Multiple sequence alignment - TraesCS7D01G005400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G005400 chr7D 100.000 6963 0 0 1 6963 2612522 2605560 0.000000e+00 12859.0
1 TraesCS7D01G005400 chr7D 86.576 3449 365 63 2563 5966 3787018 3783623 0.000000e+00 3714.0
2 TraesCS7D01G005400 chr7D 86.085 3428 379 62 2587 5966 3633199 3629822 0.000000e+00 3598.0
3 TraesCS7D01G005400 chr7D 85.570 3375 376 68 2633 5966 2357659 2354355 0.000000e+00 3432.0
4 TraesCS7D01G005400 chr7D 89.234 1254 93 17 1238 2484 3788339 3787121 0.000000e+00 1530.0
5 TraesCS7D01G005400 chr7D 90.749 681 54 7 6284 6963 3237037 3236365 0.000000e+00 900.0
6 TraesCS7D01G005400 chr7D 90.616 682 53 7 6284 6963 3221828 3221156 0.000000e+00 894.0
7 TraesCS7D01G005400 chr7D 83.113 983 148 16 3660 4634 2563033 2562061 0.000000e+00 880.0
8 TraesCS7D01G005400 chr7D 85.821 536 60 6 555 1074 2359830 2359295 7.890000e-154 555.0
9 TraesCS7D01G005400 chr7D 81.572 738 59 32 380 1088 3794427 3793738 7.950000e-149 538.0
10 TraesCS7D01G005400 chr7D 92.453 371 26 2 6439 6807 2560388 2560018 4.780000e-146 529.0
11 TraesCS7D01G005400 chr7D 84.153 183 5 9 6162 6340 2560592 2560430 9.350000e-34 156.0
12 TraesCS7D01G005400 chr7D 88.793 116 12 1 6683 6797 3298409 3298524 2.620000e-29 141.0
13 TraesCS7D01G005400 chr4A 86.452 3447 395 57 2565 5965 740579013 740582433 0.000000e+00 3712.0
14 TraesCS7D01G005400 chr4A 85.440 3441 402 64 2563 5966 741590368 741593746 0.000000e+00 3487.0
15 TraesCS7D01G005400 chr4A 88.889 2124 209 13 2565 4685 740455440 740453341 0.000000e+00 2590.0
16 TraesCS7D01G005400 chr4A 88.258 2044 223 15 2601 4634 739867599 739869635 0.000000e+00 2429.0
17 TraesCS7D01G005400 chr4A 86.984 2082 254 15 2563 4634 739652016 739654090 0.000000e+00 2327.0
18 TraesCS7D01G005400 chr4A 86.888 2082 256 15 2563 4634 742057295 742059369 0.000000e+00 2316.0
19 TraesCS7D01G005400 chr4A 87.089 2068 233 21 2577 4634 741815647 741813604 0.000000e+00 2309.0
20 TraesCS7D01G005400 chr4A 94.904 1413 40 8 1159 2566 741796017 741794632 0.000000e+00 2182.0
21 TraesCS7D01G005400 chr4A 86.181 2019 257 20 2633 4637 740019075 740017065 0.000000e+00 2163.0
22 TraesCS7D01G005400 chr4A 96.537 1155 38 1 1225 2379 741589005 741590157 0.000000e+00 1910.0
23 TraesCS7D01G005400 chr4A 93.819 1262 57 9 1238 2497 741485613 741484371 0.000000e+00 1879.0
24 TraesCS7D01G005400 chr4A 92.078 1338 86 18 1238 2566 739650643 739651969 0.000000e+00 1866.0
25 TraesCS7D01G005400 chr4A 92.097 1316 77 12 1274 2566 740456803 740455492 0.000000e+00 1829.0
26 TraesCS7D01G005400 chr4A 96.558 1104 36 1 1201 2304 740022174 740021073 0.000000e+00 1827.0
27 TraesCS7D01G005400 chr4A 91.548 1337 95 16 1238 2566 742055922 742057248 0.000000e+00 1827.0
28 TraesCS7D01G005400 chr4A 87.378 1331 131 23 1241 2566 739866234 739867532 0.000000e+00 1493.0
29 TraesCS7D01G005400 chr4A 88.353 1099 109 12 4876 5963 740016816 740015726 0.000000e+00 1303.0
30 TraesCS7D01G005400 chr4A 86.833 1124 120 14 4866 5982 740939941 740941043 0.000000e+00 1230.0
31 TraesCS7D01G005400 chr4A 87.885 1040 119 5 4928 5965 739869875 739870909 0.000000e+00 1216.0
32 TraesCS7D01G005400 chr4A 88.655 996 98 12 4928 5911 742133087 742134079 0.000000e+00 1199.0
33 TraesCS7D01G005400 chr4A 85.903 1135 125 19 4866 5982 740453211 740452094 0.000000e+00 1177.0
34 TraesCS7D01G005400 chr4A 86.965 1051 102 15 1540 2566 740577922 740578961 0.000000e+00 1149.0
35 TraesCS7D01G005400 chr4A 92.680 806 28 10 1764 2566 741817729 741816952 0.000000e+00 1133.0
36 TraesCS7D01G005400 chr4A 87.310 788 58 9 6185 6963 739871074 739871828 0.000000e+00 863.0
37 TraesCS7D01G005400 chr4A 81.538 975 104 47 162 1096 740457822 740456884 0.000000e+00 734.0
38 TraesCS7D01G005400 chr4A 92.469 478 34 2 6263 6738 741812007 741811530 0.000000e+00 682.0
39 TraesCS7D01G005400 chr4A 88.307 573 49 11 534 1090 741588162 741588732 0.000000e+00 671.0
40 TraesCS7D01G005400 chr4A 89.322 487 51 1 601 1086 740022713 740022227 1.660000e-170 610.0
41 TraesCS7D01G005400 chr4A 85.072 623 63 19 490 1090 740926725 740927339 5.970000e-170 608.0
42 TraesCS7D01G005400 chr4A 87.548 522 57 2 603 1123 740268916 740269430 1.290000e-166 597.0
43 TraesCS7D01G005400 chr4A 87.548 522 54 5 603 1123 740303069 740303580 1.670000e-165 593.0
44 TraesCS7D01G005400 chr4A 87.165 522 59 2 603 1123 740346321 740346835 2.800000e-163 586.0
45 TraesCS7D01G005400 chr4A 85.385 520 71 2 6233 6751 740941459 740941974 1.030000e-147 534.0
46 TraesCS7D01G005400 chr4A 85.750 400 46 5 6233 6628 739657363 739657755 5.030000e-111 412.0
47 TraesCS7D01G005400 chr4A 95.062 162 8 0 2405 2566 741590157 741590318 8.960000e-64 255.0
48 TraesCS7D01G005400 chr4A 81.404 285 37 7 6639 6913 742135595 742135873 1.180000e-52 219.0
49 TraesCS7D01G005400 chr4A 88.785 107 6 2 1089 1189 741588902 741589008 7.330000e-25 126.0
50 TraesCS7D01G005400 chr4A 95.588 68 2 1 1123 1189 740456882 740456815 2.660000e-19 108.0
51 TraesCS7D01G005400 chr4A 79.433 141 19 6 2316 2454 740021084 740020952 2.670000e-14 91.6
52 TraesCS7D01G005400 chr7A 88.107 2060 222 20 2587 4634 3208034 3205986 0.000000e+00 2425.0
53 TraesCS7D01G005400 chr7A 86.686 2073 255 19 2563 4625 3312607 3314668 0.000000e+00 2279.0
54 TraesCS7D01G005400 chr7A 85.939 2098 241 28 2579 4634 2117580 2115495 0.000000e+00 2191.0
55 TraesCS7D01G005400 chr7A 90.484 1240 102 8 1243 2472 3632936 3631703 0.000000e+00 1622.0
56 TraesCS7D01G005400 chr7A 87.547 1333 140 18 1241 2566 3311244 3312557 0.000000e+00 1519.0
57 TraesCS7D01G005400 chr7A 87.701 1057 109 15 4928 5966 2115265 2114212 0.000000e+00 1212.0
58 TraesCS7D01G005400 chr7A 87.453 1068 115 14 4928 5982 3205737 3204676 0.000000e+00 1212.0
59 TraesCS7D01G005400 chr7A 86.747 1079 113 19 4873 5928 3314896 3315967 0.000000e+00 1173.0
60 TraesCS7D01G005400 chr7A 84.000 775 80 27 350 1109 2002817 2002072 0.000000e+00 704.0
61 TraesCS7D01G005400 chr7A 87.308 520 61 3 588 1106 3634709 3634194 2.160000e-164 590.0
62 TraesCS7D01G005400 chr7A 81.364 220 29 9 63 280 2004271 2004062 1.200000e-37 169.0
63 TraesCS7D01G005400 chrUn 90.869 679 53 7 6286 6963 325095615 325094945 0.000000e+00 902.0
64 TraesCS7D01G005400 chrUn 90.749 681 54 8 6284 6963 340806355 340807027 0.000000e+00 900.0
65 TraesCS7D01G005400 chrUn 82.482 137 4 9 6162 6298 328674875 328674759 1.240000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G005400 chr7D 2605560 2612522 6962 True 12859.000000 12859 100.000000 1 6963 1 chr7D.!!$R1 6962
1 TraesCS7D01G005400 chr7D 3629822 3633199 3377 True 3598.000000 3598 86.085000 2587 5966 1 chr7D.!!$R4 3379
2 TraesCS7D01G005400 chr7D 3783623 3788339 4716 True 2622.000000 3714 87.905000 1238 5966 2 chr7D.!!$R8 4728
3 TraesCS7D01G005400 chr7D 2354355 2359830 5475 True 1993.500000 3432 85.695500 555 5966 2 chr7D.!!$R6 5411
4 TraesCS7D01G005400 chr7D 3236365 3237037 672 True 900.000000 900 90.749000 6284 6963 1 chr7D.!!$R3 679
5 TraesCS7D01G005400 chr7D 3221156 3221828 672 True 894.000000 894 90.616000 6284 6963 1 chr7D.!!$R2 679
6 TraesCS7D01G005400 chr7D 3793738 3794427 689 True 538.000000 538 81.572000 380 1088 1 chr7D.!!$R5 708
7 TraesCS7D01G005400 chr7D 2560018 2563033 3015 True 521.666667 880 86.573000 3660 6807 3 chr7D.!!$R7 3147
8 TraesCS7D01G005400 chr4A 740577922 740582433 4511 False 2430.500000 3712 86.708500 1540 5965 2 chr4A.!!$F7 4425
9 TraesCS7D01G005400 chr4A 741794632 741796017 1385 True 2182.000000 2182 94.904000 1159 2566 1 chr4A.!!$R2 1407
10 TraesCS7D01G005400 chr4A 742055922 742059369 3447 False 2071.500000 2316 89.218000 1238 4634 2 chr4A.!!$F10 3396
11 TraesCS7D01G005400 chr4A 741484371 741485613 1242 True 1879.000000 1879 93.819000 1238 2497 1 chr4A.!!$R1 1259
12 TraesCS7D01G005400 chr4A 739650643 739657755 7112 False 1535.000000 2327 88.270667 1238 6628 3 chr4A.!!$F5 5390
13 TraesCS7D01G005400 chr4A 739866234 739871828 5594 False 1500.250000 2429 87.707750 1241 6963 4 chr4A.!!$F6 5722
14 TraesCS7D01G005400 chr4A 741811530 741817729 6199 True 1374.666667 2309 90.746000 1764 6738 3 chr4A.!!$R5 4974
15 TraesCS7D01G005400 chr4A 741588162 741593746 5584 False 1289.800000 3487 90.826200 534 5966 5 chr4A.!!$F9 5432
16 TraesCS7D01G005400 chr4A 740452094 740457822 5728 True 1287.600000 2590 88.803000 162 5982 5 chr4A.!!$R4 5820
17 TraesCS7D01G005400 chr4A 740015726 740022713 6987 True 1198.920000 2163 87.969400 601 5963 5 chr4A.!!$R3 5362
18 TraesCS7D01G005400 chr4A 740939941 740941974 2033 False 882.000000 1230 86.109000 4866 6751 2 chr4A.!!$F8 1885
19 TraesCS7D01G005400 chr4A 742133087 742135873 2786 False 709.000000 1199 85.029500 4928 6913 2 chr4A.!!$F11 1985
20 TraesCS7D01G005400 chr4A 740926725 740927339 614 False 608.000000 608 85.072000 490 1090 1 chr4A.!!$F4 600
21 TraesCS7D01G005400 chr4A 740268916 740269430 514 False 597.000000 597 87.548000 603 1123 1 chr4A.!!$F1 520
22 TraesCS7D01G005400 chr4A 740303069 740303580 511 False 593.000000 593 87.548000 603 1123 1 chr4A.!!$F2 520
23 TraesCS7D01G005400 chr4A 740346321 740346835 514 False 586.000000 586 87.165000 603 1123 1 chr4A.!!$F3 520
24 TraesCS7D01G005400 chr7A 3204676 3208034 3358 True 1818.500000 2425 87.780000 2587 5982 2 chr7A.!!$R3 3395
25 TraesCS7D01G005400 chr7A 2114212 2117580 3368 True 1701.500000 2191 86.820000 2579 5966 2 chr7A.!!$R2 3387
26 TraesCS7D01G005400 chr7A 3311244 3315967 4723 False 1657.000000 2279 86.993333 1241 5928 3 chr7A.!!$F1 4687
27 TraesCS7D01G005400 chr7A 3631703 3634709 3006 True 1106.000000 1622 88.896000 588 2472 2 chr7A.!!$R4 1884
28 TraesCS7D01G005400 chr7A 2002072 2004271 2199 True 436.500000 704 82.682000 63 1109 2 chr7A.!!$R1 1046
29 TraesCS7D01G005400 chrUn 325094945 325095615 670 True 902.000000 902 90.869000 6286 6963 1 chrUn.!!$R1 677
30 TraesCS7D01G005400 chrUn 340806355 340807027 672 False 900.000000 900 90.749000 6284 6963 1 chrUn.!!$F1 679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
532 1735 0.034960 CTCTCCTCTCACTCCGTCCA 60.035 60.000 0.00 0.00 0.00 4.02 F
536 1739 0.679505 CCTCTCACTCCGTCCAAACA 59.320 55.000 0.00 0.00 0.00 2.83 F
1004 2228 1.106351 AACACCCGCAACAAGATGCA 61.106 50.000 3.27 0.00 46.76 3.96 F
1432 3969 1.293062 AGGTCCTCATGGATGCAAGT 58.707 50.000 0.00 0.00 45.29 3.16 F
2978 7392 0.109723 TAGCAAACCAGCCTTCCGTT 59.890 50.000 0.00 0.00 34.23 4.44 F
3841 8259 1.064783 GGGTCGTCGGTATTCGGAC 59.935 63.158 0.00 0.63 39.48 4.79 F
4918 9565 0.321919 GTGCAGATGGTGGAGAGCAA 60.322 55.000 0.00 0.00 33.37 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1766 4306 1.270907 CTGGTACCACTTGAGCCTCT 58.729 55.000 11.60 0.00 0.00 3.69 R
2446 5040 2.146342 TCAGCTCACTGTAAAGCTTGC 58.854 47.619 12.62 0.00 46.49 4.01 R
2688 7102 6.873076 CACTTGGGCAAAAGCTGATTAATAAA 59.127 34.615 0.00 0.00 0.00 1.40 R
3428 7843 0.961019 TTGCATCACCAAGTTGGAGC 59.039 50.000 28.80 22.93 40.96 4.70 R
3948 8367 0.109597 GTTTTCAGGCTGCCATGTCG 60.110 55.000 22.65 3.62 0.00 4.35 R
5471 10169 0.311790 AACGCACCAGAGCATTTGTG 59.688 50.000 0.00 0.00 0.00 3.33 R
6309 13026 0.035630 GAATGAGGCACAGGCAGACT 60.036 55.000 0.00 0.00 43.71 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.520721 TCATGGAGAGAAAGAAGGATGCA 59.479 43.478 0.00 0.00 0.00 3.96
25 26 4.581309 TGGAGAGAAAGAAGGATGCATT 57.419 40.909 0.00 0.00 0.00 3.56
26 27 4.267536 TGGAGAGAAAGAAGGATGCATTG 58.732 43.478 0.00 0.00 0.00 2.82
27 28 4.019051 TGGAGAGAAAGAAGGATGCATTGA 60.019 41.667 0.00 0.00 0.00 2.57
29 30 5.426504 GAGAGAAAGAAGGATGCATTGAGA 58.573 41.667 0.00 0.00 0.00 3.27
30 31 5.430007 AGAGAAAGAAGGATGCATTGAGAG 58.570 41.667 0.00 0.00 0.00 3.20
31 32 5.189342 AGAGAAAGAAGGATGCATTGAGAGA 59.811 40.000 0.00 0.00 0.00 3.10
32 33 5.430007 AGAAAGAAGGATGCATTGAGAGAG 58.570 41.667 0.00 0.00 0.00 3.20
33 34 3.842007 AGAAGGATGCATTGAGAGAGG 57.158 47.619 0.00 0.00 0.00 3.69
34 35 3.382278 AGAAGGATGCATTGAGAGAGGA 58.618 45.455 0.00 0.00 0.00 3.71
35 36 3.388676 AGAAGGATGCATTGAGAGAGGAG 59.611 47.826 0.00 0.00 0.00 3.69
36 37 2.048601 AGGATGCATTGAGAGAGGAGG 58.951 52.381 0.00 0.00 0.00 4.30
37 38 1.072015 GGATGCATTGAGAGAGGAGGG 59.928 57.143 0.00 0.00 0.00 4.30
38 39 1.767681 GATGCATTGAGAGAGGAGGGT 59.232 52.381 0.00 0.00 0.00 4.34
39 40 0.907486 TGCATTGAGAGAGGAGGGTG 59.093 55.000 0.00 0.00 0.00 4.61
40 41 0.179936 GCATTGAGAGAGGAGGGTGG 59.820 60.000 0.00 0.00 0.00 4.61
41 42 1.871418 CATTGAGAGAGGAGGGTGGA 58.129 55.000 0.00 0.00 0.00 4.02
42 43 1.761784 CATTGAGAGAGGAGGGTGGAG 59.238 57.143 0.00 0.00 0.00 3.86
43 44 1.084866 TTGAGAGAGGAGGGTGGAGA 58.915 55.000 0.00 0.00 0.00 3.71
44 45 0.628522 TGAGAGAGGAGGGTGGAGAG 59.371 60.000 0.00 0.00 0.00 3.20
45 46 0.629058 GAGAGAGGAGGGTGGAGAGT 59.371 60.000 0.00 0.00 0.00 3.24
46 47 0.629058 AGAGAGGAGGGTGGAGAGTC 59.371 60.000 0.00 0.00 0.00 3.36
47 48 0.396556 GAGAGGAGGGTGGAGAGTCC 60.397 65.000 0.00 0.00 36.96 3.85
48 49 1.382009 GAGGAGGGTGGAGAGTCCC 60.382 68.421 0.00 0.00 43.71 4.46
52 53 2.283676 GGGTGGAGAGTCCCGTGA 60.284 66.667 0.00 0.00 35.03 4.35
53 54 1.686110 GGGTGGAGAGTCCCGTGAT 60.686 63.158 0.00 0.00 35.03 3.06
54 55 1.517832 GGTGGAGAGTCCCGTGATG 59.482 63.158 0.00 0.00 35.03 3.07
55 56 1.517832 GTGGAGAGTCCCGTGATGG 59.482 63.158 0.00 0.00 35.03 3.51
56 57 2.359169 TGGAGAGTCCCGTGATGGC 61.359 63.158 0.00 0.00 35.03 4.40
57 58 2.105128 GAGAGTCCCGTGATGGCG 59.895 66.667 0.00 0.00 35.87 5.69
64 65 2.125147 CCGTGATGGCGGTCACAT 60.125 61.111 18.79 0.00 46.89 3.21
65 66 1.142965 CCGTGATGGCGGTCACATA 59.857 57.895 18.79 0.00 46.89 2.29
70 71 2.682856 GTGATGGCGGTCACATAATGTT 59.317 45.455 15.35 0.00 46.04 2.71
108 109 4.329545 AGGTGCGACCGTGCCATT 62.330 61.111 0.00 0.00 44.90 3.16
111 112 1.729131 GTGCGACCGTGCCATTTTG 60.729 57.895 0.00 0.00 0.00 2.44
116 117 1.662876 CGACCGTGCCATTTTGTCTTG 60.663 52.381 0.00 0.00 0.00 3.02
118 119 1.066908 ACCGTGCCATTTTGTCTTGTG 59.933 47.619 0.00 0.00 0.00 3.33
128 129 3.574284 TTTGTCTTGTGTGCATATGCC 57.426 42.857 24.54 15.85 41.18 4.40
131 132 0.395586 TCTTGTGTGCATATGCCCCC 60.396 55.000 24.54 12.86 41.18 5.40
133 134 0.251967 TTGTGTGCATATGCCCCCAA 60.252 50.000 24.54 19.03 41.18 4.12
134 135 0.969917 TGTGTGCATATGCCCCCAAC 60.970 55.000 24.54 15.59 41.18 3.77
135 136 0.684153 GTGTGCATATGCCCCCAACT 60.684 55.000 24.54 0.00 41.18 3.16
147 148 2.360350 CCAACTCCCATGCACGCT 60.360 61.111 0.00 0.00 0.00 5.07
154 155 3.803082 CCATGCACGCTTGGGACG 61.803 66.667 14.54 0.00 37.53 4.79
165 166 4.988716 TGGGACGGCCGACAGAGT 62.989 66.667 35.90 8.10 33.83 3.24
166 167 3.692406 GGGACGGCCGACAGAGTT 61.692 66.667 35.90 7.12 33.83 3.01
174 1294 1.803943 CCGACAGAGTTCTCCTCGG 59.196 63.158 16.66 16.66 45.44 4.63
178 1298 2.438411 GACAGAGTTCTCCTCGGAAGA 58.562 52.381 0.00 0.00 45.44 2.87
190 1310 6.349300 TCTCCTCGGAAGAAATAATCAAAGG 58.651 40.000 0.00 0.00 41.32 3.11
191 1311 5.437060 TCCTCGGAAGAAATAATCAAAGGG 58.563 41.667 0.00 0.00 41.32 3.95
192 1312 5.045140 TCCTCGGAAGAAATAATCAAAGGGT 60.045 40.000 0.00 0.00 41.32 4.34
196 1316 7.343357 TCGGAAGAAATAATCAAAGGGTGTAT 58.657 34.615 0.00 0.00 37.03 2.29
198 1318 7.067008 CGGAAGAAATAATCAAAGGGTGTATGT 59.933 37.037 0.00 0.00 0.00 2.29
201 1321 8.055279 AGAAATAATCAAAGGGTGTATGTGTG 57.945 34.615 0.00 0.00 0.00 3.82
202 1322 7.888021 AGAAATAATCAAAGGGTGTATGTGTGA 59.112 33.333 0.00 0.00 0.00 3.58
213 1333 7.231467 AGGGTGTATGTGTGATTTAAGTTTCT 58.769 34.615 0.00 0.00 0.00 2.52
214 1334 7.724061 AGGGTGTATGTGTGATTTAAGTTTCTT 59.276 33.333 0.00 0.00 0.00 2.52
263 1412 3.054802 TCCTCCTCTTTCAAATCCAGAGC 60.055 47.826 0.00 0.00 33.89 4.09
283 1432 6.424509 CAGAGCAGATAAGAATCCAATGAGAC 59.575 42.308 0.00 0.00 31.98 3.36
293 1442 5.191323 AGAATCCAATGAGACTGTCCAATCT 59.809 40.000 3.76 0.00 0.00 2.40
319 1468 3.315191 TCCAGTGTTTGAAACTAAGCAGC 59.685 43.478 9.69 0.00 0.00 5.25
322 1471 4.025229 CAGTGTTTGAAACTAAGCAGCGTA 60.025 41.667 9.69 0.00 0.00 4.42
323 1472 4.025145 AGTGTTTGAAACTAAGCAGCGTAC 60.025 41.667 9.69 0.00 0.00 3.67
327 1476 2.287728 TGAAACTAAGCAGCGTACGTGA 60.288 45.455 17.90 0.00 0.00 4.35
329 1478 0.456312 ACTAAGCAGCGTACGTGAGC 60.456 55.000 17.90 17.36 0.00 4.26
331 1480 2.860690 TAAGCAGCGTACGTGAGCGG 62.861 60.000 17.90 11.48 43.45 5.52
334 1483 4.415332 AGCGTACGTGAGCGGGTG 62.415 66.667 17.90 0.00 43.45 4.61
335 1484 4.409218 GCGTACGTGAGCGGGTGA 62.409 66.667 17.90 0.00 43.45 4.02
337 1486 2.181021 GTACGTGAGCGGGTGAGG 59.819 66.667 0.00 0.00 43.45 3.86
338 1487 3.755628 TACGTGAGCGGGTGAGGC 61.756 66.667 0.00 0.00 43.45 4.70
349 1498 2.187946 GTGAGGCACCATCGGGAG 59.812 66.667 0.00 0.00 38.05 4.30
355 1504 3.723172 CACCATCGGGAGCAATCG 58.277 61.111 0.00 0.00 38.05 3.34
356 1505 1.143838 CACCATCGGGAGCAATCGA 59.856 57.895 0.00 0.00 39.79 3.59
364 1540 2.009774 CGGGAGCAATCGACAAAAGAT 58.990 47.619 0.00 0.00 0.00 2.40
374 1550 2.603110 TCGACAAAAGATGCATAGCGTC 59.397 45.455 0.00 3.09 44.07 5.19
376 1552 2.017049 ACAAAAGATGCATAGCGTCCC 58.983 47.619 0.00 0.00 44.75 4.46
486 1685 1.832883 AGTGAGAGAGAGACGCATGT 58.167 50.000 0.00 0.00 0.00 3.21
487 1686 1.472082 AGTGAGAGAGAGACGCATGTG 59.528 52.381 4.30 4.30 0.00 3.21
488 1687 1.470494 GTGAGAGAGAGACGCATGTGA 59.530 52.381 14.43 0.00 0.00 3.58
489 1688 2.098934 GTGAGAGAGAGACGCATGTGAT 59.901 50.000 14.43 0.30 0.00 3.06
490 1689 2.098770 TGAGAGAGAGACGCATGTGATG 59.901 50.000 14.43 0.00 0.00 3.07
491 1690 2.098614 AGAGAGAGACGCATGTGATGT 58.901 47.619 14.43 0.00 0.00 3.06
492 1691 2.098934 AGAGAGAGACGCATGTGATGTC 59.901 50.000 14.43 9.03 0.00 3.06
493 1692 1.135915 AGAGAGACGCATGTGATGTCC 59.864 52.381 14.43 0.00 33.09 4.02
494 1693 0.176680 AGAGACGCATGTGATGTCCC 59.823 55.000 14.43 0.00 33.09 4.46
523 1726 0.325110 CTGCTTCCCCTCTCCTCTCA 60.325 60.000 0.00 0.00 0.00 3.27
525 1728 0.325203 GCTTCCCCTCTCCTCTCACT 60.325 60.000 0.00 0.00 0.00 3.41
528 1731 1.454847 CCCCTCTCCTCTCACTCCG 60.455 68.421 0.00 0.00 0.00 4.63
529 1732 1.304952 CCCTCTCCTCTCACTCCGT 59.695 63.158 0.00 0.00 0.00 4.69
531 1734 0.750182 CCTCTCCTCTCACTCCGTCC 60.750 65.000 0.00 0.00 0.00 4.79
532 1735 0.034960 CTCTCCTCTCACTCCGTCCA 60.035 60.000 0.00 0.00 0.00 4.02
536 1739 0.679505 CCTCTCACTCCGTCCAAACA 59.320 55.000 0.00 0.00 0.00 2.83
712 1935 4.524318 GCCTTGCGCGCCCTACTA 62.524 66.667 30.77 5.30 0.00 1.82
793 2016 2.310233 GCTCAAGTCGTTGCTCGCA 61.310 57.895 0.00 0.00 39.67 5.10
966 2190 1.304713 TAAGAGGGTCGGCTCCGTT 60.305 57.895 8.28 0.00 40.74 4.44
975 2199 4.785453 GGCTCCGTTCCCTGCAGG 62.785 72.222 26.87 26.87 0.00 4.85
1004 2228 1.106351 AACACCCGCAACAAGATGCA 61.106 50.000 3.27 0.00 46.76 3.96
1005 2229 1.106351 ACACCCGCAACAAGATGCAA 61.106 50.000 0.00 0.00 46.76 4.08
1106 2542 6.105740 TCCTTCCTAATTCCTATCCCTCTACA 59.894 42.308 0.00 0.00 0.00 2.74
1119 2555 8.678199 CCTATCCCTCTACAACAAAAAGAAATC 58.322 37.037 0.00 0.00 0.00 2.17
1160 3051 3.821748 AGAGAGCCGTTTCCTTTTCTTT 58.178 40.909 0.00 0.00 0.00 2.52
1189 3295 2.363788 TAACTCGATCTTGTTGCGCT 57.636 45.000 9.73 0.00 0.00 5.92
1190 3296 2.363788 AACTCGATCTTGTTGCGCTA 57.636 45.000 9.73 0.00 0.00 4.26
1191 3297 2.586258 ACTCGATCTTGTTGCGCTAT 57.414 45.000 9.73 0.00 0.00 2.97
1192 3298 3.710326 ACTCGATCTTGTTGCGCTATA 57.290 42.857 9.73 0.00 0.00 1.31
1193 3299 3.633235 ACTCGATCTTGTTGCGCTATAG 58.367 45.455 9.73 3.18 0.00 1.31
1195 3301 1.457303 CGATCTTGTTGCGCTATAGGC 59.543 52.381 9.73 4.19 37.64 3.93
1197 3303 1.939974 TCTTGTTGCGCTATAGGCAG 58.060 50.000 9.73 0.00 42.12 4.85
1199 3305 2.429250 TCTTGTTGCGCTATAGGCAGTA 59.571 45.455 9.73 6.66 42.12 2.74
1200 3306 3.069586 TCTTGTTGCGCTATAGGCAGTAT 59.930 43.478 9.73 0.00 42.12 2.12
1201 3307 3.469008 TGTTGCGCTATAGGCAGTATT 57.531 42.857 9.73 0.00 42.12 1.89
1202 3308 4.594123 TGTTGCGCTATAGGCAGTATTA 57.406 40.909 9.73 0.25 42.12 0.98
1203 3309 4.304110 TGTTGCGCTATAGGCAGTATTAC 58.696 43.478 9.73 10.20 42.12 1.89
1204 3310 4.038763 TGTTGCGCTATAGGCAGTATTACT 59.961 41.667 9.73 0.00 42.12 2.24
1205 3311 4.866508 TGCGCTATAGGCAGTATTACTT 57.133 40.909 9.73 0.00 41.91 2.24
1206 3312 5.970317 TGCGCTATAGGCAGTATTACTTA 57.030 39.130 9.73 0.00 41.91 2.24
1207 3313 6.525578 TGCGCTATAGGCAGTATTACTTAT 57.474 37.500 9.73 0.00 41.91 1.73
1209 3315 8.234136 TGCGCTATAGGCAGTATTACTTATAT 57.766 34.615 9.73 0.00 41.91 0.86
1211 3317 8.569641 GCGCTATAGGCAGTATTACTTATATCT 58.430 37.037 0.00 0.00 41.91 1.98
1432 3969 1.293062 AGGTCCTCATGGATGCAAGT 58.707 50.000 0.00 0.00 45.29 3.16
1476 4013 3.557898 GGTGTCAGCTCCTCAAAGATGAA 60.558 47.826 0.00 0.00 42.81 2.57
1513 4050 5.880332 GCCACATACCTTGAAGATCTGTTAA 59.120 40.000 0.00 0.00 0.00 2.01
1641 4181 5.183904 GTCTCTTGGCTACAAATTTGACCAT 59.816 40.000 24.64 4.75 35.89 3.55
1754 4294 4.759516 AAACCATCCGTGTTGATGTAAC 57.240 40.909 0.00 0.00 40.43 2.50
1766 4306 3.500448 TGATGTAACTTGTGCTCCCAA 57.500 42.857 0.00 0.00 0.00 4.12
1977 4517 5.011125 CCTAGTAATTGATGGTCGGATGAGT 59.989 44.000 0.00 0.00 0.00 3.41
2236 4778 6.531594 CGCTTCTGATGAACTTCACATTACTA 59.468 38.462 0.00 0.00 0.00 1.82
2348 4932 4.352009 TGCTTATTTTCCACATGGTCCAT 58.648 39.130 0.00 0.00 36.34 3.41
2357 4941 6.446909 TTCCACATGGTCCATAATAGCATA 57.553 37.500 3.38 0.00 33.49 3.14
2363 4950 9.486497 CACATGGTCCATAATAGCATATAGATC 57.514 37.037 3.38 0.00 33.49 2.75
2378 4965 6.820656 GCATATAGATCAAATCCCTACAGGTG 59.179 42.308 0.00 0.00 36.75 4.00
2379 4966 7.527868 GCATATAGATCAAATCCCTACAGGTGT 60.528 40.741 0.00 0.00 36.75 4.16
2446 5040 8.355169 TCAATTTCTGAAAAGATGTTTCTCAGG 58.645 33.333 18.48 9.10 34.69 3.86
2506 5603 4.689071 CGTTATAGTACATGCCTGTCCAA 58.311 43.478 0.00 0.00 36.79 3.53
2688 7102 2.718062 TGGGATACATCAGCATGGGATT 59.282 45.455 0.00 0.00 34.98 3.01
2978 7392 0.109723 TAGCAAACCAGCCTTCCGTT 59.890 50.000 0.00 0.00 34.23 4.44
3014 7428 6.552859 TTCACACACATACATGATTCGTTT 57.447 33.333 0.00 0.00 0.00 3.60
3021 7435 8.483218 CACACATACATGATTCGTTTATCTCTC 58.517 37.037 0.00 0.00 0.00 3.20
3022 7436 8.417106 ACACATACATGATTCGTTTATCTCTCT 58.583 33.333 0.00 0.00 0.00 3.10
3055 7469 9.665264 ATCAAATTTAACTTCAGAAAGAACGAC 57.335 29.630 0.00 0.00 36.30 4.34
3098 7512 6.407752 GCTACAACAGCCTTCCTTATTACCTA 60.408 42.308 0.00 0.00 45.23 3.08
3231 7646 1.637553 ACATGGAGGAAGTTGCAGGAT 59.362 47.619 0.00 0.00 0.00 3.24
3428 7843 2.804527 TCATAAGGTCCGTCGACTATCG 59.195 50.000 14.70 0.00 42.10 2.92
3473 7888 5.587388 ATGCCAAGATACCAGAAAACATG 57.413 39.130 0.00 0.00 0.00 3.21
3510 7925 3.128068 ACGTTCACTTGGAGTTTTTGGAC 59.872 43.478 0.00 0.00 0.00 4.02
3626 8041 4.336993 GCTATAGACCTCACTGGGATATCG 59.663 50.000 3.21 0.00 41.11 2.92
3810 8225 5.128499 CACCTCAGTCTTCCTCTTGATACAT 59.872 44.000 0.00 0.00 0.00 2.29
3815 8230 8.774546 TCAGTCTTCCTCTTGATACATATCTT 57.225 34.615 0.82 0.00 33.88 2.40
3826 8241 7.293299 TCTTGATACATATCTTCTGGATTGGGT 59.707 37.037 0.82 0.00 35.98 4.51
3841 8259 1.064783 GGGTCGTCGGTATTCGGAC 59.935 63.158 0.00 0.63 39.48 4.79
3879 8297 6.441088 ACCACCTGGAGGATCTTTATATTC 57.559 41.667 17.56 0.00 38.94 1.75
3911 8329 3.616956 TCTTCTGACCATGACCATGTC 57.383 47.619 8.93 7.23 37.11 3.06
4000 8419 1.480954 GGCTCACAGATCCTCGGTTAA 59.519 52.381 0.00 0.00 0.00 2.01
4053 8472 1.353076 GTTTAACGTAGCACCTCCCG 58.647 55.000 0.00 0.00 0.00 5.14
4055 8474 2.546645 TTAACGTAGCACCTCCCGCG 62.547 60.000 0.00 0.00 0.00 6.46
4102 8527 2.355444 CACACAGCCGCATCATATTTGA 59.645 45.455 0.00 0.00 36.00 2.69
4156 8587 3.754850 CACCTGTGCATTCTGAAGATTGA 59.245 43.478 6.43 0.00 0.00 2.57
4161 8592 5.065235 TGTGCATTCTGAAGATTGAAGTGA 58.935 37.500 6.43 0.00 0.00 3.41
4162 8593 5.180680 TGTGCATTCTGAAGATTGAAGTGAG 59.819 40.000 6.43 0.00 0.00 3.51
4163 8594 4.698780 TGCATTCTGAAGATTGAAGTGAGG 59.301 41.667 6.43 0.00 0.00 3.86
4170 8601 3.064900 AGATTGAAGTGAGGGAACTGC 57.935 47.619 0.00 0.00 44.43 4.40
4171 8602 2.641815 AGATTGAAGTGAGGGAACTGCT 59.358 45.455 0.00 0.00 44.43 4.24
4237 8668 4.162888 TGCTCTGTCATTGTATGTGGAGAT 59.837 41.667 0.00 0.00 0.00 2.75
4273 8704 2.029623 GATCATCTTTGGCATGGCTGT 58.970 47.619 21.08 1.12 0.00 4.40
4306 8749 4.039730 AGCTCTCAAGTACTTCAAGCTGAA 59.960 41.667 24.56 5.00 37.24 3.02
4372 8815 2.840038 TGCCTAATCTCTGGAAGCTCAA 59.160 45.455 0.00 0.00 0.00 3.02
4476 8925 4.779696 TGGTACTGCATTAATCAGCATCA 58.220 39.130 12.18 6.12 40.42 3.07
4478 8927 5.829391 TGGTACTGCATTAATCAGCATCAAT 59.171 36.000 12.18 0.00 40.42 2.57
4634 9140 4.573607 GGTTCCGATGGTGATAAAAGGTAC 59.426 45.833 0.00 0.00 0.00 3.34
4636 9142 5.272283 TCCGATGGTGATAAAAGGTACTC 57.728 43.478 0.00 0.00 38.49 2.59
4638 9144 6.131264 TCCGATGGTGATAAAAGGTACTCTA 58.869 40.000 0.00 0.00 38.49 2.43
4639 9145 6.264744 TCCGATGGTGATAAAAGGTACTCTAG 59.735 42.308 0.00 0.00 38.49 2.43
4640 9146 6.040616 CCGATGGTGATAAAAGGTACTCTAGT 59.959 42.308 0.00 0.00 38.49 2.57
4724 9281 6.711194 CCTGATTTGATATTCATGCTCTGACT 59.289 38.462 0.00 0.00 32.17 3.41
4746 9304 7.549134 TGACTAAGCTATCTAATGGTTGTTGTG 59.451 37.037 0.00 0.00 0.00 3.33
4760 9318 6.057533 TGGTTGTTGTGATCAGGATATCATC 58.942 40.000 4.83 0.00 38.13 2.92
4761 9319 6.057533 GGTTGTTGTGATCAGGATATCATCA 58.942 40.000 4.83 2.71 38.13 3.07
4774 9350 6.012113 AGGATATCATCAGAGTCCTCTTCAG 58.988 44.000 4.83 0.00 37.98 3.02
4777 9356 2.109774 CATCAGAGTCCTCTTCAGGCT 58.890 52.381 0.00 0.00 40.12 4.58
4829 9416 4.769859 AGGAGTTCTAACAGAGACGTTC 57.230 45.455 0.00 0.00 32.31 3.95
4852 9449 7.172868 TCCGTCATCAGGTGTTAAATTACTA 57.827 36.000 0.00 0.00 0.00 1.82
4853 9450 7.037438 TCCGTCATCAGGTGTTAAATTACTAC 58.963 38.462 0.00 0.00 0.00 2.73
4859 9456 9.871238 CATCAGGTGTTAAATTACTACTAGTGT 57.129 33.333 5.39 4.48 0.00 3.55
4861 9458 9.081204 TCAGGTGTTAAATTACTACTAGTGTCA 57.919 33.333 5.39 0.00 0.00 3.58
4863 9460 8.529476 AGGTGTTAAATTACTACTAGTGTCAGG 58.471 37.037 5.39 0.00 0.00 3.86
4864 9461 8.309656 GGTGTTAAATTACTACTAGTGTCAGGT 58.690 37.037 5.39 0.00 0.00 4.00
4871 9475 4.632153 ACTACTAGTGTCAGGTGCAAAAG 58.368 43.478 5.39 0.00 0.00 2.27
4889 9521 5.984926 GCAAAAGGATTGATGAAGTGTTGAA 59.015 36.000 0.00 0.00 0.00 2.69
4918 9565 0.321919 GTGCAGATGGTGGAGAGCAA 60.322 55.000 0.00 0.00 33.37 3.91
4960 9607 3.004734 GCAATACCATTGGTGTGATAGGC 59.995 47.826 18.83 7.96 36.19 3.93
4987 9634 5.455899 GGAACTCTTCATCTATTGCCTCCAT 60.456 44.000 0.00 0.00 0.00 3.41
4991 9638 4.832823 TCTTCATCTATTGCCTCCATCGTA 59.167 41.667 0.00 0.00 0.00 3.43
5062 9709 3.047877 GTGGTTCGCAACGGGGAG 61.048 66.667 0.00 0.00 37.28 4.30
5204 9863 2.409870 CCACCGGCTCAAAGCATCC 61.410 63.158 0.00 0.00 44.75 3.51
5230 9898 0.969894 AGTCGCTTGCTGTAGGAACT 59.030 50.000 0.00 0.00 46.37 3.01
5234 9902 1.337260 CGCTTGCTGTAGGAACTGAGT 60.337 52.381 0.00 0.00 41.52 3.41
5242 9910 2.438021 TGTAGGAACTGAGTTGCTGGTT 59.562 45.455 26.50 5.65 43.60 3.67
5318 10013 1.502163 GCTGGCTGATGCGATGTACC 61.502 60.000 0.00 0.00 40.82 3.34
5388 10083 0.322187 GCGGGAGGCAAGGTTTCTTA 60.322 55.000 0.00 0.00 42.87 2.10
5389 10084 1.450025 CGGGAGGCAAGGTTTCTTAC 58.550 55.000 0.00 0.00 0.00 2.34
5454 10152 0.996762 ACTTGGACACCCCTTCCCAA 60.997 55.000 0.00 0.00 37.18 4.12
5471 10169 2.508526 CCAACATGAATAGGGCTAGGC 58.491 52.381 8.00 8.00 0.00 3.93
5699 10400 7.286508 CGCTGATTACAGTGTGAATAATGATC 58.713 38.462 5.88 0.00 45.95 2.92
5788 12151 0.920763 AAGATGGCTGGGACATGGGA 60.921 55.000 0.00 0.00 38.20 4.37
5825 12188 1.005450 ACCGGCTGATTGTAATTGGGT 59.995 47.619 0.00 0.00 0.00 4.51
5848 12217 6.314896 GGTCTCCAAACAATTCTAGTGATGAG 59.685 42.308 0.00 0.00 0.00 2.90
5853 12222 6.404074 CCAAACAATTCTAGTGATGAGAAGGC 60.404 42.308 0.00 0.00 36.41 4.35
5894 12263 2.436646 CGGATGAGCAACCGCCTT 60.437 61.111 6.25 0.00 42.55 4.35
5945 12320 1.956043 GGCGACCAGATTTTGTGCA 59.044 52.632 0.00 0.00 0.00 4.57
5950 12325 0.951558 ACCAGATTTTGTGCACCGTC 59.048 50.000 15.69 7.05 0.00 4.79
5979 12354 2.550978 CTGAGTCCACGCGGAATAAAT 58.449 47.619 12.47 0.00 45.20 1.40
5980 12355 3.713288 CTGAGTCCACGCGGAATAAATA 58.287 45.455 12.47 0.00 45.20 1.40
5981 12356 3.450578 TGAGTCCACGCGGAATAAATAC 58.549 45.455 12.47 0.00 45.20 1.89
5982 12357 2.466846 AGTCCACGCGGAATAAATACG 58.533 47.619 12.47 0.00 45.20 3.06
5983 12358 1.523934 GTCCACGCGGAATAAATACGG 59.476 52.381 12.47 0.00 45.20 4.02
5985 12360 0.863144 CACGCGGAATAAATACGGGG 59.137 55.000 12.47 0.00 43.57 5.73
5987 12362 1.142474 CGCGGAATAAATACGGGGAC 58.858 55.000 0.00 0.00 36.99 4.46
5988 12363 1.538634 CGCGGAATAAATACGGGGACA 60.539 52.381 0.00 0.00 36.99 4.02
5989 12364 2.774687 GCGGAATAAATACGGGGACAT 58.225 47.619 0.00 0.00 0.00 3.06
5992 12527 4.322198 GCGGAATAAATACGGGGACATCTA 60.322 45.833 0.00 0.00 0.00 1.98
6012 12547 6.122850 TCTATTGATGATTCAACTTTGGCG 57.877 37.500 0.00 0.00 44.36 5.69
6018 12553 1.000274 GATTCAACTTTGGCGGCAACT 60.000 47.619 25.48 9.67 0.00 3.16
6019 12554 0.383949 TTCAACTTTGGCGGCAACTC 59.616 50.000 25.48 0.00 0.00 3.01
6020 12555 1.370414 CAACTTTGGCGGCAACTCG 60.370 57.895 25.48 17.28 0.00 4.18
6021 12556 1.822186 AACTTTGGCGGCAACTCGT 60.822 52.632 25.48 17.93 0.00 4.18
6043 12586 6.715264 TCGTGCTCTCTATAATCAATCAGGTA 59.285 38.462 0.00 0.00 0.00 3.08
6065 12623 2.789339 CGCACCTCATACAATGTAGTCG 59.211 50.000 0.00 0.00 0.00 4.18
6066 12624 3.733988 CGCACCTCATACAATGTAGTCGT 60.734 47.826 0.00 0.00 0.00 4.34
6067 12625 3.797256 GCACCTCATACAATGTAGTCGTC 59.203 47.826 0.00 0.00 0.00 4.20
6068 12626 4.035684 CACCTCATACAATGTAGTCGTCG 58.964 47.826 0.00 0.00 0.00 5.12
6069 12627 3.693085 ACCTCATACAATGTAGTCGTCGT 59.307 43.478 0.00 0.00 0.00 4.34
6070 12628 4.201891 ACCTCATACAATGTAGTCGTCGTC 60.202 45.833 0.00 0.00 0.00 4.20
6071 12629 3.931824 TCATACAATGTAGTCGTCGTCG 58.068 45.455 0.00 0.00 38.55 5.12
6072 12630 2.163826 TACAATGTAGTCGTCGTCGC 57.836 50.000 0.00 0.00 36.96 5.19
6073 12631 0.520404 ACAATGTAGTCGTCGTCGCT 59.480 50.000 0.00 0.97 36.96 4.93
6074 12632 1.068748 ACAATGTAGTCGTCGTCGCTT 60.069 47.619 0.00 0.00 36.96 4.68
6075 12633 1.983605 CAATGTAGTCGTCGTCGCTTT 59.016 47.619 0.00 0.00 36.96 3.51
6076 12634 2.342910 ATGTAGTCGTCGTCGCTTTT 57.657 45.000 0.00 0.00 36.96 2.27
6077 12635 1.401530 TGTAGTCGTCGTCGCTTTTG 58.598 50.000 0.00 0.00 36.96 2.44
6078 12636 1.268692 TGTAGTCGTCGTCGCTTTTGT 60.269 47.619 0.00 0.00 36.96 2.83
6079 12637 1.783140 GTAGTCGTCGTCGCTTTTGTT 59.217 47.619 0.00 0.00 36.96 2.83
6080 12638 0.850856 AGTCGTCGTCGCTTTTGTTC 59.149 50.000 0.00 0.00 36.96 3.18
6081 12639 0.573521 GTCGTCGTCGCTTTTGTTCA 59.426 50.000 0.00 0.00 36.96 3.18
6082 12640 0.850217 TCGTCGTCGCTTTTGTTCAG 59.150 50.000 0.00 0.00 36.96 3.02
6083 12641 0.575390 CGTCGTCGCTTTTGTTCAGT 59.425 50.000 0.00 0.00 0.00 3.41
6084 12642 1.005347 CGTCGTCGCTTTTGTTCAGTT 60.005 47.619 0.00 0.00 0.00 3.16
6085 12643 2.216940 CGTCGTCGCTTTTGTTCAGTTA 59.783 45.455 0.00 0.00 0.00 2.24
6086 12644 3.121126 CGTCGTCGCTTTTGTTCAGTTAT 60.121 43.478 0.00 0.00 0.00 1.89
6087 12645 4.088923 CGTCGTCGCTTTTGTTCAGTTATA 59.911 41.667 0.00 0.00 0.00 0.98
6088 12646 5.303485 GTCGTCGCTTTTGTTCAGTTATAC 58.697 41.667 0.00 0.00 0.00 1.47
6089 12647 5.118203 GTCGTCGCTTTTGTTCAGTTATACT 59.882 40.000 0.00 0.00 0.00 2.12
6090 12648 5.344128 TCGTCGCTTTTGTTCAGTTATACTC 59.656 40.000 0.00 0.00 0.00 2.59
6091 12649 5.444218 CGTCGCTTTTGTTCAGTTATACTCC 60.444 44.000 0.00 0.00 0.00 3.85
6092 12650 4.933400 TCGCTTTTGTTCAGTTATACTCCC 59.067 41.667 0.00 0.00 0.00 4.30
6093 12651 4.094442 CGCTTTTGTTCAGTTATACTCCCC 59.906 45.833 0.00 0.00 0.00 4.81
6094 12652 5.007682 GCTTTTGTTCAGTTATACTCCCCA 58.992 41.667 0.00 0.00 0.00 4.96
6095 12653 5.652452 GCTTTTGTTCAGTTATACTCCCCAT 59.348 40.000 0.00 0.00 0.00 4.00
6096 12654 6.404734 GCTTTTGTTCAGTTATACTCCCCATG 60.405 42.308 0.00 0.00 0.00 3.66
6097 12655 4.150897 TGTTCAGTTATACTCCCCATGC 57.849 45.455 0.00 0.00 0.00 4.06
6098 12656 3.118038 TGTTCAGTTATACTCCCCATGCC 60.118 47.826 0.00 0.00 0.00 4.40
6099 12657 2.054799 TCAGTTATACTCCCCATGCCC 58.945 52.381 0.00 0.00 0.00 5.36
6100 12658 1.073923 CAGTTATACTCCCCATGCCCC 59.926 57.143 0.00 0.00 0.00 5.80
6101 12659 0.404426 GTTATACTCCCCATGCCCCC 59.596 60.000 0.00 0.00 0.00 5.40
6102 12660 1.131303 TTATACTCCCCATGCCCCCG 61.131 60.000 0.00 0.00 0.00 5.73
6108 12666 4.883354 CCCATGCCCCCGCTTCTC 62.883 72.222 0.00 0.00 35.36 2.87
6109 12667 3.801997 CCATGCCCCCGCTTCTCT 61.802 66.667 0.00 0.00 35.36 3.10
6110 12668 2.203126 CATGCCCCCGCTTCTCTC 60.203 66.667 0.00 0.00 35.36 3.20
6111 12669 2.688666 ATGCCCCCGCTTCTCTCA 60.689 61.111 0.00 0.00 35.36 3.27
6112 12670 2.074948 ATGCCCCCGCTTCTCTCAT 61.075 57.895 0.00 0.00 35.36 2.90
6113 12671 1.639635 ATGCCCCCGCTTCTCTCATT 61.640 55.000 0.00 0.00 35.36 2.57
6114 12672 1.821332 GCCCCCGCTTCTCTCATTG 60.821 63.158 0.00 0.00 0.00 2.82
6115 12673 1.821332 CCCCCGCTTCTCTCATTGC 60.821 63.158 0.00 0.00 0.00 3.56
6116 12674 1.078214 CCCCGCTTCTCTCATTGCA 60.078 57.895 0.00 0.00 0.00 4.08
6117 12675 1.372087 CCCCGCTTCTCTCATTGCAC 61.372 60.000 0.00 0.00 0.00 4.57
6118 12676 1.372087 CCCGCTTCTCTCATTGCACC 61.372 60.000 0.00 0.00 0.00 5.01
6119 12677 0.392193 CCGCTTCTCTCATTGCACCT 60.392 55.000 0.00 0.00 0.00 4.00
6120 12678 1.005340 CGCTTCTCTCATTGCACCTC 58.995 55.000 0.00 0.00 0.00 3.85
6121 12679 1.673923 CGCTTCTCTCATTGCACCTCA 60.674 52.381 0.00 0.00 0.00 3.86
6122 12680 2.641305 GCTTCTCTCATTGCACCTCAT 58.359 47.619 0.00 0.00 0.00 2.90
6123 12681 3.739209 CGCTTCTCTCATTGCACCTCATA 60.739 47.826 0.00 0.00 0.00 2.15
6124 12682 3.559242 GCTTCTCTCATTGCACCTCATAC 59.441 47.826 0.00 0.00 0.00 2.39
6125 12683 4.763073 CTTCTCTCATTGCACCTCATACA 58.237 43.478 0.00 0.00 0.00 2.29
6126 12684 4.824479 TCTCTCATTGCACCTCATACAA 57.176 40.909 0.00 0.00 0.00 2.41
6127 12685 5.363562 TCTCTCATTGCACCTCATACAAT 57.636 39.130 0.00 0.00 34.42 2.71
6129 12687 4.847198 TCTCATTGCACCTCATACAATGT 58.153 39.130 12.98 0.00 46.79 2.71
6130 12688 4.637091 TCTCATTGCACCTCATACAATGTG 59.363 41.667 12.98 11.19 46.79 3.21
6131 12689 4.334552 TCATTGCACCTCATACAATGTGT 58.665 39.130 12.98 0.00 46.79 3.72
6132 12690 4.766373 TCATTGCACCTCATACAATGTGTT 59.234 37.500 12.98 0.00 46.79 3.32
6133 12691 5.243507 TCATTGCACCTCATACAATGTGTTT 59.756 36.000 12.98 0.00 46.79 2.83
6134 12692 5.528043 TTGCACCTCATACAATGTGTTTT 57.472 34.783 0.00 0.00 0.00 2.43
6135 12693 5.119931 TGCACCTCATACAATGTGTTTTC 57.880 39.130 0.00 0.00 0.00 2.29
6136 12694 4.022416 TGCACCTCATACAATGTGTTTTCC 60.022 41.667 0.00 0.00 0.00 3.13
6137 12695 4.022416 GCACCTCATACAATGTGTTTTCCA 60.022 41.667 0.00 0.00 0.00 3.53
6138 12696 5.702865 CACCTCATACAATGTGTTTTCCAG 58.297 41.667 0.00 0.00 0.00 3.86
6139 12697 4.218417 ACCTCATACAATGTGTTTTCCAGC 59.782 41.667 0.00 0.00 0.00 4.85
6140 12698 4.406069 CTCATACAATGTGTTTTCCAGCG 58.594 43.478 0.00 0.00 0.00 5.18
6141 12699 3.818210 TCATACAATGTGTTTTCCAGCGT 59.182 39.130 0.00 0.00 0.00 5.07
6142 12700 2.490328 ACAATGTGTTTTCCAGCGTG 57.510 45.000 0.00 0.00 0.00 5.34
6143 12701 1.066908 ACAATGTGTTTTCCAGCGTGG 59.933 47.619 0.00 0.00 39.43 4.94
6144 12702 0.673437 AATGTGTTTTCCAGCGTGGG 59.327 50.000 4.52 0.00 38.32 4.61
6145 12703 0.179004 ATGTGTTTTCCAGCGTGGGA 60.179 50.000 4.52 0.00 38.32 4.37
6146 12704 0.394488 TGTGTTTTCCAGCGTGGGAA 60.394 50.000 5.92 5.92 45.00 3.97
6147 12705 0.958822 GTGTTTTCCAGCGTGGGAAT 59.041 50.000 10.14 0.00 45.90 3.01
6148 12706 2.156098 GTGTTTTCCAGCGTGGGAATA 58.844 47.619 10.14 4.04 45.90 1.75
6149 12707 2.095415 GTGTTTTCCAGCGTGGGAATAC 60.095 50.000 17.39 17.39 45.90 1.89
6150 12708 2.224670 TGTTTTCCAGCGTGGGAATACT 60.225 45.455 21.52 0.00 45.90 2.12
6151 12709 2.396590 TTTCCAGCGTGGGAATACTC 57.603 50.000 10.14 0.00 45.90 2.59
6152 12710 0.539986 TTCCAGCGTGGGAATACTCC 59.460 55.000 5.92 0.00 41.92 3.85
6211 12787 5.171337 GCTTTTGTTCAGTTGTGTTATCACG 59.829 40.000 0.00 0.00 46.49 4.35
6224 12940 5.636121 TGTGTTATCACGTTCTGAATGGTAC 59.364 40.000 13.73 5.18 46.49 3.34
6233 12949 7.919091 TCACGTTCTGAATGGTACTGATATTAC 59.081 37.037 13.73 0.00 0.00 1.89
6246 12963 9.826574 GGTACTGATATTACTTGTATGGTCAAA 57.173 33.333 0.00 0.00 0.00 2.69
6249 12966 9.261180 ACTGATATTACTTGTATGGTCAAATCG 57.739 33.333 0.00 0.00 0.00 3.34
6253 12970 3.343617 ACTTGTATGGTCAAATCGTGGG 58.656 45.455 0.00 0.00 0.00 4.61
6557 13323 6.656270 ACATCAAATTCAGTCTGTATCTTGCA 59.344 34.615 0.00 0.00 0.00 4.08
6587 13355 7.969387 TTCTGTTCAAAATTTCTCAAACTCG 57.031 32.000 0.00 0.00 0.00 4.18
6609 13378 8.294577 ACTCGGAATAAATAAAACTGTTTGGAC 58.705 33.333 6.53 0.00 0.00 4.02
6896 14448 2.157085 CGCAGACGTAGATATCGCTACA 59.843 50.000 0.00 0.00 40.56 2.74
6903 14455 5.589192 ACGTAGATATCGCTACAGCTTTTT 58.411 37.500 0.00 0.00 40.56 1.94
6947 14499 2.670414 GACAGCAACAAGGATCTTCTCG 59.330 50.000 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.882444 TGCATCCTTCTTTCTCTCCATG 58.118 45.455 0.00 0.00 0.00 3.66
3 4 4.792513 ATGCATCCTTCTTTCTCTCCAT 57.207 40.909 0.00 0.00 0.00 3.41
5 6 4.521146 TCAATGCATCCTTCTTTCTCTCC 58.479 43.478 0.00 0.00 0.00 3.71
8 9 5.426504 TCTCTCAATGCATCCTTCTTTCTC 58.573 41.667 0.00 0.00 0.00 2.87
10 11 4.575645 CCTCTCTCAATGCATCCTTCTTTC 59.424 45.833 0.00 0.00 0.00 2.62
11 12 4.226846 TCCTCTCTCAATGCATCCTTCTTT 59.773 41.667 0.00 0.00 0.00 2.52
13 14 3.382278 TCCTCTCTCAATGCATCCTTCT 58.618 45.455 0.00 0.00 0.00 2.85
14 15 3.494749 CCTCCTCTCTCAATGCATCCTTC 60.495 52.174 0.00 0.00 0.00 3.46
16 17 2.048601 CCTCCTCTCTCAATGCATCCT 58.951 52.381 0.00 0.00 0.00 3.24
17 18 1.072015 CCCTCCTCTCTCAATGCATCC 59.928 57.143 0.00 0.00 0.00 3.51
18 19 1.767681 ACCCTCCTCTCTCAATGCATC 59.232 52.381 0.00 0.00 0.00 3.91
19 20 1.489649 CACCCTCCTCTCTCAATGCAT 59.510 52.381 0.00 0.00 0.00 3.96
20 21 0.907486 CACCCTCCTCTCTCAATGCA 59.093 55.000 0.00 0.00 0.00 3.96
21 22 0.179936 CCACCCTCCTCTCTCAATGC 59.820 60.000 0.00 0.00 0.00 3.56
23 24 1.648568 TCTCCACCCTCCTCTCTCAAT 59.351 52.381 0.00 0.00 0.00 2.57
25 26 0.628522 CTCTCCACCCTCCTCTCTCA 59.371 60.000 0.00 0.00 0.00 3.27
26 27 0.629058 ACTCTCCACCCTCCTCTCTC 59.371 60.000 0.00 0.00 0.00 3.20
27 28 0.629058 GACTCTCCACCCTCCTCTCT 59.371 60.000 0.00 0.00 0.00 3.10
29 30 1.700985 GGACTCTCCACCCTCCTCT 59.299 63.158 0.00 0.00 36.28 3.69
30 31 1.382009 GGGACTCTCCACCCTCCTC 60.382 68.421 0.00 0.00 42.56 3.71
31 32 2.781406 GGGACTCTCCACCCTCCT 59.219 66.667 0.00 0.00 42.56 3.69
32 33 2.760385 CGGGACTCTCCACCCTCC 60.760 72.222 0.00 0.00 43.57 4.30
33 34 2.037527 ACGGGACTCTCCACCCTC 59.962 66.667 0.00 0.00 43.57 4.30
34 35 2.169590 ATCACGGGACTCTCCACCCT 62.170 60.000 0.00 0.00 43.57 4.34
35 36 1.686110 ATCACGGGACTCTCCACCC 60.686 63.158 0.00 0.00 38.64 4.61
36 37 1.517832 CATCACGGGACTCTCCACC 59.482 63.158 0.00 0.00 38.64 4.61
37 38 1.517832 CCATCACGGGACTCTCCAC 59.482 63.158 0.00 0.00 38.64 4.02
38 39 2.359169 GCCATCACGGGACTCTCCA 61.359 63.158 0.00 0.00 38.64 3.86
39 40 2.501610 GCCATCACGGGACTCTCC 59.498 66.667 0.00 0.00 35.23 3.71
40 41 2.105128 CGCCATCACGGGACTCTC 59.895 66.667 0.00 0.00 34.06 3.20
50 51 2.682352 CAACATTATGTGACCGCCATCA 59.318 45.455 0.00 0.00 0.00 3.07
51 52 2.682856 ACAACATTATGTGACCGCCATC 59.317 45.455 0.00 0.00 30.82 3.51
52 53 2.722094 ACAACATTATGTGACCGCCAT 58.278 42.857 0.00 0.00 30.82 4.40
53 54 2.192664 ACAACATTATGTGACCGCCA 57.807 45.000 0.00 0.00 30.82 5.69
61 62 4.104086 TCCTCTCCCTCACAACATTATGT 58.896 43.478 0.00 0.00 0.00 2.29
62 63 4.760530 TCCTCTCCCTCACAACATTATG 57.239 45.455 0.00 0.00 0.00 1.90
63 64 5.905331 TGTATCCTCTCCCTCACAACATTAT 59.095 40.000 0.00 0.00 0.00 1.28
64 65 5.128827 GTGTATCCTCTCCCTCACAACATTA 59.871 44.000 0.00 0.00 0.00 1.90
65 66 4.080863 GTGTATCCTCTCCCTCACAACATT 60.081 45.833 0.00 0.00 0.00 2.71
70 71 1.763968 CGTGTATCCTCTCCCTCACA 58.236 55.000 0.00 0.00 0.00 3.58
78 79 1.517832 GCACCTGCGTGTATCCTCT 59.482 57.895 0.00 0.00 42.39 3.69
108 109 2.230992 GGGCATATGCACACAAGACAAA 59.769 45.455 28.07 0.00 45.57 2.83
118 119 1.109323 GGAGTTGGGGGCATATGCAC 61.109 60.000 28.07 25.33 45.53 4.57
128 129 2.751436 CGTGCATGGGAGTTGGGG 60.751 66.667 0.00 0.00 0.00 4.96
131 132 1.210931 CAAGCGTGCATGGGAGTTG 59.789 57.895 8.27 0.00 0.00 3.16
133 134 2.360350 CCAAGCGTGCATGGGAGT 60.360 61.111 8.27 0.00 31.77 3.85
147 148 3.691342 CTCTGTCGGCCGTCCCAA 61.691 66.667 27.15 1.01 0.00 4.12
152 153 2.637383 GGAGAACTCTGTCGGCCGT 61.637 63.158 27.15 2.66 0.00 5.68
154 155 1.513622 GAGGAGAACTCTGTCGGCC 59.486 63.158 0.00 0.00 43.14 6.13
157 158 1.131504 CTTCCGAGGAGAACTCTGTCG 59.868 57.143 15.01 15.01 44.33 4.35
162 163 6.574350 TGATTATTTCTTCCGAGGAGAACTC 58.426 40.000 0.00 0.00 43.02 3.01
165 166 6.823689 CCTTTGATTATTTCTTCCGAGGAGAA 59.176 38.462 0.00 0.00 0.00 2.87
166 167 6.349300 CCTTTGATTATTTCTTCCGAGGAGA 58.651 40.000 0.00 0.00 0.00 3.71
174 1294 8.739972 ACACATACACCCTTTGATTATTTCTTC 58.260 33.333 0.00 0.00 0.00 2.87
178 1298 8.593945 ATCACACATACACCCTTTGATTATTT 57.406 30.769 0.00 0.00 0.00 1.40
222 1342 8.946797 AGGAGGAGTAGTAGTACTTTGTTAAA 57.053 34.615 8.40 0.00 39.78 1.52
225 1345 6.792424 AGAGGAGGAGTAGTAGTACTTTGTT 58.208 40.000 8.40 0.00 39.78 2.83
227 1347 7.393796 TGAAAGAGGAGGAGTAGTAGTACTTTG 59.606 40.741 8.40 0.00 39.78 2.77
229 1349 7.030234 TGAAAGAGGAGGAGTAGTAGTACTT 57.970 40.000 8.40 0.00 39.78 2.24
230 1350 6.639590 TGAAAGAGGAGGAGTAGTAGTACT 57.360 41.667 10.09 10.09 42.59 2.73
231 1351 7.700022 TTTGAAAGAGGAGGAGTAGTAGTAC 57.300 40.000 0.00 0.00 0.00 2.73
232 1352 7.560626 GGATTTGAAAGAGGAGGAGTAGTAGTA 59.439 40.741 0.00 0.00 0.00 1.82
233 1353 6.381707 GGATTTGAAAGAGGAGGAGTAGTAGT 59.618 42.308 0.00 0.00 0.00 2.73
234 1354 6.381420 TGGATTTGAAAGAGGAGGAGTAGTAG 59.619 42.308 0.00 0.00 0.00 2.57
235 1355 6.261435 TGGATTTGAAAGAGGAGGAGTAGTA 58.739 40.000 0.00 0.00 0.00 1.82
236 1356 5.094387 TGGATTTGAAAGAGGAGGAGTAGT 58.906 41.667 0.00 0.00 0.00 2.73
237 1357 5.423610 TCTGGATTTGAAAGAGGAGGAGTAG 59.576 44.000 0.00 0.00 0.00 2.57
242 1391 3.277715 GCTCTGGATTTGAAAGAGGAGG 58.722 50.000 0.00 0.00 38.30 4.30
245 1394 3.947868 TCTGCTCTGGATTTGAAAGAGG 58.052 45.455 0.00 0.00 38.30 3.69
263 1412 6.705381 GGACAGTCTCATTGGATTCTTATCTG 59.295 42.308 0.00 0.00 0.00 2.90
283 1432 3.947868 ACACTGGAATCAGATTGGACAG 58.052 45.455 0.00 8.64 43.49 3.51
293 1442 5.592282 TGCTTAGTTTCAAACACTGGAATCA 59.408 36.000 2.41 0.00 0.00 2.57
319 1468 2.202440 CTCACCCGCTCACGTACG 60.202 66.667 15.01 15.01 37.70 3.67
338 1487 1.143838 TCGATTGCTCCCGATGGTG 59.856 57.895 0.00 0.00 0.00 4.17
339 1488 1.144057 GTCGATTGCTCCCGATGGT 59.856 57.895 0.00 0.00 37.14 3.55
340 1489 0.461870 TTGTCGATTGCTCCCGATGG 60.462 55.000 0.00 0.00 37.14 3.51
341 1490 1.368641 TTTGTCGATTGCTCCCGATG 58.631 50.000 0.00 0.00 37.14 3.84
344 1493 1.438651 TCTTTTGTCGATTGCTCCCG 58.561 50.000 0.00 0.00 0.00 5.14
345 1494 2.478539 GCATCTTTTGTCGATTGCTCCC 60.479 50.000 0.00 0.00 0.00 4.30
346 1495 2.162208 TGCATCTTTTGTCGATTGCTCC 59.838 45.455 0.00 0.00 0.00 4.70
347 1496 3.476295 TGCATCTTTTGTCGATTGCTC 57.524 42.857 0.00 0.00 0.00 4.26
349 1498 3.727723 GCTATGCATCTTTTGTCGATTGC 59.272 43.478 0.19 0.00 0.00 3.56
350 1499 3.964347 CGCTATGCATCTTTTGTCGATTG 59.036 43.478 0.19 0.00 0.00 2.67
352 1501 3.198068 ACGCTATGCATCTTTTGTCGAT 58.802 40.909 0.19 0.00 0.00 3.59
353 1502 2.603110 GACGCTATGCATCTTTTGTCGA 59.397 45.455 0.19 0.00 0.00 4.20
354 1503 2.285834 GGACGCTATGCATCTTTTGTCG 60.286 50.000 0.19 0.13 0.00 4.35
355 1504 2.032178 GGGACGCTATGCATCTTTTGTC 59.968 50.000 0.19 5.73 0.00 3.18
356 1505 2.017049 GGGACGCTATGCATCTTTTGT 58.983 47.619 0.19 0.00 0.00 2.83
364 1540 0.546122 AATTCCTGGGACGCTATGCA 59.454 50.000 0.00 0.00 0.00 3.96
374 1550 3.019564 CTGCCTCTTGTTAATTCCTGGG 58.980 50.000 0.00 0.00 0.00 4.45
376 1552 2.424956 GCCTGCCTCTTGTTAATTCCTG 59.575 50.000 0.00 0.00 0.00 3.86
486 1685 0.032117 AGATGGAGACGGGGACATCA 60.032 55.000 12.66 0.00 41.55 3.07
487 1686 0.390860 CAGATGGAGACGGGGACATC 59.609 60.000 0.00 0.00 39.89 3.06
488 1687 1.690219 GCAGATGGAGACGGGGACAT 61.690 60.000 0.00 0.00 0.00 3.06
489 1688 2.359169 GCAGATGGAGACGGGGACA 61.359 63.158 0.00 0.00 0.00 4.02
490 1689 1.617947 AAGCAGATGGAGACGGGGAC 61.618 60.000 0.00 0.00 0.00 4.46
491 1690 1.306141 AAGCAGATGGAGACGGGGA 60.306 57.895 0.00 0.00 0.00 4.81
492 1691 1.144936 GAAGCAGATGGAGACGGGG 59.855 63.158 0.00 0.00 0.00 5.73
493 1692 1.144936 GGAAGCAGATGGAGACGGG 59.855 63.158 0.00 0.00 0.00 5.28
494 1693 1.144936 GGGAAGCAGATGGAGACGG 59.855 63.158 0.00 0.00 0.00 4.79
525 1728 1.203994 GCTAGCTAGTGTTTGGACGGA 59.796 52.381 21.62 0.00 0.00 4.69
528 1731 4.082136 AGTGTAGCTAGCTAGTGTTTGGAC 60.082 45.833 24.78 12.64 0.00 4.02
529 1732 4.087182 AGTGTAGCTAGCTAGTGTTTGGA 58.913 43.478 24.78 0.00 0.00 3.53
531 1734 5.317733 AGAGTGTAGCTAGCTAGTGTTTG 57.682 43.478 24.78 0.00 0.00 2.93
532 1735 5.712917 AGAAGAGTGTAGCTAGCTAGTGTTT 59.287 40.000 24.78 14.72 0.00 2.83
536 1739 4.573201 CGAAGAAGAGTGTAGCTAGCTAGT 59.427 45.833 24.78 12.39 0.00 2.57
606 1826 2.438075 GCTGCAGCTCCTCCTTGG 60.438 66.667 31.33 0.00 38.21 3.61
635 1855 0.179134 GAAGCTGACGCCGTGTAGAT 60.179 55.000 0.00 0.00 36.60 1.98
733 1956 4.738345 GACACGTCGCGCTCGTCT 62.738 66.667 21.69 13.45 39.55 4.18
973 2197 1.456287 GGGTGTTCCTGCACTTCCT 59.544 57.895 0.00 0.00 39.21 3.36
974 2198 1.966451 CGGGTGTTCCTGCACTTCC 60.966 63.158 0.00 0.00 39.21 3.46
975 2199 3.655481 CGGGTGTTCCTGCACTTC 58.345 61.111 0.00 0.00 39.21 3.01
985 2209 1.106351 TGCATCTTGTTGCGGGTGTT 61.106 50.000 0.00 0.00 45.77 3.32
987 2211 0.387622 CTTGCATCTTGTTGCGGGTG 60.388 55.000 0.00 0.00 45.77 4.61
988 2212 0.537143 TCTTGCATCTTGTTGCGGGT 60.537 50.000 0.00 0.00 45.77 5.28
1106 2542 9.358872 GTTCAGTCTCTTTGATTTCTTTTTGTT 57.641 29.630 0.00 0.00 0.00 2.83
1119 2555 6.219473 TCTCTAAGCAAGTTCAGTCTCTTTG 58.781 40.000 0.00 0.00 0.00 2.77
1160 3051 6.149129 ACAAGATCGAGTTATGTCAGCATA 57.851 37.500 0.00 0.00 36.58 3.14
1202 3308 9.991906 TGCGCCTACTTTATTTTAGATATAAGT 57.008 29.630 4.18 0.00 0.00 2.24
1204 3310 8.932791 GCTGCGCCTACTTTATTTTAGATATAA 58.067 33.333 4.18 0.00 0.00 0.98
1205 3311 8.311836 AGCTGCGCCTACTTTATTTTAGATATA 58.688 33.333 4.18 0.00 0.00 0.86
1206 3312 7.162082 AGCTGCGCCTACTTTATTTTAGATAT 58.838 34.615 4.18 0.00 0.00 1.63
1207 3313 6.522054 AGCTGCGCCTACTTTATTTTAGATA 58.478 36.000 4.18 0.00 0.00 1.98
1209 3315 4.766375 AGCTGCGCCTACTTTATTTTAGA 58.234 39.130 4.18 0.00 0.00 2.10
1211 3317 4.509616 TGAGCTGCGCCTACTTTATTTTA 58.490 39.130 4.18 0.00 0.00 1.52
1212 3318 3.343617 TGAGCTGCGCCTACTTTATTTT 58.656 40.909 4.18 0.00 0.00 1.82
1214 3320 2.691409 TGAGCTGCGCCTACTTTATT 57.309 45.000 4.18 0.00 0.00 1.40
1215 3321 2.918712 ATGAGCTGCGCCTACTTTAT 57.081 45.000 4.18 0.00 0.00 1.40
1216 3322 2.691409 AATGAGCTGCGCCTACTTTA 57.309 45.000 4.18 0.00 0.00 1.85
1219 3325 0.539051 AGAAATGAGCTGCGCCTACT 59.461 50.000 4.18 0.00 0.00 2.57
1220 3326 1.328986 GAAGAAATGAGCTGCGCCTAC 59.671 52.381 4.18 0.00 0.00 3.18
1221 3327 1.208052 AGAAGAAATGAGCTGCGCCTA 59.792 47.619 4.18 0.00 0.00 3.93
1222 3328 0.035630 AGAAGAAATGAGCTGCGCCT 60.036 50.000 4.18 0.00 0.00 5.52
1224 3330 0.801251 ACAGAAGAAATGAGCTGCGC 59.199 50.000 0.00 0.00 31.74 6.09
1225 3331 3.681897 ACTAACAGAAGAAATGAGCTGCG 59.318 43.478 0.00 0.00 31.74 5.18
1226 3332 5.619625 AACTAACAGAAGAAATGAGCTGC 57.380 39.130 0.00 0.00 31.74 5.25
1227 3333 6.963796 ACAAACTAACAGAAGAAATGAGCTG 58.036 36.000 0.00 0.00 34.65 4.24
1476 4013 6.067217 AGGTATGTGGCTATTTCTTCAAGT 57.933 37.500 0.00 0.00 0.00 3.16
1766 4306 1.270907 CTGGTACCACTTGAGCCTCT 58.729 55.000 11.60 0.00 0.00 3.69
1977 4517 4.843728 CCAGCTGGGAGTTGATAAACTTA 58.156 43.478 26.14 0.00 40.01 2.24
2311 4860 8.499162 GGAAAATAAGCAGTACATACTATGCAG 58.501 37.037 5.46 0.00 34.13 4.41
2357 4941 6.158695 ACAACACCTGTAGGGATTTGATCTAT 59.841 38.462 12.57 0.00 40.27 1.98
2363 4950 5.163457 ACAAAACAACACCTGTAGGGATTTG 60.163 40.000 2.53 5.14 37.23 2.32
2446 5040 2.146342 TCAGCTCACTGTAAAGCTTGC 58.854 47.619 12.62 0.00 46.49 4.01
2506 5603 7.876068 TGAAGAGTAAAACTAATGTCCGTTGAT 59.124 33.333 0.00 0.00 0.00 2.57
2688 7102 6.873076 CACTTGGGCAAAAGCTGATTAATAAA 59.127 34.615 0.00 0.00 0.00 1.40
2718 7132 9.515226 TGTAGTTGTTATAATTCTGCTTCCTTT 57.485 29.630 0.00 0.00 0.00 3.11
2978 7392 9.018582 TGTATGTGTGTGAATAATTCCATTGAA 57.981 29.630 0.00 0.00 34.33 2.69
2987 7401 8.437360 ACGAATCATGTATGTGTGTGAATAAT 57.563 30.769 0.00 0.00 0.00 1.28
3037 7451 6.103997 ACTTGTGTCGTTCTTTCTGAAGTTA 58.896 36.000 0.00 0.00 35.01 2.24
3055 7469 3.393089 AGCTGAGGTTCAGTACTTGTG 57.607 47.619 7.80 0.00 45.94 3.33
3090 7504 5.454755 GGAGCAGGCATGTCTTTAGGTAATA 60.455 44.000 0.00 0.00 0.00 0.98
3098 7512 1.284198 AGATGGAGCAGGCATGTCTTT 59.716 47.619 0.00 0.00 0.00 2.52
3174 7588 1.203100 AGCAAGAAACCCTTCAGCCAT 60.203 47.619 0.00 0.00 36.21 4.40
3231 7646 9.430623 TCTATCAACAAGTTCATCGAAATACAA 57.569 29.630 0.00 0.00 0.00 2.41
3399 7814 3.367087 CGACGGACCTTATGAGAAAGTGT 60.367 47.826 0.00 0.00 0.00 3.55
3428 7843 0.961019 TTGCATCACCAAGTTGGAGC 59.039 50.000 28.80 22.93 40.96 4.70
3466 7881 6.315393 ACGTACTTGTGACTTTCTCATGTTTT 59.685 34.615 0.00 0.00 32.81 2.43
3473 7888 5.041940 AGTGAACGTACTTGTGACTTTCTC 58.958 41.667 0.00 0.00 0.00 2.87
3510 7925 4.063998 TGCAAGGCATACACTCTGATAG 57.936 45.455 0.00 0.00 31.71 2.08
3810 8225 2.361119 CGACGACCCAATCCAGAAGATA 59.639 50.000 0.00 0.00 33.66 1.98
3815 8230 0.323633 TACCGACGACCCAATCCAGA 60.324 55.000 0.00 0.00 0.00 3.86
3826 8241 0.680921 AAGGGTCCGAATACCGACGA 60.681 55.000 0.00 0.00 40.73 4.20
3841 8259 1.607178 TGGTTCAGCATGCCAAGGG 60.607 57.895 15.66 0.00 34.76 3.95
3879 8297 2.498078 GGTCAGAAGAAGGAGGTGTAGG 59.502 54.545 0.00 0.00 0.00 3.18
3911 8329 1.209990 AGAGCTCCCATGCTTCTCTTG 59.790 52.381 10.93 0.00 44.17 3.02
3944 8363 4.457496 AGGCTGCCATGTCGTCCG 62.457 66.667 22.65 0.00 0.00 4.79
3948 8367 0.109597 GTTTTCAGGCTGCCATGTCG 60.110 55.000 22.65 3.62 0.00 4.35
4000 8419 4.606457 GCTTTTGAAGCGTCATCATACT 57.394 40.909 2.36 0.00 45.74 2.12
4043 8462 3.077556 AGATTCGCGGGAGGTGCT 61.078 61.111 6.13 0.00 0.00 4.40
4111 8536 1.915078 AAGTCGCCTCTTCCCCCATG 61.915 60.000 0.00 0.00 0.00 3.66
4112 8537 1.616628 AAGTCGCCTCTTCCCCCAT 60.617 57.895 0.00 0.00 0.00 4.00
4114 8539 2.269241 CAAGTCGCCTCTTCCCCC 59.731 66.667 0.00 0.00 0.00 5.40
4124 8555 3.357079 CACAGGTGGCCAAGTCGC 61.357 66.667 7.24 0.00 0.00 5.19
4126 8557 1.181098 AATGCACAGGTGGCCAAGTC 61.181 55.000 7.24 0.00 0.00 3.01
4134 8565 3.754850 TCAATCTTCAGAATGCACAGGTG 59.245 43.478 0.00 0.00 34.76 4.00
4156 8587 5.248477 TCATTTACTAGCAGTTCCCTCACTT 59.752 40.000 0.00 0.00 0.00 3.16
4161 8592 5.700402 ACATCATTTACTAGCAGTTCCCT 57.300 39.130 0.00 0.00 0.00 4.20
4162 8593 5.880332 TCAACATCATTTACTAGCAGTTCCC 59.120 40.000 0.00 0.00 0.00 3.97
4163 8594 6.985188 TCAACATCATTTACTAGCAGTTCC 57.015 37.500 0.00 0.00 0.00 3.62
4200 8631 3.336568 AGCAGTGAGGGCAGGCAT 61.337 61.111 0.00 0.00 0.00 4.40
4273 8704 5.265191 AGTACTTGAGAGCTGTGAATCCTA 58.735 41.667 0.00 0.00 0.00 2.94
4306 8749 2.744202 CAAGCTATTCCACTTGCGAACT 59.256 45.455 0.00 0.00 37.11 3.01
4311 8754 1.467920 AGCCAAGCTATTCCACTTGC 58.532 50.000 0.00 0.00 41.56 4.01
4313 8756 6.857437 AATTTTAGCCAAGCTATTCCACTT 57.143 33.333 0.00 0.00 41.01 3.16
4372 8815 3.694566 GGGGATGTAATTGAAAACGAGCT 59.305 43.478 0.00 0.00 0.00 4.09
4387 8830 1.211567 TTGGTCCATTCGGGGGATGT 61.212 55.000 0.00 0.00 36.67 3.06
4476 8925 6.328672 ACTTCTCTAAGGCCTGTCATATGATT 59.671 38.462 5.69 0.43 37.01 2.57
4478 8927 5.211973 ACTTCTCTAAGGCCTGTCATATGA 58.788 41.667 5.69 0.00 37.01 2.15
4650 9156 8.181904 ACAACAGAAACACCAATCATTTAGAT 57.818 30.769 0.00 0.00 39.09 1.98
4652 9158 9.180678 GTTACAACAGAAACACCAATCATTTAG 57.819 33.333 0.00 0.00 0.00 1.85
4653 9159 8.908903 AGTTACAACAGAAACACCAATCATTTA 58.091 29.630 0.00 0.00 0.00 1.40
4696 9249 7.012989 TCAGAGCATGAATATCAAATCAGGTTG 59.987 37.037 0.00 0.00 34.02 3.77
4724 9281 8.264347 TGATCACAACAACCATTAGATAGCTTA 58.736 33.333 0.00 0.00 0.00 3.09
4746 9304 6.189859 AGAGGACTCTGATGATATCCTGATC 58.810 44.000 0.13 0.00 37.64 2.92
4760 9318 1.675415 GCAAGCCTGAAGAGGACTCTG 60.675 57.143 2.05 0.00 42.93 3.35
4761 9319 0.612744 GCAAGCCTGAAGAGGACTCT 59.387 55.000 0.00 0.00 42.93 3.24
4777 9356 5.450818 AAAAGTATACCTGGAGGATGCAA 57.549 39.130 0.00 0.00 34.45 4.08
4829 9416 7.039882 AGTAGTAATTTAACACCTGATGACGG 58.960 38.462 0.00 0.00 0.00 4.79
4852 9449 2.438021 TCCTTTTGCACCTGACACTAGT 59.562 45.455 0.00 0.00 0.00 2.57
4853 9450 3.126001 TCCTTTTGCACCTGACACTAG 57.874 47.619 0.00 0.00 0.00 2.57
4857 9454 2.942804 TCAATCCTTTTGCACCTGACA 58.057 42.857 0.00 0.00 0.00 3.58
4858 9455 3.507233 TCATCAATCCTTTTGCACCTGAC 59.493 43.478 0.00 0.00 0.00 3.51
4859 9456 3.765381 TCATCAATCCTTTTGCACCTGA 58.235 40.909 0.00 0.00 0.00 3.86
4860 9457 4.021719 ACTTCATCAATCCTTTTGCACCTG 60.022 41.667 0.00 0.00 0.00 4.00
4861 9458 4.021719 CACTTCATCAATCCTTTTGCACCT 60.022 41.667 0.00 0.00 0.00 4.00
4863 9460 4.874970 ACACTTCATCAATCCTTTTGCAC 58.125 39.130 0.00 0.00 0.00 4.57
4864 9461 5.068855 TCAACACTTCATCAATCCTTTTGCA 59.931 36.000 0.00 0.00 0.00 4.08
4871 9475 7.652909 TGACAAAATTCAACACTTCATCAATCC 59.347 33.333 0.00 0.00 0.00 3.01
4889 9521 2.559668 CACCATCTGCACCTGACAAAAT 59.440 45.455 0.00 0.00 0.00 1.82
4918 9565 0.541998 TCCACGAGACCACATCCTGT 60.542 55.000 0.00 0.00 0.00 4.00
4960 9607 3.134458 GCAATAGATGAAGAGTTCCCGG 58.866 50.000 0.00 0.00 0.00 5.73
5062 9709 2.353607 CGACGCAGGCGGTAGATC 60.354 66.667 18.63 4.96 44.69 2.75
5204 9863 1.447489 CAGCAAGCGACTCCCAGAG 60.447 63.158 0.00 0.00 35.52 3.35
5230 9898 2.151502 TCCCAAAAACCAGCAACTCA 57.848 45.000 0.00 0.00 0.00 3.41
5234 9902 1.407258 CTCGTTCCCAAAAACCAGCAA 59.593 47.619 0.00 0.00 0.00 3.91
5242 9910 0.468400 CAACCCCCTCGTTCCCAAAA 60.468 55.000 0.00 0.00 0.00 2.44
5318 10013 2.032987 AAACAAGTACCGCGGGGG 59.967 61.111 31.76 15.68 43.62 5.40
5382 10077 6.865205 GGAGCTCAAGTAACTAACGTAAGAAA 59.135 38.462 17.19 0.00 43.62 2.52
5388 10083 3.213249 CGGAGCTCAAGTAACTAACGT 57.787 47.619 17.19 0.00 0.00 3.99
5454 10152 2.126882 TGTGCCTAGCCCTATTCATGT 58.873 47.619 0.00 0.00 0.00 3.21
5471 10169 0.311790 AACGCACCAGAGCATTTGTG 59.688 50.000 0.00 0.00 0.00 3.33
5699 10400 4.749099 GTCCAGCTTATCATACTGCTTCAG 59.251 45.833 0.00 0.00 37.52 3.02
5788 12151 0.392998 GGTCACCACATGCTCGGAAT 60.393 55.000 3.56 0.00 0.00 3.01
5825 12188 7.244886 TCTCATCACTAGAATTGTTTGGAGA 57.755 36.000 0.00 0.00 0.00 3.71
5848 12217 1.131315 GAATGAAGCTCAACCGCCTTC 59.869 52.381 0.00 0.00 0.00 3.46
5853 12222 2.096496 GTCCATGAATGAAGCTCAACCG 59.904 50.000 0.00 0.00 0.00 4.44
5945 12320 1.003355 CTCAGCAACCCATGACGGT 60.003 57.895 0.00 0.00 37.93 4.83
5950 12325 1.300971 CGTGGACTCAGCAACCCATG 61.301 60.000 0.00 0.00 0.00 3.66
5988 12363 6.238842 CCGCCAAAGTTGAATCATCAATAGAT 60.239 38.462 0.00 0.00 46.67 1.98
5989 12364 5.066375 CCGCCAAAGTTGAATCATCAATAGA 59.934 40.000 0.00 0.00 46.67 1.98
5992 12527 3.676873 GCCGCCAAAGTTGAATCATCAAT 60.677 43.478 0.00 0.00 46.67 2.57
6018 12553 5.536538 ACCTGATTGATTATAGAGAGCACGA 59.463 40.000 0.00 0.00 0.00 4.35
6019 12554 5.777802 ACCTGATTGATTATAGAGAGCACG 58.222 41.667 0.00 0.00 0.00 5.34
6020 12555 6.804295 CGTACCTGATTGATTATAGAGAGCAC 59.196 42.308 0.00 0.00 0.00 4.40
6021 12556 6.570571 GCGTACCTGATTGATTATAGAGAGCA 60.571 42.308 0.00 0.00 0.00 4.26
6043 12586 3.733988 CGACTACATTGTATGAGGTGCGT 60.734 47.826 0.00 0.00 0.00 5.24
6057 12600 1.983605 CAAAAGCGACGACGACTACAT 59.016 47.619 12.29 0.00 42.66 2.29
6065 12623 2.732001 AACTGAACAAAAGCGACGAC 57.268 45.000 0.00 0.00 0.00 4.34
6066 12624 5.224888 AGTATAACTGAACAAAAGCGACGA 58.775 37.500 0.00 0.00 0.00 4.20
6067 12625 5.444218 GGAGTATAACTGAACAAAAGCGACG 60.444 44.000 0.00 0.00 0.00 5.12
6068 12626 5.163884 GGGAGTATAACTGAACAAAAGCGAC 60.164 44.000 0.00 0.00 0.00 5.19
6069 12627 4.933400 GGGAGTATAACTGAACAAAAGCGA 59.067 41.667 0.00 0.00 0.00 4.93
6070 12628 4.094442 GGGGAGTATAACTGAACAAAAGCG 59.906 45.833 0.00 0.00 0.00 4.68
6071 12629 5.007682 TGGGGAGTATAACTGAACAAAAGC 58.992 41.667 0.00 0.00 0.00 3.51
6072 12630 6.404734 GCATGGGGAGTATAACTGAACAAAAG 60.405 42.308 0.00 0.00 0.00 2.27
6073 12631 5.417580 GCATGGGGAGTATAACTGAACAAAA 59.582 40.000 0.00 0.00 0.00 2.44
6074 12632 4.947388 GCATGGGGAGTATAACTGAACAAA 59.053 41.667 0.00 0.00 0.00 2.83
6075 12633 4.523083 GCATGGGGAGTATAACTGAACAA 58.477 43.478 0.00 0.00 0.00 2.83
6076 12634 3.118038 GGCATGGGGAGTATAACTGAACA 60.118 47.826 0.00 0.00 0.00 3.18
6077 12635 3.477530 GGCATGGGGAGTATAACTGAAC 58.522 50.000 0.00 0.00 0.00 3.18
6078 12636 2.441750 GGGCATGGGGAGTATAACTGAA 59.558 50.000 0.00 0.00 0.00 3.02
6079 12637 2.054799 GGGCATGGGGAGTATAACTGA 58.945 52.381 0.00 0.00 0.00 3.41
6080 12638 1.073923 GGGGCATGGGGAGTATAACTG 59.926 57.143 0.00 0.00 0.00 3.16
6081 12639 1.446016 GGGGCATGGGGAGTATAACT 58.554 55.000 0.00 0.00 0.00 2.24
6082 12640 0.404426 GGGGGCATGGGGAGTATAAC 59.596 60.000 0.00 0.00 0.00 1.89
6083 12641 1.131303 CGGGGGCATGGGGAGTATAA 61.131 60.000 0.00 0.00 0.00 0.98
6084 12642 1.537889 CGGGGGCATGGGGAGTATA 60.538 63.158 0.00 0.00 0.00 1.47
6085 12643 2.854032 CGGGGGCATGGGGAGTAT 60.854 66.667 0.00 0.00 0.00 2.12
6091 12649 4.883354 GAGAAGCGGGGGCATGGG 62.883 72.222 0.00 0.00 0.00 4.00
6092 12650 3.764160 GAGAGAAGCGGGGGCATGG 62.764 68.421 0.00 0.00 0.00 3.66
6093 12651 2.203126 GAGAGAAGCGGGGGCATG 60.203 66.667 0.00 0.00 0.00 4.06
6094 12652 1.639635 AATGAGAGAAGCGGGGGCAT 61.640 55.000 0.00 0.00 0.00 4.40
6095 12653 2.300967 AATGAGAGAAGCGGGGGCA 61.301 57.895 0.00 0.00 0.00 5.36
6096 12654 1.821332 CAATGAGAGAAGCGGGGGC 60.821 63.158 0.00 0.00 0.00 5.80
6097 12655 1.821332 GCAATGAGAGAAGCGGGGG 60.821 63.158 0.00 0.00 0.00 5.40
6098 12656 1.078214 TGCAATGAGAGAAGCGGGG 60.078 57.895 0.00 0.00 0.00 5.73
6099 12657 1.372087 GGTGCAATGAGAGAAGCGGG 61.372 60.000 0.00 0.00 0.00 6.13
6100 12658 0.392193 AGGTGCAATGAGAGAAGCGG 60.392 55.000 0.00 0.00 0.00 5.52
6101 12659 1.005340 GAGGTGCAATGAGAGAAGCG 58.995 55.000 0.00 0.00 0.00 4.68
6102 12660 2.105006 TGAGGTGCAATGAGAGAAGC 57.895 50.000 0.00 0.00 0.00 3.86
6103 12661 4.763073 TGTATGAGGTGCAATGAGAGAAG 58.237 43.478 0.00 0.00 0.00 2.85
6104 12662 4.824479 TGTATGAGGTGCAATGAGAGAA 57.176 40.909 0.00 0.00 0.00 2.87
6105 12663 4.824479 TTGTATGAGGTGCAATGAGAGA 57.176 40.909 0.00 0.00 0.00 3.10
6111 12669 5.726980 AAACACATTGTATGAGGTGCAAT 57.273 34.783 0.00 0.00 42.86 3.56
6112 12670 5.508825 GGAAAACACATTGTATGAGGTGCAA 60.509 40.000 0.00 0.00 36.84 4.08
6113 12671 4.022416 GGAAAACACATTGTATGAGGTGCA 60.022 41.667 0.00 0.00 34.69 4.57
6114 12672 4.022416 TGGAAAACACATTGTATGAGGTGC 60.022 41.667 0.00 0.00 34.69 5.01
6115 12673 5.702865 CTGGAAAACACATTGTATGAGGTG 58.297 41.667 0.00 0.00 37.29 4.00
6116 12674 4.218417 GCTGGAAAACACATTGTATGAGGT 59.782 41.667 0.00 0.00 0.00 3.85
6117 12675 4.672542 CGCTGGAAAACACATTGTATGAGG 60.673 45.833 0.00 0.00 0.00 3.86
6118 12676 4.083324 ACGCTGGAAAACACATTGTATGAG 60.083 41.667 0.00 0.00 0.00 2.90
6119 12677 3.818210 ACGCTGGAAAACACATTGTATGA 59.182 39.130 0.00 0.00 0.00 2.15
6120 12678 3.913763 CACGCTGGAAAACACATTGTATG 59.086 43.478 0.00 0.00 0.00 2.39
6121 12679 3.057596 CCACGCTGGAAAACACATTGTAT 60.058 43.478 0.00 0.00 40.96 2.29
6122 12680 2.292016 CCACGCTGGAAAACACATTGTA 59.708 45.455 0.00 0.00 40.96 2.41
6123 12681 1.066908 CCACGCTGGAAAACACATTGT 59.933 47.619 0.00 0.00 40.96 2.71
6124 12682 1.602668 CCCACGCTGGAAAACACATTG 60.603 52.381 5.71 0.00 40.96 2.82
6125 12683 0.673437 CCCACGCTGGAAAACACATT 59.327 50.000 5.71 0.00 40.96 2.71
6126 12684 0.179004 TCCCACGCTGGAAAACACAT 60.179 50.000 5.71 0.00 40.96 3.21
6127 12685 0.394488 TTCCCACGCTGGAAAACACA 60.394 50.000 3.89 0.00 41.40 3.72
6128 12686 0.958822 ATTCCCACGCTGGAAAACAC 59.041 50.000 9.98 0.00 46.99 3.32
6129 12687 2.156098 GTATTCCCACGCTGGAAAACA 58.844 47.619 9.98 0.00 46.99 2.83
6130 12688 2.418976 GAGTATTCCCACGCTGGAAAAC 59.581 50.000 9.98 2.03 46.99 2.43
6131 12689 2.617021 GGAGTATTCCCACGCTGGAAAA 60.617 50.000 9.98 3.24 46.99 2.29
6132 12690 1.065709 GGAGTATTCCCACGCTGGAAA 60.066 52.381 9.98 0.00 46.99 3.13
6134 12692 2.208527 GGAGTATTCCCACGCTGGA 58.791 57.895 5.71 0.00 40.96 3.86
6135 12693 4.857251 GGAGTATTCCCACGCTGG 57.143 61.111 0.00 0.00 37.53 4.85
6180 12742 6.208644 ACACAACTGAACAAAAGCATATCAC 58.791 36.000 0.00 0.00 0.00 3.06
6211 12787 9.601217 ACAAGTAATATCAGTACCATTCAGAAC 57.399 33.333 0.00 0.00 0.00 3.01
6224 12940 9.261180 ACGATTTGACCATACAAGTAATATCAG 57.739 33.333 0.00 0.00 0.00 2.90
6233 12949 3.343617 ACCCACGATTTGACCATACAAG 58.656 45.455 0.00 0.00 0.00 3.16
6246 12963 2.616842 GTCAGTCAAACAAACCCACGAT 59.383 45.455 0.00 0.00 0.00 3.73
6249 12966 2.159296 GGTGTCAGTCAAACAAACCCAC 60.159 50.000 0.00 0.00 0.00 4.61
6253 12970 2.160813 ACACGGTGTCAGTCAAACAAAC 59.839 45.455 8.21 0.00 0.00 2.93
6309 13026 0.035630 GAATGAGGCACAGGCAGACT 60.036 55.000 0.00 0.00 43.71 3.24
6473 13204 8.345565 CAGATAAATTTGGGTCATAGTAACAGC 58.654 37.037 0.00 0.00 0.00 4.40
6602 13371 2.880890 ACTCATGTGCTTCTGTCCAAAC 59.119 45.455 0.00 0.00 0.00 2.93
6631 13400 9.297037 TCGACCTTATTCATCTGAGTGAATATA 57.703 33.333 16.23 10.43 45.46 0.86
6632 13401 8.183104 TCGACCTTATTCATCTGAGTGAATAT 57.817 34.615 16.23 7.86 45.46 1.28
6651 14193 4.497674 CCGTTTCGAGAAGATATTCGACCT 60.498 45.833 0.00 0.00 44.58 3.85
6653 14195 4.349501 ACCGTTTCGAGAAGATATTCGAC 58.650 43.478 0.00 0.00 44.58 4.20
6751 14293 1.351017 TGATTTGTGGTCAGGACTCCC 59.649 52.381 0.00 0.00 0.00 4.30
6872 14420 2.484651 AGCGATATCTACGTCTGCGAAT 59.515 45.455 0.00 0.00 42.00 3.34
6896 14448 0.393132 GGAGAGCCCGCTAAAAAGCT 60.393 55.000 0.00 0.00 38.56 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.