Multiple sequence alignment - TraesCS7D01G002700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G002700 chr7D 100.000 3218 0 0 1 3218 1753866 1750649 0.000000e+00 5943.0
1 TraesCS7D01G002700 chr7D 84.248 1111 169 5 957 2065 605166029 605164923 0.000000e+00 1077.0
2 TraesCS7D01G002700 chr7D 78.031 701 131 18 2363 3056 521520779 521520095 1.380000e-113 420.0
3 TraesCS7D01G002700 chr7D 75.559 716 139 24 2356 3048 232828176 232828878 1.440000e-83 320.0
4 TraesCS7D01G002700 chr7D 72.609 690 159 20 1130 1812 578780138 578780804 1.960000e-47 200.0
5 TraesCS7D01G002700 chr7D 78.846 104 19 3 61 163 605168157 605168056 2.070000e-07 67.6
6 TraesCS7D01G002700 chrUn 83.769 1072 162 5 999 2067 47479217 47480279 0.000000e+00 1005.0
7 TraesCS7D01G002700 chr4D 80.231 1300 222 21 957 2243 2999456 3000733 0.000000e+00 944.0
8 TraesCS7D01G002700 chr4D 80.000 700 125 15 2364 3056 107717959 107717268 1.330000e-138 503.0
9 TraesCS7D01G002700 chr4D 80.043 466 80 10 2391 2852 326244684 326245140 1.850000e-87 333.0
10 TraesCS7D01G002700 chr6D 81.556 1144 187 13 957 2093 21078523 21079649 0.000000e+00 922.0
11 TraesCS7D01G002700 chr5D 82.526 1053 168 8 1007 2054 447388095 447387054 0.000000e+00 911.0
12 TraesCS7D01G002700 chr5D 78.074 1277 239 31 975 2234 447706179 447704927 0.000000e+00 769.0
13 TraesCS7D01G002700 chr5B 79.545 1276 227 23 957 2220 545279608 545280861 0.000000e+00 880.0
14 TraesCS7D01G002700 chr5B 81.023 1075 186 10 1002 2067 545818778 545819843 0.000000e+00 839.0
15 TraesCS7D01G002700 chr5B 86.482 614 78 4 1717 2330 546151569 546150961 0.000000e+00 669.0
16 TraesCS7D01G002700 chr4A 80.649 925 157 13 957 1875 603031846 603032754 0.000000e+00 697.0
17 TraesCS7D01G002700 chr1D 79.506 688 124 15 2376 3056 476405988 476405311 1.040000e-129 473.0
18 TraesCS7D01G002700 chr4B 78.723 705 126 22 2362 3056 178379282 178379972 1.760000e-122 449.0
19 TraesCS7D01G002700 chr3A 78.398 699 112 31 2363 3048 451688376 451689048 4.970000e-113 418.0
20 TraesCS7D01G002700 chr3A 83.380 355 56 3 2353 2705 340277177 340276824 3.100000e-85 326.0
21 TraesCS7D01G002700 chr7A 77.730 696 121 27 2365 3048 600636642 600635969 2.330000e-106 396.0
22 TraesCS7D01G002700 chr3D 83.944 355 54 3 2353 2705 239600587 239600234 1.430000e-88 337.0
23 TraesCS7D01G002700 chr3B 77.273 572 107 22 2485 3048 204767346 204767902 6.700000e-82 315.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G002700 chr7D 1750649 1753866 3217 True 5943.0 5943 100.000 1 3218 1 chr7D.!!$R1 3217
1 TraesCS7D01G002700 chr7D 605164923 605168157 3234 True 572.3 1077 81.547 61 2065 2 chr7D.!!$R3 2004
2 TraesCS7D01G002700 chr7D 521520095 521520779 684 True 420.0 420 78.031 2363 3056 1 chr7D.!!$R2 693
3 TraesCS7D01G002700 chr7D 232828176 232828878 702 False 320.0 320 75.559 2356 3048 1 chr7D.!!$F1 692
4 TraesCS7D01G002700 chrUn 47479217 47480279 1062 False 1005.0 1005 83.769 999 2067 1 chrUn.!!$F1 1068
5 TraesCS7D01G002700 chr4D 2999456 3000733 1277 False 944.0 944 80.231 957 2243 1 chr4D.!!$F1 1286
6 TraesCS7D01G002700 chr4D 107717268 107717959 691 True 503.0 503 80.000 2364 3056 1 chr4D.!!$R1 692
7 TraesCS7D01G002700 chr6D 21078523 21079649 1126 False 922.0 922 81.556 957 2093 1 chr6D.!!$F1 1136
8 TraesCS7D01G002700 chr5D 447387054 447388095 1041 True 911.0 911 82.526 1007 2054 1 chr5D.!!$R1 1047
9 TraesCS7D01G002700 chr5D 447704927 447706179 1252 True 769.0 769 78.074 975 2234 1 chr5D.!!$R2 1259
10 TraesCS7D01G002700 chr5B 545279608 545280861 1253 False 880.0 880 79.545 957 2220 1 chr5B.!!$F1 1263
11 TraesCS7D01G002700 chr5B 545818778 545819843 1065 False 839.0 839 81.023 1002 2067 1 chr5B.!!$F2 1065
12 TraesCS7D01G002700 chr5B 546150961 546151569 608 True 669.0 669 86.482 1717 2330 1 chr5B.!!$R1 613
13 TraesCS7D01G002700 chr4A 603031846 603032754 908 False 697.0 697 80.649 957 1875 1 chr4A.!!$F1 918
14 TraesCS7D01G002700 chr1D 476405311 476405988 677 True 473.0 473 79.506 2376 3056 1 chr1D.!!$R1 680
15 TraesCS7D01G002700 chr4B 178379282 178379972 690 False 449.0 449 78.723 2362 3056 1 chr4B.!!$F1 694
16 TraesCS7D01G002700 chr3A 451688376 451689048 672 False 418.0 418 78.398 2363 3048 1 chr3A.!!$F1 685
17 TraesCS7D01G002700 chr7A 600635969 600636642 673 True 396.0 396 77.730 2365 3048 1 chr7A.!!$R1 683
18 TraesCS7D01G002700 chr3B 204767346 204767902 556 False 315.0 315 77.273 2485 3048 1 chr3B.!!$F1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
690 769 0.036010 CAGTCCATTTCCTCAGCCGT 60.036 55.0 0.0 0.0 0.0 5.68 F
1449 2696 0.390472 GCCTTGAGTCAGAAGTCCCG 60.390 60.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 3252 0.179111 TTGGTCGCTCTTCCGCTATG 60.179 55.0 0.0 0.0 0.00 2.23 R
3095 4380 0.037734 GAGGGGGACGAAACCACATT 59.962 55.0 0.0 0.0 34.56 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.983090 CTCAACGGCGATGCAATC 57.017 55.556 16.62 0.00 40.89 2.67
26 27 3.827634 GATGCAATCGGTGGGGTC 58.172 61.111 0.00 0.00 31.13 4.46
27 28 1.823899 GATGCAATCGGTGGGGTCC 60.824 63.158 0.00 0.00 31.13 4.46
28 29 2.270874 GATGCAATCGGTGGGGTCCT 62.271 60.000 0.00 0.00 31.13 3.85
29 30 2.438434 GCAATCGGTGGGGTCCTG 60.438 66.667 0.00 0.00 0.00 3.86
30 31 2.438434 CAATCGGTGGGGTCCTGC 60.438 66.667 0.00 0.00 0.00 4.85
31 32 3.728373 AATCGGTGGGGTCCTGCC 61.728 66.667 0.00 0.00 0.00 4.85
34 35 4.047125 CGGTGGGGTCCTGCCAAT 62.047 66.667 0.00 0.00 39.65 3.16
35 36 2.362889 GGTGGGGTCCTGCCAATG 60.363 66.667 0.00 0.00 39.65 2.82
36 37 3.070576 GTGGGGTCCTGCCAATGC 61.071 66.667 0.00 0.00 39.65 3.56
37 38 4.380945 TGGGGTCCTGCCAATGCC 62.381 66.667 0.00 0.00 39.65 4.40
38 39 4.380945 GGGGTCCTGCCAATGCCA 62.381 66.667 0.00 0.00 39.65 4.92
39 40 2.042639 GGGTCCTGCCAATGCCAT 60.043 61.111 0.00 0.00 39.65 4.40
40 41 1.229927 GGGTCCTGCCAATGCCATA 59.770 57.895 0.00 0.00 39.65 2.74
41 42 1.109323 GGGTCCTGCCAATGCCATAC 61.109 60.000 0.00 0.00 39.65 2.39
42 43 0.395586 GGTCCTGCCAATGCCATACA 60.396 55.000 0.00 0.00 37.17 2.29
43 44 1.696063 GTCCTGCCAATGCCATACAT 58.304 50.000 0.00 0.00 42.30 2.29
45 46 2.035066 GTCCTGCCAATGCCATACATTC 59.965 50.000 0.00 0.00 46.28 2.67
46 47 2.091720 TCCTGCCAATGCCATACATTCT 60.092 45.455 0.00 0.00 46.28 2.40
47 48 2.696707 CCTGCCAATGCCATACATTCTT 59.303 45.455 0.00 0.00 46.28 2.52
48 49 3.890756 CCTGCCAATGCCATACATTCTTA 59.109 43.478 0.00 0.00 46.28 2.10
49 50 4.022589 CCTGCCAATGCCATACATTCTTAG 60.023 45.833 0.00 0.00 46.28 2.18
50 51 3.890756 TGCCAATGCCATACATTCTTAGG 59.109 43.478 0.00 0.00 46.28 2.69
51 52 3.891366 GCCAATGCCATACATTCTTAGGT 59.109 43.478 0.00 0.00 46.28 3.08
52 53 4.261741 GCCAATGCCATACATTCTTAGGTG 60.262 45.833 0.00 0.00 46.28 4.00
53 54 4.261741 CCAATGCCATACATTCTTAGGTGC 60.262 45.833 0.00 0.00 46.28 5.01
54 55 2.560504 TGCCATACATTCTTAGGTGCG 58.439 47.619 0.00 0.00 0.00 5.34
55 56 2.169561 TGCCATACATTCTTAGGTGCGA 59.830 45.455 0.00 0.00 0.00 5.10
56 57 2.544267 GCCATACATTCTTAGGTGCGAC 59.456 50.000 0.00 0.00 0.00 5.19
57 58 2.794910 CCATACATTCTTAGGTGCGACG 59.205 50.000 0.00 0.00 0.00 5.12
58 59 2.572191 TACATTCTTAGGTGCGACGG 57.428 50.000 0.00 0.00 0.00 4.79
59 60 0.892755 ACATTCTTAGGTGCGACGGA 59.107 50.000 0.00 0.00 0.00 4.69
92 93 4.619227 ACGGGGTGCAACGTGGAG 62.619 66.667 10.95 0.00 42.39 3.86
95 96 2.203294 GGGTGCAACGTGGAGGTT 60.203 61.111 0.00 0.00 38.12 3.50
101 102 1.897398 GCAACGTGGAGGTTACGCTG 61.897 60.000 0.00 0.00 44.87 5.18
134 141 0.811616 GCAGCGGAGGAATCATCGTT 60.812 55.000 0.00 0.00 0.00 3.85
143 150 1.571919 GAATCATCGTTAGCGGCTGT 58.428 50.000 13.86 0.00 38.89 4.40
156 163 2.749441 GCTGTGCCTCCTTCTGCC 60.749 66.667 0.00 0.00 0.00 4.85
159 166 3.334054 GTGCCTCCTTCTGCCCCT 61.334 66.667 0.00 0.00 0.00 4.79
160 167 1.995626 GTGCCTCCTTCTGCCCCTA 60.996 63.158 0.00 0.00 0.00 3.53
161 168 1.004758 TGCCTCCTTCTGCCCCTAT 59.995 57.895 0.00 0.00 0.00 2.57
162 169 1.348008 TGCCTCCTTCTGCCCCTATG 61.348 60.000 0.00 0.00 0.00 2.23
163 170 2.061790 GCCTCCTTCTGCCCCTATGG 62.062 65.000 0.00 0.00 37.09 2.74
174 181 2.256591 CCCTATGGCACGCAGATGC 61.257 63.158 0.00 0.00 45.34 3.91
182 189 2.125912 ACGCAGATGCAGACCGAC 60.126 61.111 5.55 0.00 42.21 4.79
183 190 2.125952 CGCAGATGCAGACCGACA 60.126 61.111 5.55 0.00 42.21 4.35
184 191 2.163390 CGCAGATGCAGACCGACAG 61.163 63.158 5.55 0.00 42.21 3.51
185 192 2.459442 GCAGATGCAGACCGACAGC 61.459 63.158 0.00 0.00 41.59 4.40
196 203 3.257561 CGACAGCGGCAAGATCGG 61.258 66.667 1.45 0.00 0.00 4.18
198 205 4.393155 ACAGCGGCAAGATCGGCA 62.393 61.111 13.28 0.00 35.13 5.69
199 206 3.126879 CAGCGGCAAGATCGGCAA 61.127 61.111 13.28 0.00 35.13 4.52
200 207 2.821366 AGCGGCAAGATCGGCAAG 60.821 61.111 13.28 8.23 35.13 4.01
213 247 1.690219 CGGCAAGATCCCTACAGGCT 61.690 60.000 0.00 0.00 34.51 4.58
218 252 1.173444 AGATCCCTACAGGCTACGCG 61.173 60.000 3.53 3.53 34.51 6.01
224 258 0.307146 CTACAGGCTACGCGTCCTAC 59.693 60.000 18.63 4.85 0.00 3.18
225 259 0.392863 TACAGGCTACGCGTCCTACA 60.393 55.000 18.63 5.28 0.00 2.74
228 262 2.772691 GGCTACGCGTCCTACAGCT 61.773 63.158 25.17 0.00 32.78 4.24
231 265 1.140407 CTACGCGTCCTACAGCTTGC 61.140 60.000 18.63 0.00 0.00 4.01
276 310 1.443194 GCGACGCCGAGAAGTTACA 60.443 57.895 9.14 0.00 38.22 2.41
277 311 1.005294 GCGACGCCGAGAAGTTACAA 61.005 55.000 9.14 0.00 38.22 2.41
278 312 1.625616 CGACGCCGAGAAGTTACAAT 58.374 50.000 0.00 0.00 38.22 2.71
281 315 2.334838 ACGCCGAGAAGTTACAATGAC 58.665 47.619 0.00 0.00 0.00 3.06
282 316 2.288579 ACGCCGAGAAGTTACAATGACA 60.289 45.455 0.00 0.00 0.00 3.58
283 317 2.930040 CGCCGAGAAGTTACAATGACAT 59.070 45.455 0.00 0.00 0.00 3.06
284 318 3.242091 CGCCGAGAAGTTACAATGACATG 60.242 47.826 0.00 0.00 0.00 3.21
285 319 3.063997 GCCGAGAAGTTACAATGACATGG 59.936 47.826 0.00 0.00 0.00 3.66
286 320 4.503910 CCGAGAAGTTACAATGACATGGA 58.496 43.478 0.00 0.00 0.00 3.41
287 321 4.568359 CCGAGAAGTTACAATGACATGGAG 59.432 45.833 0.00 0.00 0.00 3.86
288 322 5.410924 CGAGAAGTTACAATGACATGGAGA 58.589 41.667 0.00 0.00 0.00 3.71
289 323 5.518128 CGAGAAGTTACAATGACATGGAGAG 59.482 44.000 0.00 0.00 0.00 3.20
295 329 2.079158 CAATGACATGGAGAGCAACGT 58.921 47.619 0.00 0.00 0.00 3.99
314 348 2.476051 GTGAACGTGCTCATGGCG 59.524 61.111 0.00 0.00 45.43 5.69
318 352 3.958147 AACGTGCTCATGGCGGAGG 62.958 63.158 7.91 0.00 45.43 4.30
319 353 4.147449 CGTGCTCATGGCGGAGGA 62.147 66.667 7.91 2.45 45.43 3.71
332 366 1.002011 GGAGGAGGGTTGGCTCAAC 60.002 63.158 8.94 8.94 42.89 3.18
333 367 1.376037 GAGGAGGGTTGGCTCAACG 60.376 63.158 10.63 0.00 44.36 4.10
335 369 1.376037 GGAGGGTTGGCTCAACGAG 60.376 63.158 10.63 0.00 44.36 4.18
344 378 4.094684 CTCAACGAGCACCGGATC 57.905 61.111 9.46 1.67 43.93 3.36
346 380 0.389817 CTCAACGAGCACCGGATCAA 60.390 55.000 9.46 0.00 43.93 2.57
347 381 0.249120 TCAACGAGCACCGGATCAAT 59.751 50.000 9.46 0.00 43.93 2.57
348 382 0.652592 CAACGAGCACCGGATCAATC 59.347 55.000 9.46 0.00 43.93 2.67
349 383 0.249120 AACGAGCACCGGATCAATCA 59.751 50.000 9.46 0.00 43.93 2.57
350 384 0.465705 ACGAGCACCGGATCAATCAT 59.534 50.000 9.46 0.00 43.93 2.45
356 390 0.465705 ACCGGATCAATCATCTGCGT 59.534 50.000 9.46 0.00 36.63 5.24
357 391 1.134401 ACCGGATCAATCATCTGCGTT 60.134 47.619 9.46 0.00 36.63 4.84
373 407 3.702048 TTTCGCGGTGGGGAGGAG 61.702 66.667 6.13 0.00 36.39 3.69
378 412 2.279073 CGGTGGGGAGGAGAGCTA 59.721 66.667 0.00 0.00 0.00 3.32
381 415 0.556747 GGTGGGGAGGAGAGCTACTA 59.443 60.000 0.00 0.00 0.00 1.82
396 430 1.409427 CTACTAAGCTGAAGGTCCCCG 59.591 57.143 0.00 0.00 0.00 5.73
401 435 1.153349 GCTGAAGGTCCCCGTGATC 60.153 63.158 0.00 0.00 0.00 2.92
405 439 2.017559 GAAGGTCCCCGTGATCCTCG 62.018 65.000 0.00 0.00 0.00 4.63
406 440 2.441532 GGTCCCCGTGATCCTCGA 60.442 66.667 8.60 0.00 0.00 4.04
407 441 2.783288 GGTCCCCGTGATCCTCGAC 61.783 68.421 8.60 0.00 0.00 4.20
411 445 1.753078 CCCGTGATCCTCGACTGGA 60.753 63.158 8.60 0.00 40.82 3.86
419 453 2.202797 CTCGACTGGATGGTGCCG 60.203 66.667 0.00 0.00 0.00 5.69
420 454 4.451150 TCGACTGGATGGTGCCGC 62.451 66.667 0.00 0.00 0.00 6.53
441 487 2.113986 GGGCAGCACCAACTGACT 59.886 61.111 0.00 0.00 45.64 3.41
444 490 0.250295 GGCAGCACCAACTGACTACA 60.250 55.000 0.00 0.00 42.83 2.74
449 495 2.093181 AGCACCAACTGACTACAACACA 60.093 45.455 0.00 0.00 0.00 3.72
450 496 2.878406 GCACCAACTGACTACAACACAT 59.122 45.455 0.00 0.00 0.00 3.21
453 499 2.813754 CCAACTGACTACAACACATGGG 59.186 50.000 0.00 0.00 0.00 4.00
454 500 2.185004 ACTGACTACAACACATGGGC 57.815 50.000 0.00 0.00 0.00 5.36
485 531 4.101448 GCTGCCCGGACCATCTGT 62.101 66.667 0.73 0.00 0.00 3.41
488 534 0.179073 CTGCCCGGACCATCTGTAAG 60.179 60.000 0.73 0.00 0.00 2.34
509 555 2.779282 CACCAACAGTCAGTGCACA 58.221 52.632 21.04 0.00 0.00 4.57
510 556 0.659427 CACCAACAGTCAGTGCACAG 59.341 55.000 21.04 11.93 0.00 3.66
512 558 1.141657 ACCAACAGTCAGTGCACAGAT 59.858 47.619 21.04 4.09 0.00 2.90
513 559 2.368548 ACCAACAGTCAGTGCACAGATA 59.631 45.455 21.04 0.00 0.00 1.98
515 561 3.814842 CCAACAGTCAGTGCACAGATAAA 59.185 43.478 21.04 0.00 0.00 1.40
519 565 4.512944 ACAGTCAGTGCACAGATAAAACAG 59.487 41.667 21.04 4.37 0.00 3.16
521 567 3.499918 GTCAGTGCACAGATAAAACAGCT 59.500 43.478 21.04 0.00 0.00 4.24
522 568 3.499537 TCAGTGCACAGATAAAACAGCTG 59.500 43.478 21.04 13.48 46.47 4.24
524 570 4.023792 CAGTGCACAGATAAAACAGCTGAA 60.024 41.667 23.35 2.81 43.68 3.02
525 571 4.214971 AGTGCACAGATAAAACAGCTGAAG 59.785 41.667 23.35 0.00 43.68 3.02
526 572 3.503363 TGCACAGATAAAACAGCTGAAGG 59.497 43.478 23.35 3.21 43.68 3.46
527 573 3.503748 GCACAGATAAAACAGCTGAAGGT 59.496 43.478 23.35 4.94 43.68 3.50
529 575 5.507985 GCACAGATAAAACAGCTGAAGGTTT 60.508 40.000 23.35 15.95 43.68 3.27
530 576 6.293955 GCACAGATAAAACAGCTGAAGGTTTA 60.294 38.462 23.35 17.45 43.68 2.01
532 578 7.805071 CACAGATAAAACAGCTGAAGGTTTAAG 59.195 37.037 23.35 13.71 43.68 1.85
533 579 7.502561 ACAGATAAAACAGCTGAAGGTTTAAGT 59.497 33.333 23.35 14.20 43.68 2.24
534 580 8.017946 CAGATAAAACAGCTGAAGGTTTAAGTC 58.982 37.037 23.35 12.90 43.68 3.01
535 581 5.515797 AAAACAGCTGAAGGTTTAAGTCC 57.484 39.130 23.35 0.00 36.28 3.85
536 582 4.439253 AACAGCTGAAGGTTTAAGTCCT 57.561 40.909 23.35 0.00 36.81 3.85
537 583 3.744660 ACAGCTGAAGGTTTAAGTCCTG 58.255 45.455 23.35 0.00 35.27 3.86
538 584 3.391296 ACAGCTGAAGGTTTAAGTCCTGA 59.609 43.478 23.35 0.00 35.27 3.86
539 585 4.141482 ACAGCTGAAGGTTTAAGTCCTGAA 60.141 41.667 23.35 0.00 35.27 3.02
540 586 4.214332 CAGCTGAAGGTTTAAGTCCTGAAC 59.786 45.833 8.42 0.00 35.27 3.18
552 631 3.030291 AGTCCTGAACTCAGAGGCTATG 58.970 50.000 8.33 1.88 46.59 2.23
553 632 2.763448 GTCCTGAACTCAGAGGCTATGT 59.237 50.000 9.24 0.00 46.59 2.29
575 654 0.967380 GCCAGTGCAACAAGGGCTAT 60.967 55.000 7.78 0.00 44.20 2.97
578 657 2.161855 CAGTGCAACAAGGGCTATGAA 58.838 47.619 0.00 0.00 41.43 2.57
581 660 4.348318 GTGCAACAAGGGCTATGAAGGC 62.348 54.545 0.00 0.00 41.83 4.35
598 677 0.815615 GGCAATCCTTACCTCAGCGG 60.816 60.000 0.00 0.00 39.35 5.52
617 696 1.226746 GCGGATGCCAAGGTATGTAC 58.773 55.000 0.00 0.00 33.98 2.90
618 697 1.474320 GCGGATGCCAAGGTATGTACA 60.474 52.381 0.00 0.00 33.98 2.90
619 698 2.810400 GCGGATGCCAAGGTATGTACAT 60.810 50.000 13.93 13.93 33.98 2.29
620 699 3.067106 CGGATGCCAAGGTATGTACATC 58.933 50.000 12.68 4.27 38.79 3.06
625 704 6.595716 GGATGCCAAGGTATGTACATCTTATC 59.404 42.308 12.68 9.96 39.18 1.75
626 705 5.538118 TGCCAAGGTATGTACATCTTATCG 58.462 41.667 12.68 3.39 0.00 2.92
627 706 4.929808 GCCAAGGTATGTACATCTTATCGG 59.070 45.833 12.68 9.19 0.00 4.18
629 708 5.245301 CCAAGGTATGTACATCTTATCGGGA 59.755 44.000 12.68 0.00 0.00 5.14
630 709 6.390721 CAAGGTATGTACATCTTATCGGGAG 58.609 44.000 12.68 0.00 0.00 4.30
631 710 4.463186 AGGTATGTACATCTTATCGGGAGC 59.537 45.833 12.68 1.02 0.00 4.70
632 711 4.219944 GGTATGTACATCTTATCGGGAGCA 59.780 45.833 12.68 0.00 0.00 4.26
633 712 3.728076 TGTACATCTTATCGGGAGCAC 57.272 47.619 0.00 0.00 0.00 4.40
634 713 2.364324 TGTACATCTTATCGGGAGCACC 59.636 50.000 0.00 0.00 0.00 5.01
636 715 1.414181 ACATCTTATCGGGAGCACCTG 59.586 52.381 1.96 1.96 43.52 4.00
637 716 1.414181 CATCTTATCGGGAGCACCTGT 59.586 52.381 9.00 0.00 42.77 4.00
649 728 1.665916 CACCTGTGCCTCAGTCGTG 60.666 63.158 5.51 4.05 42.19 4.35
650 729 2.740055 CCTGTGCCTCAGTCGTGC 60.740 66.667 5.51 0.00 42.19 5.34
653 732 2.740055 GTGCCTCAGTCGTGCCTG 60.740 66.667 0.00 0.00 0.00 4.85
655 734 2.343758 GCCTCAGTCGTGCCTGAA 59.656 61.111 0.00 0.00 40.78 3.02
656 735 1.301716 GCCTCAGTCGTGCCTGAAA 60.302 57.895 0.00 0.00 40.78 2.69
657 736 0.884704 GCCTCAGTCGTGCCTGAAAA 60.885 55.000 0.00 0.00 40.78 2.29
658 737 1.593196 CCTCAGTCGTGCCTGAAAAA 58.407 50.000 0.00 0.00 40.78 1.94
681 760 7.719778 AAAGCATTTCTTTTCAGTCCATTTC 57.280 32.000 0.00 0.00 42.06 2.17
682 761 5.787380 AGCATTTCTTTTCAGTCCATTTCC 58.213 37.500 0.00 0.00 0.00 3.13
683 762 5.541484 AGCATTTCTTTTCAGTCCATTTCCT 59.459 36.000 0.00 0.00 0.00 3.36
684 763 5.866092 GCATTTCTTTTCAGTCCATTTCCTC 59.134 40.000 0.00 0.00 0.00 3.71
685 764 6.517194 GCATTTCTTTTCAGTCCATTTCCTCA 60.517 38.462 0.00 0.00 0.00 3.86
686 765 6.639632 TTTCTTTTCAGTCCATTTCCTCAG 57.360 37.500 0.00 0.00 0.00 3.35
687 766 4.074970 TCTTTTCAGTCCATTTCCTCAGC 58.925 43.478 0.00 0.00 0.00 4.26
688 767 2.496899 TTCAGTCCATTTCCTCAGCC 57.503 50.000 0.00 0.00 0.00 4.85
689 768 0.250234 TCAGTCCATTTCCTCAGCCG 59.750 55.000 0.00 0.00 0.00 5.52
690 769 0.036010 CAGTCCATTTCCTCAGCCGT 60.036 55.000 0.00 0.00 0.00 5.68
691 770 1.207089 CAGTCCATTTCCTCAGCCGTA 59.793 52.381 0.00 0.00 0.00 4.02
692 771 2.119495 AGTCCATTTCCTCAGCCGTAT 58.881 47.619 0.00 0.00 0.00 3.06
693 772 2.158900 AGTCCATTTCCTCAGCCGTATG 60.159 50.000 0.00 0.00 0.00 2.39
694 773 2.115427 TCCATTTCCTCAGCCGTATGA 58.885 47.619 0.00 0.00 0.00 2.15
695 774 2.705658 TCCATTTCCTCAGCCGTATGAT 59.294 45.455 0.00 0.00 0.00 2.45
696 775 3.136443 TCCATTTCCTCAGCCGTATGATT 59.864 43.478 0.00 0.00 0.00 2.57
697 776 3.251729 CCATTTCCTCAGCCGTATGATTG 59.748 47.826 0.00 0.00 0.00 2.67
698 777 3.904800 TTTCCTCAGCCGTATGATTGA 57.095 42.857 0.00 0.00 0.00 2.57
699 778 3.459232 TTCCTCAGCCGTATGATTGAG 57.541 47.619 8.07 8.07 37.41 3.02
700 779 2.666317 TCCTCAGCCGTATGATTGAGA 58.334 47.619 13.91 2.54 39.46 3.27
701 780 2.625314 TCCTCAGCCGTATGATTGAGAG 59.375 50.000 13.91 7.19 39.46 3.20
702 781 2.625314 CCTCAGCCGTATGATTGAGAGA 59.375 50.000 13.91 0.00 39.46 3.10
704 783 4.262377 CCTCAGCCGTATGATTGAGAGATT 60.262 45.833 13.91 0.00 39.46 2.40
706 785 5.292765 TCAGCCGTATGATTGAGAGATTTC 58.707 41.667 0.00 0.00 0.00 2.17
707 786 4.149571 CAGCCGTATGATTGAGAGATTTCG 59.850 45.833 0.00 0.00 0.00 3.46
708 787 4.038042 AGCCGTATGATTGAGAGATTTCGA 59.962 41.667 0.00 0.00 0.00 3.71
711 790 6.586463 GCCGTATGATTGAGAGATTTCGATTA 59.414 38.462 0.00 0.00 0.00 1.75
712 791 7.276658 GCCGTATGATTGAGAGATTTCGATTAT 59.723 37.037 0.00 0.00 0.00 1.28
713 792 9.144747 CCGTATGATTGAGAGATTTCGATTATT 57.855 33.333 0.00 0.00 0.00 1.40
742 1597 9.138062 CATTTATATGTAGACATCAGAGAGTGC 57.862 37.037 0.00 0.00 37.76 4.40
744 1599 2.711542 TGTAGACATCAGAGAGTGCGA 58.288 47.619 0.00 0.00 0.00 5.10
755 1610 3.675225 CAGAGAGTGCGATCGAAAAGAAA 59.325 43.478 21.57 0.00 0.00 2.52
763 1618 4.023622 TGCGATCGAAAAGAAAAACATGGA 60.024 37.500 21.57 0.00 0.00 3.41
772 1627 3.157087 AGAAAAACATGGATGCTTCGGT 58.843 40.909 0.00 0.00 0.00 4.69
773 1628 3.057315 AGAAAAACATGGATGCTTCGGTG 60.057 43.478 0.00 0.00 0.00 4.94
778 1633 0.615331 ATGGATGCTTCGGTGACTGT 59.385 50.000 0.00 0.00 0.00 3.55
781 1636 1.608025 GGATGCTTCGGTGACTGTGAA 60.608 52.381 0.00 0.00 0.00 3.18
790 1645 2.483013 CGGTGACTGTGAAGAACTTCCA 60.483 50.000 11.30 8.26 38.77 3.53
793 1648 2.104792 TGACTGTGAAGAACTTCCAGGG 59.895 50.000 23.17 11.66 39.74 4.45
796 1651 1.070134 TGTGAAGAACTTCCAGGGACG 59.930 52.381 11.30 0.00 38.77 4.79
802 1657 1.343465 GAACTTCCAGGGACGTTCAGA 59.657 52.381 24.60 0.00 46.17 3.27
806 1661 1.450312 CCAGGGACGTTCAGATGCC 60.450 63.158 0.00 0.00 0.00 4.40
807 1662 1.296392 CAGGGACGTTCAGATGCCA 59.704 57.895 0.00 0.00 0.00 4.92
808 1663 0.742281 CAGGGACGTTCAGATGCCAG 60.742 60.000 0.00 0.00 0.00 4.85
816 1671 0.994247 TTCAGATGCCAGTGTCCCAT 59.006 50.000 0.00 0.00 0.00 4.00
836 1691 2.043953 GGACTGATGGCAACCCCC 60.044 66.667 0.00 0.00 0.00 5.40
854 1734 1.279846 CCCCACGGTAAACACAGGTAT 59.720 52.381 0.00 0.00 0.00 2.73
855 1735 2.500910 CCCCACGGTAAACACAGGTATA 59.499 50.000 0.00 0.00 0.00 1.47
856 1736 3.135167 CCCCACGGTAAACACAGGTATAT 59.865 47.826 0.00 0.00 0.00 0.86
858 1738 4.124238 CCACGGTAAACACAGGTATATGG 58.876 47.826 0.00 0.00 0.00 2.74
859 1739 4.383335 CCACGGTAAACACAGGTATATGGT 60.383 45.833 0.00 0.00 0.00 3.55
860 1740 5.180271 CACGGTAAACACAGGTATATGGTT 58.820 41.667 0.00 0.00 0.00 3.67
861 1741 5.064198 CACGGTAAACACAGGTATATGGTTG 59.936 44.000 0.00 0.00 0.00 3.77
863 1743 5.522460 CGGTAAACACAGGTATATGGTTGAG 59.478 44.000 0.00 0.00 0.00 3.02
864 1744 6.628621 CGGTAAACACAGGTATATGGTTGAGA 60.629 42.308 0.00 0.00 0.00 3.27
865 1745 7.107542 GGTAAACACAGGTATATGGTTGAGAA 58.892 38.462 0.00 0.00 0.00 2.87
867 1747 7.865706 AAACACAGGTATATGGTTGAGAATC 57.134 36.000 0.00 0.00 0.00 2.52
883 1763 5.946298 TGAGAATCACTGCATGTCAATTTC 58.054 37.500 0.00 0.00 42.56 2.17
886 1766 6.989659 AGAATCACTGCATGTCAATTTCTTT 58.010 32.000 0.00 0.00 0.00 2.52
887 1767 7.439381 AGAATCACTGCATGTCAATTTCTTTT 58.561 30.769 0.00 0.00 0.00 2.27
888 1768 8.579006 AGAATCACTGCATGTCAATTTCTTTTA 58.421 29.630 0.00 0.00 0.00 1.52
891 1771 9.793252 ATCACTGCATGTCAATTTCTTTTATAC 57.207 29.630 0.00 0.00 0.00 1.47
892 1772 8.791675 TCACTGCATGTCAATTTCTTTTATACA 58.208 29.630 0.00 0.00 0.00 2.29
893 1773 9.577110 CACTGCATGTCAATTTCTTTTATACAT 57.423 29.630 0.00 0.00 0.00 2.29
894 1774 9.577110 ACTGCATGTCAATTTCTTTTATACATG 57.423 29.630 0.00 0.00 43.39 3.21
950 2190 8.997621 TCTAACACAGTTACATCCTGATAAAC 57.002 34.615 0.00 0.00 34.04 2.01
951 2191 8.038944 TCTAACACAGTTACATCCTGATAAACC 58.961 37.037 0.00 0.00 34.04 3.27
952 2192 5.497474 ACACAGTTACATCCTGATAAACCC 58.503 41.667 0.00 0.00 34.04 4.11
954 2194 6.180472 CACAGTTACATCCTGATAAACCCTT 58.820 40.000 0.00 0.00 34.04 3.95
956 2196 6.012858 ACAGTTACATCCTGATAAACCCTTGA 60.013 38.462 0.00 0.00 34.04 3.02
957 2197 6.540189 CAGTTACATCCTGATAAACCCTTGAG 59.460 42.308 0.00 0.00 31.38 3.02
958 2198 6.215636 AGTTACATCCTGATAAACCCTTGAGT 59.784 38.462 0.00 0.00 0.00 3.41
959 2199 7.402071 AGTTACATCCTGATAAACCCTTGAGTA 59.598 37.037 0.00 0.00 0.00 2.59
991 2238 8.138712 TGGTGTGTATTGTTTAATTTTCAGGTC 58.861 33.333 0.00 0.00 0.00 3.85
995 2242 9.906660 GTGTATTGTTTAATTTTCAGGTCATCA 57.093 29.630 0.00 0.00 0.00 3.07
1000 2247 8.175925 TGTTTAATTTTCAGGTCATCATCACA 57.824 30.769 0.00 0.00 0.00 3.58
1017 2264 5.776208 TCATCACATGGGATTAATCATTGGG 59.224 40.000 8.02 11.50 0.00 4.12
1028 2275 2.276732 ATCATTGGGCTATCGGTTGG 57.723 50.000 0.00 0.00 0.00 3.77
1038 2285 1.339644 TATCGGTTGGTAGTGGCCCC 61.340 60.000 0.00 0.00 0.00 5.80
1075 2322 4.192317 GGTTCTTGGTGCACTCCTAATAG 58.808 47.826 17.98 4.22 0.00 1.73
1127 2374 9.727859 GAAGACTTTAAGGAGGAAGTTCTTTAT 57.272 33.333 2.25 0.00 36.31 1.40
1137 2384 5.769367 AGGAAGTTCTTTATTCAAAACCGC 58.231 37.500 2.25 0.00 0.00 5.68
1146 2393 1.096416 TTCAAAACCGCGGACAACTT 58.904 45.000 35.90 12.97 0.00 2.66
1152 2399 1.096416 ACCGCGGACAACTTTTGAAA 58.904 45.000 35.90 0.00 0.00 2.69
1200 2447 4.354893 AGCAGAGAGGATGATCATTTCC 57.645 45.455 10.14 8.51 0.00 3.13
1210 2457 5.547276 AGGATGATCATTTCCTTAGAGGAGG 59.453 44.000 10.14 0.00 46.73 4.30
1213 2460 5.280499 TGATCATTTCCTTAGAGGAGGTGA 58.720 41.667 12.65 12.65 46.73 4.02
1242 2489 7.659652 AGCTACTAATAATTTCGATCAAGCC 57.340 36.000 0.00 0.00 0.00 4.35
1269 2516 2.692368 GGTGGAGGAGGGCATGGA 60.692 66.667 0.00 0.00 0.00 3.41
1308 2555 6.944234 ATCTTGTCAGATCTACATGTCGTA 57.056 37.500 0.00 0.00 34.26 3.43
1325 2572 4.631377 TGTCGTAGCCATCAAGAAATCAAG 59.369 41.667 0.00 0.00 0.00 3.02
1330 2577 4.213513 AGCCATCAAGAAATCAAGGATCC 58.786 43.478 2.48 2.48 0.00 3.36
1344 2591 9.887862 AAATCAAGGATCCACCATAAGAATATT 57.112 29.630 15.82 0.00 42.04 1.28
1345 2592 8.874744 ATCAAGGATCCACCATAAGAATATTG 57.125 34.615 15.82 4.90 42.04 1.90
1380 2627 5.938322 GAAGAATTCATTAACGAGGTTGCA 58.062 37.500 8.44 0.00 46.62 4.08
1438 2685 2.363306 TCATGGTTGTTGCCTTGAGT 57.637 45.000 0.00 0.00 37.65 3.41
1449 2696 0.390472 GCCTTGAGTCAGAAGTCCCG 60.390 60.000 0.00 0.00 0.00 5.14
1665 2912 4.082274 TGCATTGACAGCAAAAGTATCG 57.918 40.909 0.00 0.00 39.39 2.92
1677 2924 2.693267 AAGTATCGGACTTTGGAGCC 57.307 50.000 0.00 0.00 46.79 4.70
1710 2966 7.227156 ACATTCTAGATCAAACTGGAACAACT 58.773 34.615 0.00 0.00 39.43 3.16
1865 3121 3.282021 GCATGTCCTCTGAAGGCAATTA 58.718 45.455 0.00 0.00 43.02 1.40
1885 3141 6.956299 ATTAGCTTGTCATGCAATTTGTTC 57.044 33.333 12.76 0.00 36.36 3.18
1933 3189 6.105333 GCAGATATACTGGATCCACAGATTC 58.895 44.000 11.44 5.78 45.82 2.52
1938 3194 2.503356 ACTGGATCCACAGATTCTGGAC 59.497 50.000 11.44 4.46 40.73 4.02
1995 3252 2.397252 GCGTCGTGCATCAAGCTC 59.603 61.111 0.00 0.00 45.94 4.09
2067 3325 1.078848 CCAAGAACCTGAGGAGCGG 60.079 63.158 4.99 0.00 0.00 5.52
2074 3332 1.374947 CCTGAGGAGCGGGTTTTGA 59.625 57.895 0.00 0.00 38.31 2.69
2096 3354 8.924511 TTGAGTCATTTGATAGAAGAAAACCT 57.075 30.769 0.00 0.00 0.00 3.50
2110 3368 5.859205 AGAAAACCTTCAGAAGCAACATT 57.141 34.783 4.41 0.00 33.64 2.71
2141 3399 6.128007 CCGAACTATCCAACAACTAGCAAAAT 60.128 38.462 0.00 0.00 0.00 1.82
2202 3460 4.471904 AGAAGAGTTCATGTTATCCGCA 57.528 40.909 0.00 0.00 0.00 5.69
2214 3472 1.672854 TATCCGCAAGACACCCTCGG 61.673 60.000 0.00 0.00 41.30 4.63
2221 3479 0.320697 AAGACACCCTCGGTAGTTGC 59.679 55.000 0.00 0.00 32.11 4.17
2222 3480 0.542232 AGACACCCTCGGTAGTTGCT 60.542 55.000 0.00 0.00 32.11 3.91
2237 3495 4.408182 AGTTGCTCTTACTTGTGAGTGT 57.592 40.909 0.00 0.00 36.60 3.55
2239 3497 5.290386 AGTTGCTCTTACTTGTGAGTGTAC 58.710 41.667 0.00 0.00 36.60 2.90
2242 3500 5.914033 TGCTCTTACTTGTGAGTGTACTTT 58.086 37.500 0.00 0.00 36.60 2.66
2269 3527 6.796426 TCTATAGATAGTGCATTATGGTCGC 58.204 40.000 6.44 0.00 0.00 5.19
2270 3528 2.677199 AGATAGTGCATTATGGTCGCG 58.323 47.619 6.44 0.00 0.00 5.87
2273 3531 1.502231 AGTGCATTATGGTCGCGATC 58.498 50.000 14.06 13.88 0.00 3.69
2282 3540 2.178474 TGGTCGCGATCGTTAGTTAC 57.822 50.000 14.06 6.10 36.96 2.50
2285 3543 2.107178 GTCGCGATCGTTAGTTACAGG 58.893 52.381 14.06 0.00 36.96 4.00
2290 3548 4.547532 GCGATCGTTAGTTACAGGATCAT 58.452 43.478 17.81 0.00 0.00 2.45
2292 3550 5.462398 GCGATCGTTAGTTACAGGATCATTT 59.538 40.000 17.81 0.00 0.00 2.32
2300 3558 4.946157 AGTTACAGGATCATTTGCTTGGAG 59.054 41.667 0.00 0.00 0.00 3.86
2304 3562 3.508793 CAGGATCATTTGCTTGGAGTGTT 59.491 43.478 0.00 0.00 0.00 3.32
2305 3563 4.021719 CAGGATCATTTGCTTGGAGTGTTT 60.022 41.667 0.00 0.00 0.00 2.83
2349 3607 8.841444 ATGTTGAAATCTCGTGTATTAATTGC 57.159 30.769 0.00 0.00 0.00 3.56
2350 3608 8.039603 TGTTGAAATCTCGTGTATTAATTGCT 57.960 30.769 0.00 0.00 0.00 3.91
2351 3609 8.511321 TGTTGAAATCTCGTGTATTAATTGCTT 58.489 29.630 0.00 0.00 0.00 3.91
2352 3610 9.341899 GTTGAAATCTCGTGTATTAATTGCTTT 57.658 29.630 0.00 0.00 0.00 3.51
2353 3611 9.906660 TTGAAATCTCGTGTATTAATTGCTTTT 57.093 25.926 0.00 0.00 0.00 2.27
2517 3781 4.682563 ACATAAACACCAAATGGATCCCA 58.317 39.130 9.90 0.00 38.94 4.37
2556 3829 8.310382 AGGACTAGCTCATGTATTGATGATAAC 58.690 37.037 0.00 0.00 31.88 1.89
2577 3850 9.449719 GATAACCTTGTTTTCTAGATCAAAGGA 57.550 33.333 21.67 8.44 0.00 3.36
2579 3852 7.511959 ACCTTGTTTTCTAGATCAAAGGAAC 57.488 36.000 21.67 8.76 0.00 3.62
2617 3890 5.895534 AGGATGCCAACAATAATGAGAACAT 59.104 36.000 0.00 0.00 38.50 2.71
2668 3941 5.815581 AGACCCAACTTATGAATTACTGCA 58.184 37.500 0.00 0.00 0.00 4.41
2748 4021 6.778821 TCATGTCCTTAGACCATGAGAAAAA 58.221 36.000 8.85 0.00 42.81 1.94
2756 4029 7.762615 CCTTAGACCATGAGAAAAACGTATACA 59.237 37.037 3.32 0.00 0.00 2.29
2759 4032 8.385898 AGACCATGAGAAAAACGTATACAAAA 57.614 30.769 3.32 0.00 0.00 2.44
2771 4044 7.562454 AACGTATACAAAAATACCAGATGGG 57.438 36.000 3.48 0.00 44.81 4.00
2783 4056 2.201830 CCAGATGGGTACTTTGGGGTA 58.798 52.381 0.00 0.00 0.00 3.69
2852 4126 6.581712 GGGTATACCGGAAAAGTATGTGTTA 58.418 40.000 15.80 0.00 36.71 2.41
2871 4146 9.719355 ATGTGTTAGTATTGATAGTTTCACACA 57.281 29.630 14.31 14.31 36.45 3.72
2876 4151 7.907214 AGTATTGATAGTTTCACACAAGGAC 57.093 36.000 0.00 0.00 32.84 3.85
2881 4156 2.024414 AGTTTCACACAAGGACTTGCC 58.976 47.619 11.73 0.00 44.03 4.52
2883 4158 0.550914 TTCACACAAGGACTTGCCCT 59.449 50.000 11.73 0.00 44.03 5.19
2889 4164 0.250727 CAAGGACTTGCCCTTCCGAA 60.251 55.000 0.00 0.00 44.30 4.30
2890 4165 0.476771 AAGGACTTGCCCTTCCGAAA 59.523 50.000 0.00 0.00 42.62 3.46
2966 4246 4.143452 GCGATACACATGTGATTGAGATCG 60.143 45.833 31.94 27.54 36.29 3.69
2970 4250 5.330455 ACACATGTGATTGAGATCGTAGT 57.670 39.130 31.94 1.18 34.91 2.73
3006 4286 7.235430 ACAGAAACGAGTAAAGAGAACAAAG 57.765 36.000 0.00 0.00 0.00 2.77
3023 4308 4.648651 ACAAAGCCGGTAACAAGATAACT 58.351 39.130 1.90 0.00 0.00 2.24
3024 4309 5.797051 ACAAAGCCGGTAACAAGATAACTA 58.203 37.500 1.90 0.00 0.00 2.24
3025 4310 6.412214 ACAAAGCCGGTAACAAGATAACTAT 58.588 36.000 1.90 0.00 0.00 2.12
3026 4311 7.558604 ACAAAGCCGGTAACAAGATAACTATA 58.441 34.615 1.90 0.00 0.00 1.31
3050 4335 1.398390 GTGATCAAGGTGTTCATCGCC 59.602 52.381 0.00 0.00 46.27 5.54
3056 4341 2.695314 GGTGTTCATCGCCAGGATC 58.305 57.895 0.00 0.00 45.32 3.36
3057 4342 0.179000 GGTGTTCATCGCCAGGATCT 59.821 55.000 0.00 0.00 45.32 2.75
3058 4343 1.576356 GTGTTCATCGCCAGGATCTC 58.424 55.000 0.00 0.00 31.28 2.75
3059 4344 1.137872 GTGTTCATCGCCAGGATCTCT 59.862 52.381 0.00 0.00 31.28 3.10
3060 4345 2.362397 GTGTTCATCGCCAGGATCTCTA 59.638 50.000 0.00 0.00 31.28 2.43
3061 4346 2.362397 TGTTCATCGCCAGGATCTCTAC 59.638 50.000 0.00 0.00 31.28 2.59
3062 4347 2.625790 GTTCATCGCCAGGATCTCTACT 59.374 50.000 0.00 0.00 31.28 2.57
3063 4348 3.790089 TCATCGCCAGGATCTCTACTA 57.210 47.619 0.00 0.00 31.28 1.82
3064 4349 4.308526 TCATCGCCAGGATCTCTACTAT 57.691 45.455 0.00 0.00 31.28 2.12
3065 4350 4.667573 TCATCGCCAGGATCTCTACTATT 58.332 43.478 0.00 0.00 31.28 1.73
3066 4351 4.460731 TCATCGCCAGGATCTCTACTATTG 59.539 45.833 0.00 0.00 31.28 1.90
3067 4352 4.100279 TCGCCAGGATCTCTACTATTGA 57.900 45.455 0.00 0.00 0.00 2.57
3068 4353 4.470602 TCGCCAGGATCTCTACTATTGAA 58.529 43.478 0.00 0.00 0.00 2.69
3069 4354 4.520874 TCGCCAGGATCTCTACTATTGAAG 59.479 45.833 0.00 0.00 0.00 3.02
3070 4355 4.520874 CGCCAGGATCTCTACTATTGAAGA 59.479 45.833 0.00 0.00 0.00 2.87
3071 4356 5.335583 CGCCAGGATCTCTACTATTGAAGAG 60.336 48.000 0.00 0.00 40.54 2.85
3072 4357 5.047377 GCCAGGATCTCTACTATTGAAGAGG 60.047 48.000 0.00 0.00 39.79 3.69
3073 4358 6.310941 CCAGGATCTCTACTATTGAAGAGGA 58.689 44.000 0.00 0.00 39.79 3.71
3074 4359 6.434028 CCAGGATCTCTACTATTGAAGAGGAG 59.566 46.154 0.00 0.00 39.79 3.69
3075 4360 7.004086 CAGGATCTCTACTATTGAAGAGGAGT 58.996 42.308 0.00 0.00 39.79 3.85
3076 4361 7.505585 CAGGATCTCTACTATTGAAGAGGAGTT 59.494 40.741 0.00 0.00 39.79 3.01
3077 4362 7.505585 AGGATCTCTACTATTGAAGAGGAGTTG 59.494 40.741 0.00 0.00 39.79 3.16
3078 4363 7.255801 GGATCTCTACTATTGAAGAGGAGTTGG 60.256 44.444 0.00 0.00 39.79 3.77
3079 4364 6.494952 TCTCTACTATTGAAGAGGAGTTGGT 58.505 40.000 0.00 0.00 39.79 3.67
3080 4365 6.378564 TCTCTACTATTGAAGAGGAGTTGGTG 59.621 42.308 0.00 0.00 39.79 4.17
3081 4366 6.017192 TCTACTATTGAAGAGGAGTTGGTGT 58.983 40.000 0.00 0.00 0.00 4.16
3082 4367 5.153950 ACTATTGAAGAGGAGTTGGTGTC 57.846 43.478 0.00 0.00 0.00 3.67
3083 4368 4.841246 ACTATTGAAGAGGAGTTGGTGTCT 59.159 41.667 0.00 0.00 0.00 3.41
3084 4369 3.475566 TTGAAGAGGAGTTGGTGTCTG 57.524 47.619 0.00 0.00 0.00 3.51
3085 4370 2.398588 TGAAGAGGAGTTGGTGTCTGT 58.601 47.619 0.00 0.00 0.00 3.41
3086 4371 3.572642 TGAAGAGGAGTTGGTGTCTGTA 58.427 45.455 0.00 0.00 0.00 2.74
3087 4372 3.321111 TGAAGAGGAGTTGGTGTCTGTAC 59.679 47.826 0.00 0.00 0.00 2.90
3088 4373 2.958818 AGAGGAGTTGGTGTCTGTACA 58.041 47.619 0.00 0.00 0.00 2.90
3089 4374 3.511477 AGAGGAGTTGGTGTCTGTACAT 58.489 45.455 0.00 0.00 38.08 2.29
3090 4375 3.511934 AGAGGAGTTGGTGTCTGTACATC 59.488 47.826 0.00 0.00 38.08 3.06
3091 4376 3.239449 AGGAGTTGGTGTCTGTACATCA 58.761 45.455 0.00 0.00 45.07 3.07
3092 4377 3.006967 AGGAGTTGGTGTCTGTACATCAC 59.993 47.826 17.51 17.51 46.38 3.06
3093 4378 3.006967 GGAGTTGGTGTCTGTACATCACT 59.993 47.826 21.93 9.48 46.38 3.41
3094 4379 4.219944 GGAGTTGGTGTCTGTACATCACTA 59.780 45.833 21.93 16.95 46.38 2.74
3095 4380 5.279306 GGAGTTGGTGTCTGTACATCACTAA 60.279 44.000 21.93 20.28 46.38 2.24
3096 4381 6.169557 AGTTGGTGTCTGTACATCACTAAA 57.830 37.500 21.80 16.47 46.38 1.85
3097 4382 6.769512 AGTTGGTGTCTGTACATCACTAAAT 58.230 36.000 21.80 19.61 46.38 1.40
3098 4383 6.650807 AGTTGGTGTCTGTACATCACTAAATG 59.349 38.462 21.80 0.57 46.38 2.32
3099 4384 6.109156 TGGTGTCTGTACATCACTAAATGT 57.891 37.500 21.93 0.00 41.87 2.71
3100 4385 5.931724 TGGTGTCTGTACATCACTAAATGTG 59.068 40.000 21.93 0.00 41.87 3.21
3101 4386 5.351465 GGTGTCTGTACATCACTAAATGTGG 59.649 44.000 21.93 0.00 46.20 4.17
3102 4387 5.932303 GTGTCTGTACATCACTAAATGTGGT 59.068 40.000 18.11 0.00 46.20 4.16
3103 4388 6.426937 GTGTCTGTACATCACTAAATGTGGTT 59.573 38.462 18.11 0.00 46.20 3.67
3104 4389 6.995686 TGTCTGTACATCACTAAATGTGGTTT 59.004 34.615 0.00 0.00 46.20 3.27
3105 4390 7.172532 TGTCTGTACATCACTAAATGTGGTTTC 59.827 37.037 0.00 0.00 46.20 2.78
3106 4391 6.367695 TCTGTACATCACTAAATGTGGTTTCG 59.632 38.462 0.00 0.00 46.20 3.46
3107 4392 5.992829 TGTACATCACTAAATGTGGTTTCGT 59.007 36.000 0.00 0.00 46.20 3.85
3108 4393 5.607119 ACATCACTAAATGTGGTTTCGTC 57.393 39.130 0.00 0.00 46.20 4.20
3109 4394 4.454504 ACATCACTAAATGTGGTTTCGTCC 59.545 41.667 0.00 0.00 46.20 4.79
3110 4395 3.404899 TCACTAAATGTGGTTTCGTCCC 58.595 45.455 0.00 0.00 46.20 4.46
3111 4396 2.486592 CACTAAATGTGGTTTCGTCCCC 59.513 50.000 0.00 0.00 42.68 4.81
3112 4397 2.089201 CTAAATGTGGTTTCGTCCCCC 58.911 52.381 0.00 0.00 0.00 5.40
3113 4398 0.481128 AAATGTGGTTTCGTCCCCCT 59.519 50.000 0.00 0.00 0.00 4.79
3114 4399 0.037734 AATGTGGTTTCGTCCCCCTC 59.962 55.000 0.00 0.00 0.00 4.30
3115 4400 1.848886 ATGTGGTTTCGTCCCCCTCC 61.849 60.000 0.00 0.00 0.00 4.30
3116 4401 2.931649 TGGTTTCGTCCCCCTCCC 60.932 66.667 0.00 0.00 0.00 4.30
3117 4402 3.725032 GGTTTCGTCCCCCTCCCC 61.725 72.222 0.00 0.00 0.00 4.81
3118 4403 2.609921 GTTTCGTCCCCCTCCCCT 60.610 66.667 0.00 0.00 0.00 4.79
3119 4404 2.208932 TTTCGTCCCCCTCCCCTT 59.791 61.111 0.00 0.00 0.00 3.95
3120 4405 2.228480 TTTCGTCCCCCTCCCCTTG 61.228 63.158 0.00 0.00 0.00 3.61
3121 4406 4.733725 TCGTCCCCCTCCCCTTGG 62.734 72.222 0.00 0.00 0.00 3.61
3123 4408 2.534533 GTCCCCCTCCCCTTGGTT 60.535 66.667 0.00 0.00 0.00 3.67
3124 4409 2.167729 GTCCCCCTCCCCTTGGTTT 61.168 63.158 0.00 0.00 0.00 3.27
3125 4410 2.167037 TCCCCCTCCCCTTGGTTTG 61.167 63.158 0.00 0.00 0.00 2.93
3126 4411 2.283894 CCCCTCCCCTTGGTTTGC 60.284 66.667 0.00 0.00 0.00 3.68
3127 4412 2.525592 CCCTCCCCTTGGTTTGCA 59.474 61.111 0.00 0.00 0.00 4.08
3128 4413 1.079073 CCCTCCCCTTGGTTTGCAT 59.921 57.895 0.00 0.00 0.00 3.96
3129 4414 0.334676 CCCTCCCCTTGGTTTGCATA 59.665 55.000 0.00 0.00 0.00 3.14
3130 4415 1.474330 CCTCCCCTTGGTTTGCATAC 58.526 55.000 0.00 0.00 0.00 2.39
3131 4416 1.272425 CCTCCCCTTGGTTTGCATACA 60.272 52.381 9.57 0.00 0.00 2.29
3132 4417 2.524306 CTCCCCTTGGTTTGCATACAA 58.476 47.619 9.57 4.11 0.00 2.41
3133 4418 2.493278 CTCCCCTTGGTTTGCATACAAG 59.507 50.000 9.57 12.70 40.85 3.16
3134 4419 2.109128 TCCCCTTGGTTTGCATACAAGA 59.891 45.455 20.55 5.09 43.13 3.02
3135 4420 2.896685 CCCCTTGGTTTGCATACAAGAA 59.103 45.455 20.55 6.37 43.13 2.52
3136 4421 3.323403 CCCCTTGGTTTGCATACAAGAAA 59.677 43.478 20.55 5.77 43.13 2.52
3137 4422 4.202305 CCCCTTGGTTTGCATACAAGAAAA 60.202 41.667 20.55 3.86 43.13 2.29
3138 4423 5.512921 CCCCTTGGTTTGCATACAAGAAAAT 60.513 40.000 20.55 0.00 43.13 1.82
3139 4424 6.295575 CCCCTTGGTTTGCATACAAGAAAATA 60.296 38.462 20.55 0.00 43.13 1.40
3140 4425 7.330262 CCCTTGGTTTGCATACAAGAAAATAT 58.670 34.615 20.55 0.00 43.13 1.28
3141 4426 7.278424 CCCTTGGTTTGCATACAAGAAAATATG 59.722 37.037 20.55 7.48 43.13 1.78
3142 4427 7.818930 CCTTGGTTTGCATACAAGAAAATATGT 59.181 33.333 20.55 0.00 43.13 2.29
3143 4428 8.755696 TTGGTTTGCATACAAGAAAATATGTC 57.244 30.769 9.57 0.00 37.04 3.06
3144 4429 7.319646 TGGTTTGCATACAAGAAAATATGTCC 58.680 34.615 9.57 0.00 37.04 4.02
3145 4430 7.178274 TGGTTTGCATACAAGAAAATATGTCCT 59.822 33.333 9.57 0.00 37.04 3.85
3146 4431 8.682710 GGTTTGCATACAAGAAAATATGTCCTA 58.317 33.333 9.57 0.00 37.04 2.94
3147 4432 9.503427 GTTTGCATACAAGAAAATATGTCCTAC 57.497 33.333 2.09 0.00 37.04 3.18
3148 4433 8.800370 TTGCATACAAGAAAATATGTCCTACA 57.200 30.769 0.00 0.00 32.37 2.74
3149 4434 8.800370 TGCATACAAGAAAATATGTCCTACAA 57.200 30.769 0.00 0.00 32.37 2.41
3150 4435 8.892723 TGCATACAAGAAAATATGTCCTACAAG 58.107 33.333 0.00 0.00 32.37 3.16
3151 4436 9.109393 GCATACAAGAAAATATGTCCTACAAGA 57.891 33.333 0.00 0.00 32.37 3.02
3191 4476 9.426837 TCAAATCATTGATTTCATTTCCTTGTC 57.573 29.630 19.34 0.00 39.82 3.18
3192 4477 8.377681 CAAATCATTGATTTCATTTCCTTGTCG 58.622 33.333 19.34 3.10 39.82 4.35
3193 4478 6.573664 TCATTGATTTCATTTCCTTGTCGT 57.426 33.333 0.00 0.00 0.00 4.34
3194 4479 7.680442 TCATTGATTTCATTTCCTTGTCGTA 57.320 32.000 0.00 0.00 0.00 3.43
3195 4480 7.526608 TCATTGATTTCATTTCCTTGTCGTAC 58.473 34.615 0.00 0.00 0.00 3.67
3196 4481 6.869315 TTGATTTCATTTCCTTGTCGTACA 57.131 33.333 0.00 0.00 0.00 2.90
3197 4482 6.869315 TGATTTCATTTCCTTGTCGTACAA 57.131 33.333 0.00 0.00 36.54 2.41
3212 4497 8.470040 TTGTCGTACAAGAAAATATGTCCTAC 57.530 34.615 0.00 0.00 32.34 3.18
3213 4498 7.604549 TGTCGTACAAGAAAATATGTCCTACA 58.395 34.615 0.00 0.00 0.00 2.74
3214 4499 8.255206 TGTCGTACAAGAAAATATGTCCTACAT 58.745 33.333 0.00 0.00 42.35 2.29
3215 4500 9.095065 GTCGTACAAGAAAATATGTCCTACATT 57.905 33.333 0.00 0.00 39.88 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.088914 CGATTGCATCGCCGTTGA 58.911 55.556 0.00 0.00 46.55 3.18
9 10 1.823899 GGACCCCACCGATTGCATC 60.824 63.158 0.00 0.00 0.00 3.91
10 11 2.275418 GGACCCCACCGATTGCAT 59.725 61.111 0.00 0.00 0.00 3.96
11 12 2.933287 AGGACCCCACCGATTGCA 60.933 61.111 0.00 0.00 34.73 4.08
13 14 2.438434 GCAGGACCCCACCGATTG 60.438 66.667 0.00 0.00 34.73 2.67
14 15 3.728373 GGCAGGACCCCACCGATT 61.728 66.667 0.00 0.00 34.73 3.34
17 18 4.047125 ATTGGCAGGACCCCACCG 62.047 66.667 0.00 0.00 37.83 4.94
18 19 2.362889 CATTGGCAGGACCCCACC 60.363 66.667 0.00 0.00 37.83 4.61
19 20 3.070576 GCATTGGCAGGACCCCAC 61.071 66.667 0.00 0.00 40.72 4.61
20 21 4.380945 GGCATTGGCAGGACCCCA 62.381 66.667 5.17 0.00 43.71 4.96
21 22 2.296945 TATGGCATTGGCAGGACCCC 62.297 60.000 18.37 0.00 42.43 4.95
22 23 1.109323 GTATGGCATTGGCAGGACCC 61.109 60.000 18.37 1.08 42.43 4.46
23 24 0.395586 TGTATGGCATTGGCAGGACC 60.396 55.000 18.37 6.65 42.43 4.46
24 25 1.696063 ATGTATGGCATTGGCAGGAC 58.304 50.000 18.37 17.37 42.43 3.85
25 26 2.091720 AGAATGTATGGCATTGGCAGGA 60.092 45.455 18.37 6.30 46.90 3.86
26 27 2.313317 AGAATGTATGGCATTGGCAGG 58.687 47.619 18.37 0.00 46.90 4.85
27 28 4.022589 CCTAAGAATGTATGGCATTGGCAG 60.023 45.833 18.37 0.91 46.90 4.85
28 29 3.890756 CCTAAGAATGTATGGCATTGGCA 59.109 43.478 15.86 15.86 46.90 4.92
29 30 3.891366 ACCTAAGAATGTATGGCATTGGC 59.109 43.478 4.78 2.73 46.90 4.52
30 31 4.261741 GCACCTAAGAATGTATGGCATTGG 60.262 45.833 4.78 0.00 46.90 3.16
31 32 4.555313 CGCACCTAAGAATGTATGGCATTG 60.555 45.833 4.78 0.00 46.90 2.82
33 34 3.141398 CGCACCTAAGAATGTATGGCAT 58.859 45.455 4.88 4.88 40.03 4.40
34 35 2.169561 TCGCACCTAAGAATGTATGGCA 59.830 45.455 0.00 0.00 0.00 4.92
35 36 2.544267 GTCGCACCTAAGAATGTATGGC 59.456 50.000 0.00 0.00 0.00 4.40
36 37 2.794910 CGTCGCACCTAAGAATGTATGG 59.205 50.000 0.00 0.00 0.00 2.74
37 38 2.794910 CCGTCGCACCTAAGAATGTATG 59.205 50.000 0.00 0.00 0.00 2.39
38 39 2.691526 TCCGTCGCACCTAAGAATGTAT 59.308 45.455 0.00 0.00 0.00 2.29
39 40 2.093890 TCCGTCGCACCTAAGAATGTA 58.906 47.619 0.00 0.00 0.00 2.29
40 41 0.892755 TCCGTCGCACCTAAGAATGT 59.107 50.000 0.00 0.00 0.00 2.71
41 42 2.004583 TTCCGTCGCACCTAAGAATG 57.995 50.000 0.00 0.00 0.00 2.67
42 43 2.344025 GTTTCCGTCGCACCTAAGAAT 58.656 47.619 0.00 0.00 0.00 2.40
43 44 1.787012 GTTTCCGTCGCACCTAAGAA 58.213 50.000 0.00 0.00 0.00 2.52
44 45 0.387622 CGTTTCCGTCGCACCTAAGA 60.388 55.000 0.00 0.00 0.00 2.10
45 46 0.387622 TCGTTTCCGTCGCACCTAAG 60.388 55.000 0.00 0.00 35.01 2.18
46 47 0.387622 CTCGTTTCCGTCGCACCTAA 60.388 55.000 0.00 0.00 35.01 2.69
47 48 1.210931 CTCGTTTCCGTCGCACCTA 59.789 57.895 0.00 0.00 35.01 3.08
48 49 2.049433 CTCGTTTCCGTCGCACCT 60.049 61.111 0.00 0.00 35.01 4.00
49 50 3.774702 GCTCGTTTCCGTCGCACC 61.775 66.667 0.00 0.00 33.83 5.01
50 51 2.717809 GAGCTCGTTTCCGTCGCAC 61.718 63.158 0.00 0.00 35.26 5.34
51 52 2.430244 GAGCTCGTTTCCGTCGCA 60.430 61.111 0.00 0.00 35.26 5.10
52 53 1.743855 GATGAGCTCGTTTCCGTCGC 61.744 60.000 10.42 0.00 35.01 5.19
53 54 1.140407 GGATGAGCTCGTTTCCGTCG 61.140 60.000 10.42 0.00 35.01 5.12
54 55 0.173708 AGGATGAGCTCGTTTCCGTC 59.826 55.000 18.93 3.64 33.35 4.79
55 56 0.173708 GAGGATGAGCTCGTTTCCGT 59.826 55.000 18.93 11.01 33.35 4.69
56 57 0.173481 TGAGGATGAGCTCGTTTCCG 59.827 55.000 18.93 0.00 33.35 4.30
57 58 1.646189 GTGAGGATGAGCTCGTTTCC 58.354 55.000 17.93 17.93 0.00 3.13
58 59 1.272781 CGTGAGGATGAGCTCGTTTC 58.727 55.000 10.42 11.52 0.00 2.78
59 60 3.425578 CGTGAGGATGAGCTCGTTT 57.574 52.632 10.42 1.52 0.00 3.60
90 91 1.352156 CCGTTCAGCAGCGTAACCTC 61.352 60.000 7.17 0.00 0.00 3.85
92 93 2.388232 CCCGTTCAGCAGCGTAACC 61.388 63.158 7.17 0.00 0.00 2.85
95 96 2.571757 CTCCCGTTCAGCAGCGTA 59.428 61.111 0.00 0.00 0.00 4.42
117 124 1.269831 GCTAACGATGATTCCTCCGCT 60.270 52.381 0.00 0.00 0.00 5.52
120 127 1.784525 CCGCTAACGATGATTCCTCC 58.215 55.000 0.00 0.00 43.93 4.30
121 128 1.140816 GCCGCTAACGATGATTCCTC 58.859 55.000 0.00 0.00 43.93 3.71
122 129 0.753262 AGCCGCTAACGATGATTCCT 59.247 50.000 0.00 0.00 43.93 3.36
123 130 0.861837 CAGCCGCTAACGATGATTCC 59.138 55.000 0.00 0.00 43.93 3.01
124 131 1.258982 CACAGCCGCTAACGATGATTC 59.741 52.381 0.00 0.00 43.93 2.52
125 132 1.290203 CACAGCCGCTAACGATGATT 58.710 50.000 0.00 0.00 43.93 2.57
126 133 1.154205 GCACAGCCGCTAACGATGAT 61.154 55.000 0.00 0.00 43.93 2.45
127 134 1.809619 GCACAGCCGCTAACGATGA 60.810 57.895 0.00 0.00 43.93 2.92
128 135 2.703409 GCACAGCCGCTAACGATG 59.297 61.111 0.00 0.00 43.93 3.84
143 150 1.004758 ATAGGGGCAGAAGGAGGCA 59.995 57.895 0.00 0.00 0.00 4.75
156 163 2.256591 GCATCTGCGTGCCATAGGG 61.257 63.158 0.00 0.00 39.18 3.53
159 166 0.811219 GTCTGCATCTGCGTGCCATA 60.811 55.000 6.15 0.00 44.43 2.74
160 167 2.110967 GTCTGCATCTGCGTGCCAT 61.111 57.895 6.15 0.00 44.43 4.40
161 168 2.743538 GTCTGCATCTGCGTGCCA 60.744 61.111 6.15 0.00 44.43 4.92
162 169 3.503363 GGTCTGCATCTGCGTGCC 61.503 66.667 6.15 0.00 44.43 5.01
163 170 3.857854 CGGTCTGCATCTGCGTGC 61.858 66.667 0.00 2.00 45.83 5.34
164 171 2.125952 TCGGTCTGCATCTGCGTG 60.126 61.111 0.00 0.00 45.83 5.34
165 172 2.125912 GTCGGTCTGCATCTGCGT 60.126 61.111 0.00 0.00 45.83 5.24
166 173 2.125952 TGTCGGTCTGCATCTGCG 60.126 61.111 0.00 0.00 45.83 5.18
168 175 2.163390 CGCTGTCGGTCTGCATCTG 61.163 63.158 5.18 0.00 40.30 2.90
169 176 2.182791 CGCTGTCGGTCTGCATCT 59.817 61.111 5.18 0.00 40.30 2.90
182 189 3.104602 CTTGCCGATCTTGCCGCTG 62.105 63.158 2.13 0.00 0.00 5.18
183 190 2.599645 ATCTTGCCGATCTTGCCGCT 62.600 55.000 2.13 0.00 0.00 5.52
184 191 2.110734 GATCTTGCCGATCTTGCCGC 62.111 60.000 5.99 0.00 44.21 6.53
185 192 1.502163 GGATCTTGCCGATCTTGCCG 61.502 60.000 11.46 0.00 46.33 5.69
189 196 2.366916 CTGTAGGGATCTTGCCGATCTT 59.633 50.000 11.46 5.13 46.33 2.40
190 197 1.967066 CTGTAGGGATCTTGCCGATCT 59.033 52.381 11.46 0.00 46.33 2.75
191 198 1.001406 CCTGTAGGGATCTTGCCGATC 59.999 57.143 4.89 4.89 46.37 3.69
193 200 1.686325 GCCTGTAGGGATCTTGCCGA 61.686 60.000 0.00 0.00 37.23 5.54
195 202 1.070914 GTAGCCTGTAGGGATCTTGCC 59.929 57.143 0.00 0.00 37.23 4.52
196 203 1.269831 CGTAGCCTGTAGGGATCTTGC 60.270 57.143 0.00 0.00 37.23 4.01
213 247 1.153901 GCAAGCTGTAGGACGCGTA 60.154 57.895 13.97 0.00 0.00 4.42
228 262 0.601576 TCGAACCGCTTAAGCTGCAA 60.602 50.000 24.33 3.29 39.32 4.08
231 265 0.716108 CTGTCGAACCGCTTAAGCTG 59.284 55.000 24.33 20.32 39.32 4.24
258 292 1.005294 TTGTAACTTCTCGGCGTCGC 61.005 55.000 9.22 9.22 36.13 5.19
262 296 2.333926 TGTCATTGTAACTTCTCGGCG 58.666 47.619 0.00 0.00 0.00 6.46
263 297 3.063997 CCATGTCATTGTAACTTCTCGGC 59.936 47.826 0.00 0.00 0.00 5.54
264 298 4.503910 TCCATGTCATTGTAACTTCTCGG 58.496 43.478 0.00 0.00 0.00 4.63
265 299 5.410924 TCTCCATGTCATTGTAACTTCTCG 58.589 41.667 0.00 0.00 0.00 4.04
271 305 4.436050 CGTTGCTCTCCATGTCATTGTAAC 60.436 45.833 0.00 0.00 0.00 2.50
272 306 3.684305 CGTTGCTCTCCATGTCATTGTAA 59.316 43.478 0.00 0.00 0.00 2.41
276 310 2.079158 CACGTTGCTCTCCATGTCATT 58.921 47.619 0.00 0.00 0.00 2.57
277 311 1.676916 CCACGTTGCTCTCCATGTCAT 60.677 52.381 0.00 0.00 0.00 3.06
278 312 0.320683 CCACGTTGCTCTCCATGTCA 60.321 55.000 0.00 0.00 0.00 3.58
281 315 0.320683 TCACCACGTTGCTCTCCATG 60.321 55.000 0.00 0.00 0.00 3.66
282 316 0.396435 TTCACCACGTTGCTCTCCAT 59.604 50.000 0.00 0.00 0.00 3.41
283 317 0.531974 GTTCACCACGTTGCTCTCCA 60.532 55.000 0.00 0.00 0.00 3.86
284 318 1.557443 CGTTCACCACGTTGCTCTCC 61.557 60.000 0.00 0.00 44.49 3.71
285 319 1.853319 CGTTCACCACGTTGCTCTC 59.147 57.895 0.00 0.00 44.49 3.20
286 320 4.027755 CGTTCACCACGTTGCTCT 57.972 55.556 0.00 0.00 44.49 4.09
295 329 1.965930 GCCATGAGCACGTTCACCA 60.966 57.895 0.00 0.00 42.97 4.17
309 343 3.411517 CCAACCCTCCTCCGCCAT 61.412 66.667 0.00 0.00 0.00 4.40
314 348 1.002011 GTTGAGCCAACCCTCCTCC 60.002 63.158 6.76 0.00 38.30 4.30
318 352 4.285851 CTCGTTGAGCCAACCCTC 57.714 61.111 11.06 0.00 40.82 4.30
332 366 1.143305 GATGATTGATCCGGTGCTCG 58.857 55.000 0.00 0.00 38.88 5.03
333 367 2.141517 CAGATGATTGATCCGGTGCTC 58.858 52.381 0.00 0.00 0.00 4.26
335 369 0.590195 GCAGATGATTGATCCGGTGC 59.410 55.000 0.00 0.00 0.00 5.01
336 370 0.863799 CGCAGATGATTGATCCGGTG 59.136 55.000 0.00 0.00 0.00 4.94
356 390 3.702048 CTCCTCCCCACCGCGAAA 61.702 66.667 8.23 0.00 0.00 3.46
357 391 4.689549 TCTCCTCCCCACCGCGAA 62.690 66.667 8.23 0.00 0.00 4.70
363 397 2.312390 CTTAGTAGCTCTCCTCCCCAC 58.688 57.143 0.00 0.00 0.00 4.61
384 418 2.908319 GAGGATCACGGGGACCTTCAG 61.908 61.905 5.17 0.00 41.16 3.02
396 430 1.115467 ACCATCCAGTCGAGGATCAC 58.885 55.000 3.28 0.00 45.16 3.06
401 435 2.187946 GGCACCATCCAGTCGAGG 59.812 66.667 0.00 0.00 0.00 4.63
405 439 3.127533 GTGCGGCACCATCCAGTC 61.128 66.667 22.19 0.00 0.00 3.51
420 454 4.954970 AGTTGGTGCTGCCCCGTG 62.955 66.667 0.00 0.00 36.04 4.94
425 459 0.250295 TGTAGTCAGTTGGTGCTGCC 60.250 55.000 0.00 0.00 36.49 4.85
428 462 2.093181 TGTGTTGTAGTCAGTTGGTGCT 60.093 45.455 0.00 0.00 0.00 4.40
434 468 2.158682 TGCCCATGTGTTGTAGTCAGTT 60.159 45.455 0.00 0.00 0.00 3.16
441 487 2.577490 GGCATGCCCATGTGTTGTA 58.423 52.632 27.24 0.00 40.80 2.41
470 516 0.616395 TCTTACAGATGGTCCGGGCA 60.616 55.000 9.07 0.00 0.00 5.36
472 518 0.105039 GCTCTTACAGATGGTCCGGG 59.895 60.000 0.00 0.00 0.00 5.73
473 519 0.824109 TGCTCTTACAGATGGTCCGG 59.176 55.000 0.00 0.00 0.00 5.14
485 531 3.111853 CACTGACTGTTGGTGCTCTTA 57.888 47.619 2.24 0.00 0.00 2.10
500 546 3.499537 CAGCTGTTTTATCTGTGCACTGA 59.500 43.478 25.98 25.98 0.00 3.41
507 553 7.502561 ACTTAAACCTTCAGCTGTTTTATCTGT 59.497 33.333 14.67 9.46 36.23 3.41
508 554 7.875971 ACTTAAACCTTCAGCTGTTTTATCTG 58.124 34.615 14.67 8.98 36.23 2.90
509 555 7.175119 GGACTTAAACCTTCAGCTGTTTTATCT 59.825 37.037 14.67 0.00 36.23 1.98
510 556 7.175119 AGGACTTAAACCTTCAGCTGTTTTATC 59.825 37.037 14.67 8.59 36.23 1.75
512 558 6.262273 CAGGACTTAAACCTTCAGCTGTTTTA 59.738 38.462 14.67 10.33 36.23 1.52
513 559 5.067805 CAGGACTTAAACCTTCAGCTGTTTT 59.932 40.000 14.67 11.26 36.23 2.43
515 561 4.137543 CAGGACTTAAACCTTCAGCTGTT 58.862 43.478 14.67 2.42 35.35 3.16
519 565 4.390264 AGTTCAGGACTTAAACCTTCAGC 58.610 43.478 0.00 0.00 33.92 4.26
521 567 5.365605 TCTGAGTTCAGGACTTAAACCTTCA 59.634 40.000 9.13 0.00 43.91 3.02
522 568 5.855045 TCTGAGTTCAGGACTTAAACCTTC 58.145 41.667 9.13 0.00 43.91 3.46
524 570 4.284746 CCTCTGAGTTCAGGACTTAAACCT 59.715 45.833 9.13 0.00 43.91 3.50
525 571 4.570930 CCTCTGAGTTCAGGACTTAAACC 58.429 47.826 9.13 0.00 43.91 3.27
526 572 3.997681 GCCTCTGAGTTCAGGACTTAAAC 59.002 47.826 9.13 0.00 43.91 2.01
527 573 3.904339 AGCCTCTGAGTTCAGGACTTAAA 59.096 43.478 9.13 0.00 43.91 1.52
529 575 3.176924 AGCCTCTGAGTTCAGGACTTA 57.823 47.619 9.13 0.00 43.91 2.24
530 576 2.022718 AGCCTCTGAGTTCAGGACTT 57.977 50.000 9.13 0.00 43.91 3.01
532 578 2.763448 ACATAGCCTCTGAGTTCAGGAC 59.237 50.000 9.13 0.19 43.91 3.85
533 579 3.107402 ACATAGCCTCTGAGTTCAGGA 57.893 47.619 9.13 0.00 43.91 3.86
534 580 3.902881 AACATAGCCTCTGAGTTCAGG 57.097 47.619 9.13 0.00 43.91 3.86
535 581 3.373439 GCAAACATAGCCTCTGAGTTCAG 59.627 47.826 3.66 2.69 45.08 3.02
536 582 3.338249 GCAAACATAGCCTCTGAGTTCA 58.662 45.455 3.66 0.00 0.00 3.18
559 638 2.440409 CTTCATAGCCCTTGTTGCACT 58.560 47.619 0.00 0.00 0.00 4.40
581 660 1.154205 CGCCGCTGAGGTAAGGATTG 61.154 60.000 0.00 0.00 43.70 2.67
584 663 3.458163 CCGCCGCTGAGGTAAGGA 61.458 66.667 0.00 0.00 43.70 3.36
598 677 1.226746 GTACATACCTTGGCATCCGC 58.773 55.000 0.00 0.00 37.44 5.54
613 692 2.364324 GGTGCTCCCGATAAGATGTACA 59.636 50.000 0.00 0.00 0.00 2.90
614 693 2.628657 AGGTGCTCCCGATAAGATGTAC 59.371 50.000 0.00 0.00 38.74 2.90
617 696 1.414181 ACAGGTGCTCCCGATAAGATG 59.586 52.381 0.00 0.00 38.74 2.90
618 697 1.414181 CACAGGTGCTCCCGATAAGAT 59.586 52.381 0.00 0.00 38.74 2.40
619 698 0.824109 CACAGGTGCTCCCGATAAGA 59.176 55.000 0.00 0.00 38.74 2.10
620 699 3.369381 CACAGGTGCTCCCGATAAG 57.631 57.895 0.00 0.00 38.74 1.73
636 715 2.740055 CAGGCACGACTGAGGCAC 60.740 66.667 0.00 0.00 40.97 5.01
637 716 2.917227 TCAGGCACGACTGAGGCA 60.917 61.111 0.00 0.00 42.26 4.75
658 737 6.042437 AGGAAATGGACTGAAAAGAAATGCTT 59.958 34.615 0.00 0.00 38.88 3.91
659 738 5.541484 AGGAAATGGACTGAAAAGAAATGCT 59.459 36.000 0.00 0.00 0.00 3.79
660 739 5.787380 AGGAAATGGACTGAAAAGAAATGC 58.213 37.500 0.00 0.00 0.00 3.56
661 740 6.985117 TGAGGAAATGGACTGAAAAGAAATG 58.015 36.000 0.00 0.00 0.00 2.32
662 741 6.294955 GCTGAGGAAATGGACTGAAAAGAAAT 60.295 38.462 0.00 0.00 0.00 2.17
663 742 5.010012 GCTGAGGAAATGGACTGAAAAGAAA 59.990 40.000 0.00 0.00 0.00 2.52
664 743 4.520492 GCTGAGGAAATGGACTGAAAAGAA 59.480 41.667 0.00 0.00 0.00 2.52
665 744 4.074970 GCTGAGGAAATGGACTGAAAAGA 58.925 43.478 0.00 0.00 0.00 2.52
666 745 3.192212 GGCTGAGGAAATGGACTGAAAAG 59.808 47.826 0.00 0.00 0.00 2.27
669 748 1.339055 CGGCTGAGGAAATGGACTGAA 60.339 52.381 0.00 0.00 0.00 3.02
671 750 0.036010 ACGGCTGAGGAAATGGACTG 60.036 55.000 0.00 0.00 0.00 3.51
672 751 1.568504 TACGGCTGAGGAAATGGACT 58.431 50.000 0.00 0.00 0.00 3.85
673 752 2.158957 TCATACGGCTGAGGAAATGGAC 60.159 50.000 0.00 0.00 0.00 4.02
674 753 2.115427 TCATACGGCTGAGGAAATGGA 58.885 47.619 0.00 0.00 0.00 3.41
675 754 2.620251 TCATACGGCTGAGGAAATGG 57.380 50.000 0.00 0.00 0.00 3.16
679 758 3.031013 TCTCAATCATACGGCTGAGGAA 58.969 45.455 0.00 0.00 36.71 3.36
680 759 2.625314 CTCTCAATCATACGGCTGAGGA 59.375 50.000 0.00 0.00 36.71 3.71
681 760 2.625314 TCTCTCAATCATACGGCTGAGG 59.375 50.000 0.00 0.00 36.71 3.86
682 761 3.998099 TCTCTCAATCATACGGCTGAG 57.002 47.619 0.00 0.00 37.28 3.35
683 762 4.944619 AATCTCTCAATCATACGGCTGA 57.055 40.909 0.00 0.00 0.00 4.26
684 763 4.149571 CGAAATCTCTCAATCATACGGCTG 59.850 45.833 0.00 0.00 0.00 4.85
685 764 4.038042 TCGAAATCTCTCAATCATACGGCT 59.962 41.667 0.00 0.00 0.00 5.52
686 765 4.299155 TCGAAATCTCTCAATCATACGGC 58.701 43.478 0.00 0.00 0.00 5.68
687 766 8.694975 ATAATCGAAATCTCTCAATCATACGG 57.305 34.615 0.00 0.00 0.00 4.02
716 795 9.138062 GCACTCTCTGATGTCTACATATAAATG 57.862 37.037 0.00 0.00 36.57 2.32
717 796 8.026026 CGCACTCTCTGATGTCTACATATAAAT 58.974 37.037 0.00 0.00 36.57 1.40
718 797 7.228706 TCGCACTCTCTGATGTCTACATATAAA 59.771 37.037 0.00 0.00 36.57 1.40
719 798 6.710744 TCGCACTCTCTGATGTCTACATATAA 59.289 38.462 0.00 0.00 36.57 0.98
721 800 5.066593 TCGCACTCTCTGATGTCTACATAT 58.933 41.667 0.00 0.00 36.57 1.78
722 801 4.451900 TCGCACTCTCTGATGTCTACATA 58.548 43.478 0.00 0.00 36.57 2.29
723 802 3.282885 TCGCACTCTCTGATGTCTACAT 58.717 45.455 0.00 0.00 39.70 2.29
730 1585 2.481903 TTCGATCGCACTCTCTGATG 57.518 50.000 11.09 0.00 0.00 3.07
735 1590 4.647291 TTTTCTTTTCGATCGCACTCTC 57.353 40.909 11.09 0.00 0.00 3.20
742 1597 5.003778 GCATCCATGTTTTTCTTTTCGATCG 59.996 40.000 9.36 9.36 0.00 3.69
744 1599 6.029346 AGCATCCATGTTTTTCTTTTCGAT 57.971 33.333 0.00 0.00 0.00 3.59
755 1610 1.812571 GTCACCGAAGCATCCATGTTT 59.187 47.619 0.00 0.00 33.80 2.83
763 1618 1.344438 TCTTCACAGTCACCGAAGCAT 59.656 47.619 0.00 0.00 36.83 3.79
772 1627 2.104792 CCCTGGAAGTTCTTCACAGTCA 59.895 50.000 19.33 8.29 0.00 3.41
773 1628 2.368875 TCCCTGGAAGTTCTTCACAGTC 59.631 50.000 19.33 5.26 0.00 3.51
778 1633 1.420430 ACGTCCCTGGAAGTTCTTCA 58.580 50.000 13.44 0.00 33.31 3.02
790 1645 1.194781 ACTGGCATCTGAACGTCCCT 61.195 55.000 0.00 0.00 0.00 4.20
793 1648 1.071605 GACACTGGCATCTGAACGTC 58.928 55.000 0.00 0.00 0.00 4.34
796 1651 0.036732 TGGGACACTGGCATCTGAAC 59.963 55.000 0.00 0.00 0.00 3.18
800 1655 4.659100 TCCCTATGGGACACTGGCATCT 62.659 54.545 0.42 0.00 46.17 2.90
802 1657 0.327480 TCCCTATGGGACACTGGCAT 60.327 55.000 0.42 0.00 46.17 4.40
816 1671 1.279025 GGGGTTGCCATCAGTCCCTA 61.279 60.000 0.00 0.00 37.89 3.53
836 1691 4.124238 CCATATACCTGTGTTTACCGTGG 58.876 47.826 0.00 0.00 0.00 4.94
837 1692 4.761975 ACCATATACCTGTGTTTACCGTG 58.238 43.478 0.00 0.00 0.00 4.94
838 1693 5.046448 TCAACCATATACCTGTGTTTACCGT 60.046 40.000 0.00 0.00 0.00 4.83
839 1694 5.421277 TCAACCATATACCTGTGTTTACCG 58.579 41.667 0.00 0.00 0.00 4.02
854 1734 4.847198 ACATGCAGTGATTCTCAACCATA 58.153 39.130 0.00 0.00 0.00 2.74
855 1735 3.693085 GACATGCAGTGATTCTCAACCAT 59.307 43.478 0.00 0.00 0.00 3.55
856 1736 3.076621 GACATGCAGTGATTCTCAACCA 58.923 45.455 0.00 0.00 0.00 3.67
858 1738 4.754372 TTGACATGCAGTGATTCTCAAC 57.246 40.909 0.00 0.00 0.00 3.18
859 1739 5.970317 AATTGACATGCAGTGATTCTCAA 57.030 34.783 0.00 0.00 0.00 3.02
860 1740 5.708697 AGAAATTGACATGCAGTGATTCTCA 59.291 36.000 0.00 0.00 0.00 3.27
861 1741 6.192234 AGAAATTGACATGCAGTGATTCTC 57.808 37.500 0.00 0.00 0.00 2.87
863 1743 7.647907 AAAAGAAATTGACATGCAGTGATTC 57.352 32.000 0.00 0.00 0.00 2.52
865 1745 9.793252 GTATAAAAGAAATTGACATGCAGTGAT 57.207 29.630 0.00 0.00 0.00 3.06
867 1747 8.969121 TGTATAAAAGAAATTGACATGCAGTG 57.031 30.769 0.00 0.00 0.00 3.66
868 1748 9.577110 CATGTATAAAAGAAATTGACATGCAGT 57.423 29.630 0.00 0.00 37.11 4.40
869 1749 9.577110 ACATGTATAAAAGAAATTGACATGCAG 57.423 29.630 11.03 0.00 44.06 4.41
926 2166 7.280205 GGGTTTATCAGGATGTAACTGTGTTAG 59.720 40.741 0.00 0.00 37.25 2.34
929 2169 5.250774 AGGGTTTATCAGGATGTAACTGTGT 59.749 40.000 0.00 0.00 37.25 3.72
931 2171 6.012858 TCAAGGGTTTATCAGGATGTAACTGT 60.013 38.462 0.00 0.00 37.25 3.55
933 2173 6.215636 ACTCAAGGGTTTATCAGGATGTAACT 59.784 38.462 0.00 0.00 37.40 2.24
934 2174 6.415573 ACTCAAGGGTTTATCAGGATGTAAC 58.584 40.000 0.00 0.00 37.40 2.50
935 2175 6.636454 ACTCAAGGGTTTATCAGGATGTAA 57.364 37.500 0.00 0.00 37.40 2.41
937 2177 6.636454 TTACTCAAGGGTTTATCAGGATGT 57.364 37.500 0.00 0.00 37.40 3.06
941 2181 8.850156 CCATATTTTACTCAAGGGTTTATCAGG 58.150 37.037 0.00 0.00 0.00 3.86
942 2182 9.408648 ACCATATTTTACTCAAGGGTTTATCAG 57.591 33.333 0.00 0.00 0.00 2.90
943 2183 9.184523 CACCATATTTTACTCAAGGGTTTATCA 57.815 33.333 0.00 0.00 0.00 2.15
944 2184 9.185680 ACACCATATTTTACTCAAGGGTTTATC 57.814 33.333 0.00 0.00 0.00 1.75
945 2185 8.966868 CACACCATATTTTACTCAAGGGTTTAT 58.033 33.333 0.00 0.00 0.00 1.40
946 2186 7.945664 ACACACCATATTTTACTCAAGGGTTTA 59.054 33.333 0.00 0.00 0.00 2.01
947 2187 6.780522 ACACACCATATTTTACTCAAGGGTTT 59.219 34.615 0.00 0.00 0.00 3.27
949 2189 5.887754 ACACACCATATTTTACTCAAGGGT 58.112 37.500 0.00 0.00 0.00 4.34
950 2190 8.405531 CAATACACACCATATTTTACTCAAGGG 58.594 37.037 0.00 0.00 0.00 3.95
951 2191 8.956426 ACAATACACACCATATTTTACTCAAGG 58.044 33.333 0.00 0.00 0.00 3.61
965 2209 8.012957 ACCTGAAAATTAAACAATACACACCA 57.987 30.769 0.00 0.00 0.00 4.17
991 2238 7.320399 CCAATGATTAATCCCATGTGATGATG 58.680 38.462 12.90 0.00 0.00 3.07
995 2242 4.529377 GCCCAATGATTAATCCCATGTGAT 59.471 41.667 12.90 0.00 0.00 3.06
1000 2247 5.195940 CGATAGCCCAATGATTAATCCCAT 58.804 41.667 12.90 0.00 0.00 4.00
1017 2264 0.532196 GGCCACTACCAACCGATAGC 60.532 60.000 0.00 0.00 0.00 2.97
1028 2275 1.610554 TAGAACGCAGGGGCCACTAC 61.611 60.000 7.53 0.00 36.38 2.73
1038 2285 4.527564 CAAGAACCAAAAGTAGAACGCAG 58.472 43.478 0.00 0.00 0.00 5.18
1075 2322 0.948678 TGTTGCTTAAGTTCACGGGC 59.051 50.000 4.02 0.00 0.00 6.13
1110 2357 7.255486 CGGTTTTGAATAAAGAACTTCCTCCTT 60.255 37.037 0.00 0.00 0.00 3.36
1127 2374 1.096416 AAGTTGTCCGCGGTTTTGAA 58.904 45.000 27.15 8.90 0.00 2.69
1137 2384 4.867608 ACCAATTGTTTCAAAAGTTGTCCG 59.132 37.500 4.43 0.00 0.00 4.79
1146 2393 7.147915 GCCCTATGAGATACCAATTGTTTCAAA 60.148 37.037 4.43 0.00 0.00 2.69
1152 2399 4.660303 TCTGCCCTATGAGATACCAATTGT 59.340 41.667 4.43 0.00 0.00 2.71
1227 2474 3.724374 CCTACGGGCTTGATCGAAATTA 58.276 45.455 0.00 0.00 0.00 1.40
1269 2516 5.071788 TGACAAGATCCCTTTGTAGACAGTT 59.928 40.000 0.00 0.00 0.00 3.16
1308 2555 4.213513 GGATCCTTGATTTCTTGATGGCT 58.786 43.478 3.84 0.00 0.00 4.75
1325 2572 7.911651 TCTCTCAATATTCTTATGGTGGATCC 58.088 38.462 4.20 4.20 0.00 3.36
1344 2591 9.875691 TTAATGAATTCTTCGATTTCTCTCTCA 57.124 29.630 7.05 0.00 0.00 3.27
1359 2606 5.957842 TTGCAACCTCGTTAATGAATTCT 57.042 34.783 7.05 0.00 0.00 2.40
1362 2609 6.823689 AGAGTATTGCAACCTCGTTAATGAAT 59.176 34.615 17.63 0.57 0.00 2.57
1371 2618 2.926200 CTGTGAGAGTATTGCAACCTCG 59.074 50.000 17.63 4.62 0.00 4.63
1380 2627 6.841229 TCCTATGGTTGATCTGTGAGAGTATT 59.159 38.462 0.00 0.00 0.00 1.89
1438 2685 1.906574 AGCCAATAACGGGACTTCTGA 59.093 47.619 0.00 0.00 0.00 3.27
1449 2696 7.771183 TGGAAATGAACTCATAAGCCAATAAC 58.229 34.615 5.92 0.00 35.10 1.89
1665 2912 1.219393 CCTCGAGGCTCCAAAGTCC 59.781 63.158 20.67 0.00 0.00 3.85
1677 2924 6.915300 CAGTTTGATCTAGAATGTACCTCGAG 59.085 42.308 5.13 5.13 0.00 4.04
1710 2966 4.323417 CAATAGTTCCTTGCACCACAGTA 58.677 43.478 0.00 0.00 0.00 2.74
1865 3121 4.325028 TGAACAAATTGCATGACAAGCT 57.675 36.364 4.08 0.00 42.87 3.74
1885 3141 5.163683 CCAGATTGCCATCTTCAAGTAGTTG 60.164 44.000 3.73 3.73 37.71 3.16
1911 3167 6.440010 CCAGAATCTGTGGATCCAGTATATCT 59.560 42.308 16.81 13.50 37.23 1.98
1933 3189 1.835494 TCACTACCTCCTTCGTCCAG 58.165 55.000 0.00 0.00 0.00 3.86
1938 3194 2.168496 TCCACTTCACTACCTCCTTCG 58.832 52.381 0.00 0.00 0.00 3.79
1995 3252 0.179111 TTGGTCGCTCTTCCGCTATG 60.179 55.000 0.00 0.00 0.00 2.23
2001 3258 1.734465 CTCATTGTTGGTCGCTCTTCC 59.266 52.381 0.00 0.00 0.00 3.46
2054 3312 0.537371 CAAAACCCGCTCCTCAGGTT 60.537 55.000 0.00 0.00 45.79 3.50
2067 3325 9.965824 TTTTCTTCTATCAAATGACTCAAAACC 57.034 29.630 0.00 0.00 0.00 3.27
2096 3354 3.243035 CGGTGTTGAATGTTGCTTCTGAA 60.243 43.478 0.00 0.00 0.00 3.02
2110 3368 3.755112 TGTTGGATAGTTCGGTGTTGA 57.245 42.857 0.00 0.00 0.00 3.18
2141 3399 1.280710 TCGCTTCCCCTTGCTTTGATA 59.719 47.619 0.00 0.00 0.00 2.15
2202 3460 0.320697 GCAACTACCGAGGGTGTCTT 59.679 55.000 0.00 0.00 36.19 3.01
2214 3472 5.290386 ACACTCACAAGTAAGAGCAACTAC 58.710 41.667 0.00 0.00 35.28 2.73
2221 3479 8.085296 AGATCAAAGTACACTCACAAGTAAGAG 58.915 37.037 0.00 0.00 37.87 2.85
2222 3480 7.952671 AGATCAAAGTACACTCACAAGTAAGA 58.047 34.615 0.00 0.00 33.25 2.10
2242 3500 8.624776 CGACCATAATGCACTATCTATAGATCA 58.375 37.037 18.59 10.90 36.05 2.92
2262 3520 2.097954 TGTAACTAACGATCGCGACCAT 59.902 45.455 12.93 0.00 41.64 3.55
2264 3522 2.107178 CTGTAACTAACGATCGCGACC 58.893 52.381 12.93 0.00 41.64 4.79
2267 3525 2.463553 TCCTGTAACTAACGATCGCG 57.536 50.000 16.60 0.00 44.79 5.87
2269 3527 6.562270 GCAAATGATCCTGTAACTAACGATCG 60.562 42.308 14.88 14.88 31.26 3.69
2270 3528 6.480320 AGCAAATGATCCTGTAACTAACGATC 59.520 38.462 0.00 0.00 0.00 3.69
2273 3531 6.250819 CAAGCAAATGATCCTGTAACTAACG 58.749 40.000 0.00 0.00 0.00 3.18
2282 3540 3.087031 ACACTCCAAGCAAATGATCCTG 58.913 45.455 0.00 0.00 0.00 3.86
2324 3582 8.677300 AGCAATTAATACACGAGATTTCAACAT 58.323 29.630 0.00 0.00 0.00 2.71
2325 3583 8.039603 AGCAATTAATACACGAGATTTCAACA 57.960 30.769 0.00 0.00 0.00 3.33
2326 3584 8.895932 AAGCAATTAATACACGAGATTTCAAC 57.104 30.769 0.00 0.00 0.00 3.18
2353 3611 9.679661 TGCCTCTAAGACATATTTTGAACATTA 57.320 29.630 0.00 0.00 0.00 1.90
2354 3612 8.579850 TGCCTCTAAGACATATTTTGAACATT 57.420 30.769 0.00 0.00 0.00 2.71
2476 3740 1.665679 GTTTCCACACATGCGATCGAT 59.334 47.619 21.57 0.00 0.00 3.59
2479 3743 4.614555 TTATGTTTCCACACATGCGATC 57.385 40.909 0.00 0.00 37.93 3.69
2482 3746 3.668191 GTGTTTATGTTTCCACACATGCG 59.332 43.478 0.00 0.00 39.51 4.73
2517 3781 2.962421 GCTAGTCCTAGAGGCATGACTT 59.038 50.000 0.41 0.00 38.85 3.01
2556 3829 7.229506 ACAGTTCCTTTGATCTAGAAAACAAGG 59.770 37.037 13.52 13.52 0.00 3.61
2567 3840 7.963532 TGTTACTCTAACAGTTCCTTTGATCT 58.036 34.615 0.00 0.00 43.23 2.75
2705 3978 9.476202 GGACATGAGTAAAAGCTTAAAATTTGT 57.524 29.630 0.00 0.00 0.00 2.83
2706 3979 9.696917 AGGACATGAGTAAAAGCTTAAAATTTG 57.303 29.630 0.00 0.00 0.00 2.32
2711 3984 9.216117 GTCTAAGGACATGAGTAAAAGCTTAAA 57.784 33.333 0.00 0.00 41.75 1.52
2716 3989 5.488341 TGGTCTAAGGACATGAGTAAAAGC 58.512 41.667 0.00 0.00 43.77 3.51
2727 4000 4.994852 CGTTTTTCTCATGGTCTAAGGACA 59.005 41.667 0.00 0.00 43.77 4.02
2746 4019 7.992008 CCCATCTGGTATTTTTGTATACGTTT 58.008 34.615 0.00 0.00 32.85 3.60
2783 4056 2.108250 AGTTATGGTGTGACCTTTGGCT 59.892 45.455 0.00 0.00 39.58 4.75
2849 4123 9.431887 TCCTTGTGTGAAACTATCAATACTAAC 57.568 33.333 0.00 0.00 40.50 2.34
2852 4126 7.680730 AGTCCTTGTGTGAAACTATCAATACT 58.319 34.615 0.00 0.00 40.50 2.12
2865 4140 0.550914 AAGGGCAAGTCCTTGTGTGA 59.449 50.000 4.94 0.00 44.78 3.58
2866 4141 0.954452 GAAGGGCAAGTCCTTGTGTG 59.046 55.000 11.25 0.00 46.31 3.82
2868 4143 1.237285 CGGAAGGGCAAGTCCTTGTG 61.237 60.000 11.25 0.00 46.31 3.33
2876 4151 2.819608 TCTTCATTTTCGGAAGGGCAAG 59.180 45.455 0.00 0.00 41.59 4.01
2881 4156 6.836577 GAGTATCTCTTCATTTTCGGAAGG 57.163 41.667 0.00 0.00 41.59 3.46
2907 4182 0.249322 CGTAATACCGAGTGGGCCTG 60.249 60.000 4.53 0.00 40.62 4.85
2947 4222 6.094881 TCACTACGATCTCAATCACATGTGTA 59.905 38.462 24.63 12.43 31.76 2.90
2966 4246 9.388346 CTCGTTTCTGTATTCTGATATCACTAC 57.612 37.037 0.00 5.09 0.00 2.73
3006 4286 9.136952 CACTATTATAGTTATCTTGTTACCGGC 57.863 37.037 0.00 0.00 36.76 6.13
3023 4308 7.598869 GCGATGAACACCTTGATCACTATTATA 59.401 37.037 0.00 0.00 31.96 0.98
3024 4309 6.425114 GCGATGAACACCTTGATCACTATTAT 59.575 38.462 0.00 0.00 31.96 1.28
3025 4310 5.753438 GCGATGAACACCTTGATCACTATTA 59.247 40.000 0.00 0.00 31.96 0.98
3026 4311 4.572389 GCGATGAACACCTTGATCACTATT 59.428 41.667 0.00 0.00 31.96 1.73
3044 4329 4.460731 TCAATAGTAGAGATCCTGGCGATG 59.539 45.833 0.00 0.00 0.00 3.84
3050 4335 7.004086 ACTCCTCTTCAATAGTAGAGATCCTG 58.996 42.308 0.00 0.00 40.56 3.86
3056 4341 6.153680 ACACCAACTCCTCTTCAATAGTAGAG 59.846 42.308 0.00 0.00 38.57 2.43
3057 4342 6.017192 ACACCAACTCCTCTTCAATAGTAGA 58.983 40.000 0.00 0.00 0.00 2.59
3058 4343 6.153680 AGACACCAACTCCTCTTCAATAGTAG 59.846 42.308 0.00 0.00 0.00 2.57
3059 4344 6.017192 AGACACCAACTCCTCTTCAATAGTA 58.983 40.000 0.00 0.00 0.00 1.82
3060 4345 4.841246 AGACACCAACTCCTCTTCAATAGT 59.159 41.667 0.00 0.00 0.00 2.12
3061 4346 5.174395 CAGACACCAACTCCTCTTCAATAG 58.826 45.833 0.00 0.00 0.00 1.73
3062 4347 4.593206 ACAGACACCAACTCCTCTTCAATA 59.407 41.667 0.00 0.00 0.00 1.90
3063 4348 3.392616 ACAGACACCAACTCCTCTTCAAT 59.607 43.478 0.00 0.00 0.00 2.57
3064 4349 2.771943 ACAGACACCAACTCCTCTTCAA 59.228 45.455 0.00 0.00 0.00 2.69
3065 4350 2.398588 ACAGACACCAACTCCTCTTCA 58.601 47.619 0.00 0.00 0.00 3.02
3066 4351 3.321111 TGTACAGACACCAACTCCTCTTC 59.679 47.826 0.00 0.00 0.00 2.87
3067 4352 3.305720 TGTACAGACACCAACTCCTCTT 58.694 45.455 0.00 0.00 0.00 2.85
3068 4353 2.958818 TGTACAGACACCAACTCCTCT 58.041 47.619 0.00 0.00 0.00 3.69
3069 4354 3.258372 TGATGTACAGACACCAACTCCTC 59.742 47.826 0.33 0.00 38.76 3.71
3070 4355 3.006967 GTGATGTACAGACACCAACTCCT 59.993 47.826 18.99 0.00 38.76 3.69
3071 4356 3.006967 AGTGATGTACAGACACCAACTCC 59.993 47.826 23.26 6.05 38.76 3.85
3072 4357 4.258702 AGTGATGTACAGACACCAACTC 57.741 45.455 23.26 6.41 38.76 3.01
3073 4358 5.801531 TTAGTGATGTACAGACACCAACT 57.198 39.130 23.26 13.02 38.76 3.16
3074 4359 6.426937 ACATTTAGTGATGTACAGACACCAAC 59.573 38.462 23.26 7.38 38.43 3.77
3075 4360 6.530120 ACATTTAGTGATGTACAGACACCAA 58.470 36.000 23.26 17.15 38.43 3.67
3076 4361 6.109156 ACATTTAGTGATGTACAGACACCA 57.891 37.500 23.26 13.37 38.43 4.17
3091 4376 2.553685 GGGGGACGAAACCACATTTAGT 60.554 50.000 0.00 0.00 38.67 2.24
3092 4377 2.089201 GGGGGACGAAACCACATTTAG 58.911 52.381 0.00 0.00 34.56 1.85
3093 4378 1.706305 AGGGGGACGAAACCACATTTA 59.294 47.619 0.00 0.00 34.56 1.40
3094 4379 0.481128 AGGGGGACGAAACCACATTT 59.519 50.000 0.00 0.00 34.56 2.32
3095 4380 0.037734 GAGGGGGACGAAACCACATT 59.962 55.000 0.00 0.00 34.56 2.71
3096 4381 1.683441 GAGGGGGACGAAACCACAT 59.317 57.895 0.00 0.00 34.56 3.21
3097 4382 2.522367 GGAGGGGGACGAAACCACA 61.522 63.158 0.00 0.00 34.56 4.17
3098 4383 2.350134 GGAGGGGGACGAAACCAC 59.650 66.667 0.00 0.00 0.00 4.16
3099 4384 2.931649 GGGAGGGGGACGAAACCA 60.932 66.667 0.00 0.00 0.00 3.67
3100 4385 3.725032 GGGGAGGGGGACGAAACC 61.725 72.222 0.00 0.00 0.00 3.27
3101 4386 2.229203 AAGGGGAGGGGGACGAAAC 61.229 63.158 0.00 0.00 0.00 2.78
3102 4387 2.208932 AAGGGGAGGGGGACGAAA 59.791 61.111 0.00 0.00 0.00 3.46
3103 4388 2.609610 CAAGGGGAGGGGGACGAA 60.610 66.667 0.00 0.00 0.00 3.85
3104 4389 4.733725 CCAAGGGGAGGGGGACGA 62.734 72.222 0.00 0.00 35.59 4.20
3106 4391 2.167729 AAACCAAGGGGAGGGGGAC 61.168 63.158 0.00 0.00 38.05 4.46
3107 4392 2.167037 CAAACCAAGGGGAGGGGGA 61.167 63.158 0.00 0.00 38.05 4.81
3108 4393 2.445155 CAAACCAAGGGGAGGGGG 59.555 66.667 0.00 0.00 38.05 5.40
3109 4394 2.283894 GCAAACCAAGGGGAGGGG 60.284 66.667 0.00 0.00 38.05 4.79
3110 4395 0.334676 TATGCAAACCAAGGGGAGGG 59.665 55.000 0.00 0.00 38.05 4.30
3111 4396 1.272425 TGTATGCAAACCAAGGGGAGG 60.272 52.381 0.00 0.00 38.05 4.30
3112 4397 2.214376 TGTATGCAAACCAAGGGGAG 57.786 50.000 0.00 0.00 38.05 4.30
3113 4398 2.109128 TCTTGTATGCAAACCAAGGGGA 59.891 45.455 17.89 3.03 36.94 4.81
3114 4399 2.524306 TCTTGTATGCAAACCAAGGGG 58.476 47.619 17.89 0.00 36.94 4.79
3115 4400 4.599047 TTTCTTGTATGCAAACCAAGGG 57.401 40.909 17.89 0.00 36.94 3.95
3116 4401 7.818930 ACATATTTTCTTGTATGCAAACCAAGG 59.181 33.333 17.89 7.36 36.94 3.61
3117 4402 8.761575 ACATATTTTCTTGTATGCAAACCAAG 57.238 30.769 14.03 14.03 37.51 3.61
3118 4403 7.816995 GGACATATTTTCTTGTATGCAAACCAA 59.183 33.333 0.00 0.00 33.73 3.67
3119 4404 7.178274 AGGACATATTTTCTTGTATGCAAACCA 59.822 33.333 0.00 0.00 33.73 3.67
3120 4405 7.547227 AGGACATATTTTCTTGTATGCAAACC 58.453 34.615 0.00 0.00 33.73 3.27
3121 4406 9.503427 GTAGGACATATTTTCTTGTATGCAAAC 57.497 33.333 0.00 0.00 33.73 2.93
3122 4407 9.237187 TGTAGGACATATTTTCTTGTATGCAAA 57.763 29.630 0.00 0.00 33.73 3.68
3123 4408 8.800370 TGTAGGACATATTTTCTTGTATGCAA 57.200 30.769 0.00 0.00 32.77 4.08
3124 4409 8.800370 TTGTAGGACATATTTTCTTGTATGCA 57.200 30.769 0.00 0.00 32.77 3.96
3125 4410 9.109393 TCTTGTAGGACATATTTTCTTGTATGC 57.891 33.333 0.00 0.00 32.77 3.14
3165 4450 9.426837 GACAAGGAAATGAAATCAATGATTTGA 57.573 29.630 24.04 17.17 41.56 2.69
3166 4451 8.377681 CGACAAGGAAATGAAATCAATGATTTG 58.622 33.333 24.04 10.67 41.56 2.32
3167 4452 8.090214 ACGACAAGGAAATGAAATCAATGATTT 58.910 29.630 19.88 19.88 43.77 2.17
3168 4453 7.605449 ACGACAAGGAAATGAAATCAATGATT 58.395 30.769 2.07 2.07 33.25 2.57
3169 4454 7.161773 ACGACAAGGAAATGAAATCAATGAT 57.838 32.000 0.00 0.00 0.00 2.45
3170 4455 6.573664 ACGACAAGGAAATGAAATCAATGA 57.426 33.333 0.00 0.00 0.00 2.57
3171 4456 7.304735 TGTACGACAAGGAAATGAAATCAATG 58.695 34.615 0.00 0.00 0.00 2.82
3172 4457 7.447374 TGTACGACAAGGAAATGAAATCAAT 57.553 32.000 0.00 0.00 0.00 2.57
3173 4458 6.869315 TGTACGACAAGGAAATGAAATCAA 57.131 33.333 0.00 0.00 0.00 2.57
3174 4459 6.869315 TTGTACGACAAGGAAATGAAATCA 57.131 33.333 0.00 0.00 32.34 2.57
3187 4472 8.089597 TGTAGGACATATTTTCTTGTACGACAA 58.910 33.333 0.00 0.00 38.73 3.18
3188 4473 7.604549 TGTAGGACATATTTTCTTGTACGACA 58.395 34.615 0.00 0.00 39.17 4.35
3189 4474 8.644318 ATGTAGGACATATTTTCTTGTACGAC 57.356 34.615 0.00 0.00 36.99 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.