Multiple sequence alignment - TraesCS7D01G017500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G017500 chr7D 100.000 2771 0 0 1 2771 7594062 7591292 0.000000e+00 5118.0
1 TraesCS7D01G017500 chr7D 87.770 139 10 5 686 824 8066179 8066048 3.700000e-34 156.0
2 TraesCS7D01G017500 chr7D 84.828 145 17 4 631 770 8229142 8228998 1.030000e-29 141.0
3 TraesCS7D01G017500 chr7D 89.691 97 8 1 636 732 7498946 7499040 3.750000e-24 122.0
4 TraesCS7D01G017500 chr7D 87.255 102 13 0 631 732 8228105 8228004 1.740000e-22 117.0
5 TraesCS7D01G017500 chr5D 91.432 1879 141 10 904 2771 233727283 233729152 0.000000e+00 2560.0
6 TraesCS7D01G017500 chr5D 81.609 522 86 8 2247 2764 557511863 557511348 9.170000e-115 424.0
7 TraesCS7D01G017500 chr2B 90.240 1875 162 12 908 2771 236701186 236699322 0.000000e+00 2429.0
8 TraesCS7D01G017500 chr5A 90.679 1502 127 8 904 2396 428829568 428831065 0.000000e+00 1986.0
9 TraesCS7D01G017500 chr5A 92.689 383 27 1 2390 2771 428867546 428867928 4.030000e-153 551.0
10 TraesCS7D01G017500 chr5A 80.371 377 43 20 1 366 236882430 236882786 9.850000e-65 257.0
11 TraesCS7D01G017500 chr5A 83.621 116 16 3 2261 2375 502836556 502836443 3.770000e-19 106.0
12 TraesCS7D01G017500 chr1D 92.623 366 26 1 1 365 122902207 122901842 2.440000e-145 525.0
13 TraesCS7D01G017500 chr3B 90.736 367 31 3 1 366 549430288 549429924 1.150000e-133 486.0
14 TraesCS7D01G017500 chr3B 100.000 38 0 0 299 336 805563173 805563210 1.380000e-08 71.3
15 TraesCS7D01G017500 chr3B 97.297 37 1 0 356 392 549429757 549429721 2.300000e-06 63.9
16 TraesCS7D01G017500 chr4A 91.541 331 26 2 1 330 32095885 32095556 3.250000e-124 455.0
17 TraesCS7D01G017500 chr4A 86.111 108 15 0 630 737 732801321 732801428 1.740000e-22 117.0
18 TraesCS7D01G017500 chr4A 88.000 100 10 1 633 732 732818460 732818557 1.740000e-22 117.0
19 TraesCS7D01G017500 chr4A 87.755 98 9 2 636 732 731952581 731952486 8.110000e-21 111.0
20 TraesCS7D01G017500 chr6B 92.674 273 18 2 1 272 686514314 686514043 2.590000e-105 392.0
21 TraesCS7D01G017500 chr6A 91.701 241 19 1 1 240 444672311 444672071 1.590000e-87 333.0
22 TraesCS7D01G017500 chr4D 84.049 326 47 5 15 338 455780448 455780126 2.680000e-80 309.0
23 TraesCS7D01G017500 chr6D 91.414 198 15 1 43 240 307515236 307515041 1.260000e-68 270.0
24 TraesCS7D01G017500 chr2A 76.115 381 65 20 1 366 164756193 164755824 2.840000e-40 176.0
25 TraesCS7D01G017500 chr7B 74.640 347 65 20 1 336 735910262 735910596 6.230000e-27 132.0
26 TraesCS7D01G017500 chr7A 81.757 148 19 3 631 770 8421703 8421850 1.740000e-22 117.0
27 TraesCS7D01G017500 chr7A 90.698 86 7 1 631 715 8585089 8585004 2.260000e-21 113.0
28 TraesCS7D01G017500 chr7A 77.835 194 21 14 633 826 8502706 8502877 1.760000e-17 100.0
29 TraesCS7D01G017500 chr7A 80.508 118 21 2 220 336 10846891 10846775 3.800000e-14 89.8
30 TraesCS7D01G017500 chrUn 80.132 151 18 11 9 152 288172254 288172399 4.880000e-18 102.0
31 TraesCS7D01G017500 chrUn 80.132 151 18 11 9 152 291708106 291708251 4.880000e-18 102.0
32 TraesCS7D01G017500 chr4B 73.154 298 44 27 54 333 505090109 505090388 1.060000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G017500 chr7D 7591292 7594062 2770 True 5118.00 5118 100.0000 1 2771 1 chr7D.!!$R1 2770
1 TraesCS7D01G017500 chr5D 233727283 233729152 1869 False 2560.00 2560 91.4320 904 2771 1 chr5D.!!$F1 1867
2 TraesCS7D01G017500 chr5D 557511348 557511863 515 True 424.00 424 81.6090 2247 2764 1 chr5D.!!$R1 517
3 TraesCS7D01G017500 chr2B 236699322 236701186 1864 True 2429.00 2429 90.2400 908 2771 1 chr2B.!!$R1 1863
4 TraesCS7D01G017500 chr5A 428829568 428831065 1497 False 1986.00 1986 90.6790 904 2396 1 chr5A.!!$F2 1492
5 TraesCS7D01G017500 chr3B 549429721 549430288 567 True 274.95 486 94.0165 1 392 2 chr3B.!!$R1 391

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
818 996 0.03254 CACCTTGTTTTCAGCAGGGC 59.967 55.0 0.0 0.0 36.68 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1836 2027 0.252696 GCCCCCTCCCAAAAGGATTT 60.253 55.0 0.0 0.0 46.33 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.539139 GATTGCGTATCATTTCATTGATAGAAG 57.461 33.333 0.00 0.00 38.83 2.85
37 38 9.108284 TGCGTATCATTTCATTGATAGAAGAAA 57.892 29.630 0.00 0.00 38.83 2.52
74 75 1.597195 GAGACAACACATGCACGAACA 59.403 47.619 0.00 0.00 0.00 3.18
82 83 0.858583 CATGCACGAACACAAGACGA 59.141 50.000 0.00 0.00 0.00 4.20
141 143 4.899502 TCAGCCCAAACAAAGAAAAACAA 58.100 34.783 0.00 0.00 0.00 2.83
146 148 4.143009 CCCAAACAAAGAAAAACAACACGG 60.143 41.667 0.00 0.00 0.00 4.94
160 162 2.386661 ACACGGCATAACTCTCCAAG 57.613 50.000 0.00 0.00 0.00 3.61
165 167 1.673168 GCATAACTCTCCAAGCCCTG 58.327 55.000 0.00 0.00 0.00 4.45
179 181 0.320771 GCCCTGAGAAGCAACTCGAA 60.321 55.000 5.87 0.00 39.49 3.71
212 214 4.998051 ACAACCAACAAATCCTACTCCAT 58.002 39.130 0.00 0.00 0.00 3.41
214 216 5.222130 ACAACCAACAAATCCTACTCCATCT 60.222 40.000 0.00 0.00 0.00 2.90
216 218 5.501156 ACCAACAAATCCTACTCCATCTTC 58.499 41.667 0.00 0.00 0.00 2.87
222 224 1.041437 CCTACTCCATCTTCGGGGAC 58.959 60.000 0.00 0.00 0.00 4.46
241 243 1.406219 CGCCACGAGTGATCAAGACG 61.406 60.000 4.59 6.44 0.00 4.18
282 284 3.241177 GTCAAGGACGCCGTTGTC 58.759 61.111 4.11 0.00 38.78 3.18
283 285 1.593209 GTCAAGGACGCCGTTGTCA 60.593 57.895 4.11 0.00 40.72 3.58
297 299 1.488705 TTGTCATCCGGCCCAAGAGT 61.489 55.000 0.00 0.00 0.00 3.24
327 329 1.923356 GGTTTCCCCTGATGCTTGAA 58.077 50.000 0.00 0.00 0.00 2.69
333 335 0.106819 CCCTGATGCTTGAAGAGGGG 60.107 60.000 8.45 2.39 39.94 4.79
334 336 0.750911 CCTGATGCTTGAAGAGGGGC 60.751 60.000 0.00 0.00 0.00 5.80
338 340 2.105766 GATGCTTGAAGAGGGGCAAAT 58.894 47.619 0.00 0.00 38.21 2.32
392 570 4.477975 GACGTCACCGGGAGAGCG 62.478 72.222 11.55 12.06 38.78 5.03
409 587 3.130160 GCGGGAGAGCAAGCCAAG 61.130 66.667 0.00 0.00 37.05 3.61
410 588 2.665000 CGGGAGAGCAAGCCAAGA 59.335 61.111 0.00 0.00 0.00 3.02
411 589 1.743252 CGGGAGAGCAAGCCAAGAC 60.743 63.158 0.00 0.00 0.00 3.01
412 590 1.377856 GGGAGAGCAAGCCAAGACC 60.378 63.158 0.00 0.00 0.00 3.85
413 591 1.743252 GGAGAGCAAGCCAAGACCG 60.743 63.158 0.00 0.00 0.00 4.79
414 592 2.359230 AGAGCAAGCCAAGACCGC 60.359 61.111 0.00 0.00 0.00 5.68
415 593 3.435186 GAGCAAGCCAAGACCGCC 61.435 66.667 0.00 0.00 0.00 6.13
441 619 2.873288 GGCAAGCCGAAGAAGCTG 59.127 61.111 0.00 0.00 40.49 4.24
442 620 2.694760 GGCAAGCCGAAGAAGCTGG 61.695 63.158 0.00 0.00 40.49 4.85
443 621 1.672356 GCAAGCCGAAGAAGCTGGA 60.672 57.895 0.00 0.00 40.49 3.86
444 622 1.237285 GCAAGCCGAAGAAGCTGGAA 61.237 55.000 0.00 0.00 40.49 3.53
445 623 0.519077 CAAGCCGAAGAAGCTGGAAC 59.481 55.000 0.00 0.00 40.49 3.62
446 624 0.108585 AAGCCGAAGAAGCTGGAACA 59.891 50.000 0.00 0.00 40.49 3.18
457 635 3.236391 TGGAACAGGGACGCAACT 58.764 55.556 0.00 0.00 0.00 3.16
458 636 1.070786 TGGAACAGGGACGCAACTC 59.929 57.895 0.00 0.00 0.00 3.01
459 637 1.671379 GGAACAGGGACGCAACTCC 60.671 63.158 0.00 0.00 0.00 3.85
460 638 1.371558 GAACAGGGACGCAACTCCT 59.628 57.895 0.00 0.00 0.00 3.69
462 640 2.046892 CAGGGACGCAACTCCTGG 60.047 66.667 0.00 0.00 43.09 4.45
463 641 2.203788 AGGGACGCAACTCCTGGA 60.204 61.111 0.00 0.00 0.00 3.86
464 642 2.266055 GGGACGCAACTCCTGGAG 59.734 66.667 22.00 22.00 35.52 3.86
465 643 2.584391 GGGACGCAACTCCTGGAGT 61.584 63.158 23.49 23.49 45.64 3.85
475 653 1.747709 CTCCTGGAGTTTGGAGCATG 58.252 55.000 15.76 0.00 42.62 4.06
476 654 1.004044 CTCCTGGAGTTTGGAGCATGT 59.996 52.381 15.76 0.00 42.62 3.21
477 655 1.003580 TCCTGGAGTTTGGAGCATGTC 59.996 52.381 0.00 0.00 0.00 3.06
478 656 1.081892 CTGGAGTTTGGAGCATGTCG 58.918 55.000 0.00 0.00 0.00 4.35
479 657 0.321564 TGGAGTTTGGAGCATGTCGG 60.322 55.000 0.00 0.00 0.00 4.79
480 658 1.648467 GGAGTTTGGAGCATGTCGGC 61.648 60.000 0.00 0.00 0.00 5.54
481 659 1.648467 GAGTTTGGAGCATGTCGGCC 61.648 60.000 0.00 0.00 0.00 6.13
482 660 2.745884 TTTGGAGCATGTCGGCCG 60.746 61.111 22.12 22.12 0.00 6.13
489 667 4.854924 CATGTCGGCCGCCATGGA 62.855 66.667 35.28 9.74 42.00 3.41
490 668 4.108299 ATGTCGGCCGCCATGGAA 62.108 61.111 22.67 0.00 42.00 3.53
491 669 3.636929 ATGTCGGCCGCCATGGAAA 62.637 57.895 22.67 0.00 42.00 3.13
492 670 3.059386 GTCGGCCGCCATGGAAAA 61.059 61.111 23.51 0.00 42.00 2.29
493 671 3.059386 TCGGCCGCCATGGAAAAC 61.059 61.111 23.51 0.36 42.00 2.43
494 672 3.061848 CGGCCGCCATGGAAAACT 61.062 61.111 18.40 0.00 42.00 2.66
495 673 2.635443 CGGCCGCCATGGAAAACTT 61.635 57.895 18.40 0.00 42.00 2.66
496 674 1.079888 GGCCGCCATGGAAAACTTG 60.080 57.895 18.40 0.00 42.00 3.16
497 675 1.737735 GCCGCCATGGAAAACTTGC 60.738 57.895 18.40 2.32 42.00 4.01
498 676 1.444212 CCGCCATGGAAAACTTGCG 60.444 57.895 18.40 8.92 42.00 4.85
499 677 2.088178 CGCCATGGAAAACTTGCGC 61.088 57.895 18.40 0.00 0.00 6.09
500 678 1.737735 GCCATGGAAAACTTGCGCC 60.738 57.895 18.40 0.00 0.00 6.53
501 679 1.664873 CCATGGAAAACTTGCGCCA 59.335 52.632 5.56 0.00 34.45 5.69
502 680 0.247185 CCATGGAAAACTTGCGCCAT 59.753 50.000 5.56 0.00 41.61 4.40
503 681 1.632422 CATGGAAAACTTGCGCCATC 58.368 50.000 4.18 0.00 39.01 3.51
504 682 1.067706 CATGGAAAACTTGCGCCATCA 60.068 47.619 4.18 0.00 39.01 3.07
505 683 0.313672 TGGAAAACTTGCGCCATCAC 59.686 50.000 4.18 0.00 0.00 3.06
506 684 0.598065 GGAAAACTTGCGCCATCACT 59.402 50.000 4.18 0.00 0.00 3.41
507 685 1.666888 GGAAAACTTGCGCCATCACTG 60.667 52.381 4.18 0.00 0.00 3.66
508 686 0.318955 AAAACTTGCGCCATCACTGC 60.319 50.000 4.18 0.00 0.00 4.40
509 687 1.454572 AAACTTGCGCCATCACTGCA 61.455 50.000 4.18 0.00 36.72 4.41
510 688 1.246056 AACTTGCGCCATCACTGCAT 61.246 50.000 4.18 0.00 38.60 3.96
511 689 1.063649 CTTGCGCCATCACTGCATC 59.936 57.895 4.18 0.00 38.60 3.91
512 690 1.374343 CTTGCGCCATCACTGCATCT 61.374 55.000 4.18 0.00 38.60 2.90
513 691 0.961857 TTGCGCCATCACTGCATCTT 60.962 50.000 4.18 0.00 38.60 2.40
514 692 1.063649 GCGCCATCACTGCATCTTG 59.936 57.895 0.00 0.00 0.00 3.02
515 693 1.063649 CGCCATCACTGCATCTTGC 59.936 57.895 0.00 0.00 45.29 4.01
599 777 3.429141 CAGGAGCAGCCAACGCAG 61.429 66.667 0.00 0.00 40.02 5.18
600 778 4.711949 AGGAGCAGCCAACGCAGG 62.712 66.667 0.00 0.00 40.02 4.85
601 779 4.704833 GGAGCAGCCAACGCAGGA 62.705 66.667 0.00 0.00 37.52 3.86
602 780 3.123620 GAGCAGCCAACGCAGGAG 61.124 66.667 0.00 0.00 37.52 3.69
631 809 3.948702 GGAGACCAGAGGAGGAGC 58.051 66.667 0.00 0.00 0.00 4.70
632 810 2.124693 GGAGACCAGAGGAGGAGCG 61.125 68.421 0.00 0.00 0.00 5.03
633 811 2.757917 AGACCAGAGGAGGAGCGC 60.758 66.667 0.00 0.00 0.00 5.92
634 812 2.757917 GACCAGAGGAGGAGCGCT 60.758 66.667 11.27 11.27 0.00 5.92
635 813 2.757917 ACCAGAGGAGGAGCGCTC 60.758 66.667 29.38 29.38 0.00 5.03
636 814 2.441901 CCAGAGGAGGAGCGCTCT 60.442 66.667 34.46 21.46 0.00 4.09
637 815 2.057408 CCAGAGGAGGAGCGCTCTT 61.057 63.158 34.46 29.44 0.00 2.85
638 816 0.753479 CCAGAGGAGGAGCGCTCTTA 60.753 60.000 34.46 0.00 0.00 2.10
639 817 1.327303 CAGAGGAGGAGCGCTCTTAT 58.673 55.000 34.46 20.50 0.00 1.73
640 818 1.000385 CAGAGGAGGAGCGCTCTTATG 60.000 57.143 34.46 20.01 0.00 1.90
641 819 1.133637 AGAGGAGGAGCGCTCTTATGA 60.134 52.381 34.46 0.00 0.00 2.15
642 820 1.683917 GAGGAGGAGCGCTCTTATGAA 59.316 52.381 34.46 0.00 0.00 2.57
643 821 2.298729 GAGGAGGAGCGCTCTTATGAAT 59.701 50.000 34.46 15.59 0.00 2.57
644 822 2.703007 AGGAGGAGCGCTCTTATGAATT 59.297 45.455 34.46 11.70 0.00 2.17
645 823 2.805099 GGAGGAGCGCTCTTATGAATTG 59.195 50.000 34.46 0.00 0.00 2.32
646 824 2.805099 GAGGAGCGCTCTTATGAATTGG 59.195 50.000 34.46 0.00 0.00 3.16
647 825 1.876156 GGAGCGCTCTTATGAATTGGG 59.124 52.381 34.46 0.00 0.00 4.12
648 826 1.876156 GAGCGCTCTTATGAATTGGGG 59.124 52.381 29.88 0.00 0.00 4.96
649 827 1.212935 AGCGCTCTTATGAATTGGGGT 59.787 47.619 2.64 0.00 0.00 4.95
650 828 1.334869 GCGCTCTTATGAATTGGGGTG 59.665 52.381 0.00 0.00 0.00 4.61
651 829 1.949525 CGCTCTTATGAATTGGGGTGG 59.050 52.381 0.00 0.00 0.00 4.61
652 830 2.683742 CGCTCTTATGAATTGGGGTGGT 60.684 50.000 0.00 0.00 0.00 4.16
653 831 3.365472 GCTCTTATGAATTGGGGTGGTT 58.635 45.455 0.00 0.00 0.00 3.67
654 832 4.532834 GCTCTTATGAATTGGGGTGGTTA 58.467 43.478 0.00 0.00 0.00 2.85
655 833 4.338400 GCTCTTATGAATTGGGGTGGTTAC 59.662 45.833 0.00 0.00 0.00 2.50
656 834 5.505780 CTCTTATGAATTGGGGTGGTTACA 58.494 41.667 0.00 0.00 0.00 2.41
657 835 6.086011 TCTTATGAATTGGGGTGGTTACAT 57.914 37.500 0.00 0.00 0.00 2.29
658 836 6.498538 TCTTATGAATTGGGGTGGTTACATT 58.501 36.000 0.00 0.00 0.00 2.71
659 837 7.644062 TCTTATGAATTGGGGTGGTTACATTA 58.356 34.615 0.00 0.00 0.00 1.90
660 838 8.116669 TCTTATGAATTGGGGTGGTTACATTAA 58.883 33.333 0.00 0.00 0.00 1.40
661 839 6.790232 ATGAATTGGGGTGGTTACATTAAG 57.210 37.500 0.00 0.00 0.00 1.85
662 840 4.464597 TGAATTGGGGTGGTTACATTAAGC 59.535 41.667 0.00 0.00 36.74 3.09
663 841 3.818295 TTGGGGTGGTTACATTAAGCT 57.182 42.857 0.00 0.00 37.10 3.74
664 842 4.931027 TTGGGGTGGTTACATTAAGCTA 57.069 40.909 0.00 0.00 37.10 3.32
665 843 4.931027 TGGGGTGGTTACATTAAGCTAA 57.069 40.909 0.00 0.00 37.10 3.09
666 844 4.850680 TGGGGTGGTTACATTAAGCTAAG 58.149 43.478 0.00 0.00 37.10 2.18
667 845 3.630769 GGGGTGGTTACATTAAGCTAAGC 59.369 47.826 0.00 0.00 37.10 3.09
668 846 3.630769 GGGTGGTTACATTAAGCTAAGCC 59.369 47.826 0.00 0.00 37.10 4.35
669 847 4.266714 GGTGGTTACATTAAGCTAAGCCA 58.733 43.478 0.00 0.00 37.10 4.75
670 848 4.887655 GGTGGTTACATTAAGCTAAGCCAT 59.112 41.667 0.00 0.00 37.10 4.40
671 849 5.221048 GGTGGTTACATTAAGCTAAGCCATG 60.221 44.000 0.00 0.00 37.10 3.66
672 850 5.357032 GTGGTTACATTAAGCTAAGCCATGT 59.643 40.000 0.00 0.00 37.10 3.21
673 851 5.356751 TGGTTACATTAAGCTAAGCCATGTG 59.643 40.000 0.00 0.00 37.10 3.21
674 852 5.221048 GGTTACATTAAGCTAAGCCATGTGG 60.221 44.000 0.00 0.00 34.25 4.17
675 853 3.290710 ACATTAAGCTAAGCCATGTGGG 58.709 45.455 0.54 0.00 40.85 4.61
676 854 3.053693 ACATTAAGCTAAGCCATGTGGGA 60.054 43.478 0.54 0.00 40.01 4.37
677 855 2.710096 TAAGCTAAGCCATGTGGGAC 57.290 50.000 0.54 0.00 40.01 4.46
678 856 0.995024 AAGCTAAGCCATGTGGGACT 59.005 50.000 0.54 0.00 40.01 3.85
679 857 1.879575 AGCTAAGCCATGTGGGACTA 58.120 50.000 0.54 0.00 40.01 2.59
680 858 2.196595 AGCTAAGCCATGTGGGACTAA 58.803 47.619 0.54 0.00 40.01 2.24
681 859 2.576191 AGCTAAGCCATGTGGGACTAAA 59.424 45.455 0.54 0.00 40.01 1.85
682 860 3.010138 AGCTAAGCCATGTGGGACTAAAA 59.990 43.478 0.54 0.00 40.01 1.52
683 861 3.761752 GCTAAGCCATGTGGGACTAAAAA 59.238 43.478 0.54 0.00 40.01 1.94
684 862 4.402474 GCTAAGCCATGTGGGACTAAAAAT 59.598 41.667 0.54 0.00 40.01 1.82
685 863 5.105351 GCTAAGCCATGTGGGACTAAAAATT 60.105 40.000 0.54 0.00 40.01 1.82
686 864 6.096282 GCTAAGCCATGTGGGACTAAAAATTA 59.904 38.462 0.54 0.00 40.01 1.40
687 865 5.914898 AGCCATGTGGGACTAAAAATTAC 57.085 39.130 0.54 0.00 40.01 1.89
688 866 5.580022 AGCCATGTGGGACTAAAAATTACT 58.420 37.500 0.54 0.00 40.01 2.24
689 867 6.016555 AGCCATGTGGGACTAAAAATTACTT 58.983 36.000 0.54 0.00 40.01 2.24
690 868 6.152831 AGCCATGTGGGACTAAAAATTACTTC 59.847 38.462 0.54 0.00 40.01 3.01
691 869 6.152831 GCCATGTGGGACTAAAAATTACTTCT 59.847 38.462 0.54 0.00 40.01 2.85
692 870 7.628580 GCCATGTGGGACTAAAAATTACTTCTC 60.629 40.741 0.54 0.00 40.01 2.87
693 871 7.611855 CCATGTGGGACTAAAAATTACTTCTCT 59.388 37.037 0.00 0.00 40.01 3.10
694 872 7.979444 TGTGGGACTAAAAATTACTTCTCTG 57.021 36.000 0.00 0.00 0.00 3.35
695 873 7.514721 TGTGGGACTAAAAATTACTTCTCTGT 58.485 34.615 0.00 0.00 0.00 3.41
696 874 7.660208 TGTGGGACTAAAAATTACTTCTCTGTC 59.340 37.037 0.00 0.00 0.00 3.51
697 875 6.872020 TGGGACTAAAAATTACTTCTCTGTCG 59.128 38.462 0.00 0.00 0.00 4.35
698 876 6.313164 GGGACTAAAAATTACTTCTCTGTCGG 59.687 42.308 0.00 0.00 0.00 4.79
699 877 6.872547 GGACTAAAAATTACTTCTCTGTCGGT 59.127 38.462 0.00 0.00 0.00 4.69
700 878 7.387122 GGACTAAAAATTACTTCTCTGTCGGTT 59.613 37.037 0.00 0.00 0.00 4.44
701 879 8.084590 ACTAAAAATTACTTCTCTGTCGGTTG 57.915 34.615 0.00 0.00 0.00 3.77
702 880 6.937436 AAAAATTACTTCTCTGTCGGTTGT 57.063 33.333 0.00 0.00 0.00 3.32
703 881 6.937436 AAAATTACTTCTCTGTCGGTTGTT 57.063 33.333 0.00 0.00 0.00 2.83
704 882 6.541111 AAATTACTTCTCTGTCGGTTGTTC 57.459 37.500 0.00 0.00 0.00 3.18
705 883 2.135664 ACTTCTCTGTCGGTTGTTCG 57.864 50.000 0.00 0.00 0.00 3.95
706 884 1.407979 ACTTCTCTGTCGGTTGTTCGT 59.592 47.619 0.00 0.00 0.00 3.85
707 885 2.159142 ACTTCTCTGTCGGTTGTTCGTT 60.159 45.455 0.00 0.00 0.00 3.85
708 886 2.129823 TCTCTGTCGGTTGTTCGTTC 57.870 50.000 0.00 0.00 0.00 3.95
709 887 0.776451 CTCTGTCGGTTGTTCGTTCG 59.224 55.000 0.00 0.00 0.00 3.95
710 888 0.595567 TCTGTCGGTTGTTCGTTCGG 60.596 55.000 0.00 0.00 0.00 4.30
711 889 0.872881 CTGTCGGTTGTTCGTTCGGT 60.873 55.000 0.00 0.00 0.00 4.69
712 890 0.459934 TGTCGGTTGTTCGTTCGGTT 60.460 50.000 0.00 0.00 0.00 4.44
713 891 0.230515 GTCGGTTGTTCGTTCGGTTC 59.769 55.000 0.00 0.00 0.00 3.62
714 892 0.179116 TCGGTTGTTCGTTCGGTTCA 60.179 50.000 0.00 0.00 0.00 3.18
715 893 0.042794 CGGTTGTTCGTTCGGTTCAC 60.043 55.000 0.00 0.00 0.00 3.18
716 894 1.008329 GGTTGTTCGTTCGGTTCACA 58.992 50.000 0.00 0.00 0.00 3.58
717 895 1.600485 GGTTGTTCGTTCGGTTCACAT 59.400 47.619 0.00 0.00 0.00 3.21
718 896 2.601266 GGTTGTTCGTTCGGTTCACATG 60.601 50.000 0.00 0.00 0.00 3.21
719 897 0.584396 TGTTCGTTCGGTTCACATGC 59.416 50.000 0.00 0.00 0.00 4.06
720 898 0.450482 GTTCGTTCGGTTCACATGCG 60.450 55.000 0.00 0.00 0.00 4.73
721 899 1.561717 TTCGTTCGGTTCACATGCGG 61.562 55.000 0.00 0.00 0.00 5.69
722 900 2.175811 GTTCGGTTCACATGCGGC 59.824 61.111 0.00 0.00 0.00 6.53
723 901 3.418913 TTCGGTTCACATGCGGCG 61.419 61.111 0.51 0.51 0.00 6.46
724 902 4.673298 TCGGTTCACATGCGGCGT 62.673 61.111 9.37 0.00 0.00 5.68
725 903 2.766875 TTCGGTTCACATGCGGCGTA 62.767 55.000 9.37 3.65 0.00 4.42
726 904 2.171079 CGGTTCACATGCGGCGTAT 61.171 57.895 9.37 6.74 0.00 3.06
727 905 1.351707 GGTTCACATGCGGCGTATG 59.648 57.895 31.54 31.54 0.00 2.39
728 906 1.366111 GGTTCACATGCGGCGTATGT 61.366 55.000 32.86 32.86 39.29 2.29
730 908 3.485110 CACATGCGGCGTATGTGT 58.515 55.556 42.83 25.61 46.31 3.72
731 909 1.060779 CACATGCGGCGTATGTGTG 59.939 57.895 42.83 30.65 46.31 3.82
732 910 2.023181 CATGCGGCGTATGTGTGC 59.977 61.111 26.57 0.00 0.00 4.57
733 911 3.563088 ATGCGGCGTATGTGTGCG 61.563 61.111 10.33 0.00 36.47 5.34
739 917 4.467084 CGTATGTGTGCGGGCCCT 62.467 66.667 22.43 0.36 0.00 5.19
740 918 2.513897 GTATGTGTGCGGGCCCTC 60.514 66.667 22.43 13.90 0.00 4.30
741 919 2.687200 TATGTGTGCGGGCCCTCT 60.687 61.111 22.43 0.00 0.00 3.69
742 920 2.731571 TATGTGTGCGGGCCCTCTC 61.732 63.158 22.43 14.19 0.00 3.20
744 922 4.459089 GTGTGCGGGCCCTCTCTC 62.459 72.222 22.43 10.32 0.00 3.20
749 927 3.075005 CGGGCCCTCTCTCGGAAA 61.075 66.667 22.43 0.00 0.00 3.13
750 928 2.904131 GGGCCCTCTCTCGGAAAG 59.096 66.667 17.04 0.00 0.00 2.62
751 929 2.188207 GGCCCTCTCTCGGAAAGC 59.812 66.667 0.00 0.00 0.00 3.51
752 930 2.188207 GCCCTCTCTCGGAAAGCC 59.812 66.667 0.00 0.00 0.00 4.35
753 931 2.660064 GCCCTCTCTCGGAAAGCCA 61.660 63.158 0.00 0.00 0.00 4.75
754 932 1.519719 CCCTCTCTCGGAAAGCCAG 59.480 63.158 0.00 0.00 0.00 4.85
755 933 0.972983 CCCTCTCTCGGAAAGCCAGA 60.973 60.000 0.00 0.00 0.00 3.86
756 934 0.898320 CCTCTCTCGGAAAGCCAGAA 59.102 55.000 0.00 0.00 0.00 3.02
757 935 1.134848 CCTCTCTCGGAAAGCCAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
758 936 0.247736 TCTCTCGGAAAGCCAGAAGC 59.752 55.000 0.00 0.00 44.25 3.86
759 937 0.742635 CTCTCGGAAAGCCAGAAGCC 60.743 60.000 0.00 0.00 45.47 4.35
760 938 1.194781 TCTCGGAAAGCCAGAAGCCT 61.195 55.000 0.00 0.00 45.47 4.58
761 939 0.322008 CTCGGAAAGCCAGAAGCCTT 60.322 55.000 0.00 0.00 45.47 4.35
762 940 0.981183 TCGGAAAGCCAGAAGCCTTA 59.019 50.000 0.00 0.00 45.47 2.69
763 941 1.087501 CGGAAAGCCAGAAGCCTTAC 58.912 55.000 0.00 0.00 45.47 2.34
764 942 1.464734 GGAAAGCCAGAAGCCTTACC 58.535 55.000 0.00 0.00 45.47 2.85
765 943 1.271926 GGAAAGCCAGAAGCCTTACCA 60.272 52.381 0.00 0.00 45.47 3.25
766 944 2.621668 GGAAAGCCAGAAGCCTTACCAT 60.622 50.000 0.00 0.00 45.47 3.55
767 945 2.134789 AAGCCAGAAGCCTTACCATG 57.865 50.000 0.00 0.00 45.47 3.66
768 946 1.289160 AGCCAGAAGCCTTACCATGA 58.711 50.000 0.00 0.00 45.47 3.07
769 947 1.065126 AGCCAGAAGCCTTACCATGAC 60.065 52.381 0.00 0.00 45.47 3.06
770 948 1.340017 GCCAGAAGCCTTACCATGACA 60.340 52.381 0.00 0.00 34.35 3.58
771 949 2.684927 GCCAGAAGCCTTACCATGACAT 60.685 50.000 0.00 0.00 34.35 3.06
772 950 3.433598 GCCAGAAGCCTTACCATGACATA 60.434 47.826 0.00 0.00 34.35 2.29
773 951 4.384056 CCAGAAGCCTTACCATGACATAG 58.616 47.826 0.00 0.00 0.00 2.23
774 952 4.141620 CCAGAAGCCTTACCATGACATAGT 60.142 45.833 0.00 0.00 0.00 2.12
775 953 4.813161 CAGAAGCCTTACCATGACATAGTG 59.187 45.833 0.00 0.00 0.00 2.74
776 954 3.845781 AGCCTTACCATGACATAGTGG 57.154 47.619 0.00 0.00 41.35 4.00
777 955 2.158755 AGCCTTACCATGACATAGTGGC 60.159 50.000 7.11 7.11 39.13 5.01
778 956 2.851195 CCTTACCATGACATAGTGGCC 58.149 52.381 0.00 0.00 39.13 5.36
779 957 2.487265 CCTTACCATGACATAGTGGCCC 60.487 54.545 0.00 0.00 39.13 5.80
780 958 1.886422 TACCATGACATAGTGGCCCA 58.114 50.000 0.00 0.00 39.13 5.36
781 959 1.225373 ACCATGACATAGTGGCCCAT 58.775 50.000 0.00 0.00 39.13 4.00
782 960 2.417652 ACCATGACATAGTGGCCCATA 58.582 47.619 0.00 0.00 39.13 2.74
783 961 2.106511 ACCATGACATAGTGGCCCATAC 59.893 50.000 0.00 0.00 39.13 2.39
784 962 2.416747 CATGACATAGTGGCCCATACG 58.583 52.381 0.00 0.00 0.00 3.06
785 963 1.491668 TGACATAGTGGCCCATACGT 58.508 50.000 0.00 0.00 0.00 3.57
786 964 1.411246 TGACATAGTGGCCCATACGTC 59.589 52.381 0.00 1.58 0.00 4.34
787 965 1.411246 GACATAGTGGCCCATACGTCA 59.589 52.381 0.00 0.00 0.00 4.35
788 966 1.412710 ACATAGTGGCCCATACGTCAG 59.587 52.381 0.00 0.00 0.00 3.51
789 967 1.412710 CATAGTGGCCCATACGTCAGT 59.587 52.381 0.00 0.00 0.00 3.41
790 968 0.821517 TAGTGGCCCATACGTCAGTG 59.178 55.000 0.00 0.00 0.00 3.66
791 969 0.902984 AGTGGCCCATACGTCAGTGA 60.903 55.000 0.00 0.00 0.00 3.41
792 970 0.036765 GTGGCCCATACGTCAGTGAA 60.037 55.000 0.00 0.00 0.00 3.18
793 971 0.249120 TGGCCCATACGTCAGTGAAG 59.751 55.000 0.00 4.37 0.00 3.02
794 972 0.462047 GGCCCATACGTCAGTGAAGG 60.462 60.000 10.89 1.08 0.00 3.46
795 973 1.090052 GCCCATACGTCAGTGAAGGC 61.090 60.000 10.89 5.58 34.40 4.35
796 974 0.462047 CCCATACGTCAGTGAAGGCC 60.462 60.000 10.89 0.00 0.00 5.19
797 975 0.462047 CCATACGTCAGTGAAGGCCC 60.462 60.000 10.89 0.00 0.00 5.80
798 976 0.249120 CATACGTCAGTGAAGGCCCA 59.751 55.000 10.89 0.00 0.00 5.36
799 977 0.249398 ATACGTCAGTGAAGGCCCAC 59.751 55.000 10.89 0.42 37.32 4.61
800 978 1.116536 TACGTCAGTGAAGGCCCACA 61.117 55.000 13.76 5.21 39.42 4.17
801 979 1.961277 CGTCAGTGAAGGCCCACAC 60.961 63.158 18.47 18.47 39.42 3.82
802 980 1.600916 GTCAGTGAAGGCCCACACC 60.601 63.158 21.25 7.36 39.42 4.16
803 981 1.770110 TCAGTGAAGGCCCACACCT 60.770 57.895 21.25 9.90 43.91 4.00
810 988 2.820845 AGGCCCACACCTTGTTTTC 58.179 52.632 0.00 0.00 36.28 2.29
811 989 0.032615 AGGCCCACACCTTGTTTTCA 60.033 50.000 0.00 0.00 36.28 2.69
812 990 0.389025 GGCCCACACCTTGTTTTCAG 59.611 55.000 0.00 0.00 0.00 3.02
813 991 0.249447 GCCCACACCTTGTTTTCAGC 60.249 55.000 0.00 0.00 0.00 4.26
814 992 1.110442 CCCACACCTTGTTTTCAGCA 58.890 50.000 0.00 0.00 0.00 4.41
815 993 1.067516 CCCACACCTTGTTTTCAGCAG 59.932 52.381 0.00 0.00 0.00 4.24
816 994 1.067516 CCACACCTTGTTTTCAGCAGG 59.932 52.381 0.00 0.00 34.81 4.85
817 995 1.067516 CACACCTTGTTTTCAGCAGGG 59.932 52.381 0.00 0.00 38.80 4.45
818 996 0.032540 CACCTTGTTTTCAGCAGGGC 59.967 55.000 0.00 0.00 36.68 5.19
819 997 0.396974 ACCTTGTTTTCAGCAGGGCA 60.397 50.000 0.00 0.00 36.68 5.36
820 998 0.032540 CCTTGTTTTCAGCAGGGCAC 59.967 55.000 0.00 0.00 0.00 5.01
821 999 0.746063 CTTGTTTTCAGCAGGGCACA 59.254 50.000 0.00 0.00 0.00 4.57
822 1000 1.136695 CTTGTTTTCAGCAGGGCACAA 59.863 47.619 0.00 0.00 0.00 3.33
823 1001 0.459489 TGTTTTCAGCAGGGCACAAC 59.541 50.000 0.00 0.00 0.00 3.32
824 1002 0.746659 GTTTTCAGCAGGGCACAACT 59.253 50.000 0.00 0.00 0.00 3.16
825 1003 1.032014 TTTTCAGCAGGGCACAACTC 58.968 50.000 0.00 0.00 0.00 3.01
826 1004 0.183492 TTTCAGCAGGGCACAACTCT 59.817 50.000 0.00 0.00 0.00 3.24
827 1005 0.535780 TTCAGCAGGGCACAACTCTG 60.536 55.000 0.00 0.00 0.00 3.35
828 1006 1.071987 CAGCAGGGCACAACTCTGA 59.928 57.895 0.00 0.00 0.00 3.27
829 1007 0.322277 CAGCAGGGCACAACTCTGAT 60.322 55.000 0.00 0.00 0.00 2.90
830 1008 0.035630 AGCAGGGCACAACTCTGATC 60.036 55.000 0.00 0.00 0.00 2.92
831 1009 1.028868 GCAGGGCACAACTCTGATCC 61.029 60.000 0.00 0.00 0.00 3.36
832 1010 0.742281 CAGGGCACAACTCTGATCCG 60.742 60.000 0.00 0.00 0.00 4.18
833 1011 1.194781 AGGGCACAACTCTGATCCGT 61.195 55.000 0.00 0.00 0.00 4.69
834 1012 0.741221 GGGCACAACTCTGATCCGTC 60.741 60.000 0.00 0.00 0.00 4.79
835 1013 0.247736 GGCACAACTCTGATCCGTCT 59.752 55.000 0.00 0.00 0.00 4.18
836 1014 1.476891 GGCACAACTCTGATCCGTCTA 59.523 52.381 0.00 0.00 0.00 2.59
837 1015 2.531206 GCACAACTCTGATCCGTCTAC 58.469 52.381 0.00 0.00 0.00 2.59
838 1016 2.094700 GCACAACTCTGATCCGTCTACA 60.095 50.000 0.00 0.00 0.00 2.74
839 1017 3.502920 CACAACTCTGATCCGTCTACAC 58.497 50.000 0.00 0.00 0.00 2.90
840 1018 3.057526 CACAACTCTGATCCGTCTACACA 60.058 47.826 0.00 0.00 0.00 3.72
841 1019 3.764434 ACAACTCTGATCCGTCTACACAT 59.236 43.478 0.00 0.00 0.00 3.21
842 1020 4.948004 ACAACTCTGATCCGTCTACACATA 59.052 41.667 0.00 0.00 0.00 2.29
843 1021 5.594725 ACAACTCTGATCCGTCTACACATAT 59.405 40.000 0.00 0.00 0.00 1.78
844 1022 5.950758 ACTCTGATCCGTCTACACATATC 57.049 43.478 0.00 0.00 0.00 1.63
845 1023 5.626142 ACTCTGATCCGTCTACACATATCT 58.374 41.667 0.00 0.00 0.00 1.98
846 1024 5.471797 ACTCTGATCCGTCTACACATATCTG 59.528 44.000 0.00 0.00 0.00 2.90
847 1025 5.377478 TCTGATCCGTCTACACATATCTGT 58.623 41.667 0.00 0.00 35.44 3.41
848 1026 5.470437 TCTGATCCGTCTACACATATCTGTC 59.530 44.000 0.00 0.00 31.62 3.51
849 1027 5.377478 TGATCCGTCTACACATATCTGTCT 58.623 41.667 0.00 0.00 31.62 3.41
850 1028 5.470437 TGATCCGTCTACACATATCTGTCTC 59.530 44.000 0.00 0.00 31.62 3.36
851 1029 5.037383 TCCGTCTACACATATCTGTCTCT 57.963 43.478 0.00 0.00 31.62 3.10
852 1030 6.170846 TCCGTCTACACATATCTGTCTCTA 57.829 41.667 0.00 0.00 31.62 2.43
853 1031 6.770542 TCCGTCTACACATATCTGTCTCTAT 58.229 40.000 0.00 0.00 31.62 1.98
854 1032 6.874664 TCCGTCTACACATATCTGTCTCTATC 59.125 42.308 0.00 0.00 31.62 2.08
855 1033 6.092944 CCGTCTACACATATCTGTCTCTATCC 59.907 46.154 0.00 0.00 31.62 2.59
856 1034 6.183360 CGTCTACACATATCTGTCTCTATCCG 60.183 46.154 0.00 0.00 31.62 4.18
857 1035 6.651643 GTCTACACATATCTGTCTCTATCCGT 59.348 42.308 0.00 0.00 31.62 4.69
858 1036 5.950758 ACACATATCTGTCTCTATCCGTC 57.049 43.478 0.00 0.00 31.62 4.79
859 1037 4.762765 ACACATATCTGTCTCTATCCGTCC 59.237 45.833 0.00 0.00 31.62 4.79
860 1038 5.007034 CACATATCTGTCTCTATCCGTCCT 58.993 45.833 0.00 0.00 31.62 3.85
861 1039 5.007034 ACATATCTGTCTCTATCCGTCCTG 58.993 45.833 0.00 0.00 0.00 3.86
862 1040 2.350057 TCTGTCTCTATCCGTCCTGG 57.650 55.000 0.00 0.00 40.09 4.45
863 1041 1.564818 TCTGTCTCTATCCGTCCTGGT 59.435 52.381 0.00 0.00 39.52 4.00
864 1042 1.678627 CTGTCTCTATCCGTCCTGGTG 59.321 57.143 0.00 0.00 39.52 4.17
865 1043 0.386113 GTCTCTATCCGTCCTGGTGC 59.614 60.000 0.00 0.00 39.52 5.01
866 1044 0.755698 TCTCTATCCGTCCTGGTGCC 60.756 60.000 0.00 0.00 39.52 5.01
867 1045 1.749334 CTCTATCCGTCCTGGTGCCC 61.749 65.000 0.00 0.00 39.52 5.36
868 1046 2.766651 TATCCGTCCTGGTGCCCC 60.767 66.667 0.00 0.00 39.52 5.80
888 1066 4.462280 CCGCCTACCACGAACCCC 62.462 72.222 0.00 0.00 0.00 4.95
889 1067 4.462280 CGCCTACCACGAACCCCC 62.462 72.222 0.00 0.00 0.00 5.40
890 1068 3.324108 GCCTACCACGAACCCCCA 61.324 66.667 0.00 0.00 0.00 4.96
891 1069 2.987125 CCTACCACGAACCCCCAG 59.013 66.667 0.00 0.00 0.00 4.45
892 1070 2.666098 CCTACCACGAACCCCCAGG 61.666 68.421 0.00 0.00 40.04 4.45
893 1071 3.324108 TACCACGAACCCCCAGGC 61.324 66.667 0.00 0.00 36.11 4.85
899 1077 4.785453 GAACCCCCAGGCGCAGAG 62.785 72.222 10.83 0.00 36.11 3.35
910 1088 0.519077 GGCGCAGAGGAAGTTTTCTG 59.481 55.000 10.83 11.84 42.87 3.02
961 1147 1.591863 GCCCTATCGCCGTGAGTTC 60.592 63.158 0.00 0.00 0.00 3.01
962 1148 2.017559 GCCCTATCGCCGTGAGTTCT 62.018 60.000 0.00 0.00 0.00 3.01
963 1149 0.460311 CCCTATCGCCGTGAGTTCTT 59.540 55.000 0.00 0.00 0.00 2.52
972 1158 2.572290 CCGTGAGTTCTTTTCTGGGTT 58.428 47.619 0.00 0.00 0.00 4.11
978 1164 4.040461 TGAGTTCTTTTCTGGGTTCGATCT 59.960 41.667 0.00 0.00 0.00 2.75
1010 1196 2.393989 GCGATCGCGATGGAGACAGA 62.394 60.000 31.59 0.00 40.61 3.41
1029 1215 2.373169 AGATGAAGGAAGTGGTTCTGCA 59.627 45.455 0.00 0.00 32.72 4.41
1080 1266 5.768980 TTCACCTCCATGAAGAAGAAGAT 57.231 39.130 0.00 0.00 33.62 2.40
1091 1277 2.979240 AGAAGAAGATGAGGGTTTCGC 58.021 47.619 0.00 0.00 0.00 4.70
1138 1324 3.850098 AAGGTCAAGTGGCTGGCGG 62.850 63.158 0.00 0.00 0.00 6.13
1140 1326 3.357079 GTCAAGTGGCTGGCGGTG 61.357 66.667 0.00 0.00 0.00 4.94
1158 1344 2.244651 GGCGAAAGTGCACACGTCT 61.245 57.895 21.04 0.00 36.28 4.18
1227 1413 2.725221 ATCCTGCAAAGGAGGTGATC 57.275 50.000 4.46 0.00 41.88 2.92
1272 1458 0.534877 TCACAGTGCAATTCGGCTGT 60.535 50.000 0.00 0.00 42.18 4.40
1353 1539 3.261643 TGATGATGGAGGAATATGACGGG 59.738 47.826 0.00 0.00 0.00 5.28
1372 1558 1.768510 GTTCGCTAACCCTAGATCGC 58.231 55.000 0.00 0.00 0.00 4.58
1383 1569 2.168521 CCCTAGATCGCTGGTCTTGAAA 59.831 50.000 0.00 0.00 0.00 2.69
1407 1593 0.179020 TCACAGTTTGGGCTCAGGTG 60.179 55.000 4.05 4.05 0.00 4.00
1431 1617 4.758165 CACAAGTTACCGGACAATTACCTT 59.242 41.667 9.46 0.00 0.00 3.50
1474 1661 3.092511 GCAGGCCCATGGGAGAGA 61.093 66.667 36.00 0.00 37.50 3.10
1482 1669 3.075134 GGCCCATGGGAGAGATTAAAGAT 59.925 47.826 36.00 0.00 37.50 2.40
1506 1694 0.692419 AGATCAAGATCCCAGCGGGT 60.692 55.000 12.46 1.94 44.74 5.28
1532 1720 3.071479 TGGGCAAATTCGTCAGAGTAAC 58.929 45.455 0.00 0.00 0.00 2.50
1608 1799 3.314693 TGAGAAGGAGTGGTACCAAGTT 58.685 45.455 18.31 7.58 0.00 2.66
1650 1841 4.039488 ACGTTATGTGGTTTCTGTGGTCTA 59.961 41.667 0.00 0.00 0.00 2.59
1675 1866 0.109153 ACACTGGCATGAAGAGTGCA 59.891 50.000 15.36 0.00 44.25 4.57
1683 1874 1.134367 CATGAAGAGTGCAGCAATGGG 59.866 52.381 0.00 0.00 0.00 4.00
1723 1914 4.603610 CCCTGGAGTGGGGAGATTTTATAT 59.396 45.833 0.00 0.00 46.50 0.86
1728 1919 5.385198 GAGTGGGGAGATTTTATATTGGCA 58.615 41.667 0.00 0.00 0.00 4.92
1740 1931 0.106708 TATTGGCAGATGGAGGACGC 59.893 55.000 0.00 0.00 0.00 5.19
1743 1934 4.899239 GCAGATGGAGGACGCGGG 62.899 72.222 12.47 0.00 0.00 6.13
1768 1959 2.285743 GAGGAAGGGGTGGAGGCT 60.286 66.667 0.00 0.00 0.00 4.58
1769 1960 1.003051 GAGGAAGGGGTGGAGGCTA 59.997 63.158 0.00 0.00 0.00 3.93
1790 1981 1.306997 GACCAGGGGGACCATCAGA 60.307 63.158 0.00 0.00 40.34 3.27
1824 2015 2.821679 CTTTTGGGAGGGGTCGAGCC 62.822 65.000 25.56 25.56 0.00 4.70
1836 2027 2.954318 GGGTCGAGCCACTAATACAGTA 59.046 50.000 28.27 0.00 39.65 2.74
1880 2071 1.725557 GCTGATGGTGCAGATGCTGG 61.726 60.000 6.35 0.00 42.66 4.85
1899 2090 0.637743 GAGGAGGTAGAGGAAGGGGT 59.362 60.000 0.00 0.00 0.00 4.95
1908 2099 3.715648 AGAGGAAGGGGTGAGTATGAT 57.284 47.619 0.00 0.00 0.00 2.45
1913 2104 3.714798 GGAAGGGGTGAGTATGATTACCA 59.285 47.826 0.00 0.00 34.89 3.25
1936 2127 1.154225 CCGTGGCGTTTCAATGCTC 60.154 57.895 3.81 0.00 40.71 4.26
1943 2134 1.533625 CGTTTCAATGCTCTGGGGAA 58.466 50.000 0.00 0.00 0.00 3.97
1947 2138 2.978156 TCAATGCTCTGGGGAAAGTT 57.022 45.000 0.00 0.00 0.00 2.66
1956 2147 1.427753 CTGGGGAAAGTTAACCCTGGT 59.572 52.381 14.10 0.00 44.97 4.00
1980 2171 1.545428 GGTCAGACCAATCAACCAGCA 60.545 52.381 15.43 0.00 38.42 4.41
2014 2205 2.819608 GGTGTGCTTGGCAAGAGAATAA 59.180 45.455 30.45 6.42 41.47 1.40
2079 2270 4.790937 TGGAATCAAAGCTATATGGTGCA 58.209 39.130 0.00 0.00 0.00 4.57
2121 2312 2.289382 TGCGGCTAACACAGAAGATGAA 60.289 45.455 0.00 0.00 0.00 2.57
2133 2324 4.158579 ACAGAAGATGAAGATCTGCGTGTA 59.841 41.667 0.00 0.00 43.41 2.90
2142 2333 0.981183 ATCTGCGTGTAGGGGAAACA 59.019 50.000 0.00 0.00 0.00 2.83
2145 2336 1.873863 GCGTGTAGGGGAAACAAGC 59.126 57.895 0.00 0.00 43.22 4.01
2157 2348 0.250901 AAACAAGCGTGGCTGATCCT 60.251 50.000 4.26 0.00 39.62 3.24
2172 2363 3.584406 CTGATCCTATGAGCACCCCATAA 59.416 47.826 0.00 0.00 32.50 1.90
2215 2406 1.967066 CTAGGGCTGAGGATGGTACTG 59.033 57.143 0.00 0.00 0.00 2.74
2407 2598 5.304614 TGTGCCTAGTAGAAACTCAACTTCT 59.695 40.000 0.00 0.00 37.15 2.85
2474 2665 6.749923 AAATCGTTCTCGGTTAGTAGTAGT 57.250 37.500 0.00 0.00 39.62 2.73
2489 2680 1.132817 AGTAGTGGAAGGAGTGGTGGT 60.133 52.381 0.00 0.00 0.00 4.16
2507 2698 7.039993 AGTGGTGGTATTGTAATCTTTTGGAAC 60.040 37.037 0.00 0.00 0.00 3.62
2554 2746 9.856488 TCTAGTTACTCGAAATATCATATTGGC 57.144 33.333 0.00 0.00 0.00 4.52
2563 2755 1.609208 ATCATATTGGCGCAAGGGTC 58.391 50.000 10.83 0.00 38.28 4.46
2607 2799 4.482990 TGGAGGCTCTCATGTGTATATGA 58.517 43.478 15.23 0.00 35.83 2.15
2621 2813 0.595053 ATATGACGAAGCGCAGGTCG 60.595 55.000 21.64 21.64 37.06 4.79
2671 2863 0.793861 GTAATTTGGCAGCGACGACA 59.206 50.000 0.00 0.00 0.00 4.35
2680 2872 3.681835 GCGACGACAGGTGACCCT 61.682 66.667 0.00 0.00 44.02 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.276590 TCTTCTATCAATGAAATGATACGCAAT 57.723 29.630 0.00 0.00 40.44 3.56
34 35 9.436957 TTGTCTCATACCTTGTATTCTCTTTTC 57.563 33.333 0.00 0.00 0.00 2.29
37 38 7.819900 GTGTTGTCTCATACCTTGTATTCTCTT 59.180 37.037 0.00 0.00 0.00 2.85
55 56 1.330521 GTGTTCGTGCATGTGTTGTCT 59.669 47.619 5.68 0.00 0.00 3.41
74 75 2.416747 CACCATGTCATGTCGTCTTGT 58.583 47.619 11.84 0.00 0.00 3.16
141 143 1.676014 GCTTGGAGAGTTATGCCGTGT 60.676 52.381 0.00 0.00 0.00 4.49
146 148 1.210478 TCAGGGCTTGGAGAGTTATGC 59.790 52.381 0.00 0.00 0.00 3.14
160 162 0.320771 TTCGAGTTGCTTCTCAGGGC 60.321 55.000 8.81 0.00 34.46 5.19
165 167 4.495422 TCATTAGGTTCGAGTTGCTTCTC 58.505 43.478 0.00 0.00 0.00 2.87
179 181 6.015434 GGATTTGTTGGTTGTCTTCATTAGGT 60.015 38.462 0.00 0.00 0.00 3.08
222 224 1.406219 CGTCTTGATCACTCGTGGCG 61.406 60.000 0.00 0.00 0.00 5.69
227 229 1.134530 GGCGTCGTCTTGATCACTCG 61.135 60.000 0.00 0.73 0.00 4.18
279 281 1.488705 AACTCTTGGGCCGGATGACA 61.489 55.000 5.05 0.00 0.00 3.58
282 284 1.815421 CGAACTCTTGGGCCGGATG 60.815 63.158 5.05 0.00 0.00 3.51
283 285 2.584608 CGAACTCTTGGGCCGGAT 59.415 61.111 5.05 0.00 0.00 4.18
289 291 0.824759 CCTAGGTCCGAACTCTTGGG 59.175 60.000 0.00 0.00 0.00 4.12
324 326 2.580322 TCCACATATTTGCCCCTCTTCA 59.420 45.455 0.00 0.00 0.00 3.02
327 329 1.215423 GGTCCACATATTTGCCCCTCT 59.785 52.381 0.00 0.00 0.00 3.69
333 335 1.755959 TGCCATGGTCCACATATTTGC 59.244 47.619 14.67 0.00 37.84 3.68
334 336 3.734597 CGTTGCCATGGTCCACATATTTG 60.735 47.826 14.67 0.00 37.84 2.32
338 340 1.029408 GCGTTGCCATGGTCCACATA 61.029 55.000 14.67 0.00 37.84 2.29
392 570 3.130160 CTTGGCTTGCTCTCCCGC 61.130 66.667 0.00 0.00 0.00 6.13
393 571 1.743252 GTCTTGGCTTGCTCTCCCG 60.743 63.158 0.00 0.00 0.00 5.14
394 572 1.377856 GGTCTTGGCTTGCTCTCCC 60.378 63.158 0.00 0.00 0.00 4.30
395 573 1.743252 CGGTCTTGGCTTGCTCTCC 60.743 63.158 0.00 0.00 0.00 3.71
396 574 2.394563 GCGGTCTTGGCTTGCTCTC 61.395 63.158 0.00 0.00 0.00 3.20
397 575 2.359230 GCGGTCTTGGCTTGCTCT 60.359 61.111 0.00 0.00 0.00 4.09
398 576 3.435186 GGCGGTCTTGGCTTGCTC 61.435 66.667 0.00 0.00 0.00 4.26
418 596 3.423154 CTTCGGCTTGCCGGTGTC 61.423 66.667 29.94 0.00 0.00 3.67
419 597 3.469863 TTCTTCGGCTTGCCGGTGT 62.470 57.895 29.94 0.00 0.00 4.16
420 598 2.668212 TTCTTCGGCTTGCCGGTG 60.668 61.111 29.94 22.39 0.00 4.94
421 599 2.358737 CTTCTTCGGCTTGCCGGT 60.359 61.111 29.94 0.00 0.00 5.28
422 600 3.804193 GCTTCTTCGGCTTGCCGG 61.804 66.667 29.94 17.20 0.00 6.13
423 601 2.743928 AGCTTCTTCGGCTTGCCG 60.744 61.111 26.01 26.01 36.56 5.69
424 602 2.694760 CCAGCTTCTTCGGCTTGCC 61.695 63.158 0.75 0.75 38.03 4.52
425 603 1.237285 TTCCAGCTTCTTCGGCTTGC 61.237 55.000 0.00 0.00 38.03 4.01
426 604 0.519077 GTTCCAGCTTCTTCGGCTTG 59.481 55.000 0.00 0.00 38.03 4.01
427 605 0.108585 TGTTCCAGCTTCTTCGGCTT 59.891 50.000 0.00 0.00 38.03 4.35
428 606 0.321122 CTGTTCCAGCTTCTTCGGCT 60.321 55.000 0.00 0.00 41.07 5.52
429 607 1.301677 CCTGTTCCAGCTTCTTCGGC 61.302 60.000 0.00 0.00 0.00 5.54
430 608 0.674895 CCCTGTTCCAGCTTCTTCGG 60.675 60.000 0.00 0.00 0.00 4.30
431 609 0.321671 TCCCTGTTCCAGCTTCTTCG 59.678 55.000 0.00 0.00 0.00 3.79
432 610 1.814793 GTCCCTGTTCCAGCTTCTTC 58.185 55.000 0.00 0.00 0.00 2.87
433 611 0.035458 CGTCCCTGTTCCAGCTTCTT 59.965 55.000 0.00 0.00 0.00 2.52
434 612 1.674057 CGTCCCTGTTCCAGCTTCT 59.326 57.895 0.00 0.00 0.00 2.85
435 613 2.035442 GCGTCCCTGTTCCAGCTTC 61.035 63.158 0.00 0.00 0.00 3.86
436 614 2.032681 GCGTCCCTGTTCCAGCTT 59.967 61.111 0.00 0.00 0.00 3.74
437 615 2.818169 TTGCGTCCCTGTTCCAGCT 61.818 57.895 0.00 0.00 0.00 4.24
438 616 2.281484 TTGCGTCCCTGTTCCAGC 60.281 61.111 0.00 0.00 0.00 4.85
439 617 0.951040 GAGTTGCGTCCCTGTTCCAG 60.951 60.000 0.00 0.00 0.00 3.86
440 618 1.070786 GAGTTGCGTCCCTGTTCCA 59.929 57.895 0.00 0.00 0.00 3.53
441 619 1.671379 GGAGTTGCGTCCCTGTTCC 60.671 63.158 0.00 0.00 0.00 3.62
442 620 0.951040 CAGGAGTTGCGTCCCTGTTC 60.951 60.000 0.00 0.00 41.81 3.18
443 621 1.071471 CAGGAGTTGCGTCCCTGTT 59.929 57.895 0.00 0.00 41.81 3.16
444 622 2.743718 CAGGAGTTGCGTCCCTGT 59.256 61.111 0.00 0.00 41.81 4.00
445 623 2.046892 CCAGGAGTTGCGTCCCTG 60.047 66.667 0.00 0.00 45.28 4.45
446 624 2.203788 TCCAGGAGTTGCGTCCCT 60.204 61.111 0.00 0.00 37.31 4.20
447 625 2.266055 CTCCAGGAGTTGCGTCCC 59.734 66.667 8.54 0.00 37.31 4.46
448 626 3.060866 ACTCCAGGAGTTGCGTCC 58.939 61.111 17.31 0.00 40.28 4.79
457 635 1.003580 GACATGCTCCAAACTCCAGGA 59.996 52.381 0.00 0.00 0.00 3.86
458 636 1.457346 GACATGCTCCAAACTCCAGG 58.543 55.000 0.00 0.00 0.00 4.45
459 637 1.081892 CGACATGCTCCAAACTCCAG 58.918 55.000 0.00 0.00 0.00 3.86
460 638 0.321564 CCGACATGCTCCAAACTCCA 60.322 55.000 0.00 0.00 0.00 3.86
461 639 1.648467 GCCGACATGCTCCAAACTCC 61.648 60.000 0.00 0.00 0.00 3.85
462 640 1.648467 GGCCGACATGCTCCAAACTC 61.648 60.000 0.00 0.00 0.00 3.01
463 641 1.675641 GGCCGACATGCTCCAAACT 60.676 57.895 0.00 0.00 0.00 2.66
464 642 2.877691 GGCCGACATGCTCCAAAC 59.122 61.111 0.00 0.00 0.00 2.93
465 643 2.745884 CGGCCGACATGCTCCAAA 60.746 61.111 24.07 0.00 0.00 3.28
473 651 3.636929 TTTCCATGGCGGCCGACAT 62.637 57.895 40.70 40.70 46.28 3.06
474 652 3.851897 TTTTCCATGGCGGCCGACA 62.852 57.895 39.99 39.99 37.65 4.35
475 653 3.059386 TTTTCCATGGCGGCCGAC 61.059 61.111 33.48 31.04 33.14 4.79
476 654 3.059386 GTTTTCCATGGCGGCCGA 61.059 61.111 33.48 9.86 33.14 5.54
477 655 2.635443 AAGTTTTCCATGGCGGCCG 61.635 57.895 24.05 24.05 33.14 6.13
478 656 1.079888 CAAGTTTTCCATGGCGGCC 60.080 57.895 13.32 13.32 33.14 6.13
479 657 1.737735 GCAAGTTTTCCATGGCGGC 60.738 57.895 6.96 0.00 33.14 6.53
480 658 1.444212 CGCAAGTTTTCCATGGCGG 60.444 57.895 6.96 0.00 40.70 6.13
481 659 2.088178 GCGCAAGTTTTCCATGGCG 61.088 57.895 6.96 5.56 46.47 5.69
482 660 1.737735 GGCGCAAGTTTTCCATGGC 60.738 57.895 10.83 0.00 41.68 4.40
483 661 0.247185 ATGGCGCAAGTTTTCCATGG 59.753 50.000 10.83 4.97 37.87 3.66
484 662 1.067706 TGATGGCGCAAGTTTTCCATG 60.068 47.619 10.83 0.00 39.25 3.66
485 663 1.067635 GTGATGGCGCAAGTTTTCCAT 60.068 47.619 10.83 0.00 41.63 3.41
486 664 0.313672 GTGATGGCGCAAGTTTTCCA 59.686 50.000 10.83 0.00 41.68 3.53
487 665 0.598065 AGTGATGGCGCAAGTTTTCC 59.402 50.000 10.83 0.00 41.68 3.13
488 666 1.689959 CAGTGATGGCGCAAGTTTTC 58.310 50.000 10.83 0.00 41.68 2.29
489 667 0.318955 GCAGTGATGGCGCAAGTTTT 60.319 50.000 10.83 0.00 41.68 2.43
490 668 1.286880 GCAGTGATGGCGCAAGTTT 59.713 52.632 10.83 0.00 41.68 2.66
491 669 1.246056 ATGCAGTGATGGCGCAAGTT 61.246 50.000 10.83 0.00 39.48 2.66
492 670 1.651240 GATGCAGTGATGGCGCAAGT 61.651 55.000 10.83 0.00 39.48 3.16
493 671 1.063649 GATGCAGTGATGGCGCAAG 59.936 57.895 10.83 0.00 39.48 4.01
494 672 0.961857 AAGATGCAGTGATGGCGCAA 60.962 50.000 10.83 0.00 39.48 4.85
495 673 1.377594 AAGATGCAGTGATGGCGCA 60.378 52.632 10.83 0.00 40.50 6.09
496 674 1.063649 CAAGATGCAGTGATGGCGC 59.936 57.895 0.00 0.00 0.00 6.53
497 675 1.063649 GCAAGATGCAGTGATGGCG 59.936 57.895 0.00 0.00 44.26 5.69
498 676 1.063649 CGCAAGATGCAGTGATGGC 59.936 57.895 2.99 0.00 45.36 4.40
499 677 1.063649 GCGCAAGATGCAGTGATGG 59.936 57.895 0.30 0.00 45.36 3.51
500 678 1.297378 CGCGCAAGATGCAGTGATG 60.297 57.895 8.75 0.00 45.36 3.07
501 679 2.466982 CCGCGCAAGATGCAGTGAT 61.467 57.895 8.75 0.00 45.36 3.06
502 680 3.120385 CCGCGCAAGATGCAGTGA 61.120 61.111 8.75 0.00 45.36 3.41
503 681 4.170062 CCCGCGCAAGATGCAGTG 62.170 66.667 8.75 2.62 45.36 3.66
582 760 3.429141 CTGCGTTGGCTGCTCCTG 61.429 66.667 0.00 0.00 40.82 3.86
583 761 4.711949 CCTGCGTTGGCTGCTCCT 62.712 66.667 0.00 0.00 40.82 3.69
584 762 4.704833 TCCTGCGTTGGCTGCTCC 62.705 66.667 0.00 0.00 40.82 4.70
585 763 3.123620 CTCCTGCGTTGGCTGCTC 61.124 66.667 0.00 0.00 40.82 4.26
605 783 4.785453 CTGGTCTCCCTTGGCGGC 62.785 72.222 0.00 0.00 0.00 6.53
606 784 3.003173 TCTGGTCTCCCTTGGCGG 61.003 66.667 0.00 0.00 0.00 6.13
607 785 2.581354 CTCTGGTCTCCCTTGGCG 59.419 66.667 0.00 0.00 0.00 5.69
608 786 1.613630 TCCTCTGGTCTCCCTTGGC 60.614 63.158 0.00 0.00 0.00 4.52
609 787 0.980231 CCTCCTCTGGTCTCCCTTGG 60.980 65.000 0.00 0.00 0.00 3.61
610 788 0.041833 TCCTCCTCTGGTCTCCCTTG 59.958 60.000 0.00 0.00 0.00 3.61
611 789 0.338120 CTCCTCCTCTGGTCTCCCTT 59.662 60.000 0.00 0.00 0.00 3.95
612 790 2.015081 CTCCTCCTCTGGTCTCCCT 58.985 63.158 0.00 0.00 0.00 4.20
613 791 1.760480 GCTCCTCCTCTGGTCTCCC 60.760 68.421 0.00 0.00 0.00 4.30
614 792 2.124693 CGCTCCTCCTCTGGTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
615 793 2.781158 GCGCTCCTCCTCTGGTCTC 61.781 68.421 0.00 0.00 0.00 3.36
616 794 2.757917 GCGCTCCTCCTCTGGTCT 60.758 66.667 0.00 0.00 0.00 3.85
617 795 2.757917 AGCGCTCCTCCTCTGGTC 60.758 66.667 2.64 0.00 0.00 4.02
618 796 2.757917 GAGCGCTCCTCCTCTGGT 60.758 66.667 27.22 0.00 34.35 4.00
619 797 0.753479 TAAGAGCGCTCCTCCTCTGG 60.753 60.000 32.94 0.00 41.74 3.86
620 798 1.000385 CATAAGAGCGCTCCTCCTCTG 60.000 57.143 32.94 17.60 41.74 3.35
621 799 1.133637 TCATAAGAGCGCTCCTCCTCT 60.134 52.381 32.94 11.52 41.74 3.69
622 800 1.323412 TCATAAGAGCGCTCCTCCTC 58.677 55.000 32.94 9.05 41.74 3.71
623 801 1.781786 TTCATAAGAGCGCTCCTCCT 58.218 50.000 32.94 17.58 41.74 3.69
624 802 2.805099 CAATTCATAAGAGCGCTCCTCC 59.195 50.000 32.94 10.03 41.74 4.30
625 803 2.805099 CCAATTCATAAGAGCGCTCCTC 59.195 50.000 32.94 10.72 41.07 3.71
626 804 2.486191 CCCAATTCATAAGAGCGCTCCT 60.486 50.000 32.94 23.77 0.00 3.69
627 805 1.876156 CCCAATTCATAAGAGCGCTCC 59.124 52.381 32.94 15.76 0.00 4.70
628 806 1.876156 CCCCAATTCATAAGAGCGCTC 59.124 52.381 30.01 30.01 0.00 5.03
629 807 1.212935 ACCCCAATTCATAAGAGCGCT 59.787 47.619 11.27 11.27 0.00 5.92
630 808 1.334869 CACCCCAATTCATAAGAGCGC 59.665 52.381 0.00 0.00 0.00 5.92
631 809 1.949525 CCACCCCAATTCATAAGAGCG 59.050 52.381 0.00 0.00 0.00 5.03
632 810 3.018423 ACCACCCCAATTCATAAGAGC 57.982 47.619 0.00 0.00 0.00 4.09
633 811 5.505780 TGTAACCACCCCAATTCATAAGAG 58.494 41.667 0.00 0.00 0.00 2.85
634 812 5.522315 TGTAACCACCCCAATTCATAAGA 57.478 39.130 0.00 0.00 0.00 2.10
635 813 6.790232 AATGTAACCACCCCAATTCATAAG 57.210 37.500 0.00 0.00 0.00 1.73
636 814 7.147811 GCTTAATGTAACCACCCCAATTCATAA 60.148 37.037 0.00 0.00 0.00 1.90
637 815 6.322712 GCTTAATGTAACCACCCCAATTCATA 59.677 38.462 0.00 0.00 0.00 2.15
638 816 5.128663 GCTTAATGTAACCACCCCAATTCAT 59.871 40.000 0.00 0.00 0.00 2.57
639 817 4.464597 GCTTAATGTAACCACCCCAATTCA 59.535 41.667 0.00 0.00 0.00 2.57
640 818 4.709886 AGCTTAATGTAACCACCCCAATTC 59.290 41.667 0.00 0.00 0.00 2.17
641 819 4.683643 AGCTTAATGTAACCACCCCAATT 58.316 39.130 0.00 0.00 0.00 2.32
642 820 4.331159 AGCTTAATGTAACCACCCCAAT 57.669 40.909 0.00 0.00 0.00 3.16
643 821 3.818295 AGCTTAATGTAACCACCCCAA 57.182 42.857 0.00 0.00 0.00 4.12
644 822 4.850680 CTTAGCTTAATGTAACCACCCCA 58.149 43.478 0.00 0.00 0.00 4.96
645 823 3.630769 GCTTAGCTTAATGTAACCACCCC 59.369 47.826 0.00 0.00 0.00 4.95
646 824 3.630769 GGCTTAGCTTAATGTAACCACCC 59.369 47.826 3.59 0.00 0.00 4.61
647 825 4.266714 TGGCTTAGCTTAATGTAACCACC 58.733 43.478 3.59 0.00 0.00 4.61
648 826 5.357032 ACATGGCTTAGCTTAATGTAACCAC 59.643 40.000 15.19 0.00 30.27 4.16
649 827 5.356751 CACATGGCTTAGCTTAATGTAACCA 59.643 40.000 15.93 0.00 30.64 3.67
650 828 5.221048 CCACATGGCTTAGCTTAATGTAACC 60.221 44.000 15.93 0.00 30.64 2.85
651 829 5.221048 CCCACATGGCTTAGCTTAATGTAAC 60.221 44.000 15.93 0.00 30.64 2.50
652 830 4.887071 CCCACATGGCTTAGCTTAATGTAA 59.113 41.667 15.93 0.00 30.64 2.41
653 831 4.165180 TCCCACATGGCTTAGCTTAATGTA 59.835 41.667 15.93 3.93 30.64 2.29
654 832 3.053693 TCCCACATGGCTTAGCTTAATGT 60.054 43.478 3.59 9.23 31.38 2.71
655 833 3.316308 GTCCCACATGGCTTAGCTTAATG 59.684 47.826 3.59 8.61 0.00 1.90
656 834 3.203040 AGTCCCACATGGCTTAGCTTAAT 59.797 43.478 3.59 0.00 0.00 1.40
657 835 2.576191 AGTCCCACATGGCTTAGCTTAA 59.424 45.455 3.59 0.00 0.00 1.85
658 836 2.196595 AGTCCCACATGGCTTAGCTTA 58.803 47.619 3.59 0.00 0.00 3.09
659 837 0.995024 AGTCCCACATGGCTTAGCTT 59.005 50.000 3.59 0.00 0.00 3.74
660 838 1.879575 TAGTCCCACATGGCTTAGCT 58.120 50.000 3.59 0.00 0.00 3.32
661 839 2.710096 TTAGTCCCACATGGCTTAGC 57.290 50.000 0.00 0.00 0.00 3.09
662 840 6.530019 AATTTTTAGTCCCACATGGCTTAG 57.470 37.500 0.00 0.00 0.00 2.18
663 841 7.179269 AGTAATTTTTAGTCCCACATGGCTTA 58.821 34.615 0.00 0.00 0.00 3.09
664 842 6.016555 AGTAATTTTTAGTCCCACATGGCTT 58.983 36.000 0.00 0.00 0.00 4.35
665 843 5.580022 AGTAATTTTTAGTCCCACATGGCT 58.420 37.500 0.00 0.00 0.00 4.75
666 844 5.914898 AGTAATTTTTAGTCCCACATGGC 57.085 39.130 0.00 0.00 0.00 4.40
667 845 7.611855 AGAGAAGTAATTTTTAGTCCCACATGG 59.388 37.037 0.00 0.00 0.00 3.66
668 846 8.454106 CAGAGAAGTAATTTTTAGTCCCACATG 58.546 37.037 0.00 0.00 0.00 3.21
669 847 8.164070 ACAGAGAAGTAATTTTTAGTCCCACAT 58.836 33.333 0.00 0.00 0.00 3.21
670 848 7.514721 ACAGAGAAGTAATTTTTAGTCCCACA 58.485 34.615 0.00 0.00 0.00 4.17
671 849 7.148623 CGACAGAGAAGTAATTTTTAGTCCCAC 60.149 40.741 0.00 0.00 0.00 4.61
672 850 6.872020 CGACAGAGAAGTAATTTTTAGTCCCA 59.128 38.462 0.00 0.00 0.00 4.37
673 851 6.313164 CCGACAGAGAAGTAATTTTTAGTCCC 59.687 42.308 0.00 0.00 0.00 4.46
674 852 6.872547 ACCGACAGAGAAGTAATTTTTAGTCC 59.127 38.462 0.00 0.00 0.00 3.85
675 853 7.886405 ACCGACAGAGAAGTAATTTTTAGTC 57.114 36.000 0.00 0.00 0.00 2.59
676 854 7.713942 ACAACCGACAGAGAAGTAATTTTTAGT 59.286 33.333 0.00 0.00 0.00 2.24
677 855 8.084590 ACAACCGACAGAGAAGTAATTTTTAG 57.915 34.615 0.00 0.00 0.00 1.85
678 856 8.441312 AACAACCGACAGAGAAGTAATTTTTA 57.559 30.769 0.00 0.00 0.00 1.52
679 857 6.937436 ACAACCGACAGAGAAGTAATTTTT 57.063 33.333 0.00 0.00 0.00 1.94
680 858 6.292703 CGAACAACCGACAGAGAAGTAATTTT 60.293 38.462 0.00 0.00 0.00 1.82
681 859 5.176958 CGAACAACCGACAGAGAAGTAATTT 59.823 40.000 0.00 0.00 0.00 1.82
682 860 4.684703 CGAACAACCGACAGAGAAGTAATT 59.315 41.667 0.00 0.00 0.00 1.40
683 861 4.235360 CGAACAACCGACAGAGAAGTAAT 58.765 43.478 0.00 0.00 0.00 1.89
684 862 3.067180 ACGAACAACCGACAGAGAAGTAA 59.933 43.478 0.00 0.00 0.00 2.24
685 863 2.620115 ACGAACAACCGACAGAGAAGTA 59.380 45.455 0.00 0.00 0.00 2.24
686 864 1.407979 ACGAACAACCGACAGAGAAGT 59.592 47.619 0.00 0.00 0.00 3.01
687 865 2.135664 ACGAACAACCGACAGAGAAG 57.864 50.000 0.00 0.00 0.00 2.85
688 866 2.466846 GAACGAACAACCGACAGAGAA 58.533 47.619 0.00 0.00 0.00 2.87
689 867 1.598676 CGAACGAACAACCGACAGAGA 60.599 52.381 0.00 0.00 0.00 3.10
690 868 0.776451 CGAACGAACAACCGACAGAG 59.224 55.000 0.00 0.00 0.00 3.35
691 869 0.595567 CCGAACGAACAACCGACAGA 60.596 55.000 0.00 0.00 0.00 3.41
692 870 0.872881 ACCGAACGAACAACCGACAG 60.873 55.000 0.00 0.00 0.00 3.51
693 871 0.459934 AACCGAACGAACAACCGACA 60.460 50.000 0.00 0.00 0.00 4.35
694 872 0.230515 GAACCGAACGAACAACCGAC 59.769 55.000 0.00 0.00 0.00 4.79
695 873 0.179116 TGAACCGAACGAACAACCGA 60.179 50.000 0.00 0.00 0.00 4.69
696 874 0.042794 GTGAACCGAACGAACAACCG 60.043 55.000 0.00 0.00 0.00 4.44
697 875 1.008329 TGTGAACCGAACGAACAACC 58.992 50.000 0.00 0.00 0.00 3.77
698 876 2.635444 CATGTGAACCGAACGAACAAC 58.365 47.619 0.00 0.00 0.00 3.32
699 877 1.003331 GCATGTGAACCGAACGAACAA 60.003 47.619 0.00 0.00 0.00 2.83
700 878 0.584396 GCATGTGAACCGAACGAACA 59.416 50.000 0.00 0.00 0.00 3.18
701 879 0.450482 CGCATGTGAACCGAACGAAC 60.450 55.000 0.00 0.00 0.00 3.95
702 880 1.561717 CCGCATGTGAACCGAACGAA 61.562 55.000 8.11 0.00 0.00 3.85
703 881 2.024868 CCGCATGTGAACCGAACGA 61.025 57.895 8.11 0.00 0.00 3.85
704 882 2.474266 CCGCATGTGAACCGAACG 59.526 61.111 8.11 0.00 0.00 3.95
705 883 2.175811 GCCGCATGTGAACCGAAC 59.824 61.111 8.11 0.00 0.00 3.95
706 884 2.766875 TACGCCGCATGTGAACCGAA 62.767 55.000 8.11 0.00 0.00 4.30
707 885 2.566057 ATACGCCGCATGTGAACCGA 62.566 55.000 8.11 0.00 0.00 4.69
708 886 2.171079 ATACGCCGCATGTGAACCG 61.171 57.895 8.11 9.80 0.00 4.44
709 887 1.351707 CATACGCCGCATGTGAACC 59.648 57.895 8.11 0.00 0.00 3.62
710 888 2.086510 ACATACGCCGCATGTGAAC 58.913 52.632 8.11 0.00 35.33 3.18
711 889 4.608032 ACATACGCCGCATGTGAA 57.392 50.000 8.11 0.00 35.33 3.18
714 892 2.749865 GCACACATACGCCGCATGT 61.750 57.895 0.00 0.00 37.09 3.21
715 893 2.023181 GCACACATACGCCGCATG 59.977 61.111 0.00 0.00 0.00 4.06
716 894 3.563088 CGCACACATACGCCGCAT 61.563 61.111 0.00 0.00 0.00 4.73
722 900 4.467084 AGGGCCCGCACACATACG 62.467 66.667 18.44 0.00 0.00 3.06
723 901 2.513897 GAGGGCCCGCACACATAC 60.514 66.667 22.24 0.00 0.00 2.39
724 902 2.687200 AGAGGGCCCGCACACATA 60.687 61.111 28.68 0.00 0.00 2.29
725 903 4.101448 GAGAGGGCCCGCACACAT 62.101 66.667 28.68 6.03 0.00 3.21
727 905 4.459089 GAGAGAGGGCCCGCACAC 62.459 72.222 28.68 16.52 0.00 3.82
732 910 3.075005 TTTCCGAGAGAGGGCCCG 61.075 66.667 18.44 2.37 0.00 6.13
733 911 2.904131 CTTTCCGAGAGAGGGCCC 59.096 66.667 16.46 16.46 0.00 5.80
734 912 2.188207 GCTTTCCGAGAGAGGGCC 59.812 66.667 0.00 0.00 0.00 5.80
735 913 2.188207 GGCTTTCCGAGAGAGGGC 59.812 66.667 0.00 0.00 0.00 5.19
736 914 0.972983 TCTGGCTTTCCGAGAGAGGG 60.973 60.000 0.00 0.00 34.14 4.30
737 915 0.898320 TTCTGGCTTTCCGAGAGAGG 59.102 55.000 0.00 0.00 34.14 3.69
738 916 1.738700 GCTTCTGGCTTTCCGAGAGAG 60.739 57.143 0.00 0.00 38.06 3.20
739 917 0.247736 GCTTCTGGCTTTCCGAGAGA 59.752 55.000 0.00 0.00 38.06 3.10
740 918 0.742635 GGCTTCTGGCTTTCCGAGAG 60.743 60.000 0.00 0.00 41.46 3.20
741 919 1.296715 GGCTTCTGGCTTTCCGAGA 59.703 57.895 0.00 0.00 41.46 4.04
742 920 3.896479 GGCTTCTGGCTTTCCGAG 58.104 61.111 0.00 0.00 41.46 4.63
750 928 1.340017 TGTCATGGTAAGGCTTCTGGC 60.340 52.381 1.30 0.00 40.90 4.85
751 929 2.787473 TGTCATGGTAAGGCTTCTGG 57.213 50.000 1.30 0.00 0.00 3.86
752 930 4.813161 CACTATGTCATGGTAAGGCTTCTG 59.187 45.833 1.30 0.00 0.00 3.02
753 931 4.141620 CCACTATGTCATGGTAAGGCTTCT 60.142 45.833 1.30 0.00 0.00 2.85
754 932 4.130118 CCACTATGTCATGGTAAGGCTTC 58.870 47.826 1.30 0.00 0.00 3.86
755 933 3.685550 GCCACTATGTCATGGTAAGGCTT 60.686 47.826 18.20 4.58 38.34 4.35
756 934 2.158755 GCCACTATGTCATGGTAAGGCT 60.159 50.000 18.20 0.00 38.34 4.58
757 935 2.222027 GCCACTATGTCATGGTAAGGC 58.778 52.381 12.89 12.89 38.34 4.35
758 936 2.487265 GGGCCACTATGTCATGGTAAGG 60.487 54.545 4.39 1.74 38.34 2.69
759 937 2.172505 TGGGCCACTATGTCATGGTAAG 59.827 50.000 0.00 0.00 38.34 2.34
760 938 2.200955 TGGGCCACTATGTCATGGTAA 58.799 47.619 0.00 0.00 38.34 2.85
761 939 1.886422 TGGGCCACTATGTCATGGTA 58.114 50.000 0.00 0.00 38.34 3.25
762 940 1.225373 ATGGGCCACTATGTCATGGT 58.775 50.000 9.28 0.00 38.34 3.55
763 941 2.783135 GTATGGGCCACTATGTCATGG 58.217 52.381 9.28 0.00 39.16 3.66
764 942 2.224281 ACGTATGGGCCACTATGTCATG 60.224 50.000 9.28 0.00 0.00 3.07
765 943 2.037251 GACGTATGGGCCACTATGTCAT 59.963 50.000 26.38 11.05 35.10 3.06
766 944 1.411246 GACGTATGGGCCACTATGTCA 59.589 52.381 26.38 4.97 35.10 3.58
767 945 1.411246 TGACGTATGGGCCACTATGTC 59.589 52.381 25.50 25.50 35.41 3.06
768 946 1.412710 CTGACGTATGGGCCACTATGT 59.587 52.381 9.28 13.93 0.00 2.29
769 947 1.412710 ACTGACGTATGGGCCACTATG 59.587 52.381 9.28 10.72 0.00 2.23
770 948 1.412710 CACTGACGTATGGGCCACTAT 59.587 52.381 9.28 0.00 0.00 2.12
771 949 0.821517 CACTGACGTATGGGCCACTA 59.178 55.000 9.28 0.00 0.00 2.74
772 950 0.902984 TCACTGACGTATGGGCCACT 60.903 55.000 9.28 0.22 0.00 4.00
773 951 0.036765 TTCACTGACGTATGGGCCAC 60.037 55.000 9.28 0.00 0.00 5.01
774 952 0.249120 CTTCACTGACGTATGGGCCA 59.751 55.000 9.61 9.61 0.00 5.36
775 953 0.462047 CCTTCACTGACGTATGGGCC 60.462 60.000 0.00 0.00 0.00 5.80
776 954 1.090052 GCCTTCACTGACGTATGGGC 61.090 60.000 0.00 0.00 0.00 5.36
777 955 0.462047 GGCCTTCACTGACGTATGGG 60.462 60.000 0.00 0.00 0.00 4.00
778 956 0.462047 GGGCCTTCACTGACGTATGG 60.462 60.000 0.84 0.00 0.00 2.74
779 957 0.249120 TGGGCCTTCACTGACGTATG 59.751 55.000 4.53 0.00 0.00 2.39
780 958 0.249398 GTGGGCCTTCACTGACGTAT 59.751 55.000 4.53 0.00 34.98 3.06
781 959 1.116536 TGTGGGCCTTCACTGACGTA 61.117 55.000 12.61 0.00 38.40 3.57
782 960 2.426023 GTGGGCCTTCACTGACGT 59.574 61.111 4.53 0.00 34.98 4.34
783 961 1.961277 GTGTGGGCCTTCACTGACG 60.961 63.158 19.57 0.00 38.40 4.35
784 962 1.600916 GGTGTGGGCCTTCACTGAC 60.601 63.158 23.51 10.83 38.40 3.51
785 963 1.352622 AAGGTGTGGGCCTTCACTGA 61.353 55.000 23.51 0.67 45.03 3.41
786 964 1.151450 AAGGTGTGGGCCTTCACTG 59.849 57.895 23.51 0.00 45.03 3.66
787 965 1.151450 CAAGGTGTGGGCCTTCACT 59.849 57.895 23.51 8.49 46.33 3.41
788 966 0.755327 AACAAGGTGTGGGCCTTCAC 60.755 55.000 18.96 18.96 46.33 3.18
789 967 0.032615 AAACAAGGTGTGGGCCTTCA 60.033 50.000 4.53 0.87 46.33 3.02
790 968 1.068588 GAAAACAAGGTGTGGGCCTTC 59.931 52.381 4.53 0.00 46.33 3.46
792 970 0.032615 TGAAAACAAGGTGTGGGCCT 60.033 50.000 4.53 0.00 41.41 5.19
793 971 0.389025 CTGAAAACAAGGTGTGGGCC 59.611 55.000 0.00 0.00 0.00 5.80
794 972 0.249447 GCTGAAAACAAGGTGTGGGC 60.249 55.000 0.00 0.00 0.00 5.36
795 973 1.067516 CTGCTGAAAACAAGGTGTGGG 59.932 52.381 0.00 0.00 0.00 4.61
796 974 1.067516 CCTGCTGAAAACAAGGTGTGG 59.932 52.381 0.00 0.00 0.00 4.17
797 975 1.067516 CCCTGCTGAAAACAAGGTGTG 59.932 52.381 0.00 0.00 0.00 3.82
798 976 1.402787 CCCTGCTGAAAACAAGGTGT 58.597 50.000 0.00 0.00 0.00 4.16
799 977 0.032540 GCCCTGCTGAAAACAAGGTG 59.967 55.000 0.00 0.00 0.00 4.00
800 978 0.396974 TGCCCTGCTGAAAACAAGGT 60.397 50.000 0.00 0.00 0.00 3.50
801 979 0.032540 GTGCCCTGCTGAAAACAAGG 59.967 55.000 0.00 0.00 0.00 3.61
802 980 0.746063 TGTGCCCTGCTGAAAACAAG 59.254 50.000 0.00 0.00 0.00 3.16
803 981 1.134848 GTTGTGCCCTGCTGAAAACAA 60.135 47.619 0.00 0.00 0.00 2.83
804 982 0.459489 GTTGTGCCCTGCTGAAAACA 59.541 50.000 0.00 0.00 0.00 2.83
805 983 0.746659 AGTTGTGCCCTGCTGAAAAC 59.253 50.000 0.00 0.00 0.00 2.43
806 984 1.032014 GAGTTGTGCCCTGCTGAAAA 58.968 50.000 0.00 0.00 0.00 2.29
807 985 0.183492 AGAGTTGTGCCCTGCTGAAA 59.817 50.000 0.00 0.00 0.00 2.69
808 986 0.535780 CAGAGTTGTGCCCTGCTGAA 60.536 55.000 0.00 0.00 0.00 3.02
809 987 1.071987 CAGAGTTGTGCCCTGCTGA 59.928 57.895 0.00 0.00 0.00 4.26
810 988 0.322277 ATCAGAGTTGTGCCCTGCTG 60.322 55.000 0.00 0.00 0.00 4.41
811 989 0.035630 GATCAGAGTTGTGCCCTGCT 60.036 55.000 0.00 0.00 0.00 4.24
812 990 1.028868 GGATCAGAGTTGTGCCCTGC 61.029 60.000 0.00 0.00 0.00 4.85
813 991 0.742281 CGGATCAGAGTTGTGCCCTG 60.742 60.000 0.00 0.00 0.00 4.45
814 992 1.194781 ACGGATCAGAGTTGTGCCCT 61.195 55.000 0.00 0.00 0.00 5.19
815 993 0.741221 GACGGATCAGAGTTGTGCCC 60.741 60.000 0.00 0.00 0.00 5.36
816 994 0.247736 AGACGGATCAGAGTTGTGCC 59.752 55.000 0.00 0.00 0.00 5.01
817 995 2.094700 TGTAGACGGATCAGAGTTGTGC 60.095 50.000 0.00 0.00 0.00 4.57
818 996 3.057526 TGTGTAGACGGATCAGAGTTGTG 60.058 47.826 0.00 0.00 0.00 3.33
819 997 3.154710 TGTGTAGACGGATCAGAGTTGT 58.845 45.455 0.00 0.00 0.00 3.32
820 998 3.850122 TGTGTAGACGGATCAGAGTTG 57.150 47.619 0.00 0.00 0.00 3.16
821 999 6.016693 CAGATATGTGTAGACGGATCAGAGTT 60.017 42.308 0.00 0.00 0.00 3.01
822 1000 5.471797 CAGATATGTGTAGACGGATCAGAGT 59.528 44.000 0.00 0.00 0.00 3.24
823 1001 5.471797 ACAGATATGTGTAGACGGATCAGAG 59.528 44.000 3.19 0.00 0.00 3.35
824 1002 5.377478 ACAGATATGTGTAGACGGATCAGA 58.623 41.667 3.19 0.00 0.00 3.27
825 1003 5.471797 AGACAGATATGTGTAGACGGATCAG 59.528 44.000 5.33 0.00 0.00 2.90
826 1004 5.377478 AGACAGATATGTGTAGACGGATCA 58.623 41.667 5.33 0.00 0.00 2.92
827 1005 5.703592 AGAGACAGATATGTGTAGACGGATC 59.296 44.000 5.33 0.00 0.00 3.36
828 1006 5.626142 AGAGACAGATATGTGTAGACGGAT 58.374 41.667 5.33 0.00 0.00 4.18
829 1007 5.037383 AGAGACAGATATGTGTAGACGGA 57.963 43.478 5.33 0.00 0.00 4.69
830 1008 6.092944 GGATAGAGACAGATATGTGTAGACGG 59.907 46.154 5.33 0.00 0.00 4.79
831 1009 6.183360 CGGATAGAGACAGATATGTGTAGACG 60.183 46.154 5.33 1.26 0.00 4.18
832 1010 6.651643 ACGGATAGAGACAGATATGTGTAGAC 59.348 42.308 5.33 1.06 0.00 2.59
833 1011 6.770542 ACGGATAGAGACAGATATGTGTAGA 58.229 40.000 5.33 0.00 0.00 2.59
834 1012 6.092944 GGACGGATAGAGACAGATATGTGTAG 59.907 46.154 5.33 0.00 0.00 2.74
835 1013 5.938710 GGACGGATAGAGACAGATATGTGTA 59.061 44.000 5.33 0.00 0.00 2.90
836 1014 4.762765 GGACGGATAGAGACAGATATGTGT 59.237 45.833 4.97 4.97 0.00 3.72
837 1015 5.007034 AGGACGGATAGAGACAGATATGTG 58.993 45.833 0.00 0.00 0.00 3.21
838 1016 5.007034 CAGGACGGATAGAGACAGATATGT 58.993 45.833 0.00 0.00 0.00 2.29
839 1017 4.397730 CCAGGACGGATAGAGACAGATATG 59.602 50.000 0.00 0.00 36.56 1.78
840 1018 4.043561 ACCAGGACGGATAGAGACAGATAT 59.956 45.833 0.00 0.00 38.63 1.63
841 1019 3.394940 ACCAGGACGGATAGAGACAGATA 59.605 47.826 0.00 0.00 38.63 1.98
842 1020 2.175931 ACCAGGACGGATAGAGACAGAT 59.824 50.000 0.00 0.00 38.63 2.90
843 1021 1.564818 ACCAGGACGGATAGAGACAGA 59.435 52.381 0.00 0.00 38.63 3.41
844 1022 1.678627 CACCAGGACGGATAGAGACAG 59.321 57.143 0.00 0.00 38.63 3.51
845 1023 1.763968 CACCAGGACGGATAGAGACA 58.236 55.000 0.00 0.00 38.63 3.41
846 1024 0.386113 GCACCAGGACGGATAGAGAC 59.614 60.000 0.00 0.00 38.63 3.36
847 1025 0.755698 GGCACCAGGACGGATAGAGA 60.756 60.000 0.00 0.00 38.63 3.10
848 1026 1.742768 GGCACCAGGACGGATAGAG 59.257 63.158 0.00 0.00 38.63 2.43
849 1027 3.950232 GGCACCAGGACGGATAGA 58.050 61.111 0.00 0.00 38.63 1.98
871 1049 4.462280 GGGGTTCGTGGTAGGCGG 62.462 72.222 0.00 0.00 0.00 6.13
872 1050 4.462280 GGGGGTTCGTGGTAGGCG 62.462 72.222 0.00 0.00 0.00 5.52
873 1051 3.324108 TGGGGGTTCGTGGTAGGC 61.324 66.667 0.00 0.00 0.00 3.93
874 1052 2.666098 CCTGGGGGTTCGTGGTAGG 61.666 68.421 0.00 0.00 0.00 3.18
875 1053 2.987125 CCTGGGGGTTCGTGGTAG 59.013 66.667 0.00 0.00 0.00 3.18
876 1054 3.324108 GCCTGGGGGTTCGTGGTA 61.324 66.667 0.00 0.00 34.45 3.25
882 1060 4.785453 CTCTGCGCCTGGGGGTTC 62.785 72.222 13.07 0.00 34.45 3.62
886 1064 4.479993 CTTCCTCTGCGCCTGGGG 62.480 72.222 4.18 7.63 0.00 4.96
887 1065 2.754664 AAACTTCCTCTGCGCCTGGG 62.755 60.000 4.18 3.86 0.00 4.45
888 1066 0.890996 AAAACTTCCTCTGCGCCTGG 60.891 55.000 4.18 4.28 0.00 4.45
889 1067 0.519077 GAAAACTTCCTCTGCGCCTG 59.481 55.000 4.18 0.00 0.00 4.85
890 1068 0.398318 AGAAAACTTCCTCTGCGCCT 59.602 50.000 4.18 0.00 0.00 5.52
891 1069 0.519077 CAGAAAACTTCCTCTGCGCC 59.481 55.000 4.18 0.00 33.17 6.53
892 1070 1.195674 GACAGAAAACTTCCTCTGCGC 59.804 52.381 0.00 0.00 42.39 6.09
893 1071 1.801178 GGACAGAAAACTTCCTCTGCG 59.199 52.381 0.00 0.00 42.39 5.18
894 1072 2.155279 GGGACAGAAAACTTCCTCTGC 58.845 52.381 0.00 0.00 42.39 4.26
895 1073 2.373502 AGGGGACAGAAAACTTCCTCTG 59.626 50.000 0.00 0.00 38.93 3.35
896 1074 2.707554 AGGGGACAGAAAACTTCCTCT 58.292 47.619 0.00 0.00 35.20 3.69
897 1075 3.620226 GCTAGGGGACAGAAAACTTCCTC 60.620 52.174 0.00 0.00 0.00 3.71
898 1076 2.306219 GCTAGGGGACAGAAAACTTCCT 59.694 50.000 0.00 0.00 0.00 3.36
899 1077 2.712709 GCTAGGGGACAGAAAACTTCC 58.287 52.381 0.00 0.00 0.00 3.46
900 1078 2.347731 CGCTAGGGGACAGAAAACTTC 58.652 52.381 0.00 0.00 0.00 3.01
901 1079 1.610886 GCGCTAGGGGACAGAAAACTT 60.611 52.381 9.09 0.00 0.00 2.66
902 1080 0.036294 GCGCTAGGGGACAGAAAACT 60.036 55.000 9.09 0.00 0.00 2.66
939 1118 4.201679 CACGGCGATAGGGCACGA 62.202 66.667 16.62 0.00 42.43 4.35
941 1120 2.279517 CTCACGGCGATAGGGCAC 60.280 66.667 16.62 0.00 42.43 5.01
943 1122 1.591863 GAACTCACGGCGATAGGGC 60.592 63.158 16.62 3.07 37.98 5.19
961 1147 4.764172 AGATCAGATCGAACCCAGAAAAG 58.236 43.478 4.67 0.00 0.00 2.27
962 1148 4.383118 GGAGATCAGATCGAACCCAGAAAA 60.383 45.833 4.67 0.00 0.00 2.29
963 1149 3.133003 GGAGATCAGATCGAACCCAGAAA 59.867 47.826 4.67 0.00 0.00 2.52
978 1164 1.233919 CGATCGCTCTGAGGAGATCA 58.766 55.000 0.26 0.00 40.73 2.92
990 1176 2.333225 GTCTCCATCGCGATCGCT 59.667 61.111 34.69 17.21 39.32 4.93
1010 1196 2.373169 TCTGCAGAACCACTTCCTTCAT 59.627 45.455 15.67 0.00 0.00 2.57
1017 1203 0.036010 CCGGATCTGCAGAACCACTT 60.036 55.000 34.22 13.86 36.88 3.16
1020 1206 1.296392 CACCGGATCTGCAGAACCA 59.704 57.895 34.22 9.48 36.88 3.67
1029 1215 2.039624 AGCCTGTCCACCGGATCT 59.960 61.111 9.46 0.00 32.73 2.75
1059 1245 4.779489 TCATCTTCTTCTTCATGGAGGTGA 59.221 41.667 0.00 0.00 0.00 4.02
1080 1266 3.234630 CTCCCACGCGAAACCCTCA 62.235 63.158 15.93 0.00 0.00 3.86
1091 1277 4.760047 CCGCCAGTTCCTCCCACG 62.760 72.222 0.00 0.00 0.00 4.94
1124 1310 4.641645 CCACCGCCAGCCACTTGA 62.642 66.667 0.00 0.00 0.00 3.02
1138 1324 2.052237 CGTGTGCACTTTCGCCAC 60.052 61.111 19.41 4.80 32.83 5.01
1140 1326 0.942410 TAGACGTGTGCACTTTCGCC 60.942 55.000 19.41 12.33 0.00 5.54
1227 1413 7.046652 ACAGATTATCATCAACACTTCTCCAG 58.953 38.462 0.00 0.00 0.00 3.86
1272 1458 2.104792 CGCCTTATTCCAATCTCCCAGA 59.895 50.000 0.00 0.00 0.00 3.86
1323 1509 1.554617 TCCTCCATCATCAAAGCGTGA 59.445 47.619 0.00 0.00 41.67 4.35
1353 1539 1.337387 AGCGATCTAGGGTTAGCGAAC 59.663 52.381 0.38 0.38 34.56 3.95
1372 1558 6.382869 AACTGTGATCTTTTTCAAGACCAG 57.617 37.500 0.00 0.00 42.05 4.00
1383 1569 3.152341 CTGAGCCCAAACTGTGATCTTT 58.848 45.455 0.00 0.00 0.00 2.52
1407 1593 3.120095 GGTAATTGTCCGGTAACTTGTGC 60.120 47.826 0.00 0.00 0.00 4.57
1431 1617 1.073763 CCCCTCACAACCTGTTCATGA 59.926 52.381 0.00 0.00 0.00 3.07
1464 1651 7.278135 TCTGAACATCTTTAATCTCTCCCATG 58.722 38.462 0.00 0.00 0.00 3.66
1474 1661 8.277197 TGGGATCTTGATCTGAACATCTTTAAT 58.723 33.333 10.03 0.00 0.00 1.40
1482 1669 2.419159 CGCTGGGATCTTGATCTGAACA 60.419 50.000 10.03 4.80 0.00 3.18
1506 1694 1.265635 CTGACGAATTTGCCCACGAAA 59.734 47.619 0.00 0.00 0.00 3.46
1532 1720 1.414158 ATCCACCCTCATACTGACCG 58.586 55.000 0.00 0.00 0.00 4.79
1632 1823 4.335416 CCATTAGACCACAGAAACCACAT 58.665 43.478 0.00 0.00 0.00 3.21
1650 1841 1.355381 TCTTCATGCCAGTGTCCCATT 59.645 47.619 0.00 0.00 0.00 3.16
1675 1866 1.452651 CGTCATGCTCCCCATTGCT 60.453 57.895 0.00 0.00 29.71 3.91
1683 1874 0.318762 GGGTATCCTCGTCATGCTCC 59.681 60.000 0.00 0.00 0.00 4.70
1723 1914 2.268920 GCGTCCTCCATCTGCCAA 59.731 61.111 0.00 0.00 0.00 4.52
1728 1919 2.835431 CTCCCGCGTCCTCCATCT 60.835 66.667 4.92 0.00 0.00 2.90
1740 1931 1.045911 CCCTTCCTCTTCCTCTCCCG 61.046 65.000 0.00 0.00 0.00 5.14
1743 1934 1.199615 CACCCCTTCCTCTTCCTCTC 58.800 60.000 0.00 0.00 0.00 3.20
1768 1959 0.979187 GATGGTCCCCCTGGTCGTTA 60.979 60.000 0.00 0.00 0.00 3.18
1769 1960 2.204090 ATGGTCCCCCTGGTCGTT 60.204 61.111 0.00 0.00 0.00 3.85
1784 1975 1.400846 GGTTGTCTGCAGCATCTGATG 59.599 52.381 9.47 13.26 32.44 3.07
1790 1981 1.342174 CAAAAGGGTTGTCTGCAGCAT 59.658 47.619 9.47 0.00 0.00 3.79
1818 2009 5.597182 AGGATTTACTGTATTAGTGGCTCGA 59.403 40.000 0.00 0.00 40.65 4.04
1824 2015 8.801882 TCCCAAAAGGATTTACTGTATTAGTG 57.198 34.615 0.00 0.00 40.93 2.74
1836 2027 0.252696 GCCCCCTCCCAAAAGGATTT 60.253 55.000 0.00 0.00 46.33 2.17
1861 2052 1.725557 CCAGCATCTGCACCATCAGC 61.726 60.000 4.79 0.00 45.16 4.26
1868 2059 1.153208 CCTCCTCCAGCATCTGCAC 60.153 63.158 4.79 0.00 45.16 4.57
1880 2071 0.637743 ACCCCTTCCTCTACCTCCTC 59.362 60.000 0.00 0.00 0.00 3.71
1899 2090 2.038426 CGGGGCATGGTAATCATACTCA 59.962 50.000 0.00 0.00 34.12 3.41
1936 2127 1.427753 ACCAGGGTTAACTTTCCCCAG 59.572 52.381 5.42 0.00 44.40 4.45
1956 2147 1.351017 GGTTGATTGGTCTGACCCTGA 59.649 52.381 23.42 10.35 37.50 3.86
1980 2171 1.524002 CACACCATCGCTCCCAGAT 59.476 57.895 0.00 0.00 0.00 2.90
2014 2205 4.896482 GGGAGTGGATACTGAATCTACAGT 59.104 45.833 0.00 0.00 45.89 3.55
2054 2245 5.474532 GCACCATATAGCTTTGATTCCATCA 59.525 40.000 0.00 0.00 37.55 3.07
2056 2247 5.387788 TGCACCATATAGCTTTGATTCCAT 58.612 37.500 0.00 0.00 0.00 3.41
2072 2263 1.545582 GTGCTACCACAATTGCACCAT 59.454 47.619 5.05 0.00 46.84 3.55
2121 2312 1.207329 GTTTCCCCTACACGCAGATCT 59.793 52.381 0.00 0.00 0.00 2.75
2133 2324 2.597510 GCCACGCTTGTTTCCCCT 60.598 61.111 0.00 0.00 0.00 4.79
2142 2333 1.069823 CTCATAGGATCAGCCACGCTT 59.930 52.381 0.00 0.00 36.40 4.68
2145 2336 0.390492 TGCTCATAGGATCAGCCACG 59.610 55.000 0.00 0.00 40.02 4.94
2157 2348 4.584325 GCATTCTTTTATGGGGTGCTCATA 59.416 41.667 0.00 0.00 0.00 2.15
2172 2363 7.059202 AGATTTCTTTCTGTTGGCATTCTTT 57.941 32.000 0.00 0.00 0.00 2.52
2215 2406 4.371786 TCGTTCATATCAATCCTCACTGC 58.628 43.478 0.00 0.00 0.00 4.40
2407 2598 1.308047 AATTTCAGCACGTGCACTCA 58.692 45.000 39.21 22.05 45.16 3.41
2474 2665 2.344592 ACAATACCACCACTCCTTCCA 58.655 47.619 0.00 0.00 0.00 3.53
2507 2698 8.893727 ACTAGAAACCTCCAATTTATTTCATCG 58.106 33.333 0.00 0.00 32.78 3.84
2536 2728 4.926860 TGCGCCAATATGATATTTCGAG 57.073 40.909 4.18 5.16 0.00 4.04
2553 2745 3.435186 GCTCCAAGACCCTTGCGC 61.435 66.667 0.00 0.00 0.00 6.09
2554 2746 2.037136 CAGCTCCAAGACCCTTGCG 61.037 63.158 1.39 0.00 0.00 4.85
2563 2755 3.635268 GACAGGGCCCAGCTCCAAG 62.635 68.421 27.56 5.26 0.00 3.61
2623 2815 2.393764 GTCCATGTTTTGTGCCTTTCG 58.606 47.619 0.00 0.00 0.00 3.46
2632 2824 4.122143 ACACAAAGTGGTCCATGTTTTG 57.878 40.909 17.86 17.86 37.94 2.44
2680 2872 3.054287 TGAAATCGCCTATAACCACCCAA 60.054 43.478 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.