Multiple sequence alignment - TraesCS7D01G009500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G009500 chr7D 100.000 2642 0 0 1 2642 4627883 4630524 0.000000e+00 4879.0
1 TraesCS7D01G009500 chr7D 92.985 1568 70 13 693 2230 11618454 11616897 0.000000e+00 2250.0
2 TraesCS7D01G009500 chr7D 86.632 763 77 16 1186 1939 11454563 11453817 0.000000e+00 821.0
3 TraesCS7D01G009500 chr7D 85.619 452 48 3 693 1128 11455027 11454577 2.400000e-125 459.0
4 TraesCS7D01G009500 chr7D 87.032 401 44 7 285 678 23194936 23194537 1.870000e-121 446.0
5 TraesCS7D01G009500 chr7D 91.228 285 23 1 1 285 4584852 4585134 1.150000e-103 387.0
6 TraesCS7D01G009500 chr7D 90.196 153 14 1 1932 2083 11437346 11437194 5.770000e-47 198.0
7 TraesCS7D01G009500 chr7A 89.286 1932 152 33 708 2608 10988706 10986799 0.000000e+00 2370.0
8 TraesCS7D01G009500 chr7A 75.518 1013 185 41 817 1790 11053652 11052664 3.120000e-119 438.0
9 TraesCS7D01G009500 chr7A 88.776 294 23 5 1 285 4457508 4457800 4.180000e-93 351.0
10 TraesCS7D01G009500 chr7A 72.674 849 185 34 818 1648 14929913 14930732 3.400000e-59 239.0
11 TraesCS7D01G009500 chr7A 81.768 181 20 9 115 285 4468605 4468782 3.550000e-29 139.0
12 TraesCS7D01G009500 chr4A 92.473 1581 86 10 693 2246 726316009 726317583 0.000000e+00 2230.0
13 TraesCS7D01G009500 chr4A 86.891 1068 113 8 693 1736 726418848 726419912 0.000000e+00 1171.0
14 TraesCS7D01G009500 chr4A 91.119 867 56 12 1751 2605 726420576 726421433 0.000000e+00 1155.0
15 TraesCS7D01G009500 chr4A 84.223 843 106 11 817 1657 726377321 726378138 0.000000e+00 795.0
16 TraesCS7D01G009500 chr4A 88.424 406 35 6 2248 2642 726317558 726317962 1.840000e-131 479.0
17 TraesCS7D01G009500 chr4A 75.832 1022 202 32 827 1829 726308351 726309346 6.620000e-131 477.0
18 TraesCS7D01G009500 chr4A 85.638 376 43 7 1699 2073 726378134 726378499 4.130000e-103 385.0
19 TraesCS7D01G009500 chr4A 90.476 294 16 9 1 285 739040976 739040686 6.900000e-101 377.0
20 TraesCS7D01G009500 chr4A 92.432 185 9 5 2064 2248 726398757 726398936 2.610000e-65 259.0
21 TraesCS7D01G009500 chr4A 97.468 79 2 0 2564 2642 739040326 739040248 4.590000e-28 135.0
22 TraesCS7D01G009500 chr4A 94.828 58 1 1 2306 2363 726398947 726399002 3.620000e-14 89.8
23 TraesCS7D01G009500 chr2D 89.000 400 38 4 285 678 27616138 27616537 8.500000e-135 490.0
24 TraesCS7D01G009500 chr5D 88.030 401 40 6 285 678 391379666 391380065 3.980000e-128 468.0
25 TraesCS7D01G009500 chr5A 87.980 391 41 4 294 678 262232880 262233270 8.620000e-125 457.0
26 TraesCS7D01G009500 chr5B 86.750 400 47 4 285 678 604490310 604489911 8.680000e-120 440.0
27 TraesCS7D01G009500 chr5B 87.692 325 34 5 316 636 471407878 471408200 8.930000e-100 374.0
28 TraesCS7D01G009500 chr4B 85.417 384 47 5 285 659 666621364 666620981 8.870000e-105 390.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G009500 chr7D 4627883 4630524 2641 False 4879.0 4879 100.0000 1 2642 1 chr7D.!!$F2 2641
1 TraesCS7D01G009500 chr7D 11616897 11618454 1557 True 2250.0 2250 92.9850 693 2230 1 chr7D.!!$R2 1537
2 TraesCS7D01G009500 chr7D 11453817 11455027 1210 True 640.0 821 86.1255 693 1939 2 chr7D.!!$R4 1246
3 TraesCS7D01G009500 chr7A 10986799 10988706 1907 True 2370.0 2370 89.2860 708 2608 1 chr7A.!!$R1 1900
4 TraesCS7D01G009500 chr7A 11052664 11053652 988 True 438.0 438 75.5180 817 1790 1 chr7A.!!$R2 973
5 TraesCS7D01G009500 chr7A 14929913 14930732 819 False 239.0 239 72.6740 818 1648 1 chr7A.!!$F3 830
6 TraesCS7D01G009500 chr4A 726316009 726317962 1953 False 1354.5 2230 90.4485 693 2642 2 chr4A.!!$F2 1949
7 TraesCS7D01G009500 chr4A 726418848 726421433 2585 False 1163.0 1171 89.0050 693 2605 2 chr4A.!!$F5 1912
8 TraesCS7D01G009500 chr4A 726377321 726378499 1178 False 590.0 795 84.9305 817 2073 2 chr4A.!!$F3 1256
9 TraesCS7D01G009500 chr4A 726308351 726309346 995 False 477.0 477 75.8320 827 1829 1 chr4A.!!$F1 1002
10 TraesCS7D01G009500 chr4A 739040248 739040976 728 True 256.0 377 93.9720 1 2642 2 chr4A.!!$R1 2641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
605 611 0.030235 GTTGTCCGGTCCAAAGTTGC 59.97 55.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2296 3060 1.066502 TCGGGAATCAGCGATTTCACA 60.067 47.619 10.42 0.0 31.89 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 3.340814 AGTTGCTAGGGTGAATCACAG 57.659 47.619 15.86 5.33 35.86 3.66
63 64 6.547880 TGCTAGGGTGAATCACAGTTTTTAAA 59.452 34.615 15.86 0.00 35.86 1.52
64 65 7.232534 TGCTAGGGTGAATCACAGTTTTTAAAT 59.767 33.333 15.86 0.00 35.86 1.40
122 123 6.903883 TCTTTTAGAATATGCGAACCAGAC 57.096 37.500 0.00 0.00 0.00 3.51
145 146 7.563556 AGACAGGGAGATCCTTTTGTTTTAAAA 59.436 33.333 0.00 0.00 45.47 1.52
146 147 7.497595 ACAGGGAGATCCTTTTGTTTTAAAAC 58.502 34.615 21.66 21.66 45.47 2.43
147 148 6.640907 CAGGGAGATCCTTTTGTTTTAAAACG 59.359 38.462 22.57 10.61 45.47 3.60
148 149 5.924254 GGGAGATCCTTTTGTTTTAAAACGG 59.076 40.000 22.57 17.80 37.69 4.44
174 180 1.616159 CCACCAACCCGAATCAAACT 58.384 50.000 0.00 0.00 0.00 2.66
176 182 2.226330 CACCAACCCGAATCAAACTGA 58.774 47.619 0.00 0.00 0.00 3.41
209 215 7.710907 TCAGTGATCCAATTACTGCAGTATTAC 59.289 37.037 26.54 17.40 44.02 1.89
228 234 8.535335 AGTATTACAATAATGCCGAGAGATCAT 58.465 33.333 0.00 0.00 0.00 2.45
232 238 7.180322 ACAATAATGCCGAGAGATCATAGAT 57.820 36.000 0.00 0.00 0.00 1.98
233 239 8.298729 ACAATAATGCCGAGAGATCATAGATA 57.701 34.615 0.00 0.00 0.00 1.98
261 267 7.807687 TTAACAATGTAGAGAAAGTCGTAGC 57.192 36.000 0.00 0.00 0.00 3.58
262 268 5.386958 ACAATGTAGAGAAAGTCGTAGCA 57.613 39.130 0.00 0.00 0.00 3.49
263 269 5.162075 ACAATGTAGAGAAAGTCGTAGCAC 58.838 41.667 0.00 0.00 0.00 4.40
264 270 5.161358 CAATGTAGAGAAAGTCGTAGCACA 58.839 41.667 0.00 0.00 0.00 4.57
265 271 4.421033 TGTAGAGAAAGTCGTAGCACAG 57.579 45.455 0.00 0.00 0.00 3.66
266 272 3.819337 TGTAGAGAAAGTCGTAGCACAGT 59.181 43.478 0.00 0.00 0.00 3.55
267 273 4.999311 TGTAGAGAAAGTCGTAGCACAGTA 59.001 41.667 0.00 0.00 0.00 2.74
268 274 5.646793 TGTAGAGAAAGTCGTAGCACAGTAT 59.353 40.000 0.00 0.00 0.00 2.12
269 275 5.238006 AGAGAAAGTCGTAGCACAGTATC 57.762 43.478 0.00 0.00 0.00 2.24
270 276 4.700692 AGAGAAAGTCGTAGCACAGTATCA 59.299 41.667 0.00 0.00 0.00 2.15
271 277 5.183331 AGAGAAAGTCGTAGCACAGTATCAA 59.817 40.000 0.00 0.00 0.00 2.57
272 278 5.162075 AGAAAGTCGTAGCACAGTATCAAC 58.838 41.667 0.00 0.00 0.00 3.18
273 279 3.132629 AGTCGTAGCACAGTATCAACG 57.867 47.619 0.00 0.00 0.00 4.10
274 280 2.159421 AGTCGTAGCACAGTATCAACGG 60.159 50.000 0.00 0.00 0.00 4.44
275 281 2.086094 TCGTAGCACAGTATCAACGGA 58.914 47.619 0.00 0.00 0.00 4.69
276 282 2.096980 TCGTAGCACAGTATCAACGGAG 59.903 50.000 0.00 0.00 0.00 4.63
277 283 2.194271 GTAGCACAGTATCAACGGAGC 58.806 52.381 0.00 0.00 37.59 4.70
278 284 0.898320 AGCACAGTATCAACGGAGCT 59.102 50.000 0.00 0.00 41.38 4.09
279 285 1.134965 AGCACAGTATCAACGGAGCTC 60.135 52.381 4.71 4.71 42.18 4.09
280 286 1.927895 CACAGTATCAACGGAGCTCC 58.072 55.000 23.79 23.79 0.00 4.70
281 287 1.478510 CACAGTATCAACGGAGCTCCT 59.521 52.381 29.73 13.77 0.00 3.69
282 288 1.478510 ACAGTATCAACGGAGCTCCTG 59.521 52.381 29.73 23.79 0.00 3.86
283 289 1.751351 CAGTATCAACGGAGCTCCTGA 59.249 52.381 29.73 26.05 0.00 3.86
284 290 2.028130 AGTATCAACGGAGCTCCTGAG 58.972 52.381 29.73 17.19 0.00 3.35
285 291 1.751924 GTATCAACGGAGCTCCTGAGT 59.248 52.381 29.73 17.87 0.00 3.41
286 292 2.145397 ATCAACGGAGCTCCTGAGTA 57.855 50.000 29.73 12.13 0.00 2.59
287 293 1.174783 TCAACGGAGCTCCTGAGTAC 58.825 55.000 29.73 2.36 0.00 2.73
288 294 0.888619 CAACGGAGCTCCTGAGTACA 59.111 55.000 29.73 0.00 0.00 2.90
289 295 1.272490 CAACGGAGCTCCTGAGTACAA 59.728 52.381 29.73 0.00 0.00 2.41
290 296 1.178276 ACGGAGCTCCTGAGTACAAG 58.822 55.000 29.73 13.52 0.00 3.16
291 297 1.271982 ACGGAGCTCCTGAGTACAAGA 60.272 52.381 29.73 0.00 0.00 3.02
292 298 1.403679 CGGAGCTCCTGAGTACAAGAG 59.596 57.143 29.73 6.34 37.57 2.85
293 299 2.729194 GGAGCTCCTGAGTACAAGAGA 58.271 52.381 26.25 0.00 36.90 3.10
294 300 3.295973 GGAGCTCCTGAGTACAAGAGAT 58.704 50.000 26.25 0.00 36.90 2.75
295 301 4.465886 GGAGCTCCTGAGTACAAGAGATA 58.534 47.826 26.25 0.00 36.90 1.98
296 302 4.890581 GGAGCTCCTGAGTACAAGAGATAA 59.109 45.833 26.25 0.00 36.90 1.75
297 303 5.538433 GGAGCTCCTGAGTACAAGAGATAAT 59.462 44.000 26.25 0.00 36.90 1.28
298 304 6.403866 AGCTCCTGAGTACAAGAGATAATG 57.596 41.667 0.00 0.00 36.90 1.90
299 305 5.896678 AGCTCCTGAGTACAAGAGATAATGT 59.103 40.000 0.00 0.00 36.90 2.71
300 306 7.063593 AGCTCCTGAGTACAAGAGATAATGTA 58.936 38.462 0.00 0.00 36.90 2.29
301 307 7.230510 AGCTCCTGAGTACAAGAGATAATGTAG 59.769 40.741 0.00 0.00 36.90 2.74
302 308 7.013846 GCTCCTGAGTACAAGAGATAATGTAGT 59.986 40.741 0.00 0.00 36.90 2.73
303 309 8.824756 TCCTGAGTACAAGAGATAATGTAGTT 57.175 34.615 0.00 0.00 0.00 2.24
304 310 8.904834 TCCTGAGTACAAGAGATAATGTAGTTC 58.095 37.037 0.00 0.00 0.00 3.01
305 311 7.858382 CCTGAGTACAAGAGATAATGTAGTTCG 59.142 40.741 0.00 0.00 0.00 3.95
306 312 7.194278 TGAGTACAAGAGATAATGTAGTTCGC 58.806 38.462 0.00 0.00 0.00 4.70
307 313 6.505272 AGTACAAGAGATAATGTAGTTCGCC 58.495 40.000 0.00 0.00 0.00 5.54
308 314 4.360563 ACAAGAGATAATGTAGTTCGCCG 58.639 43.478 0.00 0.00 0.00 6.46
309 315 3.014604 AGAGATAATGTAGTTCGCCGC 57.985 47.619 0.00 0.00 0.00 6.53
310 316 1.714460 GAGATAATGTAGTTCGCCGCG 59.286 52.381 6.39 6.39 0.00 6.46
311 317 1.066605 AGATAATGTAGTTCGCCGCGT 59.933 47.619 13.39 0.00 0.00 6.01
312 318 1.450905 GATAATGTAGTTCGCCGCGTC 59.549 52.381 13.39 7.58 0.00 5.19
313 319 0.526096 TAATGTAGTTCGCCGCGTCC 60.526 55.000 13.39 4.52 0.00 4.79
314 320 2.221906 AATGTAGTTCGCCGCGTCCT 62.222 55.000 13.39 11.83 0.00 3.85
315 321 2.578981 GTAGTTCGCCGCGTCCTC 60.579 66.667 13.39 2.27 0.00 3.71
316 322 2.749044 TAGTTCGCCGCGTCCTCT 60.749 61.111 13.39 9.32 0.00 3.69
317 323 2.758089 TAGTTCGCCGCGTCCTCTC 61.758 63.158 13.39 0.00 0.00 3.20
318 324 4.415332 GTTCGCCGCGTCCTCTCA 62.415 66.667 13.39 0.00 0.00 3.27
319 325 4.415332 TTCGCCGCGTCCTCTCAC 62.415 66.667 13.39 0.00 0.00 3.51
323 329 4.477975 CCGCGTCCTCTCACGACC 62.478 72.222 4.92 0.00 42.69 4.79
324 330 3.733960 CGCGTCCTCTCACGACCA 61.734 66.667 0.00 0.00 42.69 4.02
325 331 2.649034 GCGTCCTCTCACGACCAA 59.351 61.111 0.00 0.00 42.69 3.67
326 332 1.006571 GCGTCCTCTCACGACCAAA 60.007 57.895 0.00 0.00 42.69 3.28
327 333 1.282930 GCGTCCTCTCACGACCAAAC 61.283 60.000 0.00 0.00 42.69 2.93
328 334 0.314302 CGTCCTCTCACGACCAAACT 59.686 55.000 0.00 0.00 42.69 2.66
329 335 1.784525 GTCCTCTCACGACCAAACTG 58.215 55.000 0.00 0.00 0.00 3.16
330 336 1.340248 GTCCTCTCACGACCAAACTGA 59.660 52.381 0.00 0.00 0.00 3.41
331 337 2.028930 GTCCTCTCACGACCAAACTGAT 60.029 50.000 0.00 0.00 0.00 2.90
332 338 2.632996 TCCTCTCACGACCAAACTGATT 59.367 45.455 0.00 0.00 0.00 2.57
333 339 3.071023 TCCTCTCACGACCAAACTGATTT 59.929 43.478 0.00 0.00 0.00 2.17
334 340 3.187227 CCTCTCACGACCAAACTGATTTG 59.813 47.826 0.00 0.00 44.19 2.32
345 351 4.660789 AAACTGATTTGAGCTGCTGTTT 57.339 36.364 7.01 6.54 0.00 2.83
346 352 3.637998 ACTGATTTGAGCTGCTGTTTG 57.362 42.857 7.01 0.00 0.00 2.93
347 353 2.295349 ACTGATTTGAGCTGCTGTTTGG 59.705 45.455 7.01 0.00 0.00 3.28
348 354 1.614903 TGATTTGAGCTGCTGTTTGGG 59.385 47.619 7.01 0.00 0.00 4.12
349 355 1.615392 GATTTGAGCTGCTGTTTGGGT 59.385 47.619 7.01 0.00 0.00 4.51
350 356 0.746063 TTTGAGCTGCTGTTTGGGTG 59.254 50.000 7.01 0.00 0.00 4.61
351 357 0.106769 TTGAGCTGCTGTTTGGGTGA 60.107 50.000 7.01 0.00 0.00 4.02
352 358 0.111061 TGAGCTGCTGTTTGGGTGAT 59.889 50.000 7.01 0.00 0.00 3.06
353 359 1.251251 GAGCTGCTGTTTGGGTGATT 58.749 50.000 7.01 0.00 0.00 2.57
354 360 1.200948 GAGCTGCTGTTTGGGTGATTC 59.799 52.381 7.01 0.00 0.00 2.52
355 361 0.244721 GCTGCTGTTTGGGTGATTCC 59.755 55.000 0.00 0.00 0.00 3.01
356 362 1.619654 CTGCTGTTTGGGTGATTCCA 58.380 50.000 0.00 0.00 38.11 3.53
357 363 2.173519 CTGCTGTTTGGGTGATTCCAT 58.826 47.619 0.00 0.00 36.58 3.41
358 364 1.894466 TGCTGTTTGGGTGATTCCATG 59.106 47.619 0.00 0.00 36.58 3.66
359 365 2.170166 GCTGTTTGGGTGATTCCATGA 58.830 47.619 0.00 0.00 36.58 3.07
360 366 2.165030 GCTGTTTGGGTGATTCCATGAG 59.835 50.000 0.00 0.00 36.58 2.90
361 367 3.424703 CTGTTTGGGTGATTCCATGAGT 58.575 45.455 0.00 0.00 36.58 3.41
362 368 3.828451 CTGTTTGGGTGATTCCATGAGTT 59.172 43.478 0.00 0.00 36.58 3.01
363 369 4.991776 TGTTTGGGTGATTCCATGAGTTA 58.008 39.130 0.00 0.00 36.58 2.24
364 370 5.389520 TGTTTGGGTGATTCCATGAGTTAA 58.610 37.500 0.00 0.00 36.58 2.01
365 371 6.015918 TGTTTGGGTGATTCCATGAGTTAAT 58.984 36.000 0.00 0.00 36.58 1.40
366 372 6.496565 TGTTTGGGTGATTCCATGAGTTAATT 59.503 34.615 0.00 0.00 36.58 1.40
367 373 7.016072 TGTTTGGGTGATTCCATGAGTTAATTT 59.984 33.333 0.00 0.00 36.58 1.82
368 374 6.773976 TGGGTGATTCCATGAGTTAATTTC 57.226 37.500 0.00 0.00 38.11 2.17
369 375 5.656416 TGGGTGATTCCATGAGTTAATTTCC 59.344 40.000 0.00 0.00 38.11 3.13
370 376 5.656416 GGGTGATTCCATGAGTTAATTTCCA 59.344 40.000 0.00 0.00 38.11 3.53
371 377 6.324770 GGGTGATTCCATGAGTTAATTTCCAT 59.675 38.462 0.00 0.00 38.11 3.41
372 378 7.428826 GGTGATTCCATGAGTTAATTTCCATC 58.571 38.462 0.00 0.00 35.97 3.51
373 379 7.134815 GTGATTCCATGAGTTAATTTCCATCG 58.865 38.462 0.00 0.00 0.00 3.84
374 380 6.828273 TGATTCCATGAGTTAATTTCCATCGT 59.172 34.615 0.00 0.00 0.00 3.73
375 381 7.339212 TGATTCCATGAGTTAATTTCCATCGTT 59.661 33.333 0.00 0.00 0.00 3.85
376 382 6.677781 TCCATGAGTTAATTTCCATCGTTC 57.322 37.500 0.00 0.00 0.00 3.95
377 383 6.176896 TCCATGAGTTAATTTCCATCGTTCA 58.823 36.000 0.00 0.00 0.00 3.18
378 384 6.828273 TCCATGAGTTAATTTCCATCGTTCAT 59.172 34.615 0.00 0.00 0.00 2.57
379 385 7.990314 TCCATGAGTTAATTTCCATCGTTCATA 59.010 33.333 0.00 0.00 0.00 2.15
380 386 8.070171 CCATGAGTTAATTTCCATCGTTCATAC 58.930 37.037 0.00 0.00 0.00 2.39
381 387 7.548196 TGAGTTAATTTCCATCGTTCATACC 57.452 36.000 0.00 0.00 0.00 2.73
382 388 7.106890 TGAGTTAATTTCCATCGTTCATACCA 58.893 34.615 0.00 0.00 0.00 3.25
383 389 7.065324 TGAGTTAATTTCCATCGTTCATACCAC 59.935 37.037 0.00 0.00 0.00 4.16
384 390 6.882140 AGTTAATTTCCATCGTTCATACCACA 59.118 34.615 0.00 0.00 0.00 4.17
385 391 5.818136 AATTTCCATCGTTCATACCACAG 57.182 39.130 0.00 0.00 0.00 3.66
386 392 2.979814 TCCATCGTTCATACCACAGG 57.020 50.000 0.00 0.00 0.00 4.00
387 393 1.134521 TCCATCGTTCATACCACAGGC 60.135 52.381 0.00 0.00 0.00 4.85
388 394 1.406751 CCATCGTTCATACCACAGGCA 60.407 52.381 0.00 0.00 0.00 4.75
389 395 1.665679 CATCGTTCATACCACAGGCAC 59.334 52.381 0.00 0.00 0.00 5.01
390 396 0.036765 TCGTTCATACCACAGGCACC 60.037 55.000 0.00 0.00 0.00 5.01
391 397 0.321210 CGTTCATACCACAGGCACCA 60.321 55.000 0.00 0.00 0.00 4.17
392 398 1.678728 CGTTCATACCACAGGCACCAT 60.679 52.381 0.00 0.00 0.00 3.55
393 399 1.745087 GTTCATACCACAGGCACCATG 59.255 52.381 0.00 0.00 0.00 3.66
394 400 0.394216 TCATACCACAGGCACCATGC 60.394 55.000 0.00 0.00 44.08 4.06
395 401 0.394762 CATACCACAGGCACCATGCT 60.395 55.000 0.13 0.00 44.28 3.79
396 402 1.134128 CATACCACAGGCACCATGCTA 60.134 52.381 0.13 0.00 44.28 3.49
397 403 0.251916 TACCACAGGCACCATGCTAC 59.748 55.000 0.13 0.00 44.28 3.58
398 404 1.002257 CCACAGGCACCATGCTACA 60.002 57.895 0.13 0.00 44.28 2.74
399 405 1.028330 CCACAGGCACCATGCTACAG 61.028 60.000 0.13 0.00 44.28 2.74
400 406 0.321919 CACAGGCACCATGCTACAGT 60.322 55.000 0.13 0.00 44.28 3.55
401 407 0.036010 ACAGGCACCATGCTACAGTC 60.036 55.000 0.13 0.00 44.28 3.51
402 408 1.086067 CAGGCACCATGCTACAGTCG 61.086 60.000 0.13 0.00 44.28 4.18
403 409 2.464459 GGCACCATGCTACAGTCGC 61.464 63.158 0.13 0.00 44.28 5.19
404 410 1.448540 GCACCATGCTACAGTCGCT 60.449 57.895 0.00 0.00 40.96 4.93
405 411 0.179111 GCACCATGCTACAGTCGCTA 60.179 55.000 0.00 0.00 40.96 4.26
406 412 1.560923 CACCATGCTACAGTCGCTAC 58.439 55.000 0.00 0.00 0.00 3.58
407 413 1.135112 CACCATGCTACAGTCGCTACA 60.135 52.381 0.00 0.00 0.00 2.74
408 414 1.135139 ACCATGCTACAGTCGCTACAG 59.865 52.381 0.00 0.00 0.00 2.74
409 415 1.135139 CCATGCTACAGTCGCTACAGT 59.865 52.381 0.00 0.00 0.00 3.55
410 416 2.417379 CCATGCTACAGTCGCTACAGTT 60.417 50.000 0.00 0.00 0.00 3.16
411 417 3.254060 CATGCTACAGTCGCTACAGTTT 58.746 45.455 0.00 0.00 0.00 2.66
412 418 2.942710 TGCTACAGTCGCTACAGTTTC 58.057 47.619 0.00 0.00 0.00 2.78
413 419 2.557056 TGCTACAGTCGCTACAGTTTCT 59.443 45.455 0.00 0.00 0.00 2.52
414 420 3.172824 GCTACAGTCGCTACAGTTTCTC 58.827 50.000 0.00 0.00 0.00 2.87
415 421 2.333389 ACAGTCGCTACAGTTTCTCG 57.667 50.000 0.00 0.00 0.00 4.04
416 422 1.607628 ACAGTCGCTACAGTTTCTCGT 59.392 47.619 0.00 0.00 0.00 4.18
417 423 2.810274 ACAGTCGCTACAGTTTCTCGTA 59.190 45.455 0.00 0.00 0.00 3.43
418 424 3.251729 ACAGTCGCTACAGTTTCTCGTAA 59.748 43.478 0.00 0.00 0.00 3.18
419 425 4.082895 ACAGTCGCTACAGTTTCTCGTAAT 60.083 41.667 0.00 0.00 0.00 1.89
420 426 4.857588 CAGTCGCTACAGTTTCTCGTAATT 59.142 41.667 0.00 0.00 0.00 1.40
421 427 5.345202 CAGTCGCTACAGTTTCTCGTAATTT 59.655 40.000 0.00 0.00 0.00 1.82
422 428 5.345202 AGTCGCTACAGTTTCTCGTAATTTG 59.655 40.000 0.00 0.00 0.00 2.32
423 429 4.624024 TCGCTACAGTTTCTCGTAATTTGG 59.376 41.667 0.00 0.00 0.00 3.28
424 430 4.624024 CGCTACAGTTTCTCGTAATTTGGA 59.376 41.667 0.00 0.00 0.00 3.53
425 431 5.119588 CGCTACAGTTTCTCGTAATTTGGAA 59.880 40.000 0.00 0.00 0.00 3.53
426 432 6.534934 GCTACAGTTTCTCGTAATTTGGAAG 58.465 40.000 0.00 0.00 0.00 3.46
427 433 5.941948 ACAGTTTCTCGTAATTTGGAAGG 57.058 39.130 0.00 0.00 0.00 3.46
428 434 4.215613 ACAGTTTCTCGTAATTTGGAAGGC 59.784 41.667 0.00 0.00 0.00 4.35
429 435 3.756963 AGTTTCTCGTAATTTGGAAGGCC 59.243 43.478 0.00 0.00 0.00 5.19
430 436 2.413310 TCTCGTAATTTGGAAGGCCC 57.587 50.000 0.00 0.00 0.00 5.80
431 437 1.631388 TCTCGTAATTTGGAAGGCCCA 59.369 47.619 0.00 0.00 44.93 5.36
441 447 3.297134 TGGAAGGCCCAAGATATGAAC 57.703 47.619 0.00 0.00 43.29 3.18
442 448 2.852449 TGGAAGGCCCAAGATATGAACT 59.148 45.455 0.00 0.00 43.29 3.01
443 449 3.269381 TGGAAGGCCCAAGATATGAACTT 59.731 43.478 0.00 0.00 43.29 2.66
444 450 3.885901 GGAAGGCCCAAGATATGAACTTC 59.114 47.826 0.00 0.00 34.72 3.01
445 451 4.526970 GAAGGCCCAAGATATGAACTTCA 58.473 43.478 0.00 0.00 35.15 3.02
446 452 4.803329 AGGCCCAAGATATGAACTTCAT 57.197 40.909 9.26 9.26 40.72 2.57
447 453 4.467769 AGGCCCAAGATATGAACTTCATG 58.532 43.478 13.66 0.00 37.70 3.07
448 454 4.166725 AGGCCCAAGATATGAACTTCATGA 59.833 41.667 13.66 0.00 37.70 3.07
449 455 5.075493 GGCCCAAGATATGAACTTCATGAT 58.925 41.667 13.66 4.53 37.70 2.45
450 456 5.537674 GGCCCAAGATATGAACTTCATGATT 59.462 40.000 13.66 3.98 37.70 2.57
451 457 6.294397 GGCCCAAGATATGAACTTCATGATTC 60.294 42.308 13.66 0.00 37.70 2.52
452 458 6.489361 GCCCAAGATATGAACTTCATGATTCT 59.511 38.462 13.66 10.03 37.70 2.40
453 459 7.014038 GCCCAAGATATGAACTTCATGATTCTT 59.986 37.037 13.66 14.22 37.70 2.52
454 460 8.566260 CCCAAGATATGAACTTCATGATTCTTC 58.434 37.037 13.66 5.83 37.70 2.87
455 461 9.117183 CCAAGATATGAACTTCATGATTCTTCA 57.883 33.333 13.66 10.35 37.70 3.02
461 467 7.332213 TGAACTTCATGATTCTTCAAACACA 57.668 32.000 9.79 0.00 34.96 3.72
462 468 7.770201 TGAACTTCATGATTCTTCAAACACAA 58.230 30.769 9.79 0.00 34.96 3.33
463 469 7.701924 TGAACTTCATGATTCTTCAAACACAAC 59.298 33.333 9.79 0.00 34.96 3.32
464 470 7.099266 ACTTCATGATTCTTCAAACACAACA 57.901 32.000 0.00 0.00 34.96 3.33
465 471 7.546358 ACTTCATGATTCTTCAAACACAACAA 58.454 30.769 0.00 0.00 34.96 2.83
466 472 7.703621 ACTTCATGATTCTTCAAACACAACAAG 59.296 33.333 0.00 0.00 34.96 3.16
467 473 7.099266 TCATGATTCTTCAAACACAACAAGT 57.901 32.000 0.00 0.00 34.96 3.16
468 474 6.974048 TCATGATTCTTCAAACACAACAAGTG 59.026 34.615 0.00 0.00 43.98 3.16
483 489 8.767944 CACAACAAGTGTTCAAGTATTACTTC 57.232 34.615 6.10 0.00 43.40 3.01
484 490 8.612619 CACAACAAGTGTTCAAGTATTACTTCT 58.387 33.333 6.10 0.00 43.40 2.85
485 491 8.827677 ACAACAAGTGTTCAAGTATTACTTCTC 58.172 33.333 6.10 1.74 37.01 2.87
486 492 7.964604 ACAAGTGTTCAAGTATTACTTCTCC 57.035 36.000 6.10 0.00 36.03 3.71
487 493 7.506114 ACAAGTGTTCAAGTATTACTTCTCCA 58.494 34.615 6.10 1.25 36.03 3.86
488 494 7.657761 ACAAGTGTTCAAGTATTACTTCTCCAG 59.342 37.037 6.10 0.00 36.03 3.86
489 495 6.166982 AGTGTTCAAGTATTACTTCTCCAGC 58.833 40.000 6.10 0.00 36.03 4.85
490 496 5.351740 GTGTTCAAGTATTACTTCTCCAGCC 59.648 44.000 6.10 0.00 36.03 4.85
491 497 4.755266 TCAAGTATTACTTCTCCAGCCC 57.245 45.455 6.10 0.00 36.03 5.19
492 498 3.132289 TCAAGTATTACTTCTCCAGCCCG 59.868 47.826 6.10 0.00 36.03 6.13
493 499 2.040178 AGTATTACTTCTCCAGCCCGG 58.960 52.381 0.00 0.00 0.00 5.73
494 500 1.761198 GTATTACTTCTCCAGCCCGGT 59.239 52.381 0.00 0.00 35.57 5.28
495 501 0.831307 ATTACTTCTCCAGCCCGGTC 59.169 55.000 0.00 0.00 35.57 4.79
496 502 1.262640 TTACTTCTCCAGCCCGGTCC 61.263 60.000 0.00 0.00 35.57 4.46
497 503 2.449967 TACTTCTCCAGCCCGGTCCA 62.450 60.000 0.00 0.00 35.57 4.02
498 504 3.316573 CTTCTCCAGCCCGGTCCAC 62.317 68.421 0.00 0.00 35.57 4.02
510 516 4.489771 GTCCACCCCGATGCCCTG 62.490 72.222 0.00 0.00 0.00 4.45
512 518 4.047125 CCACCCCGATGCCCTGTT 62.047 66.667 0.00 0.00 0.00 3.16
513 519 2.035626 CACCCCGATGCCCTGTTT 59.964 61.111 0.00 0.00 0.00 2.83
514 520 2.035626 ACCCCGATGCCCTGTTTG 59.964 61.111 0.00 0.00 0.00 2.93
515 521 2.354729 CCCCGATGCCCTGTTTGA 59.645 61.111 0.00 0.00 0.00 2.69
516 522 1.076777 CCCCGATGCCCTGTTTGAT 60.077 57.895 0.00 0.00 0.00 2.57
517 523 1.386525 CCCCGATGCCCTGTTTGATG 61.387 60.000 0.00 0.00 0.00 3.07
518 524 0.394216 CCCGATGCCCTGTTTGATGA 60.394 55.000 0.00 0.00 0.00 2.92
519 525 1.683943 CCGATGCCCTGTTTGATGAT 58.316 50.000 0.00 0.00 0.00 2.45
520 526 2.487086 CCCGATGCCCTGTTTGATGATA 60.487 50.000 0.00 0.00 0.00 2.15
521 527 3.415212 CCGATGCCCTGTTTGATGATAT 58.585 45.455 0.00 0.00 0.00 1.63
522 528 3.438087 CCGATGCCCTGTTTGATGATATC 59.562 47.826 0.00 0.00 0.00 1.63
523 529 4.067192 CGATGCCCTGTTTGATGATATCA 58.933 43.478 8.10 8.10 37.55 2.15
524 530 4.698780 CGATGCCCTGTTTGATGATATCAT 59.301 41.667 18.21 18.21 39.39 2.45
535 541 3.452474 GATGATATCATCCACGCCTAGC 58.548 50.000 28.43 6.26 45.24 3.42
536 542 2.247358 TGATATCATCCACGCCTAGCA 58.753 47.619 0.00 0.00 0.00 3.49
537 543 2.232208 TGATATCATCCACGCCTAGCAG 59.768 50.000 0.00 0.00 0.00 4.24
538 544 1.704641 TATCATCCACGCCTAGCAGT 58.295 50.000 0.00 0.00 0.00 4.40
539 545 0.833287 ATCATCCACGCCTAGCAGTT 59.167 50.000 0.00 0.00 0.00 3.16
540 546 0.613260 TCATCCACGCCTAGCAGTTT 59.387 50.000 0.00 0.00 0.00 2.66
541 547 1.003118 TCATCCACGCCTAGCAGTTTT 59.997 47.619 0.00 0.00 0.00 2.43
542 548 1.398390 CATCCACGCCTAGCAGTTTTC 59.602 52.381 0.00 0.00 0.00 2.29
543 549 0.394938 TCCACGCCTAGCAGTTTTCA 59.605 50.000 0.00 0.00 0.00 2.69
544 550 0.517316 CCACGCCTAGCAGTTTTCAC 59.483 55.000 0.00 0.00 0.00 3.18
545 551 1.225855 CACGCCTAGCAGTTTTCACA 58.774 50.000 0.00 0.00 0.00 3.58
546 552 1.069906 CACGCCTAGCAGTTTTCACAC 60.070 52.381 0.00 0.00 0.00 3.82
547 553 1.225855 CGCCTAGCAGTTTTCACACA 58.774 50.000 0.00 0.00 0.00 3.72
548 554 1.806542 CGCCTAGCAGTTTTCACACAT 59.193 47.619 0.00 0.00 0.00 3.21
549 555 2.159653 CGCCTAGCAGTTTTCACACATC 60.160 50.000 0.00 0.00 0.00 3.06
550 556 2.162408 GCCTAGCAGTTTTCACACATCC 59.838 50.000 0.00 0.00 0.00 3.51
551 557 2.416547 CCTAGCAGTTTTCACACATCCG 59.583 50.000 0.00 0.00 0.00 4.18
552 558 0.593128 AGCAGTTTTCACACATCCGC 59.407 50.000 0.00 0.00 0.00 5.54
553 559 0.310543 GCAGTTTTCACACATCCGCA 59.689 50.000 0.00 0.00 0.00 5.69
554 560 1.268999 GCAGTTTTCACACATCCGCAA 60.269 47.619 0.00 0.00 0.00 4.85
555 561 2.384382 CAGTTTTCACACATCCGCAAC 58.616 47.619 0.00 0.00 0.00 4.17
556 562 2.033299 CAGTTTTCACACATCCGCAACT 59.967 45.455 0.00 0.00 0.00 3.16
557 563 3.249799 CAGTTTTCACACATCCGCAACTA 59.750 43.478 0.00 0.00 0.00 2.24
558 564 3.498397 AGTTTTCACACATCCGCAACTAG 59.502 43.478 0.00 0.00 0.00 2.57
559 565 1.438651 TTCACACATCCGCAACTAGC 58.561 50.000 0.00 0.00 40.87 3.42
560 566 0.608130 TCACACATCCGCAACTAGCT 59.392 50.000 0.00 0.00 42.61 3.32
561 567 1.001974 TCACACATCCGCAACTAGCTT 59.998 47.619 0.00 0.00 42.61 3.74
562 568 1.129251 CACACATCCGCAACTAGCTTG 59.871 52.381 0.00 0.00 42.61 4.01
574 580 5.565723 CAACTAGCTTGCATTCAAACAAC 57.434 39.130 0.00 0.00 0.00 3.32
575 581 4.916983 ACTAGCTTGCATTCAAACAACA 57.083 36.364 0.00 0.00 0.00 3.33
576 582 5.261209 ACTAGCTTGCATTCAAACAACAA 57.739 34.783 0.00 0.00 0.00 2.83
577 583 5.659463 ACTAGCTTGCATTCAAACAACAAA 58.341 33.333 0.00 0.00 0.00 2.83
578 584 6.282930 ACTAGCTTGCATTCAAACAACAAAT 58.717 32.000 0.00 0.00 0.00 2.32
579 585 5.412526 AGCTTGCATTCAAACAACAAATG 57.587 34.783 0.00 0.00 34.30 2.32
580 586 4.877251 AGCTTGCATTCAAACAACAAATGT 59.123 33.333 0.00 0.00 46.82 2.71
593 599 5.313749 CAACAAATGTTTGATGTTGTCCG 57.686 39.130 12.09 0.00 45.44 4.79
594 600 3.976169 ACAAATGTTTGATGTTGTCCGG 58.024 40.909 12.09 0.00 40.55 5.14
595 601 3.383185 ACAAATGTTTGATGTTGTCCGGT 59.617 39.130 12.09 0.00 40.55 5.28
596 602 3.915437 AATGTTTGATGTTGTCCGGTC 57.085 42.857 0.00 0.00 0.00 4.79
597 603 1.600023 TGTTTGATGTTGTCCGGTCC 58.400 50.000 0.00 0.00 0.00 4.46
598 604 1.134068 TGTTTGATGTTGTCCGGTCCA 60.134 47.619 0.00 0.00 0.00 4.02
599 605 1.950909 GTTTGATGTTGTCCGGTCCAA 59.049 47.619 0.00 2.96 0.00 3.53
600 606 2.350057 TTGATGTTGTCCGGTCCAAA 57.650 45.000 0.00 0.00 0.00 3.28
601 607 1.890876 TGATGTTGTCCGGTCCAAAG 58.109 50.000 0.00 0.00 0.00 2.77
602 608 1.142060 TGATGTTGTCCGGTCCAAAGT 59.858 47.619 0.00 0.00 0.00 2.66
603 609 2.227194 GATGTTGTCCGGTCCAAAGTT 58.773 47.619 0.00 0.00 0.00 2.66
604 610 1.384525 TGTTGTCCGGTCCAAAGTTG 58.615 50.000 0.00 0.00 0.00 3.16
605 611 0.030235 GTTGTCCGGTCCAAAGTTGC 59.970 55.000 0.00 0.00 0.00 4.17
606 612 0.394488 TTGTCCGGTCCAAAGTTGCA 60.394 50.000 0.00 0.00 0.00 4.08
607 613 0.179004 TGTCCGGTCCAAAGTTGCAT 60.179 50.000 0.00 0.00 0.00 3.96
608 614 0.240945 GTCCGGTCCAAAGTTGCATG 59.759 55.000 0.00 0.00 0.00 4.06
609 615 0.109532 TCCGGTCCAAAGTTGCATGA 59.890 50.000 0.00 0.00 0.00 3.07
610 616 1.176527 CCGGTCCAAAGTTGCATGAT 58.823 50.000 0.00 0.00 0.00 2.45
611 617 1.135315 CCGGTCCAAAGTTGCATGATG 60.135 52.381 0.00 0.00 0.00 3.07
612 618 1.135315 CGGTCCAAAGTTGCATGATGG 60.135 52.381 0.00 0.00 0.00 3.51
613 619 1.205417 GGTCCAAAGTTGCATGATGGG 59.795 52.381 0.00 0.00 0.00 4.00
614 620 0.896923 TCCAAAGTTGCATGATGGGC 59.103 50.000 0.00 0.00 0.00 5.36
615 621 0.609151 CCAAAGTTGCATGATGGGCA 59.391 50.000 0.00 0.00 40.00 5.36
621 627 0.609151 TTGCATGATGGGCAACTTGG 59.391 50.000 0.00 0.00 45.57 3.61
622 628 0.251698 TGCATGATGGGCAACTTGGA 60.252 50.000 0.00 0.00 38.54 3.53
623 629 1.117150 GCATGATGGGCAACTTGGAT 58.883 50.000 0.00 0.00 0.00 3.41
624 630 1.483415 GCATGATGGGCAACTTGGATT 59.517 47.619 0.00 0.00 0.00 3.01
625 631 2.694628 GCATGATGGGCAACTTGGATTA 59.305 45.455 0.00 0.00 0.00 1.75
626 632 3.132646 GCATGATGGGCAACTTGGATTAA 59.867 43.478 0.00 0.00 0.00 1.40
627 633 4.202284 GCATGATGGGCAACTTGGATTAAT 60.202 41.667 0.00 0.00 0.00 1.40
628 634 5.535333 CATGATGGGCAACTTGGATTAATC 58.465 41.667 6.93 6.93 0.00 1.75
629 635 4.870636 TGATGGGCAACTTGGATTAATCT 58.129 39.130 14.95 0.00 0.00 2.40
630 636 5.271598 TGATGGGCAACTTGGATTAATCTT 58.728 37.500 14.95 0.00 0.00 2.40
631 637 5.721000 TGATGGGCAACTTGGATTAATCTTT 59.279 36.000 14.95 1.71 0.00 2.52
632 638 6.894654 TGATGGGCAACTTGGATTAATCTTTA 59.105 34.615 14.95 0.11 0.00 1.85
633 639 7.564660 TGATGGGCAACTTGGATTAATCTTTAT 59.435 33.333 14.95 0.00 0.00 1.40
634 640 9.077885 GATGGGCAACTTGGATTAATCTTTATA 57.922 33.333 14.95 0.00 0.00 0.98
635 641 9.605951 ATGGGCAACTTGGATTAATCTTTATAT 57.394 29.630 14.95 0.00 0.00 0.86
636 642 8.859090 TGGGCAACTTGGATTAATCTTTATATG 58.141 33.333 14.95 8.74 0.00 1.78
637 643 7.814587 GGGCAACTTGGATTAATCTTTATATGC 59.185 37.037 14.95 16.11 0.00 3.14
638 644 8.579863 GGCAACTTGGATTAATCTTTATATGCT 58.420 33.333 14.95 0.00 0.00 3.79
639 645 9.971922 GCAACTTGGATTAATCTTTATATGCTT 57.028 29.630 14.95 0.00 0.00 3.91
658 664 6.872628 TGCTTATTAGCAAGGATTGATCTG 57.127 37.500 3.44 0.00 44.15 2.90
659 665 5.240183 TGCTTATTAGCAAGGATTGATCTGC 59.760 40.000 3.44 0.00 44.15 4.26
660 666 5.240183 GCTTATTAGCAAGGATTGATCTGCA 59.760 40.000 0.00 0.00 44.15 4.41
661 667 6.238842 GCTTATTAGCAAGGATTGATCTGCAA 60.239 38.462 0.00 0.00 44.15 4.08
662 668 5.769484 ATTAGCAAGGATTGATCTGCAAG 57.231 39.130 5.32 0.00 44.15 4.01
663 669 2.376109 AGCAAGGATTGATCTGCAAGG 58.624 47.619 5.32 0.00 44.15 3.61
664 670 2.949054 AGCAAGGATTGATCTGCAAGGG 60.949 50.000 5.32 0.00 44.15 3.95
665 671 5.224452 AGCAAGGATTGATCTGCAAGGGA 62.224 47.826 5.32 0.00 44.15 4.20
666 672 3.967467 AAGGATTGATCTGCAAGGGAT 57.033 42.857 0.00 0.00 40.42 3.85
667 673 3.505480 AGGATTGATCTGCAAGGGATC 57.495 47.619 7.34 7.34 40.42 3.36
668 674 2.149578 GGATTGATCTGCAAGGGATCG 58.850 52.381 9.21 0.00 41.56 3.69
669 675 1.534595 GATTGATCTGCAAGGGATCGC 59.465 52.381 0.54 0.54 41.56 4.58
670 676 0.811219 TTGATCTGCAAGGGATCGCG 60.811 55.000 0.00 0.00 41.56 5.87
671 677 2.590007 ATCTGCAAGGGATCGCGC 60.590 61.111 0.00 0.00 0.00 6.86
672 678 2.985512 GATCTGCAAGGGATCGCGCT 62.986 60.000 5.56 0.00 39.23 5.92
673 679 1.748329 ATCTGCAAGGGATCGCGCTA 61.748 55.000 5.56 0.00 36.11 4.26
674 680 1.301244 CTGCAAGGGATCGCGCTAT 60.301 57.895 5.56 0.00 36.11 2.97
675 681 1.563435 CTGCAAGGGATCGCGCTATG 61.563 60.000 5.56 4.18 36.11 2.23
676 682 1.300931 GCAAGGGATCGCGCTATGA 60.301 57.895 5.56 0.00 36.11 2.15
677 683 0.880278 GCAAGGGATCGCGCTATGAA 60.880 55.000 5.56 0.00 36.11 2.57
678 684 1.800805 CAAGGGATCGCGCTATGAAT 58.199 50.000 5.56 0.00 36.11 2.57
679 685 1.728971 CAAGGGATCGCGCTATGAATC 59.271 52.381 5.56 0.00 36.11 2.52
680 686 0.247736 AGGGATCGCGCTATGAATCC 59.752 55.000 12.52 12.52 35.26 3.01
681 687 0.247736 GGGATCGCGCTATGAATCCT 59.752 55.000 18.36 0.00 0.00 3.24
682 688 1.338200 GGGATCGCGCTATGAATCCTT 60.338 52.381 18.36 0.00 0.00 3.36
683 689 1.728971 GGATCGCGCTATGAATCCTTG 59.271 52.381 13.40 0.00 0.00 3.61
684 690 2.610479 GGATCGCGCTATGAATCCTTGA 60.610 50.000 13.40 0.00 0.00 3.02
685 691 2.820059 TCGCGCTATGAATCCTTGAT 57.180 45.000 5.56 0.00 0.00 2.57
686 692 3.934457 TCGCGCTATGAATCCTTGATA 57.066 42.857 5.56 0.00 0.00 2.15
687 693 4.251543 TCGCGCTATGAATCCTTGATAA 57.748 40.909 5.56 0.00 0.00 1.75
688 694 4.820897 TCGCGCTATGAATCCTTGATAAT 58.179 39.130 5.56 0.00 0.00 1.28
689 695 4.627035 TCGCGCTATGAATCCTTGATAATG 59.373 41.667 5.56 0.00 0.00 1.90
690 696 4.201753 CGCGCTATGAATCCTTGATAATGG 60.202 45.833 5.56 0.00 0.00 3.16
691 697 4.697352 GCGCTATGAATCCTTGATAATGGT 59.303 41.667 0.00 0.00 0.00 3.55
715 721 1.911766 CCGGGACTGTACCTGTGGT 60.912 63.158 7.61 0.00 40.16 4.16
735 741 4.803426 GAGAGACGGCAGGGCGTG 62.803 72.222 25.60 2.14 0.00 5.34
750 756 2.045926 GTGGCGACCCTCTTGCAT 60.046 61.111 0.00 0.00 0.00 3.96
752 758 2.825836 GGCGACCCTCTTGCATGG 60.826 66.667 0.00 0.00 0.00 3.66
767 773 1.918293 ATGGCACCTCCTCGTTCCA 60.918 57.895 0.00 0.00 33.43 3.53
800 806 2.958355 CCAAGACAAGACATGGGTTTGT 59.042 45.455 10.33 10.33 37.72 2.83
872 893 1.532728 GAGTCCTCGAGCTCCCCTA 59.467 63.158 6.99 0.00 0.00 3.53
898 919 4.093952 GCAGCATTGTGTCGCGCT 62.094 61.111 5.56 0.00 34.29 5.92
1034 1058 2.693591 GGATGGAGGTGTTCACTATCGA 59.306 50.000 2.98 0.00 0.00 3.59
1176 1209 2.208431 GAATGTGATCCCTCGCTTCTG 58.792 52.381 0.00 0.00 32.91 3.02
1328 1361 1.595466 CTAGCCGTCCATCGTCTAGT 58.405 55.000 0.00 0.00 41.36 2.57
1346 1379 2.648059 AGTGCCCAACTATGAATCTGC 58.352 47.619 0.00 0.00 37.36 4.26
1390 1423 1.439644 GAAAGCAACAACCCGCCAA 59.560 52.632 0.00 0.00 0.00 4.52
1427 1460 2.104170 TGTTTTCAACTTCCGGGCTTT 58.896 42.857 0.00 0.00 0.00 3.51
1534 1577 9.638239 GAAATAATTTTCTGGTTTGCATGACTA 57.362 29.630 0.00 0.00 38.56 2.59
1660 1714 5.844004 TCTAGTTAGCTGGCTTATTGCTAC 58.156 41.667 0.00 0.00 38.77 3.58
1768 2491 2.750141 AAGGGCTTGCATGATGAGAT 57.250 45.000 3.33 0.00 0.00 2.75
1795 2518 8.684520 GCTTCAGTTAACTAGGTCACTCTAATA 58.315 37.037 8.04 0.00 0.00 0.98
1808 2533 8.860088 AGGTCACTCTAATAGTTTTTGCAAAAT 58.140 29.630 24.39 13.64 35.76 1.82
1883 2616 4.253685 CACACACTTAATGGAAGATCGGT 58.746 43.478 0.00 0.00 38.65 4.69
1884 2617 4.093408 CACACACTTAATGGAAGATCGGTG 59.907 45.833 0.00 0.00 38.65 4.94
1885 2618 4.253685 CACACTTAATGGAAGATCGGTGT 58.746 43.478 0.00 0.00 38.65 4.16
1889 2622 6.086222 CACTTAATGGAAGATCGGTGTTTTG 58.914 40.000 0.00 0.00 38.65 2.44
1890 2623 3.575965 AATGGAAGATCGGTGTTTTGC 57.424 42.857 0.00 0.00 0.00 3.68
1988 2724 6.683974 ATCCATACGAAGGTCAAATTGAAG 57.316 37.500 0.00 0.00 0.00 3.02
2002 2738 5.530171 TCAAATTGAAGAGGAGCTCATATGC 59.470 40.000 17.19 4.76 32.06 3.14
2249 3013 9.851686 ATTGATTCTATTATAAGTGAACTGCCA 57.148 29.630 5.44 1.46 0.00 4.92
2296 3060 1.615384 GGCCAGCCAAAGTGAGAATCT 60.615 52.381 3.12 0.00 33.63 2.40
2297 3061 1.471684 GCCAGCCAAAGTGAGAATCTG 59.528 52.381 0.00 0.00 34.92 2.90
2357 3121 5.451908 CGCACTCACTTGACATTTTTACAT 58.548 37.500 0.00 0.00 0.00 2.29
2379 3143 7.238710 ACATATTTTTACCACCTCTCAAACCT 58.761 34.615 0.00 0.00 0.00 3.50
2385 3149 4.184649 ACCACCTCTCAAACCTTTCATT 57.815 40.909 0.00 0.00 0.00 2.57
2398 3170 2.486191 CCTTTCATTCCTCTCATCCCCG 60.486 54.545 0.00 0.00 0.00 5.73
2418 3190 2.738743 GCCCTCATTTTTCCCATCTGA 58.261 47.619 0.00 0.00 0.00 3.27
2466 3238 4.489771 GCCGGCACCCATAGCAGT 62.490 66.667 24.80 0.00 0.00 4.40
2504 3276 0.951040 CCTCTCCGACCTTTGTGCAC 60.951 60.000 10.75 10.75 0.00 4.57
2517 3289 0.915872 TGTGCACCATCCTCCCTGAT 60.916 55.000 15.69 0.00 0.00 2.90
2534 3306 2.615227 GATGGAACCTCATGCGCCCT 62.615 60.000 4.18 0.00 0.00 5.19
2610 3385 1.884235 CCCTCAATATGCTCCGTTCC 58.116 55.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.362401 GCAGAAAACAAGGACATGTGATCTTAT 60.362 37.037 1.15 0.00 32.81 1.73
64 65 6.072508 GCAGAAAACAAGGACATGTGATCTTA 60.073 38.462 1.15 0.00 32.81 2.10
122 123 6.640907 CGTTTTAAAACAAAAGGATCTCCCTG 59.359 38.462 26.24 4.89 40.77 4.45
145 146 4.309950 GTTGGTGGCCGTCTCCGT 62.310 66.667 0.00 0.00 0.00 4.69
147 148 4.717313 GGGTTGGTGGCCGTCTCC 62.717 72.222 0.00 0.00 0.00 3.71
174 180 8.733458 CAGTAATTGGATCACTGAATCTTTTCA 58.267 33.333 4.52 0.00 41.80 2.69
176 182 7.177216 TGCAGTAATTGGATCACTGAATCTTTT 59.823 33.333 12.90 0.00 41.80 2.27
209 215 9.029243 GTTATCTATGATCTCTCGGCATTATTG 57.971 37.037 0.00 0.00 0.00 1.90
249 255 5.162075 GTTGATACTGTGCTACGACTTTCT 58.838 41.667 0.00 0.00 0.00 2.52
250 256 4.030306 CGTTGATACTGTGCTACGACTTTC 59.970 45.833 11.59 0.00 35.78 2.62
251 257 3.918591 CGTTGATACTGTGCTACGACTTT 59.081 43.478 11.59 0.00 35.78 2.66
253 259 2.159421 CCGTTGATACTGTGCTACGACT 60.159 50.000 16.12 0.00 35.78 4.18
254 260 2.159476 TCCGTTGATACTGTGCTACGAC 60.159 50.000 16.12 4.36 35.78 4.34
255 261 2.086094 TCCGTTGATACTGTGCTACGA 58.914 47.619 16.12 5.13 35.78 3.43
256 262 2.451132 CTCCGTTGATACTGTGCTACG 58.549 52.381 10.58 10.58 34.06 3.51
257 263 2.159226 AGCTCCGTTGATACTGTGCTAC 60.159 50.000 0.00 0.00 36.83 3.58
258 264 2.099263 GAGCTCCGTTGATACTGTGCTA 59.901 50.000 0.87 0.00 38.09 3.49
259 265 0.898320 AGCTCCGTTGATACTGTGCT 59.102 50.000 0.00 0.00 34.76 4.40
260 266 1.281899 GAGCTCCGTTGATACTGTGC 58.718 55.000 0.87 0.00 0.00 4.57
261 267 1.478510 AGGAGCTCCGTTGATACTGTG 59.521 52.381 26.95 0.00 42.08 3.66
262 268 1.478510 CAGGAGCTCCGTTGATACTGT 59.521 52.381 26.95 2.23 42.08 3.55
263 269 1.751351 TCAGGAGCTCCGTTGATACTG 59.249 52.381 26.95 16.63 42.08 2.74
264 270 2.028130 CTCAGGAGCTCCGTTGATACT 58.972 52.381 26.95 3.86 42.08 2.12
265 271 1.751924 ACTCAGGAGCTCCGTTGATAC 59.248 52.381 26.95 0.25 42.08 2.24
266 272 2.145397 ACTCAGGAGCTCCGTTGATA 57.855 50.000 26.95 9.04 42.08 2.15
267 273 1.751924 GTACTCAGGAGCTCCGTTGAT 59.248 52.381 26.95 16.41 42.08 2.57
268 274 1.174783 GTACTCAGGAGCTCCGTTGA 58.825 55.000 26.95 23.22 42.08 3.18
269 275 0.888619 TGTACTCAGGAGCTCCGTTG 59.111 55.000 26.95 20.29 42.08 4.10
270 276 1.546476 CTTGTACTCAGGAGCTCCGTT 59.454 52.381 26.95 14.45 42.08 4.44
271 277 1.178276 CTTGTACTCAGGAGCTCCGT 58.822 55.000 26.95 20.41 42.08 4.69
272 278 1.403679 CTCTTGTACTCAGGAGCTCCG 59.596 57.143 26.95 20.71 40.04 4.63
273 279 2.729194 TCTCTTGTACTCAGGAGCTCC 58.271 52.381 26.22 26.22 44.17 4.70
274 280 6.040391 ACATTATCTCTTGTACTCAGGAGCTC 59.960 42.308 4.71 4.71 44.17 4.09
275 281 5.896678 ACATTATCTCTTGTACTCAGGAGCT 59.103 40.000 0.00 0.00 44.17 4.09
276 282 6.155475 ACATTATCTCTTGTACTCAGGAGC 57.845 41.667 0.00 0.00 44.17 4.70
277 283 8.458573 ACTACATTATCTCTTGTACTCAGGAG 57.541 38.462 0.00 0.00 45.32 3.69
278 284 8.824756 AACTACATTATCTCTTGTACTCAGGA 57.175 34.615 0.00 0.00 0.00 3.86
279 285 7.858382 CGAACTACATTATCTCTTGTACTCAGG 59.142 40.741 0.00 0.00 0.00 3.86
280 286 7.377397 GCGAACTACATTATCTCTTGTACTCAG 59.623 40.741 0.00 0.00 0.00 3.35
281 287 7.194278 GCGAACTACATTATCTCTTGTACTCA 58.806 38.462 0.00 0.00 0.00 3.41
282 288 6.637658 GGCGAACTACATTATCTCTTGTACTC 59.362 42.308 0.00 0.00 0.00 2.59
283 289 6.505272 GGCGAACTACATTATCTCTTGTACT 58.495 40.000 0.00 0.00 0.00 2.73
284 290 5.398711 CGGCGAACTACATTATCTCTTGTAC 59.601 44.000 0.00 0.00 0.00 2.90
285 291 5.516996 CGGCGAACTACATTATCTCTTGTA 58.483 41.667 0.00 0.00 0.00 2.41
286 292 4.360563 CGGCGAACTACATTATCTCTTGT 58.639 43.478 0.00 0.00 0.00 3.16
287 293 3.182572 GCGGCGAACTACATTATCTCTTG 59.817 47.826 12.98 0.00 0.00 3.02
288 294 3.381949 GCGGCGAACTACATTATCTCTT 58.618 45.455 12.98 0.00 0.00 2.85
289 295 2.604855 CGCGGCGAACTACATTATCTCT 60.605 50.000 19.16 0.00 0.00 3.10
290 296 1.714460 CGCGGCGAACTACATTATCTC 59.286 52.381 19.16 0.00 0.00 2.75
291 297 1.066605 ACGCGGCGAACTACATTATCT 59.933 47.619 30.94 0.00 0.00 1.98
292 298 1.450905 GACGCGGCGAACTACATTATC 59.549 52.381 30.94 8.00 0.00 1.75
293 299 1.484356 GACGCGGCGAACTACATTAT 58.516 50.000 30.94 1.17 0.00 1.28
294 300 0.526096 GGACGCGGCGAACTACATTA 60.526 55.000 30.94 0.00 0.00 1.90
295 301 1.808390 GGACGCGGCGAACTACATT 60.808 57.895 30.94 2.93 0.00 2.71
296 302 2.202703 GGACGCGGCGAACTACAT 60.203 61.111 30.94 3.83 0.00 2.29
297 303 3.332493 GAGGACGCGGCGAACTACA 62.332 63.158 30.94 0.00 0.00 2.74
298 304 2.578981 GAGGACGCGGCGAACTAC 60.579 66.667 30.94 7.59 0.00 2.73
299 305 2.749044 AGAGGACGCGGCGAACTA 60.749 61.111 30.94 0.00 0.00 2.24
300 306 4.117661 GAGAGGACGCGGCGAACT 62.118 66.667 30.94 24.35 0.00 3.01
301 307 4.415332 TGAGAGGACGCGGCGAAC 62.415 66.667 30.94 20.03 0.00 3.95
302 308 4.415332 GTGAGAGGACGCGGCGAA 62.415 66.667 30.94 2.20 0.00 4.70
306 312 4.477975 GGTCGTGAGAGGACGCGG 62.478 72.222 12.47 0.00 43.49 6.46
307 313 2.742710 TTTGGTCGTGAGAGGACGCG 62.743 60.000 3.53 3.53 43.49 6.01
308 314 1.006571 TTTGGTCGTGAGAGGACGC 60.007 57.895 0.00 0.00 43.49 5.19
309 315 0.314302 AGTTTGGTCGTGAGAGGACG 59.686 55.000 0.00 0.00 43.49 4.79
310 316 1.340248 TCAGTTTGGTCGTGAGAGGAC 59.660 52.381 0.00 0.00 43.49 3.85
311 317 1.699730 TCAGTTTGGTCGTGAGAGGA 58.300 50.000 0.00 0.00 43.49 3.71
312 318 2.751166 ATCAGTTTGGTCGTGAGAGG 57.249 50.000 0.00 0.00 43.49 3.69
313 319 4.058124 TCAAATCAGTTTGGTCGTGAGAG 58.942 43.478 1.55 0.00 43.85 3.20
314 320 4.058124 CTCAAATCAGTTTGGTCGTGAGA 58.942 43.478 1.55 0.00 43.85 3.27
315 321 3.364366 GCTCAAATCAGTTTGGTCGTGAG 60.364 47.826 1.55 0.00 43.85 3.51
316 322 2.548057 GCTCAAATCAGTTTGGTCGTGA 59.452 45.455 1.55 0.00 43.85 4.35
317 323 2.549754 AGCTCAAATCAGTTTGGTCGTG 59.450 45.455 1.55 0.00 43.85 4.35
318 324 2.549754 CAGCTCAAATCAGTTTGGTCGT 59.450 45.455 1.55 0.00 43.85 4.34
319 325 2.666619 GCAGCTCAAATCAGTTTGGTCG 60.667 50.000 1.55 0.00 43.85 4.79
320 326 2.555757 AGCAGCTCAAATCAGTTTGGTC 59.444 45.455 0.00 0.00 43.85 4.02
321 327 2.295349 CAGCAGCTCAAATCAGTTTGGT 59.705 45.455 0.00 0.00 43.85 3.67
322 328 2.295349 ACAGCAGCTCAAATCAGTTTGG 59.705 45.455 0.00 0.00 43.85 3.28
323 329 3.637998 ACAGCAGCTCAAATCAGTTTG 57.362 42.857 0.00 0.00 44.81 2.93
324 330 4.365723 CAAACAGCAGCTCAAATCAGTTT 58.634 39.130 0.00 0.00 0.00 2.66
325 331 3.243636 CCAAACAGCAGCTCAAATCAGTT 60.244 43.478 0.00 0.00 0.00 3.16
326 332 2.295349 CCAAACAGCAGCTCAAATCAGT 59.705 45.455 0.00 0.00 0.00 3.41
327 333 2.352421 CCCAAACAGCAGCTCAAATCAG 60.352 50.000 0.00 0.00 0.00 2.90
328 334 1.614903 CCCAAACAGCAGCTCAAATCA 59.385 47.619 0.00 0.00 0.00 2.57
329 335 1.615392 ACCCAAACAGCAGCTCAAATC 59.385 47.619 0.00 0.00 0.00 2.17
330 336 1.342174 CACCCAAACAGCAGCTCAAAT 59.658 47.619 0.00 0.00 0.00 2.32
331 337 0.746063 CACCCAAACAGCAGCTCAAA 59.254 50.000 0.00 0.00 0.00 2.69
332 338 0.106769 TCACCCAAACAGCAGCTCAA 60.107 50.000 0.00 0.00 0.00 3.02
333 339 0.111061 ATCACCCAAACAGCAGCTCA 59.889 50.000 0.00 0.00 0.00 4.26
334 340 1.200948 GAATCACCCAAACAGCAGCTC 59.799 52.381 0.00 0.00 0.00 4.09
335 341 1.251251 GAATCACCCAAACAGCAGCT 58.749 50.000 0.00 0.00 0.00 4.24
336 342 0.244721 GGAATCACCCAAACAGCAGC 59.755 55.000 0.00 0.00 0.00 5.25
337 343 1.619654 TGGAATCACCCAAACAGCAG 58.380 50.000 0.00 0.00 38.00 4.24
338 344 1.894466 CATGGAATCACCCAAACAGCA 59.106 47.619 0.00 0.00 40.04 4.41
339 345 2.165030 CTCATGGAATCACCCAAACAGC 59.835 50.000 0.00 0.00 40.04 4.40
340 346 3.424703 ACTCATGGAATCACCCAAACAG 58.575 45.455 0.00 0.00 40.04 3.16
341 347 3.524095 ACTCATGGAATCACCCAAACA 57.476 42.857 0.00 0.00 40.04 2.83
342 348 5.975693 TTAACTCATGGAATCACCCAAAC 57.024 39.130 0.00 0.00 40.04 2.93
343 349 7.310361 GGAAATTAACTCATGGAATCACCCAAA 60.310 37.037 0.00 0.00 40.04 3.28
344 350 6.154363 GGAAATTAACTCATGGAATCACCCAA 59.846 38.462 0.00 0.00 40.04 4.12
345 351 5.656416 GGAAATTAACTCATGGAATCACCCA 59.344 40.000 0.00 0.00 41.05 4.51
346 352 5.656416 TGGAAATTAACTCATGGAATCACCC 59.344 40.000 0.00 0.00 38.00 4.61
347 353 6.773976 TGGAAATTAACTCATGGAATCACC 57.226 37.500 0.00 0.00 39.54 4.02
348 354 7.134815 CGATGGAAATTAACTCATGGAATCAC 58.865 38.462 0.00 0.00 0.00 3.06
349 355 6.828273 ACGATGGAAATTAACTCATGGAATCA 59.172 34.615 0.00 0.00 0.00 2.57
350 356 7.264373 ACGATGGAAATTAACTCATGGAATC 57.736 36.000 0.00 0.00 0.00 2.52
351 357 7.339212 TGAACGATGGAAATTAACTCATGGAAT 59.661 33.333 0.00 0.00 0.00 3.01
352 358 6.657117 TGAACGATGGAAATTAACTCATGGAA 59.343 34.615 0.00 0.00 0.00 3.53
353 359 6.176896 TGAACGATGGAAATTAACTCATGGA 58.823 36.000 0.00 0.00 0.00 3.41
354 360 6.435430 TGAACGATGGAAATTAACTCATGG 57.565 37.500 0.00 0.00 0.00 3.66
355 361 8.070171 GGTATGAACGATGGAAATTAACTCATG 58.930 37.037 0.00 0.00 0.00 3.07
356 362 7.773224 TGGTATGAACGATGGAAATTAACTCAT 59.227 33.333 0.00 0.00 0.00 2.90
357 363 7.065324 GTGGTATGAACGATGGAAATTAACTCA 59.935 37.037 0.00 0.00 0.00 3.41
358 364 7.065324 TGTGGTATGAACGATGGAAATTAACTC 59.935 37.037 0.00 0.00 0.00 3.01
359 365 6.882140 TGTGGTATGAACGATGGAAATTAACT 59.118 34.615 0.00 0.00 0.00 2.24
360 366 7.079182 TGTGGTATGAACGATGGAAATTAAC 57.921 36.000 0.00 0.00 0.00 2.01
361 367 6.317642 CCTGTGGTATGAACGATGGAAATTAA 59.682 38.462 0.00 0.00 0.00 1.40
362 368 5.820423 CCTGTGGTATGAACGATGGAAATTA 59.180 40.000 0.00 0.00 0.00 1.40
363 369 4.640201 CCTGTGGTATGAACGATGGAAATT 59.360 41.667 0.00 0.00 0.00 1.82
364 370 4.199310 CCTGTGGTATGAACGATGGAAAT 58.801 43.478 0.00 0.00 0.00 2.17
365 371 3.605634 CCTGTGGTATGAACGATGGAAA 58.394 45.455 0.00 0.00 0.00 3.13
366 372 2.679639 GCCTGTGGTATGAACGATGGAA 60.680 50.000 0.00 0.00 0.00 3.53
367 373 1.134521 GCCTGTGGTATGAACGATGGA 60.135 52.381 0.00 0.00 0.00 3.41
368 374 1.299541 GCCTGTGGTATGAACGATGG 58.700 55.000 0.00 0.00 0.00 3.51
369 375 1.665679 GTGCCTGTGGTATGAACGATG 59.334 52.381 0.00 0.00 0.00 3.84
370 376 1.406887 GGTGCCTGTGGTATGAACGAT 60.407 52.381 0.00 0.00 0.00 3.73
371 377 0.036765 GGTGCCTGTGGTATGAACGA 60.037 55.000 0.00 0.00 0.00 3.85
372 378 0.321210 TGGTGCCTGTGGTATGAACG 60.321 55.000 0.00 0.00 0.00 3.95
373 379 1.745087 CATGGTGCCTGTGGTATGAAC 59.255 52.381 0.00 0.00 0.00 3.18
374 380 1.954733 GCATGGTGCCTGTGGTATGAA 60.955 52.381 0.00 0.00 37.42 2.57
375 381 0.394216 GCATGGTGCCTGTGGTATGA 60.394 55.000 0.00 0.00 37.42 2.15
376 382 0.394762 AGCATGGTGCCTGTGGTATG 60.395 55.000 0.00 0.00 46.52 2.39
377 383 1.134098 GTAGCATGGTGCCTGTGGTAT 60.134 52.381 7.89 0.00 46.52 2.73
378 384 0.251916 GTAGCATGGTGCCTGTGGTA 59.748 55.000 7.89 3.34 46.52 3.25
379 385 1.002134 GTAGCATGGTGCCTGTGGT 60.002 57.895 7.89 4.82 46.52 4.16
380 386 1.002257 TGTAGCATGGTGCCTGTGG 60.002 57.895 7.89 0.00 46.52 4.17
381 387 0.321919 ACTGTAGCATGGTGCCTGTG 60.322 55.000 7.89 0.00 46.52 3.66
382 388 0.036010 GACTGTAGCATGGTGCCTGT 60.036 55.000 7.89 7.99 46.52 4.00
383 389 1.086067 CGACTGTAGCATGGTGCCTG 61.086 60.000 7.89 4.70 46.52 4.85
384 390 1.219124 CGACTGTAGCATGGTGCCT 59.781 57.895 7.89 0.00 46.52 4.75
385 391 2.464459 GCGACTGTAGCATGGTGCC 61.464 63.158 7.89 0.00 46.52 5.01
386 392 0.179111 TAGCGACTGTAGCATGGTGC 60.179 55.000 15.17 6.89 45.46 5.01
387 393 1.135112 TGTAGCGACTGTAGCATGGTG 60.135 52.381 15.17 0.00 37.01 4.17
388 394 1.135139 CTGTAGCGACTGTAGCATGGT 59.865 52.381 15.17 1.62 37.01 3.55
389 395 1.135139 ACTGTAGCGACTGTAGCATGG 59.865 52.381 15.17 4.99 36.10 3.66
390 396 2.568696 ACTGTAGCGACTGTAGCATG 57.431 50.000 15.17 4.68 36.10 4.06
391 397 3.193691 AGAAACTGTAGCGACTGTAGCAT 59.806 43.478 15.17 3.36 36.79 3.79
392 398 2.557056 AGAAACTGTAGCGACTGTAGCA 59.443 45.455 15.17 0.00 36.79 3.49
393 399 3.172824 GAGAAACTGTAGCGACTGTAGC 58.827 50.000 9.75 4.63 36.79 3.58
394 400 3.120269 ACGAGAAACTGTAGCGACTGTAG 60.120 47.826 9.75 0.00 36.79 2.74
395 401 2.810274 ACGAGAAACTGTAGCGACTGTA 59.190 45.455 9.75 0.00 36.79 2.74
396 402 1.607628 ACGAGAAACTGTAGCGACTGT 59.392 47.619 3.67 3.67 39.23 3.55
397 403 2.333389 ACGAGAAACTGTAGCGACTG 57.667 50.000 2.34 2.34 0.00 3.51
398 404 4.698583 ATTACGAGAAACTGTAGCGACT 57.301 40.909 0.00 0.00 0.00 4.18
399 405 5.444218 CCAAATTACGAGAAACTGTAGCGAC 60.444 44.000 0.00 0.00 0.00 5.19
400 406 4.624024 CCAAATTACGAGAAACTGTAGCGA 59.376 41.667 0.00 0.00 0.00 4.93
401 407 4.624024 TCCAAATTACGAGAAACTGTAGCG 59.376 41.667 0.00 0.00 0.00 4.26
402 408 6.402226 CCTTCCAAATTACGAGAAACTGTAGC 60.402 42.308 0.00 0.00 0.00 3.58
403 409 6.402226 GCCTTCCAAATTACGAGAAACTGTAG 60.402 42.308 0.00 0.00 0.00 2.74
404 410 5.410439 GCCTTCCAAATTACGAGAAACTGTA 59.590 40.000 0.00 0.00 0.00 2.74
405 411 4.215613 GCCTTCCAAATTACGAGAAACTGT 59.784 41.667 0.00 0.00 0.00 3.55
406 412 4.379499 GGCCTTCCAAATTACGAGAAACTG 60.379 45.833 0.00 0.00 0.00 3.16
407 413 3.756963 GGCCTTCCAAATTACGAGAAACT 59.243 43.478 0.00 0.00 0.00 2.66
408 414 3.119602 GGGCCTTCCAAATTACGAGAAAC 60.120 47.826 0.84 0.00 35.00 2.78
409 415 3.086282 GGGCCTTCCAAATTACGAGAAA 58.914 45.455 0.84 0.00 35.00 2.52
410 416 2.040545 TGGGCCTTCCAAATTACGAGAA 59.959 45.455 4.53 0.00 43.84 2.87
411 417 1.631388 TGGGCCTTCCAAATTACGAGA 59.369 47.619 4.53 0.00 43.84 4.04
412 418 2.122783 TGGGCCTTCCAAATTACGAG 57.877 50.000 4.53 0.00 43.84 4.18
420 426 9.670252 ATGAAGTTCATATCTTGGGCCTTCCAA 62.670 40.741 16.85 0.00 43.27 3.53
421 427 2.852449 AGTTCATATCTTGGGCCTTCCA 59.148 45.455 4.53 0.00 45.43 3.53
422 428 3.584733 AGTTCATATCTTGGGCCTTCC 57.415 47.619 4.53 0.00 0.00 3.46
423 429 4.526970 TGAAGTTCATATCTTGGGCCTTC 58.473 43.478 4.53 0.00 0.00 3.46
424 430 4.591321 TGAAGTTCATATCTTGGGCCTT 57.409 40.909 4.53 0.00 0.00 4.35
425 431 4.166725 TCATGAAGTTCATATCTTGGGCCT 59.833 41.667 17.86 0.00 34.28 5.19
426 432 4.464008 TCATGAAGTTCATATCTTGGGCC 58.536 43.478 17.86 0.00 34.28 5.80
427 433 6.489361 AGAATCATGAAGTTCATATCTTGGGC 59.511 38.462 17.86 3.53 34.28 5.36
428 434 8.461249 AAGAATCATGAAGTTCATATCTTGGG 57.539 34.615 25.08 12.49 34.28 4.12
429 435 9.117183 TGAAGAATCATGAAGTTCATATCTTGG 57.883 33.333 27.98 14.84 35.50 3.61
435 441 9.065798 TGTGTTTGAAGAATCATGAAGTTCATA 57.934 29.630 17.86 7.59 34.28 2.15
436 442 7.944061 TGTGTTTGAAGAATCATGAAGTTCAT 58.056 30.769 12.75 12.75 37.65 2.57
437 443 7.332213 TGTGTTTGAAGAATCATGAAGTTCA 57.668 32.000 8.27 8.27 34.96 3.18
438 444 7.701924 TGTTGTGTTTGAAGAATCATGAAGTTC 59.298 33.333 0.00 0.00 34.96 3.01
439 445 7.546358 TGTTGTGTTTGAAGAATCATGAAGTT 58.454 30.769 0.00 0.00 34.96 2.66
440 446 7.099266 TGTTGTGTTTGAAGAATCATGAAGT 57.901 32.000 0.00 0.00 34.96 3.01
441 447 7.703621 ACTTGTTGTGTTTGAAGAATCATGAAG 59.296 33.333 0.00 0.00 34.96 3.02
442 448 7.488792 CACTTGTTGTGTTTGAAGAATCATGAA 59.511 33.333 0.00 0.00 41.53 2.57
443 449 6.974048 CACTTGTTGTGTTTGAAGAATCATGA 59.026 34.615 0.00 0.00 41.53 3.07
444 450 7.157050 CACTTGTTGTGTTTGAAGAATCATG 57.843 36.000 0.00 0.00 41.53 3.07
458 464 8.612619 AGAAGTAATACTTGAACACTTGTTGTG 58.387 33.333 10.76 0.00 44.44 3.33
459 465 8.732746 AGAAGTAATACTTGAACACTTGTTGT 57.267 30.769 10.76 0.00 38.80 3.32
460 466 8.283291 GGAGAAGTAATACTTGAACACTTGTTG 58.717 37.037 10.76 0.00 38.80 3.33
461 467 7.990886 TGGAGAAGTAATACTTGAACACTTGTT 59.009 33.333 10.76 0.00 38.80 2.83
462 468 7.506114 TGGAGAAGTAATACTTGAACACTTGT 58.494 34.615 10.76 0.00 38.80 3.16
463 469 7.360438 GCTGGAGAAGTAATACTTGAACACTTG 60.360 40.741 10.76 0.00 38.80 3.16
464 470 6.651225 GCTGGAGAAGTAATACTTGAACACTT 59.349 38.462 10.76 0.00 38.80 3.16
465 471 6.166982 GCTGGAGAAGTAATACTTGAACACT 58.833 40.000 10.76 0.74 38.80 3.55
466 472 5.351740 GGCTGGAGAAGTAATACTTGAACAC 59.648 44.000 10.76 0.00 38.80 3.32
467 473 5.488341 GGCTGGAGAAGTAATACTTGAACA 58.512 41.667 10.76 5.43 38.80 3.18
468 474 4.876679 GGGCTGGAGAAGTAATACTTGAAC 59.123 45.833 10.76 1.05 38.80 3.18
469 475 4.382685 CGGGCTGGAGAAGTAATACTTGAA 60.383 45.833 10.76 0.00 38.80 2.69
470 476 3.132289 CGGGCTGGAGAAGTAATACTTGA 59.868 47.826 10.76 0.00 38.80 3.02
471 477 3.458189 CGGGCTGGAGAAGTAATACTTG 58.542 50.000 10.76 0.00 38.80 3.16
472 478 2.434702 CCGGGCTGGAGAAGTAATACTT 59.565 50.000 6.48 5.20 40.08 2.24
473 479 2.040178 CCGGGCTGGAGAAGTAATACT 58.960 52.381 6.48 0.00 42.00 2.12
474 480 1.761198 ACCGGGCTGGAGAAGTAATAC 59.239 52.381 21.81 0.00 42.00 1.89
475 481 2.037144 GACCGGGCTGGAGAAGTAATA 58.963 52.381 21.81 0.00 42.00 0.98
476 482 0.831307 GACCGGGCTGGAGAAGTAAT 59.169 55.000 21.81 0.00 42.00 1.89
477 483 1.262640 GGACCGGGCTGGAGAAGTAA 61.263 60.000 21.81 0.00 42.00 2.24
478 484 1.684734 GGACCGGGCTGGAGAAGTA 60.685 63.158 21.81 0.00 42.00 2.24
479 485 3.003763 GGACCGGGCTGGAGAAGT 61.004 66.667 21.81 0.00 42.00 3.01
480 486 3.003173 TGGACCGGGCTGGAGAAG 61.003 66.667 21.81 0.00 42.00 2.85
481 487 3.319198 GTGGACCGGGCTGGAGAA 61.319 66.667 21.81 0.00 42.00 2.87
493 499 4.489771 CAGGGCATCGGGGTGGAC 62.490 72.222 0.00 0.00 0.00 4.02
495 501 3.583882 AAACAGGGCATCGGGGTGG 62.584 63.158 0.00 0.00 0.00 4.61
496 502 2.035626 AAACAGGGCATCGGGGTG 59.964 61.111 0.00 0.00 0.00 4.61
497 503 1.863155 ATCAAACAGGGCATCGGGGT 61.863 55.000 0.00 0.00 0.00 4.95
498 504 1.076777 ATCAAACAGGGCATCGGGG 60.077 57.895 0.00 0.00 0.00 5.73
499 505 0.394216 TCATCAAACAGGGCATCGGG 60.394 55.000 0.00 0.00 0.00 5.14
500 506 1.683943 ATCATCAAACAGGGCATCGG 58.316 50.000 0.00 0.00 0.00 4.18
501 507 4.067192 TGATATCATCAAACAGGGCATCG 58.933 43.478 0.00 0.00 36.11 3.84
515 521 2.833943 TGCTAGGCGTGGATGATATCAT 59.166 45.455 18.21 18.21 39.70 2.45
516 522 2.232208 CTGCTAGGCGTGGATGATATCA 59.768 50.000 8.10 8.10 0.00 2.15
517 523 2.232452 ACTGCTAGGCGTGGATGATATC 59.768 50.000 0.00 0.00 0.00 1.63
518 524 2.251818 ACTGCTAGGCGTGGATGATAT 58.748 47.619 0.00 0.00 0.00 1.63
519 525 1.704641 ACTGCTAGGCGTGGATGATA 58.295 50.000 0.00 0.00 0.00 2.15
520 526 0.833287 AACTGCTAGGCGTGGATGAT 59.167 50.000 0.00 0.00 0.00 2.45
521 527 0.613260 AAACTGCTAGGCGTGGATGA 59.387 50.000 0.00 0.00 0.00 2.92
522 528 1.398390 GAAAACTGCTAGGCGTGGATG 59.602 52.381 0.00 0.00 0.00 3.51
523 529 1.003118 TGAAAACTGCTAGGCGTGGAT 59.997 47.619 0.00 0.00 0.00 3.41
524 530 0.394938 TGAAAACTGCTAGGCGTGGA 59.605 50.000 0.00 0.00 0.00 4.02
525 531 0.517316 GTGAAAACTGCTAGGCGTGG 59.483 55.000 0.00 0.00 0.00 4.94
526 532 1.069906 GTGTGAAAACTGCTAGGCGTG 60.070 52.381 0.00 0.00 0.00 5.34
527 533 1.226746 GTGTGAAAACTGCTAGGCGT 58.773 50.000 0.00 0.00 0.00 5.68
528 534 1.225855 TGTGTGAAAACTGCTAGGCG 58.774 50.000 0.00 0.00 0.00 5.52
529 535 2.162408 GGATGTGTGAAAACTGCTAGGC 59.838 50.000 0.00 0.00 0.00 3.93
530 536 2.416547 CGGATGTGTGAAAACTGCTAGG 59.583 50.000 0.00 0.00 0.00 3.02
531 537 2.159653 GCGGATGTGTGAAAACTGCTAG 60.160 50.000 0.00 0.00 0.00 3.42
532 538 1.804151 GCGGATGTGTGAAAACTGCTA 59.196 47.619 0.00 0.00 0.00 3.49
533 539 0.593128 GCGGATGTGTGAAAACTGCT 59.407 50.000 0.00 0.00 0.00 4.24
534 540 0.310543 TGCGGATGTGTGAAAACTGC 59.689 50.000 0.00 0.00 0.00 4.40
535 541 2.033299 AGTTGCGGATGTGTGAAAACTG 59.967 45.455 0.00 0.00 0.00 3.16
536 542 2.297701 AGTTGCGGATGTGTGAAAACT 58.702 42.857 0.00 0.00 0.00 2.66
537 543 2.774439 AGTTGCGGATGTGTGAAAAC 57.226 45.000 0.00 0.00 0.00 2.43
538 544 2.225491 GCTAGTTGCGGATGTGTGAAAA 59.775 45.455 0.00 0.00 0.00 2.29
539 545 1.804151 GCTAGTTGCGGATGTGTGAAA 59.196 47.619 0.00 0.00 0.00 2.69
540 546 1.438651 GCTAGTTGCGGATGTGTGAA 58.561 50.000 0.00 0.00 0.00 3.18
541 547 3.137484 GCTAGTTGCGGATGTGTGA 57.863 52.632 0.00 0.00 0.00 3.58
552 558 5.042593 TGTTGTTTGAATGCAAGCTAGTTG 58.957 37.500 1.61 0.00 36.35 3.16
553 559 5.261209 TGTTGTTTGAATGCAAGCTAGTT 57.739 34.783 1.61 0.00 36.35 2.24
554 560 4.916983 TGTTGTTTGAATGCAAGCTAGT 57.083 36.364 1.61 0.00 36.35 2.57
555 561 6.201425 ACATTTGTTGTTTGAATGCAAGCTAG 59.799 34.615 1.61 0.00 33.74 3.42
556 562 6.047870 ACATTTGTTGTTTGAATGCAAGCTA 58.952 32.000 1.61 0.00 33.74 3.32
557 563 4.877251 ACATTTGTTGTTTGAATGCAAGCT 59.123 33.333 1.61 0.00 33.74 3.74
558 564 5.159399 ACATTTGTTGTTTGAATGCAAGC 57.841 34.783 0.00 0.00 33.74 4.01
572 578 4.142049 ACCGGACAACATCAAACATTTGTT 60.142 37.500 9.46 0.00 40.50 2.83
573 579 3.383185 ACCGGACAACATCAAACATTTGT 59.617 39.130 9.46 0.00 39.18 2.83
574 580 3.976169 ACCGGACAACATCAAACATTTG 58.024 40.909 9.46 0.00 39.48 2.32
575 581 3.005367 GGACCGGACAACATCAAACATTT 59.995 43.478 9.46 0.00 0.00 2.32
576 582 2.556622 GGACCGGACAACATCAAACATT 59.443 45.455 9.46 0.00 0.00 2.71
577 583 2.159382 GGACCGGACAACATCAAACAT 58.841 47.619 9.46 0.00 0.00 2.71
578 584 1.134068 TGGACCGGACAACATCAAACA 60.134 47.619 9.46 0.00 0.00 2.83
579 585 1.600023 TGGACCGGACAACATCAAAC 58.400 50.000 9.46 0.00 0.00 2.93
580 586 2.350057 TTGGACCGGACAACATCAAA 57.650 45.000 9.46 0.00 0.00 2.69
581 587 2.226330 CTTTGGACCGGACAACATCAA 58.774 47.619 9.46 0.00 0.00 2.57
582 588 1.142060 ACTTTGGACCGGACAACATCA 59.858 47.619 9.46 0.00 0.00 3.07
583 589 1.892209 ACTTTGGACCGGACAACATC 58.108 50.000 9.46 0.00 0.00 3.06
584 590 1.953686 CAACTTTGGACCGGACAACAT 59.046 47.619 9.46 0.70 0.00 2.71
585 591 1.384525 CAACTTTGGACCGGACAACA 58.615 50.000 9.46 0.00 0.00 3.33
586 592 0.030235 GCAACTTTGGACCGGACAAC 59.970 55.000 9.46 0.00 0.00 3.32
587 593 0.394488 TGCAACTTTGGACCGGACAA 60.394 50.000 9.46 10.68 0.00 3.18
588 594 0.179004 ATGCAACTTTGGACCGGACA 60.179 50.000 9.46 3.42 0.00 4.02
589 595 0.240945 CATGCAACTTTGGACCGGAC 59.759 55.000 9.46 0.00 0.00 4.79
590 596 0.109532 TCATGCAACTTTGGACCGGA 59.890 50.000 9.46 0.00 0.00 5.14
591 597 1.135315 CATCATGCAACTTTGGACCGG 60.135 52.381 0.00 0.00 0.00 5.28
592 598 1.135315 CCATCATGCAACTTTGGACCG 60.135 52.381 0.00 0.00 0.00 4.79
593 599 1.205417 CCCATCATGCAACTTTGGACC 59.795 52.381 9.24 0.00 0.00 4.46
594 600 1.404583 GCCCATCATGCAACTTTGGAC 60.405 52.381 9.24 0.00 0.00 4.02
595 601 0.896923 GCCCATCATGCAACTTTGGA 59.103 50.000 9.24 0.00 0.00 3.53
596 602 0.609151 TGCCCATCATGCAACTTTGG 59.391 50.000 0.00 0.00 35.40 3.28
597 603 2.459060 TTGCCCATCATGCAACTTTG 57.541 45.000 0.00 0.00 43.36 2.77
602 608 0.609151 CCAAGTTGCCCATCATGCAA 59.391 50.000 0.00 0.00 45.83 4.08
603 609 0.251698 TCCAAGTTGCCCATCATGCA 60.252 50.000 0.00 0.00 36.84 3.96
604 610 1.117150 ATCCAAGTTGCCCATCATGC 58.883 50.000 0.00 0.00 0.00 4.06
605 611 5.303589 AGATTAATCCAAGTTGCCCATCATG 59.696 40.000 11.92 0.00 0.00 3.07
606 612 5.461327 AGATTAATCCAAGTTGCCCATCAT 58.539 37.500 11.92 0.00 0.00 2.45
607 613 4.870636 AGATTAATCCAAGTTGCCCATCA 58.129 39.130 11.92 0.00 0.00 3.07
608 614 5.859205 AAGATTAATCCAAGTTGCCCATC 57.141 39.130 11.92 0.00 0.00 3.51
609 615 7.919385 ATAAAGATTAATCCAAGTTGCCCAT 57.081 32.000 11.92 0.00 0.00 4.00
610 616 8.859090 CATATAAAGATTAATCCAAGTTGCCCA 58.141 33.333 11.92 0.00 0.00 5.36
611 617 7.814587 GCATATAAAGATTAATCCAAGTTGCCC 59.185 37.037 11.92 0.00 0.00 5.36
612 618 8.579863 AGCATATAAAGATTAATCCAAGTTGCC 58.420 33.333 11.92 0.00 0.00 4.52
613 619 9.971922 AAGCATATAAAGATTAATCCAAGTTGC 57.028 29.630 11.92 13.37 0.00 4.17
636 642 7.995998 CTTGCAGATCAATCCTTGCTAATAAGC 60.996 40.741 0.00 0.00 40.61 3.09
637 643 6.872628 TGCAGATCAATCCTTGCTAATAAG 57.127 37.500 0.00 0.00 0.00 1.73
638 644 6.263842 CCTTGCAGATCAATCCTTGCTAATAA 59.736 38.462 0.00 0.00 33.57 1.40
639 645 5.766670 CCTTGCAGATCAATCCTTGCTAATA 59.233 40.000 0.00 0.00 33.57 0.98
640 646 4.583489 CCTTGCAGATCAATCCTTGCTAAT 59.417 41.667 0.00 0.00 33.57 1.73
641 647 3.949754 CCTTGCAGATCAATCCTTGCTAA 59.050 43.478 0.00 0.00 33.57 3.09
642 648 3.548770 CCTTGCAGATCAATCCTTGCTA 58.451 45.455 0.00 0.00 33.57 3.49
643 649 2.376109 CCTTGCAGATCAATCCTTGCT 58.624 47.619 0.00 0.00 33.57 3.91
644 650 1.407979 CCCTTGCAGATCAATCCTTGC 59.592 52.381 0.00 0.00 33.57 4.01
645 651 3.008835 TCCCTTGCAGATCAATCCTTG 57.991 47.619 0.00 0.00 33.57 3.61
646 652 3.746751 CGATCCCTTGCAGATCAATCCTT 60.747 47.826 13.15 0.00 40.17 3.36
647 653 2.224475 CGATCCCTTGCAGATCAATCCT 60.224 50.000 13.15 0.00 40.17 3.24
648 654 2.149578 CGATCCCTTGCAGATCAATCC 58.850 52.381 13.15 0.00 40.17 3.01
649 655 1.534595 GCGATCCCTTGCAGATCAATC 59.465 52.381 13.15 2.74 40.17 2.67
650 656 1.602311 GCGATCCCTTGCAGATCAAT 58.398 50.000 13.15 0.00 40.17 2.57
651 657 0.811219 CGCGATCCCTTGCAGATCAA 60.811 55.000 0.00 0.00 40.17 2.57
652 658 1.227350 CGCGATCCCTTGCAGATCA 60.227 57.895 0.00 0.00 40.17 2.92
653 659 2.602322 GCGCGATCCCTTGCAGATC 61.602 63.158 12.10 4.70 37.39 2.75
654 660 1.748329 TAGCGCGATCCCTTGCAGAT 61.748 55.000 12.10 0.00 0.00 2.90
655 661 1.748329 ATAGCGCGATCCCTTGCAGA 61.748 55.000 12.10 0.00 0.00 4.26
656 662 1.301244 ATAGCGCGATCCCTTGCAG 60.301 57.895 12.10 0.00 0.00 4.41
657 663 1.595109 CATAGCGCGATCCCTTGCA 60.595 57.895 12.10 0.00 0.00 4.08
658 664 0.880278 TTCATAGCGCGATCCCTTGC 60.880 55.000 12.10 0.00 0.00 4.01
659 665 1.728971 GATTCATAGCGCGATCCCTTG 59.271 52.381 12.10 0.00 0.00 3.61
660 666 1.338200 GGATTCATAGCGCGATCCCTT 60.338 52.381 12.10 0.00 0.00 3.95
661 667 0.247736 GGATTCATAGCGCGATCCCT 59.752 55.000 12.10 0.00 0.00 4.20
662 668 0.247736 AGGATTCATAGCGCGATCCC 59.752 55.000 12.10 10.96 0.00 3.85
663 669 1.728971 CAAGGATTCATAGCGCGATCC 59.271 52.381 12.10 12.63 0.00 3.36
664 670 2.677199 TCAAGGATTCATAGCGCGATC 58.323 47.619 12.10 1.75 0.00 3.69
665 671 2.820059 TCAAGGATTCATAGCGCGAT 57.180 45.000 12.10 5.99 0.00 4.58
666 672 2.820059 ATCAAGGATTCATAGCGCGA 57.180 45.000 12.10 0.00 0.00 5.87
667 673 4.201753 CCATTATCAAGGATTCATAGCGCG 60.202 45.833 0.00 0.00 0.00 6.86
668 674 4.697352 ACCATTATCAAGGATTCATAGCGC 59.303 41.667 0.00 0.00 0.00 5.92
669 675 5.352569 GGACCATTATCAAGGATTCATAGCG 59.647 44.000 0.00 0.00 0.00 4.26
670 676 6.150140 GTGGACCATTATCAAGGATTCATAGC 59.850 42.308 0.00 0.00 0.00 2.97
671 677 6.656693 GGTGGACCATTATCAAGGATTCATAG 59.343 42.308 0.00 0.00 35.64 2.23
672 678 6.467194 GGGTGGACCATTATCAAGGATTCATA 60.467 42.308 0.00 0.00 39.85 2.15
673 679 5.388654 GGTGGACCATTATCAAGGATTCAT 58.611 41.667 0.00 0.00 35.64 2.57
674 680 4.386312 GGGTGGACCATTATCAAGGATTCA 60.386 45.833 0.00 0.00 39.85 2.57
675 681 4.145052 GGGTGGACCATTATCAAGGATTC 58.855 47.826 0.00 0.00 39.85 2.52
676 682 3.117131 GGGGTGGACCATTATCAAGGATT 60.117 47.826 0.00 0.00 42.91 3.01
677 683 2.447047 GGGGTGGACCATTATCAAGGAT 59.553 50.000 0.00 0.00 42.91 3.24
678 684 1.850345 GGGGTGGACCATTATCAAGGA 59.150 52.381 0.00 0.00 42.91 3.36
679 685 1.476833 CGGGGTGGACCATTATCAAGG 60.477 57.143 0.00 0.00 42.91 3.61
680 686 1.476833 CCGGGGTGGACCATTATCAAG 60.477 57.143 0.00 0.00 42.91 3.02
681 687 0.548989 CCGGGGTGGACCATTATCAA 59.451 55.000 0.00 0.00 42.91 2.57
682 688 1.349542 CCCGGGGTGGACCATTATCA 61.350 60.000 14.71 0.00 42.91 2.15
683 689 1.057851 TCCCGGGGTGGACCATTATC 61.058 60.000 23.50 0.00 42.91 1.75
684 690 1.005023 TCCCGGGGTGGACCATTAT 59.995 57.895 23.50 0.00 42.91 1.28
685 691 2.455415 TCCCGGGGTGGACCATTA 59.545 61.111 23.50 0.00 42.91 1.90
691 697 2.284112 GTACAGTCCCGGGGTGGA 60.284 66.667 23.50 13.14 42.00 4.02
715 721 2.442272 GCCCTGCCGTCTCTCCTA 60.442 66.667 0.00 0.00 0.00 2.94
735 741 2.825836 CCATGCAAGAGGGTCGCC 60.826 66.667 0.00 0.00 0.00 5.54
750 756 2.525629 TGGAACGAGGAGGTGCCA 60.526 61.111 0.00 0.00 43.59 4.92
767 773 2.604686 TCTTGGCCTCCTCTGCGT 60.605 61.111 3.32 0.00 0.00 5.24
872 893 2.044252 CAATGCTGCTGGGGCTCT 60.044 61.111 0.00 0.00 39.59 4.09
881 902 4.093952 AGCGCGACACAATGCTGC 62.094 61.111 12.10 0.00 36.09 5.25
898 919 2.043551 TTGTGCCACCAAGTGCCA 60.044 55.556 0.00 0.00 31.34 4.92
1034 1058 2.159382 CACGCCAGTATTGGTCCTTTT 58.841 47.619 6.10 0.00 46.80 2.27
1149 1173 3.681897 GCGAGGGATCACATTCATACATC 59.318 47.826 0.00 0.00 0.00 3.06
1176 1209 2.222678 CGTCATACTTGCATGATCAGGC 59.777 50.000 24.81 24.81 37.28 4.85
1328 1361 2.239402 TCAGCAGATTCATAGTTGGGCA 59.761 45.455 0.00 0.00 0.00 5.36
1346 1379 6.183309 CATCATTGCACATCCATATCTCAG 57.817 41.667 0.00 0.00 0.00 3.35
1427 1460 5.034797 CGAATGTAGCTATCAGACGAACAA 58.965 41.667 0.00 0.00 0.00 2.83
1519 1562 5.009010 ACTTCAAGTTAGTCATGCAAACCAG 59.991 40.000 0.00 0.00 0.00 4.00
1534 1577 3.511146 TCGGGGTTACGATACTTCAAGTT 59.489 43.478 0.00 0.00 38.06 2.66
1660 1714 3.935203 AGTGATTGTCCTTGCTGATTACG 59.065 43.478 0.00 0.00 0.00 3.18
1768 2491 4.833380 AGAGTGACCTAGTTAACTGAAGCA 59.167 41.667 18.56 8.41 0.00 3.91
1813 2538 5.176958 AGCGTGTGTCTGACAAATAACTTAC 59.823 40.000 12.81 0.00 35.91 2.34
1814 2539 5.294356 AGCGTGTGTCTGACAAATAACTTA 58.706 37.500 12.81 0.00 35.91 2.24
1830 2555 2.284150 TCTTTTCGAACAGAAGCGTGTG 59.716 45.455 11.50 0.00 40.40 3.82
1988 2724 3.273434 TGTTTGTGCATATGAGCTCCTC 58.727 45.455 12.15 0.00 34.99 3.71
2236 3000 6.240894 AGAATCAATTCTGGCAGTTCACTTA 58.759 36.000 15.27 0.00 44.91 2.24
2238 3002 4.660168 AGAATCAATTCTGGCAGTTCACT 58.340 39.130 15.27 2.27 44.91 3.41
2240 3004 8.806429 TTAATAGAATCAATTCTGGCAGTTCA 57.194 30.769 15.27 0.03 46.01 3.18
2243 3007 9.412460 TCATTTAATAGAATCAATTCTGGCAGT 57.588 29.630 15.27 0.00 46.01 4.40
2260 3024 2.948979 CTGGCCCGCAGTTCATTTAATA 59.051 45.455 0.00 0.00 0.00 0.98
2289 3053 5.277250 GGAATCAGCGATTTCACAGATTCTC 60.277 44.000 0.00 0.00 40.50 2.87
2296 3060 1.066502 TCGGGAATCAGCGATTTCACA 60.067 47.619 10.42 0.00 31.89 3.58
2297 3061 1.594862 CTCGGGAATCAGCGATTTCAC 59.405 52.381 10.42 1.11 31.89 3.18
2357 3121 7.780745 TGAAAGGTTTGAGAGGTGGTAAAAATA 59.219 33.333 0.00 0.00 0.00 1.40
2379 3143 1.134098 GCGGGGATGAGAGGAATGAAA 60.134 52.381 0.00 0.00 0.00 2.69
2385 3149 3.758133 GAGGGCGGGGATGAGAGGA 62.758 68.421 0.00 0.00 0.00 3.71
2398 3170 2.738743 TCAGATGGGAAAAATGAGGGC 58.261 47.619 0.00 0.00 0.00 5.19
2418 3190 1.303561 ATGTGTGCCTCGCCACAAT 60.304 52.632 10.52 1.04 46.28 2.71
2461 3233 2.102252 GAGGAATTCAGATCCGACTGCT 59.898 50.000 7.93 0.00 42.03 4.24
2484 3256 2.035442 GCACAAAGGTCGGAGAGGC 61.035 63.158 0.00 0.00 36.95 4.70
2517 3289 3.329542 GAGGGCGCATGAGGTTCCA 62.330 63.158 10.83 0.00 0.00 3.53
2610 3385 0.249238 GTGCAGTAGATCAGGCTCGG 60.249 60.000 0.00 0.00 0.00 4.63
2617 3392 0.817654 CGGTGGAGTGCAGTAGATCA 59.182 55.000 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.