Multiple sequence alignment - TraesCS7D01G016800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G016800 chr7D 100.000 4828 0 0 1 4828 7450465 7445638 0.000000e+00 8916.0
1 TraesCS7D01G016800 chr7A 87.674 2296 172 59 2574 4828 8375132 8372907 0.000000e+00 2569.0
2 TraesCS7D01G016800 chr7A 91.695 1758 78 23 542 2270 8376867 8375149 0.000000e+00 2375.0
3 TraesCS7D01G016800 chr7A 89.055 402 19 7 102 501 8377239 8376861 4.370000e-130 475.0
4 TraesCS7D01G016800 chr7A 96.380 221 7 1 1 220 8377461 8377241 3.550000e-96 363.0
5 TraesCS7D01G016800 chr7A 94.340 53 3 0 2352 2404 220992591 220992643 1.110000e-11 82.4
6 TraesCS7D01G016800 chr7A 86.111 72 8 2 387 457 213087777 213087707 5.180000e-10 76.8
7 TraesCS7D01G016800 chr4A 85.527 2522 242 81 2370 4828 732773367 732770906 0.000000e+00 2521.0
8 TraesCS7D01G016800 chr4A 88.621 870 59 20 932 1772 732774321 732773463 0.000000e+00 1022.0
9 TraesCS7D01G016800 chr4A 88.462 364 33 6 27 382 732775101 732774739 9.600000e-117 431.0
10 TraesCS7D01G016800 chr4A 88.889 45 4 1 4325 4369 664240939 664240982 2.000000e-03 54.7
11 TraesCS7D01G016800 chr2B 89.744 819 68 11 2574 3384 759371755 759370945 0.000000e+00 1033.0
12 TraesCS7D01G016800 chr2B 82.667 75 10 2 388 459 146145685 146145611 4.030000e-06 63.9
13 TraesCS7D01G016800 chr2D 80.380 316 53 8 1958 2270 648984461 648984770 1.050000e-56 231.0
14 TraesCS7D01G016800 chr2D 85.377 212 28 3 2352 2561 648984536 648984746 2.930000e-52 217.0
15 TraesCS7D01G016800 chr2D 84.906 212 29 3 2352 2561 648988296 648988506 1.360000e-50 211.0
16 TraesCS7D01G016800 chr4B 84.615 221 22 9 1547 1756 650181813 650181594 4.900000e-50 209.0
17 TraesCS7D01G016800 chr4B 84.163 221 23 9 1547 1756 650120151 650119932 2.280000e-48 204.0
18 TraesCS7D01G016800 chr4B 86.243 189 20 6 1547 1730 650051755 650051568 2.950000e-47 200.0
19 TraesCS7D01G016800 chr4B 83.929 224 18 11 1547 1756 650061364 650061145 1.060000e-46 198.0
20 TraesCS7D01G016800 chr6B 86.567 67 9 0 3207 3273 9003065 9003131 1.860000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G016800 chr7D 7445638 7450465 4827 True 8916.000000 8916 100.000000 1 4828 1 chr7D.!!$R1 4827
1 TraesCS7D01G016800 chr7A 8372907 8377461 4554 True 1445.500000 2569 91.201000 1 4828 4 chr7A.!!$R2 4827
2 TraesCS7D01G016800 chr4A 732770906 732775101 4195 True 1324.666667 2521 87.536667 27 4828 3 chr4A.!!$R1 4801
3 TraesCS7D01G016800 chr2B 759370945 759371755 810 True 1033.000000 1033 89.744000 2574 3384 1 chr2B.!!$R2 810
4 TraesCS7D01G016800 chr2D 648984461 648988506 4045 False 219.666667 231 83.554333 1958 2561 3 chr2D.!!$F1 603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
928 1066 0.197661 TCCTTAACCTCCCACCCCTT 59.802 55.0 0.00 0.0 0.00 3.95 F
1509 1692 0.179121 CCGTCGATTCCAACGATCCA 60.179 55.0 7.58 0.0 41.29 3.41 F
2433 2635 0.182775 AGTCGGTTCAGTTTGGGCTT 59.817 50.0 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2570 2772 0.179468 AAGGGGATGCAATGCAATGC 59.821 50.0 19.99 19.99 43.62 3.56 R
3207 6984 0.675633 AGGCCATTGAACTGCACAAC 59.324 50.0 5.01 0.00 0.00 3.32 R
4086 7904 0.037139 TTTCGTGGGGACATACGTGG 60.037 55.0 0.00 0.00 46.14 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.874701 CTCGAGGCCACCATGATAAAAG 59.125 50.000 5.01 0.00 0.00 2.27
126 250 6.989759 CCCTTTGTTTTATTAGTGGTTTTGCT 59.010 34.615 0.00 0.00 0.00 3.91
173 297 4.695928 GGCGAGAACTAAAGACTTTCCATT 59.304 41.667 3.07 0.00 0.00 3.16
212 336 4.274978 TGTATCATACACCGAGGACTTGA 58.725 43.478 0.00 0.00 32.89 3.02
328 453 2.506438 GGCGTCACGAGCAGTACC 60.506 66.667 0.00 0.00 36.08 3.34
340 465 2.226674 GAGCAGTACCAAAACTTCAGGC 59.773 50.000 0.00 0.00 0.00 4.85
341 466 1.269723 GCAGTACCAAAACTTCAGGCC 59.730 52.381 0.00 0.00 0.00 5.19
408 534 7.968405 CCGACTAGTAAGAAAAATTCATTTGGG 59.032 37.037 0.00 0.00 0.00 4.12
409 535 7.484959 CGACTAGTAAGAAAAATTCATTTGGGC 59.515 37.037 0.00 0.00 0.00 5.36
416 542 2.477104 AATTCATTTGGGCTAGGGGG 57.523 50.000 0.00 0.00 0.00 5.40
451 577 1.227853 CCTTGTATGTAGCCCCGCC 60.228 63.158 0.00 0.00 0.00 6.13
505 631 1.188863 AATGTGCTTGAAGATGGGCC 58.811 50.000 0.00 0.00 0.00 5.80
509 635 1.821332 GCTTGAAGATGGGCCCGAG 60.821 63.158 19.37 7.08 0.00 4.63
511 637 1.615124 TTGAAGATGGGCCCGAGGA 60.615 57.895 19.37 0.00 0.00 3.71
521 647 3.996124 CCCGAGGATAGGCAGGCG 61.996 72.222 0.00 0.00 0.00 5.52
526 652 2.153547 GAGGATAGGCAGGCGAGCTC 62.154 65.000 2.73 2.73 34.17 4.09
596 722 4.344865 GCCCCCAAAGGCGAGACA 62.345 66.667 0.00 0.00 44.57 3.41
597 723 2.045926 CCCCCAAAGGCGAGACAG 60.046 66.667 0.00 0.00 0.00 3.51
601 727 0.321671 CCCAAAGGCGAGACAGAGAA 59.678 55.000 0.00 0.00 0.00 2.87
604 730 2.605030 CAAAGGCGAGACAGAGAAGAG 58.395 52.381 0.00 0.00 0.00 2.85
632 758 2.970639 CTCCCATGTCGACGGTGT 59.029 61.111 11.62 0.00 0.00 4.16
673 799 0.455410 TGACAACACAACTTGGCAGC 59.545 50.000 0.00 0.00 34.02 5.25
718 848 3.955471 ACTTGTTGGATTCGATGGACAT 58.045 40.909 0.00 0.00 0.00 3.06
719 849 5.097742 ACTTGTTGGATTCGATGGACATA 57.902 39.130 0.00 0.00 0.00 2.29
750 880 8.553153 TCTTTCCTAGAGAGAGACAGAGATTTA 58.447 37.037 0.00 0.00 30.98 1.40
862 1000 0.543749 CCACTTCATCCTCACCTCCC 59.456 60.000 0.00 0.00 0.00 4.30
886 1024 1.623557 CCTTCCACTCATCTCCCTCCA 60.624 57.143 0.00 0.00 0.00 3.86
887 1025 1.484240 CTTCCACTCATCTCCCTCCAC 59.516 57.143 0.00 0.00 0.00 4.02
890 1028 1.342874 CCACTCATCTCCCTCCACTCT 60.343 57.143 0.00 0.00 0.00 3.24
892 1030 3.437784 CCACTCATCTCCCTCCACTCTAT 60.438 52.174 0.00 0.00 0.00 1.98
928 1066 0.197661 TCCTTAACCTCCCACCCCTT 59.802 55.000 0.00 0.00 0.00 3.95
930 1068 1.670059 CTTAACCTCCCACCCCTTCT 58.330 55.000 0.00 0.00 0.00 2.85
938 1103 2.365105 CACCCCTTCTCCCCGCTA 60.365 66.667 0.00 0.00 0.00 4.26
939 1104 2.365237 ACCCCTTCTCCCCGCTAC 60.365 66.667 0.00 0.00 0.00 3.58
989 1158 2.203998 CCACCCACACTCCCTCCT 60.204 66.667 0.00 0.00 0.00 3.69
1054 1231 3.782443 CCGCCACTACCACCTCCC 61.782 72.222 0.00 0.00 0.00 4.30
1167 1347 4.436998 CAGGCCGTCTCCACCGAC 62.437 72.222 0.00 0.00 0.00 4.79
1293 1473 0.605319 TCAACACCAAGATCACCGCC 60.605 55.000 0.00 0.00 0.00 6.13
1338 1518 1.001974 CACATGGTCTTCTCCACCGAA 59.998 52.381 0.00 0.00 40.51 4.30
1505 1688 3.635433 GATCCGTCGATTCCAACGA 57.365 52.632 7.58 0.00 41.29 3.85
1509 1692 0.179121 CCGTCGATTCCAACGATCCA 60.179 55.000 7.58 0.00 41.29 3.41
1610 1797 3.400054 GGGGAGGTCGTCAAGGGG 61.400 72.222 0.00 0.00 0.00 4.79
1671 1858 4.276183 CCAGAGATGAGGAAATCTGCATTG 59.724 45.833 0.00 0.00 37.03 2.82
1681 1868 1.661341 ATCTGCATTGTTCGGCTCTC 58.339 50.000 0.00 0.00 0.00 3.20
1698 1891 5.570589 CGGCTCTCAACAATCTGAAAAATTC 59.429 40.000 0.00 0.00 0.00 2.17
1703 1896 9.740239 CTCTCAACAATCTGAAAAATTCTTCAA 57.260 29.630 0.00 0.00 34.96 2.69
1718 1915 8.614994 AAATTCTTCAAACTTAACAGTGTTCG 57.385 30.769 12.82 7.69 31.60 3.95
1730 1927 4.395959 ACAGTGTTCGGTTTAGTTCAGA 57.604 40.909 0.00 0.00 0.00 3.27
1732 1929 3.181774 CAGTGTTCGGTTTAGTTCAGACG 59.818 47.826 0.00 0.00 0.00 4.18
1806 2005 7.880160 AAACACATTCCTGCTAATGCTATTA 57.120 32.000 6.84 0.00 39.93 0.98
1809 2008 8.103948 ACACATTCCTGCTAATGCTATTATTC 57.896 34.615 6.84 0.00 39.93 1.75
1823 2023 8.827177 ATGCTATTATTCAATGCAATCCAAAG 57.173 30.769 0.00 0.00 34.28 2.77
1851 2052 1.822990 CTCTGCAATGGATTTGGCAGT 59.177 47.619 11.67 0.00 38.98 4.40
1853 2054 2.231964 TCTGCAATGGATTTGGCAGTTC 59.768 45.455 11.67 0.00 38.98 3.01
1854 2055 1.067706 TGCAATGGATTTGGCAGTTCG 60.068 47.619 0.00 0.00 35.75 3.95
1855 2056 1.067635 GCAATGGATTTGGCAGTTCGT 60.068 47.619 0.00 0.00 35.75 3.85
1856 2057 2.163412 GCAATGGATTTGGCAGTTCGTA 59.837 45.455 0.00 0.00 35.75 3.43
1857 2058 3.758300 CAATGGATTTGGCAGTTCGTAC 58.242 45.455 0.00 0.00 0.00 3.67
1859 2060 1.001068 TGGATTTGGCAGTTCGTACGA 59.999 47.619 15.28 15.28 0.00 3.43
1861 2062 2.284417 GGATTTGGCAGTTCGTACGATC 59.716 50.000 20.27 18.27 0.00 3.69
1862 2063 2.736144 TTTGGCAGTTCGTACGATCT 57.264 45.000 20.27 20.35 0.00 2.75
1863 2064 2.273370 TTGGCAGTTCGTACGATCTC 57.727 50.000 22.67 17.13 0.00 2.75
1864 2065 0.454600 TGGCAGTTCGTACGATCTCC 59.545 55.000 22.67 23.22 0.00 3.71
1865 2066 0.454600 GGCAGTTCGTACGATCTCCA 59.545 55.000 22.67 4.21 0.00 3.86
1866 2067 1.546834 GCAGTTCGTACGATCTCCAC 58.453 55.000 22.67 15.78 0.00 4.02
1867 2068 1.132643 GCAGTTCGTACGATCTCCACT 59.867 52.381 22.67 17.63 0.00 4.00
1868 2069 2.786854 CAGTTCGTACGATCTCCACTG 58.213 52.381 24.55 24.55 0.00 3.66
1895 2096 0.971959 TCTGTTGCATTGCATCCCCC 60.972 55.000 12.95 0.00 38.76 5.40
1896 2097 0.974010 CTGTTGCATTGCATCCCCCT 60.974 55.000 12.95 0.00 38.76 4.79
1897 2098 1.259142 TGTTGCATTGCATCCCCCTG 61.259 55.000 12.95 0.00 38.76 4.45
1898 2099 1.078891 TTGCATTGCATCCCCCTGT 59.921 52.632 12.95 0.00 38.76 4.00
1899 2100 0.334335 TTGCATTGCATCCCCCTGTA 59.666 50.000 12.95 0.00 38.76 2.74
1900 2101 0.395586 TGCATTGCATCCCCCTGTAC 60.396 55.000 7.38 0.00 31.71 2.90
1902 2103 1.686115 GCATTGCATCCCCCTGTACTT 60.686 52.381 3.15 0.00 0.00 2.24
1982 2183 5.816258 TCTGCAGATCATCAAGAATCTGTTC 59.184 40.000 13.74 0.40 41.72 3.18
1994 2195 6.149973 TCAAGAATCTGTTCCTTGTGCTAATG 59.850 38.462 0.00 0.00 34.81 1.90
2020 2221 8.764524 AGTAGCTATTTTCAAACTCAGTAGTG 57.235 34.615 0.00 0.00 35.62 2.74
2046 2247 7.486551 GTCTCATTCTCATTATATCGTGGCTAC 59.513 40.741 0.00 0.00 0.00 3.58
2085 2286 7.280356 ACTTATGTCTGAACAAGGTGTTAGTT 58.720 34.615 0.00 0.00 41.28 2.24
2132 2333 8.454106 CAGTTCAGGAATTGTAGACCTTAAATG 58.546 37.037 0.00 0.00 30.73 2.32
2139 2340 8.831550 GGAATTGTAGACCTTAAATGATCTGTC 58.168 37.037 0.00 0.00 0.00 3.51
2163 2364 4.096833 TCTTGTGCCAATGAATATCTGCAC 59.903 41.667 5.54 5.54 46.85 4.57
2177 2378 9.276590 TGAATATCTGCACCATCATTTACTAAG 57.723 33.333 0.00 0.00 0.00 2.18
2186 2387 7.220030 CACCATCATTTACTAAGGCTAGTCAT 58.780 38.462 0.00 0.00 39.23 3.06
2199 2400 3.576118 GGCTAGTCATCTCAGGCTCATTA 59.424 47.826 0.00 0.00 32.45 1.90
2206 2407 8.358582 AGTCATCTCAGGCTCATTAAATTTTT 57.641 30.769 0.00 0.00 0.00 1.94
2266 2468 5.412286 GCAATGGATTTTACAAGTTGGCATT 59.588 36.000 7.96 0.00 0.00 3.56
2267 2469 6.402442 GCAATGGATTTTACAAGTTGGCATTC 60.402 38.462 7.96 0.00 0.00 2.67
2268 2470 6.610075 ATGGATTTTACAAGTTGGCATTCT 57.390 33.333 7.96 0.00 0.00 2.40
2269 2471 6.024552 TGGATTTTACAAGTTGGCATTCTC 57.975 37.500 7.96 0.00 0.00 2.87
2270 2472 5.538053 TGGATTTTACAAGTTGGCATTCTCA 59.462 36.000 7.96 0.00 0.00 3.27
2271 2473 6.211184 TGGATTTTACAAGTTGGCATTCTCAT 59.789 34.615 7.96 0.00 0.00 2.90
2272 2474 7.099120 GGATTTTACAAGTTGGCATTCTCATT 58.901 34.615 7.96 0.00 0.00 2.57
2273 2475 8.250332 GGATTTTACAAGTTGGCATTCTCATTA 58.750 33.333 7.96 0.00 0.00 1.90
2274 2476 9.807649 GATTTTACAAGTTGGCATTCTCATTAT 57.192 29.630 7.96 0.00 0.00 1.28
2275 2477 9.807649 ATTTTACAAGTTGGCATTCTCATTATC 57.192 29.630 7.96 0.00 0.00 1.75
2276 2478 7.936496 TTACAAGTTGGCATTCTCATTATCA 57.064 32.000 7.96 0.00 0.00 2.15
2277 2479 8.523915 TTACAAGTTGGCATTCTCATTATCAT 57.476 30.769 7.96 0.00 0.00 2.45
2278 2480 6.802608 ACAAGTTGGCATTCTCATTATCATG 58.197 36.000 7.96 0.00 0.00 3.07
2279 2481 6.183360 ACAAGTTGGCATTCTCATTATCATGG 60.183 38.462 7.96 0.00 0.00 3.66
2280 2482 5.452255 AGTTGGCATTCTCATTATCATGGT 58.548 37.500 0.00 0.00 0.00 3.55
2281 2483 5.895534 AGTTGGCATTCTCATTATCATGGTT 59.104 36.000 0.00 0.00 0.00 3.67
2282 2484 6.381994 AGTTGGCATTCTCATTATCATGGTTT 59.618 34.615 0.00 0.00 0.00 3.27
2283 2485 6.795144 TGGCATTCTCATTATCATGGTTTT 57.205 33.333 0.00 0.00 0.00 2.43
2284 2486 6.575267 TGGCATTCTCATTATCATGGTTTTG 58.425 36.000 0.00 0.00 0.00 2.44
2285 2487 5.464389 GGCATTCTCATTATCATGGTTTTGC 59.536 40.000 0.00 0.00 0.00 3.68
2286 2488 6.044046 GCATTCTCATTATCATGGTTTTGCA 58.956 36.000 0.00 0.00 0.00 4.08
2287 2489 6.535865 GCATTCTCATTATCATGGTTTTGCAA 59.464 34.615 0.00 0.00 0.00 4.08
2288 2490 7.464977 GCATTCTCATTATCATGGTTTTGCAAC 60.465 37.037 0.00 0.00 0.00 4.17
2289 2491 6.839124 TCTCATTATCATGGTTTTGCAACT 57.161 33.333 0.00 0.00 32.90 3.16
2290 2492 6.855836 TCTCATTATCATGGTTTTGCAACTC 58.144 36.000 0.00 0.00 32.90 3.01
2291 2493 5.639757 TCATTATCATGGTTTTGCAACTCG 58.360 37.500 0.00 0.00 32.90 4.18
2292 2494 4.433186 TTATCATGGTTTTGCAACTCGG 57.567 40.909 0.00 0.00 32.90 4.63
2293 2495 1.686355 TCATGGTTTTGCAACTCGGT 58.314 45.000 0.00 0.00 32.90 4.69
2294 2496 2.852449 TCATGGTTTTGCAACTCGGTA 58.148 42.857 0.00 0.00 32.90 4.02
2295 2497 2.811431 TCATGGTTTTGCAACTCGGTAG 59.189 45.455 0.00 0.00 32.90 3.18
2296 2498 2.335316 TGGTTTTGCAACTCGGTAGT 57.665 45.000 0.00 0.00 37.65 2.73
2297 2499 1.944024 TGGTTTTGCAACTCGGTAGTG 59.056 47.619 0.00 0.00 35.62 2.74
2298 2500 1.944709 GGTTTTGCAACTCGGTAGTGT 59.055 47.619 0.00 0.00 35.62 3.55
2299 2501 2.286772 GGTTTTGCAACTCGGTAGTGTG 60.287 50.000 0.00 0.00 35.62 3.82
2300 2502 2.319136 TTTGCAACTCGGTAGTGTGT 57.681 45.000 0.00 0.00 35.62 3.72
2301 2503 1.860676 TTGCAACTCGGTAGTGTGTC 58.139 50.000 0.00 0.00 35.62 3.67
2302 2504 0.747852 TGCAACTCGGTAGTGTGTCA 59.252 50.000 0.00 0.00 35.62 3.58
2303 2505 1.343142 TGCAACTCGGTAGTGTGTCAT 59.657 47.619 0.00 0.00 35.62 3.06
2304 2506 2.224185 TGCAACTCGGTAGTGTGTCATT 60.224 45.455 0.00 0.00 35.62 2.57
2305 2507 2.412089 GCAACTCGGTAGTGTGTCATTC 59.588 50.000 0.00 0.00 35.62 2.67
2306 2508 3.861131 GCAACTCGGTAGTGTGTCATTCT 60.861 47.826 0.00 0.00 35.62 2.40
2307 2509 3.851976 ACTCGGTAGTGTGTCATTCTC 57.148 47.619 0.00 0.00 33.57 2.87
2308 2510 3.154710 ACTCGGTAGTGTGTCATTCTCA 58.845 45.455 0.00 0.00 33.57 3.27
2309 2511 3.764434 ACTCGGTAGTGTGTCATTCTCAT 59.236 43.478 0.00 0.00 33.57 2.90
2310 2512 4.220821 ACTCGGTAGTGTGTCATTCTCATT 59.779 41.667 0.00 0.00 33.57 2.57
2311 2513 5.417894 ACTCGGTAGTGTGTCATTCTCATTA 59.582 40.000 0.00 0.00 33.57 1.90
2312 2514 6.096987 ACTCGGTAGTGTGTCATTCTCATTAT 59.903 38.462 0.00 0.00 33.57 1.28
2313 2515 6.504398 TCGGTAGTGTGTCATTCTCATTATC 58.496 40.000 0.00 0.00 0.00 1.75
2314 2516 5.692204 CGGTAGTGTGTCATTCTCATTATCC 59.308 44.000 0.00 0.00 0.00 2.59
2315 2517 6.461648 CGGTAGTGTGTCATTCTCATTATCCT 60.462 42.308 0.00 0.00 0.00 3.24
2316 2518 6.703607 GGTAGTGTGTCATTCTCATTATCCTG 59.296 42.308 0.00 0.00 0.00 3.86
2317 2519 5.678583 AGTGTGTCATTCTCATTATCCTGG 58.321 41.667 0.00 0.00 0.00 4.45
2318 2520 4.274459 GTGTGTCATTCTCATTATCCTGGC 59.726 45.833 0.00 0.00 0.00 4.85
2319 2521 4.164796 TGTGTCATTCTCATTATCCTGGCT 59.835 41.667 0.00 0.00 0.00 4.75
2320 2522 5.366477 TGTGTCATTCTCATTATCCTGGCTA 59.634 40.000 0.00 0.00 0.00 3.93
2321 2523 6.043590 TGTGTCATTCTCATTATCCTGGCTAT 59.956 38.462 0.00 0.00 0.00 2.97
2322 2524 6.939163 GTGTCATTCTCATTATCCTGGCTATT 59.061 38.462 0.00 0.00 0.00 1.73
2323 2525 7.446625 GTGTCATTCTCATTATCCTGGCTATTT 59.553 37.037 0.00 0.00 0.00 1.40
2324 2526 8.000709 TGTCATTCTCATTATCCTGGCTATTTT 58.999 33.333 0.00 0.00 0.00 1.82
2325 2527 8.295288 GTCATTCTCATTATCCTGGCTATTTTG 58.705 37.037 0.00 0.00 0.00 2.44
2326 2528 6.639632 TTCTCATTATCCTGGCTATTTTGC 57.360 37.500 0.00 0.00 0.00 3.68
2327 2529 5.693961 TCTCATTATCCTGGCTATTTTGCA 58.306 37.500 0.00 0.00 34.04 4.08
2328 2530 6.128486 TCTCATTATCCTGGCTATTTTGCAA 58.872 36.000 0.00 0.00 34.04 4.08
2329 2531 6.039717 TCTCATTATCCTGGCTATTTTGCAAC 59.960 38.462 0.00 0.00 34.04 4.17
2330 2532 5.893255 TCATTATCCTGGCTATTTTGCAACT 59.107 36.000 0.00 0.00 34.04 3.16
2331 2533 5.835113 TTATCCTGGCTATTTTGCAACTC 57.165 39.130 0.00 0.00 34.04 3.01
2332 2534 2.083774 TCCTGGCTATTTTGCAACTCG 58.916 47.619 0.00 0.00 34.04 4.18
2333 2535 1.133025 CCTGGCTATTTTGCAACTCGG 59.867 52.381 0.00 0.00 34.04 4.63
2334 2536 1.812571 CTGGCTATTTTGCAACTCGGT 59.187 47.619 0.00 0.00 34.04 4.69
2335 2537 3.006940 CTGGCTATTTTGCAACTCGGTA 58.993 45.455 0.00 0.00 34.04 4.02
2336 2538 3.006940 TGGCTATTTTGCAACTCGGTAG 58.993 45.455 0.00 0.00 34.04 3.18
2337 2539 3.007635 GGCTATTTTGCAACTCGGTAGT 58.992 45.455 0.00 0.00 37.65 2.73
2338 2540 3.181510 GGCTATTTTGCAACTCGGTAGTG 60.182 47.826 0.00 0.00 35.62 2.74
2339 2541 3.435671 GCTATTTTGCAACTCGGTAGTGT 59.564 43.478 0.00 0.00 35.62 3.55
2340 2542 4.435651 GCTATTTTGCAACTCGGTAGTGTC 60.436 45.833 0.00 0.00 35.62 3.67
2341 2543 2.902705 TTTGCAACTCGGTAGTGTCT 57.097 45.000 0.00 0.00 35.62 3.41
2342 2544 2.433868 TTGCAACTCGGTAGTGTCTC 57.566 50.000 0.00 0.00 35.62 3.36
2343 2545 1.324383 TGCAACTCGGTAGTGTCTCA 58.676 50.000 0.00 0.00 35.62 3.27
2344 2546 1.893137 TGCAACTCGGTAGTGTCTCAT 59.107 47.619 0.00 0.00 35.62 2.90
2345 2547 2.299013 TGCAACTCGGTAGTGTCTCATT 59.701 45.455 0.00 0.00 35.62 2.57
2346 2548 2.924290 GCAACTCGGTAGTGTCTCATTC 59.076 50.000 0.00 0.00 35.62 2.67
2347 2549 3.367498 GCAACTCGGTAGTGTCTCATTCT 60.367 47.826 0.00 0.00 35.62 2.40
2348 2550 4.416620 CAACTCGGTAGTGTCTCATTCTC 58.583 47.826 0.00 0.00 35.62 2.87
2349 2551 3.687125 ACTCGGTAGTGTCTCATTCTCA 58.313 45.455 0.00 0.00 33.57 3.27
2350 2552 4.274147 ACTCGGTAGTGTCTCATTCTCAT 58.726 43.478 0.00 0.00 33.57 2.90
2351 2553 4.707448 ACTCGGTAGTGTCTCATTCTCATT 59.293 41.667 0.00 0.00 33.57 2.57
2352 2554 5.886474 ACTCGGTAGTGTCTCATTCTCATTA 59.114 40.000 0.00 0.00 33.57 1.90
2353 2555 6.547880 ACTCGGTAGTGTCTCATTCTCATTAT 59.452 38.462 0.00 0.00 33.57 1.28
2354 2556 6.971602 TCGGTAGTGTCTCATTCTCATTATC 58.028 40.000 0.00 0.00 0.00 1.75
2355 2557 6.546034 TCGGTAGTGTCTCATTCTCATTATCA 59.454 38.462 0.00 0.00 0.00 2.15
2356 2558 7.231519 TCGGTAGTGTCTCATTCTCATTATCAT 59.768 37.037 0.00 0.00 0.00 2.45
2357 2559 7.328005 CGGTAGTGTCTCATTCTCATTATCATG 59.672 40.741 0.00 0.00 0.00 3.07
2358 2560 7.601886 GGTAGTGTCTCATTCTCATTATCATGG 59.398 40.741 0.00 0.00 0.00 3.66
2359 2561 5.996513 AGTGTCTCATTCTCATTATCATGGC 59.003 40.000 0.00 0.00 0.00 4.40
2360 2562 5.996513 GTGTCTCATTCTCATTATCATGGCT 59.003 40.000 0.00 0.00 0.00 4.75
2361 2563 7.015974 AGTGTCTCATTCTCATTATCATGGCTA 59.984 37.037 0.00 0.00 0.00 3.93
2362 2564 7.823310 GTGTCTCATTCTCATTATCATGGCTAT 59.177 37.037 0.00 0.00 0.00 2.97
2363 2565 8.380867 TGTCTCATTCTCATTATCATGGCTATT 58.619 33.333 0.00 0.00 0.00 1.73
2364 2566 9.881649 GTCTCATTCTCATTATCATGGCTATTA 57.118 33.333 0.00 0.00 0.00 0.98
2365 2567 9.881649 TCTCATTCTCATTATCATGGCTATTAC 57.118 33.333 0.00 0.00 0.00 1.89
2366 2568 9.662947 CTCATTCTCATTATCATGGCTATTACA 57.337 33.333 0.00 0.00 0.00 2.41
2369 2571 8.621532 TTCTCATTATCATGGCTATTACAACC 57.378 34.615 0.00 0.00 0.00 3.77
2370 2572 7.168219 TCTCATTATCATGGCTATTACAACCC 58.832 38.462 0.00 0.00 0.00 4.11
2371 2573 6.245408 TCATTATCATGGCTATTACAACCCC 58.755 40.000 0.00 0.00 0.00 4.95
2372 2574 3.525800 ATCATGGCTATTACAACCCCC 57.474 47.619 0.00 0.00 0.00 5.40
2373 2575 2.498441 TCATGGCTATTACAACCCCCT 58.502 47.619 0.00 0.00 0.00 4.79
2374 2576 2.174639 TCATGGCTATTACAACCCCCTG 59.825 50.000 0.00 0.00 0.00 4.45
2375 2577 1.676248 TGGCTATTACAACCCCCTGT 58.324 50.000 0.00 0.00 0.00 4.00
2376 2578 2.848242 TGGCTATTACAACCCCCTGTA 58.152 47.619 0.00 0.00 0.00 2.74
2377 2579 2.506644 TGGCTATTACAACCCCCTGTAC 59.493 50.000 0.00 0.00 31.52 2.90
2378 2580 2.775960 GGCTATTACAACCCCCTGTACT 59.224 50.000 0.00 0.00 31.52 2.73
2379 2581 3.201487 GGCTATTACAACCCCCTGTACTT 59.799 47.826 0.00 0.00 31.52 2.24
2380 2582 4.409901 GGCTATTACAACCCCCTGTACTTA 59.590 45.833 0.00 0.00 31.52 2.24
2381 2583 5.072736 GGCTATTACAACCCCCTGTACTTAT 59.927 44.000 0.00 0.00 31.52 1.73
2382 2584 6.228995 GCTATTACAACCCCCTGTACTTATC 58.771 44.000 0.00 0.00 31.52 1.75
2383 2585 6.042897 GCTATTACAACCCCCTGTACTTATCT 59.957 42.308 0.00 0.00 31.52 1.98
2384 2586 5.945144 TTACAACCCCCTGTACTTATCTC 57.055 43.478 0.00 0.00 31.52 2.75
2385 2587 4.076175 ACAACCCCCTGTACTTATCTCT 57.924 45.455 0.00 0.00 0.00 3.10
2386 2588 3.775316 ACAACCCCCTGTACTTATCTCTG 59.225 47.826 0.00 0.00 0.00 3.35
2387 2589 4.030913 CAACCCCCTGTACTTATCTCTGA 58.969 47.826 0.00 0.00 0.00 3.27
2388 2590 4.348020 ACCCCCTGTACTTATCTCTGAA 57.652 45.455 0.00 0.00 0.00 3.02
2389 2591 4.290942 ACCCCCTGTACTTATCTCTGAAG 58.709 47.826 0.00 0.00 0.00 3.02
2390 2592 4.016479 ACCCCCTGTACTTATCTCTGAAGA 60.016 45.833 0.00 0.00 35.54 2.87
2391 2593 4.962995 CCCCCTGTACTTATCTCTGAAGAA 59.037 45.833 0.00 0.00 34.49 2.52
2392 2594 5.069781 CCCCCTGTACTTATCTCTGAAGAAG 59.930 48.000 0.00 0.00 34.49 2.85
2393 2595 5.069781 CCCCTGTACTTATCTCTGAAGAAGG 59.930 48.000 0.00 0.00 34.49 3.46
2394 2596 5.659079 CCCTGTACTTATCTCTGAAGAAGGT 59.341 44.000 0.00 0.00 34.49 3.50
2395 2597 6.406400 CCCTGTACTTATCTCTGAAGAAGGTG 60.406 46.154 0.00 0.00 34.49 4.00
2396 2598 6.153680 CCTGTACTTATCTCTGAAGAAGGTGT 59.846 42.308 0.00 0.00 34.49 4.16
2397 2599 7.310113 CCTGTACTTATCTCTGAAGAAGGTGTT 60.310 40.741 0.00 0.00 34.49 3.32
2398 2600 8.645814 TGTACTTATCTCTGAAGAAGGTGTTA 57.354 34.615 0.00 0.00 34.49 2.41
2399 2601 8.740906 TGTACTTATCTCTGAAGAAGGTGTTAG 58.259 37.037 0.00 0.00 34.49 2.34
2400 2602 7.784470 ACTTATCTCTGAAGAAGGTGTTAGT 57.216 36.000 0.00 0.00 34.49 2.24
2401 2603 7.607250 ACTTATCTCTGAAGAAGGTGTTAGTG 58.393 38.462 0.00 0.00 34.49 2.74
2402 2604 7.233757 ACTTATCTCTGAAGAAGGTGTTAGTGT 59.766 37.037 0.00 0.00 34.49 3.55
2403 2605 5.871396 TCTCTGAAGAAGGTGTTAGTGTT 57.129 39.130 0.00 0.00 0.00 3.32
2404 2606 6.235231 TCTCTGAAGAAGGTGTTAGTGTTT 57.765 37.500 0.00 0.00 0.00 2.83
2405 2607 7.356089 TCTCTGAAGAAGGTGTTAGTGTTTA 57.644 36.000 0.00 0.00 0.00 2.01
2406 2608 7.434492 TCTCTGAAGAAGGTGTTAGTGTTTAG 58.566 38.462 0.00 0.00 0.00 1.85
2407 2609 7.287005 TCTCTGAAGAAGGTGTTAGTGTTTAGA 59.713 37.037 0.00 0.00 0.00 2.10
2408 2610 7.208080 TCTGAAGAAGGTGTTAGTGTTTAGAC 58.792 38.462 0.00 0.00 0.00 2.59
2409 2611 7.069578 TCTGAAGAAGGTGTTAGTGTTTAGACT 59.930 37.037 0.00 0.00 0.00 3.24
2410 2612 7.562135 TGAAGAAGGTGTTAGTGTTTAGACTT 58.438 34.615 0.00 0.00 0.00 3.01
2411 2613 7.709613 TGAAGAAGGTGTTAGTGTTTAGACTTC 59.290 37.037 0.00 0.00 33.81 3.01
2412 2614 7.120923 AGAAGGTGTTAGTGTTTAGACTTCA 57.879 36.000 0.00 0.00 35.51 3.02
2413 2615 7.210873 AGAAGGTGTTAGTGTTTAGACTTCAG 58.789 38.462 0.00 0.00 35.51 3.02
2414 2616 6.726490 AGGTGTTAGTGTTTAGACTTCAGA 57.274 37.500 0.00 0.00 0.00 3.27
2415 2617 6.750148 AGGTGTTAGTGTTTAGACTTCAGAG 58.250 40.000 0.00 0.00 0.00 3.35
2416 2618 6.324254 AGGTGTTAGTGTTTAGACTTCAGAGT 59.676 38.462 0.00 0.00 39.32 3.24
2426 2628 3.372660 GACTTCAGAGTCGGTTCAGTT 57.627 47.619 0.00 0.00 42.60 3.16
2427 2629 3.718815 GACTTCAGAGTCGGTTCAGTTT 58.281 45.455 0.00 0.00 42.60 2.66
2428 2630 3.458189 ACTTCAGAGTCGGTTCAGTTTG 58.542 45.455 0.00 0.00 0.00 2.93
2429 2631 2.526304 TCAGAGTCGGTTCAGTTTGG 57.474 50.000 0.00 0.00 0.00 3.28
2430 2632 1.070134 TCAGAGTCGGTTCAGTTTGGG 59.930 52.381 0.00 0.00 0.00 4.12
2431 2633 0.250338 AGAGTCGGTTCAGTTTGGGC 60.250 55.000 0.00 0.00 0.00 5.36
2432 2634 0.250338 GAGTCGGTTCAGTTTGGGCT 60.250 55.000 0.00 0.00 0.00 5.19
2433 2635 0.182775 AGTCGGTTCAGTTTGGGCTT 59.817 50.000 0.00 0.00 0.00 4.35
2434 2636 1.029681 GTCGGTTCAGTTTGGGCTTT 58.970 50.000 0.00 0.00 0.00 3.51
2435 2637 1.028905 TCGGTTCAGTTTGGGCTTTG 58.971 50.000 0.00 0.00 0.00 2.77
2436 2638 0.597377 CGGTTCAGTTTGGGCTTTGC 60.597 55.000 0.00 0.00 0.00 3.68
2437 2639 0.463620 GGTTCAGTTTGGGCTTTGCA 59.536 50.000 0.00 0.00 0.00 4.08
2438 2640 1.538849 GGTTCAGTTTGGGCTTTGCAG 60.539 52.381 0.00 0.00 0.00 4.41
2439 2641 1.408702 GTTCAGTTTGGGCTTTGCAGA 59.591 47.619 0.00 0.00 0.00 4.26
2440 2642 1.999648 TCAGTTTGGGCTTTGCAGAT 58.000 45.000 0.00 0.00 0.00 2.90
2441 2643 1.888512 TCAGTTTGGGCTTTGCAGATC 59.111 47.619 0.00 0.00 0.00 2.75
2442 2644 1.614903 CAGTTTGGGCTTTGCAGATCA 59.385 47.619 0.00 0.00 0.00 2.92
2443 2645 2.232941 CAGTTTGGGCTTTGCAGATCAT 59.767 45.455 0.00 0.00 0.00 2.45
2444 2646 2.494870 AGTTTGGGCTTTGCAGATCATC 59.505 45.455 0.00 0.00 0.00 2.92
2445 2647 2.219080 TTGGGCTTTGCAGATCATCA 57.781 45.000 0.00 0.00 0.00 3.07
2446 2648 2.219080 TGGGCTTTGCAGATCATCAA 57.781 45.000 0.00 0.00 0.00 2.57
2447 2649 2.097036 TGGGCTTTGCAGATCATCAAG 58.903 47.619 0.00 0.00 0.00 3.02
2448 2650 2.291089 TGGGCTTTGCAGATCATCAAGA 60.291 45.455 0.00 0.00 0.00 3.02
2449 2651 2.756760 GGGCTTTGCAGATCATCAAGAA 59.243 45.455 0.00 0.00 0.00 2.52
2450 2652 3.383825 GGGCTTTGCAGATCATCAAGAAT 59.616 43.478 0.00 0.00 0.00 2.40
2451 2653 4.499357 GGGCTTTGCAGATCATCAAGAATC 60.499 45.833 0.00 0.00 0.00 2.52
2452 2654 4.338682 GGCTTTGCAGATCATCAAGAATCT 59.661 41.667 0.00 0.00 0.00 2.40
2453 2655 5.274718 GCTTTGCAGATCATCAAGAATCTG 58.725 41.667 7.77 7.77 42.37 2.90
2454 2656 5.163642 GCTTTGCAGATCATCAAGAATCTGT 60.164 40.000 12.47 0.00 41.72 3.41
2455 2657 6.625300 GCTTTGCAGATCATCAAGAATCTGTT 60.625 38.462 12.47 0.00 41.72 3.16
2456 2658 6.829229 TTGCAGATCATCAAGAATCTGTTT 57.171 33.333 12.47 0.00 41.72 2.83
2457 2659 6.432607 TGCAGATCATCAAGAATCTGTTTC 57.567 37.500 12.47 0.00 41.72 2.78
2458 2660 6.178324 TGCAGATCATCAAGAATCTGTTTCT 58.822 36.000 12.47 0.00 46.92 2.52
2471 2673 8.697507 AGAATCTGTTTCTTTTGGTAGTGAAT 57.302 30.769 0.00 0.00 42.15 2.57
2472 2674 9.793259 AGAATCTGTTTCTTTTGGTAGTGAATA 57.207 29.630 0.00 0.00 42.15 1.75
2475 2677 8.561738 TCTGTTTCTTTTGGTAGTGAATATCC 57.438 34.615 0.00 0.00 0.00 2.59
2476 2678 7.333423 TCTGTTTCTTTTGGTAGTGAATATCCG 59.667 37.037 0.00 0.00 0.00 4.18
2477 2679 7.162761 TGTTTCTTTTGGTAGTGAATATCCGA 58.837 34.615 0.00 0.00 0.00 4.55
2478 2680 7.662258 TGTTTCTTTTGGTAGTGAATATCCGAA 59.338 33.333 0.00 0.00 0.00 4.30
2479 2681 8.674607 GTTTCTTTTGGTAGTGAATATCCGAAT 58.325 33.333 0.00 0.00 0.00 3.34
2480 2682 8.433421 TTCTTTTGGTAGTGAATATCCGAATC 57.567 34.615 0.00 0.00 0.00 2.52
2481 2683 7.561251 TCTTTTGGTAGTGAATATCCGAATCA 58.439 34.615 0.00 0.00 0.00 2.57
2482 2684 7.494625 TCTTTTGGTAGTGAATATCCGAATCAC 59.505 37.037 0.00 0.00 42.91 3.06
2483 2685 5.209818 TGGTAGTGAATATCCGAATCACC 57.790 43.478 1.81 0.00 43.46 4.02
2484 2686 4.651962 TGGTAGTGAATATCCGAATCACCA 59.348 41.667 1.81 0.00 43.46 4.17
2485 2687 5.306937 TGGTAGTGAATATCCGAATCACCAT 59.693 40.000 1.81 0.00 43.46 3.55
2486 2688 6.183361 TGGTAGTGAATATCCGAATCACCATT 60.183 38.462 1.81 0.00 43.46 3.16
2487 2689 6.710744 GGTAGTGAATATCCGAATCACCATTT 59.289 38.462 1.81 0.00 43.46 2.32
2488 2690 7.876068 GGTAGTGAATATCCGAATCACCATTTA 59.124 37.037 1.81 0.00 43.46 1.40
2489 2691 7.730364 AGTGAATATCCGAATCACCATTTAC 57.270 36.000 1.81 0.00 43.46 2.01
2490 2692 7.509546 AGTGAATATCCGAATCACCATTTACT 58.490 34.615 1.81 0.00 43.46 2.24
2491 2693 8.647796 AGTGAATATCCGAATCACCATTTACTA 58.352 33.333 1.81 0.00 43.46 1.82
2492 2694 9.268268 GTGAATATCCGAATCACCATTTACTAA 57.732 33.333 0.00 0.00 37.97 2.24
2493 2695 9.268268 TGAATATCCGAATCACCATTTACTAAC 57.732 33.333 0.00 0.00 0.00 2.34
2494 2696 9.268268 GAATATCCGAATCACCATTTACTAACA 57.732 33.333 0.00 0.00 0.00 2.41
2495 2697 6.920569 ATCCGAATCACCATTTACTAACAC 57.079 37.500 0.00 0.00 0.00 3.32
2496 2698 6.045072 TCCGAATCACCATTTACTAACACT 57.955 37.500 0.00 0.00 0.00 3.55
2497 2699 7.172868 TCCGAATCACCATTTACTAACACTA 57.827 36.000 0.00 0.00 0.00 2.74
2498 2700 7.262772 TCCGAATCACCATTTACTAACACTAG 58.737 38.462 0.00 0.00 0.00 2.57
2499 2701 7.039882 CCGAATCACCATTTACTAACACTAGT 58.960 38.462 0.00 0.00 41.43 2.57
2500 2702 7.222224 CCGAATCACCATTTACTAACACTAGTC 59.778 40.741 0.00 0.00 39.23 2.59
2501 2703 7.758076 CGAATCACCATTTACTAACACTAGTCA 59.242 37.037 0.00 0.00 39.23 3.41
2502 2704 8.773404 AATCACCATTTACTAACACTAGTCAC 57.227 34.615 0.00 0.00 39.23 3.67
2503 2705 7.292713 TCACCATTTACTAACACTAGTCACA 57.707 36.000 0.00 0.00 39.23 3.58
2504 2706 7.903145 TCACCATTTACTAACACTAGTCACAT 58.097 34.615 0.00 0.00 39.23 3.21
2505 2707 8.033038 TCACCATTTACTAACACTAGTCACATC 58.967 37.037 0.00 0.00 39.23 3.06
2506 2708 7.817478 CACCATTTACTAACACTAGTCACATCA 59.183 37.037 0.00 0.00 39.23 3.07
2507 2709 8.035394 ACCATTTACTAACACTAGTCACATCAG 58.965 37.037 0.00 0.00 39.23 2.90
2508 2710 7.492669 CCATTTACTAACACTAGTCACATCAGG 59.507 40.741 0.00 0.00 39.23 3.86
2509 2711 4.457834 ACTAACACTAGTCACATCAGGC 57.542 45.455 0.00 0.00 32.61 4.85
2510 2712 4.090090 ACTAACACTAGTCACATCAGGCT 58.910 43.478 0.00 0.00 32.61 4.58
2511 2713 3.601443 AACACTAGTCACATCAGGCTC 57.399 47.619 0.00 0.00 0.00 4.70
2512 2714 2.529632 ACACTAGTCACATCAGGCTCA 58.470 47.619 0.00 0.00 0.00 4.26
2513 2715 3.102972 ACACTAGTCACATCAGGCTCAT 58.897 45.455 0.00 0.00 0.00 2.90
2514 2716 3.517100 ACACTAGTCACATCAGGCTCATT 59.483 43.478 0.00 0.00 0.00 2.57
2515 2717 4.711846 ACACTAGTCACATCAGGCTCATTA 59.288 41.667 0.00 0.00 0.00 1.90
2516 2718 5.187772 ACACTAGTCACATCAGGCTCATTAA 59.812 40.000 0.00 0.00 0.00 1.40
2517 2719 6.126940 ACACTAGTCACATCAGGCTCATTAAT 60.127 38.462 0.00 0.00 0.00 1.40
2518 2720 6.765036 CACTAGTCACATCAGGCTCATTAATT 59.235 38.462 0.00 0.00 0.00 1.40
2519 2721 7.281774 CACTAGTCACATCAGGCTCATTAATTT 59.718 37.037 0.00 0.00 0.00 1.82
2520 2722 7.831193 ACTAGTCACATCAGGCTCATTAATTTT 59.169 33.333 0.00 0.00 0.00 1.82
2521 2723 6.860080 AGTCACATCAGGCTCATTAATTTTG 58.140 36.000 0.00 0.00 0.00 2.44
2522 2724 6.435277 AGTCACATCAGGCTCATTAATTTTGT 59.565 34.615 0.00 0.00 0.00 2.83
2523 2725 7.611467 AGTCACATCAGGCTCATTAATTTTGTA 59.389 33.333 0.00 0.00 0.00 2.41
2524 2726 7.698130 GTCACATCAGGCTCATTAATTTTGTAC 59.302 37.037 0.00 0.00 0.00 2.90
2525 2727 7.611467 TCACATCAGGCTCATTAATTTTGTACT 59.389 33.333 0.00 0.00 0.00 2.73
2526 2728 8.246180 CACATCAGGCTCATTAATTTTGTACTT 58.754 33.333 0.00 0.00 0.00 2.24
2527 2729 8.806146 ACATCAGGCTCATTAATTTTGTACTTT 58.194 29.630 0.00 0.00 0.00 2.66
2558 2760 8.924303 ACTGTATACCATAAATCTTAGACTGCA 58.076 33.333 0.00 0.00 0.00 4.41
2568 2770 7.992754 AAATCTTAGACTGCAATTCTTCAGT 57.007 32.000 2.93 4.69 45.32 3.41
2569 2771 7.992754 AATCTTAGACTGCAATTCTTCAGTT 57.007 32.000 2.93 0.00 42.97 3.16
2570 2772 6.791887 TCTTAGACTGCAATTCTTCAGTTG 57.208 37.500 2.93 0.00 42.97 3.16
2664 6391 4.936411 AGTTCAGACTTTGCAGATCATCAG 59.064 41.667 0.00 0.00 29.87 2.90
2669 6396 5.007823 CAGACTTTGCAGATCATCAGGAATC 59.992 44.000 0.00 0.00 0.00 2.52
2693 6420 6.919662 TCTGTTTCTTGTGCTGATGAATTTTC 59.080 34.615 0.00 0.00 0.00 2.29
2695 6422 7.267128 TGTTTCTTGTGCTGATGAATTTTCTT 58.733 30.769 0.00 0.00 0.00 2.52
2702 6429 7.894708 TGTGCTGATGAATTTTCTTTATTGGA 58.105 30.769 0.00 0.00 0.00 3.53
2705 6432 9.206870 TGCTGATGAATTTTCTTTATTGGAAAC 57.793 29.630 0.00 0.00 33.22 2.78
2708 6435 9.709495 TGATGAATTTTCTTTATTGGAAACCAG 57.291 29.630 0.00 0.00 33.81 4.00
2709 6436 9.710900 GATGAATTTTCTTTATTGGAAACCAGT 57.289 29.630 0.00 0.00 33.81 4.00
2742 6469 5.312895 TGCATCACCATTTACTAACACTGT 58.687 37.500 0.00 0.00 0.00 3.55
2746 6520 6.978343 TCACCATTTACTAACACTGTATGC 57.022 37.500 0.00 0.00 0.00 3.14
2778 6552 9.865321 CTGCTAGTATTTTACAAGTTGGTAGTA 57.135 33.333 7.96 0.00 0.00 1.82
2793 6567 5.130705 TGGTAGTATCTCATCCTCACTGT 57.869 43.478 0.00 0.00 0.00 3.55
2963 6737 4.201980 ACATTCAGCAATTCATCCATCACG 60.202 41.667 0.00 0.00 0.00 4.35
3091 6865 6.907741 AGAAGTACGAAGACTACAAGGTAAC 58.092 40.000 0.00 0.00 0.00 2.50
3105 6881 5.183228 ACAAGGTAACACATACATAGTGCC 58.817 41.667 0.00 0.00 40.59 5.01
3184 6960 6.713762 TCACAAGAAACCTGAATCAACAAT 57.286 33.333 0.00 0.00 0.00 2.71
3186 6962 8.231692 TCACAAGAAACCTGAATCAACAATTA 57.768 30.769 0.00 0.00 0.00 1.40
3197 6974 9.426837 CCTGAATCAACAATTAAATGTGTGAAT 57.573 29.630 0.00 0.00 32.81 2.57
3207 6984 3.928727 AATGTGTGAATCCTTGTGCTG 57.071 42.857 0.00 0.00 0.00 4.41
3298 7077 1.134788 GGTCGGAACATCGATCACCTT 60.135 52.381 0.00 0.00 41.40 3.50
3299 7078 1.927174 GTCGGAACATCGATCACCTTG 59.073 52.381 0.00 0.00 41.40 3.61
3381 7165 5.536161 ACACTTAATCATCTTGTTTGGCTGT 59.464 36.000 0.00 0.00 0.00 4.40
3398 7186 3.300009 GCTGTACTGCATTTGTGAACAC 58.700 45.455 18.75 0.00 0.00 3.32
3660 7448 6.595716 AGGTACTACAATGCATTCTTCTGAAC 59.404 38.462 9.53 2.50 36.02 3.18
3663 7451 9.151471 GTACTACAATGCATTCTTCTGAACTTA 57.849 33.333 9.53 0.00 34.71 2.24
3664 7452 8.798859 ACTACAATGCATTCTTCTGAACTTAT 57.201 30.769 9.53 0.00 34.71 1.73
3701 7489 8.514330 TTTTGTTTCAGTATAGTTTGAGTGGT 57.486 30.769 0.00 0.00 0.00 4.16
3704 7492 9.616156 TTGTTTCAGTATAGTTTGAGTGGTTTA 57.384 29.630 0.00 0.00 0.00 2.01
3711 7499 8.730680 AGTATAGTTTGAGTGGTTTAATGCAAG 58.269 33.333 0.00 0.00 0.00 4.01
3720 7508 5.920273 AGTGGTTTAATGCAAGAATTCAACG 59.080 36.000 8.44 0.00 28.59 4.10
3721 7509 4.683781 TGGTTTAATGCAAGAATTCAACGC 59.316 37.500 8.44 7.46 28.59 4.84
3722 7510 4.683781 GGTTTAATGCAAGAATTCAACGCA 59.316 37.500 15.83 15.83 36.95 5.24
3740 7547 1.800805 CAAGTGGTGCTGAATCTCGT 58.199 50.000 0.00 0.00 0.00 4.18
3748 7555 2.058798 TGCTGAATCTCGTGTCGTTTC 58.941 47.619 0.00 0.00 0.00 2.78
3750 7557 1.649171 CTGAATCTCGTGTCGTTTCGG 59.351 52.381 0.00 0.00 0.00 4.30
3751 7558 1.001048 TGAATCTCGTGTCGTTTCGGT 60.001 47.619 0.00 0.00 0.00 4.69
3761 7568 1.135199 GTCGTTTCGGTGATGCTAGGA 60.135 52.381 0.00 0.00 0.00 2.94
3776 7583 4.667573 TGCTAGGAATCGACTGGATAGAT 58.332 43.478 0.00 0.00 34.08 1.98
3800 7607 2.810852 CAGGAAGCAACTGAAGAAGTCC 59.189 50.000 0.00 0.00 38.56 3.85
3826 7633 4.673580 GCAATGGAACGTCGAAGTCTACTA 60.674 45.833 4.00 0.00 0.00 1.82
3828 7635 4.410492 TGGAACGTCGAAGTCTACTAAC 57.590 45.455 4.00 0.00 0.00 2.34
3836 7643 5.392286 GTCGAAGTCTACTAACTCTTGTGG 58.608 45.833 0.00 0.00 0.00 4.17
3847 7654 5.703130 ACTAACTCTTGTGGCTTTCATTCTC 59.297 40.000 0.00 0.00 0.00 2.87
3849 7656 3.244215 ACTCTTGTGGCTTTCATTCTCGA 60.244 43.478 0.00 0.00 0.00 4.04
3936 7751 7.668525 AAAAAGTAGATATAGGGCGTATTGC 57.331 36.000 4.88 0.00 45.38 3.56
3947 7762 2.415512 GGGCGTATTGCTTCCGATATTC 59.584 50.000 0.00 0.00 45.43 1.75
3949 7764 3.368236 GGCGTATTGCTTCCGATATTCTC 59.632 47.826 0.00 0.00 45.43 2.87
3954 7769 6.034363 CGTATTGCTTCCGATATTCTCTCATG 59.966 42.308 0.00 0.00 0.00 3.07
4003 7819 9.967346 TTAAATACACTACTATCTCATGTCTGC 57.033 33.333 0.00 0.00 0.00 4.26
4004 7820 7.831691 AATACACTACTATCTCATGTCTGCT 57.168 36.000 0.00 0.00 0.00 4.24
4005 7821 5.766150 ACACTACTATCTCATGTCTGCTC 57.234 43.478 0.00 0.00 0.00 4.26
4007 7823 5.654209 ACACTACTATCTCATGTCTGCTCAA 59.346 40.000 0.00 0.00 0.00 3.02
4008 7824 6.153510 ACACTACTATCTCATGTCTGCTCAAA 59.846 38.462 0.00 0.00 0.00 2.69
4009 7825 7.038048 CACTACTATCTCATGTCTGCTCAAAA 58.962 38.462 0.00 0.00 0.00 2.44
4013 7829 7.983307 ACTATCTCATGTCTGCTCAAAATTTC 58.017 34.615 0.00 0.00 0.00 2.17
4019 7835 3.243367 TGTCTGCTCAAAATTTCCCAACG 60.243 43.478 0.00 0.00 0.00 4.10
4021 7837 1.270041 TGCTCAAAATTTCCCAACGGC 60.270 47.619 0.00 0.00 0.00 5.68
4032 7848 0.523072 CCCAACGGCATTTCACTCAG 59.477 55.000 0.00 0.00 0.00 3.35
4051 7867 3.319689 TCAGATAATGCCATTGCCATGTG 59.680 43.478 0.00 0.00 36.33 3.21
4086 7904 9.143631 ACAAATTTGCAGTTAATTAGAGCATTC 57.856 29.630 18.12 0.00 34.87 2.67
4187 8012 6.869695 TCTGATGTCGCTATTAGTTTTGGTA 58.130 36.000 0.00 0.00 0.00 3.25
4255 8080 4.012374 ACCTAAACAGCTTCATGACATGG 58.988 43.478 15.37 1.62 0.00 3.66
4317 8148 4.452114 TGATCTCACAAGAACATGGAAACG 59.548 41.667 0.00 0.00 34.49 3.60
4330 8162 5.961272 ACATGGAAACGAAAACTGAAAAGT 58.039 33.333 0.00 0.00 0.00 2.66
4373 8210 1.953686 CACTTGTTAACACCCACCCAG 59.046 52.381 8.07 3.71 0.00 4.45
4374 8211 1.847737 ACTTGTTAACACCCACCCAGA 59.152 47.619 8.07 0.00 0.00 3.86
4376 8213 2.577606 TGTTAACACCCACCCAGATG 57.422 50.000 3.59 0.00 0.00 2.90
4380 8217 0.827507 AACACCCACCCAGATGCAAC 60.828 55.000 0.00 0.00 0.00 4.17
4405 8242 2.568623 GAGGGCTCCTCTGTTTTTCA 57.431 50.000 12.53 0.00 46.41 2.69
4406 8243 2.431454 GAGGGCTCCTCTGTTTTTCAG 58.569 52.381 12.53 0.00 46.41 3.02
4407 8244 0.884514 GGGCTCCTCTGTTTTTCAGC 59.115 55.000 0.00 0.00 43.32 4.26
4408 8245 0.884514 GGCTCCTCTGTTTTTCAGCC 59.115 55.000 0.00 0.00 43.32 4.85
4409 8246 1.546548 GGCTCCTCTGTTTTTCAGCCT 60.547 52.381 0.34 0.00 43.32 4.58
4410 8247 1.538950 GCTCCTCTGTTTTTCAGCCTG 59.461 52.381 0.00 0.00 43.32 4.85
4413 8250 2.172505 TCCTCTGTTTTTCAGCCTGTGA 59.827 45.455 0.00 0.00 43.32 3.58
4414 8251 2.551459 CCTCTGTTTTTCAGCCTGTGAG 59.449 50.000 0.00 0.00 43.32 3.51
4415 8252 3.209410 CTCTGTTTTTCAGCCTGTGAGT 58.791 45.455 0.00 0.00 43.32 3.41
4416 8253 3.206150 TCTGTTTTTCAGCCTGTGAGTC 58.794 45.455 0.00 0.00 43.32 3.36
4417 8254 3.118261 TCTGTTTTTCAGCCTGTGAGTCT 60.118 43.478 0.00 0.00 43.32 3.24
4418 8255 3.620488 TGTTTTTCAGCCTGTGAGTCTT 58.380 40.909 0.00 0.00 36.21 3.01
4419 8256 3.378112 TGTTTTTCAGCCTGTGAGTCTTG 59.622 43.478 0.00 0.00 36.21 3.02
4420 8257 3.558931 TTTTCAGCCTGTGAGTCTTGA 57.441 42.857 0.00 0.00 36.21 3.02
4421 8258 3.558931 TTTCAGCCTGTGAGTCTTGAA 57.441 42.857 0.00 0.00 36.21 2.69
4458 8301 1.333619 GCACCTGTACCTGTTGTTGTG 59.666 52.381 0.00 0.00 0.00 3.33
4461 8304 1.946768 CCTGTACCTGTTGTTGTGGTG 59.053 52.381 0.00 0.00 35.48 4.17
4463 8306 1.282447 TGTACCTGTTGTTGTGGTGGT 59.718 47.619 0.00 0.00 35.48 4.16
4466 8309 1.181786 CCTGTTGTTGTGGTGGTTGT 58.818 50.000 0.00 0.00 0.00 3.32
4469 8312 1.964223 TGTTGTTGTGGTGGTTGTTGT 59.036 42.857 0.00 0.00 0.00 3.32
4523 8369 2.229784 GTCATCCTCTGCAACTTTTGGG 59.770 50.000 0.00 0.00 0.00 4.12
4598 8444 0.834261 TCACCAACACCGATCCCAGA 60.834 55.000 0.00 0.00 0.00 3.86
4663 8516 3.779738 TCAATCATGGGTGGACACTATGA 59.220 43.478 18.03 18.03 38.33 2.15
4664 8517 4.132336 CAATCATGGGTGGACACTATGAG 58.868 47.826 19.41 9.81 37.83 2.90
4677 8530 2.430694 CACTATGAGGTTGGACCATCGA 59.569 50.000 0.00 0.00 41.95 3.59
4733 8590 7.904558 AACTCTGAATCTGGATGTACTATGA 57.095 36.000 0.00 0.00 0.00 2.15
4754 8611 0.036388 CGGTGCTAGTGGAATGGTGT 60.036 55.000 0.00 0.00 0.00 4.16
4760 8617 2.426522 CTAGTGGAATGGTGTGGTGTG 58.573 52.381 0.00 0.00 0.00 3.82
4763 8620 0.467106 TGGAATGGTGTGGTGTGGTG 60.467 55.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 7.547722 GGGTACAAAATTATGATGAAAACCCAC 59.452 37.037 0.00 0.00 0.00 4.61
126 250 6.015856 CCATTGTATAACACCAAAAGGTCACA 60.016 38.462 0.00 0.00 0.00 3.58
173 297 1.067295 ACATGGCTTTGTCTCCCTCA 58.933 50.000 0.00 0.00 0.00 3.86
212 336 0.605319 CGCCAATACTGTGGTGGTGT 60.605 55.000 13.85 0.00 44.09 4.16
328 453 0.519077 GAGCGAGGCCTGAAGTTTTG 59.481 55.000 12.00 0.00 0.00 2.44
384 510 8.523658 AGCCCAAATGAATTTTTCTTACTAGTC 58.476 33.333 0.00 0.00 0.00 2.59
388 514 7.093333 CCCTAGCCCAAATGAATTTTTCTTACT 60.093 37.037 0.00 0.00 0.00 2.24
451 577 9.158364 GTGAATTAACAAGCATGATATACAACG 57.842 33.333 0.00 0.00 0.00 4.10
488 614 1.304381 GGGCCCATCTTCAAGCACA 60.304 57.895 19.95 0.00 0.00 4.57
499 625 2.930562 GCCTATCCTCGGGCCCAT 60.931 66.667 24.92 10.40 42.30 4.00
505 631 2.912542 TCGCCTGCCTATCCTCGG 60.913 66.667 0.00 0.00 0.00 4.63
509 635 1.825281 ATGAGCTCGCCTGCCTATCC 61.825 60.000 9.64 0.00 0.00 2.59
511 637 1.670590 GATGAGCTCGCCTGCCTAT 59.329 57.895 9.64 0.00 0.00 2.57
521 647 0.596083 CCACCGATGACGATGAGCTC 60.596 60.000 6.82 6.82 42.66 4.09
526 652 1.946156 CTCGCCACCGATGACGATG 60.946 63.158 0.00 0.00 43.47 3.84
530 656 0.318275 GATCTCTCGCCACCGATGAC 60.318 60.000 0.00 0.00 43.47 3.06
531 657 1.456196 GGATCTCTCGCCACCGATGA 61.456 60.000 0.00 0.00 43.47 2.92
532 658 1.006805 GGATCTCTCGCCACCGATG 60.007 63.158 0.00 0.00 43.47 3.84
533 659 2.556459 CGGATCTCTCGCCACCGAT 61.556 63.158 0.00 0.00 45.31 4.18
534 660 3.209812 CGGATCTCTCGCCACCGA 61.210 66.667 0.00 0.00 45.31 4.69
535 661 4.933064 GCGGATCTCTCGCCACCG 62.933 72.222 3.75 0.00 46.55 4.94
594 720 2.831526 GCTTCCTCTTCCTCTTCTCTGT 59.168 50.000 0.00 0.00 0.00 3.41
596 722 3.365472 GAGCTTCCTCTTCCTCTTCTCT 58.635 50.000 0.00 0.00 35.16 3.10
597 723 2.430694 GGAGCTTCCTCTTCCTCTTCTC 59.569 54.545 0.00 0.00 38.21 2.87
601 727 0.415429 TGGGAGCTTCCTCTTCCTCT 59.585 55.000 13.68 0.00 38.21 3.69
604 730 0.915364 ACATGGGAGCTTCCTCTTCC 59.085 55.000 13.68 0.00 38.21 3.46
632 758 1.890041 CCACAAAAGTGCCGTCGGA 60.890 57.895 17.49 0.00 0.00 4.55
639 765 0.388659 TGTCATGGCCACAAAAGTGC 59.611 50.000 8.16 0.00 0.00 4.40
673 799 4.492160 CTGCCTGCCTGCATTGCG 62.492 66.667 3.84 0.00 41.16 4.85
692 822 5.235186 GTCCATCGAATCCAACAAGTATCTG 59.765 44.000 0.00 0.00 0.00 2.90
718 848 8.498575 TCTGTCTCTCTCTAGGAAAGATTCATA 58.501 37.037 0.00 0.00 32.41 2.15
719 849 7.353525 TCTGTCTCTCTCTAGGAAAGATTCAT 58.646 38.462 0.00 0.00 32.41 2.57
750 880 6.674419 ACCCACCAAAACTATCTTCTCTCTAT 59.326 38.462 0.00 0.00 0.00 1.98
862 1000 0.179936 GGAGATGAGTGGAAGGCAGG 59.820 60.000 0.00 0.00 0.00 4.85
886 1024 1.062044 GGGAGGGAAGGTGGATAGAGT 60.062 57.143 0.00 0.00 0.00 3.24
887 1025 1.723288 GGGAGGGAAGGTGGATAGAG 58.277 60.000 0.00 0.00 0.00 2.43
890 1028 1.764854 GCGGGAGGGAAGGTGGATA 60.765 63.158 0.00 0.00 0.00 2.59
892 1030 4.332543 AGCGGGAGGGAAGGTGGA 62.333 66.667 0.00 0.00 0.00 4.02
928 1066 4.153330 GGGAGGGTAGCGGGGAGA 62.153 72.222 0.00 0.00 0.00 3.71
962 1127 2.421739 GTGGGTGGGGATCGATCG 59.578 66.667 18.81 9.36 0.00 3.69
1044 1221 3.702623 GGGGAGGGGGAGGTGGTA 61.703 72.222 0.00 0.00 0.00 3.25
1501 1684 0.322816 AGCAGTGCCAATGGATCGTT 60.323 50.000 12.58 0.00 0.00 3.85
1502 1685 0.322816 AAGCAGTGCCAATGGATCGT 60.323 50.000 12.58 0.00 0.00 3.73
1505 1688 1.180029 GACAAGCAGTGCCAATGGAT 58.820 50.000 12.58 0.00 0.00 3.41
1610 1797 2.290577 ACAGAGGAAATTGGAGCAGACC 60.291 50.000 0.00 0.00 0.00 3.85
1645 1832 3.494749 GCAGATTTCCTCATCTCTGGGAG 60.495 52.174 0.00 0.00 36.48 4.30
1648 1835 3.555527 TGCAGATTTCCTCATCTCTGG 57.444 47.619 0.00 0.00 36.48 3.86
1671 1858 2.688507 TCAGATTGTTGAGAGCCGAAC 58.311 47.619 0.00 0.00 0.00 3.95
1698 1891 5.479716 ACCGAACACTGTTAAGTTTGAAG 57.520 39.130 0.00 0.00 32.98 3.02
1703 1896 6.594937 TGAACTAAACCGAACACTGTTAAGTT 59.405 34.615 0.00 0.00 32.98 2.66
1718 1915 4.201881 ACTGCAAAACGTCTGAACTAAACC 60.202 41.667 1.95 0.00 0.00 3.27
1730 1927 4.393062 CCTGATATCTGAACTGCAAAACGT 59.607 41.667 10.93 0.00 0.00 3.99
1732 1929 6.317140 TCATCCTGATATCTGAACTGCAAAAC 59.683 38.462 10.93 0.00 0.00 2.43
1783 1982 8.469309 AATAATAGCATTAGCAGGAATGTGTT 57.531 30.769 7.55 4.19 45.49 3.32
1809 2008 9.459640 CAGAGATAATTACTTTGGATTGCATTG 57.540 33.333 0.00 0.00 0.00 2.82
1823 2023 6.865205 GCCAAATCCATTGCAGAGATAATTAC 59.135 38.462 0.00 0.00 37.73 1.89
1851 2052 3.014623 ACATCAGTGGAGATCGTACGAA 58.985 45.455 23.56 1.59 0.00 3.85
1853 2054 3.065510 AGAACATCAGTGGAGATCGTACG 59.934 47.826 9.53 9.53 0.00 3.67
1854 2055 4.640789 AGAACATCAGTGGAGATCGTAC 57.359 45.455 0.00 0.00 0.00 3.67
1855 2056 4.950475 AGAAGAACATCAGTGGAGATCGTA 59.050 41.667 0.00 0.00 0.00 3.43
1856 2057 3.766591 AGAAGAACATCAGTGGAGATCGT 59.233 43.478 0.00 0.00 0.00 3.73
1857 2058 4.111198 CAGAAGAACATCAGTGGAGATCG 58.889 47.826 0.00 0.00 0.00 3.69
1859 2060 5.243981 CAACAGAAGAACATCAGTGGAGAT 58.756 41.667 0.00 0.00 0.00 2.75
1861 2062 3.188048 GCAACAGAAGAACATCAGTGGAG 59.812 47.826 0.00 0.00 0.00 3.86
1862 2063 3.141398 GCAACAGAAGAACATCAGTGGA 58.859 45.455 0.00 0.00 0.00 4.02
1863 2064 2.880268 TGCAACAGAAGAACATCAGTGG 59.120 45.455 0.00 0.00 0.00 4.00
1864 2065 4.761235 ATGCAACAGAAGAACATCAGTG 57.239 40.909 0.00 0.00 0.00 3.66
1865 2066 4.558095 GCAATGCAACAGAAGAACATCAGT 60.558 41.667 0.00 0.00 0.00 3.41
1866 2067 3.918591 GCAATGCAACAGAAGAACATCAG 59.081 43.478 0.00 0.00 0.00 2.90
1867 2068 3.318557 TGCAATGCAACAGAAGAACATCA 59.681 39.130 5.01 0.00 34.76 3.07
1868 2069 3.904571 TGCAATGCAACAGAAGAACATC 58.095 40.909 5.01 0.00 34.76 3.06
1895 2096 8.831372 CGATTGATTTTTCGAAAAGAAGTACAG 58.169 33.333 21.53 9.10 40.40 2.74
1896 2097 7.322699 GCGATTGATTTTTCGAAAAGAAGTACA 59.677 33.333 21.53 13.68 40.40 2.90
1897 2098 7.534239 AGCGATTGATTTTTCGAAAAGAAGTAC 59.466 33.333 21.53 12.90 40.40 2.73
1898 2099 7.581476 AGCGATTGATTTTTCGAAAAGAAGTA 58.419 30.769 21.53 8.73 40.40 2.24
1899 2100 6.438763 AGCGATTGATTTTTCGAAAAGAAGT 58.561 32.000 21.53 10.62 40.40 3.01
1900 2101 6.918043 AGCGATTGATTTTTCGAAAAGAAG 57.082 33.333 21.53 11.87 40.40 2.85
1902 2103 7.015289 CACTAGCGATTGATTTTTCGAAAAGA 58.985 34.615 21.53 13.86 37.55 2.52
1994 2195 8.865001 CACTACTGAGTTTGAAAATAGCTACTC 58.135 37.037 0.00 0.00 31.73 2.59
2007 2208 6.450545 TGAGAATGAGACACTACTGAGTTTG 58.549 40.000 0.00 0.00 31.73 2.93
2014 2215 9.290988 ACGATATAATGAGAATGAGACACTACT 57.709 33.333 0.00 0.00 0.00 2.57
2015 2216 9.335891 CACGATATAATGAGAATGAGACACTAC 57.664 37.037 0.00 0.00 0.00 2.73
2020 2221 6.393990 AGCCACGATATAATGAGAATGAGAC 58.606 40.000 0.00 0.00 0.00 3.36
2046 2247 6.435591 TCAGACATAAGTATAGGAGGATGCAG 59.564 42.308 0.00 0.00 0.00 4.41
2085 2286 1.048601 ACCGACTCTGAAGCCTGAAA 58.951 50.000 0.00 0.00 0.00 2.69
2163 2364 7.675062 AGATGACTAGCCTTAGTAAATGATGG 58.325 38.462 0.00 0.00 40.21 3.51
2177 2378 1.407936 TGAGCCTGAGATGACTAGCC 58.592 55.000 0.00 0.00 0.00 3.93
2206 2407 5.832595 TCATGGATTCCAGTGAAGAAAACAA 59.167 36.000 11.78 0.00 36.75 2.83
2266 2468 6.403527 CGAGTTGCAAAACCATGATAATGAGA 60.404 38.462 0.00 0.00 0.00 3.27
2267 2469 5.740569 CGAGTTGCAAAACCATGATAATGAG 59.259 40.000 0.00 0.00 0.00 2.90
2268 2470 5.392919 CCGAGTTGCAAAACCATGATAATGA 60.393 40.000 0.00 0.00 0.00 2.57
2269 2471 4.799949 CCGAGTTGCAAAACCATGATAATG 59.200 41.667 0.00 0.00 0.00 1.90
2270 2472 4.462483 ACCGAGTTGCAAAACCATGATAAT 59.538 37.500 0.00 0.00 0.00 1.28
2271 2473 3.823873 ACCGAGTTGCAAAACCATGATAA 59.176 39.130 0.00 0.00 0.00 1.75
2272 2474 3.417101 ACCGAGTTGCAAAACCATGATA 58.583 40.909 0.00 0.00 0.00 2.15
2273 2475 2.238521 ACCGAGTTGCAAAACCATGAT 58.761 42.857 0.00 0.00 0.00 2.45
2274 2476 1.686355 ACCGAGTTGCAAAACCATGA 58.314 45.000 0.00 0.00 0.00 3.07
2275 2477 2.552315 ACTACCGAGTTGCAAAACCATG 59.448 45.455 0.00 0.00 28.61 3.66
2276 2478 2.552315 CACTACCGAGTTGCAAAACCAT 59.448 45.455 0.00 0.00 31.73 3.55
2277 2479 1.944024 CACTACCGAGTTGCAAAACCA 59.056 47.619 0.00 0.00 31.73 3.67
2278 2480 1.944709 ACACTACCGAGTTGCAAAACC 59.055 47.619 0.00 0.00 31.73 3.27
2279 2481 2.353579 ACACACTACCGAGTTGCAAAAC 59.646 45.455 0.00 0.00 31.73 2.43
2280 2482 2.610374 GACACACTACCGAGTTGCAAAA 59.390 45.455 0.00 0.00 31.73 2.44
2281 2483 2.206750 GACACACTACCGAGTTGCAAA 58.793 47.619 0.00 0.00 31.73 3.68
2282 2484 1.137282 TGACACACTACCGAGTTGCAA 59.863 47.619 0.00 0.00 31.73 4.08
2283 2485 0.747852 TGACACACTACCGAGTTGCA 59.252 50.000 0.00 0.00 31.73 4.08
2284 2486 2.080286 ATGACACACTACCGAGTTGC 57.920 50.000 0.00 0.00 31.73 4.17
2285 2487 3.914312 AGAATGACACACTACCGAGTTG 58.086 45.455 0.00 0.00 31.73 3.16
2286 2488 3.572682 TGAGAATGACACACTACCGAGTT 59.427 43.478 0.00 0.00 31.73 3.01
2287 2489 3.154710 TGAGAATGACACACTACCGAGT 58.845 45.455 0.00 0.00 35.80 4.18
2288 2490 3.850122 TGAGAATGACACACTACCGAG 57.150 47.619 0.00 0.00 0.00 4.63
2289 2491 4.801330 AATGAGAATGACACACTACCGA 57.199 40.909 0.00 0.00 0.00 4.69
2290 2492 5.692204 GGATAATGAGAATGACACACTACCG 59.308 44.000 0.00 0.00 0.00 4.02
2291 2493 6.703607 CAGGATAATGAGAATGACACACTACC 59.296 42.308 0.00 0.00 0.00 3.18
2292 2494 6.703607 CCAGGATAATGAGAATGACACACTAC 59.296 42.308 0.00 0.00 0.00 2.73
2293 2495 6.686378 GCCAGGATAATGAGAATGACACACTA 60.686 42.308 0.00 0.00 0.00 2.74
2294 2496 5.678583 CCAGGATAATGAGAATGACACACT 58.321 41.667 0.00 0.00 0.00 3.55
2295 2497 4.274459 GCCAGGATAATGAGAATGACACAC 59.726 45.833 0.00 0.00 0.00 3.82
2296 2498 4.164796 AGCCAGGATAATGAGAATGACACA 59.835 41.667 0.00 0.00 0.00 3.72
2297 2499 4.712476 AGCCAGGATAATGAGAATGACAC 58.288 43.478 0.00 0.00 0.00 3.67
2298 2500 6.692849 ATAGCCAGGATAATGAGAATGACA 57.307 37.500 0.00 0.00 0.00 3.58
2299 2501 7.992754 AAATAGCCAGGATAATGAGAATGAC 57.007 36.000 0.00 0.00 0.00 3.06
2300 2502 7.040201 GCAAAATAGCCAGGATAATGAGAATGA 60.040 37.037 0.00 0.00 0.00 2.57
2301 2503 7.088905 GCAAAATAGCCAGGATAATGAGAATG 58.911 38.462 0.00 0.00 0.00 2.67
2302 2504 6.779049 TGCAAAATAGCCAGGATAATGAGAAT 59.221 34.615 0.00 0.00 0.00 2.40
2303 2505 6.128486 TGCAAAATAGCCAGGATAATGAGAA 58.872 36.000 0.00 0.00 0.00 2.87
2304 2506 5.693961 TGCAAAATAGCCAGGATAATGAGA 58.306 37.500 0.00 0.00 0.00 3.27
2305 2507 6.040166 AGTTGCAAAATAGCCAGGATAATGAG 59.960 38.462 0.00 0.00 0.00 2.90
2306 2508 5.893255 AGTTGCAAAATAGCCAGGATAATGA 59.107 36.000 0.00 0.00 0.00 2.57
2307 2509 6.152932 AGTTGCAAAATAGCCAGGATAATG 57.847 37.500 0.00 0.00 0.00 1.90
2308 2510 5.009010 CGAGTTGCAAAATAGCCAGGATAAT 59.991 40.000 0.00 0.00 0.00 1.28
2309 2511 4.335315 CGAGTTGCAAAATAGCCAGGATAA 59.665 41.667 0.00 0.00 0.00 1.75
2310 2512 3.876914 CGAGTTGCAAAATAGCCAGGATA 59.123 43.478 0.00 0.00 0.00 2.59
2311 2513 2.684881 CGAGTTGCAAAATAGCCAGGAT 59.315 45.455 0.00 0.00 0.00 3.24
2312 2514 2.083774 CGAGTTGCAAAATAGCCAGGA 58.916 47.619 0.00 0.00 0.00 3.86
2313 2515 1.133025 CCGAGTTGCAAAATAGCCAGG 59.867 52.381 0.00 0.00 0.00 4.45
2314 2516 1.812571 ACCGAGTTGCAAAATAGCCAG 59.187 47.619 0.00 0.00 0.00 4.85
2315 2517 1.904287 ACCGAGTTGCAAAATAGCCA 58.096 45.000 0.00 0.00 0.00 4.75
2316 2518 3.007635 ACTACCGAGTTGCAAAATAGCC 58.992 45.455 0.00 0.00 28.61 3.93
2317 2519 3.435671 ACACTACCGAGTTGCAAAATAGC 59.564 43.478 0.00 0.00 31.73 2.97
2318 2520 4.929808 AGACACTACCGAGTTGCAAAATAG 59.070 41.667 0.00 1.60 31.73 1.73
2319 2521 4.890088 AGACACTACCGAGTTGCAAAATA 58.110 39.130 0.00 0.00 31.73 1.40
2320 2522 3.740115 AGACACTACCGAGTTGCAAAAT 58.260 40.909 0.00 0.00 31.73 1.82
2321 2523 3.128349 GAGACACTACCGAGTTGCAAAA 58.872 45.455 0.00 0.00 31.73 2.44
2322 2524 2.101750 TGAGACACTACCGAGTTGCAAA 59.898 45.455 0.00 0.00 31.73 3.68
2323 2525 1.684450 TGAGACACTACCGAGTTGCAA 59.316 47.619 0.00 0.00 31.73 4.08
2324 2526 1.324383 TGAGACACTACCGAGTTGCA 58.676 50.000 0.00 0.00 31.73 4.08
2325 2527 2.656560 ATGAGACACTACCGAGTTGC 57.343 50.000 0.00 0.00 31.73 4.17
2326 2528 4.082733 TGAGAATGAGACACTACCGAGTTG 60.083 45.833 0.00 0.00 31.73 3.16
2327 2529 4.079970 TGAGAATGAGACACTACCGAGTT 58.920 43.478 0.00 0.00 31.73 3.01
2328 2530 3.687125 TGAGAATGAGACACTACCGAGT 58.313 45.455 0.00 0.00 35.80 4.18
2329 2531 4.909696 ATGAGAATGAGACACTACCGAG 57.090 45.455 0.00 0.00 0.00 4.63
2330 2532 6.546034 TGATAATGAGAATGAGACACTACCGA 59.454 38.462 0.00 0.00 0.00 4.69
2331 2533 6.739112 TGATAATGAGAATGAGACACTACCG 58.261 40.000 0.00 0.00 0.00 4.02
2332 2534 7.601886 CCATGATAATGAGAATGAGACACTACC 59.398 40.741 0.00 0.00 0.00 3.18
2333 2535 7.117523 GCCATGATAATGAGAATGAGACACTAC 59.882 40.741 0.00 0.00 0.00 2.73
2334 2536 7.015974 AGCCATGATAATGAGAATGAGACACTA 59.984 37.037 0.00 0.00 0.00 2.74
2335 2537 5.996513 GCCATGATAATGAGAATGAGACACT 59.003 40.000 0.00 0.00 0.00 3.55
2336 2538 5.996513 AGCCATGATAATGAGAATGAGACAC 59.003 40.000 0.00 0.00 0.00 3.67
2337 2539 6.183810 AGCCATGATAATGAGAATGAGACA 57.816 37.500 0.00 0.00 0.00 3.41
2338 2540 8.789825 AATAGCCATGATAATGAGAATGAGAC 57.210 34.615 0.00 0.00 0.00 3.36
2339 2541 9.881649 GTAATAGCCATGATAATGAGAATGAGA 57.118 33.333 0.00 0.00 0.00 3.27
2340 2542 9.662947 TGTAATAGCCATGATAATGAGAATGAG 57.337 33.333 0.00 0.00 0.00 2.90
2343 2545 9.236006 GGTTGTAATAGCCATGATAATGAGAAT 57.764 33.333 0.00 0.00 0.00 2.40
2344 2546 7.665559 GGGTTGTAATAGCCATGATAATGAGAA 59.334 37.037 0.00 0.00 35.73 2.87
2345 2547 7.168219 GGGTTGTAATAGCCATGATAATGAGA 58.832 38.462 0.00 0.00 35.73 3.27
2346 2548 6.375455 GGGGTTGTAATAGCCATGATAATGAG 59.625 42.308 0.00 0.00 37.42 2.90
2347 2549 6.245408 GGGGTTGTAATAGCCATGATAATGA 58.755 40.000 0.00 0.00 37.42 2.57
2348 2550 5.418840 GGGGGTTGTAATAGCCATGATAATG 59.581 44.000 0.00 0.00 37.42 1.90
2349 2551 5.315914 AGGGGGTTGTAATAGCCATGATAAT 59.684 40.000 0.00 0.00 37.42 1.28
2350 2552 4.667858 AGGGGGTTGTAATAGCCATGATAA 59.332 41.667 0.00 0.00 37.42 1.75
2351 2553 4.042809 CAGGGGGTTGTAATAGCCATGATA 59.957 45.833 0.00 0.00 37.42 2.15
2352 2554 3.063650 AGGGGGTTGTAATAGCCATGAT 58.936 45.455 0.00 0.00 37.42 2.45
2353 2555 2.174639 CAGGGGGTTGTAATAGCCATGA 59.825 50.000 0.00 0.00 37.42 3.07
2354 2556 2.091885 ACAGGGGGTTGTAATAGCCATG 60.092 50.000 0.00 0.00 37.42 3.66
2355 2557 2.214201 ACAGGGGGTTGTAATAGCCAT 58.786 47.619 0.00 0.00 37.42 4.40
2356 2558 1.676248 ACAGGGGGTTGTAATAGCCA 58.324 50.000 0.00 0.00 37.42 4.75
2357 2559 2.775960 AGTACAGGGGGTTGTAATAGCC 59.224 50.000 0.00 0.00 35.47 3.93
2358 2560 4.498894 AAGTACAGGGGGTTGTAATAGC 57.501 45.455 0.00 0.00 35.47 2.97
2359 2561 7.509659 AGAGATAAGTACAGGGGGTTGTAATAG 59.490 40.741 0.00 0.00 35.47 1.73
2360 2562 7.289317 CAGAGATAAGTACAGGGGGTTGTAATA 59.711 40.741 0.00 0.00 35.47 0.98
2361 2563 6.099845 CAGAGATAAGTACAGGGGGTTGTAAT 59.900 42.308 0.00 0.00 35.47 1.89
2362 2564 5.424252 CAGAGATAAGTACAGGGGGTTGTAA 59.576 44.000 0.00 0.00 35.47 2.41
2363 2565 4.960469 CAGAGATAAGTACAGGGGGTTGTA 59.040 45.833 0.00 0.00 32.56 2.41
2364 2566 3.775316 CAGAGATAAGTACAGGGGGTTGT 59.225 47.826 0.00 0.00 35.09 3.32
2365 2567 4.030913 TCAGAGATAAGTACAGGGGGTTG 58.969 47.826 0.00 0.00 0.00 3.77
2366 2568 4.348020 TCAGAGATAAGTACAGGGGGTT 57.652 45.455 0.00 0.00 0.00 4.11
2367 2569 4.016479 TCTTCAGAGATAAGTACAGGGGGT 60.016 45.833 0.00 0.00 0.00 4.95
2368 2570 4.547671 TCTTCAGAGATAAGTACAGGGGG 58.452 47.826 0.00 0.00 0.00 5.40
2369 2571 5.069781 CCTTCTTCAGAGATAAGTACAGGGG 59.930 48.000 0.00 0.00 0.00 4.79
2370 2572 5.659079 ACCTTCTTCAGAGATAAGTACAGGG 59.341 44.000 0.00 0.00 0.00 4.45
2371 2573 6.153680 ACACCTTCTTCAGAGATAAGTACAGG 59.846 42.308 0.00 0.00 0.00 4.00
2372 2574 7.164230 ACACCTTCTTCAGAGATAAGTACAG 57.836 40.000 0.00 0.00 0.00 2.74
2373 2575 7.540474 AACACCTTCTTCAGAGATAAGTACA 57.460 36.000 0.00 0.00 0.00 2.90
2374 2576 8.741841 ACTAACACCTTCTTCAGAGATAAGTAC 58.258 37.037 0.00 0.00 0.00 2.73
2375 2577 8.740906 CACTAACACCTTCTTCAGAGATAAGTA 58.259 37.037 0.00 0.00 0.00 2.24
2376 2578 7.233757 ACACTAACACCTTCTTCAGAGATAAGT 59.766 37.037 0.00 0.00 0.00 2.24
2377 2579 7.607250 ACACTAACACCTTCTTCAGAGATAAG 58.393 38.462 0.00 0.00 0.00 1.73
2378 2580 7.540474 ACACTAACACCTTCTTCAGAGATAA 57.460 36.000 0.00 0.00 0.00 1.75
2379 2581 7.540474 AACACTAACACCTTCTTCAGAGATA 57.460 36.000 0.00 0.00 0.00 1.98
2380 2582 6.426646 AACACTAACACCTTCTTCAGAGAT 57.573 37.500 0.00 0.00 0.00 2.75
2381 2583 5.871396 AACACTAACACCTTCTTCAGAGA 57.129 39.130 0.00 0.00 0.00 3.10
2382 2584 7.382759 GTCTAAACACTAACACCTTCTTCAGAG 59.617 40.741 0.00 0.00 0.00 3.35
2383 2585 7.069578 AGTCTAAACACTAACACCTTCTTCAGA 59.930 37.037 0.00 0.00 0.00 3.27
2384 2586 7.210873 AGTCTAAACACTAACACCTTCTTCAG 58.789 38.462 0.00 0.00 0.00 3.02
2385 2587 7.120923 AGTCTAAACACTAACACCTTCTTCA 57.879 36.000 0.00 0.00 0.00 3.02
2386 2588 7.709613 TGAAGTCTAAACACTAACACCTTCTTC 59.290 37.037 0.00 0.00 0.00 2.87
2387 2589 7.562135 TGAAGTCTAAACACTAACACCTTCTT 58.438 34.615 0.00 0.00 0.00 2.52
2388 2590 7.069578 TCTGAAGTCTAAACACTAACACCTTCT 59.930 37.037 0.00 0.00 0.00 2.85
2389 2591 7.208080 TCTGAAGTCTAAACACTAACACCTTC 58.792 38.462 0.00 0.00 0.00 3.46
2390 2592 7.120923 TCTGAAGTCTAAACACTAACACCTT 57.879 36.000 0.00 0.00 0.00 3.50
2391 2593 6.324254 ACTCTGAAGTCTAAACACTAACACCT 59.676 38.462 0.00 0.00 0.00 4.00
2392 2594 6.514063 ACTCTGAAGTCTAAACACTAACACC 58.486 40.000 0.00 0.00 0.00 4.16
2407 2609 3.458189 CAAACTGAACCGACTCTGAAGT 58.542 45.455 0.00 0.00 38.88 3.01
2408 2610 2.802816 CCAAACTGAACCGACTCTGAAG 59.197 50.000 0.00 0.00 0.00 3.02
2409 2611 2.484770 CCCAAACTGAACCGACTCTGAA 60.485 50.000 0.00 0.00 0.00 3.02
2410 2612 1.070134 CCCAAACTGAACCGACTCTGA 59.930 52.381 0.00 0.00 0.00 3.27
2411 2613 1.512926 CCCAAACTGAACCGACTCTG 58.487 55.000 0.00 0.00 0.00 3.35
2412 2614 0.250338 GCCCAAACTGAACCGACTCT 60.250 55.000 0.00 0.00 0.00 3.24
2413 2615 0.250338 AGCCCAAACTGAACCGACTC 60.250 55.000 0.00 0.00 0.00 3.36
2414 2616 0.182775 AAGCCCAAACTGAACCGACT 59.817 50.000 0.00 0.00 0.00 4.18
2415 2617 1.029681 AAAGCCCAAACTGAACCGAC 58.970 50.000 0.00 0.00 0.00 4.79
2416 2618 1.028905 CAAAGCCCAAACTGAACCGA 58.971 50.000 0.00 0.00 0.00 4.69
2417 2619 0.597377 GCAAAGCCCAAACTGAACCG 60.597 55.000 0.00 0.00 0.00 4.44
2418 2620 0.463620 TGCAAAGCCCAAACTGAACC 59.536 50.000 0.00 0.00 0.00 3.62
2419 2621 1.408702 TCTGCAAAGCCCAAACTGAAC 59.591 47.619 0.00 0.00 0.00 3.18
2420 2622 1.774110 TCTGCAAAGCCCAAACTGAA 58.226 45.000 0.00 0.00 0.00 3.02
2421 2623 1.888512 GATCTGCAAAGCCCAAACTGA 59.111 47.619 0.00 0.00 0.00 3.41
2422 2624 1.614903 TGATCTGCAAAGCCCAAACTG 59.385 47.619 0.00 0.00 0.00 3.16
2423 2625 1.999648 TGATCTGCAAAGCCCAAACT 58.000 45.000 0.00 0.00 0.00 2.66
2424 2626 2.231964 TGATGATCTGCAAAGCCCAAAC 59.768 45.455 0.00 0.00 0.00 2.93
2425 2627 2.527497 TGATGATCTGCAAAGCCCAAA 58.473 42.857 0.00 0.00 0.00 3.28
2426 2628 2.219080 TGATGATCTGCAAAGCCCAA 57.781 45.000 0.00 0.00 0.00 4.12
2427 2629 2.097036 CTTGATGATCTGCAAAGCCCA 58.903 47.619 0.00 0.00 0.00 5.36
2428 2630 2.372264 TCTTGATGATCTGCAAAGCCC 58.628 47.619 0.00 0.00 0.00 5.19
2429 2631 4.338682 AGATTCTTGATGATCTGCAAAGCC 59.661 41.667 0.00 0.00 0.00 4.35
2430 2632 5.163642 ACAGATTCTTGATGATCTGCAAAGC 60.164 40.000 11.98 0.00 43.02 3.51
2431 2633 6.438259 ACAGATTCTTGATGATCTGCAAAG 57.562 37.500 11.98 0.00 43.02 2.77
2432 2634 6.829229 AACAGATTCTTGATGATCTGCAAA 57.171 33.333 11.98 0.00 43.02 3.68
2433 2635 6.657966 AGAAACAGATTCTTGATGATCTGCAA 59.342 34.615 11.98 0.00 46.39 4.08
2434 2636 6.178324 AGAAACAGATTCTTGATGATCTGCA 58.822 36.000 11.98 0.00 46.39 4.41
2435 2637 6.680874 AGAAACAGATTCTTGATGATCTGC 57.319 37.500 11.98 0.00 46.39 4.26
2449 2651 9.178758 GGATATTCACTACCAAAAGAAACAGAT 57.821 33.333 0.00 0.00 0.00 2.90
2450 2652 7.333423 CGGATATTCACTACCAAAAGAAACAGA 59.667 37.037 0.00 0.00 0.00 3.41
2451 2653 7.333423 TCGGATATTCACTACCAAAAGAAACAG 59.667 37.037 0.00 0.00 0.00 3.16
2452 2654 7.162761 TCGGATATTCACTACCAAAAGAAACA 58.837 34.615 0.00 0.00 0.00 2.83
2453 2655 7.605410 TCGGATATTCACTACCAAAAGAAAC 57.395 36.000 0.00 0.00 0.00 2.78
2454 2656 8.801882 ATTCGGATATTCACTACCAAAAGAAA 57.198 30.769 0.00 0.00 0.00 2.52
2455 2657 8.044309 TGATTCGGATATTCACTACCAAAAGAA 58.956 33.333 0.00 0.00 0.00 2.52
2456 2658 7.494625 GTGATTCGGATATTCACTACCAAAAGA 59.505 37.037 8.26 0.00 36.16 2.52
2457 2659 7.254795 GGTGATTCGGATATTCACTACCAAAAG 60.255 40.741 12.84 0.00 38.16 2.27
2458 2660 6.540914 GGTGATTCGGATATTCACTACCAAAA 59.459 38.462 12.84 0.00 38.16 2.44
2459 2661 6.053005 GGTGATTCGGATATTCACTACCAAA 58.947 40.000 12.84 0.00 38.16 3.28
2460 2662 5.129650 TGGTGATTCGGATATTCACTACCAA 59.870 40.000 12.84 0.00 38.16 3.67
2461 2663 4.651962 TGGTGATTCGGATATTCACTACCA 59.348 41.667 12.84 0.00 38.16 3.25
2462 2664 5.209818 TGGTGATTCGGATATTCACTACC 57.790 43.478 12.84 0.00 38.16 3.18
2463 2665 7.730364 AAATGGTGATTCGGATATTCACTAC 57.270 36.000 12.84 2.87 38.16 2.73
2464 2666 8.647796 AGTAAATGGTGATTCGGATATTCACTA 58.352 33.333 12.84 9.23 38.16 2.74
2465 2667 7.509546 AGTAAATGGTGATTCGGATATTCACT 58.490 34.615 12.84 0.00 38.16 3.41
2466 2668 7.730364 AGTAAATGGTGATTCGGATATTCAC 57.270 36.000 7.38 7.38 37.62 3.18
2467 2669 9.268268 GTTAGTAAATGGTGATTCGGATATTCA 57.732 33.333 0.00 0.00 0.00 2.57
2468 2670 9.268268 TGTTAGTAAATGGTGATTCGGATATTC 57.732 33.333 0.00 0.00 0.00 1.75
2469 2671 9.052759 GTGTTAGTAAATGGTGATTCGGATATT 57.947 33.333 0.00 0.00 0.00 1.28
2470 2672 8.429641 AGTGTTAGTAAATGGTGATTCGGATAT 58.570 33.333 0.00 0.00 0.00 1.63
2471 2673 7.788026 AGTGTTAGTAAATGGTGATTCGGATA 58.212 34.615 0.00 0.00 0.00 2.59
2472 2674 6.650120 AGTGTTAGTAAATGGTGATTCGGAT 58.350 36.000 0.00 0.00 0.00 4.18
2473 2675 6.045072 AGTGTTAGTAAATGGTGATTCGGA 57.955 37.500 0.00 0.00 0.00 4.55
2474 2676 7.039882 ACTAGTGTTAGTAAATGGTGATTCGG 58.960 38.462 0.00 0.00 38.35 4.30
2475 2677 7.758076 TGACTAGTGTTAGTAAATGGTGATTCG 59.242 37.037 0.00 0.00 40.21 3.34
2476 2678 8.870879 GTGACTAGTGTTAGTAAATGGTGATTC 58.129 37.037 0.00 0.00 40.21 2.52
2477 2679 8.372459 TGTGACTAGTGTTAGTAAATGGTGATT 58.628 33.333 0.00 0.00 40.21 2.57
2478 2680 7.903145 TGTGACTAGTGTTAGTAAATGGTGAT 58.097 34.615 0.00 0.00 40.21 3.06
2479 2681 7.292713 TGTGACTAGTGTTAGTAAATGGTGA 57.707 36.000 0.00 0.00 40.21 4.02
2480 2682 7.817478 TGATGTGACTAGTGTTAGTAAATGGTG 59.183 37.037 0.00 0.00 40.21 4.17
2481 2683 7.903145 TGATGTGACTAGTGTTAGTAAATGGT 58.097 34.615 0.00 0.00 40.21 3.55
2482 2684 7.492669 CCTGATGTGACTAGTGTTAGTAAATGG 59.507 40.741 0.00 0.00 40.21 3.16
2483 2685 7.010552 GCCTGATGTGACTAGTGTTAGTAAATG 59.989 40.741 0.00 0.00 40.21 2.32
2484 2686 7.042335 GCCTGATGTGACTAGTGTTAGTAAAT 58.958 38.462 0.00 0.00 40.21 1.40
2485 2687 6.210784 AGCCTGATGTGACTAGTGTTAGTAAA 59.789 38.462 0.00 0.00 40.21 2.01
2486 2688 5.715279 AGCCTGATGTGACTAGTGTTAGTAA 59.285 40.000 0.00 0.00 40.21 2.24
2487 2689 5.262009 AGCCTGATGTGACTAGTGTTAGTA 58.738 41.667 0.00 0.00 40.21 1.82
2488 2690 4.090090 AGCCTGATGTGACTAGTGTTAGT 58.910 43.478 0.00 0.00 42.79 2.24
2489 2691 4.158579 TGAGCCTGATGTGACTAGTGTTAG 59.841 45.833 0.00 0.00 0.00 2.34
2490 2692 4.086457 TGAGCCTGATGTGACTAGTGTTA 58.914 43.478 0.00 0.00 0.00 2.41
2491 2693 2.899900 TGAGCCTGATGTGACTAGTGTT 59.100 45.455 0.00 0.00 0.00 3.32
2492 2694 2.529632 TGAGCCTGATGTGACTAGTGT 58.470 47.619 0.00 0.00 0.00 3.55
2493 2695 3.815856 ATGAGCCTGATGTGACTAGTG 57.184 47.619 0.00 0.00 0.00 2.74
2494 2696 5.939764 TTAATGAGCCTGATGTGACTAGT 57.060 39.130 0.00 0.00 0.00 2.57
2495 2697 7.798596 AAATTAATGAGCCTGATGTGACTAG 57.201 36.000 0.00 0.00 0.00 2.57
2496 2698 7.611467 ACAAAATTAATGAGCCTGATGTGACTA 59.389 33.333 0.00 0.00 0.00 2.59
2497 2699 6.435277 ACAAAATTAATGAGCCTGATGTGACT 59.565 34.615 0.00 0.00 0.00 3.41
2498 2700 6.624423 ACAAAATTAATGAGCCTGATGTGAC 58.376 36.000 0.00 0.00 0.00 3.67
2499 2701 6.839124 ACAAAATTAATGAGCCTGATGTGA 57.161 33.333 0.00 0.00 0.00 3.58
2500 2702 7.765307 AGTACAAAATTAATGAGCCTGATGTG 58.235 34.615 0.00 0.00 0.00 3.21
2501 2703 7.944729 AGTACAAAATTAATGAGCCTGATGT 57.055 32.000 0.00 0.00 0.00 3.06
2531 2733 9.197694 GCAGTCTAAGATTTATGGTATACAGTG 57.802 37.037 5.01 0.00 0.00 3.66
2532 2734 8.924303 TGCAGTCTAAGATTTATGGTATACAGT 58.076 33.333 5.01 0.00 0.00 3.55
2533 2735 9.764363 TTGCAGTCTAAGATTTATGGTATACAG 57.236 33.333 5.01 0.00 0.00 2.74
2538 2740 9.905713 AAGAATTGCAGTCTAAGATTTATGGTA 57.094 29.630 2.68 0.00 0.00 3.25
2539 2741 8.814038 AAGAATTGCAGTCTAAGATTTATGGT 57.186 30.769 2.68 0.00 0.00 3.55
2540 2742 8.896744 TGAAGAATTGCAGTCTAAGATTTATGG 58.103 33.333 2.68 0.00 0.00 2.74
2541 2743 9.932699 CTGAAGAATTGCAGTCTAAGATTTATG 57.067 33.333 2.68 0.00 0.00 1.90
2542 2744 9.678260 ACTGAAGAATTGCAGTCTAAGATTTAT 57.322 29.630 14.25 0.00 41.21 1.40
2543 2745 9.507329 AACTGAAGAATTGCAGTCTAAGATTTA 57.493 29.630 14.25 0.00 44.06 1.40
2544 2746 7.992754 ACTGAAGAATTGCAGTCTAAGATTT 57.007 32.000 14.25 0.00 41.21 2.17
2545 2747 7.814642 CAACTGAAGAATTGCAGTCTAAGATT 58.185 34.615 14.25 0.00 44.06 2.40
2546 2748 7.375106 CAACTGAAGAATTGCAGTCTAAGAT 57.625 36.000 14.25 4.98 44.06 2.40
2547 2749 6.791887 CAACTGAAGAATTGCAGTCTAAGA 57.208 37.500 14.25 0.00 44.06 2.10
2558 2760 4.153475 GCAATGCAATGCAACTGAAGAATT 59.847 37.500 21.74 2.47 43.62 2.17
2570 2772 0.179468 AAGGGGATGCAATGCAATGC 59.821 50.000 19.99 19.99 43.62 3.56
2571 2773 1.208535 ACAAGGGGATGCAATGCAATG 59.791 47.619 13.45 7.40 43.62 2.82
2572 2774 1.575419 ACAAGGGGATGCAATGCAAT 58.425 45.000 13.45 0.33 43.62 3.56
2624 6342 3.132289 TGAACTGAACCGACTCTGAACTT 59.868 43.478 0.00 0.00 0.00 2.66
2664 6391 4.456911 TCATCAGCACAAGAAACAGATTCC 59.543 41.667 0.00 0.00 38.94 3.01
2669 6396 6.921857 AGAAAATTCATCAGCACAAGAAACAG 59.078 34.615 0.00 0.00 0.00 3.16
2702 6429 7.178274 TGGTGATGCAGATTTAATTACTGGTTT 59.822 33.333 0.00 0.00 33.00 3.27
2705 6432 6.698008 TGGTGATGCAGATTTAATTACTGG 57.302 37.500 0.00 0.00 33.00 4.00
2715 6442 6.886459 AGTGTTAGTAAATGGTGATGCAGATT 59.114 34.615 0.00 0.00 0.00 2.40
2746 6520 9.546909 CAACTTGTAAAATACTAGCAGTGATTG 57.453 33.333 0.00 0.00 35.40 2.67
2778 6552 5.183969 CAAACATGACAGTGAGGATGAGAT 58.816 41.667 0.00 0.00 0.00 2.75
2785 6559 4.637483 AACAACAAACATGACAGTGAGG 57.363 40.909 0.00 0.00 0.00 3.86
2793 6567 4.161189 ACCATGGACAAACAACAAACATGA 59.839 37.500 21.47 0.00 37.10 3.07
2963 6737 6.183360 GGAAATTACTAGTTGGCCATCAGTTC 60.183 42.308 16.12 9.11 0.00 3.01
3091 6865 4.309933 ACATCATCGGCACTATGTATGTG 58.690 43.478 0.00 0.00 34.15 3.21
3105 6881 2.079158 AGTGGCAGACAAACATCATCG 58.921 47.619 0.00 0.00 0.00 3.84
3184 6960 5.301551 ACAGCACAAGGATTCACACATTTAA 59.698 36.000 0.00 0.00 0.00 1.52
3186 6962 3.638160 ACAGCACAAGGATTCACACATTT 59.362 39.130 0.00 0.00 0.00 2.32
3197 6974 2.407268 CTGCACAACAGCACAAGGA 58.593 52.632 0.00 0.00 40.19 3.36
3207 6984 0.675633 AGGCCATTGAACTGCACAAC 59.324 50.000 5.01 0.00 0.00 3.32
3332 7111 5.680619 TGTCACAAGAAACAAGGATGTAGT 58.319 37.500 0.00 0.00 39.40 2.73
3337 7116 4.576463 GTGTCTGTCACAAGAAACAAGGAT 59.424 41.667 0.13 0.00 45.51 3.24
3381 7165 2.884012 CCTGGTGTTCACAAATGCAGTA 59.116 45.455 5.32 0.00 0.00 2.74
3398 7186 3.350833 CTTCATCTTCCCAAACTCCTGG 58.649 50.000 0.00 0.00 36.10 4.45
3542 7330 2.938956 AGGTGTTGTCCTTCTTCAGG 57.061 50.000 0.00 0.00 45.64 3.86
3675 7463 9.131791 ACCACTCAAACTATACTGAAACAAAAT 57.868 29.630 0.00 0.00 0.00 1.82
3676 7464 8.514330 ACCACTCAAACTATACTGAAACAAAA 57.486 30.769 0.00 0.00 0.00 2.44
3677 7465 8.514330 AACCACTCAAACTATACTGAAACAAA 57.486 30.769 0.00 0.00 0.00 2.83
3678 7466 8.514330 AAACCACTCAAACTATACTGAAACAA 57.486 30.769 0.00 0.00 0.00 2.83
3679 7467 9.616156 TTAAACCACTCAAACTATACTGAAACA 57.384 29.630 0.00 0.00 0.00 2.83
3682 7470 8.726988 GCATTAAACCACTCAAACTATACTGAA 58.273 33.333 0.00 0.00 0.00 3.02
3683 7471 7.880713 TGCATTAAACCACTCAAACTATACTGA 59.119 33.333 0.00 0.00 0.00 3.41
3684 7472 8.039603 TGCATTAAACCACTCAAACTATACTG 57.960 34.615 0.00 0.00 0.00 2.74
3685 7473 8.630054 TTGCATTAAACCACTCAAACTATACT 57.370 30.769 0.00 0.00 0.00 2.12
3686 7474 8.726988 TCTTGCATTAAACCACTCAAACTATAC 58.273 33.333 0.00 0.00 0.00 1.47
3687 7475 8.856153 TCTTGCATTAAACCACTCAAACTATA 57.144 30.769 0.00 0.00 0.00 1.31
3688 7476 7.759489 TCTTGCATTAAACCACTCAAACTAT 57.241 32.000 0.00 0.00 0.00 2.12
3689 7477 7.575414 TTCTTGCATTAAACCACTCAAACTA 57.425 32.000 0.00 0.00 0.00 2.24
3690 7478 6.463995 TTCTTGCATTAAACCACTCAAACT 57.536 33.333 0.00 0.00 0.00 2.66
3691 7479 7.437862 TGAATTCTTGCATTAAACCACTCAAAC 59.562 33.333 7.05 0.00 0.00 2.93
3692 7480 7.495901 TGAATTCTTGCATTAAACCACTCAAA 58.504 30.769 7.05 0.00 0.00 2.69
3693 7481 7.048629 TGAATTCTTGCATTAAACCACTCAA 57.951 32.000 7.05 0.00 0.00 3.02
3694 7482 6.647334 TGAATTCTTGCATTAAACCACTCA 57.353 33.333 7.05 0.00 0.00 3.41
3695 7483 6.088085 CGTTGAATTCTTGCATTAAACCACTC 59.912 38.462 7.05 0.00 26.99 3.51
3696 7484 5.920273 CGTTGAATTCTTGCATTAAACCACT 59.080 36.000 7.05 0.00 26.99 4.00
3697 7485 5.388371 GCGTTGAATTCTTGCATTAAACCAC 60.388 40.000 7.05 0.00 26.99 4.16
3698 7486 4.683781 GCGTTGAATTCTTGCATTAAACCA 59.316 37.500 7.05 0.00 26.99 3.67
3699 7487 4.683781 TGCGTTGAATTCTTGCATTAAACC 59.316 37.500 13.37 1.36 26.99 3.27
3700 7488 5.820926 TGCGTTGAATTCTTGCATTAAAC 57.179 34.783 13.37 4.04 0.00 2.01
3701 7489 5.982516 ACTTGCGTTGAATTCTTGCATTAAA 59.017 32.000 16.62 5.38 35.20 1.52
3704 7492 3.737266 CACTTGCGTTGAATTCTTGCATT 59.263 39.130 16.62 7.77 35.20 3.56
3711 7499 1.408422 GCACCACTTGCGTTGAATTC 58.592 50.000 0.00 0.00 42.79 2.17
3721 7509 1.462283 CACGAGATTCAGCACCACTTG 59.538 52.381 0.00 0.00 0.00 3.16
3722 7510 1.070758 ACACGAGATTCAGCACCACTT 59.929 47.619 0.00 0.00 0.00 3.16
3724 7521 1.071605 GACACGAGATTCAGCACCAC 58.928 55.000 0.00 0.00 0.00 4.16
3736 7543 0.708370 CATCACCGAAACGACACGAG 59.292 55.000 0.00 0.00 0.00 4.18
3738 7545 1.129809 GCATCACCGAAACGACACG 59.870 57.895 0.00 0.00 0.00 4.49
3740 7547 1.403647 CCTAGCATCACCGAAACGACA 60.404 52.381 0.00 0.00 0.00 4.35
3748 7555 1.338337 AGTCGATTCCTAGCATCACCG 59.662 52.381 0.00 0.00 0.00 4.94
3750 7557 2.362397 TCCAGTCGATTCCTAGCATCAC 59.638 50.000 0.00 0.49 0.00 3.06
3751 7558 2.666317 TCCAGTCGATTCCTAGCATCA 58.334 47.619 0.00 0.00 0.00 3.07
3761 7568 6.517529 GCTTCCTGTAATCTATCCAGTCGATT 60.518 42.308 0.00 0.00 31.92 3.34
3776 7583 5.036117 ACTTCTTCAGTTGCTTCCTGTAA 57.964 39.130 0.00 0.00 27.32 2.41
3800 7607 0.366871 CTTCGACGTTCCATTGCTCG 59.633 55.000 0.00 0.00 0.00 5.03
3826 7633 3.499918 CGAGAATGAAAGCCACAAGAGTT 59.500 43.478 0.00 0.00 0.00 3.01
3828 7635 3.124297 GTCGAGAATGAAAGCCACAAGAG 59.876 47.826 0.00 0.00 0.00 2.85
3836 7643 4.999751 AGAAAGTGTCGAGAATGAAAGC 57.000 40.909 0.00 0.00 0.00 3.51
3847 7654 4.397382 CACATATGCACAAGAAAGTGTCG 58.603 43.478 1.58 0.00 41.52 4.35
3871 7678 3.186047 ACGAATAGGCGTGCGTGC 61.186 61.111 0.00 0.00 43.79 5.34
3924 7739 1.045407 ATCGGAAGCAATACGCCCTA 58.955 50.000 0.00 0.00 44.04 3.53
3929 7744 5.461526 TGAGAGAATATCGGAAGCAATACG 58.538 41.667 0.00 0.00 36.39 3.06
3935 7750 4.450419 CCAACATGAGAGAATATCGGAAGC 59.550 45.833 0.00 0.00 0.00 3.86
3936 7751 5.605534 ACCAACATGAGAGAATATCGGAAG 58.394 41.667 0.00 0.00 0.00 3.46
3980 7796 7.503902 TGAGCAGACATGAGATAGTAGTGTATT 59.496 37.037 0.00 0.00 0.00 1.89
3994 7810 4.151121 TGGGAAATTTTGAGCAGACATGA 58.849 39.130 0.00 0.00 0.00 3.07
3996 7812 4.559300 CGTTGGGAAATTTTGAGCAGACAT 60.559 41.667 0.00 0.00 0.00 3.06
3998 7814 3.308530 CGTTGGGAAATTTTGAGCAGAC 58.691 45.455 0.00 0.00 0.00 3.51
4000 7816 2.676076 CCGTTGGGAAATTTTGAGCAG 58.324 47.619 0.00 0.00 34.06 4.24
4001 7817 1.270041 GCCGTTGGGAAATTTTGAGCA 60.270 47.619 0.00 0.00 34.06 4.26
4002 7818 1.270041 TGCCGTTGGGAAATTTTGAGC 60.270 47.619 0.00 0.00 34.06 4.26
4003 7819 2.810439 TGCCGTTGGGAAATTTTGAG 57.190 45.000 0.00 0.00 34.06 3.02
4004 7820 3.760580 AATGCCGTTGGGAAATTTTGA 57.239 38.095 0.00 0.00 34.06 2.69
4005 7821 3.812053 TGAAATGCCGTTGGGAAATTTTG 59.188 39.130 0.00 0.00 33.64 2.44
4007 7823 3.070878 AGTGAAATGCCGTTGGGAAATTT 59.929 39.130 0.00 0.00 35.20 1.82
4008 7824 2.632512 AGTGAAATGCCGTTGGGAAATT 59.367 40.909 0.00 0.00 34.06 1.82
4009 7825 2.231235 GAGTGAAATGCCGTTGGGAAAT 59.769 45.455 0.00 0.00 34.06 2.17
4013 7829 0.523072 CTGAGTGAAATGCCGTTGGG 59.477 55.000 0.00 0.00 0.00 4.12
4021 7837 5.690409 GCAATGGCATTATCTGAGTGAAATG 59.310 40.000 13.23 0.00 40.72 2.32
4032 7848 3.738830 ACACATGGCAATGGCATTATC 57.261 42.857 20.02 8.55 46.61 1.75
4051 7867 9.626045 AATTAACTGCAAATTTGTAAGAGCTAC 57.374 29.630 22.21 5.26 0.00 3.58
4081 7899 0.107410 TGGGGACATACGTGGAATGC 60.107 55.000 0.00 0.00 33.40 3.56
4086 7904 0.037139 TTTCGTGGGGACATACGTGG 60.037 55.000 0.00 0.00 46.14 4.94
4255 8080 2.331132 GCTTCAGGGCACTGTCAGC 61.331 63.158 21.83 21.83 45.14 4.26
4296 8121 4.641396 TCGTTTCCATGTTCTTGTGAGAT 58.359 39.130 0.00 0.00 0.00 2.75
4317 8148 5.949735 TCTCCAACACACTTTTCAGTTTTC 58.050 37.500 0.00 0.00 0.00 2.29
4330 8162 4.261572 GCAGCAAATAAGTTCTCCAACACA 60.262 41.667 0.00 0.00 34.60 3.72
4373 8210 2.189499 GCCCTCCATCCGTTGCATC 61.189 63.158 0.00 0.00 0.00 3.91
4374 8211 2.124151 GCCCTCCATCCGTTGCAT 60.124 61.111 0.00 0.00 0.00 3.96
4376 8213 2.514824 GAGCCCTCCATCCGTTGC 60.515 66.667 0.00 0.00 0.00 4.17
4403 8240 2.435805 ACTTTCAAGACTCACAGGCTGA 59.564 45.455 23.66 0.00 30.77 4.26
4405 8242 2.435805 TGACTTTCAAGACTCACAGGCT 59.564 45.455 0.00 0.00 32.54 4.58
4406 8243 2.805099 CTGACTTTCAAGACTCACAGGC 59.195 50.000 0.00 0.00 0.00 4.85
4407 8244 3.397482 CCTGACTTTCAAGACTCACAGG 58.603 50.000 0.00 0.00 37.81 4.00
4408 8245 3.397482 CCCTGACTTTCAAGACTCACAG 58.603 50.000 0.00 0.00 0.00 3.66
4409 8246 2.485479 GCCCTGACTTTCAAGACTCACA 60.485 50.000 0.00 0.00 0.00 3.58
4410 8247 2.147150 GCCCTGACTTTCAAGACTCAC 58.853 52.381 0.00 0.00 0.00 3.51
4413 8250 1.544314 GCAGCCCTGACTTTCAAGACT 60.544 52.381 0.00 0.00 0.00 3.24
4414 8251 0.877743 GCAGCCCTGACTTTCAAGAC 59.122 55.000 0.00 0.00 0.00 3.01
4415 8252 0.473755 TGCAGCCCTGACTTTCAAGA 59.526 50.000 0.00 0.00 0.00 3.02
4416 8253 1.471684 GATGCAGCCCTGACTTTCAAG 59.528 52.381 0.00 0.00 0.00 3.02
4417 8254 1.074405 AGATGCAGCCCTGACTTTCAA 59.926 47.619 0.00 0.00 0.00 2.69
4418 8255 0.694771 AGATGCAGCCCTGACTTTCA 59.305 50.000 0.00 0.00 0.00 2.69
4419 8256 1.093159 CAGATGCAGCCCTGACTTTC 58.907 55.000 0.00 0.00 32.37 2.62
4420 8257 0.964358 GCAGATGCAGCCCTGACTTT 60.964 55.000 14.21 0.00 41.59 2.66
4421 8258 1.378250 GCAGATGCAGCCCTGACTT 60.378 57.895 14.21 0.00 41.59 3.01
4445 8288 2.291024 ACAACCACCACAACAACAGGTA 60.291 45.455 0.00 0.00 33.49 3.08
4458 8301 0.528249 CAGCAGCAACAACAACCACC 60.528 55.000 0.00 0.00 0.00 4.61
4461 8304 4.017092 GCAGCAGCAACAACAACC 57.983 55.556 0.00 0.00 41.58 3.77
4479 8322 1.793134 GAGCAGCAACAGCAGCAAGT 61.793 55.000 7.56 0.00 42.49 3.16
4663 8516 2.759355 TCCTTATCGATGGTCCAACCT 58.241 47.619 8.54 0.00 39.58 3.50
4664 8517 3.403038 CATCCTTATCGATGGTCCAACC 58.597 50.000 8.54 0.00 36.74 3.77
4677 8530 3.582208 GAGAGATCCTGCACCATCCTTAT 59.418 47.826 0.00 0.00 0.00 1.73
4733 8590 1.134401 CACCATTCCACTAGCACCGAT 60.134 52.381 0.00 0.00 0.00 4.18
4754 8611 0.989212 AAGGTACCACCACCACACCA 60.989 55.000 15.94 0.00 41.95 4.17
4760 8617 1.595357 CTCGGAAGGTACCACCACC 59.405 63.158 22.16 14.66 41.95 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.