Multiple sequence alignment - TraesCS7D01G007600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G007600 chr7D 100.000 5933 0 0 1 5933 3732264 3726332 0.000000e+00 10957.0
1 TraesCS7D01G007600 chr7D 88.321 2603 272 13 2420 5013 2429640 2432219 0.000000e+00 3094.0
2 TraesCS7D01G007600 chr7D 91.691 2034 154 9 2831 4858 3699766 3701790 0.000000e+00 2806.0
3 TraesCS7D01G007600 chr7D 89.922 1022 100 1 992 2013 3438501 3439519 0.000000e+00 1314.0
4 TraesCS7D01G007600 chr7D 88.107 412 47 2 2422 2832 3699324 3699734 6.910000e-134 488.0
5 TraesCS7D01G007600 chr7D 83.482 224 32 2 5326 5544 3701936 3702159 2.800000e-48 204.0
6 TraesCS7D01G007600 chr7D 88.194 144 16 1 2158 2300 3582880 3583023 2.840000e-38 171.0
7 TraesCS7D01G007600 chr7D 82.286 175 24 7 287 460 76535793 76535961 1.720000e-30 145.0
8 TraesCS7D01G007600 chr7D 90.244 82 7 1 5142 5223 3593957 3594037 8.130000e-19 106.0
9 TraesCS7D01G007600 chr7D 91.429 70 6 0 5144 5213 2432338 2432407 4.890000e-16 97.1
10 TraesCS7D01G007600 chr7D 86.585 82 10 1 5142 5223 3443263 3443343 8.190000e-14 89.8
11 TraesCS7D01G007600 chr7D 94.643 56 3 0 5159 5214 3692267 3692322 2.950000e-13 87.9
12 TraesCS7D01G007600 chr7A 94.762 5040 208 21 1 5013 2555199 2550189 0.000000e+00 7793.0
13 TraesCS7D01G007600 chr7A 95.293 2422 108 3 1606 4023 2850586 2848167 0.000000e+00 3836.0
14 TraesCS7D01G007600 chr7A 91.097 2662 183 29 2421 5055 3002374 2999740 0.000000e+00 3554.0
15 TraesCS7D01G007600 chr7A 96.010 1629 39 7 1 1604 2852298 2850671 0.000000e+00 2625.0
16 TraesCS7D01G007600 chr7A 87.738 1207 118 17 892 2081 3379487 3380680 0.000000e+00 1382.0
17 TraesCS7D01G007600 chr7A 89.716 1021 102 1 993 2013 3004364 3003347 0.000000e+00 1301.0
18 TraesCS7D01G007600 chr7A 88.136 413 47 2 2421 2832 3582923 3583334 1.920000e-134 490.0
19 TraesCS7D01G007600 chr7A 83.663 202 27 4 5349 5544 3585569 3585770 1.020000e-42 185.0
20 TraesCS7D01G007600 chr7A 87.324 142 15 3 5682 5823 13194813 13194951 6.150000e-35 159.0
21 TraesCS7D01G007600 chr7A 80.851 188 31 5 274 461 690703309 690703127 6.200000e-30 143.0
22 TraesCS7D01G007600 chr7A 80.423 189 29 8 274 461 116899070 116899251 2.880000e-28 137.0
23 TraesCS7D01G007600 chr7A 93.902 82 4 1 5142 5223 2999676 2999596 8.070000e-24 122.0
24 TraesCS7D01G007600 chr7A 94.595 74 4 0 5338 5411 2549935 2549862 1.350000e-21 115.0
25 TraesCS7D01G007600 chr7A 91.139 79 6 1 5144 5222 2847941 2847864 8.130000e-19 106.0
26 TraesCS7D01G007600 chr7A 90.000 80 7 1 5144 5223 2550078 2550000 1.050000e-17 102.0
27 TraesCS7D01G007600 chr7A 85.542 83 11 1 5328 5410 2999063 2998982 1.060000e-12 86.1
28 TraesCS7D01G007600 chr7A 90.000 40 4 0 600 639 650528647 650528608 1.100000e-02 52.8
29 TraesCS7D01G007600 chr4A 91.663 2231 174 7 2834 5055 740867714 740865487 0.000000e+00 3079.0
30 TraesCS7D01G007600 chr4A 91.914 2189 169 4 2831 5013 739808621 739810807 0.000000e+00 3055.0
31 TraesCS7D01G007600 chr4A 91.174 2198 176 10 2831 5013 739833335 739835529 0.000000e+00 2968.0
32 TraesCS7D01G007600 chr4A 90.542 2231 198 8 2834 5054 733927121 733924894 0.000000e+00 2939.0
33 TraesCS7D01G007600 chr4A 89.409 1218 106 17 952 2158 742271708 742270503 0.000000e+00 1513.0
34 TraesCS7D01G007600 chr4A 89.443 1203 111 9 965 2158 739831306 739832501 0.000000e+00 1504.0
35 TraesCS7D01G007600 chr4A 89.277 1203 110 11 965 2158 740063302 740062110 0.000000e+00 1489.0
36 TraesCS7D01G007600 chr4A 89.422 1021 105 1 993 2013 739806199 739807216 0.000000e+00 1284.0
37 TraesCS7D01G007600 chr4A 85.839 459 62 3 2375 2832 739832847 739833303 8.940000e-133 484.0
38 TraesCS7D01G007600 chr4A 85.403 459 62 4 2375 2832 740061762 740061308 6.960000e-129 472.0
39 TraesCS7D01G007600 chr4A 85.242 454 59 6 2375 2824 742270157 742269708 1.510000e-125 460.0
40 TraesCS7D01G007600 chr4A 87.936 373 43 2 2461 2832 740868120 740867749 7.060000e-119 438.0
41 TraesCS7D01G007600 chr4A 84.281 299 35 7 4724 5013 742267814 742267519 1.260000e-71 281.0
42 TraesCS7D01G007600 chr4A 83.618 293 41 2 5349 5634 741883354 741883062 9.800000e-68 268.0
43 TraesCS7D01G007600 chr4A 85.075 201 25 3 5349 5544 740660998 740661198 3.630000e-47 200.0
44 TraesCS7D01G007600 chr4A 87.681 138 15 1 2158 2293 739832530 739832667 6.150000e-35 159.0
45 TraesCS7D01G007600 chr4A 87.234 141 14 2 2164 2300 740062075 740061935 2.210000e-34 158.0
46 TraesCS7D01G007600 chr4A 80.952 189 29 7 276 464 89724844 89724663 6.200000e-30 143.0
47 TraesCS7D01G007600 chr4A 92.000 75 4 1 5337 5411 739835741 739835813 2.920000e-18 104.0
48 TraesCS7D01G007600 chr4A 91.892 74 6 0 5338 5411 740865278 740865205 2.920000e-18 104.0
49 TraesCS7D01G007600 chr4A 90.000 80 7 1 5144 5223 739810918 739810996 1.050000e-17 102.0
50 TraesCS7D01G007600 chr4A 90.411 73 7 0 5472 5544 740059086 740059014 4.890000e-16 97.1
51 TraesCS7D01G007600 chr4A 90.625 64 6 0 5348 5411 739684184 739684247 1.060000e-12 86.1
52 TraesCS7D01G007600 chr1A 82.812 192 27 6 274 464 117904407 117904221 3.680000e-37 167.0
53 TraesCS7D01G007600 chr1A 81.771 192 30 5 270 461 323632239 323632425 7.960000e-34 156.0
54 TraesCS7D01G007600 chr5B 82.812 192 26 7 274 464 579517261 579517076 1.320000e-36 165.0
55 TraesCS7D01G007600 chr3D 88.732 71 6 1 511 581 593206541 593206473 1.060000e-12 86.1
56 TraesCS7D01G007600 chrUn 90.741 54 0 5 581 632 27363069 27363119 3.840000e-07 67.6
57 TraesCS7D01G007600 chr5D 95.122 41 1 1 601 640 255943034 255943074 4.960000e-06 63.9
58 TraesCS7D01G007600 chr3A 100.000 28 0 0 600 627 150795908 150795935 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G007600 chr7D 3726332 3732264 5932 True 10957.000000 10957 100.000000 1 5933 1 chr7D.!!$R1 5932
1 TraesCS7D01G007600 chr7D 2429640 2432407 2767 False 1595.550000 3094 89.875000 2420 5213 2 chr7D.!!$F5 2793
2 TraesCS7D01G007600 chr7D 3699324 3702159 2835 False 1166.000000 2806 87.760000 2422 5544 3 chr7D.!!$F7 3122
3 TraesCS7D01G007600 chr7D 3438501 3443343 4842 False 701.900000 1314 88.253500 992 5223 2 chr7D.!!$F6 4231
4 TraesCS7D01G007600 chr7A 2549862 2555199 5337 True 2670.000000 7793 93.119000 1 5411 3 chr7A.!!$R3 5410
5 TraesCS7D01G007600 chr7A 2847864 2852298 4434 True 2189.000000 3836 94.147333 1 5222 3 chr7A.!!$R4 5221
6 TraesCS7D01G007600 chr7A 3379487 3380680 1193 False 1382.000000 1382 87.738000 892 2081 1 chr7A.!!$F1 1189
7 TraesCS7D01G007600 chr7A 2998982 3004364 5382 True 1265.775000 3554 90.064250 993 5410 4 chr7A.!!$R5 4417
8 TraesCS7D01G007600 chr7A 3582923 3585770 2847 False 337.500000 490 85.899500 2421 5544 2 chr7A.!!$F4 3123
9 TraesCS7D01G007600 chr4A 733924894 733927121 2227 True 2939.000000 2939 90.542000 2834 5054 1 chr4A.!!$R2 2220
10 TraesCS7D01G007600 chr4A 739806199 739810996 4797 False 1480.333333 3055 90.445333 993 5223 3 chr4A.!!$F3 4230
11 TraesCS7D01G007600 chr4A 740865205 740868120 2915 True 1207.000000 3079 90.497000 2461 5411 3 chr4A.!!$R5 2950
12 TraesCS7D01G007600 chr4A 739831306 739835813 4507 False 1043.800000 2968 89.227400 965 5411 5 chr4A.!!$F4 4446
13 TraesCS7D01G007600 chr4A 742267519 742271708 4189 True 751.333333 1513 86.310667 952 5013 3 chr4A.!!$R6 4061
14 TraesCS7D01G007600 chr4A 740059014 740063302 4288 True 554.025000 1489 88.081250 965 5544 4 chr4A.!!$R4 4579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.620700 AGTTATCGCCCTTCCCACCT 60.621 55.000 0.00 0.0 0.00 4.00 F
563 583 0.955919 CAAAGGCCGGGAGAAGTGAC 60.956 60.000 2.18 0.0 0.00 3.67 F
1621 1745 0.880278 TCGAGCTGTTGTGTCCTTGC 60.880 55.000 0.00 0.0 0.00 4.01 F
1897 2021 1.670406 GTGCCACTGCTCTCTGGTG 60.670 63.158 0.00 0.0 38.71 4.17 F
3207 4225 1.544314 GGCTGAGTGCAGAGGAAGTTT 60.544 52.381 0.00 0.0 45.17 2.66 F
4398 5428 0.664761 GCTGAGCTTTGCAGTCACAA 59.335 50.000 0.00 0.0 35.81 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 1745 0.968405 CCCACACCACCAAATCCAAG 59.032 55.000 0.0 0.0 0.00 3.61 R
1897 2021 1.444895 CATTGCTTTGCGGCCTGTC 60.445 57.895 0.0 0.0 0.00 3.51 R
2677 3649 1.098050 GCTTTTGGAGTCGGCATCAT 58.902 50.000 0.0 0.0 0.00 2.45 R
3759 4786 2.167487 TGTTTTTGTTCCCTCCAAGCAC 59.833 45.455 0.0 0.0 0.00 4.40 R
4703 5740 0.108804 TTGAGAAGGCGACACGGATC 60.109 55.000 0.0 0.0 0.00 3.36 R
5810 7118 0.040942 CCATTGTTGTGGGATGGGGA 59.959 55.000 0.0 0.0 37.31 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 0.620700 AGTTATCGCCCTTCCCACCT 60.621 55.000 0.00 0.00 0.00 4.00
248 249 1.686325 GACTAAGGGGCGCTGGATCA 61.686 60.000 7.64 0.00 0.00 2.92
272 273 1.572085 CTGCACGGGACTGAGCTTTG 61.572 60.000 0.00 0.00 0.00 2.77
394 412 5.252863 TCTCCCATTTTATTGAGGACCAAGA 59.747 40.000 0.00 0.00 38.31 3.02
563 583 0.955919 CAAAGGCCGGGAGAAGTGAC 60.956 60.000 2.18 0.00 0.00 3.67
594 614 3.745458 CCAATTTTATGGTTGTGGTGCAC 59.255 43.478 8.80 8.80 35.65 4.57
721 741 5.120830 CGGTCATCTTTCCTTAGTTTGACAG 59.879 44.000 0.00 0.00 34.27 3.51
722 742 5.106515 GGTCATCTTTCCTTAGTTTGACAGC 60.107 44.000 0.00 0.00 34.27 4.40
723 743 5.003804 TCATCTTTCCTTAGTTTGACAGCC 58.996 41.667 0.00 0.00 0.00 4.85
1015 1056 3.769844 GGAGGAGATGGAGTTTGTAGTGA 59.230 47.826 0.00 0.00 0.00 3.41
1208 1249 1.649664 CGGCTCAAGAACTGGATGAG 58.350 55.000 0.00 0.00 42.70 2.90
1457 1498 2.092429 ACACAAGAACAAGCTCCCAAGA 60.092 45.455 0.00 0.00 0.00 3.02
1621 1745 0.880278 TCGAGCTGTTGTGTCCTTGC 60.880 55.000 0.00 0.00 0.00 4.01
1830 1954 3.332485 AGGGCAACAACATAGGGAAGTTA 59.668 43.478 0.00 0.00 39.74 2.24
1897 2021 1.670406 GTGCCACTGCTCTCTGGTG 60.670 63.158 0.00 0.00 38.71 4.17
2621 3591 3.375782 ACAAGATTTCAAGCTGTTGGC 57.624 42.857 0.00 0.00 42.19 4.52
2677 3649 9.952030 TTATGTCCATACAGTTAATGTTCTCAA 57.048 29.630 0.00 0.00 39.96 3.02
2730 3702 3.545703 AGTATTTCTGAATCCCCAAGCG 58.454 45.455 0.00 0.00 0.00 4.68
3207 4225 1.544314 GGCTGAGTGCAGAGGAAGTTT 60.544 52.381 0.00 0.00 45.17 2.66
3526 4552 4.139786 CGACTCCCATTCCATTCATTCAT 58.860 43.478 0.00 0.00 0.00 2.57
3585 4611 4.706962 GGAAGGGTTTGACAGATAAGCATT 59.293 41.667 0.00 0.00 0.00 3.56
3635 4661 2.969628 AGTATTTGAGCCTCAGACGG 57.030 50.000 0.00 0.00 0.00 4.79
4169 5199 5.598830 CCTCTATAAGCTGACCCTTTCTGTA 59.401 44.000 0.00 0.00 0.00 2.74
4187 5217 4.340097 TCTGTAACAGTTCTTCGGACTGAA 59.660 41.667 9.17 0.00 35.62 3.02
4207 5237 2.503895 ACTTTCAAGCTCATCCAGGG 57.496 50.000 0.00 0.00 0.00 4.45
4226 5256 1.338674 GGCCTGCCCAAATTGTTTACC 60.339 52.381 0.00 0.00 0.00 2.85
4235 5265 4.021456 CCCAAATTGTTTACCCTCACCTTC 60.021 45.833 0.00 0.00 0.00 3.46
4249 5279 1.005748 CCTTCACACTCAGCGCAGA 60.006 57.895 11.47 6.15 0.00 4.26
4301 5331 7.129109 TCTTGAGGAAAATAAACAGCTTACG 57.871 36.000 0.00 0.00 0.00 3.18
4364 5394 0.888285 AGCTGCTTCGCTTCTTTGCT 60.888 50.000 0.00 0.00 36.74 3.91
4394 5424 1.633852 CGAGGCTGAGCTTTGCAGTC 61.634 60.000 3.72 5.89 38.23 3.51
4398 5428 0.664761 GCTGAGCTTTGCAGTCACAA 59.335 50.000 0.00 0.00 35.81 3.33
4415 5445 2.932614 CACAAGAGAAGAGGTAATGCCG 59.067 50.000 0.00 0.00 43.70 5.69
4430 5460 2.818132 CCGGCACTGGAGAGGATC 59.182 66.667 0.00 0.00 0.00 3.36
4445 5475 2.989840 GAGGATCGATATGCGGTTTGAG 59.010 50.000 0.00 0.00 41.33 3.02
4475 5505 1.499049 GGATTTACGGCATCGAGACC 58.501 55.000 0.00 0.00 40.11 3.85
4490 5520 2.678190 CGAGACCCTTAAAAGCCTCCAG 60.678 54.545 0.00 0.00 0.00 3.86
4505 5535 1.153208 CCAGGAGGTGCATCTCAGC 60.153 63.158 27.65 11.96 43.25 4.26
4535 5565 7.702348 GGTAATCAAGCAGATGAAATAACCAAC 59.298 37.037 0.00 0.00 36.96 3.77
4592 5622 4.365514 TTTGGACAAGAAGTATGCCAGA 57.634 40.909 0.00 0.00 0.00 3.86
4627 5658 6.744112 AGATAATCACCGAGTGAAGAGATTC 58.256 40.000 10.17 3.95 45.96 2.52
4631 5662 3.254903 TCACCGAGTGAAGAGATTCGAAA 59.745 43.478 0.00 0.00 39.78 3.46
4646 5677 7.819415 AGAGATTCGAAAATGTCACATTGTCTA 59.181 33.333 17.12 5.09 37.57 2.59
4652 5683 6.842780 CGAAAATGTCACATTGTCTATCGATG 59.157 38.462 17.12 0.00 42.15 3.84
4665 5696 5.154932 GTCTATCGATGGACCTACAAATCG 58.845 45.833 26.52 5.08 42.45 3.34
4678 5713 6.335777 ACCTACAAATCGTCTGGTATTGTAC 58.664 40.000 0.00 0.00 35.89 2.90
4700 5737 6.867662 ACAATTAAGTGGAGACTGTTTCAG 57.132 37.500 7.93 0.00 37.52 3.02
4703 5740 2.540265 AGTGGAGACTGTTTCAGCAG 57.460 50.000 0.54 0.00 41.92 4.24
4707 5744 2.027745 TGGAGACTGTTTCAGCAGATCC 60.028 50.000 0.54 10.56 41.60 3.36
4709 5746 1.620819 AGACTGTTTCAGCAGATCCGT 59.379 47.619 0.00 0.00 39.62 4.69
4721 5760 0.965866 AGATCCGTGTCGCCTTCTCA 60.966 55.000 0.00 0.00 0.00 3.27
4736 5775 4.733850 CCTTCTCAAGGGCGAAATAAAAC 58.266 43.478 0.00 0.00 45.27 2.43
4751 5790 7.462724 GCGAAATAAAACAACTGCATCCATTAC 60.463 37.037 0.00 0.00 0.00 1.89
4760 5799 7.112122 ACAACTGCATCCATTACTGATTCTTA 58.888 34.615 0.00 0.00 0.00 2.10
4796 5835 9.687210 CGTATATGGTACTGCTAAATCTGTTAA 57.313 33.333 0.00 0.00 0.00 2.01
4805 5844 8.997621 ACTGCTAAATCTGTTAACGATTCTTA 57.002 30.769 19.04 11.79 31.12 2.10
4880 5921 2.616842 CCTCAGTGTTTGGTTGTGGTAC 59.383 50.000 0.00 0.00 0.00 3.34
4887 5928 5.870978 AGTGTTTGGTTGTGGTACGTATATC 59.129 40.000 0.00 0.00 0.00 1.63
4888 5929 5.063817 GTGTTTGGTTGTGGTACGTATATCC 59.936 44.000 0.00 0.00 0.00 2.59
4890 5931 3.372897 TGGTTGTGGTACGTATATCCCA 58.627 45.455 0.00 0.00 0.00 4.37
4896 5937 5.113502 GTGGTACGTATATCCCACAGTAC 57.886 47.826 21.83 0.00 45.34 2.73
4898 5939 5.067674 GTGGTACGTATATCCCACAGTACAA 59.932 44.000 21.83 0.00 45.34 2.41
4901 5943 4.628074 ACGTATATCCCACAGTACAATGC 58.372 43.478 0.00 0.00 0.00 3.56
4915 5957 7.272731 CACAGTACAATGCTTGATTGAGATTTG 59.727 37.037 2.51 0.00 43.87 2.32
4924 5968 5.392380 GCTTGATTGAGATTTGTGTACCCTG 60.392 44.000 0.00 0.00 0.00 4.45
4932 5976 9.575868 TTGAGATTTGTGTACCCTGTATTTAAA 57.424 29.630 0.00 0.00 0.00 1.52
4988 6044 0.538287 GTCTCCTGCCCAAAGTGCTT 60.538 55.000 0.00 0.00 0.00 3.91
4990 6046 0.825010 CTCCTGCCCAAAGTGCTTGT 60.825 55.000 0.00 0.00 32.65 3.16
4996 6052 2.289945 TGCCCAAAGTGCTTGTGTTTTT 60.290 40.909 0.00 0.00 32.65 1.94
5013 6069 5.475564 GTGTTTTTGGAAGGTAGATTGCCTA 59.524 40.000 0.00 0.00 34.81 3.93
5014 6070 5.710099 TGTTTTTGGAAGGTAGATTGCCTAG 59.290 40.000 0.00 0.00 34.81 3.02
5015 6071 3.560636 TTGGAAGGTAGATTGCCTAGC 57.439 47.619 0.00 0.00 44.15 3.42
5020 6076 2.311124 GGTAGATTGCCTAGCGTTGT 57.689 50.000 0.00 0.00 36.30 3.32
5021 6077 2.202566 GGTAGATTGCCTAGCGTTGTC 58.797 52.381 0.00 0.00 36.30 3.18
5022 6078 2.202566 GTAGATTGCCTAGCGTTGTCC 58.797 52.381 0.00 0.00 0.00 4.02
5023 6079 0.107654 AGATTGCCTAGCGTTGTCCC 60.108 55.000 0.00 0.00 0.00 4.46
5025 6081 2.552231 ATTGCCTAGCGTTGTCCCCC 62.552 60.000 0.00 0.00 0.00 5.40
5049 6116 6.594159 CCCTATGTAGAGTTTGTGTTAACCTG 59.406 42.308 2.48 0.00 0.00 4.00
5055 6122 8.885722 TGTAGAGTTTGTGTTAACCTGTTTTAG 58.114 33.333 2.48 0.00 0.00 1.85
5080 6300 6.423905 GGTAGGAATTGGAAGCAAAGAAAAAC 59.576 38.462 0.00 0.00 0.00 2.43
5082 6302 5.130975 AGGAATTGGAAGCAAAGAAAAACCT 59.869 36.000 0.00 0.00 0.00 3.50
5083 6303 5.822519 GGAATTGGAAGCAAAGAAAAACCTT 59.177 36.000 0.00 0.00 0.00 3.50
5085 6305 5.413309 TTGGAAGCAAAGAAAAACCTTCA 57.587 34.783 0.00 0.00 34.96 3.02
5086 6306 5.413309 TGGAAGCAAAGAAAAACCTTCAA 57.587 34.783 0.00 0.00 34.96 2.69
5087 6307 5.418676 TGGAAGCAAAGAAAAACCTTCAAG 58.581 37.500 0.00 0.00 34.96 3.02
5088 6308 4.271049 GGAAGCAAAGAAAAACCTTCAAGC 59.729 41.667 0.00 0.00 34.96 4.01
5090 6310 4.686972 AGCAAAGAAAAACCTTCAAGCTC 58.313 39.130 0.00 0.00 29.07 4.09
5091 6311 3.487207 GCAAAGAAAAACCTTCAAGCTCG 59.513 43.478 0.00 0.00 0.00 5.03
5092 6312 4.672409 CAAAGAAAAACCTTCAAGCTCGT 58.328 39.130 0.00 0.00 0.00 4.18
5093 6313 4.983671 AAGAAAAACCTTCAAGCTCGTT 57.016 36.364 0.00 0.00 0.00 3.85
5094 6314 4.983671 AGAAAAACCTTCAAGCTCGTTT 57.016 36.364 0.00 0.00 0.00 3.60
5095 6315 4.672409 AGAAAAACCTTCAAGCTCGTTTG 58.328 39.130 0.00 0.00 0.00 2.93
5096 6316 4.157840 AGAAAAACCTTCAAGCTCGTTTGT 59.842 37.500 0.00 0.00 0.00 2.83
5097 6317 4.450082 AAAACCTTCAAGCTCGTTTGTT 57.550 36.364 0.00 0.00 0.00 2.83
5098 6318 3.692791 AACCTTCAAGCTCGTTTGTTC 57.307 42.857 0.00 0.00 0.00 3.18
5099 6319 1.947456 ACCTTCAAGCTCGTTTGTTCC 59.053 47.619 0.00 0.00 0.00 3.62
5100 6320 1.946768 CCTTCAAGCTCGTTTGTTCCA 59.053 47.619 0.00 0.00 0.00 3.53
5101 6321 2.357637 CCTTCAAGCTCGTTTGTTCCAA 59.642 45.455 0.00 0.00 0.00 3.53
5102 6322 3.181491 CCTTCAAGCTCGTTTGTTCCAAA 60.181 43.478 0.00 0.00 0.00 3.28
5103 6323 3.691049 TCAAGCTCGTTTGTTCCAAAG 57.309 42.857 0.00 0.00 0.00 2.77
5104 6324 2.357637 TCAAGCTCGTTTGTTCCAAAGG 59.642 45.455 0.00 3.65 0.00 3.11
5105 6325 2.341846 AGCTCGTTTGTTCCAAAGGA 57.658 45.000 10.54 10.54 0.00 3.36
5106 6326 2.650322 AGCTCGTTTGTTCCAAAGGAA 58.350 42.857 11.71 0.00 39.66 3.36
5107 6327 3.020984 AGCTCGTTTGTTCCAAAGGAAA 58.979 40.909 11.71 0.00 43.86 3.13
5108 6328 3.066760 AGCTCGTTTGTTCCAAAGGAAAG 59.933 43.478 11.71 4.69 43.86 2.62
5109 6329 3.795488 GCTCGTTTGTTCCAAAGGAAAGG 60.795 47.826 11.71 4.16 43.86 3.11
5110 6330 3.622630 TCGTTTGTTCCAAAGGAAAGGA 58.377 40.909 9.02 0.00 43.86 3.36
5111 6331 4.017808 TCGTTTGTTCCAAAGGAAAGGAA 58.982 39.130 9.02 0.00 43.86 3.36
5119 6339 6.806668 TTCCAAAGGAAAGGAACATTTTCT 57.193 33.333 0.00 0.00 38.93 2.52
5120 6340 6.806668 TCCAAAGGAAAGGAACATTTTCTT 57.193 33.333 0.48 0.48 39.24 2.52
5121 6341 7.194112 TCCAAAGGAAAGGAACATTTTCTTT 57.806 32.000 10.97 10.97 44.98 2.52
5124 6344 5.551305 AGGAAAGGAACATTTTCTTTGGG 57.449 39.130 0.00 0.00 31.69 4.12
5125 6345 5.215845 AGGAAAGGAACATTTTCTTTGGGA 58.784 37.500 0.00 0.00 31.69 4.37
5126 6346 5.665360 AGGAAAGGAACATTTTCTTTGGGAA 59.335 36.000 0.00 0.00 31.69 3.97
5127 6347 5.758296 GGAAAGGAACATTTTCTTTGGGAAC 59.242 40.000 0.00 0.00 31.69 3.62
5128 6348 4.584327 AGGAACATTTTCTTTGGGAACG 57.416 40.909 0.00 0.00 33.13 3.95
5129 6349 4.211920 AGGAACATTTTCTTTGGGAACGA 58.788 39.130 0.00 0.00 33.13 3.85
5130 6350 4.037565 AGGAACATTTTCTTTGGGAACGAC 59.962 41.667 0.00 0.00 33.13 4.34
5131 6351 4.202070 GGAACATTTTCTTTGGGAACGACA 60.202 41.667 0.00 0.00 33.13 4.35
5132 6352 4.993029 ACATTTTCTTTGGGAACGACAA 57.007 36.364 0.00 0.00 33.13 3.18
5133 6353 5.331876 ACATTTTCTTTGGGAACGACAAA 57.668 34.783 0.00 0.00 36.49 2.83
5134 6354 5.106442 ACATTTTCTTTGGGAACGACAAAC 58.894 37.500 0.00 0.00 34.43 2.93
5135 6355 3.786516 TTTCTTTGGGAACGACAAACC 57.213 42.857 0.00 0.00 34.43 3.27
5136 6356 1.682740 TCTTTGGGAACGACAAACCC 58.317 50.000 0.00 0.00 43.51 4.11
5137 6357 0.671796 CTTTGGGAACGACAAACCCC 59.328 55.000 0.00 0.00 42.65 4.95
5138 6358 0.756070 TTTGGGAACGACAAACCCCC 60.756 55.000 0.00 0.00 42.65 5.40
5139 6359 1.934459 TTGGGAACGACAAACCCCCA 61.934 55.000 0.00 0.00 44.69 4.96
5140 6360 1.152715 GGGAACGACAAACCCCCAA 60.153 57.895 0.00 0.00 37.85 4.12
5192 6412 2.540515 CGACCATACTGTAGCCAACTG 58.459 52.381 0.00 0.00 0.00 3.16
5272 6492 9.558396 AAAAATTTATGAATGAAAGCTCAACCA 57.442 25.926 0.00 0.00 34.49 3.67
5273 6493 8.767478 AAATTTATGAATGAAAGCTCAACCAG 57.233 30.769 0.00 0.00 34.49 4.00
5274 6494 7.707624 ATTTATGAATGAAAGCTCAACCAGA 57.292 32.000 0.00 0.00 34.49 3.86
5275 6495 7.523293 TTTATGAATGAAAGCTCAACCAGAA 57.477 32.000 0.00 0.00 34.49 3.02
5276 6496 7.523293 TTATGAATGAAAGCTCAACCAGAAA 57.477 32.000 0.00 0.00 34.49 2.52
5277 6497 5.850557 TGAATGAAAGCTCAACCAGAAAA 57.149 34.783 0.00 0.00 34.49 2.29
5278 6498 5.835257 TGAATGAAAGCTCAACCAGAAAAG 58.165 37.500 0.00 0.00 34.49 2.27
5279 6499 5.593909 TGAATGAAAGCTCAACCAGAAAAGA 59.406 36.000 0.00 0.00 34.49 2.52
5280 6500 5.702349 ATGAAAGCTCAACCAGAAAAGAG 57.298 39.130 0.00 0.00 34.49 2.85
5281 6501 3.885297 TGAAAGCTCAACCAGAAAAGAGG 59.115 43.478 0.00 0.00 0.00 3.69
5282 6502 3.584733 AAGCTCAACCAGAAAAGAGGT 57.415 42.857 0.00 0.00 40.22 3.85
5289 6509 4.519906 AACCAGAAAAGAGGTTGGAGAA 57.480 40.909 0.00 0.00 45.91 2.87
5290 6510 4.519906 ACCAGAAAAGAGGTTGGAGAAA 57.480 40.909 0.00 0.00 33.39 2.52
5291 6511 4.867086 ACCAGAAAAGAGGTTGGAGAAAA 58.133 39.130 0.00 0.00 33.39 2.29
5292 6512 4.889995 ACCAGAAAAGAGGTTGGAGAAAAG 59.110 41.667 0.00 0.00 33.39 2.27
5293 6513 5.133221 CCAGAAAAGAGGTTGGAGAAAAGA 58.867 41.667 0.00 0.00 32.34 2.52
5301 6521 6.187682 AGAGGTTGGAGAAAAGAAACTTTGA 58.812 36.000 0.00 0.00 0.00 2.69
5305 6525 6.871492 GGTTGGAGAAAAGAAACTTTGAACAA 59.129 34.615 0.00 0.00 0.00 2.83
5312 6532 9.487790 AGAAAAGAAACTTTGAACAATGACAAA 57.512 25.926 7.29 9.02 35.26 2.83
5315 6535 9.487790 AAAGAAACTTTGAACAATGACAAAAGA 57.512 25.926 11.14 0.00 35.95 2.52
5316 6536 8.693542 AGAAACTTTGAACAATGACAAAAGAG 57.306 30.769 11.14 4.51 35.95 2.85
5317 6537 8.306761 AGAAACTTTGAACAATGACAAAAGAGT 58.693 29.630 11.14 4.95 35.95 3.24
5318 6538 8.466086 AAACTTTGAACAATGACAAAAGAGTC 57.534 30.769 11.14 0.00 35.95 3.36
5372 6635 9.308318 GCTACCAGTGAAAGTTTTTGAAATTTA 57.692 29.630 0.00 0.00 0.00 1.40
5377 6640 9.528018 CAGTGAAAGTTTTTGAAATTTAGGCTA 57.472 29.630 0.00 0.00 0.00 3.93
5411 6676 5.241506 CCAAAATGTAAGGTTTCAGAGAGCA 59.758 40.000 0.00 0.00 0.00 4.26
5412 6677 6.071728 CCAAAATGTAAGGTTTCAGAGAGCAT 60.072 38.462 0.00 0.00 0.00 3.79
5420 6720 4.718774 AGGTTTCAGAGAGCATAGAATGGA 59.281 41.667 0.00 0.00 0.00 3.41
5422 6722 6.556495 AGGTTTCAGAGAGCATAGAATGGATA 59.444 38.462 0.00 0.00 0.00 2.59
5480 6780 4.547859 GGTACCTCGTCTCGGCTA 57.452 61.111 4.06 0.00 0.00 3.93
5482 6782 1.316651 GGTACCTCGTCTCGGCTAAT 58.683 55.000 4.06 0.00 0.00 1.73
5483 6783 2.498167 GGTACCTCGTCTCGGCTAATA 58.502 52.381 4.06 0.00 0.00 0.98
5484 6784 2.880890 GGTACCTCGTCTCGGCTAATAA 59.119 50.000 4.06 0.00 0.00 1.40
5509 6809 3.842428 CGAAAGAATGATGCAAAGTGTCG 59.158 43.478 0.00 0.00 0.00 4.35
5514 6814 8.437360 AAAGAATGATGCAAAGTGTCGATATA 57.563 30.769 0.00 0.00 0.00 0.86
5544 6844 6.402658 GCTGCCAAGAAACAGAGAATAGTTAC 60.403 42.308 0.00 0.00 35.90 2.50
5545 6845 6.769512 TGCCAAGAAACAGAGAATAGTTACT 58.230 36.000 0.00 0.00 0.00 2.24
5546 6846 7.903145 TGCCAAGAAACAGAGAATAGTTACTA 58.097 34.615 0.00 0.00 0.00 1.82
5547 6847 8.540388 TGCCAAGAAACAGAGAATAGTTACTAT 58.460 33.333 0.00 0.00 0.00 2.12
5549 6849 9.239002 CCAAGAAACAGAGAATAGTTACTATCG 57.761 37.037 5.26 0.00 0.00 2.92
5550 6850 8.747666 CAAGAAACAGAGAATAGTTACTATCGC 58.252 37.037 5.26 1.74 0.00 4.58
5560 6868 2.628178 AGTTACTATCGCCTGCATAGCA 59.372 45.455 9.30 0.00 36.92 3.49
5565 6873 0.107268 ATCGCCTGCATAGCATGTCA 59.893 50.000 9.30 0.00 38.13 3.58
5574 6882 6.094464 GCCTGCATAGCATGTCAATATGATTA 59.906 38.462 4.09 0.00 38.13 1.75
5575 6883 7.678927 GCCTGCATAGCATGTCAATATGATTAG 60.679 40.741 4.09 7.21 38.13 1.73
5578 6886 7.392393 TGCATAGCATGTCAATATGATTAGCTT 59.608 33.333 0.00 0.00 33.61 3.74
5582 6890 8.405418 AGCATGTCAATATGATTAGCTTGAAT 57.595 30.769 0.00 0.00 29.49 2.57
5583 6891 8.857098 AGCATGTCAATATGATTAGCTTGAATT 58.143 29.630 0.00 0.00 29.49 2.17
5584 6892 8.912658 GCATGTCAATATGATTAGCTTGAATTG 58.087 33.333 0.00 0.00 30.06 2.32
5626 6934 6.798315 AGCAATCTATTGATCTGCATACAC 57.202 37.500 18.45 0.00 40.14 2.90
5627 6935 6.293698 AGCAATCTATTGATCTGCATACACA 58.706 36.000 18.45 0.00 40.14 3.72
5628 6936 6.940867 AGCAATCTATTGATCTGCATACACAT 59.059 34.615 18.45 2.89 40.14 3.21
5629 6937 7.447545 AGCAATCTATTGATCTGCATACACATT 59.552 33.333 18.45 2.42 40.14 2.71
5630 6938 7.537649 GCAATCTATTGATCTGCATACACATTG 59.462 37.037 6.87 0.00 40.14 2.82
5631 6939 8.780249 CAATCTATTGATCTGCATACACATTGA 58.220 33.333 0.00 0.00 40.14 2.57
5632 6940 9.516546 AATCTATTGATCTGCATACACATTGAT 57.483 29.630 0.00 0.00 31.51 2.57
5633 6941 8.543862 TCTATTGATCTGCATACACATTGATC 57.456 34.615 0.00 0.00 0.00 2.92
5634 6942 5.662211 TTGATCTGCATACACATTGATCG 57.338 39.130 0.00 0.00 34.71 3.69
5635 6943 3.495753 TGATCTGCATACACATTGATCGC 59.504 43.478 0.00 0.00 34.71 4.58
5636 6944 3.183793 TCTGCATACACATTGATCGCT 57.816 42.857 0.00 0.00 0.00 4.93
5637 6945 3.534554 TCTGCATACACATTGATCGCTT 58.465 40.909 0.00 0.00 0.00 4.68
5638 6946 3.940852 TCTGCATACACATTGATCGCTTT 59.059 39.130 0.00 0.00 0.00 3.51
5639 6947 4.018649 TGCATACACATTGATCGCTTTG 57.981 40.909 0.00 0.00 0.00 2.77
5640 6948 3.181498 TGCATACACATTGATCGCTTTGG 60.181 43.478 0.00 0.00 0.00 3.28
5641 6949 3.065233 GCATACACATTGATCGCTTTGGA 59.935 43.478 0.00 0.00 0.00 3.53
5642 6950 4.438608 GCATACACATTGATCGCTTTGGAA 60.439 41.667 0.00 0.00 0.00 3.53
5643 6951 5.639757 CATACACATTGATCGCTTTGGAAA 58.360 37.500 0.00 0.00 0.00 3.13
5644 6952 4.789012 ACACATTGATCGCTTTGGAAAT 57.211 36.364 0.00 0.00 0.00 2.17
5645 6953 5.138125 ACACATTGATCGCTTTGGAAATT 57.862 34.783 0.00 0.00 0.00 1.82
5646 6954 5.540911 ACACATTGATCGCTTTGGAAATTT 58.459 33.333 0.00 0.00 0.00 1.82
5647 6955 6.686630 ACACATTGATCGCTTTGGAAATTTA 58.313 32.000 0.00 0.00 0.00 1.40
5648 6956 6.808212 ACACATTGATCGCTTTGGAAATTTAG 59.192 34.615 0.00 0.00 0.00 1.85
5649 6957 5.807011 ACATTGATCGCTTTGGAAATTTAGC 59.193 36.000 1.28 1.28 0.00 3.09
5650 6958 5.384063 TTGATCGCTTTGGAAATTTAGCA 57.616 34.783 10.46 0.29 33.29 3.49
5651 6959 5.581126 TGATCGCTTTGGAAATTTAGCAT 57.419 34.783 10.46 4.26 33.29 3.79
5652 6960 6.691754 TGATCGCTTTGGAAATTTAGCATA 57.308 33.333 10.46 0.00 33.29 3.14
5653 6961 6.728200 TGATCGCTTTGGAAATTTAGCATAG 58.272 36.000 10.46 0.00 33.29 2.23
5654 6962 5.499139 TCGCTTTGGAAATTTAGCATAGG 57.501 39.130 10.46 0.00 33.29 2.57
5655 6963 4.338118 TCGCTTTGGAAATTTAGCATAGGG 59.662 41.667 10.46 5.07 33.29 3.53
5656 6964 4.371786 GCTTTGGAAATTTAGCATAGGGC 58.628 43.478 5.92 0.00 45.30 5.19
5670 6978 5.535753 GCATAGGGCAAATAGTTGGAAAT 57.464 39.130 4.91 0.00 43.97 2.17
5671 6979 6.648879 GCATAGGGCAAATAGTTGGAAATA 57.351 37.500 4.91 0.00 43.97 1.40
5672 6980 6.447162 GCATAGGGCAAATAGTTGGAAATAC 58.553 40.000 4.91 0.00 43.97 1.89
5673 6981 6.516693 GCATAGGGCAAATAGTTGGAAATACC 60.517 42.308 4.91 0.00 43.97 2.73
5674 6982 8.824079 GCATAGGGCAAATAGTTGGAAATACCA 61.824 40.741 4.91 0.00 44.64 3.25
5686 6994 5.860941 TGGAAATACCAAAAGTGAAAGCA 57.139 34.783 0.00 0.00 46.75 3.91
5687 6995 6.418057 TGGAAATACCAAAAGTGAAAGCAT 57.582 33.333 0.00 0.00 46.75 3.79
5688 6996 6.222389 TGGAAATACCAAAAGTGAAAGCATG 58.778 36.000 0.00 0.00 46.75 4.06
5689 6997 5.120674 GGAAATACCAAAAGTGAAAGCATGC 59.879 40.000 10.51 10.51 38.79 4.06
5690 6998 2.531522 ACCAAAAGTGAAAGCATGCC 57.468 45.000 15.66 0.00 0.00 4.40
5691 6999 1.761784 ACCAAAAGTGAAAGCATGCCA 59.238 42.857 15.66 1.92 0.00 4.92
5692 7000 2.369532 ACCAAAAGTGAAAGCATGCCAT 59.630 40.909 15.66 2.67 0.00 4.40
5693 7001 3.181452 ACCAAAAGTGAAAGCATGCCATT 60.181 39.130 15.66 10.30 0.00 3.16
5694 7002 3.816523 CCAAAAGTGAAAGCATGCCATTT 59.183 39.130 15.66 9.54 0.00 2.32
5695 7003 4.996122 CCAAAAGTGAAAGCATGCCATTTA 59.004 37.500 15.66 4.03 0.00 1.40
5696 7004 5.106987 CCAAAAGTGAAAGCATGCCATTTAC 60.107 40.000 15.66 16.12 0.00 2.01
5697 7005 4.870123 AAGTGAAAGCATGCCATTTACA 57.130 36.364 22.43 12.64 0.00 2.41
5698 7006 4.178545 AGTGAAAGCATGCCATTTACAC 57.821 40.909 22.43 19.72 0.00 2.90
5699 7007 3.828451 AGTGAAAGCATGCCATTTACACT 59.172 39.130 22.43 20.95 0.00 3.55
5700 7008 3.922240 GTGAAAGCATGCCATTTACACTG 59.078 43.478 15.66 0.00 0.00 3.66
5701 7009 2.660189 AAGCATGCCATTTACACTGC 57.340 45.000 15.66 0.00 0.00 4.40
5702 7010 0.819582 AGCATGCCATTTACACTGCC 59.180 50.000 15.66 0.00 0.00 4.85
5705 7013 0.810648 ATGCCATTTACACTGCCGTG 59.189 50.000 6.73 6.73 46.63 4.94
5707 7015 1.861542 GCCATTTACACTGCCGTGCA 61.862 55.000 8.32 0.00 45.10 4.57
5708 7016 0.595588 CCATTTACACTGCCGTGCAA 59.404 50.000 8.32 0.00 45.10 4.08
5721 7029 2.933260 GCCGTGCAAAAAGAAAAGGAAA 59.067 40.909 0.00 0.00 0.00 3.13
5723 7031 4.142795 GCCGTGCAAAAAGAAAAGGAAAAA 60.143 37.500 0.00 0.00 0.00 1.94
5725 7033 5.964751 CCGTGCAAAAAGAAAAGGAAAAATG 59.035 36.000 0.00 0.00 0.00 2.32
5728 7036 7.634432 CGTGCAAAAAGAAAAGGAAAAATGTAC 59.366 33.333 0.00 0.00 0.00 2.90
5730 7038 9.877178 TGCAAAAAGAAAAGGAAAAATGTACTA 57.123 25.926 0.00 0.00 0.00 1.82
5743 7051 9.028185 GGAAAAATGTACTAGTATCAGGTAACG 57.972 37.037 5.75 0.00 46.39 3.18
5744 7052 9.578439 GAAAAATGTACTAGTATCAGGTAACGT 57.422 33.333 5.75 0.00 46.39 3.99
5745 7053 8.922058 AAAATGTACTAGTATCAGGTAACGTG 57.078 34.615 5.75 0.00 46.39 4.49
5746 7054 5.490139 TGTACTAGTATCAGGTAACGTGC 57.510 43.478 5.75 0.00 46.39 5.34
5748 7056 6.348498 TGTACTAGTATCAGGTAACGTGCTA 58.652 40.000 5.75 0.00 46.39 3.49
5749 7057 6.481313 TGTACTAGTATCAGGTAACGTGCTAG 59.519 42.308 5.75 0.00 46.39 3.42
5750 7058 4.820716 ACTAGTATCAGGTAACGTGCTAGG 59.179 45.833 0.00 0.00 46.39 3.02
5751 7059 2.957006 AGTATCAGGTAACGTGCTAGGG 59.043 50.000 0.00 0.00 46.39 3.53
5753 7061 1.180029 TCAGGTAACGTGCTAGGGAC 58.820 55.000 0.00 0.00 46.39 4.46
5754 7062 0.892755 CAGGTAACGTGCTAGGGACA 59.107 55.000 0.00 0.00 46.39 4.02
5755 7063 1.135083 CAGGTAACGTGCTAGGGACAG 60.135 57.143 0.00 0.00 46.39 3.51
5756 7064 0.175073 GGTAACGTGCTAGGGACAGG 59.825 60.000 0.00 0.00 0.00 4.00
5757 7065 0.175073 GTAACGTGCTAGGGACAGGG 59.825 60.000 0.00 0.00 0.00 4.45
5759 7067 3.470888 CGTGCTAGGGACAGGGGG 61.471 72.222 0.00 0.00 0.00 5.40
5761 7069 1.923909 GTGCTAGGGACAGGGGGTT 60.924 63.158 0.00 0.00 0.00 4.11
5762 7070 1.615424 TGCTAGGGACAGGGGGTTC 60.615 63.158 0.00 0.00 0.00 3.62
5764 7072 0.988678 GCTAGGGACAGGGGGTTCAT 60.989 60.000 0.00 0.00 0.00 2.57
5765 7073 1.694693 GCTAGGGACAGGGGGTTCATA 60.695 57.143 0.00 0.00 0.00 2.15
5766 7074 2.330216 CTAGGGACAGGGGGTTCATAG 58.670 57.143 0.00 0.00 33.38 2.23
5769 7077 1.212195 GGGACAGGGGGTTCATAGTTC 59.788 57.143 0.00 0.00 0.00 3.01
5770 7078 1.913419 GGACAGGGGGTTCATAGTTCA 59.087 52.381 0.00 0.00 0.00 3.18
5771 7079 2.092914 GGACAGGGGGTTCATAGTTCAG 60.093 54.545 0.00 0.00 0.00 3.02
5772 7080 2.838202 GACAGGGGGTTCATAGTTCAGA 59.162 50.000 0.00 0.00 0.00 3.27
5773 7081 3.256704 ACAGGGGGTTCATAGTTCAGAA 58.743 45.455 0.00 0.00 0.00 3.02
5774 7082 3.264450 ACAGGGGGTTCATAGTTCAGAAG 59.736 47.826 0.00 0.00 0.00 2.85
5775 7083 2.239907 AGGGGGTTCATAGTTCAGAAGC 59.760 50.000 0.00 0.00 40.49 3.86
5777 7085 3.561313 GGGGGTTCATAGTTCAGAAGCAA 60.561 47.826 0.00 0.00 42.37 3.91
5778 7086 3.691609 GGGGTTCATAGTTCAGAAGCAAG 59.308 47.826 0.00 0.00 42.37 4.01
5779 7087 3.127721 GGGTTCATAGTTCAGAAGCAAGC 59.872 47.826 0.00 0.00 42.37 4.01
5781 7089 4.397417 GGTTCATAGTTCAGAAGCAAGCAT 59.603 41.667 0.00 0.00 40.80 3.79
5783 7091 4.194640 TCATAGTTCAGAAGCAAGCATCC 58.805 43.478 0.00 0.00 0.00 3.51
5784 7092 2.574006 AGTTCAGAAGCAAGCATCCA 57.426 45.000 0.00 0.00 0.00 3.41
5785 7093 2.157738 AGTTCAGAAGCAAGCATCCAC 58.842 47.619 0.00 0.00 0.00 4.02
5786 7094 1.881973 GTTCAGAAGCAAGCATCCACA 59.118 47.619 0.00 0.00 0.00 4.17
5787 7095 1.527034 TCAGAAGCAAGCATCCACAC 58.473 50.000 0.00 0.00 0.00 3.82
5788 7096 1.202794 TCAGAAGCAAGCATCCACACA 60.203 47.619 0.00 0.00 0.00 3.72
5789 7097 1.610038 CAGAAGCAAGCATCCACACAA 59.390 47.619 0.00 0.00 0.00 3.33
5791 7099 2.035066 AGAAGCAAGCATCCACACAAAC 59.965 45.455 0.00 0.00 0.00 2.93
5792 7100 1.401761 AGCAAGCATCCACACAAACA 58.598 45.000 0.00 0.00 0.00 2.83
5794 7102 1.869342 GCAAGCATCCACACAAACACC 60.869 52.381 0.00 0.00 0.00 4.16
5796 7104 1.774110 AGCATCCACACAAACACCAA 58.226 45.000 0.00 0.00 0.00 3.67
5798 7106 2.699846 AGCATCCACACAAACACCAATT 59.300 40.909 0.00 0.00 0.00 2.32
5799 7107 3.894427 AGCATCCACACAAACACCAATTA 59.106 39.130 0.00 0.00 0.00 1.40
5800 7108 4.527816 AGCATCCACACAAACACCAATTAT 59.472 37.500 0.00 0.00 0.00 1.28
5801 7109 4.626604 GCATCCACACAAACACCAATTATG 59.373 41.667 0.00 0.00 0.00 1.90
5813 7121 3.116079 CCAATTATGGCAAGCATTCCC 57.884 47.619 0.00 0.00 40.58 3.97
5814 7122 2.224354 CCAATTATGGCAAGCATTCCCC 60.224 50.000 0.00 0.00 40.58 4.81
5815 7123 2.435069 CAATTATGGCAAGCATTCCCCA 59.565 45.455 0.00 0.00 31.94 4.96
5816 7124 2.475339 TTATGGCAAGCATTCCCCAT 57.525 45.000 0.00 0.00 39.64 4.00
5817 7125 1.999648 TATGGCAAGCATTCCCCATC 58.000 50.000 0.00 0.00 38.03 3.51
5818 7126 0.761702 ATGGCAAGCATTCCCCATCC 60.762 55.000 0.00 0.00 33.37 3.51
5819 7127 2.136229 GGCAAGCATTCCCCATCCC 61.136 63.158 0.00 0.00 0.00 3.85
5821 7129 1.679559 GCAAGCATTCCCCATCCCAC 61.680 60.000 0.00 0.00 0.00 4.61
5822 7130 0.324552 CAAGCATTCCCCATCCCACA 60.325 55.000 0.00 0.00 0.00 4.17
5823 7131 0.413037 AAGCATTCCCCATCCCACAA 59.587 50.000 0.00 0.00 0.00 3.33
5825 7133 0.614415 GCATTCCCCATCCCACAACA 60.614 55.000 0.00 0.00 0.00 3.33
5826 7134 1.935799 CATTCCCCATCCCACAACAA 58.064 50.000 0.00 0.00 0.00 2.83
5827 7135 2.469952 CATTCCCCATCCCACAACAAT 58.530 47.619 0.00 0.00 0.00 2.71
5828 7136 1.935799 TTCCCCATCCCACAACAATG 58.064 50.000 0.00 0.00 0.00 2.82
5829 7137 0.040942 TCCCCATCCCACAACAATGG 59.959 55.000 0.00 0.00 39.76 3.16
5830 7138 0.040942 CCCCATCCCACAACAATGGA 59.959 55.000 2.22 0.00 43.02 3.41
5831 7139 1.477553 CCCATCCCACAACAATGGAG 58.522 55.000 2.22 0.00 43.02 3.86
5834 7142 3.563261 CCCATCCCACAACAATGGAGTTA 60.563 47.826 2.22 0.00 43.02 2.24
5835 7143 3.696051 CCATCCCACAACAATGGAGTTAG 59.304 47.826 0.00 0.00 43.02 2.34
5836 7144 4.567537 CCATCCCACAACAATGGAGTTAGA 60.568 45.833 0.00 0.00 43.02 2.10
5837 7145 4.927267 TCCCACAACAATGGAGTTAGAT 57.073 40.909 0.00 0.00 43.02 1.98
5839 7147 6.575244 TCCCACAACAATGGAGTTAGATAT 57.425 37.500 0.00 0.00 43.02 1.63
5840 7148 6.356556 TCCCACAACAATGGAGTTAGATATG 58.643 40.000 0.00 0.00 43.02 1.78
5841 7149 5.009010 CCCACAACAATGGAGTTAGATATGC 59.991 44.000 0.00 0.00 43.02 3.14
5842 7150 5.589855 CCACAACAATGGAGTTAGATATGCA 59.410 40.000 0.00 0.00 43.02 3.96
5843 7151 6.238566 CCACAACAATGGAGTTAGATATGCAG 60.239 42.308 0.00 0.00 43.02 4.41
5844 7152 6.317140 CACAACAATGGAGTTAGATATGCAGT 59.683 38.462 0.00 0.00 0.00 4.40
5845 7153 6.540189 ACAACAATGGAGTTAGATATGCAGTC 59.460 38.462 0.00 0.00 0.00 3.51
5847 7155 6.286758 ACAATGGAGTTAGATATGCAGTCAG 58.713 40.000 0.00 0.00 0.00 3.51
5849 7157 6.737720 ATGGAGTTAGATATGCAGTCAGAA 57.262 37.500 0.00 0.00 0.00 3.02
5850 7158 6.154203 TGGAGTTAGATATGCAGTCAGAAG 57.846 41.667 0.00 0.00 0.00 2.85
5851 7159 4.987912 GGAGTTAGATATGCAGTCAGAAGC 59.012 45.833 0.00 0.00 0.00 3.86
5853 7161 5.599732 AGTTAGATATGCAGTCAGAAGCAG 58.400 41.667 5.19 0.00 44.94 4.24
5854 7162 2.836262 AGATATGCAGTCAGAAGCAGC 58.164 47.619 5.19 0.00 44.94 5.25
5855 7163 2.169978 AGATATGCAGTCAGAAGCAGCA 59.830 45.455 0.00 0.00 44.94 4.41
5856 7164 2.477845 TATGCAGTCAGAAGCAGCAA 57.522 45.000 0.00 0.00 44.94 3.91
5857 7165 1.835494 ATGCAGTCAGAAGCAGCAAT 58.165 45.000 0.00 0.00 44.94 3.56
5858 7166 0.879090 TGCAGTCAGAAGCAGCAATG 59.121 50.000 0.00 0.00 35.51 2.82
5859 7167 0.456312 GCAGTCAGAAGCAGCAATGC 60.456 55.000 0.00 0.00 0.00 3.56
5861 7169 1.135660 CAGTCAGAAGCAGCAATGCAG 60.136 52.381 8.35 0.00 37.25 4.41
5864 7172 0.732880 CAGAAGCAGCAATGCAGCAC 60.733 55.000 23.83 16.47 43.44 4.40
5865 7173 1.800315 GAAGCAGCAATGCAGCACG 60.800 57.895 23.83 0.00 43.44 5.34
5866 7174 2.191354 GAAGCAGCAATGCAGCACGA 62.191 55.000 23.83 0.00 43.44 4.35
5867 7175 2.467946 AAGCAGCAATGCAGCACGAC 62.468 55.000 23.83 0.00 43.44 4.34
5868 7176 2.177531 CAGCAATGCAGCACGACC 59.822 61.111 8.35 0.00 36.85 4.79
5870 7178 3.364441 GCAATGCAGCACGACCCA 61.364 61.111 0.00 0.00 0.00 4.51
5873 7181 1.968017 AATGCAGCACGACCCAGTG 60.968 57.895 0.00 0.00 44.47 3.66
5874 7182 3.907260 ATGCAGCACGACCCAGTGG 62.907 63.158 0.63 0.63 42.09 4.00
5875 7183 4.314440 GCAGCACGACCCAGTGGA 62.314 66.667 11.95 0.00 42.09 4.02
5877 7185 1.961277 CAGCACGACCCAGTGGAAC 60.961 63.158 11.95 2.96 42.09 3.62
5880 7188 1.445942 CACGACCCAGTGGAACAGT 59.554 57.895 11.95 0.00 46.79 3.55
5893 7201 6.334102 AGTGGAACAGTGAACTAGAACTAG 57.666 41.667 0.00 7.24 42.47 2.57
5894 7202 4.924462 GTGGAACAGTGAACTAGAACTAGC 59.076 45.833 8.54 0.00 41.80 3.42
5895 7203 4.021368 TGGAACAGTGAACTAGAACTAGCC 60.021 45.833 8.54 2.77 36.66 3.93
5896 7204 4.021368 GGAACAGTGAACTAGAACTAGCCA 60.021 45.833 8.54 5.01 36.66 4.75
5898 7206 5.546621 ACAGTGAACTAGAACTAGCCAAA 57.453 39.130 8.54 0.00 36.66 3.28
5899 7207 5.298347 ACAGTGAACTAGAACTAGCCAAAC 58.702 41.667 8.54 3.56 36.66 2.93
5900 7208 5.163343 ACAGTGAACTAGAACTAGCCAAACA 60.163 40.000 8.54 1.11 36.66 2.83
5901 7209 5.177696 CAGTGAACTAGAACTAGCCAAACAC 59.822 44.000 8.54 10.61 36.66 3.32
5902 7210 4.451435 GTGAACTAGAACTAGCCAAACACC 59.549 45.833 8.54 0.00 36.66 4.16
5903 7211 3.697619 ACTAGAACTAGCCAAACACCC 57.302 47.619 8.54 0.00 36.66 4.61
5904 7212 2.976882 ACTAGAACTAGCCAAACACCCA 59.023 45.455 8.54 0.00 36.66 4.51
5905 7213 3.393278 ACTAGAACTAGCCAAACACCCAA 59.607 43.478 8.54 0.00 36.66 4.12
5906 7214 2.863809 AGAACTAGCCAAACACCCAAG 58.136 47.619 0.00 0.00 0.00 3.61
5907 7215 1.886542 GAACTAGCCAAACACCCAAGG 59.113 52.381 0.00 0.00 0.00 3.61
5910 7218 2.162681 CTAGCCAAACACCCAAGGAAG 58.837 52.381 0.00 0.00 0.00 3.46
5911 7219 0.469892 AGCCAAACACCCAAGGAAGG 60.470 55.000 0.00 0.00 0.00 3.46
5912 7220 0.469144 GCCAAACACCCAAGGAAGGA 60.469 55.000 0.00 0.00 0.00 3.36
5913 7221 2.032151 GCCAAACACCCAAGGAAGGAA 61.032 52.381 0.00 0.00 0.00 3.36
5916 7224 0.853530 AACACCCAAGGAAGGAAGCT 59.146 50.000 0.00 0.00 0.00 3.74
5917 7225 0.402121 ACACCCAAGGAAGGAAGCTC 59.598 55.000 0.00 0.00 0.00 4.09
5918 7226 0.401738 CACCCAAGGAAGGAAGCTCA 59.598 55.000 0.00 0.00 0.00 4.26
5919 7227 0.695347 ACCCAAGGAAGGAAGCTCAG 59.305 55.000 0.00 0.00 0.00 3.35
5920 7228 0.695347 CCCAAGGAAGGAAGCTCAGT 59.305 55.000 0.00 0.00 0.00 3.41
5921 7229 1.339535 CCCAAGGAAGGAAGCTCAGTC 60.340 57.143 0.00 0.00 0.00 3.51
5923 7231 2.614987 CCAAGGAAGGAAGCTCAGTCAG 60.615 54.545 0.00 0.00 0.00 3.51
5925 7233 1.203237 AGGAAGGAAGCTCAGTCAGGA 60.203 52.381 0.00 0.00 0.00 3.86
5926 7234 1.625818 GGAAGGAAGCTCAGTCAGGAA 59.374 52.381 0.00 0.00 0.00 3.36
5928 7236 3.452627 GGAAGGAAGCTCAGTCAGGAATA 59.547 47.826 0.00 0.00 0.00 1.75
5929 7237 4.080863 GGAAGGAAGCTCAGTCAGGAATAA 60.081 45.833 0.00 0.00 0.00 1.40
5931 7239 5.096443 AGGAAGCTCAGTCAGGAATAAAG 57.904 43.478 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
248 249 2.236223 CTCAGTCCCGTGCAGCTCAT 62.236 60.000 0.00 0.00 0.00 2.90
394 412 0.038599 TGGTCTCAGCATGCACCAAT 59.961 50.000 21.68 0.00 43.22 3.16
468 488 2.488153 TGTGTAGTCTCACCACTCATCG 59.512 50.000 0.00 0.00 37.51 3.84
563 583 7.037438 CACAACCATAAAATTGGGAGAGAATG 58.963 38.462 0.00 0.00 41.35 2.67
594 614 0.675837 CCGGCCTCTGCATCATATGG 60.676 60.000 0.00 0.00 40.13 2.74
721 741 4.559153 ACAATAAAGCAAACACATCAGGC 58.441 39.130 0.00 0.00 0.00 4.85
722 742 7.144722 TCTACAATAAAGCAAACACATCAGG 57.855 36.000 0.00 0.00 0.00 3.86
723 743 9.630098 AATTCTACAATAAAGCAAACACATCAG 57.370 29.630 0.00 0.00 0.00 2.90
1208 1249 2.182842 GCCATGTCACGGATCTGCC 61.183 63.158 0.00 0.00 0.00 4.85
1621 1745 0.968405 CCCACACCACCAAATCCAAG 59.032 55.000 0.00 0.00 0.00 3.61
1897 2021 1.444895 CATTGCTTTGCGGCCTGTC 60.445 57.895 0.00 0.00 0.00 3.51
2349 2789 4.574674 TGCTTCTAGATTGTTGGTCCAT 57.425 40.909 0.00 0.00 0.00 3.41
2677 3649 1.098050 GCTTTTGGAGTCGGCATCAT 58.902 50.000 0.00 0.00 0.00 2.45
2730 3702 4.930696 TCCATTCCTTTACCTTCTTTCCC 58.069 43.478 0.00 0.00 0.00 3.97
3207 4225 6.712095 ACAAGCTGATTGAAGTATGTTTCTGA 59.288 34.615 13.20 0.00 41.83 3.27
3585 4611 9.356433 CACAAGCATTTTACATATGTCATTCAA 57.644 29.630 12.68 0.00 0.00 2.69
3759 4786 2.167487 TGTTTTTGTTCCCTCCAAGCAC 59.833 45.455 0.00 0.00 0.00 4.40
3801 4828 3.557898 GGCTCCTTGTTCTTCTCATGTGA 60.558 47.826 0.00 0.00 0.00 3.58
4169 5199 4.138487 AGTTTCAGTCCGAAGAACTGTT 57.862 40.909 0.00 0.00 43.43 3.16
4187 5217 2.800250 CCCTGGATGAGCTTGAAAGTT 58.200 47.619 0.00 0.00 0.00 2.66
4207 5237 1.338674 GGGTAAACAATTTGGGCAGGC 60.339 52.381 0.78 0.00 0.00 4.85
4226 5256 0.668706 CGCTGAGTGTGAAGGTGAGG 60.669 60.000 0.00 0.00 0.00 3.86
4235 5265 1.563435 CCTTGTCTGCGCTGAGTGTG 61.563 60.000 17.98 8.14 0.00 3.82
4249 5279 4.594920 CCACTATGTCCCTATCATCCTTGT 59.405 45.833 0.00 0.00 0.00 3.16
4301 5331 4.505742 GGTGGAATAATGATCTCCCTGTCC 60.506 50.000 0.00 0.00 0.00 4.02
4364 5394 2.037367 AGCCTCGGCACCAGAGTA 59.963 61.111 11.02 0.00 44.88 2.59
4394 5424 2.932614 CGGCATTACCTCTTCTCTTGTG 59.067 50.000 0.00 0.00 35.61 3.33
4398 5428 0.466124 GCCGGCATTACCTCTTCTCT 59.534 55.000 24.80 0.00 35.61 3.10
4415 5445 1.621992 TATCGATCCTCTCCAGTGCC 58.378 55.000 0.00 0.00 0.00 5.01
4430 5460 0.532862 AGGCCTCAAACCGCATATCG 60.533 55.000 0.00 0.00 38.08 2.92
4445 5475 1.749063 CCGTAAATCCCTTCAAAGGCC 59.251 52.381 0.00 0.00 45.10 5.19
4475 5505 2.426842 CCTCCTGGAGGCTTTTAAGG 57.573 55.000 28.90 4.07 43.29 2.69
4490 5520 1.078848 AACGCTGAGATGCACCTCC 60.079 57.895 5.37 0.00 32.32 4.30
4505 5535 4.944962 TTCATCTGCTTGATTACCAACG 57.055 40.909 0.00 0.00 32.05 4.10
4567 5597 4.947388 TGGCATACTTCTTGTCCAAATACC 59.053 41.667 0.00 0.00 0.00 2.73
4592 5622 3.443681 CGGTGATTATCTTTGGCCACTTT 59.556 43.478 3.88 0.00 0.00 2.66
4627 5658 6.331170 TCGATAGACAATGTGACATTTTCG 57.669 37.500 16.14 14.64 42.67 3.46
4646 5677 3.637229 AGACGATTTGTAGGTCCATCGAT 59.363 43.478 13.76 0.00 40.83 3.59
4652 5683 4.667519 ATACCAGACGATTTGTAGGTCC 57.332 45.455 4.37 0.00 39.20 4.46
4665 5696 8.038944 TCTCCACTTAATTGTACAATACCAGAC 58.961 37.037 21.07 0.00 0.00 3.51
4678 5713 5.239306 TGCTGAAACAGTCTCCACTTAATTG 59.761 40.000 0.00 0.00 33.43 2.32
4700 5737 2.125512 AAGGCGACACGGATCTGC 60.126 61.111 0.00 0.00 0.00 4.26
4703 5740 0.108804 TTGAGAAGGCGACACGGATC 60.109 55.000 0.00 0.00 0.00 3.36
4707 5744 3.862124 CCTTGAGAAGGCGACACG 58.138 61.111 0.00 0.00 42.78 4.49
4721 5760 3.068873 TGCAGTTGTTTTATTTCGCCCTT 59.931 39.130 0.00 0.00 0.00 3.95
4727 5766 8.863049 CAGTAATGGATGCAGTTGTTTTATTTC 58.137 33.333 0.00 0.00 0.00 2.17
4735 5774 5.503927 AGAATCAGTAATGGATGCAGTTGT 58.496 37.500 0.00 0.00 0.00 3.32
4736 5775 6.446781 AAGAATCAGTAATGGATGCAGTTG 57.553 37.500 0.00 0.00 0.00 3.16
4760 5799 8.118976 AGCAGTACCATATACGTACACATTAT 57.881 34.615 0.00 0.00 38.85 1.28
4775 5814 6.636705 TCGTTAACAGATTTAGCAGTACCAT 58.363 36.000 6.39 0.00 0.00 3.55
4850 5891 4.451900 ACCAAACACTGAGGTAAGTTCAG 58.548 43.478 0.98 0.98 45.89 3.02
4863 5904 2.406596 ACGTACCACAACCAAACACT 57.593 45.000 0.00 0.00 0.00 3.55
4880 5921 4.883083 AGCATTGTACTGTGGGATATACG 58.117 43.478 0.00 0.00 0.00 3.06
4898 5939 5.126061 GGGTACACAAATCTCAATCAAGCAT 59.874 40.000 0.00 0.00 0.00 3.79
4901 5943 5.707298 ACAGGGTACACAAATCTCAATCAAG 59.293 40.000 0.00 0.00 0.00 3.02
4932 5976 7.886629 ACTGAACCATGTGATTGCTATTTAT 57.113 32.000 0.00 0.00 0.00 1.40
4942 5986 3.228188 ACACCAACTGAACCATGTGAT 57.772 42.857 0.00 0.00 0.00 3.06
4974 6024 0.461135 AACACAAGCACTTTGGGCAG 59.539 50.000 0.00 0.00 44.37 4.85
4988 6044 4.038642 GGCAATCTACCTTCCAAAAACACA 59.961 41.667 0.00 0.00 0.00 3.72
4990 6046 4.479158 AGGCAATCTACCTTCCAAAAACA 58.521 39.130 0.00 0.00 31.87 2.83
4996 6052 1.412710 CGCTAGGCAATCTACCTTCCA 59.587 52.381 0.00 0.00 38.81 3.53
5022 6078 4.569719 AACACAAACTCTACATAGGGGG 57.430 45.455 0.00 0.00 0.00 5.40
5023 6079 5.878669 GGTTAACACAAACTCTACATAGGGG 59.121 44.000 8.10 0.00 0.00 4.79
5025 6081 7.159372 ACAGGTTAACACAAACTCTACATAGG 58.841 38.462 8.10 0.00 0.00 2.57
5027 6083 8.967664 AAACAGGTTAACACAAACTCTACATA 57.032 30.769 8.10 0.00 0.00 2.29
5049 6116 6.584185 TTGCTTCCAATTCCTACCTAAAAC 57.416 37.500 0.00 0.00 0.00 2.43
5055 6122 5.722021 TTTCTTTGCTTCCAATTCCTACC 57.278 39.130 0.00 0.00 0.00 3.18
5056 6123 6.423905 GGTTTTTCTTTGCTTCCAATTCCTAC 59.576 38.462 0.00 0.00 0.00 3.18
5057 6124 6.326323 AGGTTTTTCTTTGCTTCCAATTCCTA 59.674 34.615 0.00 0.00 0.00 2.94
5060 6127 6.538381 TGAAGGTTTTTCTTTGCTTCCAATTC 59.462 34.615 0.00 0.00 0.00 2.17
5062 6129 5.988287 TGAAGGTTTTTCTTTGCTTCCAAT 58.012 33.333 0.00 0.00 0.00 3.16
5064 6131 5.413309 TTGAAGGTTTTTCTTTGCTTCCA 57.587 34.783 0.00 0.00 0.00 3.53
5065 6132 4.271049 GCTTGAAGGTTTTTCTTTGCTTCC 59.729 41.667 0.00 0.00 0.00 3.46
5080 6300 1.946768 TGGAACAAACGAGCTTGAAGG 59.053 47.619 8.31 0.00 31.92 3.46
5096 6316 6.806668 AGAAAATGTTCCTTTCCTTTGGAA 57.193 33.333 0.00 0.00 39.73 3.53
5097 6317 6.806668 AAGAAAATGTTCCTTTCCTTTGGA 57.193 33.333 0.00 0.00 34.00 3.53
5098 6318 6.260714 CCAAAGAAAATGTTCCTTTCCTTTGG 59.739 38.462 11.27 11.27 40.17 3.28
5099 6319 6.260714 CCCAAAGAAAATGTTCCTTTCCTTTG 59.739 38.462 0.00 0.00 34.70 2.77
5100 6320 6.157820 TCCCAAAGAAAATGTTCCTTTCCTTT 59.842 34.615 0.00 0.00 34.00 3.11
5101 6321 5.665360 TCCCAAAGAAAATGTTCCTTTCCTT 59.335 36.000 0.00 0.00 34.00 3.36
5102 6322 5.215845 TCCCAAAGAAAATGTTCCTTTCCT 58.784 37.500 0.00 0.00 34.00 3.36
5103 6323 5.545063 TCCCAAAGAAAATGTTCCTTTCC 57.455 39.130 0.00 0.00 34.00 3.13
5104 6324 5.462068 CGTTCCCAAAGAAAATGTTCCTTTC 59.538 40.000 0.00 0.00 35.85 2.62
5105 6325 5.128008 TCGTTCCCAAAGAAAATGTTCCTTT 59.872 36.000 0.00 0.00 35.85 3.11
5106 6326 4.647399 TCGTTCCCAAAGAAAATGTTCCTT 59.353 37.500 0.00 0.00 35.85 3.36
5107 6327 4.037565 GTCGTTCCCAAAGAAAATGTTCCT 59.962 41.667 0.00 0.00 35.85 3.36
5108 6328 4.202070 TGTCGTTCCCAAAGAAAATGTTCC 60.202 41.667 0.00 0.00 35.85 3.62
5109 6329 4.927422 TGTCGTTCCCAAAGAAAATGTTC 58.073 39.130 0.00 0.00 35.85 3.18
5110 6330 4.993029 TGTCGTTCCCAAAGAAAATGTT 57.007 36.364 0.00 0.00 35.85 2.71
5111 6331 4.993029 TTGTCGTTCCCAAAGAAAATGT 57.007 36.364 0.00 0.00 35.85 2.71
5112 6332 4.506288 GGTTTGTCGTTCCCAAAGAAAATG 59.494 41.667 0.00 0.00 35.85 2.32
5113 6333 4.442332 GGGTTTGTCGTTCCCAAAGAAAAT 60.442 41.667 0.00 0.00 40.79 1.82
5114 6334 3.119065 GGGTTTGTCGTTCCCAAAGAAAA 60.119 43.478 0.00 0.00 40.79 2.29
5115 6335 2.427812 GGGTTTGTCGTTCCCAAAGAAA 59.572 45.455 0.00 0.00 40.79 2.52
5116 6336 2.025898 GGGTTTGTCGTTCCCAAAGAA 58.974 47.619 0.00 0.00 40.79 2.52
5117 6337 1.682740 GGGTTTGTCGTTCCCAAAGA 58.317 50.000 0.00 0.00 40.79 2.52
5118 6338 0.671796 GGGGTTTGTCGTTCCCAAAG 59.328 55.000 0.00 0.00 42.71 2.77
5119 6339 0.756070 GGGGGTTTGTCGTTCCCAAA 60.756 55.000 0.00 0.00 42.71 3.28
5120 6340 1.152715 GGGGGTTTGTCGTTCCCAA 60.153 57.895 0.00 0.00 42.71 4.12
5121 6341 1.934459 TTGGGGGTTTGTCGTTCCCA 61.934 55.000 0.00 0.00 45.06 4.37
5122 6342 0.541063 ATTGGGGGTTTGTCGTTCCC 60.541 55.000 0.00 0.00 40.41 3.97
5123 6343 0.601057 CATTGGGGGTTTGTCGTTCC 59.399 55.000 0.00 0.00 0.00 3.62
5124 6344 1.324383 ACATTGGGGGTTTGTCGTTC 58.676 50.000 0.00 0.00 0.00 3.95
5125 6345 2.660670 TACATTGGGGGTTTGTCGTT 57.339 45.000 0.00 0.00 0.00 3.85
5126 6346 2.891191 ATACATTGGGGGTTTGTCGT 57.109 45.000 0.00 0.00 0.00 4.34
5127 6347 4.456535 TGATATACATTGGGGGTTTGTCG 58.543 43.478 0.00 0.00 0.00 4.35
5128 6348 6.738453 GCATTGATATACATTGGGGGTTTGTC 60.738 42.308 0.00 0.00 32.52 3.18
5129 6349 5.070313 GCATTGATATACATTGGGGGTTTGT 59.930 40.000 0.00 0.00 32.52 2.83
5130 6350 5.305128 AGCATTGATATACATTGGGGGTTTG 59.695 40.000 0.00 0.00 32.52 2.93
5131 6351 5.466819 AGCATTGATATACATTGGGGGTTT 58.533 37.500 0.00 0.00 32.52 3.27
5132 6352 5.078683 AGCATTGATATACATTGGGGGTT 57.921 39.130 0.00 0.00 32.52 4.11
5133 6353 4.106179 TGAGCATTGATATACATTGGGGGT 59.894 41.667 0.00 0.00 32.52 4.95
5134 6354 4.665451 TGAGCATTGATATACATTGGGGG 58.335 43.478 0.00 0.00 32.52 5.40
5135 6355 6.491062 TCTTTGAGCATTGATATACATTGGGG 59.509 38.462 0.00 0.00 32.52 4.96
5136 6356 7.514784 TCTTTGAGCATTGATATACATTGGG 57.485 36.000 0.00 0.00 32.52 4.12
5137 6357 9.976511 AAATCTTTGAGCATTGATATACATTGG 57.023 29.630 0.00 0.00 32.52 3.16
5192 6412 0.581053 CCAAACACAAAACATGCCGC 59.419 50.000 0.00 0.00 0.00 6.53
5246 6466 9.558396 TGGTTGAGCTTTCATTCATAAATTTTT 57.442 25.926 0.00 0.00 0.00 1.94
5247 6467 9.211485 CTGGTTGAGCTTTCATTCATAAATTTT 57.789 29.630 0.00 0.00 0.00 1.82
5248 6468 8.587608 TCTGGTTGAGCTTTCATTCATAAATTT 58.412 29.630 0.00 0.00 0.00 1.82
5249 6469 8.125978 TCTGGTTGAGCTTTCATTCATAAATT 57.874 30.769 0.00 0.00 0.00 1.82
5250 6470 7.707624 TCTGGTTGAGCTTTCATTCATAAAT 57.292 32.000 0.00 0.00 0.00 1.40
5251 6471 7.523293 TTCTGGTTGAGCTTTCATTCATAAA 57.477 32.000 0.00 0.00 0.00 1.40
5252 6472 7.523293 TTTCTGGTTGAGCTTTCATTCATAA 57.477 32.000 0.00 0.00 0.00 1.90
5253 6473 7.448161 TCTTTTCTGGTTGAGCTTTCATTCATA 59.552 33.333 0.00 0.00 0.00 2.15
5254 6474 6.266103 TCTTTTCTGGTTGAGCTTTCATTCAT 59.734 34.615 0.00 0.00 0.00 2.57
5255 6475 5.593909 TCTTTTCTGGTTGAGCTTTCATTCA 59.406 36.000 0.00 0.00 0.00 2.57
5256 6476 6.076981 TCTTTTCTGGTTGAGCTTTCATTC 57.923 37.500 0.00 0.00 0.00 2.67
5257 6477 5.010415 CCTCTTTTCTGGTTGAGCTTTCATT 59.990 40.000 0.00 0.00 0.00 2.57
5258 6478 4.522022 CCTCTTTTCTGGTTGAGCTTTCAT 59.478 41.667 0.00 0.00 0.00 2.57
5259 6479 3.885297 CCTCTTTTCTGGTTGAGCTTTCA 59.115 43.478 0.00 0.00 0.00 2.69
5260 6480 3.885901 ACCTCTTTTCTGGTTGAGCTTTC 59.114 43.478 0.00 0.00 31.62 2.62
5261 6481 3.903467 ACCTCTTTTCTGGTTGAGCTTT 58.097 40.909 0.00 0.00 31.62 3.51
5262 6482 3.584733 ACCTCTTTTCTGGTTGAGCTT 57.415 42.857 0.00 0.00 31.62 3.74
5263 6483 3.584733 AACCTCTTTTCTGGTTGAGCT 57.415 42.857 0.00 0.00 44.02 4.09
5268 6488 4.519906 TTCTCCAACCTCTTTTCTGGTT 57.480 40.909 0.00 0.00 46.33 3.67
5269 6489 4.519906 TTTCTCCAACCTCTTTTCTGGT 57.480 40.909 0.00 0.00 38.35 4.00
5270 6490 5.133221 TCTTTTCTCCAACCTCTTTTCTGG 58.867 41.667 0.00 0.00 0.00 3.86
5271 6491 6.699575 TTCTTTTCTCCAACCTCTTTTCTG 57.300 37.500 0.00 0.00 0.00 3.02
5272 6492 6.892456 AGTTTCTTTTCTCCAACCTCTTTTCT 59.108 34.615 0.00 0.00 0.00 2.52
5273 6493 7.101652 AGTTTCTTTTCTCCAACCTCTTTTC 57.898 36.000 0.00 0.00 0.00 2.29
5274 6494 7.482169 AAGTTTCTTTTCTCCAACCTCTTTT 57.518 32.000 0.00 0.00 0.00 2.27
5275 6495 7.178451 TCAAAGTTTCTTTTCTCCAACCTCTTT 59.822 33.333 0.00 0.00 0.00 2.52
5276 6496 6.663523 TCAAAGTTTCTTTTCTCCAACCTCTT 59.336 34.615 0.00 0.00 0.00 2.85
5277 6497 6.187682 TCAAAGTTTCTTTTCTCCAACCTCT 58.812 36.000 0.00 0.00 0.00 3.69
5278 6498 6.451064 TCAAAGTTTCTTTTCTCCAACCTC 57.549 37.500 0.00 0.00 0.00 3.85
5279 6499 6.210584 TGTTCAAAGTTTCTTTTCTCCAACCT 59.789 34.615 0.00 0.00 0.00 3.50
5280 6500 6.394809 TGTTCAAAGTTTCTTTTCTCCAACC 58.605 36.000 0.00 0.00 0.00 3.77
5281 6501 7.883229 TTGTTCAAAGTTTCTTTTCTCCAAC 57.117 32.000 0.00 0.00 0.00 3.77
5282 6502 8.310382 TCATTGTTCAAAGTTTCTTTTCTCCAA 58.690 29.630 0.00 0.00 0.00 3.53
5283 6503 7.759433 GTCATTGTTCAAAGTTTCTTTTCTCCA 59.241 33.333 0.00 0.00 0.00 3.86
5284 6504 7.759433 TGTCATTGTTCAAAGTTTCTTTTCTCC 59.241 33.333 0.00 0.00 0.00 3.71
5285 6505 8.687824 TGTCATTGTTCAAAGTTTCTTTTCTC 57.312 30.769 0.00 0.00 0.00 2.87
5286 6506 9.487790 TTTGTCATTGTTCAAAGTTTCTTTTCT 57.512 25.926 0.00 0.00 0.00 2.52
5289 6509 9.487790 TCTTTTGTCATTGTTCAAAGTTTCTTT 57.512 25.926 8.69 0.00 35.47 2.52
5290 6510 9.143631 CTCTTTTGTCATTGTTCAAAGTTTCTT 57.856 29.630 8.69 0.00 35.47 2.52
5291 6511 8.306761 ACTCTTTTGTCATTGTTCAAAGTTTCT 58.693 29.630 8.69 0.00 35.47 2.52
5292 6512 8.466086 ACTCTTTTGTCATTGTTCAAAGTTTC 57.534 30.769 8.69 0.00 35.47 2.78
5293 6513 8.087750 TGACTCTTTTGTCATTGTTCAAAGTTT 58.912 29.630 0.00 0.00 41.43 2.66
5321 6541 9.102757 GCATTGAACTTTCTGTGATAGAATAGA 57.897 33.333 0.00 0.00 44.54 1.98
5322 6542 9.107177 AGCATTGAACTTTCTGTGATAGAATAG 57.893 33.333 0.00 0.00 44.54 1.73
5324 6544 7.934855 AGCATTGAACTTTCTGTGATAGAAT 57.065 32.000 0.00 0.00 44.54 2.40
5325 6545 7.334421 GGTAGCATTGAACTTTCTGTGATAGAA 59.666 37.037 0.00 0.00 43.53 2.10
5326 6546 6.818644 GGTAGCATTGAACTTTCTGTGATAGA 59.181 38.462 0.00 0.00 0.00 1.98
5327 6547 6.595326 TGGTAGCATTGAACTTTCTGTGATAG 59.405 38.462 0.00 0.00 0.00 2.08
5328 6548 6.472016 TGGTAGCATTGAACTTTCTGTGATA 58.528 36.000 0.00 0.00 0.00 2.15
5329 6549 5.316167 TGGTAGCATTGAACTTTCTGTGAT 58.684 37.500 0.00 0.00 0.00 3.06
5330 6550 4.713553 TGGTAGCATTGAACTTTCTGTGA 58.286 39.130 0.00 0.00 0.00 3.58
5331 6551 4.516698 ACTGGTAGCATTGAACTTTCTGTG 59.483 41.667 0.00 0.00 0.00 3.66
5332 6552 4.516698 CACTGGTAGCATTGAACTTTCTGT 59.483 41.667 6.42 0.00 0.00 3.41
5333 6553 4.756642 TCACTGGTAGCATTGAACTTTCTG 59.243 41.667 12.03 0.00 0.00 3.02
5334 6554 4.973168 TCACTGGTAGCATTGAACTTTCT 58.027 39.130 12.03 0.00 0.00 2.52
5335 6555 5.689383 TTCACTGGTAGCATTGAACTTTC 57.311 39.130 19.97 0.00 0.00 2.62
5346 6607 7.770801 AATTTCAAAAACTTTCACTGGTAGC 57.229 32.000 0.00 0.00 0.00 3.58
5372 6635 9.507329 CTTACATTTTGGATGTATACATAGCCT 57.493 33.333 18.28 0.00 36.57 4.58
5420 6720 8.585018 CCCCTGTTTTGTTCTTCAGTTTAATAT 58.415 33.333 0.00 0.00 0.00 1.28
5422 6722 6.609616 TCCCCTGTTTTGTTCTTCAGTTTAAT 59.390 34.615 0.00 0.00 0.00 1.40
5440 6740 1.761780 TTCTCTCCCCCTTCCCCTGT 61.762 60.000 0.00 0.00 0.00 4.00
5480 6780 7.062605 CACTTTGCATCATTCTTTCGCTTTATT 59.937 33.333 0.00 0.00 0.00 1.40
5482 6782 5.858049 CACTTTGCATCATTCTTTCGCTTTA 59.142 36.000 0.00 0.00 0.00 1.85
5483 6783 4.682860 CACTTTGCATCATTCTTTCGCTTT 59.317 37.500 0.00 0.00 0.00 3.51
5484 6784 4.232221 CACTTTGCATCATTCTTTCGCTT 58.768 39.130 0.00 0.00 0.00 4.68
5509 6809 6.484643 TCTGTTTCTTGGCAGCAGATTATATC 59.515 38.462 0.00 0.00 32.09 1.63
5514 6814 2.818432 CTCTGTTTCTTGGCAGCAGATT 59.182 45.455 0.00 0.00 35.91 2.40
5544 6844 1.998315 GACATGCTATGCAGGCGATAG 59.002 52.381 4.08 0.00 44.57 2.08
5545 6845 1.344114 TGACATGCTATGCAGGCGATA 59.656 47.619 4.08 0.00 44.57 2.92
5546 6846 0.107268 TGACATGCTATGCAGGCGAT 59.893 50.000 4.08 2.94 44.57 4.58
5547 6847 0.107752 TTGACATGCTATGCAGGCGA 60.108 50.000 4.08 0.00 44.57 5.54
5549 6849 3.754850 TCATATTGACATGCTATGCAGGC 59.245 43.478 4.08 7.40 44.57 4.85
5550 6850 6.510879 AATCATATTGACATGCTATGCAGG 57.489 37.500 2.59 2.59 46.22 4.85
5574 6882 7.935338 CACTTTATGTGTTTCAATTCAAGCT 57.065 32.000 0.00 0.00 41.53 3.74
5599 6907 5.941948 TGCAGATCAATAGATTGCTCATG 57.058 39.130 8.39 0.00 38.23 3.07
5600 6908 7.119407 GTGTATGCAGATCAATAGATTGCTCAT 59.881 37.037 8.39 5.07 38.23 2.90
5602 6910 6.426025 TGTGTATGCAGATCAATAGATTGCTC 59.574 38.462 0.00 0.00 38.23 4.26
5603 6911 6.293698 TGTGTATGCAGATCAATAGATTGCT 58.706 36.000 0.00 0.00 38.23 3.91
5604 6912 6.549912 TGTGTATGCAGATCAATAGATTGC 57.450 37.500 0.00 0.00 38.06 3.56
5605 6913 8.780249 TCAATGTGTATGCAGATCAATAGATTG 58.220 33.333 0.00 0.00 39.10 2.67
5606 6914 8.913487 TCAATGTGTATGCAGATCAATAGATT 57.087 30.769 0.00 0.00 33.72 2.40
5607 6915 9.163899 GATCAATGTGTATGCAGATCAATAGAT 57.836 33.333 0.00 0.00 37.13 1.98
5608 6916 7.330208 CGATCAATGTGTATGCAGATCAATAGA 59.670 37.037 10.08 2.18 33.33 1.98
5609 6917 7.453838 CGATCAATGTGTATGCAGATCAATAG 58.546 38.462 10.08 0.00 33.33 1.73
5610 6918 6.128472 GCGATCAATGTGTATGCAGATCAATA 60.128 38.462 10.08 0.00 33.33 1.90
5611 6919 5.334646 GCGATCAATGTGTATGCAGATCAAT 60.335 40.000 10.08 1.27 33.33 2.57
5612 6920 4.024641 GCGATCAATGTGTATGCAGATCAA 60.025 41.667 10.08 0.00 33.33 2.57
5613 6921 3.495753 GCGATCAATGTGTATGCAGATCA 59.504 43.478 10.08 1.43 33.33 2.92
5614 6922 3.744942 AGCGATCAATGTGTATGCAGATC 59.255 43.478 0.00 0.00 0.00 2.75
5615 6923 3.736720 AGCGATCAATGTGTATGCAGAT 58.263 40.909 0.00 0.00 0.00 2.90
5616 6924 3.183793 AGCGATCAATGTGTATGCAGA 57.816 42.857 0.00 0.00 0.00 4.26
5617 6925 3.957671 AAGCGATCAATGTGTATGCAG 57.042 42.857 0.00 0.00 0.00 4.41
5618 6926 3.181498 CCAAAGCGATCAATGTGTATGCA 60.181 43.478 0.00 0.00 0.00 3.96
5619 6927 3.065233 TCCAAAGCGATCAATGTGTATGC 59.935 43.478 0.00 0.00 0.00 3.14
5620 6928 4.880886 TCCAAAGCGATCAATGTGTATG 57.119 40.909 0.00 0.00 0.00 2.39
5621 6929 5.895636 TTTCCAAAGCGATCAATGTGTAT 57.104 34.783 0.00 0.00 0.00 2.29
5622 6930 5.895636 ATTTCCAAAGCGATCAATGTGTA 57.104 34.783 0.00 0.00 0.00 2.90
5623 6931 4.789012 ATTTCCAAAGCGATCAATGTGT 57.211 36.364 0.00 0.00 0.00 3.72
5624 6932 6.237648 GCTAAATTTCCAAAGCGATCAATGTG 60.238 38.462 0.00 0.00 0.00 3.21
5625 6933 5.807011 GCTAAATTTCCAAAGCGATCAATGT 59.193 36.000 0.00 0.00 0.00 2.71
5626 6934 5.806502 TGCTAAATTTCCAAAGCGATCAATG 59.193 36.000 0.00 0.00 37.80 2.82
5627 6935 5.964758 TGCTAAATTTCCAAAGCGATCAAT 58.035 33.333 0.00 0.00 37.80 2.57
5628 6936 5.384063 TGCTAAATTTCCAAAGCGATCAA 57.616 34.783 0.00 0.00 37.80 2.57
5629 6937 5.581126 ATGCTAAATTTCCAAAGCGATCA 57.419 34.783 0.00 0.00 37.80 2.92
5630 6938 6.145535 CCTATGCTAAATTTCCAAAGCGATC 58.854 40.000 0.00 0.00 37.80 3.69
5631 6939 5.010012 CCCTATGCTAAATTTCCAAAGCGAT 59.990 40.000 0.00 0.00 37.80 4.58
5632 6940 4.338118 CCCTATGCTAAATTTCCAAAGCGA 59.662 41.667 0.00 0.00 37.80 4.93
5633 6941 4.610945 CCCTATGCTAAATTTCCAAAGCG 58.389 43.478 0.00 0.00 37.80 4.68
5634 6942 4.141959 TGCCCTATGCTAAATTTCCAAAGC 60.142 41.667 0.00 0.00 42.00 3.51
5635 6943 5.596836 TGCCCTATGCTAAATTTCCAAAG 57.403 39.130 0.00 0.00 42.00 2.77
5636 6944 6.365970 TTTGCCCTATGCTAAATTTCCAAA 57.634 33.333 0.00 0.00 42.00 3.28
5637 6945 6.558488 ATTTGCCCTATGCTAAATTTCCAA 57.442 33.333 0.00 0.00 38.19 3.53
5638 6946 6.838612 ACTATTTGCCCTATGCTAAATTTCCA 59.161 34.615 0.00 0.00 38.19 3.53
5639 6947 7.290110 ACTATTTGCCCTATGCTAAATTTCC 57.710 36.000 0.00 0.00 38.19 3.13
5640 6948 7.653311 CCAACTATTTGCCCTATGCTAAATTTC 59.347 37.037 0.00 0.00 38.19 2.17
5641 6949 7.344352 TCCAACTATTTGCCCTATGCTAAATTT 59.656 33.333 0.00 0.00 38.19 1.82
5642 6950 6.838612 TCCAACTATTTGCCCTATGCTAAATT 59.161 34.615 0.00 0.00 38.19 1.82
5643 6951 6.372931 TCCAACTATTTGCCCTATGCTAAAT 58.627 36.000 0.00 0.00 38.19 1.40
5644 6952 5.761205 TCCAACTATTTGCCCTATGCTAAA 58.239 37.500 0.00 0.00 38.19 1.85
5645 6953 5.381184 TCCAACTATTTGCCCTATGCTAA 57.619 39.130 0.00 0.00 42.00 3.09
5646 6954 5.381184 TTCCAACTATTTGCCCTATGCTA 57.619 39.130 0.00 0.00 42.00 3.49
5647 6955 3.951563 TCCAACTATTTGCCCTATGCT 57.048 42.857 0.00 0.00 42.00 3.79
5648 6956 5.535753 ATTTCCAACTATTTGCCCTATGC 57.464 39.130 0.00 0.00 41.77 3.14
5649 6957 6.549364 TGGTATTTCCAACTATTTGCCCTATG 59.451 38.462 0.00 0.00 44.12 2.23
5650 6958 6.678547 TGGTATTTCCAACTATTTGCCCTAT 58.321 36.000 0.00 0.00 44.12 2.57
5651 6959 6.080969 TGGTATTTCCAACTATTTGCCCTA 57.919 37.500 0.00 0.00 44.12 3.53
5652 6960 4.941713 TGGTATTTCCAACTATTTGCCCT 58.058 39.130 0.00 0.00 44.12 5.19
5664 6972 5.860941 TGCTTTCACTTTTGGTATTTCCA 57.139 34.783 0.00 0.00 45.60 3.53
5665 6973 5.120674 GCATGCTTTCACTTTTGGTATTTCC 59.879 40.000 11.37 0.00 0.00 3.13
5666 6974 5.120674 GGCATGCTTTCACTTTTGGTATTTC 59.879 40.000 18.92 0.00 0.00 2.17
5667 6975 4.996758 GGCATGCTTTCACTTTTGGTATTT 59.003 37.500 18.92 0.00 0.00 1.40
5668 6976 4.040217 TGGCATGCTTTCACTTTTGGTATT 59.960 37.500 18.92 0.00 0.00 1.89
5669 6977 3.577848 TGGCATGCTTTCACTTTTGGTAT 59.422 39.130 18.92 0.00 0.00 2.73
5670 6978 2.961741 TGGCATGCTTTCACTTTTGGTA 59.038 40.909 18.92 0.00 0.00 3.25
5671 6979 1.761784 TGGCATGCTTTCACTTTTGGT 59.238 42.857 18.92 0.00 0.00 3.67
5672 6980 2.529780 TGGCATGCTTTCACTTTTGG 57.470 45.000 18.92 0.00 0.00 3.28
5673 6981 5.466058 TGTAAATGGCATGCTTTCACTTTTG 59.534 36.000 18.92 0.00 0.00 2.44
5674 6982 5.466393 GTGTAAATGGCATGCTTTCACTTTT 59.534 36.000 18.92 12.62 0.00 2.27
5675 6983 4.990426 GTGTAAATGGCATGCTTTCACTTT 59.010 37.500 18.92 11.33 0.00 2.66
5676 6984 4.281688 AGTGTAAATGGCATGCTTTCACTT 59.718 37.500 18.92 6.01 31.02 3.16
5677 6985 3.828451 AGTGTAAATGGCATGCTTTCACT 59.172 39.130 18.92 18.67 0.00 3.41
5678 6986 3.922240 CAGTGTAAATGGCATGCTTTCAC 59.078 43.478 18.92 16.85 0.00 3.18
5679 6987 3.614630 GCAGTGTAAATGGCATGCTTTCA 60.615 43.478 18.92 7.69 28.90 2.69
5680 6988 2.925563 GCAGTGTAAATGGCATGCTTTC 59.074 45.455 18.92 0.95 28.90 2.62
5681 6989 2.963432 GCAGTGTAAATGGCATGCTTT 58.037 42.857 18.92 13.56 28.90 3.51
5682 6990 2.660189 GCAGTGTAAATGGCATGCTT 57.340 45.000 18.92 6.78 28.90 3.91
5697 7005 2.539476 CTTTTCTTTTTGCACGGCAGT 58.461 42.857 0.00 0.00 40.61 4.40
5698 7006 1.860326 CCTTTTCTTTTTGCACGGCAG 59.140 47.619 0.00 0.00 40.61 4.85
5699 7007 1.478510 TCCTTTTCTTTTTGCACGGCA 59.521 42.857 0.00 0.00 36.47 5.69
5700 7008 2.217429 TCCTTTTCTTTTTGCACGGC 57.783 45.000 0.00 0.00 0.00 5.68
5701 7009 5.538067 TTTTTCCTTTTCTTTTTGCACGG 57.462 34.783 0.00 0.00 0.00 4.94
5702 7010 6.541969 ACATTTTTCCTTTTCTTTTTGCACG 58.458 32.000 0.00 0.00 0.00 5.34
5721 7029 6.976925 GCACGTTACCTGATACTAGTACATTT 59.023 38.462 4.31 0.00 0.00 2.32
5723 7031 5.826737 AGCACGTTACCTGATACTAGTACAT 59.173 40.000 4.31 0.00 0.00 2.29
5725 7033 5.747951 AGCACGTTACCTGATACTAGTAC 57.252 43.478 4.31 0.35 0.00 2.73
5728 7036 4.215827 CCCTAGCACGTTACCTGATACTAG 59.784 50.000 0.00 0.00 0.00 2.57
5730 7038 2.957006 CCCTAGCACGTTACCTGATACT 59.043 50.000 0.00 0.00 0.00 2.12
5732 7040 2.954318 GTCCCTAGCACGTTACCTGATA 59.046 50.000 0.00 0.00 0.00 2.15
5733 7041 1.755380 GTCCCTAGCACGTTACCTGAT 59.245 52.381 0.00 0.00 0.00 2.90
5734 7042 1.180029 GTCCCTAGCACGTTACCTGA 58.820 55.000 0.00 0.00 0.00 3.86
5735 7043 0.892755 TGTCCCTAGCACGTTACCTG 59.107 55.000 0.00 0.00 0.00 4.00
5736 7044 1.183549 CTGTCCCTAGCACGTTACCT 58.816 55.000 0.00 0.00 0.00 3.08
5737 7045 0.175073 CCTGTCCCTAGCACGTTACC 59.825 60.000 0.00 0.00 0.00 2.85
5738 7046 0.175073 CCCTGTCCCTAGCACGTTAC 59.825 60.000 0.00 0.00 0.00 2.50
5739 7047 0.974010 CCCCTGTCCCTAGCACGTTA 60.974 60.000 0.00 0.00 0.00 3.18
5740 7048 2.291043 CCCCTGTCCCTAGCACGTT 61.291 63.158 0.00 0.00 0.00 3.99
5741 7049 2.683933 CCCCTGTCCCTAGCACGT 60.684 66.667 0.00 0.00 0.00 4.49
5743 7051 1.911702 GAACCCCCTGTCCCTAGCAC 61.912 65.000 0.00 0.00 0.00 4.40
5744 7052 1.615424 GAACCCCCTGTCCCTAGCA 60.615 63.158 0.00 0.00 0.00 3.49
5745 7053 0.988678 ATGAACCCCCTGTCCCTAGC 60.989 60.000 0.00 0.00 0.00 3.42
5746 7054 2.330216 CTATGAACCCCCTGTCCCTAG 58.670 57.143 0.00 0.00 0.00 3.02
5748 7056 0.421904 ACTATGAACCCCCTGTCCCT 59.578 55.000 0.00 0.00 0.00 4.20
5749 7057 1.212195 GAACTATGAACCCCCTGTCCC 59.788 57.143 0.00 0.00 0.00 4.46
5750 7058 1.913419 TGAACTATGAACCCCCTGTCC 59.087 52.381 0.00 0.00 0.00 4.02
5751 7059 2.838202 TCTGAACTATGAACCCCCTGTC 59.162 50.000 0.00 0.00 0.00 3.51
5753 7061 3.878778 CTTCTGAACTATGAACCCCCTG 58.121 50.000 0.00 0.00 0.00 4.45
5754 7062 2.239907 GCTTCTGAACTATGAACCCCCT 59.760 50.000 0.00 0.00 0.00 4.79
5755 7063 2.026262 TGCTTCTGAACTATGAACCCCC 60.026 50.000 0.00 0.00 0.00 5.40
5756 7064 3.350219 TGCTTCTGAACTATGAACCCC 57.650 47.619 0.00 0.00 0.00 4.95
5757 7065 3.127721 GCTTGCTTCTGAACTATGAACCC 59.872 47.826 0.00 0.00 0.00 4.11
5759 7067 5.448360 GGATGCTTGCTTCTGAACTATGAAC 60.448 44.000 8.11 0.00 0.00 3.18
5761 7069 4.194640 GGATGCTTGCTTCTGAACTATGA 58.805 43.478 8.11 0.00 0.00 2.15
5762 7070 3.943381 TGGATGCTTGCTTCTGAACTATG 59.057 43.478 8.11 0.00 0.00 2.23
5764 7072 3.244526 TGTGGATGCTTGCTTCTGAACTA 60.245 43.478 8.11 0.00 0.00 2.24
5765 7073 2.157738 GTGGATGCTTGCTTCTGAACT 58.842 47.619 8.11 0.00 0.00 3.01
5766 7074 1.881973 TGTGGATGCTTGCTTCTGAAC 59.118 47.619 8.11 5.85 0.00 3.18
5769 7077 1.241165 TGTGTGGATGCTTGCTTCTG 58.759 50.000 8.11 0.00 0.00 3.02
5770 7078 1.985473 TTGTGTGGATGCTTGCTTCT 58.015 45.000 8.11 0.00 0.00 2.85
5771 7079 2.223782 TGTTTGTGTGGATGCTTGCTTC 60.224 45.455 0.57 0.57 0.00 3.86
5772 7080 1.755959 TGTTTGTGTGGATGCTTGCTT 59.244 42.857 0.00 0.00 0.00 3.91
5773 7081 1.067516 GTGTTTGTGTGGATGCTTGCT 59.932 47.619 0.00 0.00 0.00 3.91
5774 7082 1.490621 GTGTTTGTGTGGATGCTTGC 58.509 50.000 0.00 0.00 0.00 4.01
5775 7083 1.408340 TGGTGTTTGTGTGGATGCTTG 59.592 47.619 0.00 0.00 0.00 4.01
5777 7085 1.774110 TTGGTGTTTGTGTGGATGCT 58.226 45.000 0.00 0.00 0.00 3.79
5778 7086 2.818130 ATTGGTGTTTGTGTGGATGC 57.182 45.000 0.00 0.00 0.00 3.91
5779 7087 5.170021 CCATAATTGGTGTTTGTGTGGATG 58.830 41.667 0.00 0.00 38.30 3.51
5781 7089 3.006323 GCCATAATTGGTGTTTGTGTGGA 59.994 43.478 0.00 0.00 45.57 4.02
5783 7091 3.987547 TGCCATAATTGGTGTTTGTGTG 58.012 40.909 0.00 0.00 45.57 3.82
5784 7092 4.630111 CTTGCCATAATTGGTGTTTGTGT 58.370 39.130 0.00 0.00 45.57 3.72
5785 7093 3.432933 GCTTGCCATAATTGGTGTTTGTG 59.567 43.478 0.00 0.00 45.57 3.33
5786 7094 3.070734 TGCTTGCCATAATTGGTGTTTGT 59.929 39.130 0.00 0.00 45.57 2.83
5787 7095 3.661944 TGCTTGCCATAATTGGTGTTTG 58.338 40.909 0.00 0.00 45.57 2.93
5788 7096 4.556592 ATGCTTGCCATAATTGGTGTTT 57.443 36.364 0.00 0.00 45.57 2.83
5789 7097 4.506758 GAATGCTTGCCATAATTGGTGTT 58.493 39.130 0.00 0.00 45.57 3.32
5791 7099 3.460103 GGAATGCTTGCCATAATTGGTG 58.540 45.455 0.00 0.00 45.57 4.17
5792 7100 2.435437 GGGAATGCTTGCCATAATTGGT 59.565 45.455 0.00 0.00 45.57 3.67
5794 7102 2.435069 TGGGGAATGCTTGCCATAATTG 59.565 45.455 0.00 0.00 43.95 2.32
5796 7104 2.475339 TGGGGAATGCTTGCCATAAT 57.525 45.000 0.00 0.00 43.95 1.28
5798 7106 1.481055 GGATGGGGAATGCTTGCCATA 60.481 52.381 0.00 0.00 43.95 2.74
5799 7107 0.761702 GGATGGGGAATGCTTGCCAT 60.762 55.000 0.00 0.00 43.95 4.40
5800 7108 1.381599 GGATGGGGAATGCTTGCCA 60.382 57.895 0.00 0.00 43.95 4.92
5801 7109 2.136229 GGGATGGGGAATGCTTGCC 61.136 63.158 0.00 0.00 40.98 4.52
5802 7110 1.381599 TGGGATGGGGAATGCTTGC 60.382 57.895 0.00 0.00 0.00 4.01
5803 7111 0.324552 TGTGGGATGGGGAATGCTTG 60.325 55.000 0.00 0.00 0.00 4.01
5804 7112 0.413037 TTGTGGGATGGGGAATGCTT 59.587 50.000 0.00 0.00 0.00 3.91
5805 7113 0.324645 GTTGTGGGATGGGGAATGCT 60.325 55.000 0.00 0.00 0.00 3.79
5806 7114 0.614415 TGTTGTGGGATGGGGAATGC 60.614 55.000 0.00 0.00 0.00 3.56
5807 7115 1.935799 TTGTTGTGGGATGGGGAATG 58.064 50.000 0.00 0.00 0.00 2.67
5808 7116 2.469952 CATTGTTGTGGGATGGGGAAT 58.530 47.619 0.00 0.00 0.00 3.01
5810 7118 0.040942 CCATTGTTGTGGGATGGGGA 59.959 55.000 0.00 0.00 37.31 4.81
5811 7119 0.040942 TCCATTGTTGTGGGATGGGG 59.959 55.000 2.12 0.00 40.55 4.96
5812 7120 1.272648 ACTCCATTGTTGTGGGATGGG 60.273 52.381 2.12 0.00 40.55 4.00
5813 7121 2.220653 ACTCCATTGTTGTGGGATGG 57.779 50.000 0.00 0.00 41.32 3.51
5814 7122 4.588899 TCTAACTCCATTGTTGTGGGATG 58.411 43.478 0.00 0.00 39.80 3.51
5815 7123 4.927267 TCTAACTCCATTGTTGTGGGAT 57.073 40.909 0.00 0.00 39.80 3.85
5816 7124 4.927267 ATCTAACTCCATTGTTGTGGGA 57.073 40.909 0.00 0.00 39.80 4.37
5817 7125 5.009010 GCATATCTAACTCCATTGTTGTGGG 59.991 44.000 0.00 0.00 39.80 4.61
5818 7126 5.589855 TGCATATCTAACTCCATTGTTGTGG 59.410 40.000 0.00 0.00 40.76 4.17
5819 7127 6.317140 ACTGCATATCTAACTCCATTGTTGTG 59.683 38.462 0.00 0.00 0.00 3.33
5821 7129 6.539826 TGACTGCATATCTAACTCCATTGTTG 59.460 38.462 0.00 0.00 0.00 3.33
5822 7130 6.653020 TGACTGCATATCTAACTCCATTGTT 58.347 36.000 0.00 0.00 0.00 2.83
5823 7131 6.098838 TCTGACTGCATATCTAACTCCATTGT 59.901 38.462 0.00 0.00 0.00 2.71
5825 7133 6.737720 TCTGACTGCATATCTAACTCCATT 57.262 37.500 0.00 0.00 0.00 3.16
5826 7134 6.737720 TTCTGACTGCATATCTAACTCCAT 57.262 37.500 0.00 0.00 0.00 3.41
5827 7135 5.452496 GCTTCTGACTGCATATCTAACTCCA 60.452 44.000 0.00 0.00 0.00 3.86
5828 7136 4.987912 GCTTCTGACTGCATATCTAACTCC 59.012 45.833 0.00 0.00 0.00 3.85
5829 7137 5.595885 TGCTTCTGACTGCATATCTAACTC 58.404 41.667 0.00 0.00 33.94 3.01
5830 7138 5.599732 CTGCTTCTGACTGCATATCTAACT 58.400 41.667 5.22 0.00 38.59 2.24
5831 7139 4.210955 GCTGCTTCTGACTGCATATCTAAC 59.789 45.833 5.22 0.00 38.59 2.34
5834 7142 2.169978 TGCTGCTTCTGACTGCATATCT 59.830 45.455 0.00 0.00 38.59 1.98
5835 7143 2.558378 TGCTGCTTCTGACTGCATATC 58.442 47.619 0.00 0.00 38.59 1.63
5836 7144 2.704464 TGCTGCTTCTGACTGCATAT 57.296 45.000 0.00 0.00 38.59 1.78
5837 7145 2.477845 TTGCTGCTTCTGACTGCATA 57.522 45.000 0.00 0.00 40.91 3.14
5839 7147 0.879090 CATTGCTGCTTCTGACTGCA 59.121 50.000 0.00 4.77 39.78 4.41
5840 7148 0.456312 GCATTGCTGCTTCTGACTGC 60.456 55.000 0.16 0.00 45.32 4.40
5841 7149 3.696782 GCATTGCTGCTTCTGACTG 57.303 52.632 0.16 0.00 45.32 3.51
5851 7159 2.177531 GGTCGTGCTGCATTGCTG 59.822 61.111 5.27 10.68 0.00 4.41
5853 7161 3.332493 CTGGGTCGTGCTGCATTGC 62.332 63.158 5.27 0.46 0.00 3.56
5854 7162 1.968017 ACTGGGTCGTGCTGCATTG 60.968 57.895 5.27 1.61 0.00 2.82
5855 7163 1.968017 CACTGGGTCGTGCTGCATT 60.968 57.895 5.27 0.00 0.00 3.56
5856 7164 2.359107 CACTGGGTCGTGCTGCAT 60.359 61.111 5.27 0.00 0.00 3.96
5857 7165 4.624364 CCACTGGGTCGTGCTGCA 62.624 66.667 0.00 0.00 33.60 4.41
5858 7166 3.825160 TTCCACTGGGTCGTGCTGC 62.825 63.158 0.00 0.00 33.60 5.25
5859 7167 1.961277 GTTCCACTGGGTCGTGCTG 60.961 63.158 0.00 0.00 33.60 4.41
5861 7169 1.961277 CTGTTCCACTGGGTCGTGC 60.961 63.158 0.00 0.00 33.60 5.34
5864 7172 0.105964 TTCACTGTTCCACTGGGTCG 59.894 55.000 0.00 0.00 34.93 4.79
5865 7173 1.141053 AGTTCACTGTTCCACTGGGTC 59.859 52.381 0.00 0.00 34.93 4.46
5866 7174 1.213296 AGTTCACTGTTCCACTGGGT 58.787 50.000 0.00 0.00 34.93 4.51
5867 7175 2.632996 TCTAGTTCACTGTTCCACTGGG 59.367 50.000 0.00 0.00 0.00 4.45
5868 7176 4.058817 GTTCTAGTTCACTGTTCCACTGG 58.941 47.826 0.00 0.00 0.00 4.00
5870 7178 5.279056 GCTAGTTCTAGTTCACTGTTCCACT 60.279 44.000 8.38 0.00 0.00 4.00
5873 7181 4.021368 TGGCTAGTTCTAGTTCACTGTTCC 60.021 45.833 8.38 0.00 0.00 3.62
5874 7182 5.135508 TGGCTAGTTCTAGTTCACTGTTC 57.864 43.478 8.38 0.00 0.00 3.18
5875 7183 5.546621 TTGGCTAGTTCTAGTTCACTGTT 57.453 39.130 8.38 0.00 0.00 3.16
5877 7185 5.177696 GTGTTTGGCTAGTTCTAGTTCACTG 59.822 44.000 8.38 0.00 0.00 3.66
5880 7188 4.504340 GGGTGTTTGGCTAGTTCTAGTTCA 60.504 45.833 8.38 5.27 0.00 3.18
5881 7189 4.001652 GGGTGTTTGGCTAGTTCTAGTTC 58.998 47.826 8.38 3.16 0.00 3.01
5883 7191 2.976882 TGGGTGTTTGGCTAGTTCTAGT 59.023 45.455 8.38 0.00 0.00 2.57
5884 7192 3.695830 TGGGTGTTTGGCTAGTTCTAG 57.304 47.619 2.80 2.80 0.00 2.43
5886 7194 2.489073 CCTTGGGTGTTTGGCTAGTTCT 60.489 50.000 0.00 0.00 0.00 3.01
5888 7196 1.497286 TCCTTGGGTGTTTGGCTAGTT 59.503 47.619 0.00 0.00 0.00 2.24
5889 7197 1.145571 TCCTTGGGTGTTTGGCTAGT 58.854 50.000 0.00 0.00 0.00 2.57
5890 7198 2.162681 CTTCCTTGGGTGTTTGGCTAG 58.837 52.381 0.00 0.00 0.00 3.42
5891 7199 1.203001 CCTTCCTTGGGTGTTTGGCTA 60.203 52.381 0.00 0.00 0.00 3.93
5892 7200 0.469892 CCTTCCTTGGGTGTTTGGCT 60.470 55.000 0.00 0.00 0.00 4.75
5893 7201 0.469144 TCCTTCCTTGGGTGTTTGGC 60.469 55.000 0.00 0.00 0.00 4.52
5894 7202 1.963515 CTTCCTTCCTTGGGTGTTTGG 59.036 52.381 0.00 0.00 0.00 3.28
5895 7203 1.341209 GCTTCCTTCCTTGGGTGTTTG 59.659 52.381 0.00 0.00 0.00 2.93
5896 7204 1.217942 AGCTTCCTTCCTTGGGTGTTT 59.782 47.619 0.00 0.00 0.00 2.83
5898 7206 0.402121 GAGCTTCCTTCCTTGGGTGT 59.598 55.000 0.00 0.00 0.00 4.16
5899 7207 0.401738 TGAGCTTCCTTCCTTGGGTG 59.598 55.000 0.00 0.00 0.00 4.61
5900 7208 0.695347 CTGAGCTTCCTTCCTTGGGT 59.305 55.000 0.00 0.00 0.00 4.51
5901 7209 0.695347 ACTGAGCTTCCTTCCTTGGG 59.305 55.000 0.00 0.00 0.00 4.12
5902 7210 1.349026 TGACTGAGCTTCCTTCCTTGG 59.651 52.381 0.00 0.00 0.00 3.61
5903 7211 2.614987 CCTGACTGAGCTTCCTTCCTTG 60.615 54.545 0.00 0.00 0.00 3.61
5904 7212 1.627834 CCTGACTGAGCTTCCTTCCTT 59.372 52.381 0.00 0.00 0.00 3.36
5905 7213 1.203237 TCCTGACTGAGCTTCCTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
5906 7214 1.270907 TCCTGACTGAGCTTCCTTCC 58.729 55.000 0.00 0.00 0.00 3.46
5907 7215 3.625649 ATTCCTGACTGAGCTTCCTTC 57.374 47.619 0.00 0.00 0.00 3.46
5910 7218 5.091261 TCTTTATTCCTGACTGAGCTTCC 57.909 43.478 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.