Multiple sequence alignment - TraesCS7D01G002200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G002200 chr7D 100.000 3113 0 0 1 3113 1529070 1525958 0.000000e+00 5749.0
1 TraesCS7D01G002200 chr7D 95.000 480 22 1 2473 2952 522867585 522868062 0.000000e+00 752.0
2 TraesCS7D01G002200 chr7D 83.081 396 36 16 2087 2456 223730911 223730521 6.430000e-87 331.0
3 TraesCS7D01G002200 chr7D 84.104 346 41 5 2087 2419 126735099 126735443 3.870000e-84 322.0
4 TraesCS7D01G002200 chr7D 81.937 382 46 13 2063 2424 382648422 382648800 5.050000e-78 302.0
5 TraesCS7D01G002200 chr7D 94.000 50 2 1 82 131 633208241 633208289 1.200000e-09 75.0
6 TraesCS7D01G002200 chr7B 94.065 2005 64 24 112 2101 17333380 17331416 0.000000e+00 2992.0
7 TraesCS7D01G002200 chr7B 96.364 330 8 3 2146 2471 17331424 17331095 9.820000e-150 540.0
8 TraesCS7D01G002200 chr7B 85.028 354 35 12 2087 2424 176642662 176643013 8.270000e-91 344.0
9 TraesCS7D01G002200 chr7B 96.835 158 5 0 2956 3113 17331098 17330941 6.620000e-67 265.0
10 TraesCS7D01G002200 chr7B 94.643 112 5 1 5 115 17342454 17342343 4.130000e-39 172.0
11 TraesCS7D01G002200 chr7B 89.062 64 7 0 614 677 527678465 527678528 2.570000e-11 80.5
12 TraesCS7D01G002200 chr7A 90.712 969 73 12 784 1741 1128175 1129137 0.000000e+00 1275.0
13 TraesCS7D01G002200 chr7A 87.084 511 45 15 103 608 1127524 1128018 2.710000e-155 558.0
14 TraesCS7D01G002200 chr1D 98.316 475 7 1 2476 2950 37432920 37432447 0.000000e+00 832.0
15 TraesCS7D01G002200 chr2D 95.122 492 22 1 2465 2956 462487114 462486625 0.000000e+00 774.0
16 TraesCS7D01G002200 chr2D 95.560 473 19 1 2478 2950 204265320 204265790 0.000000e+00 756.0
17 TraesCS7D01G002200 chr2D 94.351 478 25 2 2473 2950 633327373 633327848 0.000000e+00 732.0
18 TraesCS7D01G002200 chr5D 95.188 478 21 1 2473 2950 486229019 486229494 0.000000e+00 754.0
19 TraesCS7D01G002200 chr4D 94.958 476 22 1 2477 2952 464309681 464310154 0.000000e+00 745.0
20 TraesCS7D01G002200 chr3D 94.770 478 23 1 2473 2950 559476405 559476880 0.000000e+00 743.0
21 TraesCS7D01G002200 chr3D 94.421 484 24 2 2469 2952 93612032 93611552 0.000000e+00 741.0
22 TraesCS7D01G002200 chr5B 82.240 366 51 7 2072 2424 333562017 333562381 1.400000e-78 303.0
23 TraesCS7D01G002200 chr5B 86.466 133 18 0 2959 3091 333562429 333562561 2.500000e-31 147.0
24 TraesCS7D01G002200 chr5A 81.408 355 56 7 2077 2426 385540825 385541174 6.570000e-72 281.0
25 TraesCS7D01G002200 chr1B 82.895 152 26 0 2957 3108 462977258 462977409 1.510000e-28 137.0
26 TraesCS7D01G002200 chr4B 97.959 49 1 0 2962 3010 660708919 660708871 5.530000e-13 86.1
27 TraesCS7D01G002200 chr2A 93.103 58 4 0 619 676 472764105 472764162 5.530000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G002200 chr7D 1525958 1529070 3112 True 5749.000000 5749 100.000000 1 3113 1 chr7D.!!$R1 3112
1 TraesCS7D01G002200 chr7B 17330941 17333380 2439 True 1265.666667 2992 95.754667 112 3113 3 chr7B.!!$R2 3001
2 TraesCS7D01G002200 chr7A 1127524 1129137 1613 False 916.500000 1275 88.898000 103 1741 2 chr7A.!!$F1 1638
3 TraesCS7D01G002200 chr5B 333562017 333562561 544 False 225.000000 303 84.353000 2072 3091 2 chr5B.!!$F1 1019

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
633 711 0.30776 GCGTTGAGGTGGACACTTTG 59.692 55.0 2.13 0.0 0.0 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2143 2235 0.179097 GAGAGTTGGGCCTTCTAGCG 60.179 60.0 4.53 0.0 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.002038 AGTTGTACTCCCTCCGTCTAG 57.998 52.381 0.00 0.00 0.00 2.43
22 23 2.022934 GTTGTACTCCCTCCGTCTAGG 58.977 57.143 0.00 0.00 42.97 3.02
23 24 1.293062 TGTACTCCCTCCGTCTAGGT 58.707 55.000 0.00 0.00 41.99 3.08
24 25 1.064906 TGTACTCCCTCCGTCTAGGTG 60.065 57.143 0.00 0.00 41.99 4.00
25 26 1.064832 GTACTCCCTCCGTCTAGGTGT 60.065 57.143 0.00 0.00 41.99 4.16
26 27 1.293062 ACTCCCTCCGTCTAGGTGTA 58.707 55.000 0.00 0.00 41.99 2.90
27 28 1.212441 ACTCCCTCCGTCTAGGTGTAG 59.788 57.143 0.00 0.00 41.99 2.74
28 29 1.212441 CTCCCTCCGTCTAGGTGTAGT 59.788 57.143 0.00 0.00 41.99 2.73
29 30 1.637553 TCCCTCCGTCTAGGTGTAGTT 59.362 52.381 0.00 0.00 41.99 2.24
30 31 1.749634 CCCTCCGTCTAGGTGTAGTTG 59.250 57.143 0.00 0.00 41.99 3.16
31 32 2.444421 CCTCCGTCTAGGTGTAGTTGT 58.556 52.381 0.00 0.00 41.99 3.32
32 33 3.614092 CCTCCGTCTAGGTGTAGTTGTA 58.386 50.000 0.00 0.00 41.99 2.41
33 34 3.626670 CCTCCGTCTAGGTGTAGTTGTAG 59.373 52.174 0.00 0.00 41.99 2.74
34 35 3.012518 TCCGTCTAGGTGTAGTTGTAGC 58.987 50.000 0.00 0.00 41.99 3.58
35 36 2.751259 CCGTCTAGGTGTAGTTGTAGCA 59.249 50.000 0.00 0.00 34.51 3.49
36 37 3.181499 CCGTCTAGGTGTAGTTGTAGCAG 60.181 52.174 0.00 0.00 34.51 4.24
37 38 3.731264 CGTCTAGGTGTAGTTGTAGCAGC 60.731 52.174 0.00 0.00 0.00 5.25
38 39 3.192844 GTCTAGGTGTAGTTGTAGCAGCA 59.807 47.826 0.00 0.00 33.59 4.41
39 40 3.830178 TCTAGGTGTAGTTGTAGCAGCAA 59.170 43.478 0.00 0.00 33.59 3.91
40 41 3.485463 AGGTGTAGTTGTAGCAGCAAA 57.515 42.857 0.00 0.00 33.59 3.68
41 42 4.021102 AGGTGTAGTTGTAGCAGCAAAT 57.979 40.909 0.00 0.00 33.59 2.32
42 43 4.003648 AGGTGTAGTTGTAGCAGCAAATC 58.996 43.478 0.00 0.00 33.59 2.17
43 44 3.127030 GGTGTAGTTGTAGCAGCAAATCC 59.873 47.826 0.00 0.00 0.00 3.01
44 45 3.751175 GTGTAGTTGTAGCAGCAAATCCA 59.249 43.478 0.00 0.00 0.00 3.41
45 46 4.002982 TGTAGTTGTAGCAGCAAATCCAG 58.997 43.478 0.00 0.00 0.00 3.86
46 47 3.423539 AGTTGTAGCAGCAAATCCAGA 57.576 42.857 0.00 0.00 0.00 3.86
47 48 3.754965 AGTTGTAGCAGCAAATCCAGAA 58.245 40.909 0.00 0.00 0.00 3.02
48 49 3.503748 AGTTGTAGCAGCAAATCCAGAAC 59.496 43.478 0.00 0.00 0.00 3.01
49 50 2.076100 TGTAGCAGCAAATCCAGAACG 58.924 47.619 0.00 0.00 0.00 3.95
50 51 1.398390 GTAGCAGCAAATCCAGAACGG 59.602 52.381 0.00 0.00 0.00 4.44
59 60 2.829094 TCCAGAACGGACACCAAGA 58.171 52.632 0.00 0.00 39.64 3.02
60 61 0.679505 TCCAGAACGGACACCAAGAG 59.320 55.000 0.00 0.00 39.64 2.85
61 62 0.393077 CCAGAACGGACACCAAGAGT 59.607 55.000 0.00 0.00 36.56 3.24
62 63 1.202651 CCAGAACGGACACCAAGAGTT 60.203 52.381 0.00 0.00 36.56 3.01
63 64 2.561569 CAGAACGGACACCAAGAGTTT 58.438 47.619 0.00 0.00 0.00 2.66
64 65 2.544267 CAGAACGGACACCAAGAGTTTC 59.456 50.000 0.00 0.00 0.00 2.78
65 66 1.525619 GAACGGACACCAAGAGTTTCG 59.474 52.381 0.00 0.00 0.00 3.46
66 67 0.748450 ACGGACACCAAGAGTTTCGA 59.252 50.000 0.00 0.00 0.00 3.71
67 68 1.269621 ACGGACACCAAGAGTTTCGAG 60.270 52.381 0.00 0.00 0.00 4.04
68 69 1.149148 GGACACCAAGAGTTTCGAGC 58.851 55.000 0.00 0.00 0.00 5.03
69 70 1.149148 GACACCAAGAGTTTCGAGCC 58.851 55.000 0.00 0.00 0.00 4.70
70 71 0.759346 ACACCAAGAGTTTCGAGCCT 59.241 50.000 0.00 0.00 0.00 4.58
71 72 1.270358 ACACCAAGAGTTTCGAGCCTC 60.270 52.381 5.52 5.52 0.00 4.70
72 73 0.321996 ACCAAGAGTTTCGAGCCTCC 59.678 55.000 9.14 0.00 0.00 4.30
73 74 0.391793 CCAAGAGTTTCGAGCCTCCC 60.392 60.000 9.14 0.00 0.00 4.30
74 75 0.391793 CAAGAGTTTCGAGCCTCCCC 60.392 60.000 9.14 0.00 0.00 4.81
75 76 1.889530 AAGAGTTTCGAGCCTCCCCG 61.890 60.000 9.14 0.00 0.00 5.73
76 77 3.372554 GAGTTTCGAGCCTCCCCGG 62.373 68.421 0.00 0.00 0.00 5.73
85 86 2.271173 CCTCCCCGGCCACTTTAC 59.729 66.667 2.24 0.00 0.00 2.01
86 87 2.298661 CCTCCCCGGCCACTTTACT 61.299 63.158 2.24 0.00 0.00 2.24
87 88 1.078426 CTCCCCGGCCACTTTACTG 60.078 63.158 2.24 0.00 0.00 2.74
88 89 1.838073 CTCCCCGGCCACTTTACTGT 61.838 60.000 2.24 0.00 0.00 3.55
89 90 1.074248 CCCCGGCCACTTTACTGTT 59.926 57.895 2.24 0.00 0.00 3.16
90 91 0.538746 CCCCGGCCACTTTACTGTTT 60.539 55.000 2.24 0.00 0.00 2.83
91 92 1.324383 CCCGGCCACTTTACTGTTTT 58.676 50.000 2.24 0.00 0.00 2.43
92 93 1.684450 CCCGGCCACTTTACTGTTTTT 59.316 47.619 2.24 0.00 0.00 1.94
93 94 2.287970 CCCGGCCACTTTACTGTTTTTC 60.288 50.000 2.24 0.00 0.00 2.29
94 95 2.287970 CCGGCCACTTTACTGTTTTTCC 60.288 50.000 2.24 0.00 0.00 3.13
95 96 2.287970 CGGCCACTTTACTGTTTTTCCC 60.288 50.000 2.24 0.00 0.00 3.97
96 97 2.963101 GGCCACTTTACTGTTTTTCCCT 59.037 45.455 0.00 0.00 0.00 4.20
97 98 3.005472 GGCCACTTTACTGTTTTTCCCTC 59.995 47.826 0.00 0.00 0.00 4.30
98 99 3.889538 GCCACTTTACTGTTTTTCCCTCT 59.110 43.478 0.00 0.00 0.00 3.69
99 100 5.067954 GCCACTTTACTGTTTTTCCCTCTA 58.932 41.667 0.00 0.00 0.00 2.43
100 101 5.710567 GCCACTTTACTGTTTTTCCCTCTAT 59.289 40.000 0.00 0.00 0.00 1.98
101 102 6.127980 GCCACTTTACTGTTTTTCCCTCTATC 60.128 42.308 0.00 0.00 0.00 2.08
225 228 9.108284 CACCACTCCTATTTTTGTTTGATTTTT 57.892 29.630 0.00 0.00 0.00 1.94
359 364 3.808728 TGCCCAGAATATGTAGAGTTGC 58.191 45.455 0.00 0.00 0.00 4.17
417 422 4.222124 ACCTTTGAGACATATCACACCC 57.778 45.455 0.00 0.00 0.00 4.61
472 477 5.220303 GCACATGAGAAAATACACTCGACTC 60.220 44.000 0.00 0.00 36.11 3.36
523 528 1.807165 CGTGGATGCCGAGTGTGAG 60.807 63.158 0.00 0.00 0.00 3.51
545 550 1.711060 TTGGTTTATAGGCAGCGCGC 61.711 55.000 26.66 26.66 41.28 6.86
620 698 1.795872 CTCGTTTATGTGTGGCGTTGA 59.204 47.619 0.00 0.00 0.00 3.18
621 699 1.795872 TCGTTTATGTGTGGCGTTGAG 59.204 47.619 0.00 0.00 0.00 3.02
622 700 1.136085 CGTTTATGTGTGGCGTTGAGG 60.136 52.381 0.00 0.00 0.00 3.86
623 701 1.877443 GTTTATGTGTGGCGTTGAGGT 59.123 47.619 0.00 0.00 0.00 3.85
624 702 1.518325 TTATGTGTGGCGTTGAGGTG 58.482 50.000 0.00 0.00 0.00 4.00
625 703 0.321210 TATGTGTGGCGTTGAGGTGG 60.321 55.000 0.00 0.00 0.00 4.61
626 704 2.050836 ATGTGTGGCGTTGAGGTGGA 62.051 55.000 0.00 0.00 0.00 4.02
627 705 2.110213 TGTGGCGTTGAGGTGGAC 59.890 61.111 0.00 0.00 0.00 4.02
628 706 2.110213 GTGGCGTTGAGGTGGACA 59.890 61.111 0.00 0.00 0.00 4.02
629 707 2.110213 TGGCGTTGAGGTGGACAC 59.890 61.111 0.00 0.00 0.00 3.67
630 708 2.426023 GGCGTTGAGGTGGACACT 59.574 61.111 2.13 0.00 0.00 3.55
631 709 1.227853 GGCGTTGAGGTGGACACTT 60.228 57.895 2.13 0.00 0.00 3.16
632 710 0.818040 GGCGTTGAGGTGGACACTTT 60.818 55.000 2.13 0.00 0.00 2.66
633 711 0.307760 GCGTTGAGGTGGACACTTTG 59.692 55.000 2.13 0.00 0.00 2.77
634 712 0.307760 CGTTGAGGTGGACACTTTGC 59.692 55.000 2.13 0.00 0.00 3.68
635 713 1.388547 GTTGAGGTGGACACTTTGCA 58.611 50.000 2.13 0.00 0.00 4.08
636 714 1.956477 GTTGAGGTGGACACTTTGCAT 59.044 47.619 2.13 0.00 0.00 3.96
637 715 1.608055 TGAGGTGGACACTTTGCATG 58.392 50.000 2.13 0.00 0.00 4.06
638 716 1.133823 TGAGGTGGACACTTTGCATGT 60.134 47.619 2.13 0.00 0.00 3.21
639 717 1.956477 GAGGTGGACACTTTGCATGTT 59.044 47.619 2.13 0.00 0.00 2.71
640 718 1.682854 AGGTGGACACTTTGCATGTTG 59.317 47.619 2.13 0.00 0.00 3.33
644 722 1.000274 GGACACTTTGCATGTTGGGTC 60.000 52.381 0.00 0.00 0.00 4.46
745 823 4.347607 AGCTTGGCATCCAGAAGTTATTT 58.652 39.130 0.00 0.00 33.81 1.40
746 824 4.400567 AGCTTGGCATCCAGAAGTTATTTC 59.599 41.667 0.00 0.00 33.81 2.17
748 826 5.643379 TTGGCATCCAGAAGTTATTTCAC 57.357 39.130 0.00 0.00 38.31 3.18
749 827 3.689161 TGGCATCCAGAAGTTATTTCACG 59.311 43.478 0.00 0.00 38.31 4.35
805 884 8.238481 ACATTTTCAAACGGTAGCAAAATATG 57.762 30.769 0.00 0.00 0.00 1.78
846 925 2.484264 CTGGGTCGCTTACTGGAAAAAG 59.516 50.000 0.00 0.00 0.00 2.27
921 1009 4.215399 CAGATCCCTCGTCACTCTCTTATC 59.785 50.000 0.00 0.00 0.00 1.75
953 1041 1.489230 CCCCCTTAACTAAGCACCGAT 59.511 52.381 0.00 0.00 32.02 4.18
954 1042 2.561569 CCCCTTAACTAAGCACCGATG 58.438 52.381 0.00 0.00 32.02 3.84
955 1043 2.561569 CCCTTAACTAAGCACCGATGG 58.438 52.381 0.00 0.00 32.02 3.51
956 1044 2.169769 CCCTTAACTAAGCACCGATGGA 59.830 50.000 0.00 0.00 32.02 3.41
957 1045 3.370103 CCCTTAACTAAGCACCGATGGAA 60.370 47.826 0.00 0.00 32.02 3.53
962 1050 0.390603 TAAGCACCGATGGAACCGTG 60.391 55.000 0.00 0.00 0.00 4.94
1548 1638 1.068127 ACGACGCTCACCTACAAGTTT 59.932 47.619 0.00 0.00 0.00 2.66
1723 1813 7.009631 CGATGTATCCTATTTAGCCATTTCTCG 59.990 40.741 0.00 0.00 0.00 4.04
1864 1954 2.672961 TAGTGCTGGCTGTGTGTATC 57.327 50.000 0.00 0.00 0.00 2.24
1905 1995 9.547753 GTCAGGTGTTGTTCTCATTATATATGT 57.452 33.333 0.00 0.00 0.00 2.29
1960 2051 6.782150 AGAAAATAAAAGACGCCCTTTATCG 58.218 36.000 4.17 0.00 43.90 2.92
1992 2083 0.748450 TAACCATTCTCCGGCCTACG 59.252 55.000 0.00 0.00 43.80 3.51
2046 2137 4.722535 AGGGGCCTCCGAGCTGAA 62.723 66.667 0.00 0.00 41.52 3.02
2071 2162 7.915508 ACCATTGTATATATGTTTCACGTGTG 58.084 34.615 16.51 0.00 0.00 3.82
2105 2196 1.288188 TCATCATCTGAAGGCACCCA 58.712 50.000 0.00 0.00 0.00 4.51
2113 2204 0.036732 TGAAGGCACCCAGTCATGAC 59.963 55.000 18.47 18.47 0.00 3.06
2115 2206 0.478072 AAGGCACCCAGTCATGACAA 59.522 50.000 27.02 0.00 0.00 3.18
2116 2207 0.700564 AGGCACCCAGTCATGACAAT 59.299 50.000 27.02 5.13 0.00 2.71
2120 2211 2.095059 GCACCCAGTCATGACAATGAAC 60.095 50.000 27.02 9.09 44.40 3.18
2141 2233 4.410099 ACAATTTCTTCTTCATGGGAGCA 58.590 39.130 0.00 0.00 0.00 4.26
2143 2235 2.496899 TTCTTCTTCATGGGAGCACC 57.503 50.000 0.00 0.00 40.81 5.01
2182 2276 1.807142 CGCCCTTCTTCTTCTTTGGAC 59.193 52.381 0.00 0.00 0.00 4.02
2195 2289 2.094757 TTTGGACGAGAAGGCGCAGA 62.095 55.000 10.83 0.00 33.86 4.26
2207 2301 1.495878 GGCGCAGACTCACTATCATG 58.504 55.000 10.83 0.00 0.00 3.07
2419 2523 6.839820 TCATCATCTTCACTTTCATCATCG 57.160 37.500 0.00 0.00 0.00 3.84
2426 2530 7.761651 TCTTCACTTTCATCATCGTCTTATG 57.238 36.000 0.00 0.00 0.00 1.90
2427 2531 6.758416 TCTTCACTTTCATCATCGTCTTATGG 59.242 38.462 0.00 0.00 0.00 2.74
2477 2585 9.449719 TCTCTAGACATTAATCATATACAGCGA 57.550 33.333 0.00 0.00 0.00 4.93
2501 2609 0.859232 AATAGCACGCTATTTCGCCG 59.141 50.000 16.70 0.00 44.18 6.46
2502 2610 0.249322 ATAGCACGCTATTTCGCCGT 60.249 50.000 5.72 0.00 35.92 5.68
2503 2611 0.458889 TAGCACGCTATTTCGCCGTT 60.459 50.000 0.00 0.00 32.18 4.44
2504 2612 0.458889 AGCACGCTATTTCGCCGTTA 60.459 50.000 0.00 0.00 32.18 3.18
2505 2613 0.580104 GCACGCTATTTCGCCGTTAT 59.420 50.000 0.00 0.00 32.18 1.89
2506 2614 1.788308 GCACGCTATTTCGCCGTTATA 59.212 47.619 0.00 0.00 32.18 0.98
2507 2615 2.219216 GCACGCTATTTCGCCGTTATAA 59.781 45.455 0.00 0.00 32.18 0.98
2508 2616 3.780054 CACGCTATTTCGCCGTTATAAC 58.220 45.455 5.47 5.47 32.18 1.89
2526 2634 8.196884 CGTTATAACGCGGTTATATCATATTCG 58.803 37.037 23.72 2.48 46.06 3.34
2527 2635 8.474577 GTTATAACGCGGTTATATCATATTCGG 58.525 37.037 12.47 0.00 39.64 4.30
2528 2636 4.707030 ACGCGGTTATATCATATTCGGA 57.293 40.909 12.47 0.00 0.00 4.55
2529 2637 5.063180 ACGCGGTTATATCATATTCGGAA 57.937 39.130 12.47 0.00 0.00 4.30
2530 2638 5.100259 ACGCGGTTATATCATATTCGGAAG 58.900 41.667 12.47 0.00 0.00 3.46
2531 2639 4.503007 CGCGGTTATATCATATTCGGAAGG 59.497 45.833 0.00 0.00 0.00 3.46
2532 2640 4.809426 GCGGTTATATCATATTCGGAAGGG 59.191 45.833 0.00 0.00 0.00 3.95
2533 2641 5.394883 GCGGTTATATCATATTCGGAAGGGA 60.395 44.000 0.00 0.00 0.00 4.20
2534 2642 6.273825 CGGTTATATCATATTCGGAAGGGAG 58.726 44.000 0.00 0.00 0.00 4.30
2535 2643 6.096423 CGGTTATATCATATTCGGAAGGGAGA 59.904 42.308 0.00 0.00 0.00 3.71
2536 2644 7.266400 GGTTATATCATATTCGGAAGGGAGAC 58.734 42.308 0.00 0.00 0.00 3.36
2537 2645 3.944055 ATCATATTCGGAAGGGAGACG 57.056 47.619 0.00 0.00 0.00 4.18
2538 2646 2.662866 TCATATTCGGAAGGGAGACGT 58.337 47.619 0.00 0.00 0.00 4.34
2539 2647 3.028850 TCATATTCGGAAGGGAGACGTT 58.971 45.455 0.00 0.00 42.01 3.99
2540 2648 4.209538 TCATATTCGGAAGGGAGACGTTA 58.790 43.478 0.00 0.00 38.82 3.18
2541 2649 2.955477 ATTCGGAAGGGAGACGTTAC 57.045 50.000 0.00 0.00 38.82 2.50
2545 2653 2.445565 GGAAGGGAGACGTTACGTTT 57.554 50.000 12.82 6.17 41.37 3.60
2546 2654 2.759191 GGAAGGGAGACGTTACGTTTT 58.241 47.619 12.82 3.52 41.37 2.43
2547 2655 2.477754 GGAAGGGAGACGTTACGTTTTG 59.522 50.000 12.82 0.00 41.37 2.44
2548 2656 2.159327 AGGGAGACGTTACGTTTTGG 57.841 50.000 12.82 0.00 41.37 3.28
2549 2657 0.514255 GGGAGACGTTACGTTTTGGC 59.486 55.000 12.82 0.00 41.37 4.52
2550 2658 1.219646 GGAGACGTTACGTTTTGGCA 58.780 50.000 12.82 0.00 41.37 4.92
2551 2659 1.598601 GGAGACGTTACGTTTTGGCAA 59.401 47.619 12.82 0.00 41.37 4.52
2552 2660 2.031930 GGAGACGTTACGTTTTGGCAAA 59.968 45.455 12.82 8.93 41.37 3.68
2553 2661 3.487209 GGAGACGTTACGTTTTGGCAAAA 60.487 43.478 20.81 20.81 41.37 2.44
2554 2662 4.284485 GAGACGTTACGTTTTGGCAAAAT 58.716 39.130 26.41 15.14 41.37 1.82
2555 2663 4.284485 AGACGTTACGTTTTGGCAAAATC 58.716 39.130 26.41 17.74 41.37 2.17
2556 2664 3.037324 ACGTTACGTTTTGGCAAAATCG 58.963 40.909 28.83 28.83 41.87 3.34
2557 2665 2.402378 CGTTACGTTTTGGCAAAATCGG 59.598 45.455 31.17 24.07 40.93 4.18
2558 2666 2.053282 TACGTTTTGGCAAAATCGGC 57.947 45.000 31.17 19.63 40.93 5.54
2564 2672 2.407616 GGCAAAATCGGCCGCTAC 59.592 61.111 23.51 6.05 42.39 3.58
2565 2673 2.022762 GCAAAATCGGCCGCTACG 59.977 61.111 23.51 8.73 0.00 3.51
2577 2685 3.221956 GCTACGGCGCTAATCACG 58.778 61.111 6.90 3.16 0.00 4.35
2578 2686 1.588139 GCTACGGCGCTAATCACGT 60.588 57.895 6.90 10.07 42.71 4.49
2579 2687 0.317269 GCTACGGCGCTAATCACGTA 60.317 55.000 6.90 10.75 40.38 3.57
2580 2688 1.861202 GCTACGGCGCTAATCACGTAA 60.861 52.381 6.90 0.00 40.69 3.18
2581 2689 2.658285 CTACGGCGCTAATCACGTAAT 58.342 47.619 6.90 0.00 40.69 1.89
2582 2690 1.930567 ACGGCGCTAATCACGTAATT 58.069 45.000 6.90 0.00 37.85 1.40
2583 2691 3.082698 ACGGCGCTAATCACGTAATTA 57.917 42.857 6.90 0.00 37.85 1.40
2584 2692 3.047796 ACGGCGCTAATCACGTAATTAG 58.952 45.455 13.31 13.31 40.63 1.73
2589 2697 3.073022 CTAATCACGTAATTAGCGCGC 57.927 47.619 26.66 26.66 33.68 6.86
2590 2698 1.567504 AATCACGTAATTAGCGCGCT 58.432 45.000 38.01 38.01 0.00 5.92
2591 2699 2.410785 ATCACGTAATTAGCGCGCTA 57.589 45.000 35.48 35.48 0.00 4.26
2592 2700 1.469917 TCACGTAATTAGCGCGCTAC 58.530 50.000 38.48 28.33 0.00 3.58
2593 2701 1.193644 CACGTAATTAGCGCGCTACA 58.806 50.000 38.48 27.91 0.00 2.74
2594 2702 1.072348 CACGTAATTAGCGCGCTACAC 60.072 52.381 38.48 30.75 0.00 2.90
2595 2703 1.193644 CGTAATTAGCGCGCTACACA 58.806 50.000 38.48 25.57 0.00 3.72
2596 2704 1.072348 CGTAATTAGCGCGCTACACAC 60.072 52.381 38.48 30.12 0.00 3.82
2597 2705 1.072348 GTAATTAGCGCGCTACACACG 60.072 52.381 38.48 0.00 0.00 4.49
2607 2715 2.179589 CGCTACACACGCTATAACGTT 58.820 47.619 5.88 5.88 45.75 3.99
2608 2716 2.036004 CGCTACACACGCTATAACGTTG 60.036 50.000 11.99 4.29 45.75 4.10
2609 2717 2.919229 GCTACACACGCTATAACGTTGT 59.081 45.455 11.99 6.97 45.75 3.32
2610 2718 4.097714 GCTACACACGCTATAACGTTGTA 58.902 43.478 11.99 7.93 45.75 2.41
2611 2719 4.203764 GCTACACACGCTATAACGTTGTAG 59.796 45.833 25.98 25.98 45.75 2.74
2612 2720 2.919229 ACACACGCTATAACGTTGTAGC 59.081 45.455 34.30 34.30 45.75 3.58
2626 2734 6.683090 ACGTTGTAGCGTTATACGTTTTAA 57.317 33.333 13.79 0.00 44.73 1.52
2627 2735 6.513317 ACGTTGTAGCGTTATACGTTTTAAC 58.487 36.000 13.79 2.00 44.73 2.01
2636 2744 4.526152 CGTTTTAACGTGCAGGCC 57.474 55.556 6.26 0.00 46.63 5.19
2637 2745 1.649815 CGTTTTAACGTGCAGGCCA 59.350 52.632 5.01 0.00 46.63 5.36
2638 2746 0.239879 CGTTTTAACGTGCAGGCCAT 59.760 50.000 5.01 0.00 46.63 4.40
2639 2747 1.696988 GTTTTAACGTGCAGGCCATG 58.303 50.000 5.01 0.97 36.50 3.66
2650 2758 2.529780 CAGGCCATGCAAAACTGAAA 57.470 45.000 5.01 0.00 0.00 2.69
2651 2759 2.137523 CAGGCCATGCAAAACTGAAAC 58.862 47.619 5.01 0.00 0.00 2.78
2652 2760 1.761784 AGGCCATGCAAAACTGAAACA 59.238 42.857 5.01 0.00 0.00 2.83
2653 2761 2.170187 AGGCCATGCAAAACTGAAACAA 59.830 40.909 5.01 0.00 0.00 2.83
2654 2762 2.287644 GGCCATGCAAAACTGAAACAAC 59.712 45.455 0.00 0.00 0.00 3.32
2655 2763 2.287644 GCCATGCAAAACTGAAACAACC 59.712 45.455 0.00 0.00 0.00 3.77
2656 2764 3.529533 CCATGCAAAACTGAAACAACCA 58.470 40.909 0.00 0.00 0.00 3.67
2657 2765 3.309410 CCATGCAAAACTGAAACAACCAC 59.691 43.478 0.00 0.00 0.00 4.16
2658 2766 3.667497 TGCAAAACTGAAACAACCACA 57.333 38.095 0.00 0.00 0.00 4.17
2659 2767 3.583806 TGCAAAACTGAAACAACCACAG 58.416 40.909 0.00 0.00 37.62 3.66
2660 2768 2.348362 GCAAAACTGAAACAACCACAGC 59.652 45.455 0.00 0.00 35.38 4.40
2661 2769 2.929398 CAAAACTGAAACAACCACAGCC 59.071 45.455 0.00 0.00 35.38 4.85
2662 2770 1.111277 AACTGAAACAACCACAGCCC 58.889 50.000 0.00 0.00 35.38 5.19
2663 2771 0.033601 ACTGAAACAACCACAGCCCA 60.034 50.000 0.00 0.00 35.38 5.36
2664 2772 0.670162 CTGAAACAACCACAGCCCAG 59.330 55.000 0.00 0.00 0.00 4.45
2665 2773 1.363807 GAAACAACCACAGCCCAGC 59.636 57.895 0.00 0.00 0.00 4.85
2666 2774 2.087462 GAAACAACCACAGCCCAGCC 62.087 60.000 0.00 0.00 0.00 4.85
2667 2775 4.954970 ACAACCACAGCCCAGCCG 62.955 66.667 0.00 0.00 0.00 5.52
2686 2794 2.523902 CCCAGCAGGCCAAAACCA 60.524 61.111 5.01 0.00 0.00 3.67
2687 2795 2.139484 CCCAGCAGGCCAAAACCAA 61.139 57.895 5.01 0.00 0.00 3.67
2688 2796 1.069596 CCAGCAGGCCAAAACCAAC 59.930 57.895 5.01 0.00 0.00 3.77
2689 2797 1.069596 CAGCAGGCCAAAACCAACC 59.930 57.895 5.01 0.00 0.00 3.77
2690 2798 2.140138 AGCAGGCCAAAACCAACCC 61.140 57.895 5.01 0.00 0.00 4.11
2691 2799 2.439104 GCAGGCCAAAACCAACCCA 61.439 57.895 5.01 0.00 0.00 4.51
2692 2800 1.445518 CAGGCCAAAACCAACCCAC 59.554 57.895 5.01 0.00 0.00 4.61
2693 2801 2.131067 AGGCCAAAACCAACCCACG 61.131 57.895 5.01 0.00 0.00 4.94
2694 2802 2.128507 GGCCAAAACCAACCCACGA 61.129 57.895 0.00 0.00 0.00 4.35
2695 2803 1.066752 GCCAAAACCAACCCACGAC 59.933 57.895 0.00 0.00 0.00 4.34
2696 2804 1.737201 CCAAAACCAACCCACGACC 59.263 57.895 0.00 0.00 0.00 4.79
2697 2805 1.038130 CCAAAACCAACCCACGACCA 61.038 55.000 0.00 0.00 0.00 4.02
2698 2806 0.101579 CAAAACCAACCCACGACCAC 59.898 55.000 0.00 0.00 0.00 4.16
2699 2807 0.033894 AAAACCAACCCACGACCACT 60.034 50.000 0.00 0.00 0.00 4.00
2700 2808 0.838608 AAACCAACCCACGACCACTA 59.161 50.000 0.00 0.00 0.00 2.74
2701 2809 0.107268 AACCAACCCACGACCACTAC 59.893 55.000 0.00 0.00 0.00 2.73
2702 2810 1.004200 CCAACCCACGACCACTACC 60.004 63.158 0.00 0.00 0.00 3.18
2703 2811 1.477685 CCAACCCACGACCACTACCT 61.478 60.000 0.00 0.00 0.00 3.08
2704 2812 0.395312 CAACCCACGACCACTACCTT 59.605 55.000 0.00 0.00 0.00 3.50
2705 2813 1.134228 AACCCACGACCACTACCTTT 58.866 50.000 0.00 0.00 0.00 3.11
2706 2814 0.683412 ACCCACGACCACTACCTTTC 59.317 55.000 0.00 0.00 0.00 2.62
2707 2815 0.974383 CCCACGACCACTACCTTTCT 59.026 55.000 0.00 0.00 0.00 2.52
2708 2816 1.067071 CCCACGACCACTACCTTTCTC 60.067 57.143 0.00 0.00 0.00 2.87
2709 2817 1.616865 CCACGACCACTACCTTTCTCA 59.383 52.381 0.00 0.00 0.00 3.27
2710 2818 2.609737 CCACGACCACTACCTTTCTCAC 60.610 54.545 0.00 0.00 0.00 3.51
2711 2819 2.296471 CACGACCACTACCTTTCTCACT 59.704 50.000 0.00 0.00 0.00 3.41
2712 2820 2.557490 ACGACCACTACCTTTCTCACTC 59.443 50.000 0.00 0.00 0.00 3.51
2713 2821 2.820787 CGACCACTACCTTTCTCACTCT 59.179 50.000 0.00 0.00 0.00 3.24
2714 2822 3.256136 CGACCACTACCTTTCTCACTCTT 59.744 47.826 0.00 0.00 0.00 2.85
2715 2823 4.262079 CGACCACTACCTTTCTCACTCTTT 60.262 45.833 0.00 0.00 0.00 2.52
2716 2824 5.612351 GACCACTACCTTTCTCACTCTTTT 58.388 41.667 0.00 0.00 0.00 2.27
2717 2825 6.002653 ACCACTACCTTTCTCACTCTTTTT 57.997 37.500 0.00 0.00 0.00 1.94
2718 2826 7.133133 ACCACTACCTTTCTCACTCTTTTTA 57.867 36.000 0.00 0.00 0.00 1.52
2719 2827 7.746703 ACCACTACCTTTCTCACTCTTTTTAT 58.253 34.615 0.00 0.00 0.00 1.40
2720 2828 7.878644 ACCACTACCTTTCTCACTCTTTTTATC 59.121 37.037 0.00 0.00 0.00 1.75
2721 2829 8.097662 CCACTACCTTTCTCACTCTTTTTATCT 58.902 37.037 0.00 0.00 0.00 1.98
2722 2830 9.495572 CACTACCTTTCTCACTCTTTTTATCTT 57.504 33.333 0.00 0.00 0.00 2.40
2723 2831 9.495572 ACTACCTTTCTCACTCTTTTTATCTTG 57.504 33.333 0.00 0.00 0.00 3.02
2724 2832 9.712305 CTACCTTTCTCACTCTTTTTATCTTGA 57.288 33.333 0.00 0.00 0.00 3.02
2725 2833 8.980481 ACCTTTCTCACTCTTTTTATCTTGAA 57.020 30.769 0.00 0.00 0.00 2.69
2726 2834 9.408648 ACCTTTCTCACTCTTTTTATCTTGAAA 57.591 29.630 0.00 0.00 0.00 2.69
2727 2835 9.670719 CCTTTCTCACTCTTTTTATCTTGAAAC 57.329 33.333 0.00 0.00 0.00 2.78
2730 2838 8.964476 TCTCACTCTTTTTATCTTGAAACTGT 57.036 30.769 0.00 0.00 0.00 3.55
2731 2839 9.396022 TCTCACTCTTTTTATCTTGAAACTGTT 57.604 29.630 0.00 0.00 0.00 3.16
2733 2841 9.787532 TCACTCTTTTTATCTTGAAACTGTTTG 57.212 29.630 11.03 0.00 0.00 2.93
2734 2842 9.787532 CACTCTTTTTATCTTGAAACTGTTTGA 57.212 29.630 11.03 0.00 0.00 2.69
2742 2850 9.607988 TTATCTTGAAACTGTTTGAGACTTACA 57.392 29.630 11.03 0.00 0.00 2.41
2743 2851 7.915293 TCTTGAAACTGTTTGAGACTTACAA 57.085 32.000 11.03 5.24 0.00 2.41
2744 2852 8.506168 TCTTGAAACTGTTTGAGACTTACAAT 57.494 30.769 11.03 0.00 0.00 2.71
2745 2853 8.956426 TCTTGAAACTGTTTGAGACTTACAATT 58.044 29.630 11.03 0.00 0.00 2.32
2746 2854 9.573133 CTTGAAACTGTTTGAGACTTACAATTT 57.427 29.630 11.03 0.00 0.00 1.82
2747 2855 9.921637 TTGAAACTGTTTGAGACTTACAATTTT 57.078 25.926 11.03 0.00 0.00 1.82
2748 2856 9.921637 TGAAACTGTTTGAGACTTACAATTTTT 57.078 25.926 11.03 0.00 0.00 1.94
2754 2862 9.959749 TGTTTGAGACTTACAATTTTTATGTCC 57.040 29.630 5.46 0.75 32.27 4.02
2765 2873 7.555965 ACAATTTTTATGTCCTAGATTTGGCC 58.444 34.615 0.00 0.00 0.00 5.36
2766 2874 6.731292 ATTTTTATGTCCTAGATTTGGCCC 57.269 37.500 0.00 0.00 0.00 5.80
2767 2875 5.466127 TTTTATGTCCTAGATTTGGCCCT 57.534 39.130 0.00 0.00 0.00 5.19
2768 2876 5.466127 TTTATGTCCTAGATTTGGCCCTT 57.534 39.130 0.00 0.00 0.00 3.95
2769 2877 6.584471 TTTATGTCCTAGATTTGGCCCTTA 57.416 37.500 0.00 0.00 0.00 2.69
2770 2878 6.780198 TTATGTCCTAGATTTGGCCCTTAT 57.220 37.500 0.00 0.00 0.00 1.73
2771 2879 4.437682 TGTCCTAGATTTGGCCCTTATG 57.562 45.455 0.00 0.00 0.00 1.90
2772 2880 3.149981 GTCCTAGATTTGGCCCTTATGC 58.850 50.000 0.00 0.00 0.00 3.14
2773 2881 2.782925 TCCTAGATTTGGCCCTTATGCA 59.217 45.455 0.00 0.00 0.00 3.96
2774 2882 3.398967 TCCTAGATTTGGCCCTTATGCAT 59.601 43.478 3.79 3.79 0.00 3.96
2775 2883 4.601420 TCCTAGATTTGGCCCTTATGCATA 59.399 41.667 1.16 1.16 0.00 3.14
2776 2884 5.253798 TCCTAGATTTGGCCCTTATGCATAT 59.746 40.000 7.36 0.00 0.00 1.78
2777 2885 6.446759 TCCTAGATTTGGCCCTTATGCATATA 59.553 38.462 7.36 0.00 0.00 0.86
2778 2886 7.129349 TCCTAGATTTGGCCCTTATGCATATAT 59.871 37.037 7.36 0.00 0.00 0.86
2779 2887 7.781693 CCTAGATTTGGCCCTTATGCATATATT 59.218 37.037 7.36 0.00 0.00 1.28
2780 2888 7.414222 AGATTTGGCCCTTATGCATATATTG 57.586 36.000 7.36 0.00 0.00 1.90
2796 2904 7.750229 CATATATTGCTTGCTCCTAGGAAAA 57.250 36.000 13.77 9.47 0.00 2.29
2797 2905 8.169977 CATATATTGCTTGCTCCTAGGAAAAA 57.830 34.615 13.77 9.11 0.00 1.94
2798 2906 8.800332 CATATATTGCTTGCTCCTAGGAAAAAT 58.200 33.333 13.77 5.78 0.00 1.82
2799 2907 7.666063 ATATTGCTTGCTCCTAGGAAAAATT 57.334 32.000 13.77 0.00 0.00 1.82
2800 2908 5.806654 TTGCTTGCTCCTAGGAAAAATTT 57.193 34.783 13.77 0.00 0.00 1.82
2801 2909 6.909550 TTGCTTGCTCCTAGGAAAAATTTA 57.090 33.333 13.77 0.00 0.00 1.40
2802 2910 6.515272 TGCTTGCTCCTAGGAAAAATTTAG 57.485 37.500 13.77 0.00 0.00 1.85
2803 2911 6.010219 TGCTTGCTCCTAGGAAAAATTTAGT 58.990 36.000 13.77 0.00 0.00 2.24
2804 2912 6.493458 TGCTTGCTCCTAGGAAAAATTTAGTT 59.507 34.615 13.77 0.00 0.00 2.24
2805 2913 7.668052 TGCTTGCTCCTAGGAAAAATTTAGTTA 59.332 33.333 13.77 0.00 0.00 2.24
2806 2914 7.968956 GCTTGCTCCTAGGAAAAATTTAGTTAC 59.031 37.037 13.77 0.00 0.00 2.50
2807 2915 9.232473 CTTGCTCCTAGGAAAAATTTAGTTACT 57.768 33.333 13.77 0.00 0.00 2.24
2808 2916 9.582648 TTGCTCCTAGGAAAAATTTAGTTACTT 57.417 29.630 13.77 0.00 0.00 2.24
2863 2971 5.950965 TTTTTGCAAACGCTATTTCGAAA 57.049 30.435 12.39 13.91 0.00 3.46
2864 2972 6.517914 TTTTTGCAAACGCTATTTCGAAAT 57.482 29.167 25.48 25.48 0.00 2.17
2865 2973 7.624706 TTTTTGCAAACGCTATTTCGAAATA 57.375 28.000 25.03 25.03 0.00 1.40
2866 2974 7.804614 TTTTGCAAACGCTATTTCGAAATAT 57.195 28.000 26.39 12.68 31.03 1.28
2867 2975 8.897457 TTTTGCAAACGCTATTTCGAAATATA 57.103 26.923 26.39 11.38 31.03 0.86
2868 2976 8.541733 TTTGCAAACGCTATTTCGAAATATAG 57.458 30.769 26.39 23.46 31.03 1.31
2869 2977 6.133392 TGCAAACGCTATTTCGAAATATAGC 58.867 36.000 26.39 25.99 43.60 2.97
2870 2978 6.133392 GCAAACGCTATTTCGAAATATAGCA 58.867 36.000 30.62 15.12 46.05 3.49
2871 2979 6.085068 GCAAACGCTATTTCGAAATATAGCAC 59.915 38.462 30.62 17.69 46.05 4.40
2872 2980 5.496330 ACGCTATTTCGAAATATAGCACG 57.504 39.130 30.62 26.05 46.05 5.34
2873 2981 4.143389 ACGCTATTTCGAAATATAGCACGC 60.143 41.667 30.62 25.25 46.05 5.34
2874 2982 4.090066 CGCTATTTCGAAATATAGCACGCT 59.910 41.667 30.62 11.05 46.05 5.07
2875 2983 5.285370 CGCTATTTCGAAATATAGCACGCTA 59.715 40.000 30.62 12.28 46.05 4.26
2876 2984 6.020599 CGCTATTTCGAAATATAGCACGCTAT 60.021 38.462 30.62 15.45 46.05 2.97
2877 2985 7.462856 CGCTATTTCGAAATATAGCACGCTATT 60.463 37.037 30.62 10.12 46.05 1.73
2878 2986 8.804743 GCTATTTCGAAATATAGCACGCTATTA 58.195 33.333 28.52 9.44 45.40 0.98
2880 2988 6.627690 TTCGAAATATAGCACGCTATTAGC 57.372 37.500 16.26 5.56 39.65 3.09
2893 3001 4.232641 GCTATTAGCGCGCTATAACTTG 57.767 45.455 38.51 24.56 0.00 3.16
2894 3002 3.673809 GCTATTAGCGCGCTATAACTTGT 59.326 43.478 38.51 20.48 0.00 3.16
2895 3003 4.433022 GCTATTAGCGCGCTATAACTTGTG 60.433 45.833 38.51 22.32 0.00 3.33
2896 3004 2.572191 TAGCGCGCTATAACTTGTGT 57.428 45.000 35.48 11.63 0.00 3.72
2897 3005 2.572191 AGCGCGCTATAACTTGTGTA 57.428 45.000 35.79 0.00 0.00 2.90
2898 3006 2.460918 AGCGCGCTATAACTTGTGTAG 58.539 47.619 35.79 0.00 0.00 2.74
2899 3007 1.071436 GCGCGCTATAACTTGTGTAGC 60.071 52.381 26.67 7.79 42.08 3.58
2900 3008 2.190161 CGCGCTATAACTTGTGTAGCA 58.810 47.619 5.56 0.00 44.89 3.49
2901 3009 2.794910 CGCGCTATAACTTGTGTAGCAT 59.205 45.455 5.56 0.00 44.89 3.79
2902 3010 3.245284 CGCGCTATAACTTGTGTAGCATT 59.755 43.478 5.56 0.00 44.89 3.56
2903 3011 4.260212 CGCGCTATAACTTGTGTAGCATTT 60.260 41.667 5.56 0.00 44.89 2.32
2904 3012 4.963953 GCGCTATAACTTGTGTAGCATTTG 59.036 41.667 0.00 4.34 44.89 2.32
2905 3013 5.501715 CGCTATAACTTGTGTAGCATTTGG 58.498 41.667 14.40 0.76 44.89 3.28
2906 3014 5.293324 CGCTATAACTTGTGTAGCATTTGGA 59.707 40.000 14.40 0.00 44.89 3.53
2907 3015 6.510157 CGCTATAACTTGTGTAGCATTTGGAG 60.510 42.308 14.40 0.00 44.89 3.86
2908 3016 6.538742 GCTATAACTTGTGTAGCATTTGGAGA 59.461 38.462 11.18 0.00 44.25 3.71
2909 3017 7.065803 GCTATAACTTGTGTAGCATTTGGAGAA 59.934 37.037 11.18 0.00 44.25 2.87
2910 3018 5.695851 AACTTGTGTAGCATTTGGAGAAG 57.304 39.130 0.00 0.00 0.00 2.85
2911 3019 4.074970 ACTTGTGTAGCATTTGGAGAAGG 58.925 43.478 0.00 0.00 0.00 3.46
2912 3020 3.071874 TGTGTAGCATTTGGAGAAGGG 57.928 47.619 0.00 0.00 0.00 3.95
2913 3021 1.745653 GTGTAGCATTTGGAGAAGGGC 59.254 52.381 0.00 0.00 0.00 5.19
2914 3022 1.340991 TGTAGCATTTGGAGAAGGGCC 60.341 52.381 0.00 0.00 0.00 5.80
2915 3023 1.064389 GTAGCATTTGGAGAAGGGCCT 60.064 52.381 0.00 0.00 0.00 5.19
2916 3024 0.033699 AGCATTTGGAGAAGGGCCTC 60.034 55.000 6.46 0.00 0.00 4.70
2917 3025 1.379642 GCATTTGGAGAAGGGCCTCG 61.380 60.000 6.46 0.00 34.08 4.63
2918 3026 1.077429 ATTTGGAGAAGGGCCTCGC 60.077 57.895 6.46 1.59 34.08 5.03
2919 3027 1.566298 ATTTGGAGAAGGGCCTCGCT 61.566 55.000 6.46 7.69 34.08 4.93
2920 3028 0.907704 TTTGGAGAAGGGCCTCGCTA 60.908 55.000 6.46 0.00 34.08 4.26
2921 3029 0.691078 TTGGAGAAGGGCCTCGCTAT 60.691 55.000 6.46 0.00 34.08 2.97
2922 3030 0.187606 TGGAGAAGGGCCTCGCTATA 59.812 55.000 6.46 0.00 34.08 1.31
2923 3031 1.203187 TGGAGAAGGGCCTCGCTATAT 60.203 52.381 6.46 0.00 34.08 0.86
2924 3032 1.903183 GGAGAAGGGCCTCGCTATATT 59.097 52.381 6.46 0.00 34.08 1.28
2925 3033 2.303311 GGAGAAGGGCCTCGCTATATTT 59.697 50.000 6.46 0.00 34.08 1.40
2926 3034 3.244596 GGAGAAGGGCCTCGCTATATTTT 60.245 47.826 6.46 0.00 34.08 1.82
2927 3035 3.744660 AGAAGGGCCTCGCTATATTTTG 58.255 45.455 6.46 0.00 0.00 2.44
2928 3036 3.136626 AGAAGGGCCTCGCTATATTTTGT 59.863 43.478 6.46 0.00 0.00 2.83
2929 3037 4.347000 AGAAGGGCCTCGCTATATTTTGTA 59.653 41.667 6.46 0.00 0.00 2.41
2930 3038 4.273148 AGGGCCTCGCTATATTTTGTAG 57.727 45.455 0.00 0.00 0.00 2.74
2931 3039 2.742589 GGGCCTCGCTATATTTTGTAGC 59.257 50.000 0.84 0.00 40.83 3.58
2938 3046 4.842139 GCTATATTTTGTAGCGCGCTAT 57.158 40.909 39.99 28.03 35.68 2.97
2939 3047 5.204673 GCTATATTTTGTAGCGCGCTATT 57.795 39.130 39.99 24.33 35.68 1.73
2940 3048 5.618561 GCTATATTTTGTAGCGCGCTATTT 58.381 37.500 39.99 23.11 35.68 1.40
2941 3049 6.077838 GCTATATTTTGTAGCGCGCTATTTT 58.922 36.000 39.99 24.95 35.68 1.82
2942 3050 6.577427 GCTATATTTTGTAGCGCGCTATTTTT 59.423 34.615 39.99 25.58 35.68 1.94
3094 3202 6.262496 GGATTTGGGGCATCTACTTTAAGTAC 59.738 42.308 0.03 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.118112 CCTAGACGGAGGGAGTACAACTA 60.118 52.174 0.00 0.00 32.39 2.24
2 3 2.022934 CCTAGACGGAGGGAGTACAAC 58.977 57.143 0.00 0.00 32.39 3.32
3 4 1.637553 ACCTAGACGGAGGGAGTACAA 59.362 52.381 0.00 0.00 41.36 2.41
4 5 1.064906 CACCTAGACGGAGGGAGTACA 60.065 57.143 0.00 0.00 41.36 2.90
5 6 1.064832 ACACCTAGACGGAGGGAGTAC 60.065 57.143 5.42 0.00 41.36 2.73
6 7 1.293062 ACACCTAGACGGAGGGAGTA 58.707 55.000 5.42 0.00 41.36 2.59
7 8 1.212441 CTACACCTAGACGGAGGGAGT 59.788 57.143 5.42 5.82 41.36 3.85
8 9 1.212441 ACTACACCTAGACGGAGGGAG 59.788 57.143 5.42 2.67 41.36 4.30
9 10 1.293062 ACTACACCTAGACGGAGGGA 58.707 55.000 5.42 0.00 41.36 4.20
10 11 1.749634 CAACTACACCTAGACGGAGGG 59.250 57.143 5.42 0.00 41.36 4.30
11 12 2.444421 ACAACTACACCTAGACGGAGG 58.556 52.381 0.00 0.00 42.89 4.30
12 13 3.065095 GCTACAACTACACCTAGACGGAG 59.935 52.174 0.00 0.00 36.31 4.63
13 14 3.012518 GCTACAACTACACCTAGACGGA 58.987 50.000 0.00 0.00 36.31 4.69
14 15 2.751259 TGCTACAACTACACCTAGACGG 59.249 50.000 0.00 0.00 39.35 4.79
15 16 3.731264 GCTGCTACAACTACACCTAGACG 60.731 52.174 0.00 0.00 0.00 4.18
16 17 3.192844 TGCTGCTACAACTACACCTAGAC 59.807 47.826 0.00 0.00 0.00 2.59
17 18 3.427573 TGCTGCTACAACTACACCTAGA 58.572 45.455 0.00 0.00 0.00 2.43
18 19 3.868757 TGCTGCTACAACTACACCTAG 57.131 47.619 0.00 0.00 0.00 3.02
19 20 4.610605 TTTGCTGCTACAACTACACCTA 57.389 40.909 0.00 0.00 0.00 3.08
20 21 3.485463 TTTGCTGCTACAACTACACCT 57.515 42.857 0.00 0.00 0.00 4.00
21 22 3.127030 GGATTTGCTGCTACAACTACACC 59.873 47.826 0.00 0.00 0.00 4.16
22 23 3.751175 TGGATTTGCTGCTACAACTACAC 59.249 43.478 0.00 0.00 0.00 2.90
23 24 4.002982 CTGGATTTGCTGCTACAACTACA 58.997 43.478 0.00 0.00 0.00 2.74
24 25 4.253685 TCTGGATTTGCTGCTACAACTAC 58.746 43.478 0.00 0.00 0.00 2.73
25 26 4.551702 TCTGGATTTGCTGCTACAACTA 57.448 40.909 0.00 0.00 0.00 2.24
26 27 3.423539 TCTGGATTTGCTGCTACAACT 57.576 42.857 0.00 0.00 0.00 3.16
27 28 3.667960 CGTTCTGGATTTGCTGCTACAAC 60.668 47.826 0.00 0.00 0.00 3.32
28 29 2.483877 CGTTCTGGATTTGCTGCTACAA 59.516 45.455 0.00 0.00 0.00 2.41
29 30 2.076100 CGTTCTGGATTTGCTGCTACA 58.924 47.619 0.00 0.00 0.00 2.74
30 31 1.398390 CCGTTCTGGATTTGCTGCTAC 59.602 52.381 0.00 0.00 42.00 3.58
31 32 1.277842 TCCGTTCTGGATTTGCTGCTA 59.722 47.619 0.00 0.00 43.74 3.49
32 33 0.036732 TCCGTTCTGGATTTGCTGCT 59.963 50.000 0.00 0.00 43.74 4.24
33 34 2.555123 TCCGTTCTGGATTTGCTGC 58.445 52.632 0.00 0.00 43.74 5.25
42 43 0.393077 ACTCTTGGTGTCCGTTCTGG 59.607 55.000 0.00 0.00 40.09 3.86
43 44 2.240493 AACTCTTGGTGTCCGTTCTG 57.760 50.000 0.00 0.00 0.00 3.02
44 45 2.802057 CGAAACTCTTGGTGTCCGTTCT 60.802 50.000 0.00 0.00 0.00 3.01
45 46 1.525619 CGAAACTCTTGGTGTCCGTTC 59.474 52.381 0.00 0.00 0.00 3.95
46 47 1.137479 TCGAAACTCTTGGTGTCCGTT 59.863 47.619 0.00 0.00 0.00 4.44
47 48 0.748450 TCGAAACTCTTGGTGTCCGT 59.252 50.000 0.00 0.00 0.00 4.69
48 49 1.419374 CTCGAAACTCTTGGTGTCCG 58.581 55.000 0.00 0.00 0.00 4.79
49 50 1.149148 GCTCGAAACTCTTGGTGTCC 58.851 55.000 0.00 0.00 0.00 4.02
50 51 1.149148 GGCTCGAAACTCTTGGTGTC 58.851 55.000 0.00 0.00 0.00 3.67
51 52 0.759346 AGGCTCGAAACTCTTGGTGT 59.241 50.000 0.00 0.00 0.00 4.16
52 53 1.433534 GAGGCTCGAAACTCTTGGTG 58.566 55.000 0.00 0.00 0.00 4.17
53 54 0.321996 GGAGGCTCGAAACTCTTGGT 59.678 55.000 8.69 0.00 34.22 3.67
54 55 0.391793 GGGAGGCTCGAAACTCTTGG 60.392 60.000 8.69 0.00 34.22 3.61
55 56 0.391793 GGGGAGGCTCGAAACTCTTG 60.392 60.000 8.69 0.00 34.22 3.02
56 57 1.889530 CGGGGAGGCTCGAAACTCTT 61.890 60.000 8.69 0.00 34.22 2.85
57 58 2.352032 CGGGGAGGCTCGAAACTCT 61.352 63.158 8.69 0.00 34.22 3.24
58 59 2.184579 CGGGGAGGCTCGAAACTC 59.815 66.667 8.69 7.34 0.00 3.01
59 60 3.391382 CCGGGGAGGCTCGAAACT 61.391 66.667 8.69 0.00 0.00 2.66
68 69 2.271173 GTAAAGTGGCCGGGGAGG 59.729 66.667 2.18 0.00 44.97 4.30
69 70 1.078426 CAGTAAAGTGGCCGGGGAG 60.078 63.158 2.18 0.00 0.00 4.30
70 71 1.420532 AACAGTAAAGTGGCCGGGGA 61.421 55.000 2.18 0.00 0.00 4.81
71 72 0.538746 AAACAGTAAAGTGGCCGGGG 60.539 55.000 2.18 0.00 0.00 5.73
72 73 1.324383 AAAACAGTAAAGTGGCCGGG 58.676 50.000 2.18 0.00 0.00 5.73
73 74 2.287970 GGAAAAACAGTAAAGTGGCCGG 60.288 50.000 0.00 0.00 0.00 6.13
74 75 2.287970 GGGAAAAACAGTAAAGTGGCCG 60.288 50.000 0.00 0.00 0.00 6.13
75 76 2.963101 AGGGAAAAACAGTAAAGTGGCC 59.037 45.455 0.00 0.00 0.00 5.36
76 77 3.889538 AGAGGGAAAAACAGTAAAGTGGC 59.110 43.478 0.00 0.00 0.00 5.01
77 78 7.168905 AGATAGAGGGAAAAACAGTAAAGTGG 58.831 38.462 0.00 0.00 0.00 4.00
78 79 8.622948 AAGATAGAGGGAAAAACAGTAAAGTG 57.377 34.615 0.00 0.00 0.00 3.16
79 80 9.286170 GAAAGATAGAGGGAAAAACAGTAAAGT 57.714 33.333 0.00 0.00 0.00 2.66
80 81 9.508642 AGAAAGATAGAGGGAAAAACAGTAAAG 57.491 33.333 0.00 0.00 0.00 1.85
81 82 9.503399 GAGAAAGATAGAGGGAAAAACAGTAAA 57.497 33.333 0.00 0.00 0.00 2.01
82 83 7.817962 CGAGAAAGATAGAGGGAAAAACAGTAA 59.182 37.037 0.00 0.00 0.00 2.24
83 84 7.039223 ACGAGAAAGATAGAGGGAAAAACAGTA 60.039 37.037 0.00 0.00 0.00 2.74
84 85 6.166982 CGAGAAAGATAGAGGGAAAAACAGT 58.833 40.000 0.00 0.00 0.00 3.55
85 86 6.091441 CACGAGAAAGATAGAGGGAAAAACAG 59.909 42.308 0.00 0.00 0.00 3.16
86 87 5.932303 CACGAGAAAGATAGAGGGAAAAACA 59.068 40.000 0.00 0.00 0.00 2.83
87 88 5.351740 CCACGAGAAAGATAGAGGGAAAAAC 59.648 44.000 0.00 0.00 0.00 2.43
88 89 5.012768 ACCACGAGAAAGATAGAGGGAAAAA 59.987 40.000 0.00 0.00 0.00 1.94
89 90 4.530946 ACCACGAGAAAGATAGAGGGAAAA 59.469 41.667 0.00 0.00 0.00 2.29
90 91 4.094476 ACCACGAGAAAGATAGAGGGAAA 58.906 43.478 0.00 0.00 0.00 3.13
91 92 3.709587 ACCACGAGAAAGATAGAGGGAA 58.290 45.455 0.00 0.00 0.00 3.97
92 93 3.383698 ACCACGAGAAAGATAGAGGGA 57.616 47.619 0.00 0.00 0.00 4.20
93 94 3.430929 CCAACCACGAGAAAGATAGAGGG 60.431 52.174 0.00 0.00 0.00 4.30
94 95 3.195825 ACCAACCACGAGAAAGATAGAGG 59.804 47.826 0.00 0.00 0.00 3.69
95 96 4.457834 ACCAACCACGAGAAAGATAGAG 57.542 45.455 0.00 0.00 0.00 2.43
96 97 4.562757 CCAACCAACCACGAGAAAGATAGA 60.563 45.833 0.00 0.00 0.00 1.98
97 98 3.684788 CCAACCAACCACGAGAAAGATAG 59.315 47.826 0.00 0.00 0.00 2.08
98 99 3.071892 ACCAACCAACCACGAGAAAGATA 59.928 43.478 0.00 0.00 0.00 1.98
99 100 2.158667 ACCAACCAACCACGAGAAAGAT 60.159 45.455 0.00 0.00 0.00 2.40
100 101 1.210967 ACCAACCAACCACGAGAAAGA 59.789 47.619 0.00 0.00 0.00 2.52
101 102 1.333619 CACCAACCAACCACGAGAAAG 59.666 52.381 0.00 0.00 0.00 2.62
184 187 4.159693 GGAGTGGTGTTTTCCTTCAAAAGT 59.840 41.667 0.00 0.00 34.49 2.66
225 228 5.576563 TCACCATAGAAAAAGTCCCTGAA 57.423 39.130 0.00 0.00 0.00 3.02
283 287 8.267894 ACATATTAATCTAGTTTCAGTGCCAGT 58.732 33.333 0.00 0.00 0.00 4.00
335 340 5.049129 GCAACTCTACATATTCTGGGCATTC 60.049 44.000 0.00 0.00 0.00 2.67
394 399 5.338871 GGGGTGTGATATGTCTCAAAGGTAA 60.339 44.000 0.00 0.00 30.40 2.85
449 454 5.863935 TGAGTCGAGTGTATTTTCTCATGTG 59.136 40.000 0.00 0.00 0.00 3.21
472 477 1.575244 CATGTCGGCACCTAGATGTG 58.425 55.000 0.00 0.00 39.29 3.21
523 528 1.330829 GCGCTGCCTATAAACCAAGTC 59.669 52.381 0.00 0.00 0.00 3.01
620 698 1.682854 CAACATGCAAAGTGTCCACCT 59.317 47.619 0.00 0.00 0.00 4.00
621 699 1.269726 CCAACATGCAAAGTGTCCACC 60.270 52.381 0.00 0.00 0.00 4.61
622 700 1.269726 CCCAACATGCAAAGTGTCCAC 60.270 52.381 0.00 0.00 0.00 4.02
623 701 1.039068 CCCAACATGCAAAGTGTCCA 58.961 50.000 0.00 0.00 0.00 4.02
624 702 1.000274 GACCCAACATGCAAAGTGTCC 60.000 52.381 0.00 0.00 0.00 4.02
625 703 1.680735 TGACCCAACATGCAAAGTGTC 59.319 47.619 0.00 0.00 0.00 3.67
626 704 1.774110 TGACCCAACATGCAAAGTGT 58.226 45.000 0.00 0.00 0.00 3.55
627 705 2.886862 TTGACCCAACATGCAAAGTG 57.113 45.000 0.00 0.00 0.00 3.16
628 706 3.494749 CCAATTGACCCAACATGCAAAGT 60.495 43.478 7.12 0.00 0.00 2.66
629 707 3.068560 CCAATTGACCCAACATGCAAAG 58.931 45.455 7.12 0.00 0.00 2.77
630 708 2.224475 CCCAATTGACCCAACATGCAAA 60.224 45.455 7.12 0.00 0.00 3.68
631 709 1.347050 CCCAATTGACCCAACATGCAA 59.653 47.619 7.12 0.00 0.00 4.08
632 710 0.975135 CCCAATTGACCCAACATGCA 59.025 50.000 7.12 0.00 0.00 3.96
633 711 1.066929 GTCCCAATTGACCCAACATGC 60.067 52.381 7.12 0.00 0.00 4.06
634 712 2.246469 TGTCCCAATTGACCCAACATG 58.754 47.619 7.12 0.00 34.25 3.21
635 713 2.692709 TGTCCCAATTGACCCAACAT 57.307 45.000 7.12 0.00 34.25 2.71
636 714 2.432510 GTTTGTCCCAATTGACCCAACA 59.567 45.455 7.12 0.97 34.25 3.33
637 715 2.698274 AGTTTGTCCCAATTGACCCAAC 59.302 45.455 7.12 4.52 34.25 3.77
638 716 3.039252 AGTTTGTCCCAATTGACCCAA 57.961 42.857 7.12 3.43 34.25 4.12
639 717 2.765689 AGTTTGTCCCAATTGACCCA 57.234 45.000 7.12 0.00 34.25 4.51
640 718 3.230976 AGAAGTTTGTCCCAATTGACCC 58.769 45.455 7.12 0.00 34.25 4.46
644 722 8.143835 ACATTCTTAAGAAGTTTGTCCCAATTG 58.856 33.333 21.75 12.86 37.48 2.32
711 789 2.483876 TGCCAAGCTAGACGCATAATC 58.516 47.619 0.00 0.00 42.61 1.75
745 823 1.202302 TGAAATGCCAAAAACGCGTGA 60.202 42.857 14.98 0.00 0.00 4.35
746 824 1.189884 CTGAAATGCCAAAAACGCGTG 59.810 47.619 14.98 0.00 0.00 5.34
748 826 1.486439 ACTGAAATGCCAAAAACGCG 58.514 45.000 3.53 3.53 0.00 6.01
749 827 5.194657 GTTTAACTGAAATGCCAAAAACGC 58.805 37.500 0.00 0.00 0.00 4.84
781 859 8.238481 ACATATTTTGCTACCGTTTGAAAATG 57.762 30.769 0.00 0.00 30.78 2.32
782 860 7.272515 CGACATATTTTGCTACCGTTTGAAAAT 59.727 33.333 0.00 0.00 32.46 1.82
805 884 0.872388 AATTTCTGTTGTCCCGCGAC 59.128 50.000 8.23 0.00 39.66 5.19
950 1038 1.626654 GCACACTCACGGTTCCATCG 61.627 60.000 0.00 0.00 0.00 3.84
953 1041 1.522806 GTGCACACTCACGGTTCCA 60.523 57.895 13.17 0.00 0.00 3.53
954 1042 1.227556 AGTGCACACTCACGGTTCC 60.228 57.895 21.04 0.00 41.61 3.62
955 1043 4.438346 AGTGCACACTCACGGTTC 57.562 55.556 21.04 0.00 41.61 3.62
973 1061 0.526524 GACTGAGCGACCGAGATTGG 60.527 60.000 0.00 0.00 0.00 3.16
1474 1564 1.280421 CTTTCCCTCCCTGGAGAACTG 59.720 57.143 14.86 0.00 44.53 3.16
1723 1813 6.920569 TTTTCTTGACAACAGAAGGACTAC 57.079 37.500 0.00 0.00 0.00 2.73
1796 1886 7.599998 GCAAAACCAAAGTCATACAAGATTGAT 59.400 33.333 0.00 0.00 0.00 2.57
1816 1906 3.058224 ACAAAGGATCACGCTAGCAAAAC 60.058 43.478 16.45 1.59 0.00 2.43
1864 1954 7.987458 ACAACACCTGACATCTACATAATTAGG 59.013 37.037 0.00 0.00 0.00 2.69
1960 2051 9.463443 CCGGAGAATGGTTAAATATGATTTTTC 57.537 33.333 0.00 0.00 0.00 2.29
1992 2083 0.385723 GTCTCGTCAGGTCACGTCAC 60.386 60.000 0.00 0.00 40.79 3.67
2045 2136 8.394877 CACACGTGAAACATATATACAATGGTT 58.605 33.333 25.01 0.83 36.97 3.67
2046 2137 7.766738 TCACACGTGAAACATATATACAATGGT 59.233 33.333 25.01 0.00 36.53 3.55
2071 2162 8.162878 TCAGATGATGAATTTAGCAATCCTTC 57.837 34.615 0.00 0.00 34.02 3.46
2105 2196 8.174733 AGAAGAAATTGTTCATTGTCATGACT 57.825 30.769 25.55 4.51 39.28 3.41
2113 2204 7.380536 TCCCATGAAGAAGAAATTGTTCATTG 58.619 34.615 9.79 7.48 41.24 2.82
2115 2206 6.350780 GCTCCCATGAAGAAGAAATTGTTCAT 60.351 38.462 5.67 7.35 43.10 2.57
2116 2207 5.047802 GCTCCCATGAAGAAGAAATTGTTCA 60.048 40.000 5.67 3.45 38.35 3.18
2120 2211 4.381292 GGTGCTCCCATGAAGAAGAAATTG 60.381 45.833 0.00 0.00 0.00 2.32
2141 2233 1.900545 GAGTTGGGCCTTCTAGCGGT 61.901 60.000 4.53 0.00 0.00 5.68
2143 2235 0.179097 GAGAGTTGGGCCTTCTAGCG 60.179 60.000 4.53 0.00 0.00 4.26
2182 2276 1.803519 GTGAGTCTGCGCCTTCTCG 60.804 63.158 4.18 0.00 0.00 4.04
2195 2289 5.627182 AGAGGAAATGCATGATAGTGAGT 57.373 39.130 0.00 0.00 0.00 3.41
2207 2301 1.064832 AGCCTGAGGAAGAGGAAATGC 60.065 52.381 0.65 0.00 31.48 3.56
2336 2440 5.817816 CACCTGAGTTTGGTTATGATCCTAC 59.182 44.000 0.00 0.00 35.28 3.18
2419 2523 3.117663 TTAGGGGTGCATTCCCATAAGAC 60.118 47.826 24.31 3.96 45.21 3.01
2426 2530 1.474330 CAAGTTAGGGGTGCATTCCC 58.526 55.000 17.48 17.48 46.31 3.97
2427 2531 0.817654 GCAAGTTAGGGGTGCATTCC 59.182 55.000 0.00 0.00 38.19 3.01
2437 2545 4.223032 TGTCTAGAGAAAGGGCAAGTTAGG 59.777 45.833 0.00 0.00 0.00 2.69
2483 2591 0.249322 ACGGCGAAATAGCGTGCTAT 60.249 50.000 16.62 8.54 40.63 2.97
2484 2592 0.458889 AACGGCGAAATAGCGTGCTA 60.459 50.000 16.62 3.73 38.18 3.49
2485 2593 0.458889 TAACGGCGAAATAGCGTGCT 60.459 50.000 16.62 0.00 38.18 4.40
2486 2594 0.580104 ATAACGGCGAAATAGCGTGC 59.420 50.000 16.62 0.00 38.18 5.34
2487 2595 3.780054 GTTATAACGGCGAAATAGCGTG 58.220 45.455 16.62 0.00 38.18 5.34
2501 2609 8.474577 CCGAATATGATATAACCGCGTTATAAC 58.525 37.037 18.38 16.72 42.02 1.89
2502 2610 8.404765 TCCGAATATGATATAACCGCGTTATAA 58.595 33.333 18.38 8.96 42.02 0.98
2503 2611 7.929159 TCCGAATATGATATAACCGCGTTATA 58.071 34.615 17.41 17.41 42.62 0.98
2504 2612 6.798482 TCCGAATATGATATAACCGCGTTAT 58.202 36.000 4.92 11.68 41.02 1.89
2505 2613 6.193514 TCCGAATATGATATAACCGCGTTA 57.806 37.500 4.92 4.43 32.36 3.18
2506 2614 5.063180 TCCGAATATGATATAACCGCGTT 57.937 39.130 4.92 1.95 0.00 4.84
2507 2615 4.707030 TCCGAATATGATATAACCGCGT 57.293 40.909 4.92 0.00 0.00 6.01
2508 2616 4.503007 CCTTCCGAATATGATATAACCGCG 59.497 45.833 0.00 0.00 0.00 6.46
2509 2617 4.809426 CCCTTCCGAATATGATATAACCGC 59.191 45.833 0.00 0.00 0.00 5.68
2510 2618 6.096423 TCTCCCTTCCGAATATGATATAACCG 59.904 42.308 0.00 0.00 0.00 4.44
2511 2619 7.266400 GTCTCCCTTCCGAATATGATATAACC 58.734 42.308 0.00 0.00 0.00 2.85
2512 2620 6.973474 CGTCTCCCTTCCGAATATGATATAAC 59.027 42.308 0.00 0.00 0.00 1.89
2513 2621 6.662234 ACGTCTCCCTTCCGAATATGATATAA 59.338 38.462 0.00 0.00 0.00 0.98
2514 2622 6.185511 ACGTCTCCCTTCCGAATATGATATA 58.814 40.000 0.00 0.00 0.00 0.86
2515 2623 5.017490 ACGTCTCCCTTCCGAATATGATAT 58.983 41.667 0.00 0.00 0.00 1.63
2516 2624 4.404640 ACGTCTCCCTTCCGAATATGATA 58.595 43.478 0.00 0.00 0.00 2.15
2517 2625 3.231818 ACGTCTCCCTTCCGAATATGAT 58.768 45.455 0.00 0.00 0.00 2.45
2518 2626 2.662866 ACGTCTCCCTTCCGAATATGA 58.337 47.619 0.00 0.00 0.00 2.15
2519 2627 3.454371 AACGTCTCCCTTCCGAATATG 57.546 47.619 0.00 0.00 0.00 1.78
2520 2628 3.004106 CGTAACGTCTCCCTTCCGAATAT 59.996 47.826 0.00 0.00 0.00 1.28
2521 2629 2.355756 CGTAACGTCTCCCTTCCGAATA 59.644 50.000 0.00 0.00 0.00 1.75
2522 2630 1.133790 CGTAACGTCTCCCTTCCGAAT 59.866 52.381 0.00 0.00 0.00 3.34
2523 2631 0.523072 CGTAACGTCTCCCTTCCGAA 59.477 55.000 0.00 0.00 0.00 4.30
2524 2632 0.606401 ACGTAACGTCTCCCTTCCGA 60.606 55.000 0.00 0.00 33.69 4.55
2525 2633 0.242017 AACGTAACGTCTCCCTTCCG 59.758 55.000 0.00 0.00 39.99 4.30
2526 2634 2.445565 AAACGTAACGTCTCCCTTCC 57.554 50.000 0.00 0.00 39.99 3.46
2527 2635 2.477754 CCAAAACGTAACGTCTCCCTTC 59.522 50.000 0.00 0.00 39.99 3.46
2528 2636 2.486918 CCAAAACGTAACGTCTCCCTT 58.513 47.619 0.00 0.00 39.99 3.95
2529 2637 1.875157 GCCAAAACGTAACGTCTCCCT 60.875 52.381 0.00 0.00 39.99 4.20
2530 2638 0.514255 GCCAAAACGTAACGTCTCCC 59.486 55.000 0.00 0.00 39.99 4.30
2531 2639 1.219646 TGCCAAAACGTAACGTCTCC 58.780 50.000 0.00 0.00 39.99 3.71
2532 2640 3.322230 TTTGCCAAAACGTAACGTCTC 57.678 42.857 0.00 0.00 39.99 3.36
2533 2641 3.761311 TTTTGCCAAAACGTAACGTCT 57.239 38.095 0.00 0.00 39.99 4.18
2534 2642 3.116700 CGATTTTGCCAAAACGTAACGTC 59.883 43.478 4.45 0.00 39.99 4.34
2535 2643 3.037324 CGATTTTGCCAAAACGTAACGT 58.963 40.909 4.45 0.00 43.97 3.99
2536 2644 2.402378 CCGATTTTGCCAAAACGTAACG 59.598 45.455 4.45 6.54 32.37 3.18
2537 2645 2.154198 GCCGATTTTGCCAAAACGTAAC 59.846 45.455 4.45 0.91 32.37 2.50
2538 2646 2.395654 GCCGATTTTGCCAAAACGTAA 58.604 42.857 4.45 0.00 32.37 3.18
2539 2647 2.053282 GCCGATTTTGCCAAAACGTA 57.947 45.000 4.45 0.00 32.37 3.57
2540 2648 2.893671 GCCGATTTTGCCAAAACGT 58.106 47.368 4.45 0.00 32.37 3.99
2547 2655 2.407616 GTAGCGGCCGATTTTGCC 59.592 61.111 33.48 9.31 45.70 4.52
2548 2656 2.022762 CGTAGCGGCCGATTTTGC 59.977 61.111 33.48 10.17 0.00 3.68
2549 2657 2.707039 CCGTAGCGGCCGATTTTG 59.293 61.111 33.48 16.00 41.17 2.44
2560 2668 0.317269 TACGTGATTAGCGCCGTAGC 60.317 55.000 2.29 0.00 34.95 3.58
2561 2669 2.109609 TTACGTGATTAGCGCCGTAG 57.890 50.000 2.29 0.00 37.14 3.51
2562 2670 2.780065 ATTACGTGATTAGCGCCGTA 57.220 45.000 2.29 7.05 34.95 4.02
2563 2671 1.930567 AATTACGTGATTAGCGCCGT 58.069 45.000 2.29 8.23 37.33 5.68
2564 2672 3.683115 CTAATTACGTGATTAGCGCCG 57.317 47.619 22.43 0.84 34.05 6.46
2569 2677 2.724690 AGCGCGCTAATTACGTGATTAG 59.275 45.455 35.79 27.16 43.44 1.73
2570 2678 2.734670 AGCGCGCTAATTACGTGATTA 58.265 42.857 35.79 11.75 43.44 1.75
2571 2679 1.567504 AGCGCGCTAATTACGTGATT 58.432 45.000 35.79 10.64 43.44 2.57
2572 2680 2.049228 GTAGCGCGCTAATTACGTGAT 58.951 47.619 39.73 14.38 43.44 3.06
2573 2681 1.202166 TGTAGCGCGCTAATTACGTGA 60.202 47.619 39.73 16.67 43.44 4.35
2574 2682 1.072348 GTGTAGCGCGCTAATTACGTG 60.072 52.381 39.73 13.23 43.59 4.49
2575 2683 1.194495 GTGTAGCGCGCTAATTACGT 58.806 50.000 39.73 16.53 0.00 3.57
2576 2684 1.072348 GTGTGTAGCGCGCTAATTACG 60.072 52.381 39.73 0.00 0.00 3.18
2577 2685 1.072348 CGTGTGTAGCGCGCTAATTAC 60.072 52.381 39.73 33.48 44.35 1.89
2578 2686 1.193644 CGTGTGTAGCGCGCTAATTA 58.806 50.000 39.73 26.04 44.35 1.40
2579 2687 1.995991 CGTGTGTAGCGCGCTAATT 59.004 52.632 39.73 19.37 44.35 1.40
2580 2688 3.688136 CGTGTGTAGCGCGCTAAT 58.312 55.556 39.73 19.77 44.35 1.73
2587 2695 1.818850 ACGTTATAGCGTGTGTAGCG 58.181 50.000 14.14 0.00 43.99 4.26
2588 2696 2.919229 ACAACGTTATAGCGTGTGTAGC 59.081 45.455 15.60 0.00 45.00 3.58
2589 2697 4.203764 GCTACAACGTTATAGCGTGTGTAG 59.796 45.833 31.25 31.25 45.46 2.74
2590 2698 4.097714 GCTACAACGTTATAGCGTGTGTA 58.902 43.478 21.62 20.12 45.00 2.90
2591 2699 2.919229 GCTACAACGTTATAGCGTGTGT 59.081 45.455 21.62 22.53 45.00 3.72
2592 2700 3.548216 GCTACAACGTTATAGCGTGTG 57.452 47.619 21.62 16.16 45.00 3.82
2620 2728 1.696988 CATGGCCTGCACGTTAAAAC 58.303 50.000 3.32 0.00 0.00 2.43
2631 2739 2.137523 GTTTCAGTTTTGCATGGCCTG 58.862 47.619 3.32 0.34 0.00 4.85
2632 2740 1.761784 TGTTTCAGTTTTGCATGGCCT 59.238 42.857 3.32 0.00 0.00 5.19
2633 2741 2.237393 TGTTTCAGTTTTGCATGGCC 57.763 45.000 0.00 0.00 0.00 5.36
2634 2742 2.287644 GGTTGTTTCAGTTTTGCATGGC 59.712 45.455 0.00 0.00 0.00 4.40
2635 2743 3.309410 GTGGTTGTTTCAGTTTTGCATGG 59.691 43.478 0.00 0.00 0.00 3.66
2636 2744 3.931468 TGTGGTTGTTTCAGTTTTGCATG 59.069 39.130 0.00 0.00 0.00 4.06
2637 2745 4.183101 CTGTGGTTGTTTCAGTTTTGCAT 58.817 39.130 0.00 0.00 0.00 3.96
2638 2746 3.583806 CTGTGGTTGTTTCAGTTTTGCA 58.416 40.909 0.00 0.00 0.00 4.08
2639 2747 2.348362 GCTGTGGTTGTTTCAGTTTTGC 59.652 45.455 0.00 0.00 0.00 3.68
2640 2748 2.929398 GGCTGTGGTTGTTTCAGTTTTG 59.071 45.455 0.00 0.00 0.00 2.44
2641 2749 2.093711 GGGCTGTGGTTGTTTCAGTTTT 60.094 45.455 0.00 0.00 0.00 2.43
2642 2750 1.480545 GGGCTGTGGTTGTTTCAGTTT 59.519 47.619 0.00 0.00 0.00 2.66
2643 2751 1.111277 GGGCTGTGGTTGTTTCAGTT 58.889 50.000 0.00 0.00 0.00 3.16
2644 2752 0.033601 TGGGCTGTGGTTGTTTCAGT 60.034 50.000 0.00 0.00 0.00 3.41
2645 2753 0.670162 CTGGGCTGTGGTTGTTTCAG 59.330 55.000 0.00 0.00 0.00 3.02
2646 2754 1.391157 GCTGGGCTGTGGTTGTTTCA 61.391 55.000 0.00 0.00 0.00 2.69
2647 2755 1.363807 GCTGGGCTGTGGTTGTTTC 59.636 57.895 0.00 0.00 0.00 2.78
2648 2756 2.133641 GGCTGGGCTGTGGTTGTTT 61.134 57.895 0.00 0.00 0.00 2.83
2649 2757 2.521708 GGCTGGGCTGTGGTTGTT 60.522 61.111 0.00 0.00 0.00 2.83
2650 2758 4.954970 CGGCTGGGCTGTGGTTGT 62.955 66.667 0.00 0.00 0.00 3.32
2669 2777 2.139484 TTGGTTTTGGCCTGCTGGG 61.139 57.895 12.06 1.66 38.36 4.45
2670 2778 1.069596 GTTGGTTTTGGCCTGCTGG 59.930 57.895 3.32 5.03 0.00 4.85
2671 2779 1.069596 GGTTGGTTTTGGCCTGCTG 59.930 57.895 3.32 0.00 0.00 4.41
2672 2780 2.140138 GGGTTGGTTTTGGCCTGCT 61.140 57.895 3.32 0.00 0.00 4.24
2673 2781 2.425592 GGGTTGGTTTTGGCCTGC 59.574 61.111 3.32 0.00 0.00 4.85
2674 2782 1.445518 GTGGGTTGGTTTTGGCCTG 59.554 57.895 3.32 0.00 0.00 4.85
2675 2783 2.131067 CGTGGGTTGGTTTTGGCCT 61.131 57.895 3.32 0.00 0.00 5.19
2676 2784 2.128507 TCGTGGGTTGGTTTTGGCC 61.129 57.895 0.00 0.00 0.00 5.36
2677 2785 1.066752 GTCGTGGGTTGGTTTTGGC 59.933 57.895 0.00 0.00 0.00 4.52
2678 2786 1.038130 TGGTCGTGGGTTGGTTTTGG 61.038 55.000 0.00 0.00 0.00 3.28
2679 2787 0.101579 GTGGTCGTGGGTTGGTTTTG 59.898 55.000 0.00 0.00 0.00 2.44
2680 2788 0.033894 AGTGGTCGTGGGTTGGTTTT 60.034 50.000 0.00 0.00 0.00 2.43
2681 2789 0.838608 TAGTGGTCGTGGGTTGGTTT 59.161 50.000 0.00 0.00 0.00 3.27
2682 2790 0.107268 GTAGTGGTCGTGGGTTGGTT 59.893 55.000 0.00 0.00 0.00 3.67
2683 2791 1.750297 GTAGTGGTCGTGGGTTGGT 59.250 57.895 0.00 0.00 0.00 3.67
2684 2792 1.004200 GGTAGTGGTCGTGGGTTGG 60.004 63.158 0.00 0.00 0.00 3.77
2685 2793 0.395312 AAGGTAGTGGTCGTGGGTTG 59.605 55.000 0.00 0.00 0.00 3.77
2686 2794 1.071228 GAAAGGTAGTGGTCGTGGGTT 59.929 52.381 0.00 0.00 0.00 4.11
2687 2795 0.683412 GAAAGGTAGTGGTCGTGGGT 59.317 55.000 0.00 0.00 0.00 4.51
2688 2796 0.974383 AGAAAGGTAGTGGTCGTGGG 59.026 55.000 0.00 0.00 0.00 4.61
2689 2797 1.616865 TGAGAAAGGTAGTGGTCGTGG 59.383 52.381 0.00 0.00 0.00 4.94
2690 2798 2.296471 AGTGAGAAAGGTAGTGGTCGTG 59.704 50.000 0.00 0.00 0.00 4.35
2691 2799 2.557490 GAGTGAGAAAGGTAGTGGTCGT 59.443 50.000 0.00 0.00 0.00 4.34
2692 2800 2.820787 AGAGTGAGAAAGGTAGTGGTCG 59.179 50.000 0.00 0.00 0.00 4.79
2693 2801 4.875561 AAGAGTGAGAAAGGTAGTGGTC 57.124 45.455 0.00 0.00 0.00 4.02
2694 2802 5.632034 AAAAGAGTGAGAAAGGTAGTGGT 57.368 39.130 0.00 0.00 0.00 4.16
2695 2803 8.097662 AGATAAAAAGAGTGAGAAAGGTAGTGG 58.902 37.037 0.00 0.00 0.00 4.00
2696 2804 9.495572 AAGATAAAAAGAGTGAGAAAGGTAGTG 57.504 33.333 0.00 0.00 0.00 2.74
2697 2805 9.495572 CAAGATAAAAAGAGTGAGAAAGGTAGT 57.504 33.333 0.00 0.00 0.00 2.73
2698 2806 9.712305 TCAAGATAAAAAGAGTGAGAAAGGTAG 57.288 33.333 0.00 0.00 0.00 3.18
2700 2808 8.980481 TTCAAGATAAAAAGAGTGAGAAAGGT 57.020 30.769 0.00 0.00 0.00 3.50
2701 2809 9.670719 GTTTCAAGATAAAAAGAGTGAGAAAGG 57.329 33.333 0.00 0.00 0.00 3.11
2704 2812 9.396022 ACAGTTTCAAGATAAAAAGAGTGAGAA 57.604 29.630 0.00 0.00 0.00 2.87
2705 2813 8.964476 ACAGTTTCAAGATAAAAAGAGTGAGA 57.036 30.769 0.00 0.00 0.00 3.27
2707 2815 9.787532 CAAACAGTTTCAAGATAAAAAGAGTGA 57.212 29.630 0.00 0.00 0.00 3.41
2708 2816 9.787532 TCAAACAGTTTCAAGATAAAAAGAGTG 57.212 29.630 0.00 0.00 0.00 3.51
2716 2824 9.607988 TGTAAGTCTCAAACAGTTTCAAGATAA 57.392 29.630 9.76 0.00 0.00 1.75
2717 2825 9.607988 TTGTAAGTCTCAAACAGTTTCAAGATA 57.392 29.630 9.76 0.16 0.00 1.98
2718 2826 8.506168 TTGTAAGTCTCAAACAGTTTCAAGAT 57.494 30.769 9.76 0.88 0.00 2.40
2719 2827 7.915293 TTGTAAGTCTCAAACAGTTTCAAGA 57.085 32.000 0.00 0.00 0.00 3.02
2720 2828 9.573133 AAATTGTAAGTCTCAAACAGTTTCAAG 57.427 29.630 0.00 0.00 30.19 3.02
2721 2829 9.921637 AAAATTGTAAGTCTCAAACAGTTTCAA 57.078 25.926 0.00 0.00 33.57 2.69
2722 2830 9.921637 AAAAATTGTAAGTCTCAAACAGTTTCA 57.078 25.926 0.00 0.00 33.57 2.69
2728 2836 9.959749 GGACATAAAAATTGTAAGTCTCAAACA 57.040 29.630 0.00 0.00 0.00 2.83
2739 2847 8.691797 GGCCAAATCTAGGACATAAAAATTGTA 58.308 33.333 0.00 0.00 33.02 2.41
2740 2848 7.364673 GGGCCAAATCTAGGACATAAAAATTGT 60.365 37.037 4.39 0.00 35.15 2.71
2741 2849 6.986231 GGGCCAAATCTAGGACATAAAAATTG 59.014 38.462 4.39 0.00 35.15 2.32
2742 2850 6.902974 AGGGCCAAATCTAGGACATAAAAATT 59.097 34.615 6.18 0.00 35.15 1.82
2743 2851 6.443832 AGGGCCAAATCTAGGACATAAAAAT 58.556 36.000 6.18 0.00 35.15 1.82
2744 2852 5.837829 AGGGCCAAATCTAGGACATAAAAA 58.162 37.500 6.18 0.00 35.15 1.94
2745 2853 5.466127 AGGGCCAAATCTAGGACATAAAA 57.534 39.130 6.18 0.00 35.15 1.52
2746 2854 5.466127 AAGGGCCAAATCTAGGACATAAA 57.534 39.130 6.18 0.00 35.15 1.40
2747 2855 6.542821 CATAAGGGCCAAATCTAGGACATAA 58.457 40.000 6.18 0.00 35.15 1.90
2748 2856 5.514834 GCATAAGGGCCAAATCTAGGACATA 60.515 44.000 6.18 0.00 35.15 2.29
2749 2857 4.751028 GCATAAGGGCCAAATCTAGGACAT 60.751 45.833 6.18 0.00 35.15 3.06
2750 2858 3.435026 GCATAAGGGCCAAATCTAGGACA 60.435 47.826 6.18 0.00 35.15 4.02
2751 2859 3.149981 GCATAAGGGCCAAATCTAGGAC 58.850 50.000 6.18 0.00 0.00 3.85
2752 2860 2.782925 TGCATAAGGGCCAAATCTAGGA 59.217 45.455 6.18 0.00 0.00 2.94
2753 2861 3.228188 TGCATAAGGGCCAAATCTAGG 57.772 47.619 6.18 0.00 0.00 3.02
2754 2862 8.627403 CAATATATGCATAAGGGCCAAATCTAG 58.373 37.037 11.13 0.00 0.00 2.43
2755 2863 8.523915 CAATATATGCATAAGGGCCAAATCTA 57.476 34.615 11.13 0.00 0.00 1.98
2756 2864 7.414222 CAATATATGCATAAGGGCCAAATCT 57.586 36.000 11.13 0.00 0.00 2.40
2772 2880 7.750229 TTTTCCTAGGAGCAAGCAATATATG 57.250 36.000 12.26 0.00 0.00 1.78
2773 2881 8.946797 ATTTTTCCTAGGAGCAAGCAATATAT 57.053 30.769 12.26 0.00 0.00 0.86
2774 2882 8.766994 AATTTTTCCTAGGAGCAAGCAATATA 57.233 30.769 12.26 0.00 0.00 0.86
2775 2883 7.666063 AATTTTTCCTAGGAGCAAGCAATAT 57.334 32.000 12.26 0.49 0.00 1.28
2776 2884 7.480760 AAATTTTTCCTAGGAGCAAGCAATA 57.519 32.000 12.26 0.00 0.00 1.90
2777 2885 6.364568 AAATTTTTCCTAGGAGCAAGCAAT 57.635 33.333 12.26 0.00 0.00 3.56
2778 2886 5.806654 AAATTTTTCCTAGGAGCAAGCAA 57.193 34.783 12.26 0.00 0.00 3.91
2779 2887 6.010219 ACTAAATTTTTCCTAGGAGCAAGCA 58.990 36.000 12.26 0.00 0.00 3.91
2780 2888 6.516739 ACTAAATTTTTCCTAGGAGCAAGC 57.483 37.500 12.26 0.00 0.00 4.01
2781 2889 9.232473 AGTAACTAAATTTTTCCTAGGAGCAAG 57.768 33.333 12.26 6.68 0.00 4.01
2782 2890 9.582648 AAGTAACTAAATTTTTCCTAGGAGCAA 57.417 29.630 12.26 9.26 0.00 3.91
2841 2949 5.950965 TTTCGAAATAGCGTTTGCAAAAA 57.049 30.435 14.67 0.19 46.23 1.94
2842 2950 7.804614 ATATTTCGAAATAGCGTTTGCAAAA 57.195 28.000 28.80 9.54 46.23 2.44
2843 2951 7.165154 GCTATATTTCGAAATAGCGTTTGCAAA 59.835 33.333 28.80 8.05 46.23 3.68
2844 2952 6.631238 GCTATATTTCGAAATAGCGTTTGCAA 59.369 34.615 28.80 10.17 46.23 4.08
2845 2953 6.133392 GCTATATTTCGAAATAGCGTTTGCA 58.867 36.000 28.80 10.82 46.23 4.08
2846 2954 6.583650 GCTATATTTCGAAATAGCGTTTGC 57.416 37.500 28.80 21.38 40.71 3.68
2854 2962 8.804743 GCTAATAGCGTGCTATATTTCGAAATA 58.195 33.333 27.82 27.82 38.20 1.40
2855 2963 7.676393 GCTAATAGCGTGCTATATTTCGAAAT 58.324 34.615 25.48 25.48 38.20 2.17
2856 2964 7.045725 GCTAATAGCGTGCTATATTTCGAAA 57.954 36.000 13.91 13.91 38.20 3.46
2857 2965 6.627690 GCTAATAGCGTGCTATATTTCGAA 57.372 37.500 14.33 0.00 38.20 3.71
2872 2980 3.673809 ACAAGTTATAGCGCGCTAATAGC 59.326 43.478 40.90 30.23 38.02 2.97
2873 2981 4.680110 ACACAAGTTATAGCGCGCTAATAG 59.320 41.667 40.90 27.66 31.73 1.73
2874 2982 4.613944 ACACAAGTTATAGCGCGCTAATA 58.386 39.130 40.90 28.70 31.73 0.98
2875 2983 3.454375 ACACAAGTTATAGCGCGCTAAT 58.546 40.909 40.90 29.53 31.73 1.73
2876 2984 2.883574 ACACAAGTTATAGCGCGCTAA 58.116 42.857 40.90 27.16 31.73 3.09
2877 2985 2.572191 ACACAAGTTATAGCGCGCTA 57.428 45.000 39.72 39.72 0.00 4.26
2878 2986 2.460918 CTACACAAGTTATAGCGCGCT 58.539 47.619 38.01 38.01 0.00 5.92
2879 2987 1.071436 GCTACACAAGTTATAGCGCGC 60.071 52.381 26.66 26.66 32.61 6.86
2880 2988 2.190161 TGCTACACAAGTTATAGCGCG 58.810 47.619 0.00 0.00 43.53 6.86
2881 2989 4.795970 AATGCTACACAAGTTATAGCGC 57.204 40.909 0.00 0.00 43.53 5.92
2882 2990 5.293324 TCCAAATGCTACACAAGTTATAGCG 59.707 40.000 8.10 0.00 43.53 4.26
2883 2991 6.538742 TCTCCAAATGCTACACAAGTTATAGC 59.461 38.462 6.38 6.38 41.44 2.97
2884 2992 8.492673 TTCTCCAAATGCTACACAAGTTATAG 57.507 34.615 0.00 0.00 0.00 1.31
2885 2993 7.552687 CCTTCTCCAAATGCTACACAAGTTATA 59.447 37.037 0.00 0.00 0.00 0.98
2886 2994 6.375455 CCTTCTCCAAATGCTACACAAGTTAT 59.625 38.462 0.00 0.00 0.00 1.89
2887 2995 5.705441 CCTTCTCCAAATGCTACACAAGTTA 59.295 40.000 0.00 0.00 0.00 2.24
2888 2996 4.520492 CCTTCTCCAAATGCTACACAAGTT 59.480 41.667 0.00 0.00 0.00 2.66
2889 2997 4.074970 CCTTCTCCAAATGCTACACAAGT 58.925 43.478 0.00 0.00 0.00 3.16
2890 2998 3.441572 CCCTTCTCCAAATGCTACACAAG 59.558 47.826 0.00 0.00 0.00 3.16
2891 2999 3.420893 CCCTTCTCCAAATGCTACACAA 58.579 45.455 0.00 0.00 0.00 3.33
2892 3000 2.879756 GCCCTTCTCCAAATGCTACACA 60.880 50.000 0.00 0.00 0.00 3.72
2893 3001 1.745653 GCCCTTCTCCAAATGCTACAC 59.254 52.381 0.00 0.00 0.00 2.90
2894 3002 1.340991 GGCCCTTCTCCAAATGCTACA 60.341 52.381 0.00 0.00 0.00 2.74
2895 3003 1.064389 AGGCCCTTCTCCAAATGCTAC 60.064 52.381 0.00 0.00 0.00 3.58
2896 3004 1.212935 GAGGCCCTTCTCCAAATGCTA 59.787 52.381 0.00 0.00 0.00 3.49
2897 3005 0.033699 GAGGCCCTTCTCCAAATGCT 60.034 55.000 0.00 0.00 0.00 3.79
2898 3006 1.379642 CGAGGCCCTTCTCCAAATGC 61.380 60.000 0.00 0.00 0.00 3.56
2899 3007 1.379642 GCGAGGCCCTTCTCCAAATG 61.380 60.000 0.00 0.00 0.00 2.32
2900 3008 1.077429 GCGAGGCCCTTCTCCAAAT 60.077 57.895 0.00 0.00 0.00 2.32
2901 3009 0.907704 TAGCGAGGCCCTTCTCCAAA 60.908 55.000 0.00 0.00 0.00 3.28
2902 3010 0.691078 ATAGCGAGGCCCTTCTCCAA 60.691 55.000 0.00 0.00 0.00 3.53
2903 3011 0.187606 TATAGCGAGGCCCTTCTCCA 59.812 55.000 0.00 0.00 0.00 3.86
2904 3012 1.562783 ATATAGCGAGGCCCTTCTCC 58.437 55.000 0.00 0.00 0.00 3.71
2905 3013 3.686916 AAATATAGCGAGGCCCTTCTC 57.313 47.619 0.00 0.00 0.00 2.87
2906 3014 3.136626 ACAAAATATAGCGAGGCCCTTCT 59.863 43.478 0.00 0.00 0.00 2.85
2907 3015 3.477530 ACAAAATATAGCGAGGCCCTTC 58.522 45.455 0.00 0.00 0.00 3.46
2908 3016 3.577805 ACAAAATATAGCGAGGCCCTT 57.422 42.857 0.00 0.00 0.00 3.95
2909 3017 3.557264 GCTACAAAATATAGCGAGGCCCT 60.557 47.826 0.00 0.00 36.02 5.19
2910 3018 2.742589 GCTACAAAATATAGCGAGGCCC 59.257 50.000 0.00 0.00 36.02 5.80
2917 3025 4.842139 ATAGCGCGCTACAAAATATAGC 57.158 40.909 40.42 2.19 41.43 2.97
2940 3048 7.909641 CACACAGCATATATGATCAACGAAAAA 59.090 33.333 17.10 0.00 0.00 1.94
2941 3049 7.065683 ACACACAGCATATATGATCAACGAAAA 59.934 33.333 17.10 0.00 0.00 2.29
2942 3050 6.538381 ACACACAGCATATATGATCAACGAAA 59.462 34.615 17.10 0.00 0.00 3.46
2943 3051 6.048509 ACACACAGCATATATGATCAACGAA 58.951 36.000 17.10 0.00 0.00 3.85
2944 3052 5.600696 ACACACAGCATATATGATCAACGA 58.399 37.500 17.10 0.00 0.00 3.85
2945 3053 5.912360 ACACACAGCATATATGATCAACG 57.088 39.130 17.10 0.76 0.00 4.10
2946 3054 7.128331 GTCAACACACAGCATATATGATCAAC 58.872 38.462 17.10 0.00 0.00 3.18
2947 3055 6.822676 TGTCAACACACAGCATATATGATCAA 59.177 34.615 17.10 0.00 0.00 2.57
2948 3056 6.347696 TGTCAACACACAGCATATATGATCA 58.652 36.000 17.10 0.00 0.00 2.92
2949 3057 6.849588 TGTCAACACACAGCATATATGATC 57.150 37.500 17.10 0.00 0.00 2.92
2950 3058 6.038603 GGTTGTCAACACACAGCATATATGAT 59.961 38.462 17.10 7.36 29.76 2.45
2951 3059 5.353956 GGTTGTCAACACACAGCATATATGA 59.646 40.000 17.10 0.00 29.76 2.15
2952 3060 5.449041 GGGTTGTCAACACACAGCATATATG 60.449 44.000 17.29 8.45 34.08 1.78
2953 3061 4.640201 GGGTTGTCAACACACAGCATATAT 59.360 41.667 17.29 0.00 34.08 0.86
2954 3062 4.006989 GGGTTGTCAACACACAGCATATA 58.993 43.478 17.29 0.00 34.08 0.86
2955 3063 2.819608 GGGTTGTCAACACACAGCATAT 59.180 45.455 17.29 0.00 34.08 1.78
2956 3064 2.226330 GGGTTGTCAACACACAGCATA 58.774 47.619 17.29 0.00 34.08 3.14
2957 3065 1.032014 GGGTTGTCAACACACAGCAT 58.968 50.000 17.29 0.00 34.08 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.