Multiple sequence alignment - TraesCS7B01G491400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G491400 chr7B 100.000 5045 0 0 1 5045 744225203 744230247 0.000000e+00 9317
1 TraesCS7B01G491400 chr7B 94.207 1053 47 6 4005 5045 743724468 743725518 0.000000e+00 1594
2 TraesCS7B01G491400 chr7B 86.012 1151 151 9 2858 4003 743652557 743653702 0.000000e+00 1225
3 TraesCS7B01G491400 chr7B 85.360 1168 162 8 2840 4003 745232130 745233292 0.000000e+00 1201
4 TraesCS7B01G491400 chr7B 85.103 1168 168 6 2846 4010 744337234 744336070 0.000000e+00 1188
5 TraesCS7B01G491400 chr7B 84.251 1181 177 6 869 2046 744295204 744294030 0.000000e+00 1142
6 TraesCS7B01G491400 chr7B 92.513 788 48 5 4269 5045 744054339 744055126 0.000000e+00 1118
7 TraesCS7B01G491400 chr7B 79.963 1602 244 48 990 2573 743650589 743652131 0.000000e+00 1109
8 TraesCS7B01G491400 chr7B 83.209 1209 192 8 869 2073 744247941 744249142 0.000000e+00 1098
9 TraesCS7B01G491400 chr7B 80.973 1377 238 14 701 2073 744007634 744006278 0.000000e+00 1070
10 TraesCS7B01G491400 chr7B 96.111 180 6 1 4005 4183 744054158 744054337 4.940000e-75 292
11 TraesCS7B01G491400 chr7B 94.681 94 4 1 458 550 724435007 724435100 1.460000e-30 145
12 TraesCS7B01G491400 chr7B 94.565 92 4 1 458 548 7074056 7073965 1.890000e-29 141
13 TraesCS7B01G491400 chr7B 93.684 95 5 1 455 548 7087868 7087962 1.890000e-29 141
14 TraesCS7B01G491400 chr7A 93.378 1193 78 1 2817 4009 736057637 736056446 0.000000e+00 1764
15 TraesCS7B01G491400 chr7A 89.546 1234 120 5 856 2086 736060597 736059370 0.000000e+00 1555
16 TraesCS7B01G491400 chr7A 85.531 1168 159 10 2840 4002 735844249 735843087 0.000000e+00 1212
17 TraesCS7B01G491400 chr7A 82.598 1201 194 11 866 2060 735902283 735903474 0.000000e+00 1046
18 TraesCS7B01G491400 chr7A 84.499 1058 152 8 998 2046 736329485 736328431 0.000000e+00 1035
19 TraesCS7B01G491400 chr7A 83.399 253 38 4 4442 4692 498945379 498945629 1.090000e-56 231
20 TraesCS7B01G491400 chr7A 77.810 347 28 23 132 459 736061247 736060931 8.690000e-38 169
21 TraesCS7B01G491400 chr7A 88.889 126 6 1 4928 5045 735931539 735931664 1.130000e-31 148
22 TraesCS7B01G491400 chr7D 87.287 1172 148 1 2839 4009 621261132 621262303 0.000000e+00 1338
23 TraesCS7B01G491400 chr7D 87.147 1167 142 8 2840 4002 632143080 632144242 0.000000e+00 1317
24 TraesCS7B01G491400 chr7D 85.862 1160 152 12 2850 4003 632081152 632082305 0.000000e+00 1223
25 TraesCS7B01G491400 chr7D 85.424 1180 161 10 2836 4008 632035160 632036335 0.000000e+00 1216
26 TraesCS7B01G491400 chr7D 85.739 1150 156 7 2858 4003 632098428 632099573 0.000000e+00 1208
27 TraesCS7B01G491400 chr7D 83.263 1189 190 6 869 2054 632096385 632097567 0.000000e+00 1085
28 TraesCS7B01G491400 chr1B 83.666 1151 178 9 2854 4001 577925931 577924788 0.000000e+00 1075
29 TraesCS7B01G491400 chr1B 83.672 1084 165 7 971 2046 577928826 577927747 0.000000e+00 1011
30 TraesCS7B01G491400 chr1B 92.000 100 7 1 452 550 625142403 625142502 6.810000e-29 139
31 TraesCS7B01G491400 chr5D 80.603 464 72 5 4442 4894 369032503 369032047 4.840000e-90 342
32 TraesCS7B01G491400 chr1D 78.692 474 72 17 4441 4896 362272221 362271759 6.390000e-74 289
33 TraesCS7B01G491400 chr5B 87.083 240 27 2 4127 4366 16680563 16680798 8.330000e-68 268
34 TraesCS7B01G491400 chr5B 88.889 144 14 2 4228 4370 8364169 8364311 5.190000e-40 176
35 TraesCS7B01G491400 chr5B 73.885 471 98 20 4442 4896 60086233 60085772 1.120000e-36 165
36 TraesCS7B01G491400 chr2B 87.054 224 28 1 4127 4349 53455708 53455931 8.380000e-63 252
37 TraesCS7B01G491400 chr2B 75.541 462 85 19 4447 4894 133813434 133813881 8.560000e-48 202
38 TraesCS7B01G491400 chr2B 81.897 232 36 6 4130 4359 210656806 210657033 1.850000e-44 191
39 TraesCS7B01G491400 chr2D 84.874 238 30 5 4128 4359 646042650 646042887 8.440000e-58 235
40 TraesCS7B01G491400 chr2D 75.378 463 85 20 4447 4894 81948787 81949235 3.980000e-46 196
41 TraesCS7B01G491400 chr2D 89.209 139 15 0 4228 4366 294620862 294620724 1.870000e-39 174
42 TraesCS7B01G491400 chrUn 74.675 462 99 15 4446 4896 132216981 132216527 6.670000e-44 189
43 TraesCS7B01G491400 chrUn 94.681 94 4 1 458 550 293082281 293082188 1.460000e-30 145
44 TraesCS7B01G491400 chrUn 93.684 95 5 1 457 550 43167024 43167118 1.890000e-29 141
45 TraesCS7B01G491400 chr5A 89.262 149 16 0 4228 4376 486981790 486981938 2.400000e-43 187
46 TraesCS7B01G491400 chr4D 89.437 142 14 1 4228 4368 399226917 399227058 1.440000e-40 178
47 TraesCS7B01G491400 chr4D 97.030 101 3 0 4127 4227 226455333 226455233 2.420000e-38 171
48 TraesCS7B01G491400 chr4A 96.040 101 4 0 4126 4226 518978796 518978896 1.120000e-36 165
49 TraesCS7B01G491400 chr1A 96.040 101 4 0 4127 4227 151337482 151337582 1.120000e-36 165
50 TraesCS7B01G491400 chr6B 94.681 94 4 1 458 550 101274064 101274157 1.460000e-30 145
51 TraesCS7B01G491400 chr3B 94.681 94 4 1 458 550 30337565 30337658 1.460000e-30 145
52 TraesCS7B01G491400 chr4B 93.750 96 5 1 456 550 599082094 599082189 5.270000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G491400 chr7B 744225203 744230247 5044 False 9317.000000 9317 100.000000 1 5045 1 chr7B.!!$F4 5044
1 TraesCS7B01G491400 chr7B 743724468 743725518 1050 False 1594.000000 1594 94.207000 4005 5045 1 chr7B.!!$F3 1040
2 TraesCS7B01G491400 chr7B 745232130 745233292 1162 False 1201.000000 1201 85.360000 2840 4003 1 chr7B.!!$F6 1163
3 TraesCS7B01G491400 chr7B 744336070 744337234 1164 True 1188.000000 1188 85.103000 2846 4010 1 chr7B.!!$R4 1164
4 TraesCS7B01G491400 chr7B 743650589 743653702 3113 False 1167.000000 1225 82.987500 990 4003 2 chr7B.!!$F7 3013
5 TraesCS7B01G491400 chr7B 744294030 744295204 1174 True 1142.000000 1142 84.251000 869 2046 1 chr7B.!!$R3 1177
6 TraesCS7B01G491400 chr7B 744247941 744249142 1201 False 1098.000000 1098 83.209000 869 2073 1 chr7B.!!$F5 1204
7 TraesCS7B01G491400 chr7B 744006278 744007634 1356 True 1070.000000 1070 80.973000 701 2073 1 chr7B.!!$R2 1372
8 TraesCS7B01G491400 chr7B 744054158 744055126 968 False 705.000000 1118 94.312000 4005 5045 2 chr7B.!!$F8 1040
9 TraesCS7B01G491400 chr7A 735843087 735844249 1162 True 1212.000000 1212 85.531000 2840 4002 1 chr7A.!!$R1 1162
10 TraesCS7B01G491400 chr7A 736056446 736061247 4801 True 1162.666667 1764 86.911333 132 4009 3 chr7A.!!$R3 3877
11 TraesCS7B01G491400 chr7A 735902283 735903474 1191 False 1046.000000 1046 82.598000 866 2060 1 chr7A.!!$F2 1194
12 TraesCS7B01G491400 chr7A 736328431 736329485 1054 True 1035.000000 1035 84.499000 998 2046 1 chr7A.!!$R2 1048
13 TraesCS7B01G491400 chr7D 621261132 621262303 1171 False 1338.000000 1338 87.287000 2839 4009 1 chr7D.!!$F1 1170
14 TraesCS7B01G491400 chr7D 632143080 632144242 1162 False 1317.000000 1317 87.147000 2840 4002 1 chr7D.!!$F4 1162
15 TraesCS7B01G491400 chr7D 632081152 632082305 1153 False 1223.000000 1223 85.862000 2850 4003 1 chr7D.!!$F3 1153
16 TraesCS7B01G491400 chr7D 632035160 632036335 1175 False 1216.000000 1216 85.424000 2836 4008 1 chr7D.!!$F2 1172
17 TraesCS7B01G491400 chr7D 632096385 632099573 3188 False 1146.500000 1208 84.501000 869 4003 2 chr7D.!!$F5 3134
18 TraesCS7B01G491400 chr1B 577924788 577928826 4038 True 1043.000000 1075 83.669000 971 4001 2 chr1B.!!$R1 3030

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.028505 CTCCTGCAATGCCGATTTCG 59.971 55.0 1.53 0.0 39.44 3.46 F
625 662 0.107017 CTCCATTCAATGCCCCTCGT 60.107 55.0 0.00 0.0 0.00 4.18 F
1897 1999 0.038744 ATGGGAGGGTGTGCTCAAAG 59.961 55.0 0.00 0.0 0.00 2.77 F
1899 2001 0.178990 GGGAGGGTGTGCTCAAAGTT 60.179 55.0 0.00 0.0 0.00 2.66 F
1935 2040 0.392193 CTTCAGGCAGCCGAGTCATT 60.392 55.0 5.55 0.0 0.00 2.57 F
2869 4888 0.522180 ACGTTCGCAGGTACTCTCAG 59.478 55.0 0.00 0.0 34.60 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1800 1902 0.035458 CCTTGAGGCTTCGGTGAAGT 59.965 55.0 8.23 0.00 41.27 3.01 R
2246 3960 0.686789 GGAAAGCCCAATTGGTGCTT 59.313 50.0 31.36 31.36 46.41 3.91 R
2851 4870 0.179161 CCTGAGAGTACCTGCGAACG 60.179 60.0 0.00 0.00 0.00 3.95 R
3360 5383 0.248296 CTCCGTCTTGAGCTACGAGC 60.248 60.0 8.30 0.00 41.55 5.03 R
3672 5698 0.251742 TCTTGCCAATGTTCCCAGGG 60.252 55.0 0.00 0.00 0.00 4.45 R
4753 6782 0.179018 GGCGCAGGGGATTCATAACT 60.179 55.0 10.83 0.00 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.755696 TTATTTGATTAGTTTGTTGTGATGCC 57.244 30.769 0.00 0.00 0.00 4.40
32 33 4.782019 TGATTAGTTTGTTGTGATGCCC 57.218 40.909 0.00 0.00 0.00 5.36
33 34 3.190327 TGATTAGTTTGTTGTGATGCCCG 59.810 43.478 0.00 0.00 0.00 6.13
34 35 2.552599 TAGTTTGTTGTGATGCCCGA 57.447 45.000 0.00 0.00 0.00 5.14
35 36 1.909700 AGTTTGTTGTGATGCCCGAT 58.090 45.000 0.00 0.00 0.00 4.18
36 37 3.066291 AGTTTGTTGTGATGCCCGATA 57.934 42.857 0.00 0.00 0.00 2.92
37 38 3.417101 AGTTTGTTGTGATGCCCGATAA 58.583 40.909 0.00 0.00 0.00 1.75
38 39 3.190535 AGTTTGTTGTGATGCCCGATAAC 59.809 43.478 0.00 0.00 0.00 1.89
39 40 2.481289 TGTTGTGATGCCCGATAACA 57.519 45.000 0.00 0.00 0.00 2.41
40 41 2.997980 TGTTGTGATGCCCGATAACAT 58.002 42.857 0.00 0.00 0.00 2.71
41 42 2.942376 TGTTGTGATGCCCGATAACATC 59.058 45.455 0.00 0.00 42.46 3.06
42 43 2.254546 TGTGATGCCCGATAACATCC 57.745 50.000 0.00 0.00 41.63 3.51
43 44 1.488393 TGTGATGCCCGATAACATCCA 59.512 47.619 0.00 0.00 41.63 3.41
44 45 2.146342 GTGATGCCCGATAACATCCAG 58.854 52.381 0.00 0.00 41.63 3.86
45 46 1.768275 TGATGCCCGATAACATCCAGT 59.232 47.619 0.00 0.00 41.63 4.00
46 47 2.146342 GATGCCCGATAACATCCAGTG 58.854 52.381 0.00 0.00 37.33 3.66
47 48 0.463654 TGCCCGATAACATCCAGTGC 60.464 55.000 0.00 0.00 0.00 4.40
48 49 0.463654 GCCCGATAACATCCAGTGCA 60.464 55.000 0.00 0.00 0.00 4.57
49 50 1.815408 GCCCGATAACATCCAGTGCAT 60.815 52.381 0.00 0.00 0.00 3.96
50 51 1.875514 CCCGATAACATCCAGTGCATG 59.124 52.381 0.00 0.00 0.00 4.06
51 52 2.564771 CCGATAACATCCAGTGCATGT 58.435 47.619 0.00 0.00 35.94 3.21
52 53 2.545526 CCGATAACATCCAGTGCATGTC 59.454 50.000 0.00 0.00 33.12 3.06
53 54 3.197265 CGATAACATCCAGTGCATGTCA 58.803 45.455 0.00 0.00 33.12 3.58
54 55 3.246936 CGATAACATCCAGTGCATGTCAG 59.753 47.826 0.00 0.00 33.12 3.51
55 56 1.171308 AACATCCAGTGCATGTCAGC 58.829 50.000 0.00 0.00 33.12 4.26
56 57 0.327259 ACATCCAGTGCATGTCAGCT 59.673 50.000 0.00 0.00 34.99 4.24
57 58 1.015109 CATCCAGTGCATGTCAGCTC 58.985 55.000 0.00 0.00 34.99 4.09
58 59 0.616891 ATCCAGTGCATGTCAGCTCA 59.383 50.000 0.00 0.00 34.99 4.26
59 60 0.397564 TCCAGTGCATGTCAGCTCAA 59.602 50.000 0.00 0.00 34.99 3.02
60 61 0.803117 CCAGTGCATGTCAGCTCAAG 59.197 55.000 0.00 0.00 34.99 3.02
61 62 1.609841 CCAGTGCATGTCAGCTCAAGA 60.610 52.381 0.00 0.00 34.99 3.02
62 63 1.463831 CAGTGCATGTCAGCTCAAGAC 59.536 52.381 0.00 0.00 36.55 3.01
63 64 0.801251 GTGCATGTCAGCTCAAGACC 59.199 55.000 0.00 0.00 35.15 3.85
64 65 0.321919 TGCATGTCAGCTCAAGACCC 60.322 55.000 0.00 0.00 35.15 4.46
65 66 0.035630 GCATGTCAGCTCAAGACCCT 60.036 55.000 0.00 0.00 35.15 4.34
66 67 1.735386 CATGTCAGCTCAAGACCCTG 58.265 55.000 0.62 0.00 35.15 4.45
67 68 0.617413 ATGTCAGCTCAAGACCCTGG 59.383 55.000 0.62 0.00 35.15 4.45
68 69 1.298014 GTCAGCTCAAGACCCTGGG 59.702 63.158 12.28 12.28 0.00 4.45
69 70 1.152030 TCAGCTCAAGACCCTGGGT 60.152 57.895 20.72 20.72 39.44 4.51
70 71 1.002868 CAGCTCAAGACCCTGGGTG 60.003 63.158 26.16 9.55 35.25 4.61
71 72 1.462238 AGCTCAAGACCCTGGGTGT 60.462 57.895 26.16 18.14 35.25 4.16
72 73 0.178903 AGCTCAAGACCCTGGGTGTA 60.179 55.000 26.16 3.91 35.25 2.90
73 74 0.250513 GCTCAAGACCCTGGGTGTAG 59.749 60.000 26.16 15.65 35.25 2.74
74 75 1.645710 CTCAAGACCCTGGGTGTAGT 58.354 55.000 26.16 1.38 35.25 2.73
75 76 1.550976 CTCAAGACCCTGGGTGTAGTC 59.449 57.143 26.16 8.41 35.25 2.59
76 77 0.246635 CAAGACCCTGGGTGTAGTCG 59.753 60.000 26.16 5.19 35.25 4.18
77 78 1.542187 AAGACCCTGGGTGTAGTCGC 61.542 60.000 26.16 6.75 35.25 5.19
78 79 3.352338 GACCCTGGGTGTAGTCGCG 62.352 68.421 26.16 0.00 35.25 5.87
79 80 4.814294 CCCTGGGTGTAGTCGCGC 62.814 72.222 3.97 0.00 37.50 6.86
80 81 4.063967 CCTGGGTGTAGTCGCGCA 62.064 66.667 8.75 0.00 42.96 6.09
81 82 2.184322 CTGGGTGTAGTCGCGCAT 59.816 61.111 8.75 0.00 43.84 4.73
82 83 2.125713 TGGGTGTAGTCGCGCATG 60.126 61.111 8.75 0.00 40.96 4.06
83 84 3.564027 GGGTGTAGTCGCGCATGC 61.564 66.667 7.91 7.91 37.06 4.06
84 85 2.813474 GGTGTAGTCGCGCATGCA 60.813 61.111 19.57 0.00 42.97 3.96
85 86 2.387445 GGTGTAGTCGCGCATGCAA 61.387 57.895 19.57 0.00 42.97 4.08
86 87 1.705337 GGTGTAGTCGCGCATGCAAT 61.705 55.000 19.57 0.00 42.97 3.56
87 88 0.315382 GTGTAGTCGCGCATGCAATC 60.315 55.000 19.57 5.00 42.97 2.67
88 89 0.460109 TGTAGTCGCGCATGCAATCT 60.460 50.000 19.57 12.01 42.97 2.40
89 90 0.042708 GTAGTCGCGCATGCAATCTG 60.043 55.000 19.57 1.33 42.97 2.90
90 91 0.460109 TAGTCGCGCATGCAATCTGT 60.460 50.000 19.57 0.00 42.97 3.41
91 92 1.135315 GTCGCGCATGCAATCTGTT 59.865 52.632 19.57 0.00 42.97 3.16
92 93 1.129879 GTCGCGCATGCAATCTGTTG 61.130 55.000 19.57 0.00 42.97 3.33
93 94 1.135108 CGCGCATGCAATCTGTTGA 59.865 52.632 19.57 0.00 42.97 3.18
94 95 0.454789 CGCGCATGCAATCTGTTGAA 60.455 50.000 19.57 0.00 42.97 2.69
95 96 1.796253 CGCGCATGCAATCTGTTGAAT 60.796 47.619 19.57 0.00 42.97 2.57
96 97 1.850441 GCGCATGCAATCTGTTGAATC 59.150 47.619 19.57 0.00 42.15 2.52
97 98 2.479049 GCGCATGCAATCTGTTGAATCT 60.479 45.455 19.57 0.00 42.15 2.40
98 99 3.766151 CGCATGCAATCTGTTGAATCTT 58.234 40.909 19.57 0.00 37.53 2.40
99 100 4.171005 CGCATGCAATCTGTTGAATCTTT 58.829 39.130 19.57 0.00 37.53 2.52
100 101 4.031314 CGCATGCAATCTGTTGAATCTTTG 59.969 41.667 19.57 0.00 37.53 2.77
101 102 4.201685 GCATGCAATCTGTTGAATCTTTGC 60.202 41.667 14.21 0.00 39.78 3.68
102 103 4.859304 TGCAATCTGTTGAATCTTTGCT 57.141 36.364 6.94 0.00 39.98 3.91
103 104 5.204409 TGCAATCTGTTGAATCTTTGCTT 57.796 34.783 6.94 0.00 39.98 3.91
104 105 4.986034 TGCAATCTGTTGAATCTTTGCTTG 59.014 37.500 6.94 0.00 39.98 4.01
105 106 5.221283 TGCAATCTGTTGAATCTTTGCTTGA 60.221 36.000 6.94 0.00 39.98 3.02
106 107 5.118203 GCAATCTGTTGAATCTTTGCTTGAC 59.882 40.000 0.00 0.00 37.53 3.18
107 108 4.836125 TCTGTTGAATCTTTGCTTGACC 57.164 40.909 0.00 0.00 0.00 4.02
108 109 4.464008 TCTGTTGAATCTTTGCTTGACCT 58.536 39.130 0.00 0.00 0.00 3.85
109 110 4.276678 TCTGTTGAATCTTTGCTTGACCTG 59.723 41.667 0.00 0.00 0.00 4.00
110 111 4.206375 TGTTGAATCTTTGCTTGACCTGA 58.794 39.130 0.00 0.00 0.00 3.86
111 112 4.828939 TGTTGAATCTTTGCTTGACCTGAT 59.171 37.500 0.00 0.00 0.00 2.90
112 113 6.003326 TGTTGAATCTTTGCTTGACCTGATA 58.997 36.000 0.00 0.00 0.00 2.15
113 114 6.660521 TGTTGAATCTTTGCTTGACCTGATAT 59.339 34.615 0.00 0.00 0.00 1.63
114 115 7.177216 TGTTGAATCTTTGCTTGACCTGATATT 59.823 33.333 0.00 0.00 0.00 1.28
115 116 7.092137 TGAATCTTTGCTTGACCTGATATTG 57.908 36.000 0.00 0.00 0.00 1.90
116 117 4.970662 TCTTTGCTTGACCTGATATTGC 57.029 40.909 0.00 0.00 0.00 3.56
117 118 4.592942 TCTTTGCTTGACCTGATATTGCT 58.407 39.130 0.00 0.00 0.00 3.91
118 119 4.637534 TCTTTGCTTGACCTGATATTGCTC 59.362 41.667 0.00 0.00 0.00 4.26
119 120 2.923121 TGCTTGACCTGATATTGCTCC 58.077 47.619 0.00 0.00 0.00 4.70
120 121 2.507058 TGCTTGACCTGATATTGCTCCT 59.493 45.455 0.00 0.00 0.00 3.69
121 122 2.877168 GCTTGACCTGATATTGCTCCTG 59.123 50.000 0.00 0.00 0.00 3.86
122 123 2.627515 TGACCTGATATTGCTCCTGC 57.372 50.000 0.00 0.00 40.20 4.85
132 133 3.518003 GCTCCTGCAATGCCGATT 58.482 55.556 1.53 0.00 39.41 3.34
133 134 1.811860 GCTCCTGCAATGCCGATTT 59.188 52.632 1.53 0.00 39.41 2.17
134 135 0.248784 GCTCCTGCAATGCCGATTTC 60.249 55.000 1.53 0.00 39.41 2.17
135 136 0.028505 CTCCTGCAATGCCGATTTCG 59.971 55.000 1.53 0.00 39.44 3.46
136 137 0.392327 TCCTGCAATGCCGATTTCGA 60.392 50.000 1.53 0.00 43.02 3.71
137 138 0.451383 CCTGCAATGCCGATTTCGAA 59.549 50.000 1.53 0.00 43.02 3.71
138 139 1.538276 CTGCAATGCCGATTTCGAAC 58.462 50.000 1.53 0.00 43.02 3.95
139 140 1.131126 CTGCAATGCCGATTTCGAACT 59.869 47.619 1.53 0.00 43.02 3.01
140 141 1.130373 TGCAATGCCGATTTCGAACTC 59.870 47.619 1.53 0.38 43.02 3.01
141 142 1.398390 GCAATGCCGATTTCGAACTCT 59.602 47.619 12.93 0.00 43.02 3.24
142 143 2.789092 GCAATGCCGATTTCGAACTCTG 60.789 50.000 12.93 8.03 43.02 3.35
143 144 2.386661 ATGCCGATTTCGAACTCTGT 57.613 45.000 12.93 0.00 43.02 3.41
144 145 2.163818 TGCCGATTTCGAACTCTGTT 57.836 45.000 12.93 0.00 43.02 3.16
145 146 2.489971 TGCCGATTTCGAACTCTGTTT 58.510 42.857 12.93 0.00 43.02 2.83
146 147 3.655486 TGCCGATTTCGAACTCTGTTTA 58.345 40.909 12.93 0.00 43.02 2.01
147 148 4.250464 TGCCGATTTCGAACTCTGTTTAT 58.750 39.130 12.93 0.00 43.02 1.40
148 149 4.092821 TGCCGATTTCGAACTCTGTTTATG 59.907 41.667 12.93 0.00 43.02 1.90
149 150 4.092968 GCCGATTTCGAACTCTGTTTATGT 59.907 41.667 12.93 0.00 43.02 2.29
150 151 5.290158 GCCGATTTCGAACTCTGTTTATGTA 59.710 40.000 12.93 0.00 43.02 2.29
151 152 6.183360 GCCGATTTCGAACTCTGTTTATGTAA 60.183 38.462 12.93 0.00 43.02 2.41
252 270 3.117851 TGGTTCACATGAGTTGGGTTACA 60.118 43.478 0.00 0.00 0.00 2.41
259 277 8.731275 TCACATGAGTTGGGTTACATTTATAG 57.269 34.615 0.00 0.00 0.00 1.31
261 279 9.607988 CACATGAGTTGGGTTACATTTATAGTA 57.392 33.333 0.00 0.00 0.00 1.82
266 284 9.826574 GAGTTGGGTTACATTTATAGTACATCA 57.173 33.333 0.00 0.00 0.00 3.07
270 288 9.607988 TGGGTTACATTTATAGTACATCAGTTG 57.392 33.333 0.00 0.00 0.00 3.16
271 289 9.052759 GGGTTACATTTATAGTACATCAGTTGG 57.947 37.037 0.00 0.00 0.00 3.77
272 290 9.052759 GGTTACATTTATAGTACATCAGTTGGG 57.947 37.037 0.00 0.00 0.00 4.12
273 291 9.609346 GTTACATTTATAGTACATCAGTTGGGT 57.391 33.333 0.00 0.00 0.00 4.51
276 294 9.609346 ACATTTATAGTACATCAGTTGGGTTAC 57.391 33.333 0.00 0.00 0.00 2.50
277 295 9.607988 CATTTATAGTACATCAGTTGGGTTACA 57.392 33.333 0.00 0.00 0.00 2.41
284 302 9.832445 AGTACATCAGTTGGGTTACATTTATAG 57.168 33.333 0.00 0.00 0.00 1.31
285 303 9.609346 GTACATCAGTTGGGTTACATTTATAGT 57.391 33.333 0.00 0.00 0.00 2.12
287 305 9.609346 ACATCAGTTGGGTTACATTTATAGTAC 57.391 33.333 0.00 0.00 0.00 2.73
288 306 9.607988 CATCAGTTGGGTTACATTTATAGTACA 57.392 33.333 0.00 0.00 0.00 2.90
290 308 9.826574 TCAGTTGGGTTACATTTATAGTACATC 57.173 33.333 0.00 0.00 0.00 3.06
291 309 9.607988 CAGTTGGGTTACATTTATAGTACATCA 57.392 33.333 0.00 0.00 0.00 3.07
292 310 9.832445 AGTTGGGTTACATTTATAGTACATCAG 57.168 33.333 0.00 0.00 0.00 2.90
293 311 9.609346 GTTGGGTTACATTTATAGTACATCAGT 57.391 33.333 0.00 0.00 0.00 3.41
312 330 9.265901 ACATCAGTTTATATGAAGTATGTGCTC 57.734 33.333 0.00 0.00 27.54 4.26
325 343 6.699575 AGTATGTGCTCAAAGTTTCAGTTT 57.300 33.333 0.00 0.00 0.00 2.66
327 345 8.396272 AGTATGTGCTCAAAGTTTCAGTTTAT 57.604 30.769 0.00 0.00 0.00 1.40
352 370 3.951037 TGCTTGTTGAGTTGTACATGGTT 59.049 39.130 0.00 0.00 0.00 3.67
354 372 4.036262 GCTTGTTGAGTTGTACATGGTTCA 59.964 41.667 0.00 0.00 0.00 3.18
358 376 6.061441 TGTTGAGTTGTACATGGTTCATCTT 58.939 36.000 0.00 0.00 0.00 2.40
365 383 0.458669 CATGGTTCATCTTGCCAGCC 59.541 55.000 0.00 0.00 35.56 4.85
381 399 1.615392 CAGCCCTCCTTTTGTTCCAAG 59.385 52.381 0.00 0.00 0.00 3.61
384 402 1.615392 CCCTCCTTTTGTTCCAAGCTG 59.385 52.381 0.00 0.00 0.00 4.24
390 408 3.005684 CCTTTTGTTCCAAGCTGCATGTA 59.994 43.478 1.02 0.00 0.00 2.29
421 458 9.974980 TGGAAAGTTAAACTAATGGCTAAAAAG 57.025 29.630 0.00 0.00 0.00 2.27
451 488 3.542648 AGATCAGCAACATGACATCAGG 58.457 45.455 0.00 0.00 30.46 3.86
459 496 2.811410 ACATGACATCAGGCCATGTTT 58.189 42.857 5.01 0.00 45.91 2.83
461 498 3.579586 ACATGACATCAGGCCATGTTTTT 59.420 39.130 5.01 0.00 45.91 1.94
514 551 9.146984 TCATAAAGATTAAAGTACAAGTCACGG 57.853 33.333 0.00 0.00 0.00 4.94
515 552 6.796705 AAAGATTAAAGTACAAGTCACGGG 57.203 37.500 0.00 0.00 0.00 5.28
516 553 5.733620 AGATTAAAGTACAAGTCACGGGA 57.266 39.130 0.00 0.00 0.00 5.14
517 554 5.721232 AGATTAAAGTACAAGTCACGGGAG 58.279 41.667 0.00 0.00 0.00 4.30
518 555 2.833631 AAAGTACAAGTCACGGGAGG 57.166 50.000 0.00 0.00 0.00 4.30
519 556 2.005370 AAGTACAAGTCACGGGAGGA 57.995 50.000 0.00 0.00 0.00 3.71
520 557 1.254954 AGTACAAGTCACGGGAGGAC 58.745 55.000 0.00 0.00 35.50 3.85
521 558 0.245813 GTACAAGTCACGGGAGGACC 59.754 60.000 0.00 0.00 35.89 4.46
530 567 3.708210 GGGAGGACCGACATGACA 58.292 61.111 0.00 0.00 36.97 3.58
531 568 1.980052 GGGAGGACCGACATGACAA 59.020 57.895 0.00 0.00 36.97 3.18
532 569 0.323629 GGGAGGACCGACATGACAAA 59.676 55.000 0.00 0.00 36.97 2.83
533 570 1.271163 GGGAGGACCGACATGACAAAA 60.271 52.381 0.00 0.00 36.97 2.44
534 571 2.618045 GGGAGGACCGACATGACAAAAT 60.618 50.000 0.00 0.00 36.97 1.82
535 572 3.081804 GGAGGACCGACATGACAAAATT 58.918 45.455 0.00 0.00 0.00 1.82
536 573 3.119849 GGAGGACCGACATGACAAAATTG 60.120 47.826 0.00 0.00 0.00 2.32
537 574 3.750371 AGGACCGACATGACAAAATTGA 58.250 40.909 0.00 0.00 0.00 2.57
538 575 4.141287 AGGACCGACATGACAAAATTGAA 58.859 39.130 0.00 0.00 0.00 2.69
539 576 4.582656 AGGACCGACATGACAAAATTGAAA 59.417 37.500 0.00 0.00 0.00 2.69
540 577 5.068460 AGGACCGACATGACAAAATTGAAAA 59.932 36.000 0.00 0.00 0.00 2.29
541 578 5.402270 GGACCGACATGACAAAATTGAAAAG 59.598 40.000 0.00 0.00 0.00 2.27
542 579 6.142818 ACCGACATGACAAAATTGAAAAGA 57.857 33.333 0.00 0.00 0.00 2.52
543 580 6.748132 ACCGACATGACAAAATTGAAAAGAT 58.252 32.000 0.00 0.00 0.00 2.40
544 581 7.881142 ACCGACATGACAAAATTGAAAAGATA 58.119 30.769 0.00 0.00 0.00 1.98
545 582 8.023128 ACCGACATGACAAAATTGAAAAGATAG 58.977 33.333 0.00 0.00 0.00 2.08
546 583 7.008628 CCGACATGACAAAATTGAAAAGATAGC 59.991 37.037 0.00 0.00 0.00 2.97
547 584 7.538334 CGACATGACAAAATTGAAAAGATAGCA 59.462 33.333 0.00 0.00 0.00 3.49
548 585 8.752766 ACATGACAAAATTGAAAAGATAGCAG 57.247 30.769 0.00 0.00 0.00 4.24
549 586 8.579006 ACATGACAAAATTGAAAAGATAGCAGA 58.421 29.630 0.00 0.00 0.00 4.26
550 587 9.582431 CATGACAAAATTGAAAAGATAGCAGAT 57.418 29.630 0.00 0.00 0.00 2.90
551 588 8.975410 TGACAAAATTGAAAAGATAGCAGATG 57.025 30.769 0.00 0.00 0.00 2.90
552 589 8.579006 TGACAAAATTGAAAAGATAGCAGATGT 58.421 29.630 0.00 0.00 0.00 3.06
553 590 9.415544 GACAAAATTGAAAAGATAGCAGATGTT 57.584 29.630 0.00 0.00 0.00 2.71
570 607 9.494271 AGCAGATGTTATTTCATCATAATACGT 57.506 29.630 8.93 0.00 44.46 3.57
571 608 9.533983 GCAGATGTTATTTCATCATAATACGTG 57.466 33.333 0.00 0.00 44.46 4.49
576 613 9.810545 TGTTATTTCATCATAATACGTGTCTCA 57.189 29.630 0.00 0.00 0.00 3.27
580 617 8.940768 TTTCATCATAATACGTGTCTCATTCA 57.059 30.769 0.00 0.00 0.00 2.57
581 618 8.940768 TTCATCATAATACGTGTCTCATTCAA 57.059 30.769 0.00 0.00 0.00 2.69
582 619 9.546428 TTCATCATAATACGTGTCTCATTCAAT 57.454 29.630 0.00 0.00 0.00 2.57
583 620 8.981647 TCATCATAATACGTGTCTCATTCAATG 58.018 33.333 0.00 0.00 0.00 2.82
584 621 7.177498 TCATAATACGTGTCTCATTCAATGC 57.823 36.000 0.00 0.00 0.00 3.56
585 622 6.760770 TCATAATACGTGTCTCATTCAATGCA 59.239 34.615 0.00 0.00 0.00 3.96
586 623 5.475273 AATACGTGTCTCATTCAATGCAG 57.525 39.130 0.00 0.00 0.00 4.41
587 624 1.466167 ACGTGTCTCATTCAATGCAGC 59.534 47.619 0.00 0.00 0.00 5.25
588 625 1.736126 CGTGTCTCATTCAATGCAGCT 59.264 47.619 0.00 0.00 0.00 4.24
589 626 2.475685 CGTGTCTCATTCAATGCAGCTG 60.476 50.000 10.11 10.11 0.00 4.24
590 627 2.486982 GTGTCTCATTCAATGCAGCTGT 59.513 45.455 16.64 0.00 0.00 4.40
591 628 2.745821 TGTCTCATTCAATGCAGCTGTC 59.254 45.455 16.64 8.39 0.00 3.51
592 629 3.008330 GTCTCATTCAATGCAGCTGTCT 58.992 45.455 16.64 0.00 0.00 3.41
593 630 3.007635 TCTCATTCAATGCAGCTGTCTG 58.992 45.455 16.64 10.27 43.16 3.51
618 655 7.012327 TGCTACTGTTATTACTCCATTCAATGC 59.988 37.037 0.00 0.00 0.00 3.56
622 659 3.979501 ATTACTCCATTCAATGCCCCT 57.020 42.857 0.00 0.00 0.00 4.79
625 662 0.107017 CTCCATTCAATGCCCCTCGT 60.107 55.000 0.00 0.00 0.00 4.18
627 664 1.562008 TCCATTCAATGCCCCTCGTAA 59.438 47.619 0.00 0.00 0.00 3.18
639 676 1.679680 CCCTCGTAATCTCACGCCTTA 59.320 52.381 0.00 0.00 41.67 2.69
640 677 2.100252 CCCTCGTAATCTCACGCCTTAA 59.900 50.000 0.00 0.00 41.67 1.85
643 680 4.499188 CCTCGTAATCTCACGCCTTAATCA 60.499 45.833 0.00 0.00 41.67 2.57
647 684 5.692204 CGTAATCTCACGCCTTAATCATTCT 59.308 40.000 0.00 0.00 34.78 2.40
648 685 6.201044 CGTAATCTCACGCCTTAATCATTCTT 59.799 38.462 0.00 0.00 34.78 2.52
653 690 3.689161 CACGCCTTAATCATTCTTGTCCA 59.311 43.478 0.00 0.00 0.00 4.02
664 701 2.584835 TCTTGTCCATTTCCACCCAG 57.415 50.000 0.00 0.00 0.00 4.45
693 730 1.367471 GCCTTTGGCCTTTCCACAC 59.633 57.895 3.32 0.00 46.55 3.82
695 732 0.675633 CCTTTGGCCTTTCCACACAG 59.324 55.000 3.32 0.00 46.55 3.66
696 733 1.691196 CTTTGGCCTTTCCACACAGA 58.309 50.000 3.32 0.00 46.55 3.41
699 772 3.673599 GCCTTTCCACACAGAGGC 58.326 61.111 0.00 0.00 46.81 4.70
708 781 2.591429 CACAGAGGCGGCAACACA 60.591 61.111 13.08 0.00 0.00 3.72
709 782 2.281070 ACAGAGGCGGCAACACAG 60.281 61.111 13.08 0.00 0.00 3.66
716 789 2.972505 CGGCAACACAGCGAAGGT 60.973 61.111 0.00 0.00 41.48 3.50
739 812 0.390472 GCTAAACTGCTGCTCTCGGT 60.390 55.000 0.00 0.00 0.00 4.69
741 814 0.670546 TAAACTGCTGCTCTCGGTGC 60.671 55.000 0.00 0.00 0.00 5.01
746 819 4.056125 CTGCTCTCGGTGCCGTCA 62.056 66.667 10.60 4.46 40.74 4.35
811 884 1.599606 GACGAGGAGCTGAGCTTCCA 61.600 60.000 19.95 0.00 39.88 3.53
816 889 1.264045 GGAGCTGAGCTTCCACTCCT 61.264 60.000 9.00 0.00 42.99 3.69
844 921 2.223641 GGCACGTAGGATCGAACACATA 60.224 50.000 0.00 0.00 34.70 2.29
845 922 3.043586 GCACGTAGGATCGAACACATAG 58.956 50.000 0.00 0.00 34.70 2.23
862 956 1.158484 TAGTCTCCGCTGATCGTCGG 61.158 60.000 16.56 16.56 46.52 4.79
881 975 1.933853 GGAAATCGTCCATCCGTCTTG 59.066 52.381 0.00 0.00 46.97 3.02
893 987 1.345415 TCCGTCTTGGAGGTTGGTTAC 59.655 52.381 0.00 0.00 43.74 2.50
897 991 1.141254 TCTTGGAGGTTGGTTACGCAA 59.859 47.619 0.00 0.00 0.00 4.85
925 1019 9.261180 TCAAGTGTTATTTGTCTCTCTTTACAG 57.739 33.333 0.00 0.00 0.00 2.74
948 1042 5.227152 GCTATCTAGCTAAGTTTCCTGCTC 58.773 45.833 1.92 0.00 45.62 4.26
950 1044 4.457834 TCTAGCTAAGTTTCCTGCTCAC 57.542 45.455 0.00 0.00 37.02 3.51
966 1062 6.374333 TCCTGCTCACATTTAACATTACCTTC 59.626 38.462 0.00 0.00 0.00 3.46
1164 1260 2.654877 GACGCCGACAGGAGGAAA 59.345 61.111 0.00 0.00 42.02 3.13
1208 1304 4.666253 GGTGGGGCAGCTCAAGCA 62.666 66.667 4.59 0.00 45.16 3.91
1354 1453 0.319297 TCATGAGATCAGCATCCGCG 60.319 55.000 0.00 0.00 45.49 6.46
1423 1522 4.219070 CCACTTTTGGCTTCATCAATCTCA 59.781 41.667 0.00 0.00 35.56 3.27
1424 1523 5.105473 CCACTTTTGGCTTCATCAATCTCAT 60.105 40.000 0.00 0.00 35.56 2.90
1513 1615 1.301479 GACTTTGACCGGTCGGCTT 60.301 57.895 28.70 13.82 39.32 4.35
1548 1650 1.982612 TCGAAGATGACACAAGAGCG 58.017 50.000 0.00 0.00 0.00 5.03
1555 1657 0.176910 TGACACAAGAGCGTTGGTGA 59.823 50.000 5.20 0.00 35.33 4.02
1675 1777 4.755629 AGATCTTCAATGATGAGGCAATCG 59.244 41.667 5.13 0.00 36.78 3.34
1686 1788 2.224523 TGAGGCAATCGAAGGTGAGTTT 60.225 45.455 0.00 0.00 0.00 2.66
1724 1826 2.750166 TGAGCGTCAACCAAAACTTCAA 59.250 40.909 0.00 0.00 0.00 2.69
1800 1902 0.680618 CTGGAAATGCAAAGGCCACA 59.319 50.000 5.01 0.00 40.13 4.17
1874 1976 1.064463 GGATGATGTGTGGGACCATGT 60.064 52.381 0.00 0.00 0.00 3.21
1897 1999 0.038744 ATGGGAGGGTGTGCTCAAAG 59.961 55.000 0.00 0.00 0.00 2.77
1899 2001 0.178990 GGGAGGGTGTGCTCAAAGTT 60.179 55.000 0.00 0.00 0.00 2.66
1902 2004 0.550914 AGGGTGTGCTCAAAGTTCCA 59.449 50.000 0.00 0.00 0.00 3.53
1933 2038 2.659016 CTTCAGGCAGCCGAGTCA 59.341 61.111 5.55 0.00 0.00 3.41
1935 2040 0.392193 CTTCAGGCAGCCGAGTCATT 60.392 55.000 5.55 0.00 0.00 2.57
2015 2120 2.632377 AGTCGACACATTATTGCCTGG 58.368 47.619 19.50 0.00 0.00 4.45
2054 2159 3.466836 TCAAGAAGCAGGTGTGTACTTG 58.533 45.455 0.00 0.00 37.00 3.16
2060 2165 5.934625 AGAAGCAGGTGTGTACTTGATTAAG 59.065 40.000 0.00 0.00 41.70 1.85
2061 2166 4.003648 AGCAGGTGTGTACTTGATTAAGC 58.996 43.478 0.00 0.00 36.08 3.09
2078 2183 7.212976 TGATTAAGCTACTAATCTCTGCCTTG 58.787 38.462 15.76 0.00 38.55 3.61
2082 2187 4.340950 AGCTACTAATCTCTGCCTTGAGTC 59.659 45.833 0.00 0.00 35.68 3.36
2091 2196 6.244552 TCTCTGCCTTGAGTCAATAATCAT 57.755 37.500 5.91 0.00 35.68 2.45
2093 2198 6.541278 TCTCTGCCTTGAGTCAATAATCATTG 59.459 38.462 5.91 0.00 36.93 2.82
2165 3153 6.325286 ACTATTAGCTCTTGGAAGGTAAGAGG 59.675 42.308 16.92 6.67 45.77 3.69
2172 3160 1.621814 TGGAAGGTAAGAGGTTGTCGG 59.378 52.381 0.00 0.00 0.00 4.79
2210 3199 7.711339 GGCTAATATTACTTTGCTAGTGTCAGT 59.289 37.037 4.90 0.00 37.73 3.41
2214 3203 9.601217 AATATTACTTTGCTAGTGTCAGTAAGG 57.399 33.333 10.01 0.00 37.73 2.69
2215 3204 3.665190 ACTTTGCTAGTGTCAGTAAGGC 58.335 45.455 0.00 0.00 35.19 4.35
2216 3205 3.071023 ACTTTGCTAGTGTCAGTAAGGCA 59.929 43.478 0.00 0.00 35.19 4.75
2240 3954 3.928375 GCATGGTGCTAAACAAGGAAATG 59.072 43.478 0.00 0.00 40.96 2.32
2246 3960 5.010213 GGTGCTAAACAAGGAAATGTACCAA 59.990 40.000 0.00 0.00 30.64 3.67
2272 3986 1.733360 CAATTGGGCTTTCCGCATTTG 59.267 47.619 0.00 0.00 39.60 2.32
2292 4006 6.403866 TTTGATTTATGCCAACTTGACACT 57.596 33.333 0.00 0.00 0.00 3.55
2294 4008 5.771469 TGATTTATGCCAACTTGACACTTG 58.229 37.500 0.00 0.00 0.00 3.16
2295 4009 5.301551 TGATTTATGCCAACTTGACACTTGT 59.698 36.000 0.00 0.00 0.00 3.16
2296 4010 5.590530 TTTATGCCAACTTGACACTTGTT 57.409 34.783 0.00 0.00 0.00 2.83
2297 4011 3.715628 ATGCCAACTTGACACTTGTTC 57.284 42.857 0.00 0.00 0.00 3.18
2298 4012 2.441410 TGCCAACTTGACACTTGTTCA 58.559 42.857 0.00 0.00 0.00 3.18
2300 4014 2.682856 GCCAACTTGACACTTGTTCAGA 59.317 45.455 0.00 0.00 0.00 3.27
2301 4015 3.487544 GCCAACTTGACACTTGTTCAGAC 60.488 47.826 0.00 0.00 0.00 3.51
2302 4016 3.689161 CCAACTTGACACTTGTTCAGACA 59.311 43.478 0.00 0.00 0.00 3.41
2303 4017 4.437390 CCAACTTGACACTTGTTCAGACAC 60.437 45.833 0.00 0.00 34.98 3.67
2304 4018 3.937814 ACTTGACACTTGTTCAGACACA 58.062 40.909 0.00 0.00 34.98 3.72
2305 4019 4.517285 ACTTGACACTTGTTCAGACACAT 58.483 39.130 0.00 0.00 34.98 3.21
2398 4123 6.409695 CCAGTGAAGACATGGGTCCTATATTT 60.410 42.308 0.00 0.00 45.48 1.40
2405 4130 6.440965 AGACATGGGTCCTATATTTAGGTAGC 59.559 42.308 8.84 5.94 45.48 3.58
2406 4131 6.088819 ACATGGGTCCTATATTTAGGTAGCA 58.911 40.000 8.84 0.00 44.75 3.49
2412 4137 8.312564 GGGTCCTATATTTAGGTAGCAACTAAG 58.687 40.741 8.84 0.00 44.75 2.18
2428 4153 7.889589 GCAACTAAGTTTTTGCCAATATCTT 57.110 32.000 9.67 0.00 41.95 2.40
2440 4165 6.122850 TGCCAATATCTTGTCTCATTTTCG 57.877 37.500 0.00 0.00 0.00 3.46
2443 4168 7.067372 TGCCAATATCTTGTCTCATTTTCGAAT 59.933 33.333 0.00 0.00 0.00 3.34
2468 4193 9.678260 ATTTACTGATGAAAGATCTAAGTGCTT 57.322 29.630 0.00 0.00 0.00 3.91
2490 4215 6.404844 GCTTAGCTACTCAACAGTGTCATAGA 60.405 42.308 0.00 0.00 33.62 1.98
2548 4274 7.868922 GGTAAAAATAACAATTTCGGTGAACCT 59.131 33.333 0.00 0.00 0.00 3.50
2558 4284 5.353394 TTTCGGTGAACCTCTGCTAATAT 57.647 39.130 0.00 0.00 0.00 1.28
2559 4285 4.322080 TCGGTGAACCTCTGCTAATATG 57.678 45.455 0.00 0.00 0.00 1.78
2567 4293 8.462016 GTGAACCTCTGCTAATATGACAAAATT 58.538 33.333 0.00 0.00 0.00 1.82
2623 4350 6.801539 TGGTTGTAGTTCTGCTAGAAAATG 57.198 37.500 0.00 0.00 35.75 2.32
2628 4355 4.756084 AGTTCTGCTAGAAAATGTGCAC 57.244 40.909 10.75 10.75 35.75 4.57
2629 4356 4.136796 AGTTCTGCTAGAAAATGTGCACA 58.863 39.130 24.08 24.08 35.75 4.57
2690 4428 9.056005 CGATTGAGGGATAAGATAATTTCACAA 57.944 33.333 0.00 0.00 0.00 3.33
2754 4492 7.033791 TCGGCTAAATCTAGAGTACAACTTTG 58.966 38.462 0.00 0.00 0.00 2.77
2788 4555 6.311445 CGATGACAGAGTAGTGCAAAAGTATT 59.689 38.462 0.00 0.00 0.00 1.89
2805 4572 6.934210 AAAGTATTTTCTAGCAATACGCTCG 58.066 36.000 14.32 0.00 41.73 5.03
2806 4573 6.755141 AAAGTATTTTCTAGCAATACGCTCGA 59.245 34.615 14.32 0.00 41.73 4.04
2807 4574 7.043325 AAAGTATTTTCTAGCAATACGCTCGAG 60.043 37.037 8.45 8.45 41.73 4.04
2815 4730 3.850272 GCAATACGCTCGAGTTTGTATG 58.150 45.455 20.28 16.29 37.77 2.39
2851 4870 5.803967 CCGTCAATTCTACCTTGTACTGTAC 59.196 44.000 10.98 10.98 0.00 2.90
2869 4888 0.522180 ACGTTCGCAGGTACTCTCAG 59.478 55.000 0.00 0.00 34.60 3.35
2898 4917 7.960262 AGATAGATGAAGAGCACATCAATACA 58.040 34.615 0.00 0.00 44.29 2.29
2903 4922 6.968131 TGAAGAGCACATCAATACACTAAC 57.032 37.500 0.00 0.00 0.00 2.34
2917 4936 7.659799 TCAATACACTAACGGATATTGGATTGG 59.340 37.037 15.70 3.79 42.01 3.16
2970 4989 4.650972 TGCTGTTAAAGTAATGGGAGGT 57.349 40.909 0.00 0.00 0.00 3.85
3027 5047 2.428530 GGAGCAGGTTTTGGATGATTCC 59.571 50.000 0.00 0.00 42.94 3.01
3081 5101 6.014499 AGCTCAACCACACAGTATACTTAAGT 60.014 38.462 13.68 13.68 0.00 2.24
3360 5383 7.061673 GCTCAGTATATGACTAAAGATGAAGCG 59.938 40.741 0.00 0.00 35.64 4.68
3429 5452 4.456222 TCACAAAAGTTTCTTCGGTTGTCA 59.544 37.500 0.00 0.00 0.00 3.58
3555 5578 4.399303 CCTGGTGATTCATTGGTTACCTTC 59.601 45.833 2.07 0.00 0.00 3.46
3654 5677 6.266558 ACTTGAGGTATCTGGCACTATTAGAG 59.733 42.308 0.00 0.00 0.00 2.43
3658 5684 6.007703 AGGTATCTGGCACTATTAGAGACTC 58.992 44.000 0.00 0.00 34.17 3.36
3834 5860 0.319641 GGTTCCGTGGTCTGACAGAC 60.320 60.000 24.76 24.76 44.32 3.51
3985 6011 2.485479 GCTGCTAATGCTAGGCTTGGTA 60.485 50.000 0.00 0.00 40.48 3.25
4096 6123 3.000727 CTCTGACCGACATGTTTAACCC 58.999 50.000 0.00 0.00 0.00 4.11
4148 6175 1.064685 GTGGTTGGATGGTTAGAGGGG 60.065 57.143 0.00 0.00 0.00 4.79
4225 6252 5.067674 TGGATTTATTTCAGGATTTCTGGCG 59.932 40.000 0.00 0.00 43.53 5.69
4265 6292 3.647113 AGATGATATGCTGGCTCAGTCTT 59.353 43.478 4.45 0.00 33.43 3.01
4267 6294 4.226427 TGATATGCTGGCTCAGTCTTTT 57.774 40.909 4.45 0.00 33.43 2.27
4337 6364 5.746721 GTGAGTGTATGTGCGTATGTATGAA 59.253 40.000 0.00 0.00 0.00 2.57
4402 6430 4.202010 TGCTGGTTGCTTTTGTTTAGAGAC 60.202 41.667 0.00 0.00 43.37 3.36
4498 6527 3.505480 AGACGGATCTAACCTCGGTAT 57.495 47.619 0.00 0.00 31.46 2.73
4662 6691 2.194388 TACCGCCAGAGTCCTCGACT 62.194 60.000 0.00 0.00 46.42 4.18
4756 6785 4.579384 CACGGCCCACCCACAGTT 62.579 66.667 0.00 0.00 0.00 3.16
4757 6786 2.850130 ACGGCCCACCCACAGTTA 60.850 61.111 0.00 0.00 0.00 2.24
4758 6787 2.228480 ACGGCCCACCCACAGTTAT 61.228 57.895 0.00 0.00 0.00 1.89
4759 6788 1.748879 CGGCCCACCCACAGTTATG 60.749 63.158 0.00 0.00 0.00 1.90
4761 6790 0.039035 GGCCCACCCACAGTTATGAA 59.961 55.000 0.00 0.00 0.00 2.57
4774 6814 2.351924 TTATGAATCCCCTGCGCCCC 62.352 60.000 4.18 0.00 0.00 5.80
4909 6949 0.958382 AAAAGTGCGGCCGATAGCAA 60.958 50.000 33.48 2.76 45.61 3.91
4954 6994 4.451900 CCTGGTTAGTCGATTTAATGGCT 58.548 43.478 0.00 0.00 0.00 4.75
4955 6995 4.273480 CCTGGTTAGTCGATTTAATGGCTG 59.727 45.833 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.816995 GGGCATCACAACAAACTAATCAAATAA 59.183 33.333 0.00 0.00 0.00 1.40
8 9 6.165577 GGGCATCACAACAAACTAATCAAAT 58.834 36.000 0.00 0.00 0.00 2.32
10 11 4.320861 CGGGCATCACAACAAACTAATCAA 60.321 41.667 0.00 0.00 0.00 2.57
12 13 3.438781 TCGGGCATCACAACAAACTAATC 59.561 43.478 0.00 0.00 0.00 1.75
13 14 3.417101 TCGGGCATCACAACAAACTAAT 58.583 40.909 0.00 0.00 0.00 1.73
14 15 2.852449 TCGGGCATCACAACAAACTAA 58.148 42.857 0.00 0.00 0.00 2.24
18 19 3.149981 TGTTATCGGGCATCACAACAAA 58.850 40.909 0.00 0.00 0.00 2.83
19 20 2.784347 TGTTATCGGGCATCACAACAA 58.216 42.857 0.00 0.00 0.00 2.83
20 21 2.481289 TGTTATCGGGCATCACAACA 57.519 45.000 0.00 0.00 0.00 3.33
21 22 2.290641 GGATGTTATCGGGCATCACAAC 59.709 50.000 6.82 0.00 42.22 3.32
22 23 2.092699 TGGATGTTATCGGGCATCACAA 60.093 45.455 6.82 0.00 42.22 3.33
23 24 1.488393 TGGATGTTATCGGGCATCACA 59.512 47.619 6.82 0.90 42.22 3.58
24 25 2.146342 CTGGATGTTATCGGGCATCAC 58.854 52.381 6.82 0.00 42.22 3.06
25 26 1.768275 ACTGGATGTTATCGGGCATCA 59.232 47.619 6.82 0.00 42.22 3.07
27 28 1.815408 GCACTGGATGTTATCGGGCAT 60.815 52.381 0.00 0.00 0.00 4.40
28 29 0.463654 GCACTGGATGTTATCGGGCA 60.464 55.000 0.00 0.00 0.00 5.36
29 30 0.463654 TGCACTGGATGTTATCGGGC 60.464 55.000 0.00 0.00 0.00 6.13
30 31 1.875514 CATGCACTGGATGTTATCGGG 59.124 52.381 2.42 0.00 0.00 5.14
31 32 2.545526 GACATGCACTGGATGTTATCGG 59.454 50.000 16.44 0.00 34.10 4.18
32 33 3.197265 TGACATGCACTGGATGTTATCG 58.803 45.455 16.44 0.00 34.10 2.92
33 34 3.003068 GCTGACATGCACTGGATGTTATC 59.997 47.826 16.44 5.71 34.10 1.75
34 35 2.947652 GCTGACATGCACTGGATGTTAT 59.052 45.455 16.44 0.00 34.10 1.89
35 36 2.026915 AGCTGACATGCACTGGATGTTA 60.027 45.455 16.44 11.91 34.10 2.41
36 37 1.171308 GCTGACATGCACTGGATGTT 58.829 50.000 16.44 2.11 34.10 2.71
37 38 0.327259 AGCTGACATGCACTGGATGT 59.673 50.000 15.43 15.43 36.73 3.06
38 39 1.015109 GAGCTGACATGCACTGGATG 58.985 55.000 8.88 8.88 34.99 3.51
39 40 0.616891 TGAGCTGACATGCACTGGAT 59.383 50.000 0.00 0.00 34.99 3.41
40 41 0.397564 TTGAGCTGACATGCACTGGA 59.602 50.000 0.00 0.00 34.99 3.86
41 42 0.803117 CTTGAGCTGACATGCACTGG 59.197 55.000 0.00 0.00 34.99 4.00
42 43 1.463831 GTCTTGAGCTGACATGCACTG 59.536 52.381 0.00 0.00 34.80 3.66
43 44 1.610102 GGTCTTGAGCTGACATGCACT 60.610 52.381 0.00 0.00 36.26 4.40
44 45 0.801251 GGTCTTGAGCTGACATGCAC 59.199 55.000 0.00 0.00 36.26 4.57
45 46 0.321919 GGGTCTTGAGCTGACATGCA 60.322 55.000 0.00 0.00 36.26 3.96
46 47 0.035630 AGGGTCTTGAGCTGACATGC 60.036 55.000 0.00 0.00 36.26 4.06
47 48 1.678123 CCAGGGTCTTGAGCTGACATG 60.678 57.143 0.00 0.00 36.26 3.21
48 49 0.617413 CCAGGGTCTTGAGCTGACAT 59.383 55.000 0.00 0.00 36.26 3.06
49 50 1.483595 CCCAGGGTCTTGAGCTGACA 61.484 60.000 0.00 0.00 36.26 3.58
50 51 1.298014 CCCAGGGTCTTGAGCTGAC 59.702 63.158 0.00 0.00 0.00 3.51
51 52 1.152030 ACCCAGGGTCTTGAGCTGA 60.152 57.895 4.76 0.00 0.00 4.26
52 53 1.002868 CACCCAGGGTCTTGAGCTG 60.003 63.158 8.79 0.00 31.02 4.24
53 54 0.178903 TACACCCAGGGTCTTGAGCT 60.179 55.000 8.79 0.00 31.02 4.09
54 55 0.250513 CTACACCCAGGGTCTTGAGC 59.749 60.000 8.79 0.00 31.02 4.26
55 56 1.550976 GACTACACCCAGGGTCTTGAG 59.449 57.143 8.79 6.11 31.02 3.02
56 57 1.640917 GACTACACCCAGGGTCTTGA 58.359 55.000 8.79 0.00 31.02 3.02
57 58 0.246635 CGACTACACCCAGGGTCTTG 59.753 60.000 8.79 0.00 31.02 3.02
58 59 1.542187 GCGACTACACCCAGGGTCTT 61.542 60.000 8.79 0.44 31.02 3.01
59 60 1.982938 GCGACTACACCCAGGGTCT 60.983 63.158 8.79 0.00 31.02 3.85
60 61 2.577593 GCGACTACACCCAGGGTC 59.422 66.667 8.79 0.00 31.02 4.46
61 62 3.379445 CGCGACTACACCCAGGGT 61.379 66.667 4.76 4.76 35.62 4.34
62 63 4.814294 GCGCGACTACACCCAGGG 62.814 72.222 12.10 2.85 0.00 4.45
63 64 3.371097 ATGCGCGACTACACCCAGG 62.371 63.158 12.10 0.00 0.00 4.45
64 65 2.167219 CATGCGCGACTACACCCAG 61.167 63.158 12.10 0.00 0.00 4.45
65 66 2.125713 CATGCGCGACTACACCCA 60.126 61.111 12.10 0.00 0.00 4.51
66 67 3.564027 GCATGCGCGACTACACCC 61.564 66.667 12.10 0.00 0.00 4.61
67 68 1.705337 ATTGCATGCGCGACTACACC 61.705 55.000 12.10 0.00 42.97 4.16
68 69 0.315382 GATTGCATGCGCGACTACAC 60.315 55.000 12.10 0.00 42.97 2.90
69 70 0.460109 AGATTGCATGCGCGACTACA 60.460 50.000 12.10 0.00 42.97 2.74
70 71 0.042708 CAGATTGCATGCGCGACTAC 60.043 55.000 12.10 0.00 42.97 2.73
71 72 0.460109 ACAGATTGCATGCGCGACTA 60.460 50.000 12.10 0.00 42.97 2.59
72 73 1.300971 AACAGATTGCATGCGCGACT 61.301 50.000 12.10 6.93 42.97 4.18
73 74 1.129879 CAACAGATTGCATGCGCGAC 61.130 55.000 12.10 0.88 42.97 5.19
74 75 1.135108 CAACAGATTGCATGCGCGA 59.865 52.632 12.10 1.55 42.97 5.87
75 76 0.454789 TTCAACAGATTGCATGCGCG 60.455 50.000 14.09 0.00 42.97 6.86
76 77 1.850441 GATTCAACAGATTGCATGCGC 59.150 47.619 14.09 0.00 35.63 6.09
77 78 3.416119 AGATTCAACAGATTGCATGCG 57.584 42.857 14.09 0.00 35.63 4.73
78 79 4.201685 GCAAAGATTCAACAGATTGCATGC 60.202 41.667 11.82 11.82 41.93 4.06
79 80 5.168569 AGCAAAGATTCAACAGATTGCATG 58.831 37.500 10.45 0.00 44.08 4.06
80 81 5.401531 AGCAAAGATTCAACAGATTGCAT 57.598 34.783 10.45 0.00 44.08 3.96
81 82 4.859304 AGCAAAGATTCAACAGATTGCA 57.141 36.364 10.45 0.00 44.08 4.08
82 83 5.118203 GTCAAGCAAAGATTCAACAGATTGC 59.882 40.000 0.00 0.00 42.48 3.56
83 84 5.632347 GGTCAAGCAAAGATTCAACAGATTG 59.368 40.000 0.00 0.00 37.14 2.67
84 85 5.537674 AGGTCAAGCAAAGATTCAACAGATT 59.462 36.000 0.00 0.00 0.00 2.40
85 86 5.048224 CAGGTCAAGCAAAGATTCAACAGAT 60.048 40.000 0.00 0.00 0.00 2.90
86 87 4.276678 CAGGTCAAGCAAAGATTCAACAGA 59.723 41.667 0.00 0.00 0.00 3.41
87 88 4.276678 TCAGGTCAAGCAAAGATTCAACAG 59.723 41.667 0.00 0.00 0.00 3.16
88 89 4.206375 TCAGGTCAAGCAAAGATTCAACA 58.794 39.130 0.00 0.00 0.00 3.33
89 90 4.836125 TCAGGTCAAGCAAAGATTCAAC 57.164 40.909 0.00 0.00 0.00 3.18
90 91 7.541162 CAATATCAGGTCAAGCAAAGATTCAA 58.459 34.615 0.00 0.00 0.00 2.69
91 92 6.405065 GCAATATCAGGTCAAGCAAAGATTCA 60.405 38.462 0.00 0.00 0.00 2.57
92 93 5.975939 GCAATATCAGGTCAAGCAAAGATTC 59.024 40.000 0.00 0.00 0.00 2.52
93 94 5.655532 AGCAATATCAGGTCAAGCAAAGATT 59.344 36.000 0.00 0.00 0.00 2.40
94 95 5.198965 AGCAATATCAGGTCAAGCAAAGAT 58.801 37.500 0.00 0.00 0.00 2.40
95 96 4.592942 AGCAATATCAGGTCAAGCAAAGA 58.407 39.130 0.00 0.00 0.00 2.52
96 97 4.201990 GGAGCAATATCAGGTCAAGCAAAG 60.202 45.833 8.87 0.00 35.30 2.77
97 98 3.696051 GGAGCAATATCAGGTCAAGCAAA 59.304 43.478 8.87 0.00 35.30 3.68
98 99 3.054139 AGGAGCAATATCAGGTCAAGCAA 60.054 43.478 8.87 0.00 35.30 3.91
99 100 2.507058 AGGAGCAATATCAGGTCAAGCA 59.493 45.455 8.87 0.00 35.30 3.91
100 101 2.877168 CAGGAGCAATATCAGGTCAAGC 59.123 50.000 8.87 0.00 35.30 4.01
101 102 2.877168 GCAGGAGCAATATCAGGTCAAG 59.123 50.000 8.87 3.22 41.58 3.02
102 103 2.923121 GCAGGAGCAATATCAGGTCAA 58.077 47.619 8.87 0.00 41.58 3.18
103 104 2.627515 GCAGGAGCAATATCAGGTCA 57.372 50.000 8.87 0.00 41.58 4.02
115 116 0.248784 GAAATCGGCATTGCAGGAGC 60.249 55.000 11.39 0.00 42.57 4.70
116 117 0.028505 CGAAATCGGCATTGCAGGAG 59.971 55.000 11.39 0.00 35.37 3.69
117 118 0.392327 TCGAAATCGGCATTGCAGGA 60.392 50.000 11.39 7.51 40.29 3.86
118 119 0.451383 TTCGAAATCGGCATTGCAGG 59.549 50.000 11.39 1.67 40.29 4.85
119 120 1.131126 AGTTCGAAATCGGCATTGCAG 59.869 47.619 11.39 6.72 40.29 4.41
120 121 1.130373 GAGTTCGAAATCGGCATTGCA 59.870 47.619 10.13 0.00 40.29 4.08
121 122 1.398390 AGAGTTCGAAATCGGCATTGC 59.602 47.619 18.81 0.00 40.29 3.56
122 123 2.416547 ACAGAGTTCGAAATCGGCATTG 59.583 45.455 22.43 15.67 40.29 2.82
123 124 2.699954 ACAGAGTTCGAAATCGGCATT 58.300 42.857 22.43 3.91 40.29 3.56
124 125 2.386661 ACAGAGTTCGAAATCGGCAT 57.613 45.000 22.43 4.59 40.29 4.40
125 126 2.163818 AACAGAGTTCGAAATCGGCA 57.836 45.000 22.43 0.00 40.29 5.69
126 127 4.092968 ACATAAACAGAGTTCGAAATCGGC 59.907 41.667 22.43 0.32 40.29 5.54
127 128 5.779806 ACATAAACAGAGTTCGAAATCGG 57.220 39.130 21.23 21.23 40.29 4.18
128 129 8.570123 GTTTACATAAACAGAGTTCGAAATCG 57.430 34.615 18.81 15.65 43.70 3.34
142 143 6.772078 AGCGCATACTCTTGTTTACATAAAC 58.228 36.000 11.47 7.44 44.32 2.01
143 144 6.978343 AGCGCATACTCTTGTTTACATAAA 57.022 33.333 11.47 0.00 0.00 1.40
144 145 6.592220 TCAAGCGCATACTCTTGTTTACATAA 59.408 34.615 11.47 0.00 39.23 1.90
145 146 6.103330 TCAAGCGCATACTCTTGTTTACATA 58.897 36.000 11.47 0.00 39.23 2.29
146 147 4.935205 TCAAGCGCATACTCTTGTTTACAT 59.065 37.500 11.47 0.00 39.23 2.29
147 148 4.311606 TCAAGCGCATACTCTTGTTTACA 58.688 39.130 11.47 0.00 39.23 2.41
148 149 4.921470 TCAAGCGCATACTCTTGTTTAC 57.079 40.909 11.47 0.00 39.23 2.01
149 150 4.332543 CCATCAAGCGCATACTCTTGTTTA 59.667 41.667 11.47 0.00 39.23 2.01
150 151 3.127548 CCATCAAGCGCATACTCTTGTTT 59.872 43.478 11.47 0.00 39.23 2.83
151 152 2.679837 CCATCAAGCGCATACTCTTGTT 59.320 45.455 11.47 0.00 39.23 2.83
164 165 4.119442 ACAAATTCATGAGCCATCAAGC 57.881 40.909 0.00 0.00 39.39 4.01
215 216 8.373981 TCATGTGAACCAAAAATCCACATAAAT 58.626 29.630 0.00 0.00 43.93 1.40
224 225 4.990426 CCCAACTCATGTGAACCAAAAATC 59.010 41.667 0.94 0.00 0.00 2.17
259 277 9.609346 ACTATAAATGTAACCCAACTGATGTAC 57.391 33.333 0.00 0.00 0.00 2.90
261 279 9.609346 GTACTATAAATGTAACCCAACTGATGT 57.391 33.333 0.00 0.00 0.00 3.06
266 284 9.832445 CTGATGTACTATAAATGTAACCCAACT 57.168 33.333 0.00 0.00 0.00 3.16
286 304 9.265901 GAGCACATACTTCATATAAACTGATGT 57.734 33.333 0.00 0.00 35.77 3.06
287 305 9.264719 TGAGCACATACTTCATATAAACTGATG 57.735 33.333 0.00 0.00 0.00 3.07
288 306 9.836864 TTGAGCACATACTTCATATAAACTGAT 57.163 29.630 0.00 0.00 0.00 2.90
289 307 9.665719 TTTGAGCACATACTTCATATAAACTGA 57.334 29.630 0.00 0.00 0.00 3.41
290 308 9.926751 CTTTGAGCACATACTTCATATAAACTG 57.073 33.333 0.00 0.00 0.00 3.16
291 309 9.672673 ACTTTGAGCACATACTTCATATAAACT 57.327 29.630 0.00 0.00 0.00 2.66
295 313 9.665719 TGAAACTTTGAGCACATACTTCATATA 57.334 29.630 0.00 0.00 0.00 0.86
296 314 8.565896 TGAAACTTTGAGCACATACTTCATAT 57.434 30.769 0.00 0.00 0.00 1.78
297 315 7.661437 ACTGAAACTTTGAGCACATACTTCATA 59.339 33.333 0.00 0.00 0.00 2.15
298 316 6.488006 ACTGAAACTTTGAGCACATACTTCAT 59.512 34.615 0.00 0.00 0.00 2.57
299 317 5.822519 ACTGAAACTTTGAGCACATACTTCA 59.177 36.000 0.00 0.00 0.00 3.02
300 318 6.305693 ACTGAAACTTTGAGCACATACTTC 57.694 37.500 0.00 0.00 0.00 3.01
301 319 6.699575 AACTGAAACTTTGAGCACATACTT 57.300 33.333 0.00 0.00 0.00 2.24
302 320 6.699575 AAACTGAAACTTTGAGCACATACT 57.300 33.333 0.00 0.00 0.00 2.12
303 321 9.463443 AAATAAACTGAAACTTTGAGCACATAC 57.537 29.630 0.00 0.00 0.00 2.39
305 323 8.819974 CAAAATAAACTGAAACTTTGAGCACAT 58.180 29.630 0.00 0.00 0.00 3.21
306 324 7.201513 GCAAAATAAACTGAAACTTTGAGCACA 60.202 33.333 0.00 0.00 0.00 4.57
307 325 7.010460 AGCAAAATAAACTGAAACTTTGAGCAC 59.990 33.333 0.00 0.00 0.00 4.40
308 326 7.041107 AGCAAAATAAACTGAAACTTTGAGCA 58.959 30.769 0.00 0.00 0.00 4.26
309 327 7.468922 AGCAAAATAAACTGAAACTTTGAGC 57.531 32.000 0.00 0.00 0.00 4.26
310 328 8.872845 ACAAGCAAAATAAACTGAAACTTTGAG 58.127 29.630 0.00 0.00 0.00 3.02
311 329 8.770438 ACAAGCAAAATAAACTGAAACTTTGA 57.230 26.923 0.00 0.00 0.00 2.69
312 330 9.264782 CAACAAGCAAAATAAACTGAAACTTTG 57.735 29.630 0.00 0.00 0.00 2.77
325 343 7.144661 CCATGTACAACTCAACAAGCAAAATA 58.855 34.615 0.00 0.00 0.00 1.40
327 345 5.105554 ACCATGTACAACTCAACAAGCAAAA 60.106 36.000 0.00 0.00 0.00 2.44
352 370 1.210204 AAGGAGGGCTGGCAAGATGA 61.210 55.000 2.88 0.00 0.00 2.92
354 372 0.411058 AAAAGGAGGGCTGGCAAGAT 59.589 50.000 2.88 0.00 0.00 2.40
358 376 0.827507 GAACAAAAGGAGGGCTGGCA 60.828 55.000 2.88 0.00 0.00 4.92
381 399 7.496529 TTAACTTTCCATATCTACATGCAGC 57.503 36.000 0.00 0.00 0.00 5.25
420 457 7.175467 TGTCATGTTGCTGATCTTGTTTAATCT 59.825 33.333 0.00 0.00 0.00 2.40
421 458 7.307694 TGTCATGTTGCTGATCTTGTTTAATC 58.692 34.615 0.00 0.00 0.00 1.75
423 460 6.631971 TGTCATGTTGCTGATCTTGTTTAA 57.368 33.333 0.00 0.00 0.00 1.52
488 525 9.146984 CCGTGACTTGTACTTTAATCTTTATGA 57.853 33.333 0.00 0.00 0.00 2.15
490 527 8.316214 TCCCGTGACTTGTACTTTAATCTTTAT 58.684 33.333 0.00 0.00 0.00 1.40
491 528 7.669427 TCCCGTGACTTGTACTTTAATCTTTA 58.331 34.615 0.00 0.00 0.00 1.85
492 529 6.527423 TCCCGTGACTTGTACTTTAATCTTT 58.473 36.000 0.00 0.00 0.00 2.52
493 530 6.105397 TCCCGTGACTTGTACTTTAATCTT 57.895 37.500 0.00 0.00 0.00 2.40
494 531 5.337330 CCTCCCGTGACTTGTACTTTAATCT 60.337 44.000 0.00 0.00 0.00 2.40
495 532 4.868734 CCTCCCGTGACTTGTACTTTAATC 59.131 45.833 0.00 0.00 0.00 1.75
497 534 3.896888 TCCTCCCGTGACTTGTACTTTAA 59.103 43.478 0.00 0.00 0.00 1.52
498 535 3.256631 GTCCTCCCGTGACTTGTACTTTA 59.743 47.826 0.00 0.00 0.00 1.85
499 536 2.036862 GTCCTCCCGTGACTTGTACTTT 59.963 50.000 0.00 0.00 0.00 2.66
500 537 1.617357 GTCCTCCCGTGACTTGTACTT 59.383 52.381 0.00 0.00 0.00 2.24
501 538 1.254954 GTCCTCCCGTGACTTGTACT 58.745 55.000 0.00 0.00 0.00 2.73
502 539 0.245813 GGTCCTCCCGTGACTTGTAC 59.754 60.000 0.00 0.00 33.22 2.90
503 540 2.662309 GGTCCTCCCGTGACTTGTA 58.338 57.895 0.00 0.00 33.22 2.41
504 541 3.468063 GGTCCTCCCGTGACTTGT 58.532 61.111 0.00 0.00 33.22 3.16
513 550 0.323629 TTTGTCATGTCGGTCCTCCC 59.676 55.000 0.00 0.00 0.00 4.30
514 551 2.178912 TTTTGTCATGTCGGTCCTCC 57.821 50.000 0.00 0.00 0.00 4.30
515 552 3.751175 TCAATTTTGTCATGTCGGTCCTC 59.249 43.478 0.00 0.00 0.00 3.71
516 553 3.750371 TCAATTTTGTCATGTCGGTCCT 58.250 40.909 0.00 0.00 0.00 3.85
517 554 4.497473 TTCAATTTTGTCATGTCGGTCC 57.503 40.909 0.00 0.00 0.00 4.46
518 555 6.205784 TCTTTTCAATTTTGTCATGTCGGTC 58.794 36.000 0.00 0.00 0.00 4.79
519 556 6.142818 TCTTTTCAATTTTGTCATGTCGGT 57.857 33.333 0.00 0.00 0.00 4.69
520 557 7.008628 GCTATCTTTTCAATTTTGTCATGTCGG 59.991 37.037 0.00 0.00 0.00 4.79
521 558 7.538334 TGCTATCTTTTCAATTTTGTCATGTCG 59.462 33.333 0.00 0.00 0.00 4.35
522 559 8.746922 TGCTATCTTTTCAATTTTGTCATGTC 57.253 30.769 0.00 0.00 0.00 3.06
523 560 8.579006 TCTGCTATCTTTTCAATTTTGTCATGT 58.421 29.630 0.00 0.00 0.00 3.21
524 561 8.975410 TCTGCTATCTTTTCAATTTTGTCATG 57.025 30.769 0.00 0.00 0.00 3.07
525 562 9.582431 CATCTGCTATCTTTTCAATTTTGTCAT 57.418 29.630 0.00 0.00 0.00 3.06
526 563 8.579006 ACATCTGCTATCTTTTCAATTTTGTCA 58.421 29.630 0.00 0.00 0.00 3.58
527 564 8.976986 ACATCTGCTATCTTTTCAATTTTGTC 57.023 30.769 0.00 0.00 0.00 3.18
544 581 9.494271 ACGTATTATGATGAAATAACATCTGCT 57.506 29.630 0.00 0.00 44.61 4.24
545 582 9.533983 CACGTATTATGATGAAATAACATCTGC 57.466 33.333 0.00 0.00 44.61 4.26
550 587 9.810545 TGAGACACGTATTATGATGAAATAACA 57.189 29.630 0.00 0.00 0.00 2.41
554 591 9.546428 TGAATGAGACACGTATTATGATGAAAT 57.454 29.630 0.00 0.00 0.00 2.17
555 592 8.940768 TGAATGAGACACGTATTATGATGAAA 57.059 30.769 0.00 0.00 0.00 2.69
556 593 8.940768 TTGAATGAGACACGTATTATGATGAA 57.059 30.769 0.00 0.00 0.00 2.57
557 594 8.981647 CATTGAATGAGACACGTATTATGATGA 58.018 33.333 0.00 0.00 0.00 2.92
558 595 7.743400 GCATTGAATGAGACACGTATTATGATG 59.257 37.037 9.76 0.00 0.00 3.07
559 596 7.442062 TGCATTGAATGAGACACGTATTATGAT 59.558 33.333 9.76 0.00 0.00 2.45
560 597 6.760770 TGCATTGAATGAGACACGTATTATGA 59.239 34.615 9.76 0.00 0.00 2.15
561 598 6.947258 TGCATTGAATGAGACACGTATTATG 58.053 36.000 9.76 0.00 0.00 1.90
562 599 6.293081 GCTGCATTGAATGAGACACGTATTAT 60.293 38.462 9.76 0.00 0.00 1.28
563 600 5.006649 GCTGCATTGAATGAGACACGTATTA 59.993 40.000 9.76 0.00 0.00 0.98
564 601 4.201851 GCTGCATTGAATGAGACACGTATT 60.202 41.667 9.76 0.00 0.00 1.89
565 602 3.310774 GCTGCATTGAATGAGACACGTAT 59.689 43.478 9.76 0.00 0.00 3.06
566 603 2.672874 GCTGCATTGAATGAGACACGTA 59.327 45.455 9.76 0.00 0.00 3.57
567 604 1.466167 GCTGCATTGAATGAGACACGT 59.534 47.619 9.76 0.00 0.00 4.49
568 605 1.736126 AGCTGCATTGAATGAGACACG 59.264 47.619 9.76 0.00 0.00 4.49
569 606 2.486982 ACAGCTGCATTGAATGAGACAC 59.513 45.455 15.27 0.00 0.00 3.67
570 607 2.745821 GACAGCTGCATTGAATGAGACA 59.254 45.455 15.27 0.00 0.00 3.41
571 608 3.008330 AGACAGCTGCATTGAATGAGAC 58.992 45.455 15.27 0.00 0.00 3.36
572 609 3.007635 CAGACAGCTGCATTGAATGAGA 58.992 45.455 15.27 0.00 34.95 3.27
573 610 3.406728 CAGACAGCTGCATTGAATGAG 57.593 47.619 15.27 4.97 34.95 2.90
586 623 5.044558 GGAGTAATAACAGTAGCAGACAGC 58.955 45.833 0.00 0.00 46.19 4.40
587 624 6.208988 TGGAGTAATAACAGTAGCAGACAG 57.791 41.667 0.00 0.00 0.00 3.51
588 625 6.791867 ATGGAGTAATAACAGTAGCAGACA 57.208 37.500 0.00 0.00 0.00 3.41
589 626 7.265673 TGAATGGAGTAATAACAGTAGCAGAC 58.734 38.462 0.00 0.00 0.00 3.51
590 627 7.418337 TGAATGGAGTAATAACAGTAGCAGA 57.582 36.000 0.00 0.00 0.00 4.26
591 628 8.554528 CATTGAATGGAGTAATAACAGTAGCAG 58.445 37.037 0.00 0.00 0.00 4.24
592 629 7.012327 GCATTGAATGGAGTAATAACAGTAGCA 59.988 37.037 7.35 0.00 0.00 3.49
593 630 7.355778 GCATTGAATGGAGTAATAACAGTAGC 58.644 38.462 7.35 0.00 0.00 3.58
594 631 7.041098 GGGCATTGAATGGAGTAATAACAGTAG 60.041 40.741 7.35 0.00 0.00 2.57
595 632 6.770785 GGGCATTGAATGGAGTAATAACAGTA 59.229 38.462 7.35 0.00 0.00 2.74
596 633 5.594317 GGGCATTGAATGGAGTAATAACAGT 59.406 40.000 7.35 0.00 0.00 3.55
597 634 5.010012 GGGGCATTGAATGGAGTAATAACAG 59.990 44.000 7.35 0.00 0.00 3.16
598 635 4.892934 GGGGCATTGAATGGAGTAATAACA 59.107 41.667 7.35 0.00 0.00 2.41
599 636 5.140454 AGGGGCATTGAATGGAGTAATAAC 58.860 41.667 7.35 0.00 0.00 1.89
618 655 1.067582 GGCGTGAGATTACGAGGGG 59.932 63.158 0.92 0.00 46.46 4.79
622 659 4.642445 TGATTAAGGCGTGAGATTACGA 57.358 40.909 0.92 0.00 46.46 3.43
625 662 7.047891 ACAAGAATGATTAAGGCGTGAGATTA 58.952 34.615 0.00 0.00 0.00 1.75
627 664 5.431765 ACAAGAATGATTAAGGCGTGAGAT 58.568 37.500 0.00 0.00 0.00 2.75
639 676 4.467438 GGGTGGAAATGGACAAGAATGATT 59.533 41.667 0.00 0.00 0.00 2.57
640 677 4.026052 GGGTGGAAATGGACAAGAATGAT 58.974 43.478 0.00 0.00 0.00 2.45
643 680 3.434309 CTGGGTGGAAATGGACAAGAAT 58.566 45.455 0.00 0.00 0.00 2.40
647 684 0.482446 AGCTGGGTGGAAATGGACAA 59.518 50.000 0.00 0.00 0.00 3.18
648 685 0.251297 CAGCTGGGTGGAAATGGACA 60.251 55.000 5.57 0.00 0.00 4.02
682 719 3.673599 GCCTCTGTGTGGAAAGGC 58.326 61.111 0.00 0.00 46.76 4.35
684 721 2.328099 GCCGCCTCTGTGTGGAAAG 61.328 63.158 0.00 0.00 38.18 2.62
687 724 3.555324 TTGCCGCCTCTGTGTGGA 61.555 61.111 0.00 0.00 38.18 4.02
691 728 2.591429 TGTGTTGCCGCCTCTGTG 60.591 61.111 0.00 0.00 0.00 3.66
693 730 3.730761 GCTGTGTTGCCGCCTCTG 61.731 66.667 0.00 0.00 0.00 3.35
696 733 4.927782 TTCGCTGTGTTGCCGCCT 62.928 61.111 0.00 0.00 0.00 5.52
699 772 2.972505 ACCTTCGCTGTGTTGCCG 60.973 61.111 0.00 0.00 0.00 5.69
708 781 0.977395 AGTTTAGCTCCACCTTCGCT 59.023 50.000 0.00 0.00 37.77 4.93
709 782 1.079503 CAGTTTAGCTCCACCTTCGC 58.920 55.000 0.00 0.00 0.00 4.70
716 789 3.540211 GAGCAGCAGTTTAGCTCCA 57.460 52.632 0.00 0.00 46.82 3.86
748 821 1.077429 GCTTAGCAACCCCTCCAGG 60.077 63.158 0.00 0.00 0.00 4.45
750 823 1.685224 CAGCTTAGCAACCCCTCCA 59.315 57.895 7.07 0.00 0.00 3.86
789 862 3.134792 GCTCAGCTCCTCGTCCGA 61.135 66.667 0.00 0.00 0.00 4.55
794 867 1.153667 GTGGAAGCTCAGCTCCTCG 60.154 63.158 0.00 0.00 38.25 4.63
795 868 0.175531 GAGTGGAAGCTCAGCTCCTC 59.824 60.000 0.00 4.38 38.25 3.71
822 895 1.138036 TGTTCGATCCTACGTGCCG 59.862 57.895 0.00 0.00 34.70 5.69
824 897 1.922570 ATGTGTTCGATCCTACGTGC 58.077 50.000 0.00 0.00 34.70 5.34
831 904 2.859032 GCGGAGACTATGTGTTCGATCC 60.859 54.545 0.00 0.00 0.00 3.36
832 905 2.033550 AGCGGAGACTATGTGTTCGATC 59.966 50.000 0.00 0.00 0.00 3.69
833 906 2.025155 AGCGGAGACTATGTGTTCGAT 58.975 47.619 0.00 0.00 0.00 3.59
836 909 2.941453 TCAGCGGAGACTATGTGTTC 57.059 50.000 0.00 0.00 0.00 3.18
840 917 1.604755 GACGATCAGCGGAGACTATGT 59.395 52.381 0.00 0.00 46.49 2.29
844 921 3.102985 CGACGATCAGCGGAGACT 58.897 61.111 0.00 0.00 46.49 3.24
862 956 1.933853 CCAAGACGGATGGACGATTTC 59.066 52.381 0.00 0.00 40.56 2.17
863 957 1.553248 TCCAAGACGGATGGACGATTT 59.447 47.619 2.37 0.00 41.98 2.17
881 975 2.156098 TGAATTGCGTAACCAACCTCC 58.844 47.619 0.00 0.00 0.00 4.30
893 987 6.373779 AGAGACAAATAACACTTGAATTGCG 58.626 36.000 0.00 0.00 0.00 4.85
925 1019 5.208463 AGCAGGAAACTTAGCTAGATAGC 57.792 43.478 3.58 3.58 44.84 2.97
976 1072 9.316730 CATTGTTGCTGGCTATTTTTATTGTAT 57.683 29.630 0.00 0.00 0.00 2.29
977 1073 7.763528 CCATTGTTGCTGGCTATTTTTATTGTA 59.236 33.333 0.00 0.00 0.00 2.41
978 1074 6.594937 CCATTGTTGCTGGCTATTTTTATTGT 59.405 34.615 0.00 0.00 0.00 2.71
979 1075 7.007313 CCATTGTTGCTGGCTATTTTTATTG 57.993 36.000 0.00 0.00 0.00 1.90
1164 1260 0.037605 GGACGGTCTTGTCGGTGATT 60.038 55.000 8.23 0.00 39.83 2.57
1208 1304 2.430694 TCAGTAGCTTCGTACATGGCAT 59.569 45.455 0.00 0.00 0.00 4.40
1354 1453 1.517242 CTCTGGTTGAGTGCCTTGAC 58.483 55.000 0.00 0.00 37.99 3.18
1459 1561 3.737047 CGACTTGGATTACCATAGTGCGT 60.737 47.826 0.00 0.00 46.34 5.24
1461 1563 3.131396 CCGACTTGGATTACCATAGTGC 58.869 50.000 0.00 0.00 46.34 4.40
1513 1615 2.366640 TCGATTTTGTCCCCAACCAA 57.633 45.000 0.00 0.00 0.00 3.67
1536 1638 0.176910 TCACCAACGCTCTTGTGTCA 59.823 50.000 0.00 0.00 35.64 3.58
1555 1657 2.411583 TCCTGTCTGCATGATATGGGT 58.588 47.619 0.00 0.00 0.00 4.51
1675 1777 7.970614 CCATATCTTTTTGCTAAACTCACCTTC 59.029 37.037 0.00 0.00 0.00 3.46
1686 1788 4.941263 ACGCTCAACCATATCTTTTTGCTA 59.059 37.500 0.00 0.00 0.00 3.49
1724 1826 1.273759 TCTCAGCAGCTCAACCTCAT 58.726 50.000 0.00 0.00 0.00 2.90
1800 1902 0.035458 CCTTGAGGCTTCGGTGAAGT 59.965 55.000 8.23 0.00 41.27 3.01
1874 1976 1.616327 AGCACACCCTCCCATGCTA 60.616 57.895 0.00 0.00 46.36 3.49
1897 1999 3.308438 AGCAGCAACATTGAATGGAAC 57.692 42.857 10.27 0.00 33.60 3.62
1899 2001 2.892215 TGAAGCAGCAACATTGAATGGA 59.108 40.909 10.27 0.00 33.60 3.41
1902 2004 2.353406 GCCTGAAGCAGCAACATTGAAT 60.353 45.455 0.00 0.00 42.97 2.57
1933 2038 3.200825 CCTTCATCCCTAGTGGTGACAAT 59.799 47.826 0.00 0.00 46.06 2.71
1935 2040 2.187958 CCTTCATCCCTAGTGGTGACA 58.812 52.381 0.00 0.00 38.70 3.58
2015 2120 2.362736 TGAGCAATGACCAAGCATCTC 58.637 47.619 0.00 0.00 0.00 2.75
2054 2159 7.437748 TCAAGGCAGAGATTAGTAGCTTAATC 58.562 38.462 9.31 9.31 39.33 1.75
2060 2165 4.098654 TGACTCAAGGCAGAGATTAGTAGC 59.901 45.833 13.01 0.00 38.98 3.58
2061 2166 5.843673 TGACTCAAGGCAGAGATTAGTAG 57.156 43.478 13.01 0.00 38.98 2.57
2147 3135 3.244596 ACAACCTCTTACCTTCCAAGAGC 60.245 47.826 6.58 0.00 45.06 4.09
2165 3153 3.754850 AGCCCTACAAAATTACCGACAAC 59.245 43.478 0.00 0.00 0.00 3.32
2240 3954 1.337728 GCCCAATTGGTGCTTTGGTAC 60.338 52.381 22.91 0.00 40.68 3.34
2246 3960 0.686789 GGAAAGCCCAATTGGTGCTT 59.313 50.000 31.36 31.36 46.41 3.91
2272 3986 5.772521 ACAAGTGTCAAGTTGGCATAAATC 58.227 37.500 14.25 0.00 40.49 2.17
2292 4006 6.767524 ACAAAACCTAATGTGTCTGAACAA 57.232 33.333 0.00 0.00 37.08 2.83
2294 4008 7.378728 GCTAAACAAAACCTAATGTGTCTGAAC 59.621 37.037 0.00 0.00 0.00 3.18
2295 4009 7.422399 GCTAAACAAAACCTAATGTGTCTGAA 58.578 34.615 0.00 0.00 0.00 3.02
2296 4010 6.016610 GGCTAAACAAAACCTAATGTGTCTGA 60.017 38.462 0.00 0.00 0.00 3.27
2297 4011 6.149633 GGCTAAACAAAACCTAATGTGTCTG 58.850 40.000 0.00 0.00 0.00 3.51
2298 4012 5.048991 CGGCTAAACAAAACCTAATGTGTCT 60.049 40.000 0.00 0.00 0.00 3.41
2300 4014 4.822896 TCGGCTAAACAAAACCTAATGTGT 59.177 37.500 0.00 0.00 0.00 3.72
2301 4015 5.365403 TCGGCTAAACAAAACCTAATGTG 57.635 39.130 0.00 0.00 0.00 3.21
2302 4016 4.082949 GCTCGGCTAAACAAAACCTAATGT 60.083 41.667 0.00 0.00 0.00 2.71
2303 4017 4.156008 AGCTCGGCTAAACAAAACCTAATG 59.844 41.667 0.00 0.00 36.99 1.90
2304 4018 4.332828 AGCTCGGCTAAACAAAACCTAAT 58.667 39.130 0.00 0.00 36.99 1.73
2305 4019 3.746940 AGCTCGGCTAAACAAAACCTAA 58.253 40.909 0.00 0.00 36.99 2.69
2358 4081 8.525316 TGTCTTCACTGGTAAAAACGATATAGA 58.475 33.333 0.00 0.00 0.00 1.98
2359 4082 8.697846 TGTCTTCACTGGTAAAAACGATATAG 57.302 34.615 0.00 0.00 0.00 1.31
2361 4084 7.065803 CCATGTCTTCACTGGTAAAAACGATAT 59.934 37.037 0.00 0.00 0.00 1.63
2405 4130 8.816640 ACAAGATATTGGCAAAAACTTAGTTG 57.183 30.769 3.01 3.10 0.00 3.16
2406 4131 8.860088 AGACAAGATATTGGCAAAAACTTAGTT 58.140 29.630 8.95 0.00 30.64 2.24
2412 4137 8.538409 AAATGAGACAAGATATTGGCAAAAAC 57.462 30.769 8.95 0.00 30.64 2.43
2428 4153 8.546597 TCATCAGTAAATTCGAAAATGAGACA 57.453 30.769 0.00 0.00 0.00 3.41
2440 4165 9.928236 GCACTTAGATCTTTCATCAGTAAATTC 57.072 33.333 0.00 0.00 0.00 2.17
2448 4173 6.882656 AGCTAAGCACTTAGATCTTTCATCA 58.117 36.000 19.23 0.00 43.90 3.07
2468 4193 7.646548 ATTCTATGACACTGTTGAGTAGCTA 57.353 36.000 0.00 0.00 0.00 3.32
2524 4250 8.852135 AGAGGTTCACCGAAATTGTTATTTTTA 58.148 29.630 0.00 0.00 42.08 1.52
2590 4316 6.210784 AGCAGAACTACAACCAACATCTAGTA 59.789 38.462 0.00 0.00 0.00 1.82
2608 4335 4.222114 GTGTGCACATTTTCTAGCAGAAC 58.778 43.478 24.69 0.19 37.72 3.01
2611 4338 3.902261 TGTGTGCACATTTTCTAGCAG 57.098 42.857 24.69 0.00 37.72 4.24
2655 4393 5.306937 TCTTATCCCTCAATCGCCTGAAATA 59.693 40.000 0.00 0.00 0.00 1.40
2664 4402 8.607441 TGTGAAATTATCTTATCCCTCAATCG 57.393 34.615 0.00 0.00 0.00 3.34
2731 4469 9.819267 ATACAAAGTTGTACTCTAGATTTAGCC 57.181 33.333 6.05 0.00 45.47 3.93
2754 4492 5.910166 CACTACTCTGTCATCGCTGTTATAC 59.090 44.000 0.00 0.00 0.00 1.47
2795 4562 5.450376 AACATACAAACTCGAGCGTATTG 57.550 39.130 13.61 14.64 0.00 1.90
2798 4565 5.702865 ACTTAACATACAAACTCGAGCGTA 58.297 37.500 13.61 12.08 0.00 4.42
2800 4567 6.807708 ATACTTAACATACAAACTCGAGCG 57.192 37.500 13.61 3.76 0.00 5.03
2801 4568 9.897349 GTAAATACTTAACATACAAACTCGAGC 57.103 33.333 13.61 0.00 0.00 5.03
2803 4570 9.075519 CGGTAAATACTTAACATACAAACTCGA 57.924 33.333 0.00 0.00 0.00 4.04
2804 4571 8.863049 ACGGTAAATACTTAACATACAAACTCG 58.137 33.333 0.00 0.00 0.00 4.18
2806 4573 9.709495 TGACGGTAAATACTTAACATACAAACT 57.291 29.630 0.00 0.00 0.00 2.66
2814 4729 9.369904 GGTAGAATTGACGGTAAATACTTAACA 57.630 33.333 0.00 0.00 0.00 2.41
2815 4730 9.591792 AGGTAGAATTGACGGTAAATACTTAAC 57.408 33.333 0.00 0.00 0.00 2.01
2828 4743 5.510674 CGTACAGTACAAGGTAGAATTGACG 59.489 44.000 11.37 0.00 0.00 4.35
2835 4750 3.120199 GCGAACGTACAGTACAAGGTAGA 60.120 47.826 11.37 0.00 0.00 2.59
2836 4751 3.166657 GCGAACGTACAGTACAAGGTAG 58.833 50.000 11.37 0.00 0.00 3.18
2851 4870 0.179161 CCTGAGAGTACCTGCGAACG 60.179 60.000 0.00 0.00 0.00 3.95
2869 4888 4.662468 TGTGCTCTTCATCTATCTCACC 57.338 45.455 0.00 0.00 0.00 4.02
2898 4917 9.807921 ATAATTTCCAATCCAATATCCGTTAGT 57.192 29.630 0.00 0.00 0.00 2.24
3003 5022 1.358787 TCATCCAAAACCTGCTCCCAT 59.641 47.619 0.00 0.00 0.00 4.00
3027 5047 6.099341 GGGCATTTTAGTTACTGACCATTTG 58.901 40.000 0.00 0.00 36.75 2.32
3037 5057 4.017126 AGCTCTTGGGGCATTTTAGTTAC 58.983 43.478 0.00 0.00 0.00 2.50
3081 5101 8.800370 TCAAATAAGGCGGCATATATTCATAA 57.200 30.769 13.08 0.00 0.00 1.90
3360 5383 0.248296 CTCCGTCTTGAGCTACGAGC 60.248 60.000 8.30 0.00 41.55 5.03
3429 5452 7.495934 CCTGATTGTGATCGGTTAGTTTCTATT 59.504 37.037 0.00 0.00 37.01 1.73
3601 5624 6.623486 TGAGTTGATGCAATGATTTAACCAG 58.377 36.000 0.00 0.00 0.00 4.00
3654 5677 5.221541 CCCAGGGAGTACAGAAATATGAGTC 60.222 48.000 0.00 0.00 0.00 3.36
3658 5684 5.104527 TGTTCCCAGGGAGTACAGAAATATG 60.105 44.000 8.67 0.00 31.21 1.78
3672 5698 0.251742 TCTTGCCAATGTTCCCAGGG 60.252 55.000 0.00 0.00 0.00 4.45
3934 5960 5.188359 AGGCAGCAGATACATTTTCCAATTT 59.812 36.000 0.00 0.00 0.00 1.82
3985 6011 7.865385 GTCTAGTTCGATAAGATGCATCTTCTT 59.135 37.037 38.37 28.25 43.27 2.52
4082 6109 3.305110 GTGCAAAGGGTTAAACATGTCG 58.695 45.455 0.00 0.00 0.00 4.35
4118 6145 2.517959 CATCCAACCACAGAACCACAT 58.482 47.619 0.00 0.00 0.00 3.21
4265 6292 2.551270 ACTCCTATGAGCACCTCCAAA 58.449 47.619 0.00 0.00 42.74 3.28
4267 6294 2.424957 CCTACTCCTATGAGCACCTCCA 60.425 54.545 0.00 0.00 42.74 3.86
4379 6407 8.019448 TTGTCTCTAAACAAAAGCAACCAGCA 62.019 38.462 0.00 0.00 39.97 4.41
4381 6409 5.499139 TGTCTCTAAACAAAAGCAACCAG 57.501 39.130 0.00 0.00 0.00 4.00
4402 6430 0.596082 AAGAAATCCGCCGGTGTTTG 59.404 50.000 15.14 0.00 0.00 2.93
4498 6527 7.870509 AGGATCAAATCTCGAAATTCATTCA 57.129 32.000 0.00 0.00 37.96 2.57
4573 6602 2.365105 AGCTACCGCCAAGGCCTA 60.365 61.111 5.16 0.00 46.52 3.93
4662 6691 1.766496 GGTAGGGTTGCATAGGCTACA 59.234 52.381 15.35 0.00 45.77 2.74
4753 6782 0.179018 GGCGCAGGGGATTCATAACT 60.179 55.000 10.83 0.00 0.00 2.24
4754 6783 1.172812 GGGCGCAGGGGATTCATAAC 61.173 60.000 10.83 0.00 0.00 1.89
4755 6784 1.150536 GGGCGCAGGGGATTCATAA 59.849 57.895 10.83 0.00 0.00 1.90
4756 6785 2.829384 GGGGCGCAGGGGATTCATA 61.829 63.158 10.83 0.00 0.00 2.15
4757 6786 4.209866 GGGGCGCAGGGGATTCAT 62.210 66.667 10.83 0.00 0.00 2.57
4909 6949 1.134560 GATACTGACGGCGTCCTCTTT 59.865 52.381 34.28 16.97 0.00 2.52
4954 6994 1.072331 GGTTCTTGTTCCTCCTCTGCA 59.928 52.381 0.00 0.00 0.00 4.41
4955 6995 1.072331 TGGTTCTTGTTCCTCCTCTGC 59.928 52.381 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.