Multiple sequence alignment - TraesCS7B01G494800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G494800 chr7B 100.000 3179 0 0 1 3179 746171653 746174831 0.000000e+00 5871.0
1 TraesCS7B01G494800 chr7B 95.845 2214 65 13 829 3037 747331918 747334109 0.000000e+00 3554.0
2 TraesCS7B01G494800 chr7B 85.517 1374 172 13 974 2323 747235313 747236683 0.000000e+00 1410.0
3 TraesCS7B01G494800 chr7B 85.309 1375 176 11 970 2323 748501891 748503260 0.000000e+00 1397.0
4 TraesCS7B01G494800 chr7B 84.526 1383 175 14 970 2323 746424196 746422824 0.000000e+00 1332.0
5 TraesCS7B01G494800 chr7B 85.886 1162 161 2 974 2132 747839816 747838655 0.000000e+00 1234.0
6 TraesCS7B01G494800 chr7B 83.528 941 122 8 1410 2323 694892048 694892982 0.000000e+00 848.0
7 TraesCS7B01G494800 chr7B 79.700 1133 208 13 1001 2131 749162828 749161716 0.000000e+00 798.0
8 TraesCS7B01G494800 chr7B 83.882 608 70 13 1737 2317 745661677 745661071 3.580000e-154 555.0
9 TraesCS7B01G494800 chr7B 82.927 615 60 20 2418 3029 694892966 694893538 2.190000e-141 512.0
10 TraesCS7B01G494800 chr7B 81.699 612 70 25 2418 3023 748503244 748503819 3.710000e-129 472.0
11 TraesCS7B01G494800 chr7B 81.639 610 57 24 2418 3023 747236667 747237225 3.740000e-124 455.0
12 TraesCS7B01G494800 chr7B 85.211 426 39 10 833 1253 746305247 746305653 1.760000e-112 416.0
13 TraesCS7B01G494800 chr7B 83.051 472 54 19 228 686 746304645 746305103 3.820000e-109 405.0
14 TraesCS7B01G494800 chr7B 81.356 354 26 18 2687 3036 746422361 746422044 5.260000e-63 252.0
15 TraesCS7B01G494800 chr7B 82.051 312 36 10 228 537 747840441 747840148 6.810000e-62 248.0
16 TraesCS7B01G494800 chr7B 83.099 213 33 2 378 588 694889284 694889495 1.160000e-44 191.0
17 TraesCS7B01G494800 chr7B 89.865 148 15 0 3032 3179 747339243 747339390 1.160000e-44 191.0
18 TraesCS7B01G494800 chr7B 86.420 162 13 5 3 159 750214263 750214106 5.450000e-38 169.0
19 TraesCS7B01G494800 chr7B 90.625 64 3 3 2349 2411 742470251 742470312 7.310000e-12 82.4
20 TraesCS7B01G494800 chr7B 89.831 59 6 0 2352 2410 125361422 125361364 3.400000e-10 76.8
21 TraesCS7B01G494800 chrUn 90.909 594 49 4 2418 3009 427906198 427906788 0.000000e+00 793.0
22 TraesCS7B01G494800 chrUn 87.476 519 58 5 1460 1975 474629392 474629906 2.730000e-165 592.0
23 TraesCS7B01G494800 chrUn 92.070 227 16 2 2784 3009 369084242 369084017 5.120000e-83 318.0
24 TraesCS7B01G494800 chrUn 93.827 81 5 0 190 270 319027951 319028031 4.310000e-24 122.0
25 TraesCS7B01G494800 chrUn 93.827 81 5 0 190 270 350240161 350240081 4.310000e-24 122.0
26 TraesCS7B01G494800 chrUn 93.827 81 5 0 190 270 412481114 412481034 4.310000e-24 122.0
27 TraesCS7B01G494800 chrUn 93.827 81 5 0 190 270 439063776 439063856 4.310000e-24 122.0
28 TraesCS7B01G494800 chrUn 92.593 81 6 0 190 270 244855932 244855852 2.000000e-22 117.0
29 TraesCS7B01G494800 chrUn 89.831 59 5 1 2352 2410 298565270 298565327 1.220000e-09 75.0
30 TraesCS7B01G494800 chrUn 100.000 29 0 0 539 567 244855543 244855515 2.000000e-03 54.7
31 TraesCS7B01G494800 chrUn 100.000 29 0 0 539 567 319028340 319028368 2.000000e-03 54.7
32 TraesCS7B01G494800 chrUn 100.000 29 0 0 539 567 350239772 350239744 2.000000e-03 54.7
33 TraesCS7B01G494800 chrUn 100.000 29 0 0 539 567 412480725 412480697 2.000000e-03 54.7
34 TraesCS7B01G494800 chrUn 100.000 29 0 0 539 567 439064165 439064193 2.000000e-03 54.7
35 TraesCS7B01G494800 chr7A 87.859 626 56 16 2418 3036 734547468 734546856 0.000000e+00 717.0
36 TraesCS7B01G494800 chr7A 77.151 1081 231 12 1038 2110 736307597 736306525 5.830000e-172 614.0
37 TraesCS7B01G494800 chr7A 85.025 601 70 4 1271 1871 734551881 734551301 7.590000e-166 593.0
38 TraesCS7B01G494800 chr7A 88.063 444 39 7 1863 2305 734549337 734548907 6.080000e-142 514.0
39 TraesCS7B01G494800 chr7A 86.857 175 22 1 1064 1238 734552057 734551884 9.000000e-46 195.0
40 TraesCS7B01G494800 chr7A 81.818 88 12 4 2925 3012 735813078 735812995 1.580000e-08 71.3
41 TraesCS7B01G494800 chr7D 78.460 766 143 15 1039 1799 633017630 633018378 6.170000e-132 481.0
42 TraesCS7B01G494800 chr7D 81.739 230 42 0 1028 1257 632127498 632127727 3.240000e-45 193.0
43 TraesCS7B01G494800 chr7D 82.083 240 27 10 157 394 633158691 633158916 1.160000e-44 191.0
44 TraesCS7B01G494800 chr4D 90.278 144 14 0 3036 3179 135923415 135923558 4.190000e-44 189.0
45 TraesCS7B01G494800 chr4D 90.210 143 14 0 3037 3179 294087747 294087889 1.510000e-43 187.0
46 TraesCS7B01G494800 chr4D 85.185 81 9 3 2333 2410 118238504 118238424 2.630000e-11 80.5
47 TraesCS7B01G494800 chr3D 90.278 144 14 0 3036 3179 539735376 539735519 4.190000e-44 189.0
48 TraesCS7B01G494800 chr3D 88.435 147 17 0 3033 3179 195798999 195799145 9.060000e-41 178.0
49 TraesCS7B01G494800 chr3D 87.821 156 13 4 3 156 565988581 565988430 9.060000e-41 178.0
50 TraesCS7B01G494800 chr2D 88.679 159 12 4 3 159 309068149 309068303 4.190000e-44 189.0
51 TraesCS7B01G494800 chr2D 88.333 60 5 2 2352 2410 380046703 380046645 1.580000e-08 71.3
52 TraesCS7B01G494800 chr6D 89.583 144 15 0 3036 3179 328108751 328108608 1.950000e-42 183.0
53 TraesCS7B01G494800 chr6D 89.510 143 15 0 3037 3179 82858134 82858276 7.000000e-42 182.0
54 TraesCS7B01G494800 chr6D 91.525 59 5 0 2352 2410 115682494 115682552 7.310000e-12 82.4
55 TraesCS7B01G494800 chr5D 89.583 144 15 0 3036 3179 137861888 137861745 1.950000e-42 183.0
56 TraesCS7B01G494800 chr5D 89.510 143 15 0 3037 3179 413054530 413054388 7.000000e-42 182.0
57 TraesCS7B01G494800 chr5D 91.379 58 4 1 2353 2409 221882641 221882584 9.450000e-11 78.7
58 TraesCS7B01G494800 chr4A 88.462 156 12 4 3 156 655654453 655654302 1.950000e-42 183.0
59 TraesCS7B01G494800 chr4A 85.632 174 17 5 3 172 731087744 731087575 3.260000e-40 176.0
60 TraesCS7B01G494800 chr4A 91.667 60 2 3 2352 2410 602285485 602285542 2.630000e-11 80.5
61 TraesCS7B01G494800 chr6B 87.421 159 12 4 3 157 11555758 11555912 3.260000e-40 176.0
62 TraesCS7B01G494800 chr6B 84.568 162 18 4 3 160 5726687 5726529 1.530000e-33 154.0
63 TraesCS7B01G494800 chr4B 86.076 158 15 5 3 158 554955475 554955627 2.540000e-36 163.0
64 TraesCS7B01G494800 chr2B 85.256 156 17 4 6 159 103925687 103925536 4.250000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G494800 chr7B 746171653 746174831 3178 False 5871.00 5871 100.000000 1 3179 1 chr7B.!!$F2 3178
1 TraesCS7B01G494800 chr7B 747331918 747334109 2191 False 3554.00 3554 95.845000 829 3037 1 chr7B.!!$F3 2208
2 TraesCS7B01G494800 chr7B 748501891 748503819 1928 False 934.50 1397 83.504000 970 3023 2 chr7B.!!$F8 2053
3 TraesCS7B01G494800 chr7B 747235313 747237225 1912 False 932.50 1410 83.578000 974 3023 2 chr7B.!!$F7 2049
4 TraesCS7B01G494800 chr7B 749161716 749162828 1112 True 798.00 798 79.700000 1001 2131 1 chr7B.!!$R3 1130
5 TraesCS7B01G494800 chr7B 746422044 746424196 2152 True 792.00 1332 82.941000 970 3036 2 chr7B.!!$R5 2066
6 TraesCS7B01G494800 chr7B 747838655 747840441 1786 True 741.00 1234 83.968500 228 2132 2 chr7B.!!$R6 1904
7 TraesCS7B01G494800 chr7B 745661071 745661677 606 True 555.00 555 83.882000 1737 2317 1 chr7B.!!$R2 580
8 TraesCS7B01G494800 chr7B 694889284 694893538 4254 False 517.00 848 83.184667 378 3029 3 chr7B.!!$F5 2651
9 TraesCS7B01G494800 chr7B 746304645 746305653 1008 False 410.50 416 84.131000 228 1253 2 chr7B.!!$F6 1025
10 TraesCS7B01G494800 chrUn 427906198 427906788 590 False 793.00 793 90.909000 2418 3009 1 chrUn.!!$F2 591
11 TraesCS7B01G494800 chrUn 474629392 474629906 514 False 592.00 592 87.476000 1460 1975 1 chrUn.!!$F3 515
12 TraesCS7B01G494800 chr7A 736306525 736307597 1072 True 614.00 614 77.151000 1038 2110 1 chr7A.!!$R2 1072
13 TraesCS7B01G494800 chr7A 734546856 734552057 5201 True 504.75 717 86.951000 1064 3036 4 chr7A.!!$R3 1972
14 TraesCS7B01G494800 chr7D 633017630 633018378 748 False 481.00 481 78.460000 1039 1799 1 chr7D.!!$F2 760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 337 0.038166 TGGCATTCACCCACCTCTTC 59.962 55.0 0.0 0.0 0.0 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 6733 2.036346 AGCAAACCAAGAATCAAGTGGC 59.964 45.455 0.0 0.0 35.72 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.797039 TCTACTTCGCTGATCCATTTGG 58.203 45.455 0.00 0.00 0.00 3.28
23 24 2.496899 ACTTCGCTGATCCATTTGGT 57.503 45.000 0.00 0.00 36.34 3.67
24 25 2.086869 ACTTCGCTGATCCATTTGGTG 58.913 47.619 0.00 0.00 36.34 4.17
25 26 2.086869 CTTCGCTGATCCATTTGGTGT 58.913 47.619 0.00 0.00 36.34 4.16
26 27 2.198827 TCGCTGATCCATTTGGTGTT 57.801 45.000 0.00 0.00 36.34 3.32
27 28 2.513753 TCGCTGATCCATTTGGTGTTT 58.486 42.857 0.00 0.00 36.34 2.83
28 29 2.487762 TCGCTGATCCATTTGGTGTTTC 59.512 45.455 0.00 0.00 36.34 2.78
29 30 2.728846 CGCTGATCCATTTGGTGTTTCG 60.729 50.000 0.00 0.00 36.34 3.46
30 31 2.228822 GCTGATCCATTTGGTGTTTCGT 59.771 45.455 0.00 0.00 36.34 3.85
31 32 3.305335 GCTGATCCATTTGGTGTTTCGTT 60.305 43.478 0.00 0.00 36.34 3.85
32 33 4.795962 GCTGATCCATTTGGTGTTTCGTTT 60.796 41.667 0.00 0.00 36.34 3.60
33 34 5.269505 TGATCCATTTGGTGTTTCGTTTT 57.730 34.783 0.00 0.00 36.34 2.43
34 35 5.665459 TGATCCATTTGGTGTTTCGTTTTT 58.335 33.333 0.00 0.00 36.34 1.94
55 56 3.325293 TTTTTCTTTTGGCTGTGTGCA 57.675 38.095 0.00 0.00 45.15 4.57
56 57 3.540314 TTTTCTTTTGGCTGTGTGCAT 57.460 38.095 0.00 0.00 45.15 3.96
57 58 2.798976 TTCTTTTGGCTGTGTGCATC 57.201 45.000 0.00 0.00 45.15 3.91
58 59 0.961019 TCTTTTGGCTGTGTGCATCC 59.039 50.000 0.00 0.00 45.15 3.51
59 60 0.963962 CTTTTGGCTGTGTGCATCCT 59.036 50.000 0.00 0.00 45.15 3.24
60 61 1.342174 CTTTTGGCTGTGTGCATCCTT 59.658 47.619 0.00 0.00 45.15 3.36
61 62 0.675083 TTTGGCTGTGTGCATCCTTG 59.325 50.000 0.00 0.00 45.15 3.61
62 63 0.178995 TTGGCTGTGTGCATCCTTGA 60.179 50.000 0.00 0.00 45.15 3.02
63 64 0.038599 TGGCTGTGTGCATCCTTGAT 59.961 50.000 0.00 0.00 45.15 2.57
64 65 0.454600 GGCTGTGTGCATCCTTGATG 59.545 55.000 0.00 0.00 45.15 3.07
65 66 1.171308 GCTGTGTGCATCCTTGATGT 58.829 50.000 6.01 0.00 41.60 3.06
66 67 1.131883 GCTGTGTGCATCCTTGATGTC 59.868 52.381 6.01 0.13 41.60 3.06
67 68 2.708051 CTGTGTGCATCCTTGATGTCT 58.292 47.619 6.01 0.00 41.60 3.41
68 69 2.676839 CTGTGTGCATCCTTGATGTCTC 59.323 50.000 6.01 1.43 41.60 3.36
69 70 1.662629 GTGTGCATCCTTGATGTCTCG 59.337 52.381 6.01 0.00 41.60 4.04
70 71 1.550072 TGTGCATCCTTGATGTCTCGA 59.450 47.619 6.01 0.00 41.60 4.04
71 72 1.929836 GTGCATCCTTGATGTCTCGAC 59.070 52.381 6.01 0.00 41.60 4.20
72 73 1.827344 TGCATCCTTGATGTCTCGACT 59.173 47.619 6.01 0.00 41.60 4.18
73 74 3.023832 TGCATCCTTGATGTCTCGACTA 58.976 45.455 6.01 0.00 41.60 2.59
74 75 3.067320 TGCATCCTTGATGTCTCGACTAG 59.933 47.826 6.01 0.00 41.60 2.57
75 76 3.637432 CATCCTTGATGTCTCGACTAGC 58.363 50.000 0.00 0.00 35.54 3.42
76 77 2.723273 TCCTTGATGTCTCGACTAGCA 58.277 47.619 0.00 0.00 0.00 3.49
77 78 2.423892 TCCTTGATGTCTCGACTAGCAC 59.576 50.000 0.00 0.00 0.00 4.40
78 79 2.425312 CCTTGATGTCTCGACTAGCACT 59.575 50.000 0.00 0.00 0.00 4.40
79 80 3.628032 CCTTGATGTCTCGACTAGCACTA 59.372 47.826 0.00 0.00 0.00 2.74
80 81 4.096532 CCTTGATGTCTCGACTAGCACTAA 59.903 45.833 0.00 0.00 0.00 2.24
81 82 5.221145 CCTTGATGTCTCGACTAGCACTAAT 60.221 44.000 0.00 0.00 0.00 1.73
82 83 5.836821 TGATGTCTCGACTAGCACTAATT 57.163 39.130 0.00 0.00 0.00 1.40
83 84 5.582550 TGATGTCTCGACTAGCACTAATTG 58.417 41.667 0.00 0.00 0.00 2.32
84 85 5.357032 TGATGTCTCGACTAGCACTAATTGA 59.643 40.000 0.00 0.00 0.00 2.57
85 86 4.982999 TGTCTCGACTAGCACTAATTGAC 58.017 43.478 0.00 0.00 0.00 3.18
86 87 4.457949 TGTCTCGACTAGCACTAATTGACA 59.542 41.667 0.00 0.00 0.00 3.58
87 88 5.125578 TGTCTCGACTAGCACTAATTGACAT 59.874 40.000 0.00 0.00 0.00 3.06
88 89 6.037098 GTCTCGACTAGCACTAATTGACATT 58.963 40.000 0.00 0.00 0.00 2.71
89 90 7.148137 TGTCTCGACTAGCACTAATTGACATTA 60.148 37.037 0.00 0.00 0.00 1.90
90 91 7.863375 GTCTCGACTAGCACTAATTGACATTAT 59.137 37.037 0.00 0.00 0.00 1.28
91 92 9.063615 TCTCGACTAGCACTAATTGACATTATA 57.936 33.333 0.00 0.00 0.00 0.98
92 93 9.847706 CTCGACTAGCACTAATTGACATTATAT 57.152 33.333 0.00 0.00 0.00 0.86
99 100 8.685427 AGCACTAATTGACATTATATTGTTGCA 58.315 29.630 15.35 0.00 0.00 4.08
100 101 8.961092 GCACTAATTGACATTATATTGTTGCAG 58.039 33.333 10.96 4.90 0.00 4.41
103 104 9.888878 CTAATTGACATTATATTGTTGCAGAGG 57.111 33.333 1.99 0.00 0.00 3.69
104 105 5.756195 TGACATTATATTGTTGCAGAGGC 57.244 39.130 1.99 0.00 41.68 4.70
105 106 4.580167 TGACATTATATTGTTGCAGAGGCC 59.420 41.667 0.00 0.00 40.13 5.19
106 107 3.565482 ACATTATATTGTTGCAGAGGCCG 59.435 43.478 0.00 0.00 40.13 6.13
107 108 2.254546 TATATTGTTGCAGAGGCCGG 57.745 50.000 0.00 0.00 40.13 6.13
108 109 0.466189 ATATTGTTGCAGAGGCCGGG 60.466 55.000 2.18 0.00 40.13 5.73
109 110 1.847798 TATTGTTGCAGAGGCCGGGT 61.848 55.000 2.18 0.00 40.13 5.28
110 111 3.993609 TATTGTTGCAGAGGCCGGGTG 62.994 57.143 2.18 0.00 40.13 4.61
111 112 4.643387 GTTGCAGAGGCCGGGTGT 62.643 66.667 2.18 0.00 40.13 4.16
112 113 2.925706 TTGCAGAGGCCGGGTGTA 60.926 61.111 2.18 0.00 40.13 2.90
113 114 2.521451 TTGCAGAGGCCGGGTGTAA 61.521 57.895 2.18 0.00 40.13 2.41
114 115 2.058125 TTGCAGAGGCCGGGTGTAAA 62.058 55.000 2.18 0.00 40.13 2.01
115 116 1.077716 GCAGAGGCCGGGTGTAAAT 60.078 57.895 2.18 0.00 0.00 1.40
116 117 1.376609 GCAGAGGCCGGGTGTAAATG 61.377 60.000 2.18 0.00 0.00 2.32
117 118 0.251916 CAGAGGCCGGGTGTAAATGA 59.748 55.000 2.18 0.00 0.00 2.57
118 119 1.134098 CAGAGGCCGGGTGTAAATGAT 60.134 52.381 2.18 0.00 0.00 2.45
119 120 2.104111 CAGAGGCCGGGTGTAAATGATA 59.896 50.000 2.18 0.00 0.00 2.15
120 121 2.979678 AGAGGCCGGGTGTAAATGATAT 59.020 45.455 2.18 0.00 0.00 1.63
121 122 3.008049 AGAGGCCGGGTGTAAATGATATC 59.992 47.826 2.18 0.00 0.00 1.63
122 123 2.039879 AGGCCGGGTGTAAATGATATCC 59.960 50.000 2.18 0.00 0.00 2.59
123 124 2.073816 GCCGGGTGTAAATGATATCCG 58.926 52.381 2.18 0.00 36.23 4.18
124 125 2.289195 GCCGGGTGTAAATGATATCCGA 60.289 50.000 2.18 0.00 38.42 4.55
125 126 3.618997 GCCGGGTGTAAATGATATCCGAT 60.619 47.826 2.18 0.00 38.42 4.18
126 127 4.575885 CCGGGTGTAAATGATATCCGATT 58.424 43.478 0.00 0.00 38.42 3.34
127 128 4.391830 CCGGGTGTAAATGATATCCGATTG 59.608 45.833 0.00 0.00 38.42 2.67
128 129 5.234752 CGGGTGTAAATGATATCCGATTGA 58.765 41.667 0.00 0.00 38.42 2.57
129 130 5.874810 CGGGTGTAAATGATATCCGATTGAT 59.125 40.000 0.00 0.00 38.42 2.57
130 131 7.039270 CGGGTGTAAATGATATCCGATTGATA 58.961 38.462 0.00 0.00 40.20 2.15
131 132 7.010183 CGGGTGTAAATGATATCCGATTGATAC 59.990 40.741 0.00 0.00 38.75 2.24
132 133 8.041323 GGGTGTAAATGATATCCGATTGATACT 58.959 37.037 0.00 0.00 38.75 2.12
163 164 8.839310 ATTCCCATTATCGAGAAAATGAGTAG 57.161 34.615 15.67 3.58 35.53 2.57
164 165 7.597288 TCCCATTATCGAGAAAATGAGTAGA 57.403 36.000 15.67 7.28 35.53 2.59
165 166 7.661968 TCCCATTATCGAGAAAATGAGTAGAG 58.338 38.462 15.67 2.80 35.53 2.43
166 167 6.367422 CCCATTATCGAGAAAATGAGTAGAGC 59.633 42.308 15.67 0.00 35.53 4.09
167 168 6.088749 CCATTATCGAGAAAATGAGTAGAGCG 59.911 42.308 15.67 0.00 35.53 5.03
168 169 3.422417 TCGAGAAAATGAGTAGAGCGG 57.578 47.619 0.00 0.00 0.00 5.52
169 170 3.014623 TCGAGAAAATGAGTAGAGCGGA 58.985 45.455 0.00 0.00 0.00 5.54
170 171 3.065510 TCGAGAAAATGAGTAGAGCGGAG 59.934 47.826 0.00 0.00 0.00 4.63
171 172 3.181495 CGAGAAAATGAGTAGAGCGGAGT 60.181 47.826 0.00 0.00 0.00 3.85
172 173 4.675671 CGAGAAAATGAGTAGAGCGGAGTT 60.676 45.833 0.00 0.00 0.00 3.01
173 174 5.153950 AGAAAATGAGTAGAGCGGAGTTT 57.846 39.130 0.00 0.00 0.00 2.66
174 175 4.932200 AGAAAATGAGTAGAGCGGAGTTTG 59.068 41.667 0.00 0.00 0.00 2.93
175 176 2.301577 ATGAGTAGAGCGGAGTTTGC 57.698 50.000 0.00 0.00 0.00 3.68
177 178 1.067565 TGAGTAGAGCGGAGTTTGCTG 60.068 52.381 0.00 0.00 44.18 4.41
178 179 0.969894 AGTAGAGCGGAGTTTGCTGT 59.030 50.000 0.00 0.00 44.18 4.40
179 180 1.344763 AGTAGAGCGGAGTTTGCTGTT 59.655 47.619 0.00 0.00 44.18 3.16
180 181 2.561419 AGTAGAGCGGAGTTTGCTGTTA 59.439 45.455 0.00 0.00 44.18 2.41
181 182 2.770164 AGAGCGGAGTTTGCTGTTAT 57.230 45.000 0.00 0.00 44.18 1.89
182 183 2.350522 AGAGCGGAGTTTGCTGTTATG 58.649 47.619 0.00 0.00 44.18 1.90
183 184 1.398390 GAGCGGAGTTTGCTGTTATGG 59.602 52.381 0.00 0.00 44.18 2.74
184 185 1.165270 GCGGAGTTTGCTGTTATGGT 58.835 50.000 0.00 0.00 0.00 3.55
185 186 2.027561 AGCGGAGTTTGCTGTTATGGTA 60.028 45.455 0.00 0.00 42.14 3.25
186 187 2.943033 GCGGAGTTTGCTGTTATGGTAT 59.057 45.455 0.00 0.00 0.00 2.73
187 188 3.242739 GCGGAGTTTGCTGTTATGGTATG 60.243 47.826 0.00 0.00 0.00 2.39
188 189 3.938963 CGGAGTTTGCTGTTATGGTATGT 59.061 43.478 0.00 0.00 0.00 2.29
189 190 4.201812 CGGAGTTTGCTGTTATGGTATGTG 60.202 45.833 0.00 0.00 0.00 3.21
190 191 4.700213 GGAGTTTGCTGTTATGGTATGTGT 59.300 41.667 0.00 0.00 0.00 3.72
191 192 5.183140 GGAGTTTGCTGTTATGGTATGTGTT 59.817 40.000 0.00 0.00 0.00 3.32
192 193 6.294508 GGAGTTTGCTGTTATGGTATGTGTTT 60.295 38.462 0.00 0.00 0.00 2.83
193 194 7.094549 GGAGTTTGCTGTTATGGTATGTGTTTA 60.095 37.037 0.00 0.00 0.00 2.01
194 195 7.816640 AGTTTGCTGTTATGGTATGTGTTTAG 58.183 34.615 0.00 0.00 0.00 1.85
195 196 6.751514 TTGCTGTTATGGTATGTGTTTAGG 57.248 37.500 0.00 0.00 0.00 2.69
196 197 4.638421 TGCTGTTATGGTATGTGTTTAGGC 59.362 41.667 0.00 0.00 0.00 3.93
197 198 4.638421 GCTGTTATGGTATGTGTTTAGGCA 59.362 41.667 0.00 0.00 0.00 4.75
198 199 5.299279 GCTGTTATGGTATGTGTTTAGGCAT 59.701 40.000 0.00 0.00 0.00 4.40
199 200 6.691754 TGTTATGGTATGTGTTTAGGCATG 57.308 37.500 0.00 0.00 0.00 4.06
200 201 6.418946 TGTTATGGTATGTGTTTAGGCATGA 58.581 36.000 0.00 0.00 0.00 3.07
201 202 7.059788 TGTTATGGTATGTGTTTAGGCATGAT 58.940 34.615 0.00 0.00 0.00 2.45
202 203 7.559533 TGTTATGGTATGTGTTTAGGCATGATT 59.440 33.333 0.00 0.00 0.00 2.57
203 204 9.062524 GTTATGGTATGTGTTTAGGCATGATTA 57.937 33.333 0.00 0.00 0.00 1.75
204 205 9.634021 TTATGGTATGTGTTTAGGCATGATTAA 57.366 29.630 0.00 0.00 0.00 1.40
205 206 7.566760 TGGTATGTGTTTAGGCATGATTAAG 57.433 36.000 0.00 0.00 0.00 1.85
206 207 7.342581 TGGTATGTGTTTAGGCATGATTAAGA 58.657 34.615 0.00 0.00 0.00 2.10
207 208 7.998383 TGGTATGTGTTTAGGCATGATTAAGAT 59.002 33.333 0.00 0.00 0.00 2.40
208 209 8.850156 GGTATGTGTTTAGGCATGATTAAGATT 58.150 33.333 0.00 0.00 0.00 2.40
209 210 9.884465 GTATGTGTTTAGGCATGATTAAGATTC 57.116 33.333 0.00 0.00 0.00 2.52
210 211 7.936496 TGTGTTTAGGCATGATTAAGATTCA 57.064 32.000 0.00 0.00 0.00 2.57
211 212 7.988737 TGTGTTTAGGCATGATTAAGATTCAG 58.011 34.615 0.00 0.00 0.00 3.02
212 213 7.611467 TGTGTTTAGGCATGATTAAGATTCAGT 59.389 33.333 0.00 0.00 0.00 3.41
213 214 8.462016 GTGTTTAGGCATGATTAAGATTCAGTT 58.538 33.333 0.00 0.00 0.00 3.16
214 215 8.461222 TGTTTAGGCATGATTAAGATTCAGTTG 58.539 33.333 0.00 0.00 0.00 3.16
215 216 8.462016 GTTTAGGCATGATTAAGATTCAGTTGT 58.538 33.333 0.00 0.00 0.00 3.32
216 217 9.679661 TTTAGGCATGATTAAGATTCAGTTGTA 57.320 29.630 0.00 0.00 0.00 2.41
217 218 7.798596 AGGCATGATTAAGATTCAGTTGTAG 57.201 36.000 0.00 0.00 0.00 2.74
218 219 6.261826 AGGCATGATTAAGATTCAGTTGTAGC 59.738 38.462 0.00 0.00 0.00 3.58
219 220 6.038603 GGCATGATTAAGATTCAGTTGTAGCA 59.961 38.462 0.00 0.00 0.00 3.49
220 221 7.130917 GCATGATTAAGATTCAGTTGTAGCAG 58.869 38.462 0.00 0.00 0.00 4.24
221 222 7.011763 GCATGATTAAGATTCAGTTGTAGCAGA 59.988 37.037 0.00 0.00 0.00 4.26
222 223 9.053840 CATGATTAAGATTCAGTTGTAGCAGAT 57.946 33.333 0.00 0.00 0.00 2.90
223 224 8.429493 TGATTAAGATTCAGTTGTAGCAGATG 57.571 34.615 0.00 0.00 0.00 2.90
224 225 7.496920 TGATTAAGATTCAGTTGTAGCAGATGG 59.503 37.037 0.00 0.00 0.00 3.51
225 226 4.833478 AGATTCAGTTGTAGCAGATGGT 57.167 40.909 0.00 0.00 0.00 3.55
226 227 4.764172 AGATTCAGTTGTAGCAGATGGTC 58.236 43.478 0.00 0.00 0.00 4.02
237 238 4.970860 AGCAGATGGTCTGTATGCTTAT 57.029 40.909 8.58 0.00 45.94 1.73
246 247 5.157781 GGTCTGTATGCTTATAGAAGAGCG 58.842 45.833 0.11 0.00 41.75 5.03
276 277 4.077108 AGAGATGACAGTGGTACGTGTAA 58.923 43.478 0.00 0.00 0.00 2.41
286 287 6.154445 CAGTGGTACGTGTAATAGAGTGTTT 58.846 40.000 0.00 0.00 0.00 2.83
288 289 6.865205 AGTGGTACGTGTAATAGAGTGTTTTC 59.135 38.462 0.00 0.00 0.00 2.29
291 292 7.086376 GGTACGTGTAATAGAGTGTTTTCTGA 58.914 38.462 0.00 0.00 0.00 3.27
296 297 8.587950 CGTGTAATAGAGTGTTTTCTGAGATTC 58.412 37.037 0.00 0.00 0.00 2.52
328 329 3.763897 ACTAACTGATTTGGCATTCACCC 59.236 43.478 0.00 0.00 0.00 4.61
332 333 1.203162 TGATTTGGCATTCACCCACCT 60.203 47.619 0.00 0.00 30.65 4.00
334 335 0.482446 TTTGGCATTCACCCACCTCT 59.518 50.000 0.00 0.00 30.65 3.69
335 336 0.482446 TTGGCATTCACCCACCTCTT 59.518 50.000 0.00 0.00 30.65 2.85
336 337 0.038166 TGGCATTCACCCACCTCTTC 59.962 55.000 0.00 0.00 0.00 2.87
337 338 0.329596 GGCATTCACCCACCTCTTCT 59.670 55.000 0.00 0.00 0.00 2.85
338 339 1.272147 GGCATTCACCCACCTCTTCTT 60.272 52.381 0.00 0.00 0.00 2.52
347 348 2.089980 CCACCTCTTCTTGGATGCAAG 58.910 52.381 20.04 20.04 34.46 4.01
348 349 2.290514 CCACCTCTTCTTGGATGCAAGA 60.291 50.000 24.06 24.06 39.21 3.02
351 352 4.077822 ACCTCTTCTTGGATGCAAGAAAG 58.922 43.478 33.22 29.29 46.57 2.62
359 360 3.843422 TGGATGCAAGAAAGGAAGGAAA 58.157 40.909 0.00 0.00 0.00 3.13
369 370 1.481871 AGGAAGGAAATGCATGCAGG 58.518 50.000 26.69 0.00 0.00 4.85
375 376 0.396139 GAAATGCATGCAGGGGAGGA 60.396 55.000 26.69 0.00 0.00 3.71
376 377 0.685458 AAATGCATGCAGGGGAGGAC 60.685 55.000 26.69 0.00 0.00 3.85
409 410 2.851195 CTACAGGCACAGAGTTGGTTT 58.149 47.619 0.00 0.00 0.00 3.27
413 414 2.808543 CAGGCACAGAGTTGGTTTAGAC 59.191 50.000 0.00 0.00 0.00 2.59
414 415 2.706190 AGGCACAGAGTTGGTTTAGACT 59.294 45.455 0.00 0.00 0.00 3.24
421 422 6.708054 CACAGAGTTGGTTTAGACTTTCAGAT 59.292 38.462 0.00 0.00 0.00 2.90
426 427 9.924650 GAGTTGGTTTAGACTTTCAGATTAGTA 57.075 33.333 0.00 0.00 0.00 1.82
445 446 1.620822 AAGTGATCCAACACCTTGGC 58.379 50.000 0.00 0.00 46.15 4.52
449 450 1.144708 TGATCCAACACCTTGGCTCAA 59.855 47.619 4.00 0.00 45.59 3.02
455 456 3.369366 CCAACACCTTGGCTCAAACTTTT 60.369 43.478 0.00 0.00 40.79 2.27
458 459 5.006153 ACACCTTGGCTCAAACTTTTAAC 57.994 39.130 0.00 0.00 0.00 2.01
482 483 4.034394 CCAGATCATACATCAACAACACGG 59.966 45.833 0.00 0.00 0.00 4.94
499 500 7.422399 ACAACACGGATTGGCATTATTATTAC 58.578 34.615 5.97 0.00 33.63 1.89
501 502 7.202016 ACACGGATTGGCATTATTATTACTG 57.798 36.000 0.00 0.00 0.00 2.74
504 505 8.779303 CACGGATTGGCATTATTATTACTGTAA 58.221 33.333 2.26 2.26 0.00 2.41
505 506 8.999431 ACGGATTGGCATTATTATTACTGTAAG 58.001 33.333 6.40 0.00 42.29 2.34
588 603 7.174946 GTGTCTGGGAAAAGAAATTAGTGATGA 59.825 37.037 0.00 0.00 0.00 2.92
590 611 8.023706 GTCTGGGAAAAGAAATTAGTGATGAAC 58.976 37.037 0.00 0.00 0.00 3.18
599 620 8.012957 AGAAATTAGTGATGAACCTATCGTCT 57.987 34.615 0.01 0.00 43.35 4.18
612 633 7.233553 TGAACCTATCGTCTAAATGATGGATCT 59.766 37.037 0.00 0.00 32.59 2.75
613 634 7.164230 ACCTATCGTCTAAATGATGGATCTC 57.836 40.000 0.00 0.00 32.59 2.75
614 635 6.951198 ACCTATCGTCTAAATGATGGATCTCT 59.049 38.462 0.00 0.00 32.59 3.10
617 638 6.090483 TCGTCTAAATGATGGATCTCTTCC 57.910 41.667 0.00 0.00 45.69 3.46
619 640 6.015856 TCGTCTAAATGATGGATCTCTTCCTC 60.016 42.308 0.00 0.00 45.68 3.71
624 645 3.843422 TGATGGATCTCTTCCTCCTCTC 58.157 50.000 0.00 0.00 45.68 3.20
634 655 1.521010 CCTCCTCTCGTGCTGCATG 60.521 63.158 15.59 15.59 0.00 4.06
651 2950 4.238761 GCATGCTGCATATGAGTGATTT 57.761 40.909 15.78 0.00 44.26 2.17
686 2985 3.127203 CGACTAGTGTCCCAGAAGTACTG 59.873 52.174 0.00 0.00 39.94 2.74
687 2986 2.826725 ACTAGTGTCCCAGAAGTACTGC 59.173 50.000 0.00 0.00 44.52 4.40
688 2987 1.717032 AGTGTCCCAGAAGTACTGCA 58.283 50.000 3.00 0.00 44.52 4.41
698 3042 1.740025 GAAGTACTGCATGGAGGTTGC 59.260 52.381 19.22 1.97 40.55 4.17
720 3091 0.764890 TGTTCAGGGACCAACTGGAG 59.235 55.000 1.86 0.00 38.94 3.86
792 3206 1.527696 CGAGCAATGTTTCGTGATGC 58.472 50.000 2.10 0.00 37.28 3.91
793 3207 1.527696 GAGCAATGTTTCGTGATGCG 58.472 50.000 0.00 0.00 41.72 4.73
801 3215 2.166130 TTTCGTGATGCGGCCTCTGA 62.166 55.000 0.00 2.43 41.72 3.27
802 3216 2.563050 TTCGTGATGCGGCCTCTGAG 62.563 60.000 0.00 0.00 41.72 3.35
803 3217 2.202987 GTGATGCGGCCTCTGAGG 60.203 66.667 19.55 19.55 38.80 3.86
842 3256 1.272807 TAAGCGAAGTGGGCCTAGTT 58.727 50.000 9.26 9.26 0.00 2.24
866 3280 2.723746 GCCCAATGCTGCCATACG 59.276 61.111 0.00 0.00 36.87 3.06
867 3281 1.823470 GCCCAATGCTGCCATACGA 60.823 57.895 0.00 0.00 36.87 3.43
870 3284 1.667236 CCAATGCTGCCATACGAGAA 58.333 50.000 0.00 0.00 0.00 2.87
875 3289 1.337354 TGCTGCCATACGAGAACGAAA 60.337 47.619 0.00 0.00 42.66 3.46
919 3333 2.168728 GTCAGCCTCCAACCCTAGTAAG 59.831 54.545 0.00 0.00 0.00 2.34
920 3334 2.188817 CAGCCTCCAACCCTAGTAAGT 58.811 52.381 0.00 0.00 0.00 2.24
921 3335 3.012047 TCAGCCTCCAACCCTAGTAAGTA 59.988 47.826 0.00 0.00 0.00 2.24
922 3336 3.385111 CAGCCTCCAACCCTAGTAAGTAG 59.615 52.174 0.00 0.00 0.00 2.57
923 3337 3.271490 AGCCTCCAACCCTAGTAAGTAGA 59.729 47.826 0.00 0.00 0.00 2.59
924 3338 4.028825 GCCTCCAACCCTAGTAAGTAGAA 58.971 47.826 0.00 0.00 0.00 2.10
925 3339 4.654724 GCCTCCAACCCTAGTAAGTAGAAT 59.345 45.833 0.00 0.00 0.00 2.40
927 3341 6.015265 GCCTCCAACCCTAGTAAGTAGAATAG 60.015 46.154 0.00 0.00 0.00 1.73
928 3342 7.296098 CCTCCAACCCTAGTAAGTAGAATAGA 58.704 42.308 0.00 0.00 0.00 1.98
929 3343 7.783596 CCTCCAACCCTAGTAAGTAGAATAGAA 59.216 40.741 0.00 0.00 0.00 2.10
931 3345 8.117956 TCCAACCCTAGTAAGTAGAATAGAACA 58.882 37.037 0.00 0.00 0.00 3.18
950 3381 2.333701 AAACGACGCCTCCAACCCTT 62.334 55.000 0.00 0.00 0.00 3.95
2174 6635 5.470368 TGCTCGAATACCATTGCTAGATAC 58.530 41.667 0.00 0.00 0.00 2.24
2292 6758 5.738783 GCCACTTGATTCTTGGTTTGCTAAA 60.739 40.000 0.00 0.00 32.50 1.85
2295 6761 7.116805 CCACTTGATTCTTGGTTTGCTAAATTC 59.883 37.037 0.00 0.00 0.00 2.17
2306 8209 9.988815 TTGGTTTGCTAAATTCAAAAGCTTATA 57.011 25.926 0.00 0.00 35.49 0.98
2307 8210 9.638239 TGGTTTGCTAAATTCAAAAGCTTATAG 57.362 29.630 0.00 0.00 35.49 1.31
2308 8211 8.595533 GGTTTGCTAAATTCAAAAGCTTATAGC 58.404 33.333 0.00 6.49 42.84 2.97
2309 8212 8.595533 GTTTGCTAAATTCAAAAGCTTATAGCC 58.404 33.333 0.00 0.00 43.77 3.93
2310 8213 7.645058 TGCTAAATTCAAAAGCTTATAGCCT 57.355 32.000 0.00 0.00 43.77 4.58
2311 8214 7.707104 TGCTAAATTCAAAAGCTTATAGCCTC 58.293 34.615 0.00 0.00 43.77 4.70
2312 8215 7.142021 GCTAAATTCAAAAGCTTATAGCCTCC 58.858 38.462 0.00 0.00 43.77 4.30
2313 8216 7.013750 GCTAAATTCAAAAGCTTATAGCCTCCT 59.986 37.037 0.00 0.00 43.77 3.69
2314 8217 7.724490 AAATTCAAAAGCTTATAGCCTCCTT 57.276 32.000 0.00 0.00 43.77 3.36
2315 8218 7.724490 AATTCAAAAGCTTATAGCCTCCTTT 57.276 32.000 0.00 0.00 43.77 3.11
2316 8219 7.724490 ATTCAAAAGCTTATAGCCTCCTTTT 57.276 32.000 0.00 0.00 43.77 2.27
2317 8220 6.759497 TCAAAAGCTTATAGCCTCCTTTTC 57.241 37.500 0.00 0.00 43.77 2.29
2318 8221 6.245408 TCAAAAGCTTATAGCCTCCTTTTCA 58.755 36.000 0.00 0.00 43.77 2.69
2319 8222 6.891908 TCAAAAGCTTATAGCCTCCTTTTCAT 59.108 34.615 0.00 0.00 43.77 2.57
2320 8223 7.397192 TCAAAAGCTTATAGCCTCCTTTTCATT 59.603 33.333 0.00 0.00 43.77 2.57
2321 8224 6.705863 AAGCTTATAGCCTCCTTTTCATTG 57.294 37.500 0.00 0.00 43.77 2.82
2322 8225 4.582240 AGCTTATAGCCTCCTTTTCATTGC 59.418 41.667 0.00 0.00 43.77 3.56
2323 8226 4.582240 GCTTATAGCCTCCTTTTCATTGCT 59.418 41.667 0.00 0.00 34.48 3.91
2324 8227 5.506982 GCTTATAGCCTCCTTTTCATTGCTG 60.507 44.000 0.00 0.00 34.48 4.41
2325 8228 2.592102 AGCCTCCTTTTCATTGCTGA 57.408 45.000 0.00 0.00 0.00 4.26
2326 8229 2.880443 AGCCTCCTTTTCATTGCTGAA 58.120 42.857 0.00 0.00 39.62 3.02
2327 8230 3.438183 AGCCTCCTTTTCATTGCTGAAT 58.562 40.909 0.00 0.00 40.95 2.57
2328 8231 3.836562 AGCCTCCTTTTCATTGCTGAATT 59.163 39.130 0.00 0.00 40.95 2.17
2329 8232 3.930848 GCCTCCTTTTCATTGCTGAATTG 59.069 43.478 0.00 0.00 40.95 2.32
2330 8233 3.930848 CCTCCTTTTCATTGCTGAATTGC 59.069 43.478 0.00 0.00 40.95 3.56
2331 8234 4.561938 CCTCCTTTTCATTGCTGAATTGCA 60.562 41.667 0.00 0.00 40.95 4.08
2344 8247 4.734398 TGAATTGCAGACTTTGTTTGGT 57.266 36.364 0.00 0.00 0.00 3.67
2345 8248 5.083533 TGAATTGCAGACTTTGTTTGGTT 57.916 34.783 0.00 0.00 0.00 3.67
2346 8249 5.486526 TGAATTGCAGACTTTGTTTGGTTT 58.513 33.333 0.00 0.00 0.00 3.27
2347 8250 5.350914 TGAATTGCAGACTTTGTTTGGTTTG 59.649 36.000 0.00 0.00 0.00 2.93
2348 8251 3.244033 TGCAGACTTTGTTTGGTTTGG 57.756 42.857 0.00 0.00 0.00 3.28
2349 8252 2.828520 TGCAGACTTTGTTTGGTTTGGA 59.171 40.909 0.00 0.00 0.00 3.53
2350 8253 3.186909 GCAGACTTTGTTTGGTTTGGAC 58.813 45.455 0.00 0.00 0.00 4.02
2351 8254 3.119137 GCAGACTTTGTTTGGTTTGGACT 60.119 43.478 0.00 0.00 0.00 3.85
2352 8255 4.620567 GCAGACTTTGTTTGGTTTGGACTT 60.621 41.667 0.00 0.00 0.00 3.01
2353 8256 5.478407 CAGACTTTGTTTGGTTTGGACTTT 58.522 37.500 0.00 0.00 0.00 2.66
2354 8257 6.626302 CAGACTTTGTTTGGTTTGGACTTTA 58.374 36.000 0.00 0.00 0.00 1.85
2355 8258 7.093992 CAGACTTTGTTTGGTTTGGACTTTAA 58.906 34.615 0.00 0.00 0.00 1.52
2356 8259 7.763985 CAGACTTTGTTTGGTTTGGACTTTAAT 59.236 33.333 0.00 0.00 0.00 1.40
2357 8260 8.973182 AGACTTTGTTTGGTTTGGACTTTAATA 58.027 29.630 0.00 0.00 0.00 0.98
2358 8261 9.589111 GACTTTGTTTGGTTTGGACTTTAATAA 57.411 29.630 0.00 0.00 0.00 1.40
2359 8262 9.594478 ACTTTGTTTGGTTTGGACTTTAATAAG 57.406 29.630 0.00 0.00 37.40 1.73
2360 8263 9.810545 CTTTGTTTGGTTTGGACTTTAATAAGA 57.189 29.630 0.00 0.00 35.30 2.10
2362 8265 9.757227 TTGTTTGGTTTGGACTTTAATAAGATG 57.243 29.630 0.00 0.00 35.30 2.90
2363 8266 8.364142 TGTTTGGTTTGGACTTTAATAAGATGG 58.636 33.333 0.00 0.00 35.30 3.51
2364 8267 8.364894 GTTTGGTTTGGACTTTAATAAGATGGT 58.635 33.333 0.00 0.00 35.30 3.55
2365 8268 7.696992 TGGTTTGGACTTTAATAAGATGGTC 57.303 36.000 0.00 0.00 35.30 4.02
2366 8269 6.373216 TGGTTTGGACTTTAATAAGATGGTCG 59.627 38.462 0.00 0.00 35.30 4.79
2367 8270 6.255950 GTTTGGACTTTAATAAGATGGTCGC 58.744 40.000 0.00 0.00 35.30 5.19
2368 8271 5.092554 TGGACTTTAATAAGATGGTCGCA 57.907 39.130 0.00 0.00 35.30 5.10
2369 8272 5.680619 TGGACTTTAATAAGATGGTCGCAT 58.319 37.500 0.00 0.00 35.30 4.73
2370 8273 5.527214 TGGACTTTAATAAGATGGTCGCATG 59.473 40.000 0.00 0.00 35.30 4.06
2371 8274 5.424121 ACTTTAATAAGATGGTCGCATGC 57.576 39.130 7.91 7.91 35.30 4.06
2372 8275 4.881273 ACTTTAATAAGATGGTCGCATGCA 59.119 37.500 19.57 1.73 35.30 3.96
2373 8276 5.532406 ACTTTAATAAGATGGTCGCATGCAT 59.468 36.000 19.57 2.77 35.30 3.96
2374 8277 5.611796 TTAATAAGATGGTCGCATGCATC 57.388 39.130 19.57 12.80 0.00 3.91
2375 8278 1.501169 TAAGATGGTCGCATGCATCG 58.499 50.000 19.57 4.09 0.00 3.84
2376 8279 0.462581 AAGATGGTCGCATGCATCGT 60.463 50.000 19.57 8.36 0.00 3.73
2377 8280 0.462581 AGATGGTCGCATGCATCGTT 60.463 50.000 19.57 0.00 0.00 3.85
2378 8281 0.041839 GATGGTCGCATGCATCGTTC 60.042 55.000 19.57 4.87 0.00 3.95
2379 8282 1.439353 ATGGTCGCATGCATCGTTCC 61.439 55.000 19.57 16.69 0.00 3.62
2380 8283 2.321060 GTCGCATGCATCGTTCCG 59.679 61.111 19.57 0.00 0.00 4.30
2381 8284 2.164663 GTCGCATGCATCGTTCCGA 61.165 57.895 19.57 0.55 41.13 4.55
2390 8293 1.227380 ATCGTTCCGATGCAGAGGC 60.227 57.895 5.43 0.00 45.24 4.70
2391 8294 2.650813 ATCGTTCCGATGCAGAGGCC 62.651 60.000 0.00 0.00 45.24 5.19
2392 8295 2.892425 GTTCCGATGCAGAGGCCG 60.892 66.667 0.00 0.00 40.13 6.13
2393 8296 4.161295 TTCCGATGCAGAGGCCGG 62.161 66.667 0.00 0.00 43.53 6.13
2395 8298 4.598894 CCGATGCAGAGGCCGGAG 62.599 72.222 5.05 0.00 44.51 4.63
2463 8477 6.435430 TTTCATTCAATGTGGTTATCTCCG 57.565 37.500 0.00 0.00 0.00 4.63
2574 8590 5.357032 CCCTTGGTGATTGTGTTAGATTACC 59.643 44.000 0.00 0.00 33.75 2.85
2736 8969 9.667107 TTAATTTATTTCCTCTCTACACCACTG 57.333 33.333 0.00 0.00 0.00 3.66
2839 9073 7.854557 TCTCATCCAGTTTAATCTTGACATG 57.145 36.000 0.00 0.00 0.00 3.21
2971 9221 3.517296 TGGTAGTGGAGCCAATCAAAA 57.483 42.857 0.00 0.00 0.00 2.44
3037 9289 9.964354 AGTACTGGTGTATATATATCGTTGGTA 57.036 33.333 0.00 0.00 0.00 3.25
3038 9290 9.994432 GTACTGGTGTATATATATCGTTGGTAC 57.006 37.037 0.00 4.40 0.00 3.34
3039 9291 8.640063 ACTGGTGTATATATATCGTTGGTACA 57.360 34.615 0.00 0.00 0.00 2.90
3040 9292 8.517878 ACTGGTGTATATATATCGTTGGTACAC 58.482 37.037 11.68 11.68 39.29 2.90
3043 9295 8.059798 GTGTATATATATCGTTGGTACACCCT 57.940 38.462 0.00 0.00 39.29 4.34
3044 9296 8.526147 GTGTATATATATCGTTGGTACACCCTT 58.474 37.037 0.00 0.00 39.29 3.95
3045 9297 8.742777 TGTATATATATCGTTGGTACACCCTTC 58.257 37.037 0.00 0.00 39.29 3.46
3046 9298 7.786046 ATATATATCGTTGGTACACCCTTCA 57.214 36.000 0.00 0.00 39.29 3.02
3047 9299 6.681729 ATATATCGTTGGTACACCCTTCAT 57.318 37.500 0.00 0.00 39.29 2.57
3048 9300 2.754946 TCGTTGGTACACCCTTCATC 57.245 50.000 0.00 0.00 39.29 2.92
3049 9301 2.253610 TCGTTGGTACACCCTTCATCT 58.746 47.619 0.00 0.00 39.29 2.90
3050 9302 3.433343 TCGTTGGTACACCCTTCATCTA 58.567 45.455 0.00 0.00 39.29 1.98
3051 9303 3.446161 TCGTTGGTACACCCTTCATCTAG 59.554 47.826 0.00 0.00 39.29 2.43
3052 9304 3.430374 CGTTGGTACACCCTTCATCTAGG 60.430 52.174 0.00 0.00 39.29 3.02
3053 9305 3.484953 TGGTACACCCTTCATCTAGGT 57.515 47.619 0.00 0.00 33.17 3.08
3057 9309 2.029838 CACCCTTCATCTAGGTGTGC 57.970 55.000 2.20 0.00 44.95 4.57
3058 9310 1.278985 CACCCTTCATCTAGGTGTGCA 59.721 52.381 2.20 0.00 44.95 4.57
3059 9311 1.985159 ACCCTTCATCTAGGTGTGCAA 59.015 47.619 2.20 0.00 33.17 4.08
3060 9312 2.026822 ACCCTTCATCTAGGTGTGCAAG 60.027 50.000 2.20 0.00 33.17 4.01
3061 9313 2.026822 CCCTTCATCTAGGTGTGCAAGT 60.027 50.000 2.20 0.00 33.17 3.16
3062 9314 3.265791 CCTTCATCTAGGTGTGCAAGTC 58.734 50.000 2.20 0.00 0.00 3.01
3063 9315 3.306989 CCTTCATCTAGGTGTGCAAGTCA 60.307 47.826 2.20 0.00 0.00 3.41
3064 9316 3.319137 TCATCTAGGTGTGCAAGTCAC 57.681 47.619 2.20 0.00 45.82 3.67
3071 9323 1.860676 GTGTGCAAGTCACCTTACGA 58.139 50.000 0.00 0.00 45.03 3.43
3072 9324 2.206750 GTGTGCAAGTCACCTTACGAA 58.793 47.619 0.00 0.00 45.03 3.85
3073 9325 2.610374 GTGTGCAAGTCACCTTACGAAA 59.390 45.455 0.00 0.00 45.03 3.46
3074 9326 3.064271 GTGTGCAAGTCACCTTACGAAAA 59.936 43.478 0.00 0.00 45.03 2.29
3075 9327 3.064271 TGTGCAAGTCACCTTACGAAAAC 59.936 43.478 0.00 0.00 45.03 2.43
3076 9328 2.614983 TGCAAGTCACCTTACGAAAACC 59.385 45.455 0.00 0.00 0.00 3.27
3077 9329 2.614983 GCAAGTCACCTTACGAAAACCA 59.385 45.455 0.00 0.00 0.00 3.67
3078 9330 3.065648 GCAAGTCACCTTACGAAAACCAA 59.934 43.478 0.00 0.00 0.00 3.67
3079 9331 4.439016 GCAAGTCACCTTACGAAAACCAAA 60.439 41.667 0.00 0.00 0.00 3.28
3080 9332 5.735070 GCAAGTCACCTTACGAAAACCAAAT 60.735 40.000 0.00 0.00 0.00 2.32
3081 9333 6.513720 GCAAGTCACCTTACGAAAACCAAATA 60.514 38.462 0.00 0.00 0.00 1.40
3082 9334 7.419204 CAAGTCACCTTACGAAAACCAAATAA 58.581 34.615 0.00 0.00 0.00 1.40
3083 9335 7.754851 AGTCACCTTACGAAAACCAAATAAT 57.245 32.000 0.00 0.00 0.00 1.28
3084 9336 8.173542 AGTCACCTTACGAAAACCAAATAATT 57.826 30.769 0.00 0.00 0.00 1.40
3085 9337 8.635328 AGTCACCTTACGAAAACCAAATAATTT 58.365 29.630 0.00 0.00 0.00 1.82
3086 9338 8.908678 GTCACCTTACGAAAACCAAATAATTTC 58.091 33.333 0.00 0.00 0.00 2.17
3087 9339 8.630917 TCACCTTACGAAAACCAAATAATTTCA 58.369 29.630 0.00 0.00 33.68 2.69
3088 9340 9.250624 CACCTTACGAAAACCAAATAATTTCAA 57.749 29.630 0.00 0.00 33.68 2.69
3089 9341 9.819267 ACCTTACGAAAACCAAATAATTTCAAA 57.181 25.926 0.00 0.00 33.68 2.69
3094 9346 9.157104 ACGAAAACCAAATAATTTCAAAACACT 57.843 25.926 0.00 0.00 33.68 3.55
3095 9347 9.980780 CGAAAACCAAATAATTTCAAAACACTT 57.019 25.926 0.00 0.00 33.68 3.16
3099 9351 8.601845 ACCAAATAATTTCAAAACACTTAGGC 57.398 30.769 0.00 0.00 0.00 3.93
3100 9352 8.207545 ACCAAATAATTTCAAAACACTTAGGCA 58.792 29.630 0.00 0.00 0.00 4.75
3101 9353 8.495148 CCAAATAATTTCAAAACACTTAGGCAC 58.505 33.333 0.00 0.00 0.00 5.01
3102 9354 7.867445 AATAATTTCAAAACACTTAGGCACG 57.133 32.000 0.00 0.00 0.00 5.34
3103 9355 3.701532 TTTCAAAACACTTAGGCACGG 57.298 42.857 0.00 0.00 0.00 4.94
3104 9356 2.335316 TCAAAACACTTAGGCACGGT 57.665 45.000 0.00 0.00 0.00 4.83
3105 9357 3.472283 TCAAAACACTTAGGCACGGTA 57.528 42.857 0.00 0.00 0.00 4.02
3106 9358 3.132925 TCAAAACACTTAGGCACGGTAC 58.867 45.455 0.00 0.00 0.00 3.34
3107 9359 2.873472 CAAAACACTTAGGCACGGTACA 59.127 45.455 0.00 0.00 0.00 2.90
3108 9360 3.412237 AAACACTTAGGCACGGTACAT 57.588 42.857 0.00 0.00 0.00 2.29
3109 9361 3.412237 AACACTTAGGCACGGTACATT 57.588 42.857 0.00 0.00 0.00 2.71
3110 9362 4.540359 AACACTTAGGCACGGTACATTA 57.460 40.909 0.00 0.00 0.00 1.90
3111 9363 4.540359 ACACTTAGGCACGGTACATTAA 57.460 40.909 0.00 0.00 0.00 1.40
3112 9364 4.248058 ACACTTAGGCACGGTACATTAAC 58.752 43.478 0.00 0.00 0.00 2.01
3113 9365 4.020839 ACACTTAGGCACGGTACATTAACT 60.021 41.667 0.00 0.00 0.00 2.24
3114 9366 4.933400 CACTTAGGCACGGTACATTAACTT 59.067 41.667 0.00 0.00 0.00 2.66
3115 9367 5.063060 CACTTAGGCACGGTACATTAACTTC 59.937 44.000 0.00 0.00 0.00 3.01
3116 9368 2.981898 AGGCACGGTACATTAACTTCC 58.018 47.619 0.00 0.00 0.00 3.46
3117 9369 2.570302 AGGCACGGTACATTAACTTCCT 59.430 45.455 0.00 0.00 0.00 3.36
3118 9370 3.008704 AGGCACGGTACATTAACTTCCTT 59.991 43.478 0.00 0.00 0.00 3.36
3119 9371 3.373130 GGCACGGTACATTAACTTCCTTC 59.627 47.826 0.00 0.00 0.00 3.46
3120 9372 4.251268 GCACGGTACATTAACTTCCTTCT 58.749 43.478 0.00 0.00 0.00 2.85
3121 9373 4.329256 GCACGGTACATTAACTTCCTTCTC 59.671 45.833 0.00 0.00 0.00 2.87
3122 9374 4.561606 CACGGTACATTAACTTCCTTCTCG 59.438 45.833 0.00 0.00 0.00 4.04
3123 9375 4.219288 ACGGTACATTAACTTCCTTCTCGT 59.781 41.667 0.00 0.00 0.00 4.18
3124 9376 5.166398 CGGTACATTAACTTCCTTCTCGTT 58.834 41.667 0.00 0.00 0.00 3.85
3125 9377 5.636543 CGGTACATTAACTTCCTTCTCGTTT 59.363 40.000 0.00 0.00 0.00 3.60
3126 9378 6.146673 CGGTACATTAACTTCCTTCTCGTTTT 59.853 38.462 0.00 0.00 0.00 2.43
3127 9379 7.307573 CGGTACATTAACTTCCTTCTCGTTTTT 60.308 37.037 0.00 0.00 0.00 1.94
3152 9404 9.949174 TTTATTTCATGACATATCAACGAATGG 57.051 29.630 2.47 0.00 38.69 3.16
3153 9405 6.375945 TTTCATGACATATCAACGAATGGG 57.624 37.500 0.00 0.00 38.69 4.00
3154 9406 5.289083 TCATGACATATCAACGAATGGGA 57.711 39.130 0.00 0.00 38.69 4.37
3155 9407 5.299949 TCATGACATATCAACGAATGGGAG 58.700 41.667 0.00 0.00 38.69 4.30
3156 9408 5.070313 TCATGACATATCAACGAATGGGAGA 59.930 40.000 0.00 0.00 38.69 3.71
3157 9409 5.551305 TGACATATCAACGAATGGGAGAT 57.449 39.130 0.00 0.00 0.00 2.75
3158 9410 5.299949 TGACATATCAACGAATGGGAGATG 58.700 41.667 0.00 0.00 36.58 2.90
3159 9411 5.163311 TGACATATCAACGAATGGGAGATGT 60.163 40.000 0.00 0.00 43.74 3.06
3160 9412 5.059161 ACATATCAACGAATGGGAGATGTG 58.941 41.667 0.00 0.00 40.70 3.21
3161 9413 2.401583 TCAACGAATGGGAGATGTGG 57.598 50.000 0.00 0.00 0.00 4.17
3162 9414 1.065491 TCAACGAATGGGAGATGTGGG 60.065 52.381 0.00 0.00 0.00 4.61
3163 9415 0.394352 AACGAATGGGAGATGTGGGC 60.394 55.000 0.00 0.00 0.00 5.36
3164 9416 1.526917 CGAATGGGAGATGTGGGCC 60.527 63.158 0.00 0.00 0.00 5.80
3165 9417 1.526917 GAATGGGAGATGTGGGCCG 60.527 63.158 0.00 0.00 0.00 6.13
3166 9418 2.270874 GAATGGGAGATGTGGGCCGT 62.271 60.000 0.00 0.00 0.00 5.68
3167 9419 2.556840 AATGGGAGATGTGGGCCGTG 62.557 60.000 0.00 0.00 0.00 4.94
3169 9421 4.101448 GGAGATGTGGGCCGTGCT 62.101 66.667 0.00 0.00 0.00 4.40
3170 9422 2.045926 GAGATGTGGGCCGTGCTT 60.046 61.111 0.00 0.00 0.00 3.91
3171 9423 2.360350 AGATGTGGGCCGTGCTTG 60.360 61.111 0.00 0.00 0.00 4.01
3172 9424 4.120331 GATGTGGGCCGTGCTTGC 62.120 66.667 0.00 0.00 0.00 4.01
3173 9425 4.666253 ATGTGGGCCGTGCTTGCT 62.666 61.111 0.00 0.00 0.00 3.91
3174 9426 4.892965 TGTGGGCCGTGCTTGCTT 62.893 61.111 0.00 0.00 0.00 3.91
3175 9427 3.605664 GTGGGCCGTGCTTGCTTT 61.606 61.111 0.00 0.00 0.00 3.51
3176 9428 3.294493 TGGGCCGTGCTTGCTTTC 61.294 61.111 0.00 0.00 0.00 2.62
3177 9429 3.294493 GGGCCGTGCTTGCTTTCA 61.294 61.111 0.00 0.00 0.00 2.69
3178 9430 2.727544 GGCCGTGCTTGCTTTCAA 59.272 55.556 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.191544 CCAAATGGATCAGCGAAGTAGAA 58.808 43.478 0.00 0.00 37.39 2.10
1 2 3.197766 ACCAAATGGATCAGCGAAGTAGA 59.802 43.478 6.42 0.00 38.94 2.59
2 3 3.310774 CACCAAATGGATCAGCGAAGTAG 59.689 47.826 6.42 0.00 38.94 2.57
4 5 2.086869 CACCAAATGGATCAGCGAAGT 58.913 47.619 6.42 0.00 38.94 3.01
5 6 2.086869 ACACCAAATGGATCAGCGAAG 58.913 47.619 6.42 0.00 38.94 3.79
6 7 2.198827 ACACCAAATGGATCAGCGAA 57.801 45.000 6.42 0.00 38.94 4.70
7 8 2.198827 AACACCAAATGGATCAGCGA 57.801 45.000 6.42 0.00 38.94 4.93
8 9 2.728846 CGAAACACCAAATGGATCAGCG 60.729 50.000 6.42 0.91 38.94 5.18
9 10 2.228822 ACGAAACACCAAATGGATCAGC 59.771 45.455 6.42 0.00 38.94 4.26
10 11 4.503741 AACGAAACACCAAATGGATCAG 57.496 40.909 6.42 0.00 38.94 2.90
11 12 4.927978 AAACGAAACACCAAATGGATCA 57.072 36.364 6.42 0.00 38.94 2.92
35 36 3.325293 TGCACACAGCCAAAAGAAAAA 57.675 38.095 0.00 0.00 44.83 1.94
36 37 3.456280 GATGCACACAGCCAAAAGAAAA 58.544 40.909 0.00 0.00 44.83 2.29
37 38 3.096489 GATGCACACAGCCAAAAGAAA 57.904 42.857 0.00 0.00 44.83 2.52
38 39 2.798976 GATGCACACAGCCAAAAGAA 57.201 45.000 0.00 0.00 44.83 2.52
46 47 1.131883 GACATCAAGGATGCACACAGC 59.868 52.381 6.15 0.00 43.15 4.40
47 48 2.676839 GAGACATCAAGGATGCACACAG 59.323 50.000 6.15 0.00 43.15 3.66
48 49 2.703416 GAGACATCAAGGATGCACACA 58.297 47.619 6.15 0.00 43.15 3.72
49 50 1.662629 CGAGACATCAAGGATGCACAC 59.337 52.381 6.15 0.00 43.15 3.82
50 51 1.550072 TCGAGACATCAAGGATGCACA 59.450 47.619 6.15 0.00 43.15 4.57
51 52 1.929836 GTCGAGACATCAAGGATGCAC 59.070 52.381 6.15 1.88 43.15 4.57
52 53 1.827344 AGTCGAGACATCAAGGATGCA 59.173 47.619 5.99 0.00 43.15 3.96
53 54 2.593346 AGTCGAGACATCAAGGATGC 57.407 50.000 5.99 0.38 43.15 3.91
54 55 3.067320 TGCTAGTCGAGACATCAAGGATG 59.933 47.826 5.99 4.74 44.71 3.51
55 56 3.067461 GTGCTAGTCGAGACATCAAGGAT 59.933 47.826 5.99 0.00 0.00 3.24
56 57 2.423892 GTGCTAGTCGAGACATCAAGGA 59.576 50.000 5.99 0.00 0.00 3.36
57 58 2.425312 AGTGCTAGTCGAGACATCAAGG 59.575 50.000 5.99 0.00 0.00 3.61
58 59 3.773860 AGTGCTAGTCGAGACATCAAG 57.226 47.619 5.99 0.00 0.00 3.02
59 60 5.836821 ATTAGTGCTAGTCGAGACATCAA 57.163 39.130 5.99 0.00 0.00 2.57
60 61 5.357032 TCAATTAGTGCTAGTCGAGACATCA 59.643 40.000 5.99 0.00 0.00 3.07
61 62 5.683743 GTCAATTAGTGCTAGTCGAGACATC 59.316 44.000 5.99 0.00 0.00 3.06
62 63 5.125578 TGTCAATTAGTGCTAGTCGAGACAT 59.874 40.000 5.99 0.00 0.00 3.06
63 64 4.457949 TGTCAATTAGTGCTAGTCGAGACA 59.542 41.667 5.99 0.00 0.00 3.41
64 65 4.982999 TGTCAATTAGTGCTAGTCGAGAC 58.017 43.478 0.00 0.00 0.00 3.36
65 66 5.836821 ATGTCAATTAGTGCTAGTCGAGA 57.163 39.130 0.00 0.00 0.00 4.04
66 67 9.847706 ATATAATGTCAATTAGTGCTAGTCGAG 57.152 33.333 0.00 0.00 31.81 4.04
73 74 8.685427 TGCAACAATATAATGTCAATTAGTGCT 58.315 29.630 11.01 0.00 31.81 4.40
74 75 8.854979 TGCAACAATATAATGTCAATTAGTGC 57.145 30.769 5.08 5.08 31.81 4.40
77 78 9.888878 CCTCTGCAACAATATAATGTCAATTAG 57.111 33.333 0.00 0.00 31.81 1.73
78 79 8.352201 GCCTCTGCAACAATATAATGTCAATTA 58.648 33.333 0.00 0.00 37.47 1.40
79 80 7.205297 GCCTCTGCAACAATATAATGTCAATT 58.795 34.615 0.00 0.00 37.47 2.32
80 81 6.239120 GGCCTCTGCAACAATATAATGTCAAT 60.239 38.462 0.00 0.00 40.13 2.57
81 82 5.067674 GGCCTCTGCAACAATATAATGTCAA 59.932 40.000 0.00 0.00 40.13 3.18
82 83 4.580167 GGCCTCTGCAACAATATAATGTCA 59.420 41.667 0.00 0.00 40.13 3.58
83 84 4.319766 CGGCCTCTGCAACAATATAATGTC 60.320 45.833 0.00 0.00 40.13 3.06
84 85 3.565482 CGGCCTCTGCAACAATATAATGT 59.435 43.478 0.00 0.00 40.13 2.71
85 86 3.058016 CCGGCCTCTGCAACAATATAATG 60.058 47.826 0.00 0.00 40.13 1.90
86 87 3.149196 CCGGCCTCTGCAACAATATAAT 58.851 45.455 0.00 0.00 40.13 1.28
87 88 2.571212 CCGGCCTCTGCAACAATATAA 58.429 47.619 0.00 0.00 40.13 0.98
88 89 1.202758 CCCGGCCTCTGCAACAATATA 60.203 52.381 0.00 0.00 40.13 0.86
89 90 0.466189 CCCGGCCTCTGCAACAATAT 60.466 55.000 0.00 0.00 40.13 1.28
90 91 1.077787 CCCGGCCTCTGCAACAATA 60.078 57.895 0.00 0.00 40.13 1.90
91 92 2.361610 CCCGGCCTCTGCAACAAT 60.362 61.111 0.00 0.00 40.13 2.71
92 93 3.884774 ACCCGGCCTCTGCAACAA 61.885 61.111 0.00 0.00 40.13 2.83
93 94 4.641645 CACCCGGCCTCTGCAACA 62.642 66.667 0.00 0.00 40.13 3.33
94 95 2.741486 TTACACCCGGCCTCTGCAAC 62.741 60.000 0.00 0.00 40.13 4.17
95 96 2.058125 TTTACACCCGGCCTCTGCAA 62.058 55.000 0.00 0.00 40.13 4.08
96 97 1.847798 ATTTACACCCGGCCTCTGCA 61.848 55.000 0.00 0.00 40.13 4.41
97 98 1.077716 ATTTACACCCGGCCTCTGC 60.078 57.895 0.00 0.00 0.00 4.26
98 99 0.251916 TCATTTACACCCGGCCTCTG 59.748 55.000 0.00 0.00 0.00 3.35
99 100 1.213296 ATCATTTACACCCGGCCTCT 58.787 50.000 0.00 0.00 0.00 3.69
100 101 2.922740 TATCATTTACACCCGGCCTC 57.077 50.000 0.00 0.00 0.00 4.70
101 102 2.039879 GGATATCATTTACACCCGGCCT 59.960 50.000 0.00 0.00 0.00 5.19
102 103 2.433436 GGATATCATTTACACCCGGCC 58.567 52.381 4.83 0.00 0.00 6.13
103 104 2.073816 CGGATATCATTTACACCCGGC 58.926 52.381 4.83 0.00 32.64 6.13
104 105 3.671008 TCGGATATCATTTACACCCGG 57.329 47.619 4.83 0.00 36.47 5.73
105 106 5.234752 TCAATCGGATATCATTTACACCCG 58.765 41.667 4.83 0.00 37.08 5.28
106 107 8.041323 AGTATCAATCGGATATCATTTACACCC 58.959 37.037 4.83 0.00 40.49 4.61
137 138 9.929180 CTACTCATTTTCTCGATAATGGGAATA 57.071 33.333 17.02 0.29 34.96 1.75
138 139 8.651389 TCTACTCATTTTCTCGATAATGGGAAT 58.349 33.333 17.02 3.85 34.96 3.01
139 140 8.018537 TCTACTCATTTTCTCGATAATGGGAA 57.981 34.615 17.02 1.10 34.96 3.97
140 141 7.597288 TCTACTCATTTTCTCGATAATGGGA 57.403 36.000 17.02 8.27 34.96 4.37
141 142 6.367422 GCTCTACTCATTTTCTCGATAATGGG 59.633 42.308 11.32 11.32 36.64 4.00
142 143 6.088749 CGCTCTACTCATTTTCTCGATAATGG 59.911 42.308 12.36 7.84 32.82 3.16
143 144 6.088749 CCGCTCTACTCATTTTCTCGATAATG 59.911 42.308 8.11 8.11 33.10 1.90
144 145 6.016192 TCCGCTCTACTCATTTTCTCGATAAT 60.016 38.462 0.00 0.00 0.00 1.28
145 146 5.298527 TCCGCTCTACTCATTTTCTCGATAA 59.701 40.000 0.00 0.00 0.00 1.75
146 147 4.820173 TCCGCTCTACTCATTTTCTCGATA 59.180 41.667 0.00 0.00 0.00 2.92
147 148 3.632604 TCCGCTCTACTCATTTTCTCGAT 59.367 43.478 0.00 0.00 0.00 3.59
148 149 3.014623 TCCGCTCTACTCATTTTCTCGA 58.985 45.455 0.00 0.00 0.00 4.04
149 150 3.181495 ACTCCGCTCTACTCATTTTCTCG 60.181 47.826 0.00 0.00 0.00 4.04
150 151 4.379339 ACTCCGCTCTACTCATTTTCTC 57.621 45.455 0.00 0.00 0.00 2.87
151 152 4.810191 AACTCCGCTCTACTCATTTTCT 57.190 40.909 0.00 0.00 0.00 2.52
152 153 4.436183 GCAAACTCCGCTCTACTCATTTTC 60.436 45.833 0.00 0.00 0.00 2.29
153 154 3.437049 GCAAACTCCGCTCTACTCATTTT 59.563 43.478 0.00 0.00 0.00 1.82
154 155 3.003480 GCAAACTCCGCTCTACTCATTT 58.997 45.455 0.00 0.00 0.00 2.32
155 156 2.234908 AGCAAACTCCGCTCTACTCATT 59.765 45.455 0.00 0.00 33.35 2.57
156 157 1.827969 AGCAAACTCCGCTCTACTCAT 59.172 47.619 0.00 0.00 33.35 2.90
157 158 1.067565 CAGCAAACTCCGCTCTACTCA 60.068 52.381 0.00 0.00 37.72 3.41
158 159 1.067495 ACAGCAAACTCCGCTCTACTC 60.067 52.381 0.00 0.00 37.72 2.59
159 160 0.969894 ACAGCAAACTCCGCTCTACT 59.030 50.000 0.00 0.00 37.72 2.57
160 161 1.797025 AACAGCAAACTCCGCTCTAC 58.203 50.000 0.00 0.00 37.72 2.59
161 162 3.521560 CATAACAGCAAACTCCGCTCTA 58.478 45.455 0.00 0.00 37.72 2.43
162 163 2.350522 CATAACAGCAAACTCCGCTCT 58.649 47.619 0.00 0.00 37.72 4.09
163 164 1.398390 CCATAACAGCAAACTCCGCTC 59.602 52.381 0.00 0.00 37.72 5.03
164 165 1.271379 ACCATAACAGCAAACTCCGCT 60.271 47.619 0.00 0.00 41.47 5.52
165 166 1.165270 ACCATAACAGCAAACTCCGC 58.835 50.000 0.00 0.00 0.00 5.54
166 167 3.938963 ACATACCATAACAGCAAACTCCG 59.061 43.478 0.00 0.00 0.00 4.63
167 168 4.700213 ACACATACCATAACAGCAAACTCC 59.300 41.667 0.00 0.00 0.00 3.85
168 169 5.880054 ACACATACCATAACAGCAAACTC 57.120 39.130 0.00 0.00 0.00 3.01
169 170 6.648879 AAACACATACCATAACAGCAAACT 57.351 33.333 0.00 0.00 0.00 2.66
170 171 7.027161 CCTAAACACATACCATAACAGCAAAC 58.973 38.462 0.00 0.00 0.00 2.93
171 172 6.349777 GCCTAAACACATACCATAACAGCAAA 60.350 38.462 0.00 0.00 0.00 3.68
172 173 5.124776 GCCTAAACACATACCATAACAGCAA 59.875 40.000 0.00 0.00 0.00 3.91
173 174 4.638421 GCCTAAACACATACCATAACAGCA 59.362 41.667 0.00 0.00 0.00 4.41
174 175 4.638421 TGCCTAAACACATACCATAACAGC 59.362 41.667 0.00 0.00 0.00 4.40
175 176 6.542005 TCATGCCTAAACACATACCATAACAG 59.458 38.462 0.00 0.00 0.00 3.16
176 177 6.418946 TCATGCCTAAACACATACCATAACA 58.581 36.000 0.00 0.00 0.00 2.41
177 178 6.935741 TCATGCCTAAACACATACCATAAC 57.064 37.500 0.00 0.00 0.00 1.89
178 179 9.634021 TTAATCATGCCTAAACACATACCATAA 57.366 29.630 0.00 0.00 0.00 1.90
179 180 9.283768 CTTAATCATGCCTAAACACATACCATA 57.716 33.333 0.00 0.00 0.00 2.74
180 181 7.998383 TCTTAATCATGCCTAAACACATACCAT 59.002 33.333 0.00 0.00 0.00 3.55
181 182 7.342581 TCTTAATCATGCCTAAACACATACCA 58.657 34.615 0.00 0.00 0.00 3.25
182 183 7.801716 TCTTAATCATGCCTAAACACATACC 57.198 36.000 0.00 0.00 0.00 2.73
183 184 9.884465 GAATCTTAATCATGCCTAAACACATAC 57.116 33.333 0.00 0.00 0.00 2.39
184 185 9.625747 TGAATCTTAATCATGCCTAAACACATA 57.374 29.630 0.00 0.00 0.00 2.29
185 186 8.523915 TGAATCTTAATCATGCCTAAACACAT 57.476 30.769 0.00 0.00 0.00 3.21
186 187 7.611467 ACTGAATCTTAATCATGCCTAAACACA 59.389 33.333 0.00 0.00 0.00 3.72
187 188 7.989826 ACTGAATCTTAATCATGCCTAAACAC 58.010 34.615 0.00 0.00 0.00 3.32
188 189 8.461222 CAACTGAATCTTAATCATGCCTAAACA 58.539 33.333 0.00 0.00 0.00 2.83
189 190 8.462016 ACAACTGAATCTTAATCATGCCTAAAC 58.538 33.333 0.00 0.00 0.00 2.01
190 191 8.579850 ACAACTGAATCTTAATCATGCCTAAA 57.420 30.769 0.00 0.00 0.00 1.85
191 192 9.330063 CTACAACTGAATCTTAATCATGCCTAA 57.670 33.333 0.00 0.00 0.00 2.69
192 193 7.442364 GCTACAACTGAATCTTAATCATGCCTA 59.558 37.037 0.00 0.00 0.00 3.93
193 194 6.261826 GCTACAACTGAATCTTAATCATGCCT 59.738 38.462 0.00 0.00 0.00 4.75
194 195 6.038603 TGCTACAACTGAATCTTAATCATGCC 59.961 38.462 0.00 0.00 0.00 4.40
195 196 7.011763 TCTGCTACAACTGAATCTTAATCATGC 59.988 37.037 0.00 0.00 0.00 4.06
196 197 8.429493 TCTGCTACAACTGAATCTTAATCATG 57.571 34.615 0.00 0.00 0.00 3.07
197 198 9.053840 CATCTGCTACAACTGAATCTTAATCAT 57.946 33.333 0.00 0.00 0.00 2.45
198 199 7.496920 CCATCTGCTACAACTGAATCTTAATCA 59.503 37.037 0.00 0.00 0.00 2.57
199 200 7.497249 ACCATCTGCTACAACTGAATCTTAATC 59.503 37.037 0.00 0.00 0.00 1.75
200 201 7.341805 ACCATCTGCTACAACTGAATCTTAAT 58.658 34.615 0.00 0.00 0.00 1.40
201 202 6.711277 ACCATCTGCTACAACTGAATCTTAA 58.289 36.000 0.00 0.00 0.00 1.85
202 203 6.155221 AGACCATCTGCTACAACTGAATCTTA 59.845 38.462 0.00 0.00 0.00 2.10
203 204 5.046014 AGACCATCTGCTACAACTGAATCTT 60.046 40.000 0.00 0.00 0.00 2.40
204 205 4.469227 AGACCATCTGCTACAACTGAATCT 59.531 41.667 0.00 0.00 0.00 2.40
205 206 4.569966 CAGACCATCTGCTACAACTGAATC 59.430 45.833 0.00 0.00 37.72 2.52
206 207 4.511527 CAGACCATCTGCTACAACTGAAT 58.488 43.478 0.00 0.00 37.72 2.57
207 208 3.930336 CAGACCATCTGCTACAACTGAA 58.070 45.455 0.00 0.00 37.72 3.02
208 209 3.599730 CAGACCATCTGCTACAACTGA 57.400 47.619 0.00 0.00 37.72 3.41
217 218 7.524532 TCTTCTATAAGCATACAGACCATCTGC 60.525 40.741 5.74 0.00 39.08 4.26
218 219 7.890515 TCTTCTATAAGCATACAGACCATCTG 58.109 38.462 4.27 4.27 40.21 2.90
219 220 7.309744 GCTCTTCTATAAGCATACAGACCATCT 60.310 40.741 0.00 0.00 38.42 2.90
220 221 6.811170 GCTCTTCTATAAGCATACAGACCATC 59.189 42.308 0.00 0.00 38.42 3.51
221 222 6.571344 CGCTCTTCTATAAGCATACAGACCAT 60.571 42.308 0.00 0.00 38.45 3.55
222 223 5.278512 CGCTCTTCTATAAGCATACAGACCA 60.279 44.000 0.00 0.00 38.45 4.02
223 224 5.157781 CGCTCTTCTATAAGCATACAGACC 58.842 45.833 0.00 0.00 38.45 3.85
224 225 5.048643 TCCGCTCTTCTATAAGCATACAGAC 60.049 44.000 0.00 0.00 38.45 3.51
225 226 5.070685 TCCGCTCTTCTATAAGCATACAGA 58.929 41.667 0.00 0.00 38.45 3.41
226 227 5.048364 ACTCCGCTCTTCTATAAGCATACAG 60.048 44.000 0.00 0.00 38.45 2.74
237 238 2.026169 TCTCTCCAACTCCGCTCTTCTA 60.026 50.000 0.00 0.00 0.00 2.10
246 247 2.093764 CCACTGTCATCTCTCCAACTCC 60.094 54.545 0.00 0.00 0.00 3.85
288 289 9.978044 TCAGTTAGTTGATCATATGAATCTCAG 57.022 33.333 9.99 0.00 0.00 3.35
296 297 7.933396 TGCCAAATCAGTTAGTTGATCATATG 58.067 34.615 0.00 0.00 36.81 1.78
298 299 8.523915 AATGCCAAATCAGTTAGTTGATCATA 57.476 30.769 0.00 0.00 36.81 2.15
309 310 2.299867 GTGGGTGAATGCCAAATCAGTT 59.700 45.455 0.00 0.00 0.00 3.16
337 338 3.524095 TCCTTCCTTTCTTGCATCCAA 57.476 42.857 0.00 0.00 0.00 3.53
338 339 3.524095 TTCCTTCCTTTCTTGCATCCA 57.476 42.857 0.00 0.00 0.00 3.41
347 348 3.518590 CTGCATGCATTTCCTTCCTTTC 58.481 45.455 22.97 0.00 0.00 2.62
348 349 2.235402 CCTGCATGCATTTCCTTCCTTT 59.765 45.455 22.97 0.00 0.00 3.11
351 352 0.462789 CCCTGCATGCATTTCCTTCC 59.537 55.000 22.97 0.00 0.00 3.46
359 360 2.311070 TGTCCTCCCCTGCATGCAT 61.311 57.895 22.97 0.00 0.00 3.96
369 370 1.610673 TCAGCCTCTGTGTCCTCCC 60.611 63.158 0.00 0.00 32.61 4.30
375 376 0.894141 CTGTAGCTCAGCCTCTGTGT 59.106 55.000 0.00 0.00 37.36 3.72
376 377 0.175302 CCTGTAGCTCAGCCTCTGTG 59.825 60.000 0.00 0.00 42.38 3.66
400 401 8.834749 ACTAATCTGAAAGTCTAAACCAACTC 57.165 34.615 0.00 0.00 33.76 3.01
409 410 9.475620 TGGATCACTTACTAATCTGAAAGTCTA 57.524 33.333 0.00 0.00 33.76 2.59
413 414 8.660373 GTGTTGGATCACTTACTAATCTGAAAG 58.340 37.037 0.00 0.00 35.68 2.62
414 415 7.606456 GGTGTTGGATCACTTACTAATCTGAAA 59.394 37.037 0.00 0.00 38.28 2.69
445 446 8.335532 TGTATGATCTGGGTTAAAAGTTTGAG 57.664 34.615 0.00 0.00 0.00 3.02
449 450 8.739972 GTTGATGTATGATCTGGGTTAAAAGTT 58.260 33.333 0.00 0.00 0.00 2.66
455 456 6.597672 GTGTTGTTGATGTATGATCTGGGTTA 59.402 38.462 0.00 0.00 0.00 2.85
458 459 4.034394 CGTGTTGTTGATGTATGATCTGGG 59.966 45.833 0.00 0.00 0.00 4.45
567 582 7.010160 AGGTTCATCACTAATTTCTTTTCCCA 58.990 34.615 0.00 0.00 0.00 4.37
568 583 7.468141 AGGTTCATCACTAATTTCTTTTCCC 57.532 36.000 0.00 0.00 0.00 3.97
588 603 7.453126 AGAGATCCATCATTTAGACGATAGGTT 59.547 37.037 0.00 0.00 43.77 3.50
590 611 7.403312 AGAGATCCATCATTTAGACGATAGG 57.597 40.000 0.00 0.00 43.77 2.57
612 633 1.599606 GCAGCACGAGAGGAGGAAGA 61.600 60.000 0.00 0.00 0.00 2.87
613 634 1.153667 GCAGCACGAGAGGAGGAAG 60.154 63.158 0.00 0.00 0.00 3.46
614 635 1.260538 ATGCAGCACGAGAGGAGGAA 61.261 55.000 0.00 0.00 0.00 3.36
617 638 2.172372 GCATGCAGCACGAGAGGAG 61.172 63.158 14.21 0.00 44.79 3.69
634 655 5.239359 TGAACAAATCACTCATATGCAGC 57.761 39.130 0.00 0.00 31.50 5.25
645 666 6.893958 AGTCGATCACTATGAACAAATCAC 57.106 37.500 0.00 0.00 41.93 3.06
651 2950 5.066117 GGACACTAGTCGATCACTATGAACA 59.934 44.000 0.00 0.00 45.92 3.18
686 2985 0.807496 GAACAGAGCAACCTCCATGC 59.193 55.000 0.00 0.00 44.15 4.06
687 2986 2.082231 CTGAACAGAGCAACCTCCATG 58.918 52.381 0.00 0.00 38.96 3.66
688 2987 1.004044 CCTGAACAGAGCAACCTCCAT 59.996 52.381 3.19 0.00 38.96 3.41
698 3042 1.271054 CCAGTTGGTCCCTGAACAGAG 60.271 57.143 3.19 0.00 28.15 3.35
773 3187 1.527696 GCATCACGAAACATTGCTCG 58.472 50.000 7.09 7.09 40.87 5.03
815 3229 0.876342 CCACTTCGCTTATCTCCGGC 60.876 60.000 0.00 0.00 0.00 6.13
816 3230 0.249489 CCCACTTCGCTTATCTCCGG 60.249 60.000 0.00 0.00 0.00 5.14
817 3231 0.876342 GCCCACTTCGCTTATCTCCG 60.876 60.000 0.00 0.00 0.00 4.63
818 3232 0.533085 GGCCCACTTCGCTTATCTCC 60.533 60.000 0.00 0.00 0.00 3.71
819 3233 0.466124 AGGCCCACTTCGCTTATCTC 59.534 55.000 0.00 0.00 0.00 2.75
820 3234 1.689273 CTAGGCCCACTTCGCTTATCT 59.311 52.381 0.00 0.00 0.00 1.98
821 3235 1.413077 ACTAGGCCCACTTCGCTTATC 59.587 52.381 0.00 0.00 0.00 1.75
822 3236 1.497161 ACTAGGCCCACTTCGCTTAT 58.503 50.000 0.00 0.00 0.00 1.73
823 3237 1.066430 CAACTAGGCCCACTTCGCTTA 60.066 52.381 0.00 0.00 0.00 3.09
824 3238 0.321653 CAACTAGGCCCACTTCGCTT 60.322 55.000 0.00 0.00 0.00 4.68
825 3239 1.296715 CAACTAGGCCCACTTCGCT 59.703 57.895 0.00 0.00 0.00 4.93
826 3240 1.745489 CCAACTAGGCCCACTTCGC 60.745 63.158 0.00 0.00 0.00 4.70
862 3276 3.992427 GTGGGTTTCTTTCGTTCTCGTAT 59.008 43.478 0.00 0.00 38.33 3.06
866 3280 3.003378 CCAAGTGGGTTTCTTTCGTTCTC 59.997 47.826 0.00 0.00 0.00 2.87
867 3281 2.949644 CCAAGTGGGTTTCTTTCGTTCT 59.050 45.455 0.00 0.00 0.00 3.01
870 3284 2.721425 TCCAAGTGGGTTTCTTTCGT 57.279 45.000 0.00 0.00 38.11 3.85
875 3289 2.490902 GGGTGAATCCAAGTGGGTTTCT 60.491 50.000 8.54 0.00 43.14 2.52
919 3333 4.171754 AGGCGTCGTTTGTTCTATTCTAC 58.828 43.478 0.00 0.00 0.00 2.59
920 3334 4.418392 GAGGCGTCGTTTGTTCTATTCTA 58.582 43.478 0.00 0.00 0.00 2.10
921 3335 3.251571 GAGGCGTCGTTTGTTCTATTCT 58.748 45.455 0.00 0.00 0.00 2.40
922 3336 2.347755 GGAGGCGTCGTTTGTTCTATTC 59.652 50.000 0.00 0.00 0.00 1.75
923 3337 2.289195 TGGAGGCGTCGTTTGTTCTATT 60.289 45.455 0.00 0.00 0.00 1.73
924 3338 1.274167 TGGAGGCGTCGTTTGTTCTAT 59.726 47.619 0.00 0.00 0.00 1.98
925 3339 0.675083 TGGAGGCGTCGTTTGTTCTA 59.325 50.000 0.00 0.00 0.00 2.10
927 3341 0.041576 GTTGGAGGCGTCGTTTGTTC 60.042 55.000 0.00 0.00 0.00 3.18
928 3342 1.441732 GGTTGGAGGCGTCGTTTGTT 61.442 55.000 0.00 0.00 0.00 2.83
929 3343 1.890510 GGTTGGAGGCGTCGTTTGT 60.891 57.895 0.00 0.00 0.00 2.83
931 3345 2.281276 GGGTTGGAGGCGTCGTTT 60.281 61.111 0.00 0.00 0.00 3.60
950 3381 1.878088 GTATGGAGGCGTCGATCTACA 59.122 52.381 7.21 0.00 0.00 2.74
1023 3470 0.834612 TGTCGTTGACTTCAAGGGGT 59.165 50.000 10.84 0.00 40.83 4.95
1576 4034 5.034852 TGAACCTTTGTTGAGATCAGACA 57.965 39.130 0.00 0.00 33.97 3.41
1666 4124 6.158260 ACCCAAGTATACCCTCCTTCATATT 58.842 40.000 0.00 0.00 0.00 1.28
2252 6716 9.453572 AATCAAGTGGCGATGACATTATTATAT 57.546 29.630 0.00 0.00 0.00 0.86
2268 6733 2.036346 AGCAAACCAAGAATCAAGTGGC 59.964 45.455 0.00 0.00 35.72 5.01
2292 6758 7.397192 TGAAAAGGAGGCTATAAGCTTTTGAAT 59.603 33.333 3.20 0.00 41.99 2.57
2295 6761 6.515272 TGAAAAGGAGGCTATAAGCTTTTG 57.485 37.500 3.20 0.00 41.99 2.44
2306 8209 2.592102 TCAGCAATGAAAAGGAGGCT 57.408 45.000 0.00 0.00 0.00 4.58
2307 8210 3.881937 ATTCAGCAATGAAAAGGAGGC 57.118 42.857 0.00 0.00 0.00 4.70
2308 8211 3.930848 GCAATTCAGCAATGAAAAGGAGG 59.069 43.478 0.00 0.00 0.00 4.30
2309 8212 4.562082 TGCAATTCAGCAATGAAAAGGAG 58.438 39.130 0.00 0.00 42.46 3.69
2310 8213 4.281435 TCTGCAATTCAGCAATGAAAAGGA 59.719 37.500 0.00 0.00 45.13 3.36
2311 8214 4.387862 GTCTGCAATTCAGCAATGAAAAGG 59.612 41.667 0.00 0.00 45.13 3.11
2312 8215 5.227908 AGTCTGCAATTCAGCAATGAAAAG 58.772 37.500 0.00 0.00 45.13 2.27
2313 8216 5.204409 AGTCTGCAATTCAGCAATGAAAA 57.796 34.783 0.00 0.00 45.13 2.29
2314 8217 4.859304 AGTCTGCAATTCAGCAATGAAA 57.141 36.364 0.00 0.00 45.13 2.69
2315 8218 4.859304 AAGTCTGCAATTCAGCAATGAA 57.141 36.364 0.00 0.00 45.13 2.57
2316 8219 4.038282 ACAAAGTCTGCAATTCAGCAATGA 59.962 37.500 0.00 0.00 45.13 2.57
2317 8220 4.304110 ACAAAGTCTGCAATTCAGCAATG 58.696 39.130 0.00 0.00 45.13 2.82
2318 8221 4.595762 ACAAAGTCTGCAATTCAGCAAT 57.404 36.364 0.00 0.00 45.13 3.56
2319 8222 4.389890 AACAAAGTCTGCAATTCAGCAA 57.610 36.364 0.00 0.00 45.13 3.91
2320 8223 4.114073 CAAACAAAGTCTGCAATTCAGCA 58.886 39.130 0.00 0.00 42.56 4.41
2321 8224 3.492011 CCAAACAAAGTCTGCAATTCAGC 59.508 43.478 0.00 0.00 42.56 4.26
2322 8225 4.685924 ACCAAACAAAGTCTGCAATTCAG 58.314 39.130 0.00 0.11 44.21 3.02
2323 8226 4.734398 ACCAAACAAAGTCTGCAATTCA 57.266 36.364 0.00 0.00 0.00 2.57
2324 8227 5.220643 CCAAACCAAACAAAGTCTGCAATTC 60.221 40.000 0.00 0.00 0.00 2.17
2325 8228 4.635324 CCAAACCAAACAAAGTCTGCAATT 59.365 37.500 0.00 0.00 0.00 2.32
2326 8229 4.081198 TCCAAACCAAACAAAGTCTGCAAT 60.081 37.500 0.00 0.00 0.00 3.56
2327 8230 3.259374 TCCAAACCAAACAAAGTCTGCAA 59.741 39.130 0.00 0.00 0.00 4.08
2328 8231 2.828520 TCCAAACCAAACAAAGTCTGCA 59.171 40.909 0.00 0.00 0.00 4.41
2329 8232 3.119137 AGTCCAAACCAAACAAAGTCTGC 60.119 43.478 0.00 0.00 0.00 4.26
2330 8233 4.718940 AGTCCAAACCAAACAAAGTCTG 57.281 40.909 0.00 0.00 0.00 3.51
2331 8234 5.738619 AAAGTCCAAACCAAACAAAGTCT 57.261 34.783 0.00 0.00 0.00 3.24
2332 8235 9.589111 TTATTAAAGTCCAAACCAAACAAAGTC 57.411 29.630 0.00 0.00 0.00 3.01
2333 8236 9.594478 CTTATTAAAGTCCAAACCAAACAAAGT 57.406 29.630 0.00 0.00 0.00 2.66
2334 8237 9.810545 TCTTATTAAAGTCCAAACCAAACAAAG 57.189 29.630 0.00 0.00 34.13 2.77
2336 8239 9.757227 CATCTTATTAAAGTCCAAACCAAACAA 57.243 29.630 0.00 0.00 34.13 2.83
2337 8240 8.364142 CCATCTTATTAAAGTCCAAACCAAACA 58.636 33.333 0.00 0.00 34.13 2.83
2338 8241 8.364894 ACCATCTTATTAAAGTCCAAACCAAAC 58.635 33.333 0.00 0.00 34.13 2.93
2339 8242 8.485578 ACCATCTTATTAAAGTCCAAACCAAA 57.514 30.769 0.00 0.00 34.13 3.28
2340 8243 7.094549 CGACCATCTTATTAAAGTCCAAACCAA 60.095 37.037 0.00 0.00 34.13 3.67
2341 8244 6.373216 CGACCATCTTATTAAAGTCCAAACCA 59.627 38.462 0.00 0.00 34.13 3.67
2342 8245 6.677187 GCGACCATCTTATTAAAGTCCAAACC 60.677 42.308 0.00 0.00 34.13 3.27
2343 8246 6.128117 TGCGACCATCTTATTAAAGTCCAAAC 60.128 38.462 0.00 0.00 34.13 2.93
2344 8247 5.941058 TGCGACCATCTTATTAAAGTCCAAA 59.059 36.000 0.00 0.00 34.13 3.28
2345 8248 5.492895 TGCGACCATCTTATTAAAGTCCAA 58.507 37.500 0.00 0.00 34.13 3.53
2346 8249 5.092554 TGCGACCATCTTATTAAAGTCCA 57.907 39.130 0.00 0.00 34.13 4.02
2347 8250 5.560953 GCATGCGACCATCTTATTAAAGTCC 60.561 44.000 0.00 0.00 34.13 3.85
2348 8251 5.007626 TGCATGCGACCATCTTATTAAAGTC 59.992 40.000 14.09 0.00 34.13 3.01
2349 8252 4.881273 TGCATGCGACCATCTTATTAAAGT 59.119 37.500 14.09 0.00 34.13 2.66
2350 8253 5.422666 TGCATGCGACCATCTTATTAAAG 57.577 39.130 14.09 0.00 0.00 1.85
2351 8254 5.334028 CGATGCATGCGACCATCTTATTAAA 60.334 40.000 14.09 0.00 36.55 1.52
2352 8255 4.152223 CGATGCATGCGACCATCTTATTAA 59.848 41.667 14.09 0.00 36.55 1.40
2353 8256 3.679502 CGATGCATGCGACCATCTTATTA 59.320 43.478 14.09 0.00 36.55 0.98
2354 8257 2.481568 CGATGCATGCGACCATCTTATT 59.518 45.455 14.09 0.00 36.55 1.40
2355 8258 2.071540 CGATGCATGCGACCATCTTAT 58.928 47.619 14.09 0.00 36.55 1.73
2356 8259 1.202521 ACGATGCATGCGACCATCTTA 60.203 47.619 20.36 0.00 36.55 2.10
2357 8260 0.462581 ACGATGCATGCGACCATCTT 60.463 50.000 20.36 0.95 36.55 2.40
2358 8261 0.462581 AACGATGCATGCGACCATCT 60.463 50.000 20.36 0.00 36.55 2.90
2359 8262 0.041839 GAACGATGCATGCGACCATC 60.042 55.000 20.36 9.35 35.61 3.51
2360 8263 1.439353 GGAACGATGCATGCGACCAT 61.439 55.000 20.36 0.00 0.00 3.55
2361 8264 2.106074 GGAACGATGCATGCGACCA 61.106 57.895 20.36 0.00 0.00 4.02
2362 8265 2.709475 GGAACGATGCATGCGACC 59.291 61.111 20.36 17.77 0.00 4.79
2375 8278 2.892425 CGGCCTCTGCATCGGAAC 60.892 66.667 0.00 0.00 40.13 3.62
2376 8279 4.161295 CCGGCCTCTGCATCGGAA 62.161 66.667 0.00 0.00 42.71 4.30
2378 8281 4.598894 CTCCGGCCTCTGCATCGG 62.599 72.222 0.00 0.00 41.82 4.18
2379 8282 4.598894 CCTCCGGCCTCTGCATCG 62.599 72.222 0.00 0.00 40.13 3.84
2380 8283 3.453070 GACCTCCGGCCTCTGCATC 62.453 68.421 0.00 0.00 40.13 3.91
2381 8284 3.474570 GACCTCCGGCCTCTGCAT 61.475 66.667 0.00 0.00 40.13 3.96
2383 8286 3.453070 GATGACCTCCGGCCTCTGC 62.453 68.421 0.00 0.00 0.00 4.26
2384 8287 2.801631 GGATGACCTCCGGCCTCTG 61.802 68.421 0.00 0.00 33.29 3.35
2385 8288 2.444895 GGATGACCTCCGGCCTCT 60.445 66.667 0.00 0.00 33.29 3.69
2409 8312 6.881602 TGCAAAGAAAAGGAGGCTTTTAAAAA 59.118 30.769 1.66 0.00 36.75 1.94
2410 8313 6.410540 TGCAAAGAAAAGGAGGCTTTTAAAA 58.589 32.000 0.00 0.00 36.75 1.52
2411 8314 5.983540 TGCAAAGAAAAGGAGGCTTTTAAA 58.016 33.333 0.00 0.00 36.75 1.52
2412 8315 5.606348 TGCAAAGAAAAGGAGGCTTTTAA 57.394 34.783 0.00 0.00 36.75 1.52
2413 8316 5.070313 ACATGCAAAGAAAAGGAGGCTTTTA 59.930 36.000 0.00 0.00 36.75 1.52
2414 8317 4.141642 ACATGCAAAGAAAAGGAGGCTTTT 60.142 37.500 0.00 0.00 39.00 2.27
2415 8318 3.389002 ACATGCAAAGAAAAGGAGGCTTT 59.611 39.130 0.00 0.00 32.46 3.51
2416 8319 2.967887 ACATGCAAAGAAAAGGAGGCTT 59.032 40.909 0.00 0.00 0.00 4.35
2535 8551 6.259893 TCACCAAGGGATTAAATGATTTCCA 58.740 36.000 0.00 0.00 0.00 3.53
2574 8590 7.202526 TGTTAATCAGCTTTGTTTCTTTCCAG 58.797 34.615 0.00 0.00 0.00 3.86
2830 9064 1.229975 CGCACCTGCACATGTCAAGA 61.230 55.000 0.00 0.00 42.21 3.02
2832 9066 1.227793 TCGCACCTGCACATGTCAA 60.228 52.632 0.00 0.00 42.21 3.18
2834 9068 2.393768 CCTCGCACCTGCACATGTC 61.394 63.158 0.00 0.00 42.21 3.06
2835 9069 2.359107 CCTCGCACCTGCACATGT 60.359 61.111 0.00 0.00 42.21 3.21
2836 9070 3.129502 CCCTCGCACCTGCACATG 61.130 66.667 0.00 0.00 42.21 3.21
2837 9071 3.320879 CTCCCTCGCACCTGCACAT 62.321 63.158 0.00 0.00 42.21 3.21
2838 9072 4.007644 CTCCCTCGCACCTGCACA 62.008 66.667 0.00 0.00 42.21 4.57
2860 9101 2.048597 CAGCGCCGGTTAGTGACA 60.049 61.111 2.29 0.00 0.00 3.58
3039 9291 1.656587 TGCACACCTAGATGAAGGGT 58.343 50.000 0.00 0.00 41.32 4.34
3040 9292 2.026822 ACTTGCACACCTAGATGAAGGG 60.027 50.000 0.00 0.00 41.32 3.95
3041 9293 3.265791 GACTTGCACACCTAGATGAAGG 58.734 50.000 0.00 0.00 42.82 3.46
3042 9294 3.681897 GTGACTTGCACACCTAGATGAAG 59.318 47.826 0.00 0.00 46.91 3.02
3043 9295 3.664107 GTGACTTGCACACCTAGATGAA 58.336 45.455 0.00 0.00 46.91 2.57
3044 9296 3.319137 GTGACTTGCACACCTAGATGA 57.681 47.619 0.00 0.00 46.91 2.92
3060 9312 8.806177 AAATTATTTGGTTTTCGTAAGGTGAC 57.194 30.769 0.00 0.00 38.47 3.67
3061 9313 8.630917 TGAAATTATTTGGTTTTCGTAAGGTGA 58.369 29.630 0.00 0.00 33.15 4.02
3062 9314 8.804688 TGAAATTATTTGGTTTTCGTAAGGTG 57.195 30.769 0.00 0.00 33.15 4.00
3063 9315 9.819267 TTTGAAATTATTTGGTTTTCGTAAGGT 57.181 25.926 0.00 0.00 33.15 3.50
3068 9320 9.157104 AGTGTTTTGAAATTATTTGGTTTTCGT 57.843 25.926 0.00 0.00 33.15 3.85
3069 9321 9.980780 AAGTGTTTTGAAATTATTTGGTTTTCG 57.019 25.926 0.00 0.00 33.15 3.46
3073 9325 9.051679 GCCTAAGTGTTTTGAAATTATTTGGTT 57.948 29.630 0.00 0.00 0.00 3.67
3074 9326 8.207545 TGCCTAAGTGTTTTGAAATTATTTGGT 58.792 29.630 0.00 0.00 0.00 3.67
3075 9327 8.495148 GTGCCTAAGTGTTTTGAAATTATTTGG 58.505 33.333 0.00 0.00 0.00 3.28
3076 9328 8.213812 CGTGCCTAAGTGTTTTGAAATTATTTG 58.786 33.333 0.00 0.00 0.00 2.32
3077 9329 7.383843 CCGTGCCTAAGTGTTTTGAAATTATTT 59.616 33.333 0.00 0.00 0.00 1.40
3078 9330 6.866248 CCGTGCCTAAGTGTTTTGAAATTATT 59.134 34.615 0.00 0.00 0.00 1.40
3079 9331 6.015772 ACCGTGCCTAAGTGTTTTGAAATTAT 60.016 34.615 0.00 0.00 0.00 1.28
3080 9332 5.299782 ACCGTGCCTAAGTGTTTTGAAATTA 59.700 36.000 0.00 0.00 0.00 1.40
3081 9333 4.098807 ACCGTGCCTAAGTGTTTTGAAATT 59.901 37.500 0.00 0.00 0.00 1.82
3082 9334 3.634910 ACCGTGCCTAAGTGTTTTGAAAT 59.365 39.130 0.00 0.00 0.00 2.17
3083 9335 3.018149 ACCGTGCCTAAGTGTTTTGAAA 58.982 40.909 0.00 0.00 0.00 2.69
3084 9336 2.645802 ACCGTGCCTAAGTGTTTTGAA 58.354 42.857 0.00 0.00 0.00 2.69
3085 9337 2.335316 ACCGTGCCTAAGTGTTTTGA 57.665 45.000 0.00 0.00 0.00 2.69
3086 9338 2.873472 TGTACCGTGCCTAAGTGTTTTG 59.127 45.455 0.00 0.00 0.00 2.44
3087 9339 3.196939 TGTACCGTGCCTAAGTGTTTT 57.803 42.857 0.00 0.00 0.00 2.43
3088 9340 2.914695 TGTACCGTGCCTAAGTGTTT 57.085 45.000 0.00 0.00 0.00 2.83
3089 9341 3.412237 AATGTACCGTGCCTAAGTGTT 57.588 42.857 0.00 0.00 0.00 3.32
3090 9342 4.020839 AGTTAATGTACCGTGCCTAAGTGT 60.021 41.667 0.00 0.00 0.00 3.55
3091 9343 4.501071 AGTTAATGTACCGTGCCTAAGTG 58.499 43.478 0.00 0.00 0.00 3.16
3092 9344 4.813750 AGTTAATGTACCGTGCCTAAGT 57.186 40.909 0.00 0.00 0.00 2.24
3093 9345 4.569564 GGAAGTTAATGTACCGTGCCTAAG 59.430 45.833 0.00 0.00 0.00 2.18
3094 9346 4.223477 AGGAAGTTAATGTACCGTGCCTAA 59.777 41.667 0.00 0.00 0.00 2.69
3095 9347 3.770933 AGGAAGTTAATGTACCGTGCCTA 59.229 43.478 0.00 0.00 0.00 3.93
3096 9348 2.570302 AGGAAGTTAATGTACCGTGCCT 59.430 45.455 0.00 0.00 0.00 4.75
3097 9349 2.981898 AGGAAGTTAATGTACCGTGCC 58.018 47.619 0.00 0.00 0.00 5.01
3098 9350 4.251268 AGAAGGAAGTTAATGTACCGTGC 58.749 43.478 0.00 0.00 0.00 5.34
3099 9351 4.561606 CGAGAAGGAAGTTAATGTACCGTG 59.438 45.833 0.00 0.00 0.00 4.94
3100 9352 4.219288 ACGAGAAGGAAGTTAATGTACCGT 59.781 41.667 0.00 0.00 0.00 4.83
3101 9353 4.741342 ACGAGAAGGAAGTTAATGTACCG 58.259 43.478 0.00 0.00 0.00 4.02
3102 9354 7.430992 AAAACGAGAAGGAAGTTAATGTACC 57.569 36.000 0.00 0.00 0.00 3.34
3126 9378 9.949174 CCATTCGTTGATATGTCATGAAATAAA 57.051 29.630 9.68 0.00 34.68 1.40
3127 9379 8.567104 CCCATTCGTTGATATGTCATGAAATAA 58.433 33.333 9.68 0.00 34.68 1.40
3128 9380 7.936301 TCCCATTCGTTGATATGTCATGAAATA 59.064 33.333 8.07 8.07 34.68 1.40
3129 9381 6.772233 TCCCATTCGTTGATATGTCATGAAAT 59.228 34.615 3.32 3.32 34.68 2.17
3130 9382 6.118852 TCCCATTCGTTGATATGTCATGAAA 58.881 36.000 0.00 0.00 34.68 2.69
3131 9383 5.679601 TCCCATTCGTTGATATGTCATGAA 58.320 37.500 0.00 9.16 35.16 2.57
3132 9384 5.070313 TCTCCCATTCGTTGATATGTCATGA 59.930 40.000 0.00 0.00 33.56 3.07
3133 9385 5.299949 TCTCCCATTCGTTGATATGTCATG 58.700 41.667 0.00 0.00 33.56 3.07
3134 9386 5.551305 TCTCCCATTCGTTGATATGTCAT 57.449 39.130 0.00 0.00 33.56 3.06
3135 9387 5.163311 ACATCTCCCATTCGTTGATATGTCA 60.163 40.000 0.00 0.00 0.00 3.58
3136 9388 5.178252 CACATCTCCCATTCGTTGATATGTC 59.822 44.000 0.00 0.00 0.00 3.06
3137 9389 5.059161 CACATCTCCCATTCGTTGATATGT 58.941 41.667 0.00 0.00 0.00 2.29
3138 9390 4.453478 CCACATCTCCCATTCGTTGATATG 59.547 45.833 0.00 0.00 0.00 1.78
3139 9391 4.505566 CCCACATCTCCCATTCGTTGATAT 60.506 45.833 0.00 0.00 0.00 1.63
3140 9392 3.181455 CCCACATCTCCCATTCGTTGATA 60.181 47.826 0.00 0.00 0.00 2.15
3141 9393 2.421952 CCCACATCTCCCATTCGTTGAT 60.422 50.000 0.00 0.00 0.00 2.57
3142 9394 1.065491 CCCACATCTCCCATTCGTTGA 60.065 52.381 0.00 0.00 0.00 3.18
3143 9395 1.382522 CCCACATCTCCCATTCGTTG 58.617 55.000 0.00 0.00 0.00 4.10
3144 9396 0.394352 GCCCACATCTCCCATTCGTT 60.394 55.000 0.00 0.00 0.00 3.85
3145 9397 1.224592 GCCCACATCTCCCATTCGT 59.775 57.895 0.00 0.00 0.00 3.85
3146 9398 1.526917 GGCCCACATCTCCCATTCG 60.527 63.158 0.00 0.00 0.00 3.34
3147 9399 1.526917 CGGCCCACATCTCCCATTC 60.527 63.158 0.00 0.00 0.00 2.67
3148 9400 2.308722 ACGGCCCACATCTCCCATT 61.309 57.895 0.00 0.00 0.00 3.16
3149 9401 2.692368 ACGGCCCACATCTCCCAT 60.692 61.111 0.00 0.00 0.00 4.00
3150 9402 3.716195 CACGGCCCACATCTCCCA 61.716 66.667 0.00 0.00 0.00 4.37
3152 9404 3.628646 AAGCACGGCCCACATCTCC 62.629 63.158 0.00 0.00 0.00 3.71
3153 9405 2.045926 AAGCACGGCCCACATCTC 60.046 61.111 0.00 0.00 0.00 2.75
3154 9406 2.360350 CAAGCACGGCCCACATCT 60.360 61.111 0.00 0.00 0.00 2.90
3155 9407 4.120331 GCAAGCACGGCCCACATC 62.120 66.667 0.00 0.00 0.00 3.06
3156 9408 4.666253 AGCAAGCACGGCCCACAT 62.666 61.111 0.00 0.00 0.00 3.21
3157 9409 4.892965 AAGCAAGCACGGCCCACA 62.893 61.111 0.00 0.00 0.00 4.17
3158 9410 3.558099 GAAAGCAAGCACGGCCCAC 62.558 63.158 0.00 0.00 0.00 4.61
3159 9411 3.294493 GAAAGCAAGCACGGCCCA 61.294 61.111 0.00 0.00 0.00 5.36
3160 9412 2.855514 TTGAAAGCAAGCACGGCCC 61.856 57.895 0.00 0.00 0.00 5.80
3161 9413 2.727544 TTGAAAGCAAGCACGGCC 59.272 55.556 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.