCATCTTACTACTAC 59.046 50.000 0.00 0.00 0.00 2.73
878 885 3.117776 TCTCCGGGTGCATCTTACTACTA 60.118 47.826 0.00 0.00 0.00 1.82
879 886 2.032620 CTCCGGGTGCATCTTACTACT 58.967 52.381 0.00 0.00 0.00 2.57
880 887 2.029623 TCTCCGGGTGCATCTTACTAC 58.970 52.381 0.00 0.00 0.00 2.73
881 888 2.029623 GTCTCCGGGTGCATCTTACTA 58.970 52.381 0.00 0.00 0.00 1.82
882 889 0.824759 GTCTCCGGGTGCATCTTACT 59.175 55.000 0.00 0.00 0.00 2.24
883 890 0.527817 CGTCTCCGGGTGCATCTTAC 60.528 60.000 0.00 0.00 0.00 2.34
884 891 0.681887 TCGTCTCCGGGTGCATCTTA 60.682 55.000 0.00 0.00 33.95 2.10
885 892 1.949847 CTCGTCTCCGGGTGCATCTT 61.950 60.000 0.00 0.00 33.95 2.40
886 893 2.362503 TCGTCTCCGGGTGCATCT 60.363 61.111 0.00 0.00 33.95 2.90
887 894 2.105128 CTCGTCTCCGGGTGCATC 59.895 66.667 0.00 0.00 33.95 3.91
888 895 4.148825 GCTCGTCTCCGGGTGCAT 62.149 66.667 0.00 0.00 36.74 3.96
890 897 3.665675 AATGCTCGTCTCCGGGTGC 62.666 63.158 0.00 0.00 36.74 5.01
891 898 1.079127 AAATGCTCGTCTCCGGGTG 60.079 57.895 0.00 0.00 36.74 4.61
892 899 1.079127 CAAATGCTCGTCTCCGGGT 60.079 57.895 0.00 0.00 36.74 5.28
893 900 1.815421 CCAAATGCTCGTCTCCGGG 60.815 63.158 0.00 0.00 37.72 5.73
894 901 2.464459 GCCAAATGCTCGTCTCCGG 61.464 63.158 0.00 0.00 36.87 5.14
895 902 3.093278 GCCAAATGCTCGTCTCCG 58.907 61.111 0.00 0.00 36.87 4.63
904 911 2.024590 GATGCCCCTGAGCCAAATGC 62.025 60.000 0.00 0.00 41.71 3.56
905 912 0.685131 TGATGCCCCTGAGCCAAATG 60.685 55.000 0.00 0.00 0.00 2.32
906 913 0.685458 GTGATGCCCCTGAGCCAAAT 60.685 55.000 0.00 0.00 0.00 2.32
907 914 1.304381 GTGATGCCCCTGAGCCAAA 60.304 57.895 0.00 0.00 0.00 3.28
908 915 2.356278 GTGATGCCCCTGAGCCAA 59.644 61.111 0.00 0.00 0.00 4.52
909 916 4.100084 CGTGATGCCCCTGAGCCA 62.100 66.667 0.00 0.00 0.00 4.75
910 917 4.864334 CCGTGATGCCCCTGAGCC 62.864 72.222 0.00 0.00 0.00 4.70
911 918 2.819984 TTTCCGTGATGCCCCTGAGC 62.820 60.000 0.00 0.00 0.00 4.26
916 923 0.463833 CTACCTTTCCGTGATGCCCC 60.464 60.000 0.00 0.00 0.00 5.80
1018 1114 2.169330 GAACCTGACGGGAAGAGTACT 58.831 52.381 7.51 0.00 38.76 2.73
1020 1116 2.599408 AGAACCTGACGGGAAGAGTA 57.401 50.000 7.51 0.00 38.76 2.59
1021 1117 1.718280 AAGAACCTGACGGGAAGAGT 58.282 50.000 7.51 0.00 38.76 3.24
1022 1118 3.181474 GGATAAGAACCTGACGGGAAGAG 60.181 52.174 7.51 0.00 38.76 2.85
1025 1141 2.542550 TGGATAAGAACCTGACGGGAA 58.457 47.619 7.51 0.00 38.76 3.97
1041 1157 3.550431 CGCGGACCAGGGATGGAT 61.550 66.667 0.00 0.00 0.00 3.41
1094 1231 4.752101 CCCATTTATCACCATCTTCGACTC 59.248 45.833 0.00 0.00 0.00 3.36
1097 1234 3.714280 TCCCCATTTATCACCATCTTCGA 59.286 43.478 0.00 0.00 0.00 3.71
1123 1263 3.265995 CACTAACTAACCAACCAGGGGAT 59.734 47.826 0.00 0.00 43.89 3.85
1215 1372 3.288092 GGCTTTTCCCCCTGTATTAGTG 58.712 50.000 0.00 0.00 0.00 2.74
1235 1398 2.966182 GAAATAGACGGGCGGACGGG 62.966 65.000 0.00 0.00 38.39 5.28
1236 1399 1.590792 GAAATAGACGGGCGGACGG 60.591 63.158 0.00 0.00 38.39 4.79
1237 1400 0.870307 CTGAAATAGACGGGCGGACG 60.870 60.000 0.00 0.00 40.31 4.79
1250 1413 5.171476 ACGTCGATCTGAAATGTCTGAAAT 58.829 37.500 0.00 0.00 35.59 2.17
1319 1527 9.180678 TCTCTCGATTATTGCAAAAAGAAAAAC 57.819 29.630 1.71 0.00 0.00 2.43
1325 1533 7.201384 GCCTTTTCTCTCGATTATTGCAAAAAG 60.201 37.037 1.71 4.11 33.28 2.27
1349 1559 1.556911 TCTGAAAGAGACTGATGGGCC 59.443 52.381 0.00 0.00 38.67 5.80
1446 1677 9.216117 GACTGAAACCAATACAGTACTATGTTT 57.784 33.333 0.00 0.00 43.49 2.83
1447 1678 7.544566 CGACTGAAACCAATACAGTACTATGTT 59.455 37.037 0.00 0.00 43.49 2.71
1515 1748 7.751646 TCAAATTAGGAGAAAACTTGGACCTA 58.248 34.615 0.00 0.00 0.00 3.08
1522 1755 6.293244 CGTCCGTTCAAATTAGGAGAAAACTT 60.293 38.462 0.00 0.00 32.82 2.66
1534 1767 3.340034 TCATTAGCCGTCCGTTCAAATT 58.660 40.909 0.00 0.00 0.00 1.82
1540 1773 1.802365 GTTGTTCATTAGCCGTCCGTT 59.198 47.619 0.00 0.00 0.00 4.44
1544 1777 5.796350 ATTAGTGTTGTTCATTAGCCGTC 57.204 39.130 0.00 0.00 0.00 4.79
1785 2021 0.108138 AATTTCAGAGCGGAGGGTCG 60.108 55.000 0.00 0.00 45.26 4.79
1901 2137 3.081710 TCTTGTCCAGGATCTCGTACA 57.918 47.619 0.00 0.00 0.00 2.90
1926 2162 2.031012 CAGGTGACCTCGCTTGCA 59.969 61.111 0.00 0.00 0.00 4.08
1950 2186 0.251916 TATTCTTGTGCCTGACCCCG 59.748 55.000 0.00 0.00 0.00 5.73
2107 2343 4.162040 AGGCTGATCTGATTTTACCAGG 57.838 45.455 3.42 0.00 32.73 4.45
2109 2345 6.009589 TCAAAAGGCTGATCTGATTTTACCA 58.990 36.000 3.42 0.00 0.00 3.25
2123 2359 0.316204 CACCCAAGCTCAAAAGGCTG 59.684 55.000 0.00 0.00 40.19 4.85
2130 2366 0.823356 GCTGAACCACCCAAGCTCAA 60.823 55.000 0.00 0.00 0.00 3.02
2132 2368 1.973812 GGCTGAACCACCCAAGCTC 60.974 63.158 0.00 0.00 38.86 4.09
2133 2369 1.133809 TAGGCTGAACCACCCAAGCT 61.134 55.000 0.00 0.00 43.14 3.74
2134 2370 0.034089 ATAGGCTGAACCACCCAAGC 60.034 55.000 0.00 0.00 43.14 4.01
2135 2371 1.561542 AGATAGGCTGAACCACCCAAG 59.438 52.381 0.00 0.00 43.14 3.61
2138 2374 1.414550 GAGAGATAGGCTGAACCACCC 59.585 57.143 0.00 0.00 43.14 4.61
2139 2375 1.414550 GGAGAGATAGGCTGAACCACC 59.585 57.143 0.00 0.00 43.14 4.61
2140 2376 1.067821 CGGAGAGATAGGCTGAACCAC 59.932 57.143 0.00 0.00 43.14 4.16
2142 2378 0.032815 GCGGAGAGATAGGCTGAACC 59.967 60.000 0.00 0.00 39.61 3.62
2144 2380 1.709578 ATGCGGAGAGATAGGCTGAA 58.290 50.000 0.00 0.00 0.00 3.02
2145 2381 2.586648 TATGCGGAGAGATAGGCTGA 57.413 50.000 0.00 0.00 0.00 4.26
2146 2382 6.832520 ATATATATGCGGAGAGATAGGCTG 57.167 41.667 0.00 0.00 0.00 4.85
2147 2383 7.609918 CACTATATATATGCGGAGAGATAGGCT 59.390 40.741 5.44 0.00 0.00 4.58
2148 2384 7.627513 GCACTATATATATGCGGAGAGATAGGC 60.628 44.444 5.44 0.00 0.00 3.93
2150 2386 8.560355 AGCACTATATATATGCGGAGAGATAG 57.440 38.462 5.44 0.00 44.25 2.08
2152 2388 8.788806 GTTAGCACTATATATATGCGGAGAGAT 58.211 37.037 5.44 0.00 44.25 2.75
2154 2390 8.160521 AGTTAGCACTATATATATGCGGAGAG 57.839 38.462 5.44 0.00 44.25 3.20
2192 3087 3.963374 AGCTGCATCTGTGGAGAGTATTA 59.037 43.478 1.02 0.00 45.73 0.98
2193 3088 2.770802 AGCTGCATCTGTGGAGAGTATT 59.229 45.455 1.02 0.00 45.73 1.89
2212 3107 3.002791 TGATCCACTGAAATCGACAAGC 58.997 45.455 0.00 0.00 0.00 4.01
2221 3116 4.888917 TGATAACGTGTGATCCACTGAAA 58.111 39.130 11.12 0.00 42.20 2.69
2231 3126 6.317642 CCCCTTGATTATTTGATAACGTGTGA 59.682 38.462 0.00 0.00 0.00 3.58
2241 3136 4.290985 TCACAGACCCCCTTGATTATTTGA 59.709 41.667 0.00 0.00 0.00 2.69
2257 3152 1.438651 TAATGCACGCCTTCACAGAC 58.561 50.000 0.00 0.00 0.00 3.51
2265 3160 2.401583 TGTGAAGATAATGCACGCCT 57.598 45.000 0.00 0.00 35.37 5.52
2271 3166 2.096496 ACGCTGCTTGTGAAGATAATGC 59.904 45.455 0.00 0.00 0.00 3.56
2284 3179 4.273480 GTCCATGTGAATAATACGCTGCTT 59.727 41.667 0.00 0.00 0.00 3.91
2337 3232 1.102154 TAATTCCGGGCAGCATGTTG 58.898 50.000 5.00 5.00 39.31 3.33
2350 3245 5.535333 TGATAGACCGAAATCCGTAATTCC 58.465 41.667 0.00 0.00 36.31 3.01
2356 3251 3.488721 CGTCTTGATAGACCGAAATCCGT 60.489 47.826 0.00 0.00 46.63 4.69
2387 3282 1.555075 TGATAGCCCGACTCTTGCTTT 59.445 47.619 0.00 0.00 36.57 3.51
2406 3301 2.605338 CGTCCCATGCTTGTTTTCAGTG 60.605 50.000 0.00 0.00 0.00 3.66
2420 3315 0.969894 GCTAGCCTACATCGTCCCAT 59.030 55.000 2.29 0.00 0.00 4.00
2472 3369 2.422597 TGCGACAAAGTTGGTAGATGG 58.577 47.619 0.00 0.00 0.00 3.51
2489 3389 9.632969 GTACAATTAGTGAATAAAGTGTATGCG 57.367 33.333 3.88 0.00 33.73 4.73
2561 3464 9.413734 CTTGAAGGTGATTTCTCCCTTATTTAT 57.586 33.333 0.00 0.00 38.68 1.40
2569 3472 4.006319 CTGTCTTGAAGGTGATTTCTCCC 58.994 47.826 0.00 0.00 0.00 4.30
2644 3547 3.356529 ACCTCCTTAACATTGGAGCAG 57.643 47.619 3.68 0.00 46.23 4.24
2677 3580 4.916983 TGTTGTTTCTTGGAACCTCATG 57.083 40.909 0.00 0.00 0.00 3.07
2693 3597 6.183360 GCTAAGCATGTTGTCTATGATGTTGT 60.183 38.462 0.00 0.00 0.00 3.32
2700 3607 5.550232 TTGTGCTAAGCATGTTGTCTATG 57.450 39.130 0.00 0.00 41.91 2.23
2713 3623 7.592938 TCAACAATATTGAGGTTTGTGCTAAG 58.407 34.615 22.16 0.00 34.04 2.18
2726 3636 7.924947 TGTTGCATTTCTGTTCAACAATATTGA 59.075 29.630 22.16 0.00 43.71 2.57
2731 3641 5.417811 TGTGTTGCATTTCTGTTCAACAAT 58.582 33.333 8.02 0.00 46.70 2.71
2742 3653 7.972277 ACTCTGATTGAATATGTGTTGCATTTC 59.028 33.333 0.00 0.00 38.94 2.17
2773 3686 7.865385 TGTCATTTGCAAATTCTACTGTTAACC 59.135 33.333 21.95 1.30 0.00 2.85
2774 3687 8.795786 TGTCATTTGCAAATTCTACTGTTAAC 57.204 30.769 21.95 6.73 0.00 2.01
2830 3743 8.515473 AACCATCTTTATTTTACGTTTCTTGC 57.485 30.769 0.00 0.00 0.00 4.01
2856 3780 7.332678 TGACACACATAATGACTCAGAAATCAG 59.667 37.037 0.00 0.00 0.00 2.90
2936 3863 6.659317 CTGGAGACCAAATGCAAGGATACTG 61.659 48.000 9.85 0.87 38.92 2.74
3025 3986 2.012673 CTATCTGCCAGTTTGACAGCC 58.987 52.381 0.00 0.00 0.00 4.85
3027 3988 4.318332 TCAACTATCTGCCAGTTTGACAG 58.682 43.478 0.00 0.00 33.99 3.51
3029 3990 5.239525 ACTTTCAACTATCTGCCAGTTTGAC 59.760 40.000 0.00 0.00 33.99 3.18
3030 3991 5.376625 ACTTTCAACTATCTGCCAGTTTGA 58.623 37.500 0.00 0.00 33.99 2.69
3031 3992 5.695851 ACTTTCAACTATCTGCCAGTTTG 57.304 39.130 0.00 0.00 33.99 2.93
3032 3993 5.010012 CCAACTTTCAACTATCTGCCAGTTT 59.990 40.000 0.00 0.00 33.99 2.66
3035 3996 4.154918 GTCCAACTTTCAACTATCTGCCAG 59.845 45.833 0.00 0.00 0.00 4.85
3037 3998 3.125316 CGTCCAACTTTCAACTATCTGCC 59.875 47.826 0.00 0.00 0.00 4.85
3042 4005 5.820947 ACTTGTTCGTCCAACTTTCAACTAT 59.179 36.000 0.00 0.00 35.79 2.12
3069 4032 1.272928 TGTCTGGCTCTCTGATGTCCT 60.273 52.381 0.00 0.00 0.00 3.85
3090 4053 6.142817 CACATACTTTTACTTGTTCCAGTGC 58.857 40.000 0.00 0.00 0.00 4.40
3180 4143 2.239654 CCACATCACCCAGTATTCCACT 59.760 50.000 0.00 0.00 38.32 4.00
3712 5450 2.916640 TGGCGCATGAAGTCATCAATA 58.083 42.857 10.83 0.00 42.54 1.90
3764 5502 3.706373 TTCAGCAGCCTCCCCGAC 61.706 66.667 0.00 0.00 0.00 4.79
4328 6244 6.308766 GCAAGCAACTCTAACCAAAATATGTG 59.691 38.462 0.00 0.00 0.00 3.21
4577 6781 7.931948 GGTCAACTTATGCCTGTATATTGTAGT 59.068 37.037 0.00 0.00 0.00 2.73
4598 6802 7.447374 AGAACGTTCATTATCATTTGGTCAA 57.553 32.000 28.78 0.00 0.00 3.18
4671 6875 8.332996 AGAAATATGTTGCTCATATGGCTAAG 57.667 34.615 14.63 2.09 45.64 2.18
4728 6934 8.988064 TGAGAATATGACTAAGTTGAAGACAC 57.012 34.615 0.00 0.00 0.00 3.67
4752 6960 4.153296 TGTTTGCACAGGTTACATCGTATG 59.847 41.667 0.00 0.00 0.00 2.39
4849 7058 6.387192 TCTACTCCCATTTCCATTTTCTGA 57.613 37.500 0.00 0.00 0.00 3.27
5040 7249 4.518211 CCACACTTCTTCAGAATTTCAGCT 59.482 41.667 0.00 0.00 33.01 4.24
5405 7614 6.825213 TCCATACTCAGTTTTTGATGGATGAG 59.175 38.462 2.49 0.00 37.50 2.90
5409 7618 6.373005 TCTCCATACTCAGTTTTTGATGGA 57.627 37.500 6.16 6.16 39.20 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.