Multiple sequence alignment - TraesCS7B01G490200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G490200 chr7B 100.000 5537 0 0 1 5537 743709324 743714860 0.000000e+00 10226.0
1 TraesCS7B01G490200 chr7B 94.801 3693 175 6 1 3680 744269191 744272879 0.000000e+00 5740.0
2 TraesCS7B01G490200 chr7B 89.765 3273 255 29 1 3257 744330978 744327770 0.000000e+00 4115.0
3 TraesCS7B01G490200 chr7B 87.514 1850 199 15 1842 3676 744249606 744251438 0.000000e+00 2108.0
4 TraesCS7B01G490200 chr7B 88.566 1618 168 7 2081 3687 744293262 744291651 0.000000e+00 1947.0
5 TraesCS7B01G490200 chr7B 88.289 1631 173 9 2081 3700 743652557 743654180 0.000000e+00 1938.0
6 TraesCS7B01G490200 chr7B 85.693 1335 158 17 1 1313 744239409 744240732 0.000000e+00 1376.0
7 TraesCS7B01G490200 chr7B 83.945 1171 158 21 139 1291 744339396 744338238 0.000000e+00 1094.0
8 TraesCS7B01G490200 chr7B 81.037 1292 204 29 156 1437 645403210 645401950 0.000000e+00 990.0
9 TraesCS7B01G490200 chr7B 90.580 276 23 1 5265 5537 744326968 744326693 4.080000e-96 363.0
10 TraesCS7B01G490200 chr7B 89.892 277 25 1 5264 5537 745198573 745198297 2.450000e-93 353.0
11 TraesCS7B01G490200 chr7B 88.849 278 26 3 5264 5537 744251445 744251721 2.470000e-88 337.0
12 TraesCS7B01G490200 chr7B 90.076 131 12 1 1 131 743999391 743999262 9.540000e-38 169.0
13 TraesCS7B01G490200 chr7B 92.593 54 4 0 3690 3743 672725330 672725383 1.650000e-10 78.7
14 TraesCS7B01G490200 chr3B 88.505 3071 260 33 620 3680 778534317 778537304 0.000000e+00 3629.0
15 TraesCS7B01G490200 chrUn 87.825 2497 206 36 528 2999 330873721 330876144 0.000000e+00 2837.0
16 TraesCS7B01G490200 chrUn 88.389 1378 104 19 1518 2884 409760664 409761996 0.000000e+00 1607.0
17 TraesCS7B01G490200 chrUn 87.915 993 80 11 528 1505 219093787 219092820 0.000000e+00 1133.0
18 TraesCS7B01G490200 chr7A 90.855 1837 151 7 1862 3687 736006745 736004915 0.000000e+00 2446.0
19 TraesCS7B01G490200 chr7A 88.952 1774 149 22 1 1745 736008516 736006761 0.000000e+00 2146.0
20 TraesCS7B01G490200 chr7A 87.985 1831 191 13 1872 3687 735844436 735842620 0.000000e+00 2135.0
21 TraesCS7B01G490200 chr7A 89.193 1610 158 7 2081 3680 735962517 735964120 0.000000e+00 1995.0
22 TraesCS7B01G490200 chr7A 88.010 1618 175 10 2082 3686 735784561 735782950 0.000000e+00 1895.0
23 TraesCS7B01G490200 chr7A 81.803 1852 293 30 1864 3687 671425423 671423588 0.000000e+00 1513.0
24 TraesCS7B01G490200 chr7A 81.071 1289 212 22 156 1437 671427319 671426056 0.000000e+00 1000.0
25 TraesCS7B01G490200 chr7A 92.780 277 17 1 5264 5537 736004919 736004643 1.120000e-106 398.0
26 TraesCS7B01G490200 chr7A 89.925 268 24 1 5272 5536 736000291 736000024 5.310000e-90 342.0
27 TraesCS7B01G490200 chr7A 88.809 277 28 1 5264 5537 736070555 736070279 2.470000e-88 337.0
28 TraesCS7B01G490200 chr7A 87.857 280 31 1 5261 5537 735929539 735929818 5.350000e-85 326.0
29 TraesCS7B01G490200 chr7D 89.533 1691 160 8 2008 3687 632143025 632144709 0.000000e+00 2126.0
30 TraesCS7B01G490200 chr7D 86.922 1881 198 23 1825 3687 632080921 632082771 0.000000e+00 2067.0
31 TraesCS7B01G490200 chr7D 89.239 1617 159 7 2081 3687 632098428 632100039 0.000000e+00 2008.0
32 TraesCS7B01G490200 chr7D 84.315 1868 266 17 1826 3676 621260895 621262752 0.000000e+00 1801.0
33 TraesCS7B01G490200 chr7D 82.035 1848 293 23 1864 3687 579761815 579759983 0.000000e+00 1537.0
34 TraesCS7B01G490200 chr7D 89.953 1075 88 11 156 1214 632033222 632034292 0.000000e+00 1369.0
35 TraesCS7B01G490200 chr7D 83.810 1328 180 16 1 1312 632079523 632080831 0.000000e+00 1229.0
36 TraesCS7B01G490200 chr7D 82.438 1173 178 11 63 1211 555047227 555048395 0.000000e+00 1000.0
37 TraesCS7B01G490200 chr7D 90.357 280 24 1 5261 5537 632144702 632144981 1.130000e-96 364.0
38 TraesCS7B01G490200 chr7D 90.323 279 22 3 5261 5535 632046909 632047186 1.470000e-95 361.0
39 TraesCS7B01G490200 chr7D 96.000 50 2 0 3693 3742 615963556 615963507 1.280000e-11 82.4
40 TraesCS7B01G490200 chr2A 82.754 690 61 25 4017 4688 778018351 778017702 3.750000e-156 562.0
41 TraesCS7B01G490200 chr2A 84.841 409 39 15 4862 5262 778017694 778017301 1.870000e-104 390.0
42 TraesCS7B01G490200 chr2A 91.880 234 15 2 3690 3922 778018771 778018541 1.920000e-84 324.0
43 TraesCS7B01G490200 chr2D 91.667 216 18 0 3690 3905 629000133 629000348 3.240000e-77 300.0
44 TraesCS7B01G490200 chr5D 86.207 116 16 0 4985 5100 539149408 539149293 5.820000e-25 126.0
45 TraesCS7B01G490200 chr5D 96.000 50 2 0 3693 3742 253808579 253808530 1.280000e-11 82.4
46 TraesCS7B01G490200 chr5A 96.226 53 2 0 3690 3742 367369346 367369294 2.750000e-13 87.9
47 TraesCS7B01G490200 chr5A 94.340 53 2 1 3690 3742 48351353 48351302 4.600000e-11 80.5
48 TraesCS7B01G490200 chr5B 94.444 54 3 0 3690 3743 338935444 338935497 3.550000e-12 84.2
49 TraesCS7B01G490200 chr1B 94.340 53 3 0 3690 3742 310923099 310923151 1.280000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G490200 chr7B 743709324 743714860 5536 False 10226.000000 10226 100.000000 1 5537 1 chr7B.!!$F3 5536
1 TraesCS7B01G490200 chr7B 744269191 744272879 3688 False 5740.000000 5740 94.801000 1 3680 1 chr7B.!!$F5 3679
2 TraesCS7B01G490200 chr7B 744326693 744330978 4285 True 2239.000000 4115 90.172500 1 5537 2 chr7B.!!$R6 5536
3 TraesCS7B01G490200 chr7B 744291651 744293262 1611 True 1947.000000 1947 88.566000 2081 3687 1 chr7B.!!$R3 1606
4 TraesCS7B01G490200 chr7B 743652557 743654180 1623 False 1938.000000 1938 88.289000 2081 3700 1 chr7B.!!$F2 1619
5 TraesCS7B01G490200 chr7B 744239409 744240732 1323 False 1376.000000 1376 85.693000 1 1313 1 chr7B.!!$F4 1312
6 TraesCS7B01G490200 chr7B 744249606 744251721 2115 False 1222.500000 2108 88.181500 1842 5537 2 chr7B.!!$F6 3695
7 TraesCS7B01G490200 chr7B 744338238 744339396 1158 True 1094.000000 1094 83.945000 139 1291 1 chr7B.!!$R4 1152
8 TraesCS7B01G490200 chr7B 645401950 645403210 1260 True 990.000000 990 81.037000 156 1437 1 chr7B.!!$R1 1281
9 TraesCS7B01G490200 chr3B 778534317 778537304 2987 False 3629.000000 3629 88.505000 620 3680 1 chr3B.!!$F1 3060
10 TraesCS7B01G490200 chrUn 330873721 330876144 2423 False 2837.000000 2837 87.825000 528 2999 1 chrUn.!!$F1 2471
11 TraesCS7B01G490200 chrUn 409760664 409761996 1332 False 1607.000000 1607 88.389000 1518 2884 1 chrUn.!!$F2 1366
12 TraesCS7B01G490200 chrUn 219092820 219093787 967 True 1133.000000 1133 87.915000 528 1505 1 chrUn.!!$R1 977
13 TraesCS7B01G490200 chr7A 735842620 735844436 1816 True 2135.000000 2135 87.985000 1872 3687 1 chr7A.!!$R2 1815
14 TraesCS7B01G490200 chr7A 735962517 735964120 1603 False 1995.000000 1995 89.193000 2081 3680 1 chr7A.!!$F2 1599
15 TraesCS7B01G490200 chr7A 735782950 735784561 1611 True 1895.000000 1895 88.010000 2082 3686 1 chr7A.!!$R1 1604
16 TraesCS7B01G490200 chr7A 736004643 736008516 3873 True 1663.333333 2446 90.862333 1 5537 3 chr7A.!!$R6 5536
17 TraesCS7B01G490200 chr7A 671423588 671427319 3731 True 1256.500000 1513 81.437000 156 3687 2 chr7A.!!$R5 3531
18 TraesCS7B01G490200 chr7D 632098428 632100039 1611 False 2008.000000 2008 89.239000 2081 3687 1 chr7D.!!$F5 1606
19 TraesCS7B01G490200 chr7D 621260895 621262752 1857 False 1801.000000 1801 84.315000 1826 3676 1 chr7D.!!$F2 1850
20 TraesCS7B01G490200 chr7D 632079523 632082771 3248 False 1648.000000 2067 85.366000 1 3687 2 chr7D.!!$F6 3686
21 TraesCS7B01G490200 chr7D 579759983 579761815 1832 True 1537.000000 1537 82.035000 1864 3687 1 chr7D.!!$R1 1823
22 TraesCS7B01G490200 chr7D 632033222 632034292 1070 False 1369.000000 1369 89.953000 156 1214 1 chr7D.!!$F3 1058
23 TraesCS7B01G490200 chr7D 632143025 632144981 1956 False 1245.000000 2126 89.945000 2008 5537 2 chr7D.!!$F7 3529
24 TraesCS7B01G490200 chr7D 555047227 555048395 1168 False 1000.000000 1000 82.438000 63 1211 1 chr7D.!!$F1 1148
25 TraesCS7B01G490200 chr2A 778017301 778018771 1470 True 425.333333 562 86.491667 3690 5262 3 chr2A.!!$R1 1572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
486 499 0.615331 TCTTCTGCTTGCGGAATCCT 59.385 50.000 16.01 0.0 0.00 3.24 F
795 844 4.021925 GGCAAGACCACCCTCGCT 62.022 66.667 0.00 0.0 38.86 4.93 F
2393 2896 5.629079 AACTTTACTATGGCTCAAGTTGC 57.371 39.130 0.00 0.0 36.54 4.17 F
3681 4200 0.598065 CCCCGTTTGGAGAAGCTTTG 59.402 55.000 0.00 0.0 37.49 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2393 2896 4.264253 TCCTTCACTAATCCACATTGCAG 58.736 43.478 0.00 0.0 0.00 4.41 R
2745 3261 2.301346 GTAGCCAATGAATCACCAGGG 58.699 52.381 0.00 0.0 0.00 4.45 R
3755 4274 0.824759 GCCTGTACTCCCGATGAAGT 59.175 55.000 0.00 0.0 0.00 3.01 R
4709 5336 0.176910 TTGTCGTGACAACAGGCAGA 59.823 50.000 11.21 0.0 45.42 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
303 316 2.028385 GGACCTTAAGAACTTCCTCGCA 60.028 50.000 3.36 0.00 0.00 5.10
408 421 2.183811 CTCGACCTCTGCCAGCTG 59.816 66.667 6.78 6.78 0.00 4.24
411 424 1.004560 CGACCTCTGCCAGCTGAAA 60.005 57.895 17.39 1.14 0.00 2.69
475 488 2.125773 CAATCCCTTGCTCTTCTGCT 57.874 50.000 0.00 0.00 0.00 4.24
486 499 0.615331 TCTTCTGCTTGCGGAATCCT 59.385 50.000 16.01 0.00 0.00 3.24
795 844 4.021925 GGCAAGACCACCCTCGCT 62.022 66.667 0.00 0.00 38.86 4.93
2393 2896 5.629079 AACTTTACTATGGCTCAAGTTGC 57.371 39.130 0.00 0.00 36.54 4.17
2496 2999 7.363031 AGTTGGTATCTAGGAACCTGATAGAA 58.637 38.462 13.50 3.44 36.67 2.10
2745 3261 8.948631 TCTCAACTATCCACATTAAGATCAAC 57.051 34.615 0.00 0.00 0.00 3.18
2789 3305 3.386768 TTCTAGTTTGCGAACTCTGCT 57.613 42.857 22.76 1.59 44.75 4.24
2801 3317 3.806521 CGAACTCTGCTTATGGAATCTGG 59.193 47.826 0.00 0.00 0.00 3.86
2945 3461 3.313012 TGACCTTCGTGGATGTACAAG 57.687 47.619 0.00 0.00 39.71 3.16
2950 3466 4.253685 CCTTCGTGGATGTACAAGATTGT 58.746 43.478 0.00 3.37 40.82 2.71
2968 3484 6.897986 AGATTGTTGAATCTTCCTGATAGCT 58.102 36.000 0.00 0.00 45.14 3.32
3230 3746 4.324099 GCATCTTATCATGCTATCCCTGGT 60.324 45.833 0.00 0.00 45.03 4.00
3231 3747 5.426504 CATCTTATCATGCTATCCCTGGTC 58.573 45.833 0.00 0.00 0.00 4.02
3232 3748 3.511540 TCTTATCATGCTATCCCTGGTCG 59.488 47.826 0.00 0.00 0.00 4.79
3233 3749 2.015456 ATCATGCTATCCCTGGTCGA 57.985 50.000 0.00 0.00 0.00 4.20
3290 3806 5.244178 GTCAAAGAGAAGGAAGGTGTCTCTA 59.756 44.000 3.02 0.00 45.80 2.43
3324 3840 4.222114 CAACGAATTGAGAAGGTTCTTGC 58.778 43.478 0.00 0.00 38.15 4.01
3435 3951 1.620822 GTGCCCCTCAACAACTTGAT 58.379 50.000 0.00 0.00 35.78 2.57
3483 3999 2.064434 TGCACACAACTTCCCAATGA 57.936 45.000 0.00 0.00 0.00 2.57
3680 4199 1.179174 GCCCCGTTTGGAGAAGCTTT 61.179 55.000 0.00 0.00 37.49 3.51
3681 4200 0.598065 CCCCGTTTGGAGAAGCTTTG 59.402 55.000 0.00 0.00 37.49 2.77
3778 4297 2.125961 ATCGGGAGTACAGGCCGTC 61.126 63.158 0.00 0.00 0.00 4.79
3794 4313 0.469917 CGTCTGCCCCCACTTGATAT 59.530 55.000 0.00 0.00 0.00 1.63
3800 4319 2.038426 TGCCCCCACTTGATATCATACG 59.962 50.000 6.17 1.18 0.00 3.06
3829 4348 2.234908 CACTAGGCCTAGCTTCAAGTGT 59.765 50.000 35.21 14.03 36.66 3.55
3835 4354 4.702131 AGGCCTAGCTTCAAGTGTATTTTG 59.298 41.667 1.29 0.00 0.00 2.44
3850 4369 7.172342 AGTGTATTTTGAAAGCCCATGTAGTA 58.828 34.615 0.00 0.00 0.00 1.82
3867 4386 2.398588 AGTATAGCTAGCAGCCCACAA 58.601 47.619 18.83 0.00 43.77 3.33
3883 4402 7.354257 CAGCCCACAAAAATAAAGAATTGTTG 58.646 34.615 0.00 0.19 45.06 3.33
3903 4422 3.254014 CTTGCTGCCCCGACGTTTG 62.254 63.158 0.00 0.00 0.00 2.93
3906 4425 3.055719 CTGCCCCGACGTTTGCAT 61.056 61.111 0.00 0.00 32.53 3.96
3934 4483 2.106074 TTTGCCTCATAGCGTGCCG 61.106 57.895 0.00 0.00 34.65 5.69
3960 4546 2.270434 AGGGATTTCCTGACCTAGCA 57.730 50.000 0.00 0.00 46.07 3.49
3961 4547 2.122768 AGGGATTTCCTGACCTAGCAG 58.877 52.381 0.00 0.00 46.07 4.24
3962 4548 1.475930 GGGATTTCCTGACCTAGCAGC 60.476 57.143 0.00 0.00 34.56 5.25
3964 4550 2.484594 GGATTTCCTGACCTAGCAGCTC 60.485 54.545 0.00 0.00 34.56 4.09
3965 4551 1.944177 TTTCCTGACCTAGCAGCTCT 58.056 50.000 0.00 0.00 34.56 4.09
3966 4552 2.828661 TTCCTGACCTAGCAGCTCTA 57.171 50.000 0.00 0.00 34.56 2.43
3988 4574 3.941657 GAGCCGCCGCAAACTCTCT 62.942 63.158 0.00 0.00 37.52 3.10
3990 4576 2.048222 CCGCCGCAAACTCTCTCA 60.048 61.111 0.00 0.00 0.00 3.27
3991 4577 1.667830 CCGCCGCAAACTCTCTCAA 60.668 57.895 0.00 0.00 0.00 3.02
3996 4582 1.221466 CGCAAACTCTCTCAACCGCA 61.221 55.000 0.00 0.00 0.00 5.69
3999 4585 0.600255 AAACTCTCTCAACCGCACCG 60.600 55.000 0.00 0.00 0.00 4.94
4021 4633 1.429423 GCAATCGCCTGCCTACAAC 59.571 57.895 0.00 0.00 36.25 3.32
4028 4640 2.048597 CTGCCTACAACGACGCCA 60.049 61.111 0.00 0.00 0.00 5.69
4071 4683 4.695606 ACCTCAATTCTACAGTCCCCTAA 58.304 43.478 0.00 0.00 0.00 2.69
4072 4684 5.289510 ACCTCAATTCTACAGTCCCCTAAT 58.710 41.667 0.00 0.00 0.00 1.73
4076 4688 7.290248 CCTCAATTCTACAGTCCCCTAATTCTA 59.710 40.741 0.00 0.00 0.00 2.10
4083 4695 9.725206 TCTACAGTCCCCTAATTCTAATTAACT 57.275 33.333 0.00 0.00 31.03 2.24
4105 4717 6.485171 ACTTCAAGGTAAATAGGAATGCAGT 58.515 36.000 0.00 0.00 0.00 4.40
4114 4726 9.726438 GGTAAATAGGAATGCAGTACAATCTAT 57.274 33.333 0.00 0.00 0.00 1.98
4125 4737 9.762933 ATGCAGTACAATCTATGTTTTGTTTTT 57.237 25.926 0.00 0.00 43.63 1.94
4181 4793 5.845985 TCTGTTCGTCTGCAATTTCTAAG 57.154 39.130 0.00 0.00 0.00 2.18
4272 4884 5.591643 TGTTCGTCTGCAATTTCTAAGTC 57.408 39.130 0.00 0.00 0.00 3.01
4275 4887 6.204688 TGTTCGTCTGCAATTTCTAAGTCAAT 59.795 34.615 0.00 0.00 0.00 2.57
4280 4892 7.251281 GTCTGCAATTTCTAAGTCAATAACCC 58.749 38.462 0.00 0.00 0.00 4.11
4304 4916 9.868277 CCCTATTACTCTCAATATCTCATGAAC 57.132 37.037 0.00 0.00 0.00 3.18
4356 4968 9.740710 ATTATAGGCTAGTTCAAACTTCAAACT 57.259 29.630 0.00 0.00 40.37 2.66
4357 4969 9.569122 TTATAGGCTAGTTCAAACTTCAAACTT 57.431 29.630 0.00 0.00 40.37 2.66
4401 5013 8.885494 TTTTAGTATGCAACTTTGAATTTGCT 57.115 26.923 16.35 7.66 46.83 3.91
4403 5015 9.973450 TTTAGTATGCAACTTTGAATTTGCTAA 57.027 25.926 16.35 7.04 46.83 3.09
4404 5016 9.973450 TTAGTATGCAACTTTGAATTTGCTAAA 57.027 25.926 16.35 1.60 46.83 1.85
4448 5060 3.955471 TGACAGACTCCAATCCAATTCC 58.045 45.455 0.00 0.00 0.00 3.01
4520 5139 2.168313 AGGTTTCAGTTTTGGGCACTTG 59.832 45.455 0.00 0.00 0.00 3.16
4538 5158 3.698040 ACTTGATTGCAGGGAAGCTAATG 59.302 43.478 0.00 0.00 34.99 1.90
4539 5159 2.658285 TGATTGCAGGGAAGCTAATGG 58.342 47.619 0.00 0.00 34.99 3.16
4542 5162 1.289160 TGCAGGGAAGCTAATGGAGT 58.711 50.000 0.00 0.00 34.99 3.85
4591 5218 9.662947 AAGATACTACAAGGTAATGTAACCAAC 57.337 33.333 0.00 0.00 42.40 3.77
4594 5221 6.704310 ACTACAAGGTAATGTAACCAACGAT 58.296 36.000 0.00 0.00 42.40 3.73
4604 5231 7.982761 AATGTAACCAACGATACAAGGTTTA 57.017 32.000 0.00 0.00 41.33 2.01
4629 5256 8.579850 ACTAGCTTGAAAATTATTGGTGATCA 57.420 30.769 1.04 0.00 0.00 2.92
4650 5277 4.716784 TCAGGCTGAACTAATGGTGACTAT 59.283 41.667 16.28 0.00 0.00 2.12
4662 5289 9.765795 ACTAATGGTGACTATAAAGAAGCATAC 57.234 33.333 0.00 0.00 33.64 2.39
4684 5311 4.099266 ACTTCTGATGCATCCTGTAGTCTC 59.901 45.833 23.67 0.00 0.00 3.36
4688 5315 2.532250 TGCATCCTGTAGTCTCTGGA 57.468 50.000 0.00 0.00 39.18 3.86
4689 5316 2.103373 TGCATCCTGTAGTCTCTGGAC 58.897 52.381 0.00 0.00 42.41 4.02
4702 5329 4.616953 GTCTCTGGACTTATCAAGCTAGC 58.383 47.826 6.62 6.62 39.24 3.42
4703 5330 4.098654 GTCTCTGGACTTATCAAGCTAGCA 59.901 45.833 18.83 0.00 39.24 3.49
4705 5332 4.026744 TCTGGACTTATCAAGCTAGCACT 58.973 43.478 18.83 0.00 0.00 4.40
4706 5333 5.201243 TCTGGACTTATCAAGCTAGCACTA 58.799 41.667 18.83 0.96 0.00 2.74
4707 5334 5.656859 TCTGGACTTATCAAGCTAGCACTAA 59.343 40.000 18.83 7.67 0.00 2.24
4708 5335 5.661458 TGGACTTATCAAGCTAGCACTAAC 58.339 41.667 18.83 0.00 0.00 2.34
4709 5336 5.422331 TGGACTTATCAAGCTAGCACTAACT 59.578 40.000 18.83 0.00 0.00 2.24
4710 5337 5.980715 GGACTTATCAAGCTAGCACTAACTC 59.019 44.000 18.83 6.99 0.00 3.01
4711 5338 6.183360 GGACTTATCAAGCTAGCACTAACTCT 60.183 42.308 18.83 0.00 0.00 3.24
4712 5339 6.568869 ACTTATCAAGCTAGCACTAACTCTG 58.431 40.000 18.83 1.80 0.00 3.35
4713 5340 3.238108 TCAAGCTAGCACTAACTCTGC 57.762 47.619 18.83 0.00 34.63 4.26
4714 5341 2.093973 TCAAGCTAGCACTAACTCTGCC 60.094 50.000 18.83 0.00 35.01 4.85
4715 5342 1.859302 AGCTAGCACTAACTCTGCCT 58.141 50.000 18.83 0.00 35.01 4.75
4716 5343 1.480137 AGCTAGCACTAACTCTGCCTG 59.520 52.381 18.83 0.00 35.01 4.85
4717 5344 1.205893 GCTAGCACTAACTCTGCCTGT 59.794 52.381 10.63 0.00 35.01 4.00
4718 5345 2.354203 GCTAGCACTAACTCTGCCTGTT 60.354 50.000 10.63 0.00 35.01 3.16
4719 5346 2.175878 AGCACTAACTCTGCCTGTTG 57.824 50.000 0.00 0.00 35.01 3.33
4720 5347 1.417890 AGCACTAACTCTGCCTGTTGT 59.582 47.619 0.00 0.00 35.01 3.32
4721 5348 1.801178 GCACTAACTCTGCCTGTTGTC 59.199 52.381 0.00 0.00 0.00 3.18
4722 5349 2.806745 GCACTAACTCTGCCTGTTGTCA 60.807 50.000 0.00 0.00 0.00 3.58
4723 5350 2.802816 CACTAACTCTGCCTGTTGTCAC 59.197 50.000 0.00 0.00 0.00 3.67
4724 5351 2.061773 CTAACTCTGCCTGTTGTCACG 58.938 52.381 0.00 0.00 0.00 4.35
4725 5352 0.464036 AACTCTGCCTGTTGTCACGA 59.536 50.000 0.00 0.00 0.00 4.35
4726 5353 0.249489 ACTCTGCCTGTTGTCACGAC 60.249 55.000 0.00 0.00 0.00 4.34
4727 5354 0.249447 CTCTGCCTGTTGTCACGACA 60.249 55.000 0.00 0.00 39.98 4.35
4744 5371 4.824848 CGACAATCCTTGACGTTAAGAG 57.175 45.455 20.63 11.08 42.29 2.85
4745 5372 3.612860 CGACAATCCTTGACGTTAAGAGG 59.387 47.826 20.63 6.69 42.29 3.69
4746 5373 4.566987 GACAATCCTTGACGTTAAGAGGT 58.433 43.478 20.63 12.23 0.00 3.85
4747 5374 4.315803 ACAATCCTTGACGTTAAGAGGTG 58.684 43.478 20.63 15.64 0.00 4.00
4748 5375 2.450609 TCCTTGACGTTAAGAGGTGC 57.549 50.000 20.63 0.00 0.00 5.01
4749 5376 1.968493 TCCTTGACGTTAAGAGGTGCT 59.032 47.619 20.63 0.00 0.00 4.40
4750 5377 2.367567 TCCTTGACGTTAAGAGGTGCTT 59.632 45.455 20.63 0.00 40.68 3.91
4751 5378 2.737252 CCTTGACGTTAAGAGGTGCTTC 59.263 50.000 20.63 0.00 38.05 3.86
4752 5379 3.555168 CCTTGACGTTAAGAGGTGCTTCT 60.555 47.826 20.63 0.00 38.05 2.85
4753 5380 3.299340 TGACGTTAAGAGGTGCTTCTC 57.701 47.619 0.00 0.00 38.05 2.87
4754 5381 2.626266 TGACGTTAAGAGGTGCTTCTCA 59.374 45.455 9.01 0.00 38.05 3.27
4755 5382 3.246619 GACGTTAAGAGGTGCTTCTCAG 58.753 50.000 9.01 0.00 38.05 3.35
4769 5396 5.406767 GCTTCTCAGCTATCAAGATTGTG 57.593 43.478 0.00 0.00 43.51 3.33
4770 5397 5.114780 GCTTCTCAGCTATCAAGATTGTGA 58.885 41.667 0.00 0.00 43.51 3.58
4771 5398 5.583854 GCTTCTCAGCTATCAAGATTGTGAA 59.416 40.000 0.00 0.00 43.51 3.18
4772 5399 6.238157 GCTTCTCAGCTATCAAGATTGTGAAG 60.238 42.308 14.58 14.58 43.51 3.02
4773 5400 5.668471 TCTCAGCTATCAAGATTGTGAAGG 58.332 41.667 0.00 0.00 0.00 3.46
4774 5401 5.423290 TCTCAGCTATCAAGATTGTGAAGGA 59.577 40.000 0.00 0.00 0.00 3.36
4775 5402 5.668471 TCAGCTATCAAGATTGTGAAGGAG 58.332 41.667 0.00 0.00 0.00 3.69
4776 5403 5.188555 TCAGCTATCAAGATTGTGAAGGAGT 59.811 40.000 0.00 0.00 0.00 3.85
4777 5404 5.293814 CAGCTATCAAGATTGTGAAGGAGTG 59.706 44.000 0.00 0.00 0.00 3.51
4778 5405 5.188555 AGCTATCAAGATTGTGAAGGAGTGA 59.811 40.000 0.00 0.00 0.00 3.41
4779 5406 6.054295 GCTATCAAGATTGTGAAGGAGTGAT 58.946 40.000 0.00 0.00 0.00 3.06
4780 5407 6.018098 GCTATCAAGATTGTGAAGGAGTGATG 60.018 42.308 0.00 0.00 0.00 3.07
4781 5408 5.488262 TCAAGATTGTGAAGGAGTGATGA 57.512 39.130 0.00 0.00 0.00 2.92
4782 5409 6.058553 TCAAGATTGTGAAGGAGTGATGAT 57.941 37.500 0.00 0.00 0.00 2.45
4783 5410 6.479006 TCAAGATTGTGAAGGAGTGATGATT 58.521 36.000 0.00 0.00 0.00 2.57
4784 5411 6.944290 TCAAGATTGTGAAGGAGTGATGATTT 59.056 34.615 0.00 0.00 0.00 2.17
4785 5412 7.449395 TCAAGATTGTGAAGGAGTGATGATTTT 59.551 33.333 0.00 0.00 0.00 1.82
4786 5413 8.733458 CAAGATTGTGAAGGAGTGATGATTTTA 58.267 33.333 0.00 0.00 0.00 1.52
4787 5414 9.471702 AAGATTGTGAAGGAGTGATGATTTTAT 57.528 29.630 0.00 0.00 0.00 1.40
4788 5415 8.900781 AGATTGTGAAGGAGTGATGATTTTATG 58.099 33.333 0.00 0.00 0.00 1.90
4789 5416 8.812513 ATTGTGAAGGAGTGATGATTTTATGA 57.187 30.769 0.00 0.00 0.00 2.15
4790 5417 8.634335 TTGTGAAGGAGTGATGATTTTATGAA 57.366 30.769 0.00 0.00 0.00 2.57
4791 5418 8.812513 TGTGAAGGAGTGATGATTTTATGAAT 57.187 30.769 0.00 0.00 0.00 2.57
4792 5419 8.680001 TGTGAAGGAGTGATGATTTTATGAATG 58.320 33.333 0.00 0.00 0.00 2.67
4793 5420 8.896744 GTGAAGGAGTGATGATTTTATGAATGA 58.103 33.333 0.00 0.00 0.00 2.57
4794 5421 8.896744 TGAAGGAGTGATGATTTTATGAATGAC 58.103 33.333 0.00 0.00 0.00 3.06
4795 5422 9.118300 GAAGGAGTGATGATTTTATGAATGACT 57.882 33.333 0.00 0.00 0.00 3.41
4796 5423 9.471702 AAGGAGTGATGATTTTATGAATGACTT 57.528 29.630 0.00 0.00 0.00 3.01
4797 5424 9.471702 AGGAGTGATGATTTTATGAATGACTTT 57.528 29.630 0.00 0.00 0.00 2.66
4798 5425 9.512435 GGAGTGATGATTTTATGAATGACTTTG 57.488 33.333 0.00 0.00 0.00 2.77
4819 5446 9.921637 ACTTTGTAGAAAAAGATTTGTTGAACA 57.078 25.926 0.00 0.00 39.12 3.18
4835 5462 9.883142 TTTGTTGAACAAAATTCCTAATGAAGT 57.117 25.926 20.01 0.00 44.23 3.01
4836 5463 8.870160 TGTTGAACAAAATTCCTAATGAAGTG 57.130 30.769 0.00 0.00 36.14 3.16
4837 5464 7.437862 TGTTGAACAAAATTCCTAATGAAGTGC 59.562 33.333 0.00 0.00 36.14 4.40
4838 5465 7.288810 TGAACAAAATTCCTAATGAAGTGCT 57.711 32.000 0.00 0.00 36.14 4.40
4839 5466 8.402798 TGAACAAAATTCCTAATGAAGTGCTA 57.597 30.769 0.00 0.00 36.14 3.49
4840 5467 8.514594 TGAACAAAATTCCTAATGAAGTGCTAG 58.485 33.333 0.00 0.00 36.14 3.42
4841 5468 8.409358 AACAAAATTCCTAATGAAGTGCTAGT 57.591 30.769 0.00 0.00 36.14 2.57
4842 5469 8.409358 ACAAAATTCCTAATGAAGTGCTAGTT 57.591 30.769 0.00 0.00 36.14 2.24
4843 5470 9.515226 ACAAAATTCCTAATGAAGTGCTAGTTA 57.485 29.630 0.00 0.00 36.14 2.24
4847 5474 7.591006 TTCCTAATGAAGTGCTAGTTAAACG 57.409 36.000 0.00 0.00 0.00 3.60
4848 5475 6.694447 TCCTAATGAAGTGCTAGTTAAACGT 58.306 36.000 0.00 0.00 0.00 3.99
4849 5476 7.156673 TCCTAATGAAGTGCTAGTTAAACGTT 58.843 34.615 0.00 0.00 0.00 3.99
4850 5477 7.658575 TCCTAATGAAGTGCTAGTTAAACGTTT 59.341 33.333 18.90 18.90 0.00 3.60
4851 5478 8.287503 CCTAATGAAGTGCTAGTTAAACGTTTT 58.712 33.333 20.19 3.70 0.00 2.43
4852 5479 9.314501 CTAATGAAGTGCTAGTTAAACGTTTTC 57.685 33.333 20.19 12.66 0.00 2.29
4853 5480 6.665474 TGAAGTGCTAGTTAAACGTTTTCA 57.335 33.333 20.19 9.56 0.00 2.69
4854 5481 6.480285 TGAAGTGCTAGTTAAACGTTTTCAC 58.520 36.000 20.19 15.76 0.00 3.18
4868 5495 2.816012 TCACGCGGTGAAAGACCA 59.184 55.556 12.47 0.00 46.55 4.02
4874 5501 1.926511 GCGGTGAAAGACCATGGCAG 61.927 60.000 13.04 0.00 46.55 4.85
4890 5517 2.817258 TGGCAGGAAACGAAAGGTAATG 59.183 45.455 0.00 0.00 0.00 1.90
4892 5519 2.227865 GCAGGAAACGAAAGGTAATGCA 59.772 45.455 0.00 0.00 0.00 3.96
4897 5524 5.944007 AGGAAACGAAAGGTAATGCACTAAT 59.056 36.000 0.00 0.00 0.00 1.73
4948 5579 2.952116 TGTTTTCGTTCTCCCCCAATT 58.048 42.857 0.00 0.00 0.00 2.32
4950 5581 4.471548 TGTTTTCGTTCTCCCCCAATTTA 58.528 39.130 0.00 0.00 0.00 1.40
4956 5587 4.877251 TCGTTCTCCCCCAATTTAATAACG 59.123 41.667 0.00 0.00 38.70 3.18
4960 5591 4.642885 TCTCCCCCAATTTAATAACGCTTG 59.357 41.667 0.00 0.00 0.00 4.01
4961 5592 3.131400 TCCCCCAATTTAATAACGCTTGC 59.869 43.478 0.00 0.00 0.00 4.01
4972 5603 0.031178 AACGCTTGCTTTCTTGCAGG 59.969 50.000 0.00 0.00 44.27 4.85
4977 5608 2.466846 CTTGCTTTCTTGCAGGTTGTG 58.533 47.619 0.00 0.00 44.27 3.33
5086 5717 9.495572 CTCTGAAATGGTTAGTTTTCTTAGACT 57.504 33.333 0.00 0.00 33.87 3.24
5141 5772 4.082949 GCCAGTAAACTTGGTTACCATGTC 60.083 45.833 20.73 10.48 40.31 3.06
5144 5775 5.467399 CAGTAAACTTGGTTACCATGTCGAA 59.533 40.000 20.73 8.72 40.31 3.71
5164 5795 9.944663 TGTCGAAAATTAAGTGATTATTATGCC 57.055 29.630 0.00 0.00 0.00 4.40
5165 5796 9.394477 GTCGAAAATTAAGTGATTATTATGCCC 57.606 33.333 0.00 0.00 0.00 5.36
5166 5797 8.286800 TCGAAAATTAAGTGATTATTATGCCCG 58.713 33.333 0.00 0.00 0.00 6.13
5167 5798 8.073768 CGAAAATTAAGTGATTATTATGCCCGT 58.926 33.333 0.00 0.00 0.00 5.28
5168 5799 9.180678 GAAAATTAAGTGATTATTATGCCCGTG 57.819 33.333 0.00 0.00 0.00 4.94
5169 5800 7.817418 AATTAAGTGATTATTATGCCCGTGT 57.183 32.000 0.00 0.00 0.00 4.49
5170 5801 7.817418 ATTAAGTGATTATTATGCCCGTGTT 57.183 32.000 0.00 0.00 0.00 3.32
5171 5802 7.633193 TTAAGTGATTATTATGCCCGTGTTT 57.367 32.000 0.00 0.00 0.00 2.83
5172 5803 6.524101 AAGTGATTATTATGCCCGTGTTTT 57.476 33.333 0.00 0.00 0.00 2.43
5177 5808 7.971722 GTGATTATTATGCCCGTGTTTTAGTTT 59.028 33.333 0.00 0.00 0.00 2.66
5180 5811 9.959749 ATTATTATGCCCGTGTTTTAGTTTATG 57.040 29.630 0.00 0.00 0.00 1.90
5192 5824 7.651704 GTGTTTTAGTTTATGTGGATGCTTTGT 59.348 33.333 0.00 0.00 0.00 2.83
5199 5831 3.713858 TGTGGATGCTTTGTCTTGTTG 57.286 42.857 0.00 0.00 0.00 3.33
5209 5841 6.815089 TGCTTTGTCTTGTTGGTTCATAAAT 58.185 32.000 0.00 0.00 0.00 1.40
5213 5845 9.357652 CTTTGTCTTGTTGGTTCATAAATATGG 57.642 33.333 0.84 0.00 34.50 2.74
5218 5850 9.913310 TCTTGTTGGTTCATAAATATGGACATA 57.087 29.630 12.68 0.00 42.72 2.29
5221 5853 9.639563 TGTTGGTTCATAAATATGGACATACAT 57.360 29.630 12.68 0.00 42.72 2.29
5246 5878 0.961753 GCCCCCTCTCAGTTTTGTTG 59.038 55.000 0.00 0.00 0.00 3.33
5299 5931 1.994463 GAGGCATGTTCCTCCAGGT 59.006 57.895 7.90 0.00 45.40 4.00
5440 6075 5.424068 AGGATCACCAATATCCCCAATCTA 58.576 41.667 0.00 0.00 43.44 1.98
5479 6114 1.692411 ACTGCCCAAAGTTGAAGGTC 58.308 50.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
303 316 4.040217 GTGATGTTCCTCCTATCAGCATCT 59.960 45.833 0.00 0.00 34.22 2.90
408 421 1.936547 CCACGCTTCTCCATAGCTTTC 59.063 52.381 0.00 0.00 36.49 2.62
411 424 1.826024 CCCACGCTTCTCCATAGCT 59.174 57.895 0.00 0.00 36.49 3.32
414 427 1.344953 ATGGCCCACGCTTCTCCATA 61.345 55.000 0.00 0.00 35.90 2.74
486 499 1.471501 CCGATCTCACGAGCATGGAAA 60.472 52.381 0.00 0.00 35.09 3.13
795 844 3.120792 CTCGTCGTTGAAGACCTTTTGA 58.879 45.455 0.00 0.00 37.85 2.69
1562 1960 6.336566 TGAGATAGAAACTTGCACTCAGATC 58.663 40.000 0.00 0.00 0.00 2.75
2373 2876 4.437930 GCAGCAACTTGAGCCATAGTAAAG 60.438 45.833 0.00 0.00 0.00 1.85
2393 2896 4.264253 TCCTTCACTAATCCACATTGCAG 58.736 43.478 0.00 0.00 0.00 4.41
2466 2969 5.897824 CAGGTTCCTAGATACCAACTCCTTA 59.102 44.000 13.60 0.00 36.87 2.69
2745 3261 2.301346 GTAGCCAATGAATCACCAGGG 58.699 52.381 0.00 0.00 0.00 4.45
2789 3305 5.549228 ACAGCCATATCTCCAGATTCCATAA 59.451 40.000 0.00 0.00 36.05 1.90
2801 3317 6.712095 TGATTCAACCAATACAGCCATATCTC 59.288 38.462 0.00 0.00 0.00 2.75
2884 3400 2.181975 CTTGCCAATGTTCCCTGGAAT 58.818 47.619 1.26 0.00 36.45 3.01
2945 3461 7.565323 AAGCTATCAGGAAGATTCAACAATC 57.435 36.000 0.00 0.00 39.10 2.67
2950 3466 6.475504 TCACAAAGCTATCAGGAAGATTCAA 58.524 36.000 0.00 0.00 38.19 2.69
2968 3484 1.136695 CAACTGGCCAAGCTTCACAAA 59.863 47.619 7.01 0.00 0.00 2.83
3071 3587 0.632835 ATCACCATCCATGTGGGCTT 59.367 50.000 7.24 0.00 43.77 4.35
3230 3746 3.130516 CCCAGTTTACTAGTGCAGATCGA 59.869 47.826 5.39 0.00 0.00 3.59
3231 3747 3.130516 TCCCAGTTTACTAGTGCAGATCG 59.869 47.826 5.39 0.00 0.00 3.69
3232 3748 4.402793 TCTCCCAGTTTACTAGTGCAGATC 59.597 45.833 5.39 0.00 0.00 2.75
3233 3749 4.353777 TCTCCCAGTTTACTAGTGCAGAT 58.646 43.478 5.39 0.00 0.00 2.90
3290 3806 2.191128 ATTCGTTGCTGCTCTTCCTT 57.809 45.000 0.00 0.00 0.00 3.36
3324 3840 2.158986 CCATGTGGAGGACAGAGCTTAG 60.159 54.545 0.00 0.00 38.23 2.18
3483 3999 3.177884 TGGGGAGCTGGCACAACT 61.178 61.111 0.00 0.00 37.54 3.16
3576 4095 8.508875 TCAGTTTATTTAACCTCGGAAATGAAC 58.491 33.333 6.81 6.81 39.75 3.18
3753 4272 2.628657 GCCTGTACTCCCGATGAAGTAT 59.371 50.000 0.00 0.00 0.00 2.12
3755 4274 0.824759 GCCTGTACTCCCGATGAAGT 59.175 55.000 0.00 0.00 0.00 3.01
3757 4276 1.672854 CGGCCTGTACTCCCGATGAA 61.673 60.000 12.12 0.00 44.55 2.57
3759 4278 2.351336 GACGGCCTGTACTCCCGATG 62.351 65.000 20.66 0.00 44.55 3.84
3778 4297 2.965671 ATGATATCAAGTGGGGGCAG 57.034 50.000 9.99 0.00 0.00 4.85
3794 4313 0.828022 CTAGTGGGGGCAACGTATGA 59.172 55.000 0.00 0.00 37.60 2.15
3817 4336 6.294508 GGGCTTTCAAAATACACTTGAAGCTA 60.295 38.462 13.91 0.00 42.21 3.32
3829 4348 8.217799 AGCTATACTACATGGGCTTTCAAAATA 58.782 33.333 0.00 0.00 0.00 1.40
3835 4354 5.172205 GCTAGCTATACTACATGGGCTTTC 58.828 45.833 7.70 0.00 0.00 2.62
3850 4369 2.806945 TTTTGTGGGCTGCTAGCTAT 57.193 45.000 17.23 0.00 41.99 2.97
3867 4386 6.293571 GCAGCAAGCCAACAATTCTTTATTTT 60.294 34.615 0.00 0.00 37.23 1.82
3952 4538 1.335496 CTCCGTTAGAGCTGCTAGGTC 59.665 57.143 0.15 7.11 42.72 3.85
3981 4567 1.006102 CGGTGCGGTTGAGAGAGTT 60.006 57.895 0.00 0.00 0.00 3.01
4009 4595 3.488090 GCGTCGTTGTAGGCAGGC 61.488 66.667 0.00 0.00 0.00 4.85
4012 4598 2.356553 GTGGCGTCGTTGTAGGCA 60.357 61.111 0.00 0.00 38.13 4.75
4013 4599 2.356553 TGTGGCGTCGTTGTAGGC 60.357 61.111 0.00 0.00 0.00 3.93
4014 4600 2.380410 GCTGTGGCGTCGTTGTAGG 61.380 63.158 0.00 0.00 0.00 3.18
4021 4633 3.264897 GGCTATGCTGTGGCGTCG 61.265 66.667 0.00 0.00 42.25 5.12
4028 4640 1.281199 TGGTGATGGGGCTATGCTGT 61.281 55.000 0.00 0.00 0.00 4.40
4083 4695 7.398829 TGTACTGCATTCCTATTTACCTTGAA 58.601 34.615 0.00 0.00 0.00 2.69
4094 4706 8.892723 CAAAACATAGATTGTACTGCATTCCTA 58.107 33.333 0.00 0.00 37.68 2.94
4100 4712 9.243637 GAAAAACAAAACATAGATTGTACTGCA 57.756 29.630 0.00 0.00 38.75 4.41
4155 4767 5.890334 AGAAATTGCAGACGAACAGAAAAA 58.110 33.333 0.00 0.00 0.00 1.94
4156 4768 5.499139 AGAAATTGCAGACGAACAGAAAA 57.501 34.783 0.00 0.00 0.00 2.29
4157 4769 6.260050 ACTTAGAAATTGCAGACGAACAGAAA 59.740 34.615 0.00 0.00 0.00 2.52
4158 4770 5.758296 ACTTAGAAATTGCAGACGAACAGAA 59.242 36.000 0.00 0.00 0.00 3.02
4159 4771 5.297547 ACTTAGAAATTGCAGACGAACAGA 58.702 37.500 0.00 0.00 0.00 3.41
4160 4772 5.597813 ACTTAGAAATTGCAGACGAACAG 57.402 39.130 0.00 0.00 0.00 3.16
4246 4858 7.254852 ACTTAGAAATTGCAGACGAACAAAAA 58.745 30.769 0.00 0.00 0.00 1.94
4247 4859 6.791303 ACTTAGAAATTGCAGACGAACAAAA 58.209 32.000 0.00 0.00 0.00 2.44
4248 4860 6.037720 TGACTTAGAAATTGCAGACGAACAAA 59.962 34.615 0.00 0.00 0.00 2.83
4249 4861 5.525745 TGACTTAGAAATTGCAGACGAACAA 59.474 36.000 0.00 0.00 0.00 2.83
4255 4867 7.121315 AGGGTTATTGACTTAGAAATTGCAGAC 59.879 37.037 0.00 0.00 0.00 3.51
4330 4942 9.740710 AGTTTGAAGTTTGAACTAGCCTATAAT 57.259 29.630 0.00 0.00 38.57 1.28
4332 4944 9.569122 AAAGTTTGAAGTTTGAACTAGCCTATA 57.431 29.630 0.00 0.00 38.57 1.31
4333 4945 8.465273 AAAGTTTGAAGTTTGAACTAGCCTAT 57.535 30.769 0.00 0.00 38.57 2.57
4413 5025 3.341823 GTCTGTCAATCTGACTGGCAAT 58.658 45.455 11.85 0.00 46.03 3.56
4415 5027 2.462456 GTCTGTCAATCTGACTGGCA 57.538 50.000 11.85 0.00 46.03 4.92
4426 5038 4.335416 GGAATTGGATTGGAGTCTGTCAA 58.665 43.478 0.00 0.00 0.00 3.18
4432 5044 5.997746 TGATTATCGGAATTGGATTGGAGTC 59.002 40.000 0.00 0.00 0.00 3.36
4448 5060 6.226052 TCATGAAGATGAAGGGTGATTATCG 58.774 40.000 0.00 0.00 35.55 2.92
4506 5125 1.761784 TGCAATCAAGTGCCCAAAACT 59.238 42.857 0.00 0.00 44.26 2.66
4513 5132 0.529378 CTTCCCTGCAATCAAGTGCC 59.471 55.000 0.00 0.00 44.26 5.01
4520 5139 2.883386 CTCCATTAGCTTCCCTGCAATC 59.117 50.000 0.00 0.00 34.99 2.67
4570 5197 6.100404 TCGTTGGTTACATTACCTTGTAGT 57.900 37.500 0.00 0.00 39.04 2.73
4571 5198 7.760794 TGTATCGTTGGTTACATTACCTTGTAG 59.239 37.037 0.00 0.00 39.04 2.74
4572 5199 7.609960 TGTATCGTTGGTTACATTACCTTGTA 58.390 34.615 0.00 0.00 39.04 2.41
4573 5200 6.465948 TGTATCGTTGGTTACATTACCTTGT 58.534 36.000 0.00 0.00 39.04 3.16
4589 5216 6.694447 TCAAGCTAGTAAACCTTGTATCGTT 58.306 36.000 6.86 0.00 37.72 3.85
4591 5218 7.591006 TTTCAAGCTAGTAAACCTTGTATCG 57.409 36.000 6.86 0.00 37.72 2.92
4604 5231 8.579850 TGATCACCAATAATTTTCAAGCTAGT 57.420 30.769 0.00 0.00 0.00 2.57
4616 5243 5.121380 AGTTCAGCCTGATCACCAATAAT 57.879 39.130 5.62 0.00 0.00 1.28
4617 5244 4.574674 AGTTCAGCCTGATCACCAATAA 57.425 40.909 5.62 0.00 0.00 1.40
4629 5256 6.808321 TTATAGTCACCATTAGTTCAGCCT 57.192 37.500 0.00 0.00 0.00 4.58
4662 5289 4.341806 AGAGACTACAGGATGCATCAGAAG 59.658 45.833 27.25 19.13 42.53 2.85
4667 5294 2.961741 TCCAGAGACTACAGGATGCATC 59.038 50.000 18.81 18.81 42.53 3.91
4668 5295 2.697751 GTCCAGAGACTACAGGATGCAT 59.302 50.000 0.00 0.00 39.01 3.96
4669 5296 2.103373 GTCCAGAGACTACAGGATGCA 58.897 52.381 0.00 0.00 39.01 3.96
4670 5297 2.880963 GTCCAGAGACTACAGGATGC 57.119 55.000 0.00 0.00 39.01 3.91
4684 5311 4.399004 AGTGCTAGCTTGATAAGTCCAG 57.601 45.455 17.23 0.00 0.00 3.86
4688 5315 6.568869 CAGAGTTAGTGCTAGCTTGATAAGT 58.431 40.000 17.23 11.54 0.00 2.24
4689 5316 5.461737 GCAGAGTTAGTGCTAGCTTGATAAG 59.538 44.000 17.23 0.00 37.96 1.73
4690 5317 5.352284 GCAGAGTTAGTGCTAGCTTGATAA 58.648 41.667 17.23 6.82 37.96 1.75
4691 5318 4.202161 GGCAGAGTTAGTGCTAGCTTGATA 60.202 45.833 17.23 0.59 40.97 2.15
4692 5319 3.431486 GGCAGAGTTAGTGCTAGCTTGAT 60.431 47.826 17.23 1.59 40.97 2.57
4693 5320 2.093973 GGCAGAGTTAGTGCTAGCTTGA 60.094 50.000 17.23 0.00 40.97 3.02
4697 5324 1.205893 ACAGGCAGAGTTAGTGCTAGC 59.794 52.381 8.10 8.10 40.97 3.42
4698 5325 3.257393 CAACAGGCAGAGTTAGTGCTAG 58.743 50.000 0.00 0.00 40.97 3.42
4699 5326 2.632996 ACAACAGGCAGAGTTAGTGCTA 59.367 45.455 0.00 0.00 40.97 3.49
4700 5327 1.417890 ACAACAGGCAGAGTTAGTGCT 59.582 47.619 0.00 0.00 40.97 4.40
4701 5328 1.801178 GACAACAGGCAGAGTTAGTGC 59.199 52.381 0.00 0.00 40.42 4.40
4702 5329 2.802816 GTGACAACAGGCAGAGTTAGTG 59.197 50.000 0.00 0.00 0.00 2.74
4703 5330 2.545952 CGTGACAACAGGCAGAGTTAGT 60.546 50.000 0.00 0.00 0.00 2.24
4705 5332 1.684450 TCGTGACAACAGGCAGAGTTA 59.316 47.619 0.00 0.00 32.75 2.24
4706 5333 0.464036 TCGTGACAACAGGCAGAGTT 59.536 50.000 0.00 0.00 32.75 3.01
4707 5334 0.249489 GTCGTGACAACAGGCAGAGT 60.249 55.000 0.00 0.00 32.75 3.24
4708 5335 0.249447 TGTCGTGACAACAGGCAGAG 60.249 55.000 0.00 0.00 38.56 3.35
4709 5336 0.176910 TTGTCGTGACAACAGGCAGA 59.823 50.000 11.21 0.00 45.42 4.26
4710 5337 2.689083 TTGTCGTGACAACAGGCAG 58.311 52.632 11.21 0.00 45.42 4.85
4711 5338 4.943822 TTGTCGTGACAACAGGCA 57.056 50.000 11.21 0.00 45.42 4.75
4725 5352 8.863427 AAGCACCTCTTAACGTCAAGGATTGT 62.863 42.308 0.00 0.00 39.33 2.71
4726 5353 6.540982 AAGCACCTCTTAACGTCAAGGATTG 61.541 44.000 0.00 0.00 39.54 2.67
4727 5354 3.008049 AGCACCTCTTAACGTCAAGGATT 59.992 43.478 0.00 0.00 32.99 3.01
4728 5355 2.567615 AGCACCTCTTAACGTCAAGGAT 59.432 45.455 0.00 0.00 32.99 3.24
4729 5356 1.968493 AGCACCTCTTAACGTCAAGGA 59.032 47.619 0.00 0.00 32.99 3.36
4730 5357 2.457366 AGCACCTCTTAACGTCAAGG 57.543 50.000 0.00 1.47 34.94 3.61
4731 5358 3.654414 AGAAGCACCTCTTAACGTCAAG 58.346 45.455 0.00 0.00 34.56 3.02
4732 5359 3.069016 TGAGAAGCACCTCTTAACGTCAA 59.931 43.478 0.00 0.00 34.56 3.18
4733 5360 2.626266 TGAGAAGCACCTCTTAACGTCA 59.374 45.455 0.00 0.00 34.56 4.35
4734 5361 3.246619 CTGAGAAGCACCTCTTAACGTC 58.753 50.000 0.00 0.00 34.56 4.34
4735 5362 2.610727 GCTGAGAAGCACCTCTTAACGT 60.611 50.000 6.87 0.00 34.56 3.99
4736 5363 1.996191 GCTGAGAAGCACCTCTTAACG 59.004 52.381 6.87 0.00 34.56 3.18
4737 5364 3.326836 AGCTGAGAAGCACCTCTTAAC 57.673 47.619 0.00 0.00 34.56 2.01
4738 5365 4.711846 TGATAGCTGAGAAGCACCTCTTAA 59.288 41.667 0.00 0.00 34.56 1.85
4739 5366 4.281657 TGATAGCTGAGAAGCACCTCTTA 58.718 43.478 0.00 0.00 34.56 2.10
4740 5367 3.102972 TGATAGCTGAGAAGCACCTCTT 58.897 45.455 0.00 0.00 37.83 2.85
4741 5368 2.744760 TGATAGCTGAGAAGCACCTCT 58.255 47.619 0.00 0.00 37.25 3.69
4742 5369 3.131933 TCTTGATAGCTGAGAAGCACCTC 59.868 47.826 0.00 0.00 37.25 3.85
4743 5370 3.102972 TCTTGATAGCTGAGAAGCACCT 58.897 45.455 0.00 0.00 37.25 4.00
4744 5371 3.533606 TCTTGATAGCTGAGAAGCACC 57.466 47.619 0.00 0.00 37.25 5.01
4745 5372 4.874966 ACAATCTTGATAGCTGAGAAGCAC 59.125 41.667 0.00 0.00 37.25 4.40
4746 5373 4.874396 CACAATCTTGATAGCTGAGAAGCA 59.126 41.667 0.00 0.00 37.25 3.91
4747 5374 5.114780 TCACAATCTTGATAGCTGAGAAGC 58.885 41.667 0.00 0.00 0.00 3.86
4748 5375 6.258287 CCTTCACAATCTTGATAGCTGAGAAG 59.742 42.308 0.00 10.90 34.83 2.85
4749 5376 6.070596 TCCTTCACAATCTTGATAGCTGAGAA 60.071 38.462 0.00 0.00 0.00 2.87
4750 5377 5.423290 TCCTTCACAATCTTGATAGCTGAGA 59.577 40.000 0.00 0.00 0.00 3.27
4751 5378 5.668471 TCCTTCACAATCTTGATAGCTGAG 58.332 41.667 0.00 0.00 0.00 3.35
4752 5379 5.188555 ACTCCTTCACAATCTTGATAGCTGA 59.811 40.000 0.00 0.00 0.00 4.26
4753 5380 5.293814 CACTCCTTCACAATCTTGATAGCTG 59.706 44.000 0.00 0.00 0.00 4.24
4754 5381 5.188555 TCACTCCTTCACAATCTTGATAGCT 59.811 40.000 0.00 0.00 0.00 3.32
4755 5382 5.423015 TCACTCCTTCACAATCTTGATAGC 58.577 41.667 0.00 0.00 0.00 2.97
4756 5383 7.270779 TCATCACTCCTTCACAATCTTGATAG 58.729 38.462 0.00 0.00 0.00 2.08
4757 5384 7.186570 TCATCACTCCTTCACAATCTTGATA 57.813 36.000 0.00 0.00 0.00 2.15
4758 5385 6.058553 TCATCACTCCTTCACAATCTTGAT 57.941 37.500 0.00 0.00 0.00 2.57
4759 5386 5.488262 TCATCACTCCTTCACAATCTTGA 57.512 39.130 0.00 0.00 0.00 3.02
4760 5387 6.754702 AATCATCACTCCTTCACAATCTTG 57.245 37.500 0.00 0.00 0.00 3.02
4761 5388 7.771927 AAAATCATCACTCCTTCACAATCTT 57.228 32.000 0.00 0.00 0.00 2.40
4762 5389 8.900781 CATAAAATCATCACTCCTTCACAATCT 58.099 33.333 0.00 0.00 0.00 2.40
4763 5390 8.896744 TCATAAAATCATCACTCCTTCACAATC 58.103 33.333 0.00 0.00 0.00 2.67
4764 5391 8.812513 TCATAAAATCATCACTCCTTCACAAT 57.187 30.769 0.00 0.00 0.00 2.71
4765 5392 8.634335 TTCATAAAATCATCACTCCTTCACAA 57.366 30.769 0.00 0.00 0.00 3.33
4766 5393 8.680001 CATTCATAAAATCATCACTCCTTCACA 58.320 33.333 0.00 0.00 0.00 3.58
4767 5394 8.896744 TCATTCATAAAATCATCACTCCTTCAC 58.103 33.333 0.00 0.00 0.00 3.18
4768 5395 8.896744 GTCATTCATAAAATCATCACTCCTTCA 58.103 33.333 0.00 0.00 0.00 3.02
4769 5396 9.118300 AGTCATTCATAAAATCATCACTCCTTC 57.882 33.333 0.00 0.00 0.00 3.46
4770 5397 9.471702 AAGTCATTCATAAAATCATCACTCCTT 57.528 29.630 0.00 0.00 0.00 3.36
4771 5398 9.471702 AAAGTCATTCATAAAATCATCACTCCT 57.528 29.630 0.00 0.00 0.00 3.69
4772 5399 9.512435 CAAAGTCATTCATAAAATCATCACTCC 57.488 33.333 0.00 0.00 0.00 3.85
4793 5420 9.921637 TGTTCAACAAATCTTTTTCTACAAAGT 57.078 25.926 0.00 0.00 35.56 2.66
4809 5436 9.883142 ACTTCATTAGGAATTTTGTTCAACAAA 57.117 25.926 11.83 11.83 45.37 2.83
4810 5437 9.311916 CACTTCATTAGGAATTTTGTTCAACAA 57.688 29.630 0.00 0.00 33.68 2.83
4811 5438 7.437862 GCACTTCATTAGGAATTTTGTTCAACA 59.562 33.333 0.00 0.00 34.32 3.33
4812 5439 7.653311 AGCACTTCATTAGGAATTTTGTTCAAC 59.347 33.333 0.00 0.00 34.32 3.18
4813 5440 7.725251 AGCACTTCATTAGGAATTTTGTTCAA 58.275 30.769 0.00 0.00 34.32 2.69
4814 5441 7.288810 AGCACTTCATTAGGAATTTTGTTCA 57.711 32.000 0.00 0.00 34.32 3.18
4815 5442 8.515414 ACTAGCACTTCATTAGGAATTTTGTTC 58.485 33.333 0.00 0.00 34.32 3.18
4816 5443 8.409358 ACTAGCACTTCATTAGGAATTTTGTT 57.591 30.769 0.00 0.00 34.32 2.83
4817 5444 8.409358 AACTAGCACTTCATTAGGAATTTTGT 57.591 30.769 0.00 0.00 34.32 2.83
4821 5448 8.665685 CGTTTAACTAGCACTTCATTAGGAATT 58.334 33.333 0.00 0.00 34.32 2.17
4822 5449 7.822822 ACGTTTAACTAGCACTTCATTAGGAAT 59.177 33.333 0.00 0.00 34.32 3.01
4823 5450 7.156673 ACGTTTAACTAGCACTTCATTAGGAA 58.843 34.615 0.00 0.00 0.00 3.36
4824 5451 6.694447 ACGTTTAACTAGCACTTCATTAGGA 58.306 36.000 0.00 0.00 0.00 2.94
4825 5452 6.963049 ACGTTTAACTAGCACTTCATTAGG 57.037 37.500 0.00 0.00 0.00 2.69
4826 5453 9.314501 GAAAACGTTTAACTAGCACTTCATTAG 57.685 33.333 15.03 0.00 0.00 1.73
4827 5454 8.828644 TGAAAACGTTTAACTAGCACTTCATTA 58.171 29.630 15.03 0.00 0.00 1.90
4828 5455 7.642586 GTGAAAACGTTTAACTAGCACTTCATT 59.357 33.333 15.03 0.00 0.00 2.57
4829 5456 7.130269 GTGAAAACGTTTAACTAGCACTTCAT 58.870 34.615 15.03 0.00 0.00 2.57
4830 5457 6.480285 GTGAAAACGTTTAACTAGCACTTCA 58.520 36.000 15.03 7.26 0.00 3.02
4831 5458 5.614382 CGTGAAAACGTTTAACTAGCACTTC 59.386 40.000 15.03 4.59 0.00 3.01
4832 5459 5.495502 CGTGAAAACGTTTAACTAGCACTT 58.504 37.500 15.03 0.00 0.00 3.16
4833 5460 4.551410 GCGTGAAAACGTTTAACTAGCACT 60.551 41.667 15.03 0.00 35.26 4.40
4834 5461 3.656266 GCGTGAAAACGTTTAACTAGCAC 59.344 43.478 15.03 13.52 35.26 4.40
4835 5462 3.602038 CGCGTGAAAACGTTTAACTAGCA 60.602 43.478 15.03 3.56 35.26 3.49
4836 5463 2.892199 CGCGTGAAAACGTTTAACTAGC 59.108 45.455 15.03 14.57 35.26 3.42
4837 5464 3.060339 ACCGCGTGAAAACGTTTAACTAG 60.060 43.478 15.03 11.30 35.26 2.57
4838 5465 2.863137 ACCGCGTGAAAACGTTTAACTA 59.137 40.909 15.03 0.00 35.26 2.24
4839 5466 1.665169 ACCGCGTGAAAACGTTTAACT 59.335 42.857 15.03 0.00 35.26 2.24
4840 5467 1.769067 CACCGCGTGAAAACGTTTAAC 59.231 47.619 15.03 14.36 35.23 2.01
4841 5468 1.662629 TCACCGCGTGAAAACGTTTAA 59.337 42.857 15.03 2.91 39.78 1.52
4842 5469 1.284657 TCACCGCGTGAAAACGTTTA 58.715 45.000 15.03 0.00 39.78 2.01
4843 5470 2.088180 TCACCGCGTGAAAACGTTT 58.912 47.368 7.96 7.96 39.78 3.60
4844 5471 3.797008 TCACCGCGTGAAAACGTT 58.203 50.000 4.92 0.00 39.78 3.99
4858 5485 1.909700 TTCCTGCCATGGTCTTTCAC 58.090 50.000 14.67 0.00 0.00 3.18
4859 5486 2.238521 GTTTCCTGCCATGGTCTTTCA 58.761 47.619 14.67 0.79 0.00 2.69
4860 5487 1.200020 CGTTTCCTGCCATGGTCTTTC 59.800 52.381 14.67 0.00 0.00 2.62
4861 5488 1.202879 TCGTTTCCTGCCATGGTCTTT 60.203 47.619 14.67 0.00 0.00 2.52
4862 5489 0.400213 TCGTTTCCTGCCATGGTCTT 59.600 50.000 14.67 0.00 0.00 3.01
4863 5490 0.400213 TTCGTTTCCTGCCATGGTCT 59.600 50.000 14.67 0.00 0.00 3.85
4864 5491 1.200020 CTTTCGTTTCCTGCCATGGTC 59.800 52.381 14.67 6.41 0.00 4.02
4865 5492 1.247567 CTTTCGTTTCCTGCCATGGT 58.752 50.000 14.67 0.00 0.00 3.55
4866 5493 0.527565 CCTTTCGTTTCCTGCCATGG 59.472 55.000 7.63 7.63 0.00 3.66
4867 5494 1.247567 ACCTTTCGTTTCCTGCCATG 58.752 50.000 0.00 0.00 0.00 3.66
4868 5495 2.871096 TACCTTTCGTTTCCTGCCAT 57.129 45.000 0.00 0.00 0.00 4.40
4874 5501 5.616488 TTAGTGCATTACCTTTCGTTTCC 57.384 39.130 0.00 0.00 0.00 3.13
4897 5524 8.055181 AGAAGGACAATATAAAGGAAATGAGCA 58.945 33.333 0.00 0.00 0.00 4.26
4911 5538 8.110860 ACGAAAACATGAAAGAAGGACAATAT 57.889 30.769 0.00 0.00 0.00 1.28
4913 5540 6.391227 ACGAAAACATGAAAGAAGGACAAT 57.609 33.333 0.00 0.00 0.00 2.71
4914 5541 5.828299 ACGAAAACATGAAAGAAGGACAA 57.172 34.783 0.00 0.00 0.00 3.18
4915 5542 5.588648 AGAACGAAAACATGAAAGAAGGACA 59.411 36.000 0.00 0.00 0.00 4.02
4916 5543 6.061231 AGAACGAAAACATGAAAGAAGGAC 57.939 37.500 0.00 0.00 0.00 3.85
4917 5544 5.238650 GGAGAACGAAAACATGAAAGAAGGA 59.761 40.000 0.00 0.00 0.00 3.36
4926 5557 1.904287 TGGGGGAGAACGAAAACATG 58.096 50.000 0.00 0.00 0.00 3.21
4928 5559 2.668144 ATTGGGGGAGAACGAAAACA 57.332 45.000 0.00 0.00 0.00 2.83
4934 5565 4.496840 GCGTTATTAAATTGGGGGAGAACG 60.497 45.833 0.00 0.00 39.92 3.95
4948 5579 5.114785 TGCAAGAAAGCAAGCGTTATTAA 57.885 34.783 0.68 0.00 42.46 1.40
4950 5581 3.568538 CTGCAAGAAAGCAAGCGTTATT 58.431 40.909 0.00 0.00 45.13 1.40
4956 5587 1.202452 ACAACCTGCAAGAAAGCAAGC 60.202 47.619 0.00 0.00 45.13 4.01
4960 5591 1.032014 TCCACAACCTGCAAGAAAGC 58.968 50.000 0.00 0.00 34.07 3.51
4961 5592 4.278170 TGTAATCCACAACCTGCAAGAAAG 59.722 41.667 0.00 0.00 31.01 2.62
4996 5627 5.431420 TGCAAAATAGAACGTTGACACAT 57.569 34.783 5.00 0.00 0.00 3.21
5002 5633 4.378616 CCGAAGTTGCAAAATAGAACGTTG 59.621 41.667 5.00 0.00 0.00 4.10
5006 5637 5.516090 TGTTCCGAAGTTGCAAAATAGAAC 58.484 37.500 17.20 17.20 32.65 3.01
5103 5734 9.569122 AAGTTTACTGGCAAGTATCTAAAAAGA 57.431 29.630 0.65 0.00 38.69 2.52
5109 5740 6.368779 ACCAAGTTTACTGGCAAGTATCTA 57.631 37.500 0.65 0.00 38.69 1.98
5119 5750 4.153475 CGACATGGTAACCAAGTTTACTGG 59.847 45.833 0.00 0.00 35.48 4.00
5141 5772 8.073768 ACGGGCATAATAATCACTTAATTTTCG 58.926 33.333 0.00 0.00 0.00 3.46
5144 5775 8.232913 ACACGGGCATAATAATCACTTAATTT 57.767 30.769 0.00 0.00 0.00 1.82
5160 5791 4.082463 CCACATAAACTAAAACACGGGCAT 60.082 41.667 0.00 0.00 0.00 4.40
5161 5792 3.253677 CCACATAAACTAAAACACGGGCA 59.746 43.478 0.00 0.00 0.00 5.36
5162 5793 3.502979 TCCACATAAACTAAAACACGGGC 59.497 43.478 0.00 0.00 0.00 6.13
5163 5794 5.636837 CATCCACATAAACTAAAACACGGG 58.363 41.667 0.00 0.00 0.00 5.28
5164 5795 5.092781 GCATCCACATAAACTAAAACACGG 58.907 41.667 0.00 0.00 0.00 4.94
5165 5796 5.938322 AGCATCCACATAAACTAAAACACG 58.062 37.500 0.00 0.00 0.00 4.49
5166 5797 7.651704 ACAAAGCATCCACATAAACTAAAACAC 59.348 33.333 0.00 0.00 0.00 3.32
5167 5798 7.721402 ACAAAGCATCCACATAAACTAAAACA 58.279 30.769 0.00 0.00 0.00 2.83
5168 5799 8.082242 AGACAAAGCATCCACATAAACTAAAAC 58.918 33.333 0.00 0.00 0.00 2.43
5169 5800 8.177119 AGACAAAGCATCCACATAAACTAAAA 57.823 30.769 0.00 0.00 0.00 1.52
5170 5801 7.759489 AGACAAAGCATCCACATAAACTAAA 57.241 32.000 0.00 0.00 0.00 1.85
5171 5802 7.230510 ACAAGACAAAGCATCCACATAAACTAA 59.769 33.333 0.00 0.00 0.00 2.24
5172 5803 6.714810 ACAAGACAAAGCATCCACATAAACTA 59.285 34.615 0.00 0.00 0.00 2.24
5177 5808 4.218200 CCAACAAGACAAAGCATCCACATA 59.782 41.667 0.00 0.00 0.00 2.29
5180 5811 2.362077 ACCAACAAGACAAAGCATCCAC 59.638 45.455 0.00 0.00 0.00 4.02
5192 5824 8.821686 ATGTCCATATTTATGAACCAACAAGA 57.178 30.769 0.00 0.00 35.75 3.02
5262 5894 3.119708 CCTCAGTTTGCAATTAGTGAGCC 60.120 47.826 22.58 0.00 39.45 4.70
5263 5895 3.671702 GCCTCAGTTTGCAATTAGTGAGC 60.672 47.826 22.58 16.57 39.45 4.26
5268 5900 4.445452 ACATGCCTCAGTTTGCAATTAG 57.555 40.909 0.00 0.00 41.50 1.73
5333 5965 4.645535 AGCTGCTTGACATGTTCTAGAAA 58.354 39.130 6.78 0.00 0.00 2.52
5440 6075 4.999950 CAGTTCTGGATGTTAAGCTTCTGT 59.000 41.667 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.