Multiple sequence alignment - TraesCS7B01G498400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G498400 chr7B 100.000 3029 0 0 1 3029 749330636 749333664 0.000000e+00 5594.0
1 TraesCS7B01G498400 chr7B 95.048 1454 53 6 924 2359 747942341 747943793 0.000000e+00 2268.0
2 TraesCS7B01G498400 chr7B 99.087 219 2 0 430 648 747942088 747942306 7.870000e-106 394.0
3 TraesCS7B01G498400 chr7B 89.769 303 25 6 2258 2559 743216774 743216477 1.700000e-102 383.0
4 TraesCS7B01G498400 chr7B 94.330 194 10 1 2660 2853 493228644 493228452 2.280000e-76 296.0
5 TraesCS7B01G498400 chr7B 90.610 213 19 1 665 877 389308595 389308384 6.390000e-72 281.0
6 TraesCS7B01G498400 chr7B 94.611 167 9 0 1 167 747941767 747941933 3.000000e-65 259.0
7 TraesCS7B01G498400 chr7B 98.450 129 2 0 1 129 747939502 747939630 8.450000e-56 228.0
8 TraesCS7B01G498400 chr7B 96.226 106 3 1 208 312 747941928 747942033 4.010000e-39 172.0
9 TraesCS7B01G498400 chr7B 96.923 65 2 0 330 394 747942026 747942090 3.190000e-20 110.0
10 TraesCS7B01G498400 chr6B 83.746 1009 107 34 1049 2011 213151678 213150681 0.000000e+00 902.0
11 TraesCS7B01G498400 chr6B 87.470 415 51 1 1586 2000 213307479 213307066 7.600000e-131 477.0
12 TraesCS7B01G498400 chr6B 83.665 502 56 13 1065 1543 213308240 213307742 1.660000e-122 449.0
13 TraesCS7B01G498400 chr6B 92.233 206 15 1 664 869 240299754 240299958 1.060000e-74 291.0
14 TraesCS7B01G498400 chr6B 91.304 207 17 1 663 869 714078863 714078658 6.390000e-72 281.0
15 TraesCS7B01G498400 chr7D 90.663 664 59 2 1375 2035 631729265 631728602 0.000000e+00 880.0
16 TraesCS7B01G498400 chr7D 82.353 1020 132 28 1050 2022 78262619 78263637 0.000000e+00 843.0
17 TraesCS7B01G498400 chr7D 89.552 335 23 11 2228 2559 631728167 631727842 6.040000e-112 414.0
18 TraesCS7B01G498400 chr7D 89.825 285 9 4 1095 1379 631734793 631735057 6.220000e-92 348.0
19 TraesCS7B01G498400 chr7D 93.158 190 11 2 2665 2853 625602141 625601953 8.270000e-71 278.0
20 TraesCS7B01G498400 chr6D 81.930 974 126 27 1085 2011 121300932 121299962 0.000000e+00 778.0
21 TraesCS7B01G498400 chr6D 83.294 419 55 8 1049 1452 121089468 121089050 3.690000e-99 372.0
22 TraesCS7B01G498400 chr6D 93.048 187 11 2 2668 2853 5331329 5331514 3.850000e-69 272.0
23 TraesCS7B01G498400 chr6D 86.441 59 8 0 1456 1514 14510524 14510582 7.010000e-07 65.8
24 TraesCS7B01G498400 chr1B 77.947 984 171 36 1051 2006 606306602 606305637 9.420000e-160 573.0
25 TraesCS7B01G498400 chr1B 97.238 181 5 0 2849 3029 414144087 414144267 1.050000e-79 307.0
26 TraesCS7B01G498400 chr1B 96.133 181 7 0 2849 3029 414145507 414145687 2.280000e-76 296.0
27 TraesCS7B01G498400 chr1B 95.028 181 9 0 2849 3029 414157303 414157483 4.940000e-73 285.0
28 TraesCS7B01G498400 chr1B 91.710 193 15 1 2661 2853 16775083 16775274 1.790000e-67 267.0
29 TraesCS7B01G498400 chr1D 77.456 967 179 25 1064 2004 445188170 445187217 2.660000e-150 542.0
30 TraesCS7B01G498400 chr1D 92.632 190 12 2 2665 2853 461750639 461750451 3.850000e-69 272.0
31 TraesCS7B01G498400 chr1D 75.000 228 51 6 1110 1334 464029964 464029740 1.920000e-17 100.0
32 TraesCS7B01G498400 chr6A 82.339 436 62 6 1055 1475 158409085 158409520 6.170000e-97 364.0
33 TraesCS7B01G498400 chr6A 85.231 325 47 1 1653 1977 158349925 158350248 1.740000e-87 333.0
34 TraesCS7B01G498400 chr6A 86.441 59 8 0 1456 1514 15875354 15875296 7.010000e-07 65.8
35 TraesCS7B01G498400 chr2A 92.718 206 14 1 665 870 34653017 34652813 2.280000e-76 296.0
36 TraesCS7B01G498400 chr5B 91.509 212 17 1 665 876 315894973 315894763 1.060000e-74 291.0
37 TraesCS7B01G498400 chr2D 95.082 183 7 1 2849 3029 20357399 20357581 1.370000e-73 287.0
38 TraesCS7B01G498400 chr3B 91.707 205 16 1 665 869 628103940 628104143 1.780000e-72 283.0
39 TraesCS7B01G498400 chr3B 91.707 205 15 2 665 869 825530002 825530204 1.780000e-72 283.0
40 TraesCS7B01G498400 chrUn 91.304 207 17 1 663 869 374428009 374427804 6.390000e-72 281.0
41 TraesCS7B01G498400 chr3A 94.475 181 10 0 2849 3029 731516599 731516779 2.300000e-71 279.0
42 TraesCS7B01G498400 chr3A 93.923 181 11 0 2849 3029 731515174 731515354 1.070000e-69 274.0
43 TraesCS7B01G498400 chr2B 90.566 212 19 1 665 876 500705130 500705340 2.300000e-71 279.0
44 TraesCS7B01G498400 chr1A 86.957 184 22 1 2848 3029 461242521 461242704 3.960000e-49 206.0
45 TraesCS7B01G498400 chr4A 82.990 194 11 5 2660 2853 130338012 130337841 4.040000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G498400 chr7B 749330636 749333664 3028 False 5594.000000 5594 100.000000 1 3029 1 chr7B.!!$F1 3028
1 TraesCS7B01G498400 chr7B 747939502 747943793 4291 False 571.833333 2268 96.724167 1 2359 6 chr7B.!!$F2 2358
2 TraesCS7B01G498400 chr6B 213150681 213151678 997 True 902.000000 902 83.746000 1049 2011 1 chr6B.!!$R1 962
3 TraesCS7B01G498400 chr6B 213307066 213308240 1174 True 463.000000 477 85.567500 1065 2000 2 chr6B.!!$R3 935
4 TraesCS7B01G498400 chr7D 78262619 78263637 1018 False 843.000000 843 82.353000 1050 2022 1 chr7D.!!$F1 972
5 TraesCS7B01G498400 chr7D 631727842 631729265 1423 True 647.000000 880 90.107500 1375 2559 2 chr7D.!!$R2 1184
6 TraesCS7B01G498400 chr6D 121299962 121300932 970 True 778.000000 778 81.930000 1085 2011 1 chr6D.!!$R2 926
7 TraesCS7B01G498400 chr1B 606305637 606306602 965 True 573.000000 573 77.947000 1051 2006 1 chr1B.!!$R1 955
8 TraesCS7B01G498400 chr1B 414144087 414145687 1600 False 301.500000 307 96.685500 2849 3029 2 chr1B.!!$F3 180
9 TraesCS7B01G498400 chr1D 445187217 445188170 953 True 542.000000 542 77.456000 1064 2004 1 chr1D.!!$R1 940
10 TraesCS7B01G498400 chr3A 731515174 731516779 1605 False 276.500000 279 94.199000 2849 3029 2 chr3A.!!$F1 180

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 3223 0.038526 AAAGGACGTGTCGGCTACAG 60.039 55.0 0.0 0.0 39.29 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2657 5469 0.032267 GCTCACGTCCAGGTATAGCC 59.968 60.0 0.0 0.0 37.58 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 6.212235 AGATAGATGTGCGTTACTCTCAATG 58.788 40.000 0.00 0.00 0.00 2.82
134 2400 4.237445 CTGGCCTCAATGCTCCAG 57.763 61.111 3.32 0.00 39.95 3.86
136 2402 0.747283 CTGGCCTCAATGCTCCAGAC 60.747 60.000 3.32 0.00 46.80 3.51
193 2459 6.631962 AGATAAGTGTGTAGTAGTTTCTGGC 58.368 40.000 0.00 0.00 0.00 4.85
194 2460 4.957684 AAGTGTGTAGTAGTTTCTGGCT 57.042 40.909 0.00 0.00 0.00 4.75
195 2461 4.957684 AGTGTGTAGTAGTTTCTGGCTT 57.042 40.909 0.00 0.00 0.00 4.35
196 2462 6.415206 AAGTGTGTAGTAGTTTCTGGCTTA 57.585 37.500 0.00 0.00 0.00 3.09
197 2463 6.607004 AGTGTGTAGTAGTTTCTGGCTTAT 57.393 37.500 0.00 0.00 0.00 1.73
198 2464 7.005709 AGTGTGTAGTAGTTTCTGGCTTATT 57.994 36.000 0.00 0.00 0.00 1.40
199 2465 6.874134 AGTGTGTAGTAGTTTCTGGCTTATTG 59.126 38.462 0.00 0.00 0.00 1.90
200 2466 6.872020 GTGTGTAGTAGTTTCTGGCTTATTGA 59.128 38.462 0.00 0.00 0.00 2.57
201 2467 7.549488 GTGTGTAGTAGTTTCTGGCTTATTGAT 59.451 37.037 0.00 0.00 0.00 2.57
202 2468 7.549134 TGTGTAGTAGTTTCTGGCTTATTGATG 59.451 37.037 0.00 0.00 0.00 3.07
203 2469 7.011482 GTGTAGTAGTTTCTGGCTTATTGATGG 59.989 40.741 0.00 0.00 0.00 3.51
204 2470 4.884164 AGTAGTTTCTGGCTTATTGATGGC 59.116 41.667 0.00 0.00 0.00 4.40
205 2471 3.973425 AGTTTCTGGCTTATTGATGGCT 58.027 40.909 0.00 0.00 0.00 4.75
206 2472 3.950395 AGTTTCTGGCTTATTGATGGCTC 59.050 43.478 0.00 0.00 0.00 4.70
207 2473 3.650281 TTCTGGCTTATTGATGGCTCA 57.350 42.857 0.00 0.00 0.00 4.26
208 2474 3.870538 TCTGGCTTATTGATGGCTCAT 57.129 42.857 0.00 0.00 0.00 2.90
209 2475 3.483421 TCTGGCTTATTGATGGCTCATG 58.517 45.455 0.00 0.00 0.00 3.07
210 2476 3.117776 TCTGGCTTATTGATGGCTCATGT 60.118 43.478 0.00 0.00 0.00 3.21
211 2477 3.634504 TGGCTTATTGATGGCTCATGTT 58.365 40.909 0.00 0.00 0.00 2.71
212 2478 4.790937 TGGCTTATTGATGGCTCATGTTA 58.209 39.130 0.00 0.00 0.00 2.41
253 2519 4.224818 GGCAGAGATATATCTTGGCCTCTT 59.775 45.833 31.60 7.81 45.32 2.85
299 2565 4.074526 GTCTGCCTCGCCAGCTCA 62.075 66.667 0.00 0.00 32.87 4.26
305 2571 2.811317 CTCGCCAGCTCAACCGAC 60.811 66.667 0.00 0.00 0.00 4.79
306 2572 4.717629 TCGCCAGCTCAACCGACG 62.718 66.667 0.00 0.00 0.00 5.12
309 2575 3.114616 CCAGCTCAACCGACGCAG 61.115 66.667 0.00 0.00 0.00 5.18
310 2576 3.782244 CAGCTCAACCGACGCAGC 61.782 66.667 0.00 0.00 0.00 5.25
311 2577 3.996124 AGCTCAACCGACGCAGCT 61.996 61.111 3.76 3.76 37.40 4.24
312 2578 3.782244 GCTCAACCGACGCAGCTG 61.782 66.667 10.11 10.11 0.00 4.24
313 2579 3.114616 CTCAACCGACGCAGCTGG 61.115 66.667 17.12 8.27 0.00 4.85
314 2580 4.680237 TCAACCGACGCAGCTGGG 62.680 66.667 27.57 27.57 0.00 4.45
315 2581 4.680237 CAACCGACGCAGCTGGGA 62.680 66.667 34.63 0.00 0.00 4.37
316 2582 4.681978 AACCGACGCAGCTGGGAC 62.682 66.667 34.63 27.19 0.00 4.46
321 2587 4.057428 ACGCAGCTGGGACGTCTC 62.057 66.667 34.63 12.99 34.35 3.36
322 2588 4.803426 CGCAGCTGGGACGTCTCC 62.803 72.222 25.55 14.14 35.50 3.71
323 2589 3.386237 GCAGCTGGGACGTCTCCT 61.386 66.667 17.12 0.00 36.68 3.69
324 2590 2.052690 GCAGCTGGGACGTCTCCTA 61.053 63.158 17.12 0.00 36.68 2.94
325 2591 2.010582 GCAGCTGGGACGTCTCCTAG 62.011 65.000 17.12 7.67 46.01 3.02
327 2593 4.668151 CTGGGACGTCTCCTAGCT 57.332 61.111 14.10 0.00 38.27 3.32
328 2594 2.889200 CTGGGACGTCTCCTAGCTT 58.111 57.895 14.10 0.00 38.27 3.74
381 2647 0.326595 TTCGCCAGCTGGGACATTTA 59.673 50.000 33.46 11.03 40.01 1.40
389 2655 3.129287 CAGCTGGGACATTTATTGACACC 59.871 47.826 5.57 0.00 38.20 4.16
391 2657 3.701040 GCTGGGACATTTATTGACACCAT 59.299 43.478 0.00 0.00 38.20 3.55
392 2658 4.887071 GCTGGGACATTTATTGACACCATA 59.113 41.667 0.00 0.00 38.20 2.74
393 2659 5.221048 GCTGGGACATTTATTGACACCATAC 60.221 44.000 0.00 0.00 38.20 2.39
394 2660 5.821097 TGGGACATTTATTGACACCATACA 58.179 37.500 0.00 0.00 0.00 2.29
395 2661 6.249192 TGGGACATTTATTGACACCATACAA 58.751 36.000 0.00 0.00 0.00 2.41
396 2662 6.721668 TGGGACATTTATTGACACCATACAAA 59.278 34.615 0.00 0.00 0.00 2.83
397 2663 7.398618 TGGGACATTTATTGACACCATACAAAT 59.601 33.333 0.00 0.00 0.00 2.32
398 2664 7.706179 GGGACATTTATTGACACCATACAAATG 59.294 37.037 0.00 0.00 37.71 2.32
399 2665 8.250332 GGACATTTATTGACACCATACAAATGT 58.750 33.333 8.94 8.94 43.83 2.71
405 2671 9.679661 TTATTGACACCATACAAATGTAGATGT 57.320 29.630 0.00 3.74 33.52 3.06
406 2672 7.994425 TTGACACCATACAAATGTAGATGTT 57.006 32.000 0.00 0.00 33.52 2.71
407 2673 7.994425 TGACACCATACAAATGTAGATGTTT 57.006 32.000 0.00 0.00 33.52 2.83
408 2674 9.508642 TTGACACCATACAAATGTAGATGTTTA 57.491 29.630 0.00 0.00 33.52 2.01
409 2675 8.941977 TGACACCATACAAATGTAGATGTTTAC 58.058 33.333 0.00 0.00 33.52 2.01
410 2676 8.856153 ACACCATACAAATGTAGATGTTTACA 57.144 30.769 0.00 0.00 37.89 2.41
411 2677 9.461312 ACACCATACAAATGTAGATGTTTACAT 57.539 29.630 0.00 0.00 44.08 2.29
426 2692 8.934697 AGATGTTTACATACATGTACATACCCT 58.065 33.333 7.96 0.01 42.48 4.34
427 2693 9.204570 GATGTTTACATACATGTACATACCCTC 57.795 37.037 7.96 0.00 42.48 4.30
428 2694 7.502696 TGTTTACATACATGTACATACCCTCC 58.497 38.462 7.96 0.00 42.48 4.30
458 2724 4.553756 TTCGAGATCTCATACCGAACAG 57.446 45.455 22.31 2.34 34.83 3.16
657 2923 6.036735 TGTTTCAACTAGTAATATTGAGCGCC 59.963 38.462 2.29 0.00 34.04 6.53
658 2924 5.531122 TCAACTAGTAATATTGAGCGCCT 57.469 39.130 2.29 0.00 0.00 5.52
659 2925 5.529791 TCAACTAGTAATATTGAGCGCCTC 58.470 41.667 2.29 1.22 0.00 4.70
663 2929 7.228314 ACTAGTAATATTGAGCGCCTCATAA 57.772 36.000 2.29 0.00 40.39 1.90
664 2930 7.841956 ACTAGTAATATTGAGCGCCTCATAAT 58.158 34.615 2.29 1.78 40.39 1.28
665 2931 8.314751 ACTAGTAATATTGAGCGCCTCATAATT 58.685 33.333 2.29 11.71 40.39 1.40
666 2932 9.803315 CTAGTAATATTGAGCGCCTCATAATTA 57.197 33.333 2.29 10.85 40.39 1.40
668 2934 9.502091 AGTAATATTGAGCGCCTCATAATTAAA 57.498 29.630 2.29 0.00 40.39 1.52
672 2938 7.935338 ATTGAGCGCCTCATAATTAAATTTG 57.065 32.000 2.29 0.00 40.39 2.32
673 2939 5.280945 TGAGCGCCTCATAATTAAATTTGC 58.719 37.500 2.29 0.00 35.39 3.68
674 2940 4.290155 AGCGCCTCATAATTAAATTTGCG 58.710 39.130 2.29 5.22 42.11 4.85
675 2941 4.041723 GCGCCTCATAATTAAATTTGCGT 58.958 39.130 13.08 0.00 41.34 5.24
676 2942 4.085619 GCGCCTCATAATTAAATTTGCGTG 60.086 41.667 13.08 1.69 41.34 5.34
677 2943 4.085619 CGCCTCATAATTAAATTTGCGTGC 60.086 41.667 0.00 0.00 35.22 5.34
678 2944 4.085619 GCCTCATAATTAAATTTGCGTGCG 60.086 41.667 0.00 0.00 0.00 5.34
679 2945 5.034152 CCTCATAATTAAATTTGCGTGCGT 58.966 37.500 0.00 0.00 0.00 5.24
680 2946 5.514914 CCTCATAATTAAATTTGCGTGCGTT 59.485 36.000 0.00 0.00 0.00 4.84
681 2947 6.034470 CCTCATAATTAAATTTGCGTGCGTTT 59.966 34.615 0.00 0.00 0.00 3.60
682 2948 7.339732 TCATAATTAAATTTGCGTGCGTTTT 57.660 28.000 0.00 0.00 0.00 2.43
683 2949 7.788055 TCATAATTAAATTTGCGTGCGTTTTT 58.212 26.923 0.00 0.00 0.00 1.94
684 2950 8.912658 TCATAATTAAATTTGCGTGCGTTTTTA 58.087 25.926 0.00 0.00 0.00 1.52
685 2951 8.970553 CATAATTAAATTTGCGTGCGTTTTTAC 58.029 29.630 0.00 0.00 0.00 2.01
686 2952 5.944049 TTAAATTTGCGTGCGTTTTTACA 57.056 30.435 0.00 0.00 0.00 2.41
687 2953 4.842139 AAATTTGCGTGCGTTTTTACAA 57.158 31.818 0.00 0.00 0.00 2.41
688 2954 5.396750 AAATTTGCGTGCGTTTTTACAAT 57.603 30.435 0.00 0.00 0.00 2.71
689 2955 6.512177 AAATTTGCGTGCGTTTTTACAATA 57.488 29.167 0.00 0.00 0.00 1.90
690 2956 5.739237 ATTTGCGTGCGTTTTTACAATAG 57.261 34.783 0.00 0.00 0.00 1.73
691 2957 4.469625 TTGCGTGCGTTTTTACAATAGA 57.530 36.364 0.00 0.00 0.00 1.98
692 2958 3.801293 TGCGTGCGTTTTTACAATAGAC 58.199 40.909 0.00 0.00 0.00 2.59
693 2959 3.247886 TGCGTGCGTTTTTACAATAGACA 59.752 39.130 0.00 0.00 0.00 3.41
694 2960 4.212911 GCGTGCGTTTTTACAATAGACAA 58.787 39.130 0.00 0.00 0.00 3.18
695 2961 4.317291 GCGTGCGTTTTTACAATAGACAAG 59.683 41.667 0.00 0.00 0.00 3.16
696 2962 4.843984 CGTGCGTTTTTACAATAGACAAGG 59.156 41.667 0.00 0.00 0.00 3.61
697 2963 5.559417 CGTGCGTTTTTACAATAGACAAGGT 60.559 40.000 0.00 0.00 0.00 3.50
698 2964 6.203647 GTGCGTTTTTACAATAGACAAGGTT 58.796 36.000 0.00 0.00 0.00 3.50
699 2965 6.693978 GTGCGTTTTTACAATAGACAAGGTTT 59.306 34.615 0.00 0.00 0.00 3.27
700 2966 7.856894 GTGCGTTTTTACAATAGACAAGGTTTA 59.143 33.333 0.00 0.00 0.00 2.01
701 2967 8.071368 TGCGTTTTTACAATAGACAAGGTTTAG 58.929 33.333 0.00 0.00 0.00 1.85
702 2968 7.536281 GCGTTTTTACAATAGACAAGGTTTAGG 59.464 37.037 0.00 0.00 0.00 2.69
703 2969 8.019094 CGTTTTTACAATAGACAAGGTTTAGGG 58.981 37.037 0.00 0.00 0.00 3.53
704 2970 7.457024 TTTTACAATAGACAAGGTTTAGGGC 57.543 36.000 0.00 0.00 0.00 5.19
705 2971 3.606687 ACAATAGACAAGGTTTAGGGCG 58.393 45.455 0.00 0.00 0.00 6.13
706 2972 2.943033 CAATAGACAAGGTTTAGGGCGG 59.057 50.000 0.00 0.00 0.00 6.13
707 2973 1.941377 TAGACAAGGTTTAGGGCGGA 58.059 50.000 0.00 0.00 0.00 5.54
708 2974 1.286248 AGACAAGGTTTAGGGCGGAT 58.714 50.000 0.00 0.00 0.00 4.18
709 2975 1.633945 AGACAAGGTTTAGGGCGGATT 59.366 47.619 0.00 0.00 0.00 3.01
710 2976 1.743394 GACAAGGTTTAGGGCGGATTG 59.257 52.381 0.00 0.00 0.00 2.67
711 2977 0.455815 CAAGGTTTAGGGCGGATTGC 59.544 55.000 0.00 0.00 45.38 3.56
727 2993 6.080406 GCGGATTGCATTTATTTCTAGTAGC 58.920 40.000 0.00 0.00 45.45 3.58
728 2994 6.073003 GCGGATTGCATTTATTTCTAGTAGCT 60.073 38.462 0.00 0.00 45.45 3.32
729 2995 7.117812 GCGGATTGCATTTATTTCTAGTAGCTA 59.882 37.037 0.00 0.00 45.45 3.32
730 2996 8.988934 CGGATTGCATTTATTTCTAGTAGCTAA 58.011 33.333 0.00 0.00 0.00 3.09
772 3038 9.803315 ACTATTCCTATATGCATACGTAATGTG 57.197 33.333 8.99 0.00 37.93 3.21
775 3041 9.890629 ATTCCTATATGCATACGTAATGTGAAT 57.109 29.630 8.99 6.43 37.93 2.57
776 3042 8.702163 TCCTATATGCATACGTAATGTGAATG 57.298 34.615 8.99 0.00 37.93 2.67
777 3043 7.277760 TCCTATATGCATACGTAATGTGAATGC 59.722 37.037 8.99 9.68 41.12 3.56
778 3044 7.278646 CCTATATGCATACGTAATGTGAATGCT 59.721 37.037 8.99 6.59 41.25 3.79
779 3045 9.301153 CTATATGCATACGTAATGTGAATGCTA 57.699 33.333 8.99 8.14 41.25 3.49
780 3046 8.722480 ATATGCATACGTAATGTGAATGCTAT 57.278 30.769 8.99 10.94 41.25 2.97
781 3047 6.859420 TGCATACGTAATGTGAATGCTATT 57.141 33.333 15.86 0.00 41.25 1.73
782 3048 7.258022 TGCATACGTAATGTGAATGCTATTT 57.742 32.000 15.86 0.00 41.25 1.40
783 3049 7.702386 TGCATACGTAATGTGAATGCTATTTT 58.298 30.769 15.86 0.00 41.25 1.82
784 3050 8.187480 TGCATACGTAATGTGAATGCTATTTTT 58.813 29.630 15.86 0.00 41.25 1.94
802 3068 4.871871 TTTTTAGCCCATCCCATAGTCA 57.128 40.909 0.00 0.00 0.00 3.41
803 3069 4.871871 TTTTAGCCCATCCCATAGTCAA 57.128 40.909 0.00 0.00 0.00 3.18
804 3070 5.402054 TTTTAGCCCATCCCATAGTCAAT 57.598 39.130 0.00 0.00 0.00 2.57
805 3071 6.523035 TTTTAGCCCATCCCATAGTCAATA 57.477 37.500 0.00 0.00 0.00 1.90
806 3072 5.762179 TTAGCCCATCCCATAGTCAATAG 57.238 43.478 0.00 0.00 0.00 1.73
807 3073 3.874316 AGCCCATCCCATAGTCAATAGA 58.126 45.455 0.00 0.00 0.00 1.98
808 3074 4.442707 AGCCCATCCCATAGTCAATAGAT 58.557 43.478 0.00 0.00 0.00 1.98
809 3075 5.603750 AGCCCATCCCATAGTCAATAGATA 58.396 41.667 0.00 0.00 0.00 1.98
810 3076 6.032039 AGCCCATCCCATAGTCAATAGATAA 58.968 40.000 0.00 0.00 0.00 1.75
811 3077 6.069963 AGCCCATCCCATAGTCAATAGATAAC 60.070 42.308 0.00 0.00 0.00 1.89
812 3078 6.653989 CCCATCCCATAGTCAATAGATAACC 58.346 44.000 0.00 0.00 0.00 2.85
813 3079 6.215431 CCCATCCCATAGTCAATAGATAACCA 59.785 42.308 0.00 0.00 0.00 3.67
814 3080 7.106239 CCATCCCATAGTCAATAGATAACCAC 58.894 42.308 0.00 0.00 0.00 4.16
815 3081 6.681729 TCCCATAGTCAATAGATAACCACC 57.318 41.667 0.00 0.00 0.00 4.61
816 3082 6.390504 TCCCATAGTCAATAGATAACCACCT 58.609 40.000 0.00 0.00 0.00 4.00
817 3083 7.541074 TCCCATAGTCAATAGATAACCACCTA 58.459 38.462 0.00 0.00 0.00 3.08
818 3084 7.674348 TCCCATAGTCAATAGATAACCACCTAG 59.326 40.741 0.00 0.00 0.00 3.02
819 3085 7.093289 CCCATAGTCAATAGATAACCACCTAGG 60.093 44.444 7.41 7.41 45.67 3.02
829 3095 3.957188 CCACCTAGGTCCCAGAGAT 57.043 57.895 12.84 0.00 0.00 2.75
830 3096 2.182516 CCACCTAGGTCCCAGAGATT 57.817 55.000 12.84 0.00 0.00 2.40
831 3097 2.482494 CCACCTAGGTCCCAGAGATTT 58.518 52.381 12.84 0.00 0.00 2.17
832 3098 2.846827 CCACCTAGGTCCCAGAGATTTT 59.153 50.000 12.84 0.00 0.00 1.82
833 3099 3.267031 CCACCTAGGTCCCAGAGATTTTT 59.733 47.826 12.84 0.00 0.00 1.94
834 3100 4.265073 CACCTAGGTCCCAGAGATTTTTG 58.735 47.826 12.84 0.00 0.00 2.44
835 3101 3.282885 CCTAGGTCCCAGAGATTTTTGC 58.717 50.000 0.00 0.00 0.00 3.68
836 3102 2.978156 AGGTCCCAGAGATTTTTGCA 57.022 45.000 0.00 0.00 0.00 4.08
837 3103 3.243359 AGGTCCCAGAGATTTTTGCAA 57.757 42.857 0.00 0.00 0.00 4.08
838 3104 3.160269 AGGTCCCAGAGATTTTTGCAAG 58.840 45.455 0.00 0.00 0.00 4.01
839 3105 2.893489 GGTCCCAGAGATTTTTGCAAGT 59.107 45.455 0.00 0.00 0.00 3.16
840 3106 3.305608 GGTCCCAGAGATTTTTGCAAGTG 60.306 47.826 0.00 0.00 0.00 3.16
841 3107 2.297033 TCCCAGAGATTTTTGCAAGTGC 59.703 45.455 0.00 0.00 42.50 4.40
842 3108 2.322161 CCAGAGATTTTTGCAAGTGCG 58.678 47.619 0.00 0.00 45.83 5.34
843 3109 1.717645 CAGAGATTTTTGCAAGTGCGC 59.282 47.619 0.00 0.00 45.83 6.09
844 3110 1.063031 GAGATTTTTGCAAGTGCGCC 58.937 50.000 4.18 0.00 45.83 6.53
845 3111 0.675633 AGATTTTTGCAAGTGCGCCT 59.324 45.000 4.18 0.00 45.83 5.52
846 3112 1.069049 AGATTTTTGCAAGTGCGCCTT 59.931 42.857 4.18 4.96 45.83 4.35
847 3113 1.456923 GATTTTTGCAAGTGCGCCTTC 59.543 47.619 4.18 3.47 45.83 3.46
848 3114 0.459489 TTTTTGCAAGTGCGCCTTCT 59.541 45.000 4.18 0.00 45.83 2.85
849 3115 1.313772 TTTTGCAAGTGCGCCTTCTA 58.686 45.000 4.18 0.00 45.83 2.10
850 3116 1.313772 TTTGCAAGTGCGCCTTCTAA 58.686 45.000 4.18 2.83 45.83 2.10
851 3117 1.313772 TTGCAAGTGCGCCTTCTAAA 58.686 45.000 4.18 0.00 45.83 1.85
852 3118 0.591170 TGCAAGTGCGCCTTCTAAAC 59.409 50.000 4.18 0.00 45.83 2.01
853 3119 0.109735 GCAAGTGCGCCTTCTAAACC 60.110 55.000 4.18 0.00 0.00 3.27
854 3120 0.165944 CAAGTGCGCCTTCTAAACCG 59.834 55.000 4.18 0.00 0.00 4.44
855 3121 0.250166 AAGTGCGCCTTCTAAACCGT 60.250 50.000 4.18 0.00 0.00 4.83
856 3122 0.949105 AGTGCGCCTTCTAAACCGTG 60.949 55.000 4.18 0.00 0.00 4.94
857 3123 0.947180 GTGCGCCTTCTAAACCGTGA 60.947 55.000 4.18 0.00 0.00 4.35
858 3124 0.947180 TGCGCCTTCTAAACCGTGAC 60.947 55.000 4.18 0.00 0.00 3.67
859 3125 1.952266 GCGCCTTCTAAACCGTGACG 61.952 60.000 0.00 0.00 0.00 4.35
875 3141 5.686159 CGTGACGGAGGAAGTAGTAATAT 57.314 43.478 0.00 0.00 0.00 1.28
876 3142 6.069684 CGTGACGGAGGAAGTAGTAATATT 57.930 41.667 0.00 0.00 0.00 1.28
877 3143 5.913514 CGTGACGGAGGAAGTAGTAATATTG 59.086 44.000 0.00 0.00 0.00 1.90
878 3144 6.238566 CGTGACGGAGGAAGTAGTAATATTGA 60.239 42.308 0.00 0.00 0.00 2.57
879 3145 7.140048 GTGACGGAGGAAGTAGTAATATTGAG 58.860 42.308 0.00 0.00 0.00 3.02
880 3146 6.086785 ACGGAGGAAGTAGTAATATTGAGC 57.913 41.667 0.00 0.00 0.00 4.26
881 3147 5.154932 CGGAGGAAGTAGTAATATTGAGCG 58.845 45.833 0.00 0.00 0.00 5.03
882 3148 4.924462 GGAGGAAGTAGTAATATTGAGCGC 59.076 45.833 0.00 0.00 0.00 5.92
883 3149 4.884247 AGGAAGTAGTAATATTGAGCGCC 58.116 43.478 2.29 0.00 0.00 6.53
884 3150 4.589374 AGGAAGTAGTAATATTGAGCGCCT 59.411 41.667 2.29 0.00 0.00 5.52
885 3151 4.924462 GGAAGTAGTAATATTGAGCGCCTC 59.076 45.833 2.29 1.22 0.00 4.70
886 3152 5.509163 GGAAGTAGTAATATTGAGCGCCTCA 60.509 44.000 2.29 4.38 38.87 3.86
887 3153 5.730296 AGTAGTAATATTGAGCGCCTCAT 57.270 39.130 2.29 0.00 40.39 2.90
888 3154 6.835819 AGTAGTAATATTGAGCGCCTCATA 57.164 37.500 2.29 0.00 40.39 2.15
889 3155 7.228314 AGTAGTAATATTGAGCGCCTCATAA 57.772 36.000 2.29 0.00 40.39 1.90
890 3156 7.841956 AGTAGTAATATTGAGCGCCTCATAAT 58.158 34.615 2.29 1.78 40.39 1.28
891 3157 8.314751 AGTAGTAATATTGAGCGCCTCATAATT 58.685 33.333 2.29 11.71 40.39 1.40
892 3158 9.582431 GTAGTAATATTGAGCGCCTCATAATTA 57.418 33.333 2.29 10.85 40.39 1.40
920 3186 2.657237 GGGCACTAGCACACGAGT 59.343 61.111 0.00 0.00 45.91 4.18
921 3187 1.888018 GGGCACTAGCACACGAGTA 59.112 57.895 0.00 0.00 45.91 2.59
922 3188 0.458025 GGGCACTAGCACACGAGTAC 60.458 60.000 0.00 0.00 45.91 2.73
923 3189 0.797249 GGCACTAGCACACGAGTACG 60.797 60.000 0.00 0.00 44.61 3.67
925 3191 1.129251 GCACTAGCACACGAGTACGTA 59.871 52.381 0.00 0.00 45.47 3.57
926 3192 3.035641 GCACTAGCACACGAGTACGTAC 61.036 54.545 18.10 18.10 45.47 3.67
957 3223 0.038526 AAAGGACGTGTCGGCTACAG 60.039 55.000 0.00 0.00 39.29 2.74
972 3249 2.611518 CTACAGCCAGAACAGCTACAC 58.388 52.381 0.00 0.00 38.95 2.90
1041 3318 4.758251 TCCACGGATGCCTGTGCG 62.758 66.667 0.00 0.00 45.95 5.34
1042 3319 4.758251 CCACGGATGCCTGTGCGA 62.758 66.667 2.10 0.00 45.95 5.10
1432 3736 2.049627 GCCATACTCCCTCCTGCCAG 62.050 65.000 0.00 0.00 0.00 4.85
1637 4172 1.626356 ATATGTGTCAGTGGCCCGCT 61.626 55.000 0.00 0.00 0.00 5.52
1912 4455 1.528129 CTTCTTCAGGAAGGGTGTGC 58.472 55.000 9.03 0.00 45.55 4.57
1938 4481 0.767375 ACTGGAGCAACCACATCACT 59.233 50.000 0.00 0.00 44.64 3.41
2011 4554 1.606994 CGGGATTCACCTTTGACGTCA 60.607 52.381 15.76 15.76 38.98 4.35
2012 4555 2.076863 GGGATTCACCTTTGACGTCAG 58.923 52.381 19.11 10.05 38.98 3.51
2017 4563 1.613925 TCACCTTTGACGTCAGAGAGG 59.386 52.381 31.48 29.83 30.38 3.69
2035 4581 4.833561 CGTCTGCATGAACGCGCG 62.834 66.667 30.96 30.96 33.35 6.86
2043 4701 1.440353 ATGAACGCGCGTTTTCTGC 60.440 52.632 43.77 31.47 38.60 4.26
2087 4752 1.526917 ACTGCTGTGAAGTGCCCAC 60.527 57.895 0.00 0.00 35.23 4.61
2116 4789 2.224161 GGACGATCTCCTCATCCCTTTG 60.224 54.545 0.00 0.00 35.89 2.77
2152 4825 1.593209 GGCACGTTCGTGTGAAGGA 60.593 57.895 22.85 0.00 42.55 3.36
2158 4831 1.521423 CGTTCGTGTGAAGGAGTTGTC 59.479 52.381 0.00 0.00 41.39 3.18
2168 4841 3.195698 GAGTTGTCGGATGGCGCC 61.196 66.667 22.73 22.73 0.00 6.53
2178 4851 1.890979 GATGGCGCCATGAGACCAG 60.891 63.158 44.96 0.00 36.70 4.00
2224 4897 5.220796 GGTTGTAACGAGAATAAGGGAATGC 60.221 44.000 0.00 0.00 0.00 3.56
2234 4907 7.175641 CGAGAATAAGGGAATGCAAGGAAATAT 59.824 37.037 0.00 0.00 0.00 1.28
2282 5093 1.062587 GCCATGTGACTACGATGCAAC 59.937 52.381 0.00 0.00 0.00 4.17
2310 5121 4.970860 ATTGCCATGCTCTAGAGTACAT 57.029 40.909 20.75 13.34 0.00 2.29
2344 5155 7.830099 AATTTGCCATCCTTTCCTAGAATAG 57.170 36.000 0.00 0.00 38.80 1.73
2355 5166 8.213679 TCCTTTCCTAGAATAGAAATGGACATG 58.786 37.037 0.00 0.00 42.77 3.21
2389 5200 2.288961 AACTTACCATGCGACTACGG 57.711 50.000 0.00 0.00 40.15 4.02
2390 5201 0.179119 ACTTACCATGCGACTACGGC 60.179 55.000 0.00 0.00 40.15 5.68
2448 5259 8.869109 ACAAAAATGACTGAATTTTCCATCCTA 58.131 29.630 6.37 0.00 38.49 2.94
2450 5261 8.421249 AAAATGACTGAATTTTCCATCCTACA 57.579 30.769 0.00 0.00 35.33 2.74
2451 5262 7.396540 AATGACTGAATTTTCCATCCTACAC 57.603 36.000 0.00 0.00 0.00 2.90
2452 5263 5.875224 TGACTGAATTTTCCATCCTACACA 58.125 37.500 0.00 0.00 0.00 3.72
2453 5264 6.484288 TGACTGAATTTTCCATCCTACACAT 58.516 36.000 0.00 0.00 0.00 3.21
2544 5356 9.331282 TCAATTTCGTAAAATTTCCATGGTTTT 57.669 25.926 12.58 13.51 41.96 2.43
2561 5373 9.824534 CCATGGTTTTAGAAAAATAAATTGTGC 57.175 29.630 2.57 0.00 0.00 4.57
2562 5374 9.824534 CATGGTTTTAGAAAAATAAATTGTGCC 57.175 29.630 0.00 0.00 0.00 5.01
2563 5375 8.384607 TGGTTTTAGAAAAATAAATTGTGCCC 57.615 30.769 0.00 0.00 0.00 5.36
2564 5376 7.445707 TGGTTTTAGAAAAATAAATTGTGCCCC 59.554 33.333 0.00 0.00 0.00 5.80
2565 5377 7.360522 GGTTTTAGAAAAATAAATTGTGCCCCG 60.361 37.037 0.00 0.00 0.00 5.73
2566 5378 6.591750 TTAGAAAAATAAATTGTGCCCCGA 57.408 33.333 0.00 0.00 0.00 5.14
2567 5379 4.816392 AGAAAAATAAATTGTGCCCCGAC 58.184 39.130 0.00 0.00 0.00 4.79
2568 5380 3.603158 AAAATAAATTGTGCCCCGACC 57.397 42.857 0.00 0.00 0.00 4.79
2569 5381 1.480789 AATAAATTGTGCCCCGACCC 58.519 50.000 0.00 0.00 0.00 4.46
2570 5382 0.333312 ATAAATTGTGCCCCGACCCA 59.667 50.000 0.00 0.00 0.00 4.51
2571 5383 0.609681 TAAATTGTGCCCCGACCCAC 60.610 55.000 0.00 0.00 0.00 4.61
2572 5384 3.879180 AATTGTGCCCCGACCCACC 62.879 63.158 0.00 0.00 0.00 4.61
2575 5387 3.324108 GTGCCCCGACCCACCTTA 61.324 66.667 0.00 0.00 0.00 2.69
2576 5388 2.529643 TGCCCCGACCCACCTTAA 60.530 61.111 0.00 0.00 0.00 1.85
2577 5389 1.926489 TGCCCCGACCCACCTTAAT 60.926 57.895 0.00 0.00 0.00 1.40
2578 5390 1.153025 GCCCCGACCCACCTTAATC 60.153 63.158 0.00 0.00 0.00 1.75
2579 5391 1.145377 CCCCGACCCACCTTAATCG 59.855 63.158 0.00 0.00 0.00 3.34
2581 5393 4.848685 CGACCCACCTTAATCGGG 57.151 61.111 0.00 0.00 46.22 5.14
2582 5394 1.523032 CGACCCACCTTAATCGGGC 60.523 63.158 0.00 0.00 44.49 6.13
2583 5395 1.153025 GACCCACCTTAATCGGGCC 60.153 63.158 0.00 0.00 44.49 5.80
2584 5396 1.618447 ACCCACCTTAATCGGGCCT 60.618 57.895 0.84 0.00 44.49 5.19
2585 5397 1.152963 CCCACCTTAATCGGGCCTG 60.153 63.158 4.71 4.71 31.89 4.85
2586 5398 1.152963 CCACCTTAATCGGGCCTGG 60.153 63.158 12.87 0.00 0.00 4.45
2587 5399 1.823899 CACCTTAATCGGGCCTGGC 60.824 63.158 12.87 11.05 0.00 4.85
2588 5400 2.305607 ACCTTAATCGGGCCTGGCA 61.306 57.895 22.05 0.00 0.00 4.92
2589 5401 1.151450 CCTTAATCGGGCCTGGCAT 59.849 57.895 22.05 2.11 0.00 4.40
2590 5402 1.174712 CCTTAATCGGGCCTGGCATG 61.175 60.000 22.05 12.07 0.00 4.06
2591 5403 1.152777 TTAATCGGGCCTGGCATGG 60.153 57.895 22.05 8.76 0.00 3.66
2603 5415 4.465512 GCATGGCACGGCTCGTTG 62.466 66.667 5.78 0.00 38.32 4.10
2604 5416 3.049674 CATGGCACGGCTCGTTGT 61.050 61.111 0.00 0.00 38.32 3.32
2605 5417 3.049674 ATGGCACGGCTCGTTGTG 61.050 61.111 0.00 0.00 38.32 3.33
2606 5418 3.529341 ATGGCACGGCTCGTTGTGA 62.529 57.895 0.00 0.00 38.32 3.58
2607 5419 3.712881 GGCACGGCTCGTTGTGAC 61.713 66.667 0.00 0.00 38.32 3.67
2608 5420 2.964925 GCACGGCTCGTTGTGACA 60.965 61.111 0.00 0.00 38.32 3.58
2609 5421 2.928361 CACGGCTCGTTGTGACAC 59.072 61.111 0.00 0.00 38.32 3.67
2610 5422 2.657296 ACGGCTCGTTGTGACACG 60.657 61.111 0.22 0.00 36.35 4.49
2611 5423 2.354188 CGGCTCGTTGTGACACGA 60.354 61.111 9.23 9.23 46.81 4.35
2620 5432 3.861113 TCGTTGTGACACGATTATTAGCC 59.139 43.478 0.00 0.00 44.18 3.93
2621 5433 3.301579 CGTTGTGACACGATTATTAGCCG 60.302 47.826 0.00 0.00 43.15 5.52
2622 5434 2.816689 TGTGACACGATTATTAGCCGG 58.183 47.619 0.00 0.00 0.00 6.13
2623 5435 2.132762 GTGACACGATTATTAGCCGGG 58.867 52.381 2.18 0.00 0.00 5.73
2624 5436 1.758280 TGACACGATTATTAGCCGGGT 59.242 47.619 12.58 12.58 43.15 5.28
2625 5437 2.521105 ACACGATTATTAGCCGGGTC 57.479 50.000 10.79 0.00 34.56 4.46
2626 5438 1.269413 ACACGATTATTAGCCGGGTCG 60.269 52.381 10.79 9.31 34.56 4.79
2627 5439 1.035139 ACGATTATTAGCCGGGTCGT 58.965 50.000 10.79 10.09 37.47 4.34
2628 5440 1.269413 ACGATTATTAGCCGGGTCGTG 60.269 52.381 10.79 0.00 40.34 4.35
2629 5441 1.269413 CGATTATTAGCCGGGTCGTGT 60.269 52.381 10.79 0.00 0.00 4.49
2630 5442 2.800629 CGATTATTAGCCGGGTCGTGTT 60.801 50.000 10.79 0.00 0.00 3.32
2631 5443 2.012937 TTATTAGCCGGGTCGTGTTG 57.987 50.000 10.79 0.00 0.00 3.33
2632 5444 0.896923 TATTAGCCGGGTCGTGTTGT 59.103 50.000 10.79 0.00 0.00 3.32
2633 5445 0.672401 ATTAGCCGGGTCGTGTTGTG 60.672 55.000 10.79 0.00 0.00 3.33
2634 5446 3.869473 TAGCCGGGTCGTGTTGTGC 62.869 63.158 10.79 0.00 0.00 4.57
2636 5448 4.920112 CCGGGTCGTGTTGTGCCA 62.920 66.667 0.00 0.00 0.00 4.92
2637 5449 3.345808 CGGGTCGTGTTGTGCCAG 61.346 66.667 0.00 0.00 0.00 4.85
2638 5450 3.660111 GGGTCGTGTTGTGCCAGC 61.660 66.667 0.00 0.00 0.00 4.85
2639 5451 3.660111 GGTCGTGTTGTGCCAGCC 61.660 66.667 0.00 0.00 0.00 4.85
2640 5452 3.660111 GTCGTGTTGTGCCAGCCC 61.660 66.667 0.00 0.00 0.00 5.19
2641 5453 4.182433 TCGTGTTGTGCCAGCCCA 62.182 61.111 0.00 0.00 0.00 5.36
2642 5454 3.964875 CGTGTTGTGCCAGCCCAC 61.965 66.667 0.00 0.00 36.28 4.61
2643 5455 3.964875 GTGTTGTGCCAGCCCACG 61.965 66.667 0.00 0.00 38.55 4.94
2644 5456 4.497984 TGTTGTGCCAGCCCACGT 62.498 61.111 0.00 0.00 38.55 4.49
2645 5457 3.964875 GTTGTGCCAGCCCACGTG 61.965 66.667 9.08 9.08 38.55 4.49
2648 5460 4.697756 GTGCCAGCCCACGTGCTA 62.698 66.667 10.91 0.00 40.32 3.49
2649 5461 3.716195 TGCCAGCCCACGTGCTAT 61.716 61.111 10.91 0.00 40.32 2.97
2650 5462 3.204827 GCCAGCCCACGTGCTATG 61.205 66.667 10.91 7.56 40.32 2.23
2651 5463 2.268920 CCAGCCCACGTGCTATGT 59.731 61.111 10.91 0.00 40.32 2.29
2652 5464 1.815421 CCAGCCCACGTGCTATGTC 60.815 63.158 10.91 0.00 40.32 3.06
2653 5465 1.815421 CAGCCCACGTGCTATGTCC 60.815 63.158 10.91 0.00 40.32 4.02
2654 5466 1.990060 AGCCCACGTGCTATGTCCT 60.990 57.895 10.91 0.00 40.56 3.85
2655 5467 1.521681 GCCCACGTGCTATGTCCTC 60.522 63.158 10.91 0.00 0.00 3.71
2656 5468 1.144057 CCCACGTGCTATGTCCTCC 59.856 63.158 10.91 0.00 0.00 4.30
2657 5469 1.226974 CCACGTGCTATGTCCTCCG 60.227 63.158 10.91 0.00 0.00 4.63
2658 5470 1.226974 CACGTGCTATGTCCTCCGG 60.227 63.158 0.82 0.00 0.00 5.14
2659 5471 2.279517 CGTGCTATGTCCTCCGGC 60.280 66.667 0.00 0.00 0.00 6.13
2660 5472 2.786495 CGTGCTATGTCCTCCGGCT 61.786 63.158 0.00 0.00 0.00 5.52
2661 5473 1.452953 CGTGCTATGTCCTCCGGCTA 61.453 60.000 0.00 0.00 0.00 3.93
2662 5474 0.969894 GTGCTATGTCCTCCGGCTAT 59.030 55.000 0.00 0.00 0.00 2.97
2663 5475 2.168496 GTGCTATGTCCTCCGGCTATA 58.832 52.381 0.00 0.00 0.00 1.31
2664 5476 2.094649 GTGCTATGTCCTCCGGCTATAC 60.095 54.545 0.00 0.00 0.00 1.47
2665 5477 1.477295 GCTATGTCCTCCGGCTATACC 59.523 57.143 0.00 0.00 0.00 2.73
2666 5478 2.884720 GCTATGTCCTCCGGCTATACCT 60.885 54.545 0.00 0.00 35.61 3.08
2667 5479 1.633774 ATGTCCTCCGGCTATACCTG 58.366 55.000 0.00 0.00 35.61 4.00
2668 5480 0.469331 TGTCCTCCGGCTATACCTGG 60.469 60.000 0.00 0.00 35.61 4.45
2669 5481 0.178970 GTCCTCCGGCTATACCTGGA 60.179 60.000 0.00 0.00 38.35 3.86
2670 5482 0.178970 TCCTCCGGCTATACCTGGAC 60.179 60.000 0.00 0.00 36.56 4.02
2671 5483 1.524863 CCTCCGGCTATACCTGGACG 61.525 65.000 0.00 0.00 36.56 4.79
2672 5484 0.822532 CTCCGGCTATACCTGGACGT 60.823 60.000 0.00 0.00 36.56 4.34
2673 5485 1.105167 TCCGGCTATACCTGGACGTG 61.105 60.000 0.00 0.00 36.56 4.49
2674 5486 1.105167 CCGGCTATACCTGGACGTGA 61.105 60.000 0.00 0.00 31.31 4.35
2675 5487 0.311165 CGGCTATACCTGGACGTGAG 59.689 60.000 0.00 0.00 35.61 3.51
2676 5488 0.032267 GGCTATACCTGGACGTGAGC 59.968 60.000 0.00 1.56 34.51 4.26
2677 5489 0.032267 GCTATACCTGGACGTGAGCC 59.968 60.000 0.00 0.00 0.00 4.70
2678 5490 1.399714 CTATACCTGGACGTGAGCCA 58.600 55.000 0.00 0.00 36.22 4.75
2679 5491 1.754803 CTATACCTGGACGTGAGCCAA 59.245 52.381 0.00 0.00 36.97 4.52
2680 5492 0.249398 ATACCTGGACGTGAGCCAAC 59.751 55.000 0.00 0.00 36.97 3.77
2681 5493 0.830444 TACCTGGACGTGAGCCAACT 60.830 55.000 0.00 0.00 36.97 3.16
2682 5494 1.374758 CCTGGACGTGAGCCAACTC 60.375 63.158 0.00 0.00 43.76 3.01
2683 5495 1.734477 CTGGACGTGAGCCAACTCG 60.734 63.158 0.00 0.00 46.69 4.18
2684 5496 2.142357 CTGGACGTGAGCCAACTCGA 62.142 60.000 0.00 0.00 46.69 4.04
2685 5497 1.444553 GGACGTGAGCCAACTCGAG 60.445 63.158 11.84 11.84 46.69 4.04
2686 5498 2.049063 ACGTGAGCCAACTCGAGC 60.049 61.111 13.61 0.00 46.69 5.03
2687 5499 2.811317 CGTGAGCCAACTCGAGCC 60.811 66.667 13.61 0.00 46.69 4.70
2688 5500 2.343758 GTGAGCCAACTCGAGCCA 59.656 61.111 13.61 0.00 46.69 4.75
2689 5501 1.739562 GTGAGCCAACTCGAGCCAG 60.740 63.158 13.61 1.70 46.69 4.85
2690 5502 2.817396 GAGCCAACTCGAGCCAGC 60.817 66.667 13.61 12.62 32.04 4.85
2691 5503 3.308014 GAGCCAACTCGAGCCAGCT 62.308 63.158 19.92 19.92 32.04 4.24
2692 5504 2.817396 GCCAACTCGAGCCAGCTC 60.817 66.667 13.61 9.67 39.55 4.09
2712 5524 4.426112 GCCGAGCCTGCCAAAAGC 62.426 66.667 0.00 0.00 44.14 3.51
2713 5525 2.674380 CCGAGCCTGCCAAAAGCT 60.674 61.111 0.00 0.00 44.23 3.74
2715 5527 2.873288 GAGCCTGCCAAAAGCTCG 59.127 61.111 0.00 0.00 43.18 5.03
2716 5528 3.333898 GAGCCTGCCAAAAGCTCGC 62.334 63.158 0.00 0.00 43.18 5.03
2717 5529 4.426112 GCCTGCCAAAAGCTCGCC 62.426 66.667 0.00 0.00 44.23 5.54
2718 5530 4.107051 CCTGCCAAAAGCTCGCCG 62.107 66.667 0.00 0.00 44.23 6.46
2719 5531 3.357079 CTGCCAAAAGCTCGCCGT 61.357 61.111 0.00 0.00 44.23 5.68
2720 5532 2.904866 TGCCAAAAGCTCGCCGTT 60.905 55.556 0.00 0.00 44.23 4.44
2721 5533 2.126850 GCCAAAAGCTCGCCGTTC 60.127 61.111 0.00 0.00 38.99 3.95
2722 5534 2.561373 CCAAAAGCTCGCCGTTCC 59.439 61.111 0.00 0.00 0.00 3.62
2723 5535 1.966451 CCAAAAGCTCGCCGTTCCT 60.966 57.895 0.00 0.00 0.00 3.36
2724 5536 1.497722 CAAAAGCTCGCCGTTCCTC 59.502 57.895 0.00 0.00 0.00 3.71
2725 5537 2.027625 AAAAGCTCGCCGTTCCTCG 61.028 57.895 0.00 0.00 39.52 4.63
2744 5556 4.443266 GCCGAGTCGAGCCAAGCT 62.443 66.667 15.64 0.00 43.88 3.74
2759 5571 3.267860 GCTCAATGCTCCGGCGAG 61.268 66.667 9.30 5.11 42.25 5.03
2767 5579 2.047274 CTCCGGCGAGCCTCAAAA 60.047 61.111 9.30 0.00 0.00 2.44
2768 5580 2.358247 TCCGGCGAGCCTCAAAAC 60.358 61.111 9.30 0.00 0.00 2.43
2769 5581 3.788766 CCGGCGAGCCTCAAAACG 61.789 66.667 9.30 0.00 0.00 3.60
2770 5582 3.788766 CGGCGAGCCTCAAAACGG 61.789 66.667 12.70 0.00 0.00 4.44
2771 5583 2.358247 GGCGAGCCTCAAAACGGA 60.358 61.111 6.90 0.00 0.00 4.69
2772 5584 2.391389 GGCGAGCCTCAAAACGGAG 61.391 63.158 6.90 0.00 34.62 4.63
2773 5585 3.028366 GCGAGCCTCAAAACGGAGC 62.028 63.158 0.00 0.00 33.47 4.70
2774 5586 1.374758 CGAGCCTCAAAACGGAGCT 60.375 57.895 0.00 0.00 33.47 4.09
2775 5587 1.355066 CGAGCCTCAAAACGGAGCTC 61.355 60.000 4.71 4.71 36.04 4.09
2776 5588 1.355066 GAGCCTCAAAACGGAGCTCG 61.355 60.000 7.83 5.83 45.88 5.03
2777 5589 1.374252 GCCTCAAAACGGAGCTCGA 60.374 57.895 7.83 0.00 42.43 4.04
2778 5590 1.627550 GCCTCAAAACGGAGCTCGAC 61.628 60.000 7.83 0.00 42.43 4.20
2779 5591 1.014564 CCTCAAAACGGAGCTCGACC 61.015 60.000 7.83 0.00 42.43 4.79
2780 5592 1.005394 TCAAAACGGAGCTCGACCC 60.005 57.895 7.83 0.00 42.43 4.46
2799 5611 2.514824 GGCTTTGCCCTAGCTCGG 60.515 66.667 0.00 0.00 44.06 4.63
2800 5612 2.269241 GCTTTGCCCTAGCTCGGT 59.731 61.111 3.23 0.00 40.80 4.69
2801 5613 2.109126 GCTTTGCCCTAGCTCGGTG 61.109 63.158 3.23 0.00 40.80 4.94
2802 5614 2.046314 TTTGCCCTAGCTCGGTGC 60.046 61.111 3.23 7.11 40.80 5.01
2803 5615 2.803155 CTTTGCCCTAGCTCGGTGCA 62.803 60.000 13.94 13.94 45.94 4.57
2804 5616 2.803155 TTTGCCCTAGCTCGGTGCAG 62.803 60.000 16.26 0.00 45.94 4.41
2806 5618 3.774528 CCCTAGCTCGGTGCAGCA 61.775 66.667 17.33 0.00 45.94 4.41
2807 5619 2.503061 CCTAGCTCGGTGCAGCAT 59.497 61.111 17.33 0.91 45.94 3.79
2808 5620 1.886313 CCTAGCTCGGTGCAGCATG 60.886 63.158 17.33 8.68 45.94 4.06
2809 5621 1.886313 CTAGCTCGGTGCAGCATGG 60.886 63.158 17.33 6.07 45.94 3.66
2812 5624 3.506096 CTCGGTGCAGCATGGCAG 61.506 66.667 17.33 0.00 45.96 4.85
2816 5628 3.823330 GTGCAGCATGGCAGGCTC 61.823 66.667 25.46 18.51 45.96 4.70
2836 5648 2.979676 CAAGCCTGCGTGCTCCAA 60.980 61.111 0.00 0.00 41.80 3.53
2837 5649 2.670934 AAGCCTGCGTGCTCCAAG 60.671 61.111 0.00 0.00 41.80 3.61
2838 5650 3.482232 AAGCCTGCGTGCTCCAAGT 62.482 57.895 0.00 0.00 41.80 3.16
2839 5651 3.426568 GCCTGCGTGCTCCAAGTC 61.427 66.667 0.00 0.00 0.00 3.01
2840 5652 2.031012 CCTGCGTGCTCCAAGTCA 59.969 61.111 0.00 0.00 0.00 3.41
2841 5653 2.320587 CCTGCGTGCTCCAAGTCAC 61.321 63.158 0.00 0.00 0.00 3.67
2842 5654 1.301244 CTGCGTGCTCCAAGTCACT 60.301 57.895 0.00 0.00 0.00 3.41
2843 5655 1.563435 CTGCGTGCTCCAAGTCACTG 61.563 60.000 0.00 0.00 0.00 3.66
2844 5656 2.959357 GCGTGCTCCAAGTCACTGC 61.959 63.158 0.00 0.00 0.00 4.40
2845 5657 2.320587 CGTGCTCCAAGTCACTGCC 61.321 63.158 0.00 0.00 0.00 4.85
2846 5658 1.227943 GTGCTCCAAGTCACTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
2847 5659 0.607489 GTGCTCCAAGTCACTGCCAT 60.607 55.000 0.00 0.00 0.00 4.40
2862 5674 2.741985 CATGTGGGAGCGCGTTGA 60.742 61.111 8.43 0.00 0.00 3.18
2889 5701 4.372656 GCATGGAGTTAGCTGGTAGTTAG 58.627 47.826 0.00 0.00 0.00 2.34
3019 7263 0.106769 TTGCTTGACAGTGCCAGGAA 60.107 50.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 1.066787 GCCAGTAAGAGGGTGTGTCTC 60.067 57.143 0.00 0.00 0.00 3.36
134 2400 3.064134 GGCTCTCTTAATTTGAAGCCGTC 59.936 47.826 13.10 0.00 0.00 4.79
136 2402 3.274288 AGGCTCTCTTAATTTGAAGCCG 58.726 45.455 17.55 0.00 44.98 5.52
167 2433 8.414778 GCCAGAAACTACTACACACTTATCTAT 58.585 37.037 0.00 0.00 0.00 1.98
168 2434 7.614583 AGCCAGAAACTACTACACACTTATCTA 59.385 37.037 0.00 0.00 0.00 1.98
169 2435 6.437793 AGCCAGAAACTACTACACACTTATCT 59.562 38.462 0.00 0.00 0.00 1.98
170 2436 6.631962 AGCCAGAAACTACTACACACTTATC 58.368 40.000 0.00 0.00 0.00 1.75
171 2437 6.607004 AGCCAGAAACTACTACACACTTAT 57.393 37.500 0.00 0.00 0.00 1.73
172 2438 6.415206 AAGCCAGAAACTACTACACACTTA 57.585 37.500 0.00 0.00 0.00 2.24
173 2439 4.957684 AGCCAGAAACTACTACACACTT 57.042 40.909 0.00 0.00 0.00 3.16
174 2440 4.957684 AAGCCAGAAACTACTACACACT 57.042 40.909 0.00 0.00 0.00 3.55
175 2441 6.872020 TCAATAAGCCAGAAACTACTACACAC 59.128 38.462 0.00 0.00 0.00 3.82
176 2442 6.999950 TCAATAAGCCAGAAACTACTACACA 58.000 36.000 0.00 0.00 0.00 3.72
177 2443 7.011482 CCATCAATAAGCCAGAAACTACTACAC 59.989 40.741 0.00 0.00 0.00 2.90
178 2444 7.047891 CCATCAATAAGCCAGAAACTACTACA 58.952 38.462 0.00 0.00 0.00 2.74
179 2445 6.017852 GCCATCAATAAGCCAGAAACTACTAC 60.018 42.308 0.00 0.00 0.00 2.73
180 2446 6.055588 GCCATCAATAAGCCAGAAACTACTA 58.944 40.000 0.00 0.00 0.00 1.82
181 2447 4.884164 GCCATCAATAAGCCAGAAACTACT 59.116 41.667 0.00 0.00 0.00 2.57
182 2448 4.884164 AGCCATCAATAAGCCAGAAACTAC 59.116 41.667 0.00 0.00 0.00 2.73
183 2449 5.116084 AGCCATCAATAAGCCAGAAACTA 57.884 39.130 0.00 0.00 0.00 2.24
184 2450 3.950395 GAGCCATCAATAAGCCAGAAACT 59.050 43.478 0.00 0.00 0.00 2.66
185 2451 3.696051 TGAGCCATCAATAAGCCAGAAAC 59.304 43.478 0.00 0.00 30.61 2.78
186 2452 3.966979 TGAGCCATCAATAAGCCAGAAA 58.033 40.909 0.00 0.00 30.61 2.52
187 2453 3.650281 TGAGCCATCAATAAGCCAGAA 57.350 42.857 0.00 0.00 30.61 3.02
188 2454 3.117776 ACATGAGCCATCAATAAGCCAGA 60.118 43.478 0.00 0.00 39.39 3.86
189 2455 3.220110 ACATGAGCCATCAATAAGCCAG 58.780 45.455 0.00 0.00 39.39 4.85
190 2456 3.301794 ACATGAGCCATCAATAAGCCA 57.698 42.857 0.00 0.00 39.39 4.75
191 2457 5.972107 ATAACATGAGCCATCAATAAGCC 57.028 39.130 0.00 0.00 39.39 4.35
192 2458 7.301054 GTGTATAACATGAGCCATCAATAAGC 58.699 38.462 0.00 0.00 39.39 3.09
193 2459 7.171508 ACGTGTATAACATGAGCCATCAATAAG 59.828 37.037 0.00 0.00 39.39 1.73
194 2460 6.989759 ACGTGTATAACATGAGCCATCAATAA 59.010 34.615 0.00 0.00 39.39 1.40
195 2461 6.423604 CACGTGTATAACATGAGCCATCAATA 59.576 38.462 7.58 0.00 39.39 1.90
196 2462 5.237127 CACGTGTATAACATGAGCCATCAAT 59.763 40.000 7.58 0.00 39.39 2.57
197 2463 4.570369 CACGTGTATAACATGAGCCATCAA 59.430 41.667 7.58 0.00 39.39 2.57
198 2464 4.119136 CACGTGTATAACATGAGCCATCA 58.881 43.478 7.58 0.00 37.29 3.07
199 2465 3.059597 GCACGTGTATAACATGAGCCATC 60.060 47.826 18.38 0.00 43.02 3.51
200 2466 2.872245 GCACGTGTATAACATGAGCCAT 59.128 45.455 18.38 0.00 43.02 4.40
201 2467 2.276201 GCACGTGTATAACATGAGCCA 58.724 47.619 18.38 0.00 43.02 4.75
202 2468 2.276201 TGCACGTGTATAACATGAGCC 58.724 47.619 18.38 0.00 46.46 4.70
203 2469 3.309682 ACATGCACGTGTATAACATGAGC 59.690 43.478 28.40 12.78 46.93 4.26
204 2470 5.469373 AACATGCACGTGTATAACATGAG 57.531 39.130 28.40 15.13 40.39 2.90
205 2471 6.035542 CACTAACATGCACGTGTATAACATGA 59.964 38.462 28.40 13.74 40.39 3.07
206 2472 6.184706 CACTAACATGCACGTGTATAACATG 58.815 40.000 23.19 23.19 42.92 3.21
207 2473 5.293324 CCACTAACATGCACGTGTATAACAT 59.707 40.000 19.02 9.19 0.00 2.71
208 2474 4.627900 CCACTAACATGCACGTGTATAACA 59.372 41.667 19.02 7.05 0.00 2.41
209 2475 4.493545 GCCACTAACATGCACGTGTATAAC 60.494 45.833 19.02 0.65 0.00 1.89
210 2476 3.619483 GCCACTAACATGCACGTGTATAA 59.381 43.478 19.02 7.02 0.00 0.98
211 2477 3.191669 GCCACTAACATGCACGTGTATA 58.808 45.455 19.02 5.30 0.00 1.47
212 2478 2.006888 GCCACTAACATGCACGTGTAT 58.993 47.619 18.38 16.07 0.00 2.29
253 2519 2.358125 CCCGTGATGCGTTGGTGA 60.358 61.111 0.00 0.00 39.32 4.02
299 2565 4.681978 GTCCCAGCTGCGTCGGTT 62.682 66.667 8.66 0.00 0.00 4.44
305 2571 4.803426 GGAGACGTCCCAGCTGCG 62.803 72.222 13.01 9.57 36.76 5.18
306 2572 2.010582 CTAGGAGACGTCCCAGCTGC 62.011 65.000 20.68 5.64 45.26 5.25
307 2573 2.111162 CTAGGAGACGTCCCAGCTG 58.889 63.158 20.68 6.78 45.26 4.24
308 2574 4.668151 CTAGGAGACGTCCCAGCT 57.332 61.111 20.68 3.90 45.26 4.24
310 2576 0.741915 GAAGCTAGGAGACGTCCCAG 59.258 60.000 20.68 16.48 45.26 4.45
311 2577 1.030488 CGAAGCTAGGAGACGTCCCA 61.030 60.000 20.68 9.28 45.26 4.37
312 2578 1.728672 CGAAGCTAGGAGACGTCCC 59.271 63.158 13.01 13.26 45.26 4.46
326 2592 1.226717 GTCCGTGGAGCTAGCGAAG 60.227 63.158 9.55 0.00 0.00 3.79
327 2593 2.882876 GTCCGTGGAGCTAGCGAA 59.117 61.111 9.55 0.00 0.00 4.70
328 2594 2.857575 TACGTCCGTGGAGCTAGCGA 62.858 60.000 9.55 0.00 0.00 4.93
381 2647 8.579850 AACATCTACATTTGTATGGTGTCAAT 57.420 30.769 6.56 0.00 36.01 2.57
400 2666 8.934697 AGGGTATGTACATGTATGTAAACATCT 58.065 33.333 18.81 4.90 44.11 2.90
401 2667 9.204570 GAGGGTATGTACATGTATGTAAACATC 57.795 37.037 18.81 2.65 44.11 3.06
402 2668 8.154856 GGAGGGTATGTACATGTATGTAAACAT 58.845 37.037 18.81 11.41 44.11 2.71
403 2669 7.346175 AGGAGGGTATGTACATGTATGTAAACA 59.654 37.037 18.81 3.97 44.11 2.83
404 2670 7.732996 AGGAGGGTATGTACATGTATGTAAAC 58.267 38.462 18.81 5.65 44.11 2.01
405 2671 7.924358 AGGAGGGTATGTACATGTATGTAAA 57.076 36.000 18.81 2.05 44.11 2.01
406 2672 7.452501 GGTAGGAGGGTATGTACATGTATGTAA 59.547 40.741 18.81 0.00 44.11 2.41
407 2673 6.950041 GGTAGGAGGGTATGTACATGTATGTA 59.050 42.308 18.81 2.67 41.97 2.29
408 2674 5.778750 GGTAGGAGGGTATGTACATGTATGT 59.221 44.000 18.81 3.65 44.48 2.29
409 2675 6.017192 AGGTAGGAGGGTATGTACATGTATG 58.983 44.000 18.81 0.00 0.00 2.39
410 2676 6.046881 AGAGGTAGGAGGGTATGTACATGTAT 59.953 42.308 18.81 0.00 0.00 2.29
411 2677 5.374753 AGAGGTAGGAGGGTATGTACATGTA 59.625 44.000 18.81 0.08 0.00 2.29
412 2678 4.170251 AGAGGTAGGAGGGTATGTACATGT 59.830 45.833 18.81 2.69 0.00 3.21
413 2679 4.742012 AGAGGTAGGAGGGTATGTACATG 58.258 47.826 18.81 0.00 0.00 3.21
414 2680 6.738205 ATAGAGGTAGGAGGGTATGTACAT 57.262 41.667 13.93 13.93 0.00 2.29
415 2681 6.541264 AATAGAGGTAGGAGGGTATGTACA 57.459 41.667 0.00 0.00 0.00 2.90
416 2682 5.647225 CGAATAGAGGTAGGAGGGTATGTAC 59.353 48.000 0.00 0.00 0.00 2.90
417 2683 5.549228 TCGAATAGAGGTAGGAGGGTATGTA 59.451 44.000 0.00 0.00 0.00 2.29
418 2684 4.353191 TCGAATAGAGGTAGGAGGGTATGT 59.647 45.833 0.00 0.00 0.00 2.29
419 2685 4.919793 TCGAATAGAGGTAGGAGGGTATG 58.080 47.826 0.00 0.00 0.00 2.39
420 2686 4.850963 TCTCGAATAGAGGTAGGAGGGTAT 59.149 45.833 0.00 0.00 46.82 2.73
421 2687 4.237843 TCTCGAATAGAGGTAGGAGGGTA 58.762 47.826 0.00 0.00 46.82 3.69
422 2688 3.054576 TCTCGAATAGAGGTAGGAGGGT 58.945 50.000 0.00 0.00 46.82 4.34
423 2689 3.791953 TCTCGAATAGAGGTAGGAGGG 57.208 52.381 0.00 0.00 46.82 4.30
424 2690 5.174037 AGATCTCGAATAGAGGTAGGAGG 57.826 47.826 0.00 0.00 46.82 4.30
425 2691 5.800296 TGAGATCTCGAATAGAGGTAGGAG 58.200 45.833 17.76 0.00 46.82 3.69
426 2692 5.827326 TGAGATCTCGAATAGAGGTAGGA 57.173 43.478 17.76 0.00 46.82 2.94
427 2693 6.540914 GGTATGAGATCTCGAATAGAGGTAGG 59.459 46.154 17.76 0.00 46.82 3.18
428 2694 6.256975 CGGTATGAGATCTCGAATAGAGGTAG 59.743 46.154 17.76 0.00 46.82 3.18
458 2724 3.474570 AGGCTCTCCGGTGATGCC 61.475 66.667 26.31 26.31 39.13 4.40
648 2914 6.421801 GCAAATTTAATTATGAGGCGCTCAAT 59.578 34.615 7.64 0.48 44.04 2.57
649 2915 5.748152 GCAAATTTAATTATGAGGCGCTCAA 59.252 36.000 7.64 0.00 44.04 3.02
650 2916 5.280945 GCAAATTTAATTATGAGGCGCTCA 58.719 37.500 7.64 9.80 44.99 4.26
651 2917 4.379793 CGCAAATTTAATTATGAGGCGCTC 59.620 41.667 7.64 3.37 35.41 5.03
652 2918 4.202010 ACGCAAATTTAATTATGAGGCGCT 60.202 37.500 7.64 0.00 45.13 5.92
655 2921 4.085619 CGCACGCAAATTTAATTATGAGGC 60.086 41.667 0.00 0.00 0.00 4.70
657 2923 6.553255 AACGCACGCAAATTTAATTATGAG 57.447 33.333 0.00 0.00 0.00 2.90
658 2924 6.936222 AAACGCACGCAAATTTAATTATGA 57.064 29.167 0.00 0.00 0.00 2.15
659 2925 7.985199 AAAAACGCACGCAAATTTAATTATG 57.015 28.000 0.00 0.00 0.00 1.90
663 2929 6.512177 TGTAAAAACGCACGCAAATTTAAT 57.488 29.167 0.00 0.00 0.00 1.40
664 2930 5.944049 TGTAAAAACGCACGCAAATTTAA 57.056 30.435 0.00 0.00 0.00 1.52
665 2931 5.944049 TTGTAAAAACGCACGCAAATTTA 57.056 30.435 0.00 0.00 0.00 1.40
666 2932 4.842139 TTGTAAAAACGCACGCAAATTT 57.158 31.818 0.00 0.00 0.00 1.82
667 2933 5.915758 TCTATTGTAAAAACGCACGCAAATT 59.084 32.000 0.00 0.00 0.00 1.82
668 2934 5.341196 GTCTATTGTAAAAACGCACGCAAAT 59.659 36.000 0.00 0.00 0.00 2.32
669 2935 4.671516 GTCTATTGTAAAAACGCACGCAAA 59.328 37.500 0.00 0.00 0.00 3.68
670 2936 4.212911 GTCTATTGTAAAAACGCACGCAA 58.787 39.130 0.00 0.00 0.00 4.85
671 2937 3.247886 TGTCTATTGTAAAAACGCACGCA 59.752 39.130 0.00 0.00 0.00 5.24
672 2938 3.801293 TGTCTATTGTAAAAACGCACGC 58.199 40.909 0.00 0.00 0.00 5.34
673 2939 4.843984 CCTTGTCTATTGTAAAAACGCACG 59.156 41.667 0.00 0.00 0.00 5.34
674 2940 5.754778 ACCTTGTCTATTGTAAAAACGCAC 58.245 37.500 0.00 0.00 0.00 5.34
675 2941 6.380095 AACCTTGTCTATTGTAAAAACGCA 57.620 33.333 0.00 0.00 0.00 5.24
676 2942 7.536281 CCTAAACCTTGTCTATTGTAAAAACGC 59.464 37.037 0.00 0.00 0.00 4.84
677 2943 8.019094 CCCTAAACCTTGTCTATTGTAAAAACG 58.981 37.037 0.00 0.00 0.00 3.60
678 2944 7.811236 GCCCTAAACCTTGTCTATTGTAAAAAC 59.189 37.037 0.00 0.00 0.00 2.43
679 2945 7.308710 CGCCCTAAACCTTGTCTATTGTAAAAA 60.309 37.037 0.00 0.00 0.00 1.94
680 2946 6.149807 CGCCCTAAACCTTGTCTATTGTAAAA 59.850 38.462 0.00 0.00 0.00 1.52
681 2947 5.644636 CGCCCTAAACCTTGTCTATTGTAAA 59.355 40.000 0.00 0.00 0.00 2.01
682 2948 5.180271 CGCCCTAAACCTTGTCTATTGTAA 58.820 41.667 0.00 0.00 0.00 2.41
683 2949 4.383335 CCGCCCTAAACCTTGTCTATTGTA 60.383 45.833 0.00 0.00 0.00 2.41
684 2950 3.606687 CGCCCTAAACCTTGTCTATTGT 58.393 45.455 0.00 0.00 0.00 2.71
685 2951 2.943033 CCGCCCTAAACCTTGTCTATTG 59.057 50.000 0.00 0.00 0.00 1.90
686 2952 2.841881 TCCGCCCTAAACCTTGTCTATT 59.158 45.455 0.00 0.00 0.00 1.73
687 2953 2.474112 TCCGCCCTAAACCTTGTCTAT 58.526 47.619 0.00 0.00 0.00 1.98
688 2954 1.941377 TCCGCCCTAAACCTTGTCTA 58.059 50.000 0.00 0.00 0.00 2.59
689 2955 1.286248 ATCCGCCCTAAACCTTGTCT 58.714 50.000 0.00 0.00 0.00 3.41
690 2956 1.743394 CAATCCGCCCTAAACCTTGTC 59.257 52.381 0.00 0.00 0.00 3.18
691 2957 1.834188 CAATCCGCCCTAAACCTTGT 58.166 50.000 0.00 0.00 0.00 3.16
692 2958 0.455815 GCAATCCGCCCTAAACCTTG 59.544 55.000 0.00 0.00 32.94 3.61
693 2959 0.039035 TGCAATCCGCCCTAAACCTT 59.961 50.000 0.00 0.00 41.33 3.50
694 2960 0.258774 ATGCAATCCGCCCTAAACCT 59.741 50.000 0.00 0.00 41.33 3.50
695 2961 1.111277 AATGCAATCCGCCCTAAACC 58.889 50.000 0.00 0.00 41.33 3.27
696 2962 2.959507 AAATGCAATCCGCCCTAAAC 57.040 45.000 0.00 0.00 41.33 2.01
697 2963 5.362430 AGAAATAAATGCAATCCGCCCTAAA 59.638 36.000 0.00 0.00 41.33 1.85
698 2964 4.892934 AGAAATAAATGCAATCCGCCCTAA 59.107 37.500 0.00 0.00 41.33 2.69
699 2965 4.469657 AGAAATAAATGCAATCCGCCCTA 58.530 39.130 0.00 0.00 41.33 3.53
700 2966 3.299503 AGAAATAAATGCAATCCGCCCT 58.700 40.909 0.00 0.00 41.33 5.19
701 2967 3.733443 AGAAATAAATGCAATCCGCCC 57.267 42.857 0.00 0.00 41.33 6.13
702 2968 5.438761 ACTAGAAATAAATGCAATCCGCC 57.561 39.130 0.00 0.00 41.33 6.13
703 2969 6.073003 AGCTACTAGAAATAAATGCAATCCGC 60.073 38.462 0.00 0.00 42.89 5.54
704 2970 7.426929 AGCTACTAGAAATAAATGCAATCCG 57.573 36.000 0.00 0.00 0.00 4.18
746 3012 9.803315 CACATTACGTATGCATATAGGAATAGT 57.197 33.333 17.10 14.87 37.81 2.12
749 3015 9.890629 ATTCACATTACGTATGCATATAGGAAT 57.109 29.630 10.16 12.34 37.81 3.01
750 3016 9.150348 CATTCACATTACGTATGCATATAGGAA 57.850 33.333 10.16 10.59 37.81 3.36
751 3017 7.277760 GCATTCACATTACGTATGCATATAGGA 59.722 37.037 10.16 1.17 38.79 2.94
752 3018 7.278646 AGCATTCACATTACGTATGCATATAGG 59.721 37.037 16.94 5.35 40.59 2.57
753 3019 8.189709 AGCATTCACATTACGTATGCATATAG 57.810 34.615 16.94 9.87 40.59 1.31
754 3020 9.816354 ATAGCATTCACATTACGTATGCATATA 57.184 29.630 16.94 0.00 40.59 0.86
755 3021 8.722480 ATAGCATTCACATTACGTATGCATAT 57.278 30.769 16.94 10.02 40.59 1.78
756 3022 8.546597 AATAGCATTCACATTACGTATGCATA 57.453 30.769 16.94 1.16 40.59 3.14
757 3023 7.439157 AATAGCATTCACATTACGTATGCAT 57.561 32.000 16.94 3.79 40.59 3.96
758 3024 6.859420 AATAGCATTCACATTACGTATGCA 57.141 33.333 16.94 0.00 40.59 3.96
759 3025 8.560576 AAAAATAGCATTCACATTACGTATGC 57.439 30.769 8.76 8.76 39.10 3.14
781 3047 4.871871 TGACTATGGGATGGGCTAAAAA 57.128 40.909 0.00 0.00 0.00 1.94
782 3048 4.871871 TTGACTATGGGATGGGCTAAAA 57.128 40.909 0.00 0.00 0.00 1.52
783 3049 5.849475 TCTATTGACTATGGGATGGGCTAAA 59.151 40.000 0.00 0.00 0.00 1.85
784 3050 5.411493 TCTATTGACTATGGGATGGGCTAA 58.589 41.667 0.00 0.00 0.00 3.09
785 3051 5.023514 TCTATTGACTATGGGATGGGCTA 57.976 43.478 0.00 0.00 0.00 3.93
786 3052 3.874316 TCTATTGACTATGGGATGGGCT 58.126 45.455 0.00 0.00 0.00 5.19
787 3053 4.851639 ATCTATTGACTATGGGATGGGC 57.148 45.455 0.00 0.00 0.00 5.36
788 3054 6.215431 TGGTTATCTATTGACTATGGGATGGG 59.785 42.308 0.00 0.00 0.00 4.00
789 3055 7.106239 GTGGTTATCTATTGACTATGGGATGG 58.894 42.308 0.00 0.00 0.00 3.51
790 3056 7.038017 AGGTGGTTATCTATTGACTATGGGATG 60.038 40.741 0.00 0.00 0.00 3.51
791 3057 7.025620 AGGTGGTTATCTATTGACTATGGGAT 58.974 38.462 0.00 0.00 0.00 3.85
792 3058 6.390504 AGGTGGTTATCTATTGACTATGGGA 58.609 40.000 0.00 0.00 0.00 4.37
793 3059 6.688073 AGGTGGTTATCTATTGACTATGGG 57.312 41.667 0.00 0.00 0.00 4.00
794 3060 7.841956 CCTAGGTGGTTATCTATTGACTATGG 58.158 42.308 0.00 0.00 0.00 2.74
811 3077 2.182516 AATCTCTGGGACCTAGGTGG 57.817 55.000 22.10 6.79 42.93 4.61
812 3078 4.265073 CAAAAATCTCTGGGACCTAGGTG 58.735 47.826 22.10 4.66 0.00 4.00
813 3079 3.308473 GCAAAAATCTCTGGGACCTAGGT 60.308 47.826 16.26 16.26 0.00 3.08
814 3080 3.282885 GCAAAAATCTCTGGGACCTAGG 58.717 50.000 7.41 7.41 0.00 3.02
815 3081 3.955471 TGCAAAAATCTCTGGGACCTAG 58.045 45.455 0.00 0.00 0.00 3.02
816 3082 4.202567 ACTTGCAAAAATCTCTGGGACCTA 60.203 41.667 0.00 0.00 0.00 3.08
817 3083 2.978156 TGCAAAAATCTCTGGGACCT 57.022 45.000 0.00 0.00 0.00 3.85
818 3084 2.893489 ACTTGCAAAAATCTCTGGGACC 59.107 45.455 0.00 0.00 0.00 4.46
819 3085 3.858503 GCACTTGCAAAAATCTCTGGGAC 60.859 47.826 0.00 0.00 41.59 4.46
820 3086 2.297033 GCACTTGCAAAAATCTCTGGGA 59.703 45.455 0.00 0.00 41.59 4.37
821 3087 2.680577 GCACTTGCAAAAATCTCTGGG 58.319 47.619 0.00 0.00 41.59 4.45
822 3088 2.322161 CGCACTTGCAAAAATCTCTGG 58.678 47.619 0.00 0.00 42.21 3.86
823 3089 1.717645 GCGCACTTGCAAAAATCTCTG 59.282 47.619 0.30 0.00 42.21 3.35
824 3090 1.336240 GGCGCACTTGCAAAAATCTCT 60.336 47.619 10.83 0.00 42.21 3.10
825 3091 1.063031 GGCGCACTTGCAAAAATCTC 58.937 50.000 10.83 0.00 42.21 2.75
826 3092 0.675633 AGGCGCACTTGCAAAAATCT 59.324 45.000 10.83 0.00 42.21 2.40
827 3093 1.456923 GAAGGCGCACTTGCAAAAATC 59.543 47.619 10.83 0.00 40.21 2.17
828 3094 1.069049 AGAAGGCGCACTTGCAAAAAT 59.931 42.857 10.83 0.00 40.21 1.82
829 3095 0.459489 AGAAGGCGCACTTGCAAAAA 59.541 45.000 10.83 0.00 40.21 1.94
830 3096 1.313772 TAGAAGGCGCACTTGCAAAA 58.686 45.000 10.83 0.00 40.21 2.44
831 3097 1.313772 TTAGAAGGCGCACTTGCAAA 58.686 45.000 10.83 1.84 40.21 3.68
832 3098 1.001815 GTTTAGAAGGCGCACTTGCAA 60.002 47.619 10.83 0.00 40.21 4.08
833 3099 0.591170 GTTTAGAAGGCGCACTTGCA 59.409 50.000 10.83 0.00 40.21 4.08
834 3100 0.109735 GGTTTAGAAGGCGCACTTGC 60.110 55.000 10.83 5.08 40.21 4.01
835 3101 0.165944 CGGTTTAGAAGGCGCACTTG 59.834 55.000 10.83 0.00 40.21 3.16
836 3102 0.250166 ACGGTTTAGAAGGCGCACTT 60.250 50.000 10.83 10.56 43.65 3.16
837 3103 0.949105 CACGGTTTAGAAGGCGCACT 60.949 55.000 10.83 8.03 0.00 4.40
838 3104 0.947180 TCACGGTTTAGAAGGCGCAC 60.947 55.000 10.83 0.00 0.00 5.34
839 3105 0.947180 GTCACGGTTTAGAAGGCGCA 60.947 55.000 10.83 0.00 0.00 6.09
840 3106 1.785951 GTCACGGTTTAGAAGGCGC 59.214 57.895 0.00 0.00 0.00 6.53
841 3107 1.349259 CCGTCACGGTTTAGAAGGCG 61.349 60.000 8.54 0.00 42.73 5.52
842 3108 2.452767 CCGTCACGGTTTAGAAGGC 58.547 57.895 8.54 0.00 42.73 4.35
853 3119 5.686159 ATATTACTACTTCCTCCGTCACG 57.314 43.478 0.00 0.00 0.00 4.35
854 3120 7.035840 TCAATATTACTACTTCCTCCGTCAC 57.964 40.000 0.00 0.00 0.00 3.67
855 3121 6.238953 GCTCAATATTACTACTTCCTCCGTCA 60.239 42.308 0.00 0.00 0.00 4.35
856 3122 6.151004 GCTCAATATTACTACTTCCTCCGTC 58.849 44.000 0.00 0.00 0.00 4.79
857 3123 5.278364 CGCTCAATATTACTACTTCCTCCGT 60.278 44.000 0.00 0.00 0.00 4.69
858 3124 5.154932 CGCTCAATATTACTACTTCCTCCG 58.845 45.833 0.00 0.00 0.00 4.63
859 3125 4.924462 GCGCTCAATATTACTACTTCCTCC 59.076 45.833 0.00 0.00 0.00 4.30
860 3126 4.924462 GGCGCTCAATATTACTACTTCCTC 59.076 45.833 7.64 0.00 0.00 3.71
861 3127 4.589374 AGGCGCTCAATATTACTACTTCCT 59.411 41.667 7.64 0.00 0.00 3.36
862 3128 4.884247 AGGCGCTCAATATTACTACTTCC 58.116 43.478 7.64 0.00 0.00 3.46
863 3129 5.529791 TGAGGCGCTCAATATTACTACTTC 58.470 41.667 7.64 0.00 37.57 3.01
864 3130 5.531122 TGAGGCGCTCAATATTACTACTT 57.469 39.130 7.64 0.00 37.57 2.24
865 3131 5.730296 ATGAGGCGCTCAATATTACTACT 57.270 39.130 7.64 0.00 44.04 2.57
866 3132 8.480643 AATTATGAGGCGCTCAATATTACTAC 57.519 34.615 7.64 0.00 44.04 2.73
868 3134 9.672673 ATTAATTATGAGGCGCTCAATATTACT 57.327 29.630 7.64 8.63 44.04 2.24
871 3137 9.236006 AGAATTAATTATGAGGCGCTCAATATT 57.764 29.630 7.64 13.85 44.04 1.28
872 3138 8.798859 AGAATTAATTATGAGGCGCTCAATAT 57.201 30.769 7.64 4.59 44.04 1.28
873 3139 8.621532 AAGAATTAATTATGAGGCGCTCAATA 57.378 30.769 7.64 0.00 44.04 1.90
874 3140 7.516198 AAGAATTAATTATGAGGCGCTCAAT 57.484 32.000 7.64 0.48 44.04 2.57
875 3141 6.942532 AAGAATTAATTATGAGGCGCTCAA 57.057 33.333 7.64 0.00 44.04 3.02
876 3142 6.942532 AAAGAATTAATTATGAGGCGCTCA 57.057 33.333 7.64 9.80 44.99 4.26
923 3189 7.123830 ACACGTCCTTTTATATACGTACGTAC 58.876 38.462 28.99 15.90 45.95 3.67
924 3190 7.241663 ACACGTCCTTTTATATACGTACGTA 57.758 36.000 28.62 28.62 45.95 3.57
925 3191 6.119144 ACACGTCCTTTTATATACGTACGT 57.881 37.500 25.98 25.98 45.95 3.57
926 3192 5.334395 CGACACGTCCTTTTATATACGTACG 59.666 44.000 15.01 15.01 45.95 3.67
957 3223 3.695060 TCTACTAGTGTAGCTGTTCTGGC 59.305 47.826 5.39 0.00 44.26 4.85
972 3249 9.099454 CTGCCCACTTTTATTTTACTCTACTAG 57.901 37.037 0.00 0.00 0.00 2.57
1171 3448 2.187946 CGGCCTTGGCTCGAAGAT 59.812 61.111 11.71 0.00 33.89 2.40
1780 4315 4.101448 CCCGGTTGCCTCCTCCTG 62.101 72.222 0.00 0.00 0.00 3.86
1912 4455 4.410400 GTTGCTCCAGTCCCCGGG 62.410 72.222 15.80 15.80 0.00 5.73
2011 4554 0.108424 GTTCATGCAGACGCCTCTCT 60.108 55.000 0.00 0.00 37.32 3.10
2012 4555 1.416813 CGTTCATGCAGACGCCTCTC 61.417 60.000 7.05 0.00 37.32 3.20
2035 4581 8.185003 ACACACAGAATTAAAAAGCAGAAAAC 57.815 30.769 0.00 0.00 0.00 2.43
2043 4701 7.328982 TGCATGCATACACACAGAATTAAAAAG 59.671 33.333 18.46 0.00 0.00 2.27
2073 4738 2.591429 TGCGTGGGCACTTCACAG 60.591 61.111 0.00 0.00 46.21 3.66
2087 4752 1.953138 GGAGATCGTCCATGCTGCG 60.953 63.158 6.39 0.00 46.10 5.18
2096 4761 2.432510 ACAAAGGGATGAGGAGATCGTC 59.567 50.000 0.00 0.00 42.40 4.20
2116 4789 4.492611 GTGCCACACTTACTAGGAGTAAC 58.507 47.826 0.00 0.00 35.89 2.50
2158 4831 2.969238 GTCTCATGGCGCCATCCG 60.969 66.667 38.60 29.37 40.75 4.18
2168 4841 1.534805 CCGTCGTGATCTGGTCTCATG 60.535 57.143 0.00 0.00 0.00 3.07
2178 4851 0.739561 AAGAGTAGCCCGTCGTGATC 59.260 55.000 0.00 0.00 0.00 2.92
2282 5093 5.587844 ACTCTAGAGCATGGCAATTTTGTAG 59.412 40.000 19.97 0.00 0.00 2.74
2310 5121 8.257306 GGAAAGGATGGCAAATTTAGTCATTTA 58.743 33.333 8.46 0.00 0.00 1.40
2366 5177 4.626604 CCGTAGTCGCATGGTAAGTTTTAA 59.373 41.667 0.00 0.00 35.54 1.52
2372 5183 1.206745 CGCCGTAGTCGCATGGTAAG 61.207 60.000 0.00 0.00 35.54 2.34
2374 5185 2.410060 CGCCGTAGTCGCATGGTA 59.590 61.111 0.00 0.00 35.54 3.25
2389 5200 2.965477 TGGAAATTTTGCAATTGCGC 57.035 40.000 24.58 0.00 45.83 6.09
2390 5201 3.120130 AGCATGGAAATTTTGCAATTGCG 60.120 39.130 24.58 7.48 40.50 4.85
2392 5203 5.365403 ACAGCATGGAAATTTTGCAATTG 57.635 34.783 14.13 0.00 43.62 2.32
2428 5239 6.484288 TGTGTAGGATGGAAAATTCAGTCAT 58.516 36.000 0.00 0.00 0.00 3.06
2516 5328 7.437748 ACCATGGAAATTTTACGAAATTGACA 58.562 30.769 21.47 0.00 42.97 3.58
2544 5356 5.105675 GGTCGGGGCACAATTTATTTTTCTA 60.106 40.000 0.00 0.00 0.00 2.10
2545 5357 4.322424 GGTCGGGGCACAATTTATTTTTCT 60.322 41.667 0.00 0.00 0.00 2.52
2546 5358 3.930229 GGTCGGGGCACAATTTATTTTTC 59.070 43.478 0.00 0.00 0.00 2.29
2559 5371 1.917336 GATTAAGGTGGGTCGGGGCA 61.917 60.000 0.00 0.00 0.00 5.36
2560 5372 1.153025 GATTAAGGTGGGTCGGGGC 60.153 63.158 0.00 0.00 0.00 5.80
2561 5373 1.145377 CGATTAAGGTGGGTCGGGG 59.855 63.158 0.00 0.00 0.00 5.73
2562 5374 4.848685 CGATTAAGGTGGGTCGGG 57.151 61.111 0.00 0.00 0.00 5.14
2563 5375 4.848685 CCGATTAAGGTGGGTCGG 57.151 61.111 0.00 0.00 46.26 4.79
2564 5376 1.523032 GCCCGATTAAGGTGGGTCG 60.523 63.158 10.25 0.03 45.19 4.79
2565 5377 1.153025 GGCCCGATTAAGGTGGGTC 60.153 63.158 10.25 5.09 45.19 4.46
2566 5378 1.618447 AGGCCCGATTAAGGTGGGT 60.618 57.895 0.00 0.00 45.19 4.51
2567 5379 1.152963 CAGGCCCGATTAAGGTGGG 60.153 63.158 0.00 5.32 46.22 4.61
2568 5380 1.152963 CCAGGCCCGATTAAGGTGG 60.153 63.158 0.00 0.00 0.00 4.61
2569 5381 1.823899 GCCAGGCCCGATTAAGGTG 60.824 63.158 0.00 0.00 0.00 4.00
2570 5382 1.645402 ATGCCAGGCCCGATTAAGGT 61.645 55.000 9.64 0.00 0.00 3.50
2571 5383 1.151450 ATGCCAGGCCCGATTAAGG 59.849 57.895 9.64 0.00 0.00 2.69
2572 5384 1.174712 CCATGCCAGGCCCGATTAAG 61.175 60.000 9.64 0.00 0.00 1.85
2573 5385 1.152777 CCATGCCAGGCCCGATTAA 60.153 57.895 9.64 0.00 0.00 1.40
2574 5386 2.515398 CCATGCCAGGCCCGATTA 59.485 61.111 9.64 0.00 0.00 1.75
2586 5398 4.465512 CAACGAGCCGTGCCATGC 62.466 66.667 0.94 0.00 39.99 4.06
2587 5399 3.049674 ACAACGAGCCGTGCCATG 61.050 61.111 0.94 0.00 39.99 3.66
2588 5400 3.049674 CACAACGAGCCGTGCCAT 61.050 61.111 0.94 0.00 39.99 4.40
2589 5401 4.228567 TCACAACGAGCCGTGCCA 62.229 61.111 0.94 0.00 39.99 4.92
2590 5402 3.712881 GTCACAACGAGCCGTGCC 61.713 66.667 0.94 0.00 39.99 5.01
2591 5403 2.964925 TGTCACAACGAGCCGTGC 60.965 61.111 0.94 0.00 39.99 5.34
2592 5404 2.927618 CGTGTCACAACGAGCCGTG 61.928 63.158 3.42 0.00 46.49 4.94
2593 5405 2.657296 CGTGTCACAACGAGCCGT 60.657 61.111 3.42 0.00 46.49 5.68
2594 5406 2.354188 TCGTGTCACAACGAGCCG 60.354 61.111 3.42 0.00 46.99 5.52
2599 5411 3.301579 CGGCTAATAATCGTGTCACAACG 60.302 47.826 3.42 0.00 44.92 4.10
2600 5412 3.000925 CCGGCTAATAATCGTGTCACAAC 59.999 47.826 3.42 0.00 0.00 3.32
2601 5413 3.191669 CCGGCTAATAATCGTGTCACAA 58.808 45.455 3.42 0.00 0.00 3.33
2602 5414 2.482316 CCCGGCTAATAATCGTGTCACA 60.482 50.000 3.42 0.00 0.00 3.58
2603 5415 2.132762 CCCGGCTAATAATCGTGTCAC 58.867 52.381 0.00 0.00 0.00 3.67
2604 5416 1.758280 ACCCGGCTAATAATCGTGTCA 59.242 47.619 0.00 0.00 0.00 3.58
2605 5417 2.401351 GACCCGGCTAATAATCGTGTC 58.599 52.381 0.00 0.00 0.00 3.67
2606 5418 1.269413 CGACCCGGCTAATAATCGTGT 60.269 52.381 0.00 0.00 0.00 4.49
2607 5419 1.269413 ACGACCCGGCTAATAATCGTG 60.269 52.381 0.00 0.00 40.95 4.35
2608 5420 1.035139 ACGACCCGGCTAATAATCGT 58.965 50.000 0.00 0.00 37.93 3.73
2609 5421 1.269413 ACACGACCCGGCTAATAATCG 60.269 52.381 0.00 0.00 35.74 3.34
2610 5422 2.521105 ACACGACCCGGCTAATAATC 57.479 50.000 0.00 0.00 0.00 1.75
2611 5423 2.093341 ACAACACGACCCGGCTAATAAT 60.093 45.455 0.00 0.00 0.00 1.28
2612 5424 1.275856 ACAACACGACCCGGCTAATAA 59.724 47.619 0.00 0.00 0.00 1.40
2613 5425 0.896923 ACAACACGACCCGGCTAATA 59.103 50.000 0.00 0.00 0.00 0.98
2614 5426 0.672401 CACAACACGACCCGGCTAAT 60.672 55.000 0.00 0.00 0.00 1.73
2615 5427 1.301087 CACAACACGACCCGGCTAA 60.301 57.895 0.00 0.00 0.00 3.09
2616 5428 2.340809 CACAACACGACCCGGCTA 59.659 61.111 0.00 0.00 0.00 3.93
2619 5431 4.920112 TGGCACAACACGACCCGG 62.920 66.667 0.00 0.00 31.92 5.73
2620 5432 3.345808 CTGGCACAACACGACCCG 61.346 66.667 0.00 0.00 38.70 5.28
2621 5433 3.660111 GCTGGCACAACACGACCC 61.660 66.667 0.00 0.00 38.70 4.46
2622 5434 3.660111 GGCTGGCACAACACGACC 61.660 66.667 0.00 0.00 38.70 4.79
2623 5435 3.660111 GGGCTGGCACAACACGAC 61.660 66.667 2.88 0.00 38.70 4.34
2624 5436 4.182433 TGGGCTGGCACAACACGA 62.182 61.111 2.88 0.00 38.70 4.35
2625 5437 3.964875 GTGGGCTGGCACAACACG 61.965 66.667 0.00 0.00 38.70 4.49
2626 5438 3.964875 CGTGGGCTGGCACAACAC 61.965 66.667 0.00 0.89 38.70 3.32
2627 5439 4.497984 ACGTGGGCTGGCACAACA 62.498 61.111 0.00 0.00 38.70 3.33
2628 5440 3.964875 CACGTGGGCTGGCACAAC 61.965 66.667 7.95 0.00 38.70 3.32
2631 5443 3.976701 ATAGCACGTGGGCTGGCAC 62.977 63.158 18.88 0.00 45.44 5.01
2632 5444 3.716195 ATAGCACGTGGGCTGGCA 61.716 61.111 18.88 0.00 45.44 4.92
2633 5445 3.204827 CATAGCACGTGGGCTGGC 61.205 66.667 18.88 0.64 45.44 4.85
2634 5446 1.815421 GACATAGCACGTGGGCTGG 60.815 63.158 18.88 8.54 45.44 4.85
2635 5447 1.815421 GGACATAGCACGTGGGCTG 60.815 63.158 18.88 1.63 45.44 4.85
2637 5449 1.521681 GAGGACATAGCACGTGGGC 60.522 63.158 18.88 3.25 0.00 5.36
2638 5450 1.144057 GGAGGACATAGCACGTGGG 59.856 63.158 18.88 0.00 0.00 4.61
2639 5451 1.226974 CGGAGGACATAGCACGTGG 60.227 63.158 18.88 2.48 0.00 4.94
2640 5452 4.402192 CGGAGGACATAGCACGTG 57.598 61.111 12.28 12.28 0.00 4.49
2653 5465 0.822532 ACGTCCAGGTATAGCCGGAG 60.823 60.000 5.05 4.98 43.70 4.63
2654 5466 1.105167 CACGTCCAGGTATAGCCGGA 61.105 60.000 5.05 2.64 43.70 5.14
2655 5467 1.105167 TCACGTCCAGGTATAGCCGG 61.105 60.000 0.00 0.00 43.70 6.13
2656 5468 0.311165 CTCACGTCCAGGTATAGCCG 59.689 60.000 0.00 0.00 43.70 5.52
2657 5469 0.032267 GCTCACGTCCAGGTATAGCC 59.968 60.000 0.00 0.00 37.58 3.93
2658 5470 0.032267 GGCTCACGTCCAGGTATAGC 59.968 60.000 0.00 0.00 0.00 2.97
2659 5471 1.399714 TGGCTCACGTCCAGGTATAG 58.600 55.000 0.00 0.00 0.00 1.31
2660 5472 1.479323 GTTGGCTCACGTCCAGGTATA 59.521 52.381 0.00 0.00 34.66 1.47
2661 5473 0.249398 GTTGGCTCACGTCCAGGTAT 59.751 55.000 0.00 0.00 34.66 2.73
2662 5474 0.830444 AGTTGGCTCACGTCCAGGTA 60.830 55.000 0.00 0.00 34.66 3.08
2663 5475 2.100879 GAGTTGGCTCACGTCCAGGT 62.101 60.000 0.00 0.00 41.29 4.00
2664 5476 1.374758 GAGTTGGCTCACGTCCAGG 60.375 63.158 0.00 0.00 41.29 4.45
2665 5477 1.734477 CGAGTTGGCTCACGTCCAG 60.734 63.158 0.00 0.00 41.71 3.86
2666 5478 2.142357 CTCGAGTTGGCTCACGTCCA 62.142 60.000 3.62 0.00 41.71 4.02
2667 5479 1.444553 CTCGAGTTGGCTCACGTCC 60.445 63.158 3.62 0.00 41.71 4.79
2668 5480 2.089349 GCTCGAGTTGGCTCACGTC 61.089 63.158 15.13 0.00 41.71 4.34
2669 5481 2.049063 GCTCGAGTTGGCTCACGT 60.049 61.111 15.13 0.00 41.71 4.49
2670 5482 2.811317 GGCTCGAGTTGGCTCACG 60.811 66.667 15.13 0.00 41.71 4.35
2671 5483 1.739562 CTGGCTCGAGTTGGCTCAC 60.740 63.158 15.13 0.00 41.71 3.51
2672 5484 2.659016 CTGGCTCGAGTTGGCTCA 59.341 61.111 15.13 2.92 41.71 4.26
2673 5485 2.817396 GCTGGCTCGAGTTGGCTC 60.817 66.667 15.13 0.00 38.35 4.70
2674 5486 3.308014 GAGCTGGCTCGAGTTGGCT 62.308 63.158 21.33 21.33 33.06 4.75
2675 5487 2.817396 GAGCTGGCTCGAGTTGGC 60.817 66.667 15.13 14.73 33.06 4.52
2695 5507 4.426112 GCTTTTGGCAGGCTCGGC 62.426 66.667 0.00 4.05 41.35 5.54
2696 5508 2.674380 AGCTTTTGGCAGGCTCGG 60.674 61.111 6.00 0.00 44.79 4.63
2697 5509 2.873288 GAGCTTTTGGCAGGCTCG 59.127 61.111 18.18 0.00 42.03 5.03
2698 5510 2.873288 CGAGCTTTTGGCAGGCTC 59.127 61.111 21.09 21.09 46.06 4.70
2699 5511 3.368571 GCGAGCTTTTGGCAGGCT 61.369 61.111 10.55 10.55 44.79 4.58
2700 5512 4.426112 GGCGAGCTTTTGGCAGGC 62.426 66.667 0.00 0.00 44.79 4.85
2701 5513 4.107051 CGGCGAGCTTTTGGCAGG 62.107 66.667 0.00 0.00 44.79 4.85
2702 5514 2.786564 GAACGGCGAGCTTTTGGCAG 62.787 60.000 16.62 4.35 44.79 4.85
2703 5515 2.903547 GAACGGCGAGCTTTTGGCA 61.904 57.895 16.62 0.00 44.79 4.92
2704 5516 2.126850 GAACGGCGAGCTTTTGGC 60.127 61.111 16.62 0.00 42.19 4.52
2705 5517 1.912371 GAGGAACGGCGAGCTTTTGG 61.912 60.000 16.62 0.00 0.00 3.28
2706 5518 1.497722 GAGGAACGGCGAGCTTTTG 59.502 57.895 16.62 0.00 0.00 2.44
2707 5519 2.027625 CGAGGAACGGCGAGCTTTT 61.028 57.895 16.62 0.00 38.46 2.27
2708 5520 2.432628 CGAGGAACGGCGAGCTTT 60.433 61.111 16.62 0.00 38.46 3.51
2727 5539 4.443266 AGCTTGGCTCGACTCGGC 62.443 66.667 0.00 1.17 30.62 5.54
2728 5540 2.202676 GAGCTTGGCTCGACTCGG 60.203 66.667 3.74 0.00 45.85 4.63
2742 5554 3.267860 CTCGCCGGAGCATTGAGC 61.268 66.667 5.05 0.00 46.19 4.26
2750 5562 2.047274 TTTTGAGGCTCGCCGGAG 60.047 61.111 5.05 0.00 43.46 4.63
2751 5563 2.358247 GTTTTGAGGCTCGCCGGA 60.358 61.111 5.05 0.00 41.95 5.14
2752 5564 3.788766 CGTTTTGAGGCTCGCCGG 61.789 66.667 10.42 0.00 41.95 6.13
2753 5565 3.788766 CCGTTTTGAGGCTCGCCG 61.789 66.667 10.42 8.75 41.95 6.46
2754 5566 2.358247 TCCGTTTTGAGGCTCGCC 60.358 61.111 10.42 0.00 0.00 5.54
2755 5567 3.028366 GCTCCGTTTTGAGGCTCGC 62.028 63.158 10.42 0.23 32.81 5.03
2756 5568 1.355066 GAGCTCCGTTTTGAGGCTCG 61.355 60.000 10.42 0.00 31.09 5.03
2757 5569 1.355066 CGAGCTCCGTTTTGAGGCTC 61.355 60.000 8.47 7.79 34.75 4.70
2758 5570 1.374758 CGAGCTCCGTTTTGAGGCT 60.375 57.895 8.47 0.00 32.81 4.58
2759 5571 1.374252 TCGAGCTCCGTTTTGAGGC 60.374 57.895 8.47 0.00 39.75 4.70
2760 5572 1.014564 GGTCGAGCTCCGTTTTGAGG 61.015 60.000 8.47 0.00 39.75 3.86
2761 5573 1.014564 GGGTCGAGCTCCGTTTTGAG 61.015 60.000 15.18 0.00 39.75 3.02
2762 5574 1.005394 GGGTCGAGCTCCGTTTTGA 60.005 57.895 15.18 0.00 39.75 2.69
2763 5575 2.380410 CGGGTCGAGCTCCGTTTTG 61.380 63.158 15.18 0.00 41.23 2.44
2764 5576 2.048503 CGGGTCGAGCTCCGTTTT 60.049 61.111 15.18 0.00 41.23 2.43
2765 5577 4.065281 CCGGGTCGAGCTCCGTTT 62.065 66.667 15.18 0.00 44.32 3.60
2770 5582 4.083862 AAAGCCCGGGTCGAGCTC 62.084 66.667 24.63 2.73 35.30 4.09
2771 5583 4.394712 CAAAGCCCGGGTCGAGCT 62.395 66.667 24.63 9.69 38.88 4.09
2783 5595 2.109126 CACCGAGCTAGGGCAAAGC 61.109 63.158 17.90 2.35 41.70 3.51
2784 5596 2.109126 GCACCGAGCTAGGGCAAAG 61.109 63.158 17.90 2.88 41.70 2.77
2785 5597 2.046314 GCACCGAGCTAGGGCAAA 60.046 61.111 17.90 0.00 41.70 3.68
2786 5598 3.315142 CTGCACCGAGCTAGGGCAA 62.315 63.158 22.44 11.60 45.94 4.52
2787 5599 3.774528 CTGCACCGAGCTAGGGCA 61.775 66.667 21.45 21.45 45.94 5.36
2789 5601 3.099211 ATGCTGCACCGAGCTAGGG 62.099 63.158 17.90 9.78 45.94 3.53
2790 5602 1.886313 CATGCTGCACCGAGCTAGG 60.886 63.158 11.86 11.86 45.94 3.02
2791 5603 1.886313 CCATGCTGCACCGAGCTAG 60.886 63.158 3.57 0.00 45.94 3.42
2792 5604 2.187685 CCATGCTGCACCGAGCTA 59.812 61.111 3.57 0.00 45.94 3.32
2795 5607 3.506096 CTGCCATGCTGCACCGAG 61.506 66.667 3.57 0.00 36.04 4.63
2799 5611 3.823330 GAGCCTGCCATGCTGCAC 61.823 66.667 3.57 0.00 39.69 4.57
2819 5631 2.974489 CTTGGAGCACGCAGGCTTG 61.974 63.158 0.17 0.00 45.99 4.01
2820 5632 2.670934 CTTGGAGCACGCAGGCTT 60.671 61.111 0.17 0.00 45.99 4.35
2822 5634 3.426568 GACTTGGAGCACGCAGGC 61.427 66.667 0.00 0.00 0.00 4.85
2823 5635 2.031012 TGACTTGGAGCACGCAGG 59.969 61.111 0.00 0.00 0.00 4.85
2824 5636 1.301244 AGTGACTTGGAGCACGCAG 60.301 57.895 0.00 0.00 39.88 5.18
2825 5637 1.595109 CAGTGACTTGGAGCACGCA 60.595 57.895 0.00 0.00 39.88 5.24
2826 5638 2.959357 GCAGTGACTTGGAGCACGC 61.959 63.158 0.00 0.00 39.88 5.34
2827 5639 2.320587 GGCAGTGACTTGGAGCACG 61.321 63.158 0.00 0.00 39.88 5.34
2828 5640 0.607489 ATGGCAGTGACTTGGAGCAC 60.607 55.000 0.00 0.00 35.30 4.40
2829 5641 0.607217 CATGGCAGTGACTTGGAGCA 60.607 55.000 3.88 0.00 0.00 4.26
2830 5642 0.607489 ACATGGCAGTGACTTGGAGC 60.607 55.000 15.77 0.00 0.00 4.70
2831 5643 1.162698 CACATGGCAGTGACTTGGAG 58.837 55.000 15.77 4.76 42.05 3.86
2832 5644 0.250858 CCACATGGCAGTGACTTGGA 60.251 55.000 15.77 0.00 42.05 3.53
2833 5645 1.246056 CCCACATGGCAGTGACTTGG 61.246 60.000 15.77 10.26 42.05 3.61
2834 5646 0.250858 TCCCACATGGCAGTGACTTG 60.251 55.000 10.25 10.25 42.05 3.16
2835 5647 0.037303 CTCCCACATGGCAGTGACTT 59.963 55.000 15.61 0.00 42.05 3.01
2836 5648 1.681666 CTCCCACATGGCAGTGACT 59.318 57.895 15.61 0.00 42.05 3.41
2837 5649 2.042831 GCTCCCACATGGCAGTGAC 61.043 63.158 15.61 0.00 42.05 3.67
2838 5650 2.352422 GCTCCCACATGGCAGTGA 59.648 61.111 15.61 0.39 42.05 3.41
2839 5651 3.129502 CGCTCCCACATGGCAGTG 61.130 66.667 0.00 9.29 39.21 3.66
2844 5656 3.803082 CAACGCGCTCCCACATGG 61.803 66.667 5.73 0.00 0.00 3.66
2845 5657 2.741985 TCAACGCGCTCCCACATG 60.742 61.111 5.73 0.00 0.00 3.21
2846 5658 2.434884 CTCAACGCGCTCCCACAT 60.435 61.111 5.73 0.00 0.00 3.21
2847 5659 3.923864 ACTCAACGCGCTCCCACA 61.924 61.111 5.73 0.00 0.00 4.17
2862 5674 0.742281 CAGCTAACTCCATGCGCACT 60.742 55.000 14.90 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.