Multiple sequence alignment - TraesCS7B01G486800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G486800 chr7B 100.000 4601 0 0 1 4601 742588095 742592695 0.000000e+00 8497
1 TraesCS7B01G486800 chr7A 83.109 2528 307 73 1578 4060 732088014 732090466 0.000000e+00 2193
2 TraesCS7B01G486800 chr7A 83.197 857 58 39 689 1496 732087053 732087872 0.000000e+00 706
3 TraesCS7B01G486800 chr7A 85.771 253 19 9 3245 3493 732052521 732052282 7.640000e-63 252
4 TraesCS7B01G486800 chr7A 78.390 236 41 9 2984 3219 732093601 732093826 1.330000e-30 145
5 TraesCS7B01G486800 chr7D 90.692 1214 91 11 2612 3814 634176867 634178069 0.000000e+00 1596
6 TraesCS7B01G486800 chr7D 93.741 687 36 3 1 683 611342382 611341699 0.000000e+00 1024
7 TraesCS7B01G486800 chr7D 88.009 442 41 5 3518 3956 634383044 634383476 3.170000e-141 512
8 TraesCS7B01G486800 chr7D 88.514 296 16 10 1092 1386 634175519 634175797 4.410000e-90 342
9 TraesCS7B01G486800 chr7D 83.380 355 21 19 689 1036 634175106 634175429 1.250000e-75 294
10 TraesCS7B01G486800 chr7D 82.919 322 21 8 2712 3024 634094401 634094105 4.570000e-65 259
11 TraesCS7B01G486800 chr7D 88.050 159 9 3 4435 4584 634180209 634180366 3.660000e-41 180
12 TraesCS7B01G486800 chr7D 86.000 150 20 1 4435 4584 634383665 634383813 4.760000e-35 159
13 TraesCS7B01G486800 chr7D 77.912 249 32 14 3822 4055 634093026 634092786 2.890000e-27 134
14 TraesCS7B01G486800 chr4A 98.113 689 13 0 1 689 36020847 36020159 0.000000e+00 1201
15 TraesCS7B01G486800 chr4A 81.797 434 68 9 2596 3024 687557330 687556903 2.040000e-93 353
16 TraesCS7B01G486800 chr4A 95.000 200 7 3 4223 4421 697946152 697946349 1.240000e-80 311
17 TraesCS7B01G486800 chr6A 97.536 690 17 0 1 690 64567133 64566444 0.000000e+00 1181
18 TraesCS7B01G486800 chr6A 96.657 688 21 2 1 688 81852525 81851840 0.000000e+00 1142
19 TraesCS7B01G486800 chr6A 81.336 434 70 9 2596 3024 558997450 558997023 4.410000e-90 342
20 TraesCS7B01G486800 chr6B 97.384 688 18 0 1 688 557937850 557938537 0.000000e+00 1171
21 TraesCS7B01G486800 chr6B 82.028 434 68 9 2596 3024 32920625 32921053 1.220000e-95 361
22 TraesCS7B01G486800 chr6B 95.477 199 8 1 4223 4421 205275984 205275787 2.670000e-82 316
23 TraesCS7B01G486800 chr6B 94.975 199 9 1 4223 4421 447685135 447685332 1.240000e-80 311
24 TraesCS7B01G486800 chr6B 94.472 199 10 1 4223 4421 66562238 66562435 5.780000e-79 305
25 TraesCS7B01G486800 chr6B 92.857 210 12 3 4214 4421 512913981 512914189 7.480000e-78 302
26 TraesCS7B01G486800 chr5A 97.122 695 19 1 1 694 438852808 438852114 0.000000e+00 1171
27 TraesCS7B01G486800 chr2B 97.238 688 16 1 1 688 392863129 392862445 0.000000e+00 1162
28 TraesCS7B01G486800 chr3B 94.622 688 32 3 1 683 59468364 59469051 0.000000e+00 1061
29 TraesCS7B01G486800 chr1D 93.777 707 38 4 1 702 48875773 48875068 0.000000e+00 1057
30 TraesCS7B01G486800 chrUn 83.333 414 58 7 2596 3004 434751405 434750998 5.620000e-99 372
31 TraesCS7B01G486800 chrUn 85.227 352 44 6 2596 2944 398044493 398044839 5.660000e-94 355
32 TraesCS7B01G486800 chrUn 81.567 434 69 9 2596 3024 407655860 407655433 9.470000e-92 348
33 TraesCS7B01G486800 chrUn 87.296 307 32 3 2596 2900 396150637 396150336 1.230000e-90 344
34 TraesCS7B01G486800 chr5B 83.239 352 49 7 2063 2407 645363792 645364140 9.610000e-82 315
35 TraesCS7B01G486800 chr5B 80.000 340 27 22 1042 1369 27402335 27402645 3.610000e-51 213
36 TraesCS7B01G486800 chr5B 78.553 387 33 27 969 1344 27363264 27363611 4.660000e-50 209
37 TraesCS7B01G486800 chr5D 93.689 206 12 1 4222 4427 538136896 538137100 1.610000e-79 307
38 TraesCS7B01G486800 chr4D 94.500 200 10 1 4222 4421 460837690 460837888 1.610000e-79 307
39 TraesCS7B01G486800 chr6D 94.472 199 10 1 4223 4421 425435603 425435406 5.780000e-79 305
40 TraesCS7B01G486800 chr4B 94.059 202 11 1 4223 4424 292152381 292152181 5.780000e-79 305


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G486800 chr7B 742588095 742592695 4600 False 8497.000000 8497 100.000000 1 4601 1 chr7B.!!$F1 4600
1 TraesCS7B01G486800 chr7A 732087053 732093826 6773 False 1014.666667 2193 81.565333 689 4060 3 chr7A.!!$F1 3371
2 TraesCS7B01G486800 chr7D 611341699 611342382 683 True 1024.000000 1024 93.741000 1 683 1 chr7D.!!$R1 682
3 TraesCS7B01G486800 chr7D 634175106 634180366 5260 False 603.000000 1596 87.659000 689 4584 4 chr7D.!!$F1 3895
4 TraesCS7B01G486800 chr7D 634383044 634383813 769 False 335.500000 512 87.004500 3518 4584 2 chr7D.!!$F2 1066
5 TraesCS7B01G486800 chr4A 36020159 36020847 688 True 1201.000000 1201 98.113000 1 689 1 chr4A.!!$R1 688
6 TraesCS7B01G486800 chr6A 64566444 64567133 689 True 1181.000000 1181 97.536000 1 690 1 chr6A.!!$R1 689
7 TraesCS7B01G486800 chr6A 81851840 81852525 685 True 1142.000000 1142 96.657000 1 688 1 chr6A.!!$R2 687
8 TraesCS7B01G486800 chr6B 557937850 557938537 687 False 1171.000000 1171 97.384000 1 688 1 chr6B.!!$F5 687
9 TraesCS7B01G486800 chr5A 438852114 438852808 694 True 1171.000000 1171 97.122000 1 694 1 chr5A.!!$R1 693
10 TraesCS7B01G486800 chr2B 392862445 392863129 684 True 1162.000000 1162 97.238000 1 688 1 chr2B.!!$R1 687
11 TraesCS7B01G486800 chr3B 59468364 59469051 687 False 1061.000000 1061 94.622000 1 683 1 chr3B.!!$F1 682
12 TraesCS7B01G486800 chr1D 48875068 48875773 705 True 1057.000000 1057 93.777000 1 702 1 chr1D.!!$R1 701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
812 826 0.449993 GCGAACCGCGTAACAGAAAC 60.450 55.0 4.92 0.0 44.55 2.78 F
1469 1585 0.102481 CATGCTCTTGCTGAATGGGC 59.898 55.0 0.00 0.0 40.48 5.36 F
1545 1669 0.179020 TTTGTGTCCTGAGGCCAGTG 60.179 55.0 5.01 0.0 38.74 3.66 F
2879 3145 0.179043 TACACAAAGCACCGGCAGAA 60.179 50.0 0.00 0.0 44.61 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1806 2023 0.179108 ACGGATTACTCTGAAGCGGC 60.179 55.000 0.0 0.0 0.0 6.53 R
2891 3157 0.039165 CCGTCTTGCTTTTCCTTGGC 60.039 55.000 0.0 0.0 0.0 4.52 R
3348 3618 1.400846 CAACTCAGCTCACATGGATGC 59.599 52.381 0.0 0.0 0.0 3.91 R
4254 7457 0.113580 GAGCCCCCAACTAACCCAAA 59.886 55.000 0.0 0.0 0.0 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 113 6.679392 GCATAATGGTAGGTTTATTTGCACGT 60.679 38.462 0.00 0.00 0.00 4.49
121 126 1.610363 TGCACGTATCCAGGCAAAAA 58.390 45.000 0.00 0.00 32.54 1.94
293 298 5.122519 GGGAAAGTGAAGAAGGATGATCTC 58.877 45.833 0.00 0.00 0.00 2.75
450 455 2.239907 GGCCTGGGATACACTTCTTTCT 59.760 50.000 0.00 0.00 39.74 2.52
453 458 4.565652 GCCTGGGATACACTTCTTTCTTGA 60.566 45.833 0.00 0.00 39.74 3.02
503 508 4.996434 GTGTGGGCGAGCTGTGCT 62.996 66.667 7.42 0.00 43.88 4.40
623 634 1.432023 GGACCAAGGGGGACAGGAAA 61.432 60.000 0.00 0.00 41.15 3.13
714 725 2.093306 TTTATGTGGGAGCGTGTGAG 57.907 50.000 0.00 0.00 0.00 3.51
720 731 2.716017 GGGAGCGTGTGAGGAGGAG 61.716 68.421 0.00 0.00 0.00 3.69
721 732 2.716017 GGAGCGTGTGAGGAGGAGG 61.716 68.421 0.00 0.00 0.00 4.30
722 733 1.679305 GAGCGTGTGAGGAGGAGGA 60.679 63.158 0.00 0.00 0.00 3.71
723 734 1.228894 AGCGTGTGAGGAGGAGGAA 60.229 57.895 0.00 0.00 0.00 3.36
724 735 1.216710 GCGTGTGAGGAGGAGGAAG 59.783 63.158 0.00 0.00 0.00 3.46
725 736 1.216710 CGTGTGAGGAGGAGGAAGC 59.783 63.158 0.00 0.00 0.00 3.86
726 737 1.254284 CGTGTGAGGAGGAGGAAGCT 61.254 60.000 0.00 0.00 0.00 3.74
812 826 0.449993 GCGAACCGCGTAACAGAAAC 60.450 55.000 4.92 0.00 44.55 2.78
988 1045 0.845102 CTACCCACCCTCCCAACCTT 60.845 60.000 0.00 0.00 0.00 3.50
990 1047 1.852626 CCCACCCTCCCAACCTTCT 60.853 63.158 0.00 0.00 0.00 2.85
994 1051 2.309504 CCCTCCCAACCTTCTCCCC 61.310 68.421 0.00 0.00 0.00 4.81
1009 1066 3.420482 CCCCCTCCGCATTTCCCT 61.420 66.667 0.00 0.00 0.00 4.20
1012 1071 2.193248 CCTCCGCATTTCCCTCCC 59.807 66.667 0.00 0.00 0.00 4.30
1019 1078 3.029981 ATTTCCCTCCCAGGCCCC 61.030 66.667 0.00 0.00 32.73 5.80
1083 1170 3.870024 TTTGATTTGGGGCCGCCGA 62.870 57.895 18.45 6.73 0.00 5.54
1108 1200 2.163509 GAGGGGAGTTTCTTTTCCTGC 58.836 52.381 0.00 0.00 33.85 4.85
1112 1204 2.288457 GGGAGTTTCTTTTCCTGCTTGC 60.288 50.000 0.00 0.00 33.85 4.01
1116 1208 2.514205 TTCTTTTCCTGCTTGCTTGC 57.486 45.000 0.00 0.00 0.00 4.01
1125 1217 1.329171 TGCTTGCTTGCTTGGTTGGT 61.329 50.000 3.47 0.00 0.00 3.67
1126 1218 0.179076 GCTTGCTTGCTTGGTTGGTT 60.179 50.000 0.00 0.00 0.00 3.67
1128 1220 0.461693 TTGCTTGCTTGGTTGGTTGC 60.462 50.000 0.00 0.00 0.00 4.17
1129 1221 1.950630 GCTTGCTTGGTTGGTTGCG 60.951 57.895 0.00 0.00 0.00 4.85
1303 1395 3.382111 AGGACTTCCTCCAGCACG 58.618 61.111 0.00 0.00 44.77 5.34
1354 1446 2.171725 GCCATCAAGTACGGCGTCC 61.172 63.158 19.21 4.60 35.79 4.79
1387 1483 2.045605 CCCTCTCTCCCATCCCTGATAT 59.954 54.545 0.00 0.00 0.00 1.63
1388 1484 3.273351 CCCTCTCTCCCATCCCTGATATA 59.727 52.174 0.00 0.00 0.00 0.86
1389 1485 4.285863 CCTCTCTCCCATCCCTGATATAC 58.714 52.174 0.00 0.00 0.00 1.47
1391 1487 5.519982 CCTCTCTCCCATCCCTGATATACTT 60.520 48.000 0.00 0.00 0.00 2.24
1394 1490 4.846367 TCTCCCATCCCTGATATACTTTGG 59.154 45.833 0.00 0.00 0.00 3.28
1396 1492 4.981647 TCCCATCCCTGATATACTTTGGTT 59.018 41.667 0.00 0.00 0.00 3.67
1398 1494 5.536161 CCCATCCCTGATATACTTTGGTTTG 59.464 44.000 0.00 0.00 0.00 2.93
1400 1496 4.532834 TCCCTGATATACTTTGGTTTGGC 58.467 43.478 0.00 0.00 0.00 4.52
1401 1497 4.017958 TCCCTGATATACTTTGGTTTGGCA 60.018 41.667 0.00 0.00 0.00 4.92
1403 1499 6.068010 CCCTGATATACTTTGGTTTGGCATA 58.932 40.000 0.00 0.00 0.00 3.14
1404 1500 6.207417 CCCTGATATACTTTGGTTTGGCATAG 59.793 42.308 0.00 0.00 0.00 2.23
1411 1524 2.666272 TGGTTTGGCATAGTTGGTGA 57.334 45.000 0.00 0.00 0.00 4.02
1412 1525 2.235016 TGGTTTGGCATAGTTGGTGAC 58.765 47.619 0.00 0.00 0.00 3.67
1421 1534 0.608130 TAGTTGGTGACGAGCTGCAT 59.392 50.000 1.02 0.00 0.00 3.96
1422 1535 0.952497 AGTTGGTGACGAGCTGCATG 60.952 55.000 1.02 0.00 0.00 4.06
1429 1542 2.736721 GTGACGAGCTGCATGTAGAAAA 59.263 45.455 15.68 0.00 0.00 2.29
1445 1558 0.951558 AAAACGGTGGTGATCTGTGC 59.048 50.000 0.00 0.00 0.00 4.57
1454 1570 4.602696 GATCTGTGCGCGCCATGC 62.603 66.667 30.77 16.36 41.47 4.06
1468 1584 0.744874 CCATGCTCTTGCTGAATGGG 59.255 55.000 0.00 0.00 36.91 4.00
1469 1585 0.102481 CATGCTCTTGCTGAATGGGC 59.898 55.000 0.00 0.00 40.48 5.36
1476 1592 1.243342 TTGCTGAATGGGCAGGAACG 61.243 55.000 0.00 0.00 40.59 3.95
1479 1595 1.019673 CTGAATGGGCAGGAACGATG 58.980 55.000 0.00 0.00 32.26 3.84
1496 1620 8.375506 AGGAACGATGCTATTATCAAGGAATTA 58.624 33.333 0.00 0.00 0.00 1.40
1525 1649 6.856757 AGATGGGAAAATTAGGATATGCAGT 58.143 36.000 0.00 0.00 0.00 4.40
1534 1658 6.699575 ATTAGGATATGCAGTTTTGTGTCC 57.300 37.500 0.00 0.00 0.00 4.02
1541 1665 0.954452 CAGTTTTGTGTCCTGAGGCC 59.046 55.000 0.00 0.00 0.00 5.19
1545 1669 0.179020 TTTGTGTCCTGAGGCCAGTG 60.179 55.000 5.01 0.00 38.74 3.66
1548 1672 2.348998 GTCCTGAGGCCAGTGTGG 59.651 66.667 5.01 0.00 41.55 4.17
1559 1683 2.995466 CCAGTGTGGCTGTAATTGTG 57.005 50.000 0.00 0.00 43.55 3.33
1560 1684 1.068333 CCAGTGTGGCTGTAATTGTGC 60.068 52.381 0.00 0.00 43.55 4.57
1564 1688 2.027385 TGTGGCTGTAATTGTGCACAA 58.973 42.857 32.78 32.78 40.51 3.33
1565 1689 2.223688 TGTGGCTGTAATTGTGCACAAC 60.224 45.455 33.29 22.22 38.86 3.32
1569 1693 3.243367 GGCTGTAATTGTGCACAACAGAA 60.243 43.478 36.88 23.01 40.74 3.02
1573 1697 4.637977 TGTAATTGTGCACAACAGAAGACA 59.362 37.500 33.29 24.15 40.74 3.41
1574 1698 3.976793 ATTGTGCACAACAGAAGACAG 57.023 42.857 33.29 0.00 40.74 3.51
1575 1699 1.016627 TGTGCACAACAGAAGACAGC 58.983 50.000 19.28 0.00 33.78 4.40
1576 1700 1.016627 GTGCACAACAGAAGACAGCA 58.983 50.000 13.17 0.00 0.00 4.41
1579 1703 1.672881 GCACAACAGAAGACAGCACTT 59.327 47.619 0.00 0.00 0.00 3.16
1595 1787 1.334869 CACTTGTCTTGCACCACTTCC 59.665 52.381 0.00 0.00 0.00 3.46
1598 1790 1.679139 TGTCTTGCACCACTTCCAAG 58.321 50.000 0.00 0.00 37.80 3.61
1628 1827 3.458189 GAACTACGCTGTTCATGGCTAT 58.542 45.455 13.89 0.00 44.00 2.97
1630 1829 1.528586 CTACGCTGTTCATGGCTATGC 59.471 52.381 4.95 0.00 34.21 3.14
1633 1832 0.305922 GCTGTTCATGGCTATGCGTC 59.694 55.000 4.95 0.00 34.21 5.19
1637 1836 1.942657 GTTCATGGCTATGCGTCATGT 59.057 47.619 4.95 0.00 39.25 3.21
1649 1848 3.802866 TGCGTCATGTAATCCTGCAATA 58.197 40.909 0.00 0.00 0.00 1.90
1682 1899 3.162666 TCTGATGAGTTTAGGGTGTCGT 58.837 45.455 0.00 0.00 0.00 4.34
1685 1902 1.045407 TGAGTTTAGGGTGTCGTGCT 58.955 50.000 0.00 0.00 0.00 4.40
1717 1934 5.593968 TCTGTATTTGCATTGCATTGATCC 58.406 37.500 12.95 0.00 38.76 3.36
1721 1938 0.456628 TGCATTGCATTGATCCGTGG 59.543 50.000 7.38 0.00 31.71 4.94
1725 1942 0.527113 TTGCATTGATCCGTGGCAAG 59.473 50.000 6.97 0.00 39.33 4.01
1730 1947 0.461870 TTGATCCGTGGCAAGATCCG 60.462 55.000 20.23 6.85 38.50 4.18
1731 1948 1.144057 GATCCGTGGCAAGATCCGT 59.856 57.895 14.80 0.00 34.11 4.69
1732 1949 0.876342 GATCCGTGGCAAGATCCGTC 60.876 60.000 14.80 0.00 34.11 4.79
1733 1950 2.311688 ATCCGTGGCAAGATCCGTCC 62.312 60.000 0.76 0.00 0.00 4.79
1734 1951 2.885644 CGTGGCAAGATCCGTCCG 60.886 66.667 0.00 0.00 0.00 4.79
1777 1994 1.860950 GTATGTGGCTGTCATAGTGCG 59.139 52.381 0.00 0.00 0.00 5.34
1779 1996 2.125147 TGGCTGTCATAGTGCGCC 60.125 61.111 4.18 0.00 41.06 6.53
1780 1997 2.125147 GGCTGTCATAGTGCGCCA 60.125 61.111 4.18 0.00 40.41 5.69
1788 2005 2.401766 ATAGTGCGCCAGTGCTTGC 61.402 57.895 4.18 0.00 35.36 4.01
1789 2006 3.823397 TAGTGCGCCAGTGCTTGCA 62.823 57.895 4.18 0.00 32.44 4.08
1804 2021 3.248266 GCTTGCACAGCCTTTAATCTTG 58.752 45.455 9.03 0.00 43.65 3.02
1805 2022 3.305608 GCTTGCACAGCCTTTAATCTTGT 60.306 43.478 9.03 0.00 43.65 3.16
1806 2023 3.921119 TGCACAGCCTTTAATCTTGTG 57.079 42.857 0.00 0.00 0.00 3.33
1815 2032 3.426695 CCTTTAATCTTGTGCCGCTTCAG 60.427 47.826 0.00 0.00 0.00 3.02
1817 2034 1.446907 AATCTTGTGCCGCTTCAGAG 58.553 50.000 0.00 0.00 0.00 3.35
1818 2035 0.322975 ATCTTGTGCCGCTTCAGAGT 59.677 50.000 0.00 0.00 0.00 3.24
1819 2036 0.966179 TCTTGTGCCGCTTCAGAGTA 59.034 50.000 0.00 0.00 0.00 2.59
1821 2038 2.028112 TCTTGTGCCGCTTCAGAGTAAT 60.028 45.455 0.00 0.00 0.00 1.89
1827 2046 1.134367 CCGCTTCAGAGTAATCCGTGA 59.866 52.381 0.00 0.00 0.00 4.35
1831 2050 3.443037 CTTCAGAGTAATCCGTGAGCTG 58.557 50.000 0.00 0.00 0.00 4.24
1835 2054 0.458543 AGTAATCCGTGAGCTGTGCG 60.459 55.000 0.00 0.00 0.00 5.34
1847 2066 1.293924 GCTGTGCGCTTCATAGTCAT 58.706 50.000 9.73 0.00 36.43 3.06
1848 2067 1.004185 GCTGTGCGCTTCATAGTCATG 60.004 52.381 9.73 0.00 36.43 3.07
1853 2072 0.249447 CGCTTCATAGTCATGGGCGA 60.249 55.000 15.29 0.00 46.88 5.54
1861 2080 2.550830 AGTCATGGGCGATGTAATCC 57.449 50.000 9.39 0.00 41.39 3.01
1864 2083 0.877071 CATGGGCGATGTAATCCTGC 59.123 55.000 0.78 0.00 41.39 4.85
1869 2088 2.350522 GGCGATGTAATCCTGCTATGG 58.649 52.381 0.00 0.00 41.39 2.74
1908 2127 0.708370 CACCGAGTTTCGACATCACG 59.292 55.000 0.00 0.00 43.74 4.35
1911 2130 1.334992 CGAGTTTCGACATCACGCGT 61.335 55.000 5.58 5.58 43.74 6.01
1912 2131 0.362512 GAGTTTCGACATCACGCGTC 59.637 55.000 9.86 0.00 0.00 5.19
1913 2132 0.318360 AGTTTCGACATCACGCGTCA 60.318 50.000 9.86 0.00 32.72 4.35
1914 2133 0.713883 GTTTCGACATCACGCGTCAT 59.286 50.000 9.86 0.00 32.72 3.06
1915 2134 0.989164 TTTCGACATCACGCGTCATC 59.011 50.000 9.86 3.42 32.72 2.92
1916 2135 0.800683 TTCGACATCACGCGTCATCC 60.801 55.000 9.86 0.00 32.72 3.51
1927 2148 2.513897 GTCATCCTTTCGCGGGGG 60.514 66.667 6.13 6.42 0.00 5.40
1947 2168 0.610687 GTTCCTGGGAGGAGTGACAG 59.389 60.000 0.00 0.00 46.73 3.51
1948 2169 0.545309 TTCCTGGGAGGAGTGACAGG 60.545 60.000 3.24 3.24 46.73 4.00
1955 2176 2.507471 GGGAGGAGTGACAGGATGAAAT 59.493 50.000 0.00 0.00 39.69 2.17
1959 2180 3.009916 AGGAGTGACAGGATGAAATGCTT 59.990 43.478 0.00 0.00 45.52 3.91
1986 2207 3.181774 GCATTTGCATTGCAGATCGATTC 59.818 43.478 11.43 0.00 40.61 2.52
1990 2211 1.599071 GCATTGCAGATCGATTCGGAA 59.401 47.619 6.18 1.65 0.00 4.30
1991 2212 2.349249 GCATTGCAGATCGATTCGGAAG 60.349 50.000 6.18 0.00 0.00 3.46
1999 2220 5.335740 GCAGATCGATTCGGAAGTCCTATTA 60.336 44.000 6.18 0.00 0.00 0.98
2005 2226 3.967467 TCGGAAGTCCTATTAGTCCCT 57.033 47.619 0.00 0.00 0.00 4.20
2011 2232 6.608922 GGAAGTCCTATTAGTCCCTGTAGTA 58.391 44.000 0.00 0.00 0.00 1.82
2029 2250 7.222224 CCTGTAGTATATTTGGTTCGAGTTGTC 59.778 40.741 0.00 0.00 0.00 3.18
2036 2257 6.817765 ATTTGGTTCGAGTTGTCATTATGT 57.182 33.333 0.00 0.00 0.00 2.29
2040 2261 4.201724 GGTTCGAGTTGTCATTATGTCTGC 60.202 45.833 0.00 0.00 0.00 4.26
2045 2266 5.171339 AGTTGTCATTATGTCTGCCTCTT 57.829 39.130 0.00 0.00 0.00 2.85
2054 2278 7.981789 TCATTATGTCTGCCTCTTAAAGTACAG 59.018 37.037 0.00 0.00 0.00 2.74
2055 2279 3.926616 TGTCTGCCTCTTAAAGTACAGC 58.073 45.455 0.00 0.00 30.83 4.40
2085 2309 6.183360 CCGACTTTGGTTACCATGTTAAGATC 60.183 42.308 17.40 11.07 31.53 2.75
2091 2315 7.447374 TGGTTACCATGTTAAGATCACTTTG 57.553 36.000 0.00 0.00 37.53 2.77
2095 2319 9.744468 GTTACCATGTTAAGATCACTTTGTTTT 57.256 29.630 0.00 0.00 37.53 2.43
2096 2320 9.743057 TTACCATGTTAAGATCACTTTGTTTTG 57.257 29.630 0.00 0.00 37.53 2.44
2097 2321 7.781056 ACCATGTTAAGATCACTTTGTTTTGT 58.219 30.769 0.00 0.00 37.53 2.83
2098 2322 7.920682 ACCATGTTAAGATCACTTTGTTTTGTC 59.079 33.333 0.00 0.00 37.53 3.18
2134 2358 5.203060 ACATTAAGAGGGCGAATAGTCTC 57.797 43.478 0.00 0.00 0.00 3.36
2135 2359 4.649674 ACATTAAGAGGGCGAATAGTCTCA 59.350 41.667 0.00 0.00 0.00 3.27
2158 2382 1.215244 CTGACAGCCAGATGTATGCG 58.785 55.000 0.00 0.00 45.78 4.73
2183 2407 4.080356 ACAAGGCATTGCTCATACCTCTAA 60.080 41.667 11.69 0.00 40.27 2.10
2214 2438 0.463295 ATGCCATCCTCTGTGAAGCG 60.463 55.000 0.00 0.00 0.00 4.68
2270 2495 7.781324 ACATTTCCTCATGTTAATTGTTCCT 57.219 32.000 0.00 0.00 33.29 3.36
2346 2573 9.535878 TTTATTGTTATTGGTTTTTGGTCAGTC 57.464 29.630 0.00 0.00 0.00 3.51
2353 2580 6.723298 TTGGTTTTTGGTCAGTCACATATT 57.277 33.333 0.00 0.00 0.00 1.28
2366 2596 5.643348 CAGTCACATATTAACTGCAACCTGA 59.357 40.000 0.00 0.00 34.55 3.86
2367 2597 6.149308 CAGTCACATATTAACTGCAACCTGAA 59.851 38.462 0.00 0.00 34.55 3.02
2382 2612 3.214328 ACCTGAATTCTTGTTGACGCTT 58.786 40.909 7.05 0.00 0.00 4.68
2393 2623 7.129109 TCTTGTTGACGCTTATTTTCTAAGG 57.871 36.000 0.00 0.00 0.00 2.69
2407 2637 7.653767 ATTTTCTAAGGTCAAACTACTGTCG 57.346 36.000 0.00 0.00 0.00 4.35
2408 2638 6.395426 TTTCTAAGGTCAAACTACTGTCGA 57.605 37.500 0.00 0.00 0.00 4.20
2410 2640 5.766222 TCTAAGGTCAAACTACTGTCGAAC 58.234 41.667 0.00 0.00 0.00 3.95
2416 2646 5.276726 GGTCAAACTACTGTCGAACAAAGAC 60.277 44.000 0.00 0.00 38.98 3.01
2440 2670 9.282247 GACAACTCATTTTAGCAGTTCATAATG 57.718 33.333 0.00 0.00 0.00 1.90
2451 2681 3.511146 CAGTTCATAATGTTGGCCCTGTT 59.489 43.478 0.00 0.00 0.00 3.16
2494 2741 4.260139 TGCTGTTGCATCATGACATTTT 57.740 36.364 0.00 0.00 45.31 1.82
2495 2742 3.991121 TGCTGTTGCATCATGACATTTTG 59.009 39.130 0.00 0.00 45.31 2.44
2500 2747 2.273557 GCATCATGACATTTTGCCCAC 58.726 47.619 6.93 0.00 0.00 4.61
2563 2818 5.917541 TTGTTCTTTCGTACCAGACATTC 57.082 39.130 0.00 0.00 0.00 2.67
2564 2819 4.312443 TGTTCTTTCGTACCAGACATTCC 58.688 43.478 0.00 0.00 0.00 3.01
2569 2824 6.338146 TCTTTCGTACCAGACATTCCTAATG 58.662 40.000 0.00 0.00 44.48 1.90
2575 2830 5.028549 ACCAGACATTCCTAATGCTGTAG 57.971 43.478 15.97 9.09 42.69 2.74
2592 2847 5.526111 TGCTGTAGTTGAACTTAAGAACACC 59.474 40.000 10.09 1.62 0.00 4.16
2686 2952 8.547967 TTGTGGATTCACTAGATTCAGTTAAC 57.452 34.615 5.55 0.00 43.94 2.01
2694 2960 9.742144 TTCACTAGATTCAGTTAACTCTAGACT 57.258 33.333 25.15 15.46 39.59 3.24
2779 3045 4.747108 GGAGATGACATGGATTTGAGTACG 59.253 45.833 0.00 0.00 0.00 3.67
2872 3138 1.873591 CCTGACAGTACACAAAGCACC 59.126 52.381 0.93 0.00 0.00 5.01
2879 3145 0.179043 TACACAAAGCACCGGCAGAA 60.179 50.000 0.00 0.00 44.61 3.02
2920 3186 1.883084 GCAAGACGGCTCCATACGG 60.883 63.158 0.00 0.00 0.00 4.02
2938 3204 2.668212 CGGCGGCAGAAAGTGGAA 60.668 61.111 10.53 0.00 0.00 3.53
2941 3207 2.982744 GCGGCAGAAAGTGGAAGCC 61.983 63.158 0.00 0.00 41.86 4.35
2959 3225 1.728426 CGACACCAACGACGACCTC 60.728 63.158 0.00 0.00 0.00 3.85
3034 3300 2.954611 CGTCTGAGCACGGACTCA 59.045 61.111 19.08 9.03 46.70 3.41
3208 3474 2.432628 CACGAGTCCTTCACCCGC 60.433 66.667 0.00 0.00 0.00 6.13
3274 3540 0.607620 AAGCTGCTCTGGACTGAGTC 59.392 55.000 3.47 3.47 36.51 3.36
3277 3543 1.672441 GCTGCTCTGGACTGAGTCTTG 60.672 57.143 12.92 5.86 36.51 3.02
3302 3568 2.587753 TGCCGGCGCAATAGTAGC 60.588 61.111 23.90 0.82 43.74 3.58
3306 3572 0.596577 CCGGCGCAATAGTAGCTCTA 59.403 55.000 10.83 0.00 0.00 2.43
3348 3618 1.735376 GCAAGCTCCATCTGCCATGG 61.735 60.000 7.63 7.63 40.48 3.66
3389 3666 1.492599 GGAGGGAAATGGAAGAGGAGG 59.507 57.143 0.00 0.00 0.00 4.30
3402 3679 0.322008 GAGGAGGCTTGGTTGGACAG 60.322 60.000 0.00 0.00 0.00 3.51
3408 3685 1.880819 GCTTGGTTGGACAGGCATGG 61.881 60.000 2.31 0.00 42.36 3.66
3496 3780 6.862608 GTCAAAATGACATTGTAGTTGCATCA 59.137 34.615 0.34 0.00 46.22 3.07
3622 3914 1.197036 GTTAACCGGCTTGTCTGCTTC 59.803 52.381 0.00 0.00 0.00 3.86
3630 3922 1.135859 GCTTGTCTGCTTCATTCGGTG 60.136 52.381 0.00 0.00 0.00 4.94
3636 3928 2.234661 TCTGCTTCATTCGGTGTGATCT 59.765 45.455 0.00 0.00 0.00 2.75
3670 3965 3.360249 AGTGCAAAAATGCAGTCACTC 57.640 42.857 3.35 0.00 44.30 3.51
3699 3994 7.986085 ATTTTCCTGTACATATGGTATCTGC 57.014 36.000 7.80 0.00 33.76 4.26
3785 4081 2.354188 GCCCGTTGTTCGTTTGCC 60.354 61.111 0.00 0.00 37.94 4.52
3799 4096 1.954382 GTTTGCCCTTTCCGAGACTTT 59.046 47.619 0.00 0.00 0.00 2.66
3805 4102 3.211045 CCCTTTCCGAGACTTTGTTCAA 58.789 45.455 0.00 0.00 0.00 2.69
3812 4109 3.070018 CGAGACTTTGTTCAATGCCTCT 58.930 45.455 10.84 3.63 0.00 3.69
3813 4110 4.245660 CGAGACTTTGTTCAATGCCTCTA 58.754 43.478 10.84 0.00 0.00 2.43
3814 4111 4.092091 CGAGACTTTGTTCAATGCCTCTAC 59.908 45.833 10.84 0.00 0.00 2.59
3815 4112 4.973168 AGACTTTGTTCAATGCCTCTACA 58.027 39.130 0.00 0.00 0.00 2.74
3856 4275 7.420800 TGAAGAAGAAAGCTTTGAAGAATCAC 58.579 34.615 18.30 0.00 34.61 3.06
3879 4298 2.722094 TGGTTGCAACTATCCATGGAC 58.278 47.619 27.64 3.39 0.00 4.02
3888 4307 4.392921 ACTATCCATGGACAGACTTTCG 57.607 45.455 26.87 3.18 0.00 3.46
3912 4342 4.870221 ACACAGTAGAAACAAAACGTCC 57.130 40.909 0.00 0.00 0.00 4.79
3913 4343 4.255301 ACACAGTAGAAACAAAACGTCCA 58.745 39.130 0.00 0.00 0.00 4.02
3925 4355 1.724582 AACGTCCAGTGTTTGCAGGC 61.725 55.000 0.00 0.00 0.00 4.85
3960 4390 1.586028 CAGATGCAACCCCCGTTTG 59.414 57.895 0.00 0.00 0.00 2.93
3962 4392 1.906333 GATGCAACCCCCGTTTGGT 60.906 57.895 0.00 0.00 37.85 3.67
3963 4393 2.153547 GATGCAACCCCCGTTTGGTG 62.154 60.000 0.00 0.00 35.88 4.17
3976 4406 2.032030 CGTTTGGTGTGGTGAACTCATC 60.032 50.000 0.00 0.00 0.00 2.92
3977 4407 1.877637 TTGGTGTGGTGAACTCATCG 58.122 50.000 0.00 0.00 0.00 3.84
3979 4409 1.964933 TGGTGTGGTGAACTCATCGTA 59.035 47.619 0.00 0.00 0.00 3.43
3985 4674 6.420008 GGTGTGGTGAACTCATCGTATTATAC 59.580 42.308 0.00 0.00 0.00 1.47
4018 4707 7.733773 ATCATCAATATATTCAGTACGGGGA 57.266 36.000 0.00 0.00 0.00 4.81
4020 4709 7.969004 TCATCAATATATTCAGTACGGGGAAA 58.031 34.615 0.00 0.00 0.00 3.13
4030 4721 3.737172 CGGGGAAAAGGCAGCACG 61.737 66.667 0.00 0.00 0.00 5.34
4032 4723 1.901464 GGGGAAAAGGCAGCACGAA 60.901 57.895 0.00 0.00 0.00 3.85
4046 4737 3.970610 CAGCACGAAGTTTCTTGATTGTG 59.029 43.478 2.90 0.00 41.61 3.33
4051 4742 6.258160 CACGAAGTTTCTTGATTGTGTTTCT 58.742 36.000 0.00 0.00 41.61 2.52
4052 4743 6.747280 CACGAAGTTTCTTGATTGTGTTTCTT 59.253 34.615 0.00 0.00 41.61 2.52
4054 4745 7.484959 ACGAAGTTTCTTGATTGTGTTTCTTTC 59.515 33.333 0.00 0.00 37.78 2.62
4055 4746 7.484641 CGAAGTTTCTTGATTGTGTTTCTTTCA 59.515 33.333 0.00 0.00 0.00 2.69
4057 4748 8.638685 AGTTTCTTGATTGTGTTTCTTTCATG 57.361 30.769 0.00 0.00 0.00 3.07
4059 4750 8.872845 GTTTCTTGATTGTGTTTCTTTCATGTT 58.127 29.630 0.00 0.00 0.00 2.71
4060 4751 7.990541 TCTTGATTGTGTTTCTTTCATGTTG 57.009 32.000 0.00 0.00 0.00 3.33
4061 4752 6.476380 TCTTGATTGTGTTTCTTTCATGTTGC 59.524 34.615 0.00 0.00 0.00 4.17
4062 4753 5.658468 TGATTGTGTTTCTTTCATGTTGCA 58.342 33.333 0.00 0.00 0.00 4.08
4064 4755 5.776519 TTGTGTTTCTTTCATGTTGCAAC 57.223 34.783 22.83 22.83 0.00 4.17
4065 4756 4.814147 TGTGTTTCTTTCATGTTGCAACA 58.186 34.783 32.78 32.78 44.06 3.33
4066 4757 4.624882 TGTGTTTCTTTCATGTTGCAACAC 59.375 37.500 33.29 17.39 42.51 3.32
4075 5790 0.457851 TGTTGCAACACGGGGAAAAG 59.542 50.000 27.96 0.00 33.17 2.27
4083 5798 0.825840 CACGGGGAAAAGGCAGGAAA 60.826 55.000 0.00 0.00 0.00 3.13
4127 7202 3.667497 GATGATGGCATCGGAGAACTA 57.333 47.619 21.65 2.73 43.58 2.24
4129 7204 1.412710 TGATGGCATCGGAGAACTACC 59.587 52.381 21.65 0.00 43.58 3.18
4144 7219 3.530265 ACTACCGGCATTTCGATTGTA 57.470 42.857 0.00 0.00 0.00 2.41
4176 7378 2.156098 GCGGTTCTGTATTGGGTTCAA 58.844 47.619 0.00 0.00 37.28 2.69
4177 7379 2.752903 GCGGTTCTGTATTGGGTTCAAT 59.247 45.455 0.00 0.00 44.87 2.57
4178 7380 3.942748 GCGGTTCTGTATTGGGTTCAATA 59.057 43.478 0.00 0.00 42.90 1.90
4201 7404 5.053145 ACTCAATTCAGTTCAGAGTGTGTC 58.947 41.667 0.00 0.00 38.08 3.67
4216 7419 5.882557 AGAGTGTGTCAACAGAACAAAATCT 59.117 36.000 0.00 0.00 35.15 2.40
4222 7425 5.008217 TGTCAACAGAACAAAATCTAACCCG 59.992 40.000 0.00 0.00 0.00 5.28
4225 7428 2.163613 CAGAACAAAATCTAACCCGGCC 59.836 50.000 0.00 0.00 0.00 6.13
4226 7429 1.475280 GAACAAAATCTAACCCGGCCC 59.525 52.381 0.00 0.00 0.00 5.80
4229 7432 0.702316 AAAATCTAACCCGGCCCTGT 59.298 50.000 0.00 0.00 0.00 4.00
4231 7434 0.702316 AATCTAACCCGGCCCTGTTT 59.298 50.000 9.60 0.00 0.00 2.83
4233 7436 1.677633 CTAACCCGGCCCTGTTTGG 60.678 63.158 9.60 0.00 0.00 3.28
4235 7438 1.502527 TAACCCGGCCCTGTTTGGAT 61.503 55.000 9.60 0.00 38.35 3.41
4237 7440 2.354729 CCGGCCCTGTTTGGATCA 59.645 61.111 0.00 0.00 38.35 2.92
4238 7441 1.304052 CCGGCCCTGTTTGGATCAA 60.304 57.895 0.00 0.00 38.35 2.57
4239 7442 0.684153 CCGGCCCTGTTTGGATCAAT 60.684 55.000 0.00 0.00 38.35 2.57
4240 7443 0.457035 CGGCCCTGTTTGGATCAATG 59.543 55.000 0.00 0.00 38.35 2.82
4241 7444 0.826062 GGCCCTGTTTGGATCAATGG 59.174 55.000 0.00 0.00 38.35 3.16
4243 7446 1.488390 CCCTGTTTGGATCAATGGGG 58.512 55.000 0.00 0.00 38.35 4.96
4245 7448 2.539302 CCTGTTTGGATCAATGGGGTT 58.461 47.619 0.00 0.00 38.35 4.11
4247 7450 3.701040 CCTGTTTGGATCAATGGGGTTAG 59.299 47.826 0.00 0.00 38.35 2.34
4248 7451 4.569653 CCTGTTTGGATCAATGGGGTTAGA 60.570 45.833 0.00 0.00 38.35 2.10
4249 7452 4.599041 TGTTTGGATCAATGGGGTTAGAG 58.401 43.478 0.00 0.00 0.00 2.43
4251 7454 2.492025 TGGATCAATGGGGTTAGAGCT 58.508 47.619 0.00 0.00 0.00 4.09
4252 7455 3.664320 TGGATCAATGGGGTTAGAGCTA 58.336 45.455 0.00 0.00 0.00 3.32
4253 7456 3.648067 TGGATCAATGGGGTTAGAGCTAG 59.352 47.826 0.00 0.00 0.00 3.42
4254 7457 3.648545 GGATCAATGGGGTTAGAGCTAGT 59.351 47.826 0.00 0.00 0.00 2.57
4255 7458 4.103311 GGATCAATGGGGTTAGAGCTAGTT 59.897 45.833 0.00 0.00 0.00 2.24
4256 7459 5.398012 GGATCAATGGGGTTAGAGCTAGTTT 60.398 44.000 0.00 0.00 0.00 2.66
4257 7460 4.843728 TCAATGGGGTTAGAGCTAGTTTG 58.156 43.478 0.00 0.00 0.00 2.93
4258 7461 3.933861 ATGGGGTTAGAGCTAGTTTGG 57.066 47.619 0.00 0.00 0.00 3.28
4259 7462 1.913419 TGGGGTTAGAGCTAGTTTGGG 59.087 52.381 0.00 0.00 0.00 4.12
4260 7463 1.914108 GGGGTTAGAGCTAGTTTGGGT 59.086 52.381 0.00 0.00 0.00 4.51
4262 7465 3.520721 GGGGTTAGAGCTAGTTTGGGTTA 59.479 47.826 0.00 0.00 0.00 2.85
4264 7467 4.224594 GGGTTAGAGCTAGTTTGGGTTAGT 59.775 45.833 0.00 0.00 0.00 2.24
4265 7468 5.280368 GGGTTAGAGCTAGTTTGGGTTAGTT 60.280 44.000 0.00 0.00 0.00 2.24
4266 7469 5.642491 GGTTAGAGCTAGTTTGGGTTAGTTG 59.358 44.000 0.00 0.00 0.00 3.16
4270 7473 2.882643 GCTAGTTTGGGTTAGTTGGGGG 60.883 54.545 0.00 0.00 0.00 5.40
4271 7474 0.178944 AGTTTGGGTTAGTTGGGGGC 60.179 55.000 0.00 0.00 0.00 5.80
4273 7476 0.113580 TTTGGGTTAGTTGGGGGCTC 59.886 55.000 0.00 0.00 0.00 4.70
4274 7477 1.068943 TTGGGTTAGTTGGGGGCTCA 61.069 55.000 0.00 0.00 0.00 4.26
4275 7478 1.068943 TGGGTTAGTTGGGGGCTCAA 61.069 55.000 0.00 0.00 0.00 3.02
4276 7479 0.113580 GGGTTAGTTGGGGGCTCAAA 59.886 55.000 0.00 0.00 0.00 2.69
4278 7481 2.024751 GGGTTAGTTGGGGGCTCAAATA 60.025 50.000 0.00 0.00 0.00 1.40
4280 7483 4.713824 GTTAGTTGGGGGCTCAAATAAC 57.286 45.455 19.46 19.46 44.78 1.89
4281 7484 2.231716 AGTTGGGGGCTCAAATAACC 57.768 50.000 0.00 0.00 0.00 2.85
4282 7485 1.191535 GTTGGGGGCTCAAATAACCC 58.808 55.000 0.00 0.00 43.44 4.11
4284 7487 3.701800 GGGGGCTCAAATAACCCAA 57.298 52.632 0.00 0.00 46.21 4.12
4285 7488 1.945580 GGGGGCTCAAATAACCCAAA 58.054 50.000 0.00 0.00 46.21 3.28
4286 7489 2.261729 GGGGGCTCAAATAACCCAAAA 58.738 47.619 0.00 0.00 46.21 2.44
4287 7490 2.236146 GGGGGCTCAAATAACCCAAAAG 59.764 50.000 0.00 0.00 46.21 2.27
4288 7491 2.903784 GGGGCTCAAATAACCCAAAAGT 59.096 45.455 0.00 0.00 46.21 2.66
4289 7492 4.090819 GGGGCTCAAATAACCCAAAAGTA 58.909 43.478 0.00 0.00 46.21 2.24
4290 7493 4.714802 GGGGCTCAAATAACCCAAAAGTAT 59.285 41.667 0.00 0.00 46.21 2.12
4291 7494 5.163447 GGGGCTCAAATAACCCAAAAGTATC 60.163 44.000 0.00 0.00 46.21 2.24
4292 7495 5.163447 GGGCTCAAATAACCCAAAAGTATCC 60.163 44.000 0.00 0.00 43.64 2.59
4293 7496 5.420739 GGCTCAAATAACCCAAAAGTATCCA 59.579 40.000 0.00 0.00 0.00 3.41
4294 7497 6.071051 GGCTCAAATAACCCAAAAGTATCCAA 60.071 38.462 0.00 0.00 0.00 3.53
4295 7498 7.382898 GCTCAAATAACCCAAAAGTATCCAAA 58.617 34.615 0.00 0.00 0.00 3.28
4296 7499 7.330946 GCTCAAATAACCCAAAAGTATCCAAAC 59.669 37.037 0.00 0.00 0.00 2.93
4297 7500 8.251383 TCAAATAACCCAAAAGTATCCAAACA 57.749 30.769 0.00 0.00 0.00 2.83
4313 7516 2.833631 AACAGGAACGGTTAGAGTGG 57.166 50.000 0.00 0.00 46.42 4.00
4314 7517 0.974383 ACAGGAACGGTTAGAGTGGG 59.026 55.000 0.00 0.00 27.95 4.61
4315 7518 0.974383 CAGGAACGGTTAGAGTGGGT 59.026 55.000 0.00 0.00 0.00 4.51
4317 7520 2.564062 CAGGAACGGTTAGAGTGGGTTA 59.436 50.000 0.00 0.00 0.00 2.85
4318 7521 2.830321 AGGAACGGTTAGAGTGGGTTAG 59.170 50.000 0.00 0.00 0.00 2.34
4319 7522 2.564504 GGAACGGTTAGAGTGGGTTAGT 59.435 50.000 0.00 0.00 0.00 2.24
4320 7523 3.007290 GGAACGGTTAGAGTGGGTTAGTT 59.993 47.826 0.00 0.00 0.00 2.24
4321 7524 3.949842 ACGGTTAGAGTGGGTTAGTTC 57.050 47.619 0.00 0.00 0.00 3.01
4322 7525 2.564504 ACGGTTAGAGTGGGTTAGTTCC 59.435 50.000 0.00 0.00 0.00 3.62
4323 7526 2.564062 CGGTTAGAGTGGGTTAGTTCCA 59.436 50.000 0.00 0.00 0.00 3.53
4324 7527 3.197116 CGGTTAGAGTGGGTTAGTTCCAT 59.803 47.826 0.00 0.00 36.58 3.41
4325 7528 4.679905 CGGTTAGAGTGGGTTAGTTCCATC 60.680 50.000 0.00 0.00 36.58 3.51
4326 7529 4.470304 GGTTAGAGTGGGTTAGTTCCATCT 59.530 45.833 0.00 0.00 36.58 2.90
4327 7530 5.659971 GGTTAGAGTGGGTTAGTTCCATCTA 59.340 44.000 0.00 0.00 36.58 1.98
4328 7531 6.155737 GGTTAGAGTGGGTTAGTTCCATCTAA 59.844 42.308 0.00 0.00 36.58 2.10
4329 7532 7.147532 GGTTAGAGTGGGTTAGTTCCATCTAAT 60.148 40.741 0.00 0.00 37.11 1.73
4335 7538 6.002653 GGGTTAGTTCCATCTAATCCAACT 57.997 41.667 9.91 0.00 45.46 3.16
4336 7539 7.133133 GGGTTAGTTCCATCTAATCCAACTA 57.867 40.000 9.91 0.00 45.46 2.24
4337 7540 7.746703 GGGTTAGTTCCATCTAATCCAACTAT 58.253 38.462 9.91 0.00 45.46 2.12
4338 7541 7.878644 GGGTTAGTTCCATCTAATCCAACTATC 59.121 40.741 9.91 0.00 45.46 2.08
4339 7542 7.878644 GGTTAGTTCCATCTAATCCAACTATCC 59.121 40.741 0.00 0.00 34.56 2.59
4340 7543 6.441088 AGTTCCATCTAATCCAACTATCCC 57.559 41.667 0.00 0.00 0.00 3.85
4341 7544 5.012148 AGTTCCATCTAATCCAACTATCCCG 59.988 44.000 0.00 0.00 0.00 5.14
4342 7545 3.838317 TCCATCTAATCCAACTATCCCGG 59.162 47.826 0.00 0.00 0.00 5.73
4343 7546 3.583086 CCATCTAATCCAACTATCCCGGT 59.417 47.826 0.00 0.00 0.00 5.28
4344 7547 4.563580 CCATCTAATCCAACTATCCCGGTG 60.564 50.000 0.00 0.00 0.00 4.94
4345 7548 2.969950 TCTAATCCAACTATCCCGGTGG 59.030 50.000 0.00 0.00 0.00 4.61
4348 7551 0.337082 TCCAACTATCCCGGTGGAGA 59.663 55.000 5.15 0.00 46.08 3.71
4352 7555 2.431023 CTATCCCGGTGGAGAGGTG 58.569 63.158 0.00 0.00 44.71 4.00
4353 7556 1.749334 CTATCCCGGTGGAGAGGTGC 61.749 65.000 0.00 0.00 44.71 5.01
4354 7557 2.238319 TATCCCGGTGGAGAGGTGCT 62.238 60.000 0.00 0.00 46.08 4.40
4355 7558 3.322466 CCCGGTGGAGAGGTGCTT 61.322 66.667 0.00 0.00 0.00 3.91
4356 7559 2.750350 CCGGTGGAGAGGTGCTTT 59.250 61.111 0.00 0.00 0.00 3.51
4357 7560 1.073199 CCGGTGGAGAGGTGCTTTT 59.927 57.895 0.00 0.00 0.00 2.27
4415 7618 8.690680 CTCTAACTGTGTTAGAGTATCCAAAC 57.309 38.462 26.67 0.00 41.73 2.93
4416 7619 8.185506 TCTAACTGTGTTAGAGTATCCAAACA 57.814 34.615 14.02 0.00 38.63 2.83
4417 7620 8.304596 TCTAACTGTGTTAGAGTATCCAAACAG 58.695 37.037 14.02 0.00 40.68 3.16
4418 7621 5.794894 ACTGTGTTAGAGTATCCAAACAGG 58.205 41.667 0.00 0.00 40.68 4.00
4419 7622 5.160607 TGTGTTAGAGTATCCAAACAGGG 57.839 43.478 0.00 0.00 40.68 4.45
4420 7623 3.939592 GTGTTAGAGTATCCAAACAGGGC 59.060 47.826 0.00 0.00 40.68 5.19
4421 7624 3.585289 TGTTAGAGTATCCAAACAGGGCA 59.415 43.478 0.00 0.00 36.81 5.36
4456 7668 2.139917 CACCGCAGCAGTAACAAAGTA 58.860 47.619 0.00 0.00 0.00 2.24
4466 7678 4.451435 GCAGTAACAAAGTAGAGGAACCAC 59.549 45.833 0.00 0.00 0.00 4.16
4490 7710 3.134804 GGTACATACAAGGCAGATCCACT 59.865 47.826 0.00 0.00 37.29 4.00
4503 7723 4.759782 CAGATCCACTAAACTACCCACAG 58.240 47.826 0.00 0.00 0.00 3.66
4545 7765 6.204359 CAAACATGCCAAGTTATCAGCTATC 58.796 40.000 0.00 0.00 0.00 2.08
4547 7767 4.103785 ACATGCCAAGTTATCAGCTATCCT 59.896 41.667 0.00 0.00 0.00 3.24
4548 7768 4.778213 TGCCAAGTTATCAGCTATCCTT 57.222 40.909 0.00 0.00 0.00 3.36
4550 7770 5.509498 TGCCAAGTTATCAGCTATCCTTTT 58.491 37.500 0.00 0.00 0.00 2.27
4551 7771 5.590259 TGCCAAGTTATCAGCTATCCTTTTC 59.410 40.000 0.00 0.00 0.00 2.29
4554 7774 6.261826 CCAAGTTATCAGCTATCCTTTTCCTG 59.738 42.308 0.00 0.00 0.00 3.86
4555 7775 6.814954 AGTTATCAGCTATCCTTTTCCTGA 57.185 37.500 0.00 0.00 37.01 3.86
4588 7808 3.672293 CTGCAAATCAGGTGCCGT 58.328 55.556 0.00 0.00 41.49 5.68
4589 7809 1.959085 CTGCAAATCAGGTGCCGTT 59.041 52.632 0.00 0.00 41.49 4.44
4590 7810 0.109597 CTGCAAATCAGGTGCCGTTC 60.110 55.000 0.00 0.00 41.49 3.95
4591 7811 1.154225 GCAAATCAGGTGCCGTTCG 60.154 57.895 0.00 0.00 35.91 3.95
4592 7812 1.573829 GCAAATCAGGTGCCGTTCGA 61.574 55.000 0.00 0.00 35.91 3.71
4593 7813 0.443869 CAAATCAGGTGCCGTTCGAG 59.556 55.000 0.00 0.00 0.00 4.04
4595 7815 0.034896 AATCAGGTGCCGTTCGAGTT 59.965 50.000 0.00 0.00 0.00 3.01
4596 7816 0.034896 ATCAGGTGCCGTTCGAGTTT 59.965 50.000 0.00 0.00 0.00 2.66
4597 7817 0.878523 TCAGGTGCCGTTCGAGTTTG 60.879 55.000 0.00 0.00 0.00 2.93
4598 7818 1.597027 AGGTGCCGTTCGAGTTTGG 60.597 57.895 0.00 0.00 0.00 3.28
4599 7819 2.613506 GGTGCCGTTCGAGTTTGGG 61.614 63.158 0.00 0.00 0.00 4.12
4600 7820 1.890510 GTGCCGTTCGAGTTTGGGT 60.891 57.895 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 113 3.055240 CCAAGCCAATTTTTGCCTGGATA 60.055 43.478 0.00 0.00 0.00 2.59
121 126 6.400568 CAACTAAACATGAATCCAAGCCAAT 58.599 36.000 0.00 0.00 0.00 3.16
133 138 4.887071 ACTTTCCTGTGCAACTAAACATGA 59.113 37.500 0.00 0.00 38.04 3.07
293 298 1.682323 GGTAACTTCCCTCTAGCCTCG 59.318 57.143 0.00 0.00 0.00 4.63
450 455 2.556622 GGTCGCCCTTTTGATTCTTCAA 59.443 45.455 0.00 0.00 40.09 2.69
453 458 1.545841 GGGTCGCCCTTTTGATTCTT 58.454 50.000 7.58 0.00 41.34 2.52
480 485 2.032681 GCTCGCCCACACTTCCTT 59.967 61.111 0.00 0.00 0.00 3.36
503 508 3.727258 CATCCCCACGCCTCCCAA 61.727 66.667 0.00 0.00 0.00 4.12
714 725 4.847444 GCCGCAGCTTCCTCCTCC 62.847 72.222 0.00 0.00 35.50 4.30
732 743 4.493747 CTTCGTCCCTCGCCGACC 62.494 72.222 0.00 0.00 39.67 4.79
745 758 1.068417 TGTTCCACGGTCCACTTCG 59.932 57.895 0.00 0.00 0.00 3.79
832 846 8.223100 GCGCAAAGATTTGATTTTTATTTCACT 58.777 29.630 0.30 0.00 40.55 3.41
833 847 7.478355 GGCGCAAAGATTTGATTTTTATTTCAC 59.522 33.333 10.83 0.00 40.55 3.18
834 848 7.517321 GGCGCAAAGATTTGATTTTTATTTCA 58.483 30.769 10.83 0.00 40.55 2.69
835 849 6.678245 CGGCGCAAAGATTTGATTTTTATTTC 59.322 34.615 10.83 0.00 40.55 2.17
836 850 6.367422 TCGGCGCAAAGATTTGATTTTTATTT 59.633 30.769 10.83 0.00 40.55 1.40
926 968 0.319555 TTTGCTTGTCGACGAGGGAG 60.320 55.000 29.62 14.52 0.00 4.30
929 971 1.901650 GCCTTTGCTTGTCGACGAGG 61.902 60.000 29.62 17.20 33.53 4.63
930 972 1.493311 GCCTTTGCTTGTCGACGAG 59.507 57.895 25.82 25.82 33.53 4.18
931 973 1.959226 GGCCTTTGCTTGTCGACGA 60.959 57.895 11.62 8.40 37.74 4.20
932 974 2.250939 TGGCCTTTGCTTGTCGACG 61.251 57.895 11.62 0.00 37.74 5.12
933 975 1.282875 GTGGCCTTTGCTTGTCGAC 59.717 57.895 9.11 9.11 37.74 4.20
934 976 1.896660 GGTGGCCTTTGCTTGTCGA 60.897 57.895 3.32 0.00 37.74 4.20
935 977 2.644992 GGTGGCCTTTGCTTGTCG 59.355 61.111 3.32 0.00 37.74 4.35
994 1051 2.193248 GGAGGGAAATGCGGAGGG 59.807 66.667 0.00 0.00 0.00 4.30
1051 1135 1.971505 ATCAAATCGCGCAGGGGAGA 61.972 55.000 8.75 0.00 42.39 3.71
1083 1170 1.730851 AAAGAAACTCCCCTCCTCGT 58.269 50.000 0.00 0.00 0.00 4.18
1094 1186 3.739209 GCAAGCAAGCAGGAAAAGAAACT 60.739 43.478 0.00 0.00 0.00 2.66
1108 1200 1.574134 CAACCAACCAAGCAAGCAAG 58.426 50.000 0.00 0.00 0.00 4.01
1112 1204 1.950630 GCGCAACCAACCAAGCAAG 60.951 57.895 0.30 0.00 0.00 4.01
1116 1208 3.536498 GACCGCGCAACCAACCAAG 62.536 63.158 8.75 0.00 0.00 3.61
1277 1369 4.475135 GGAAGTCCTCCTGGCCGC 62.475 72.222 0.00 0.00 41.61 6.53
1354 1446 2.661718 GAGAGAGGGAGAGGTTACCTG 58.338 57.143 9.39 0.00 34.02 4.00
1387 1483 4.279671 CACCAACTATGCCAAACCAAAGTA 59.720 41.667 0.00 0.00 0.00 2.24
1388 1484 3.069443 CACCAACTATGCCAAACCAAAGT 59.931 43.478 0.00 0.00 0.00 2.66
1389 1485 3.320541 TCACCAACTATGCCAAACCAAAG 59.679 43.478 0.00 0.00 0.00 2.77
1391 1487 2.625790 GTCACCAACTATGCCAAACCAA 59.374 45.455 0.00 0.00 0.00 3.67
1394 1490 2.147958 TCGTCACCAACTATGCCAAAC 58.852 47.619 0.00 0.00 0.00 2.93
1396 1492 1.943968 GCTCGTCACCAACTATGCCAA 60.944 52.381 0.00 0.00 0.00 4.52
1398 1494 0.108138 AGCTCGTCACCAACTATGCC 60.108 55.000 0.00 0.00 0.00 4.40
1400 1496 1.002366 GCAGCTCGTCACCAACTATG 58.998 55.000 0.00 0.00 0.00 2.23
1401 1497 0.608130 TGCAGCTCGTCACCAACTAT 59.392 50.000 0.00 0.00 0.00 2.12
1403 1499 0.952497 CATGCAGCTCGTCACCAACT 60.952 55.000 0.00 0.00 0.00 3.16
1404 1500 1.230635 ACATGCAGCTCGTCACCAAC 61.231 55.000 0.00 0.00 0.00 3.77
1411 1524 1.726791 CGTTTTCTACATGCAGCTCGT 59.273 47.619 0.00 0.00 0.00 4.18
1412 1525 1.061131 CCGTTTTCTACATGCAGCTCG 59.939 52.381 0.00 0.00 0.00 5.03
1421 1534 3.070446 ACAGATCACCACCGTTTTCTACA 59.930 43.478 0.00 0.00 0.00 2.74
1422 1535 3.432252 CACAGATCACCACCGTTTTCTAC 59.568 47.826 0.00 0.00 0.00 2.59
1429 1542 2.048222 CGCACAGATCACCACCGT 60.048 61.111 0.00 0.00 0.00 4.83
1454 1570 0.034767 TCCTGCCCATTCAGCAAGAG 60.035 55.000 0.00 0.00 40.35 2.85
1468 1584 4.153117 CCTTGATAATAGCATCGTTCCTGC 59.847 45.833 0.00 0.00 39.97 4.85
1469 1585 5.541845 TCCTTGATAATAGCATCGTTCCTG 58.458 41.667 0.00 0.00 0.00 3.86
1507 1631 8.986477 ACACAAAACTGCATATCCTAATTTTC 57.014 30.769 0.00 0.00 0.00 2.29
1509 1633 7.397192 AGGACACAAAACTGCATATCCTAATTT 59.603 33.333 0.00 0.00 33.53 1.82
1510 1634 6.891908 AGGACACAAAACTGCATATCCTAATT 59.108 34.615 0.00 0.00 33.53 1.40
1511 1635 6.319658 CAGGACACAAAACTGCATATCCTAAT 59.680 38.462 0.00 0.00 33.53 1.73
1512 1636 5.647658 CAGGACACAAAACTGCATATCCTAA 59.352 40.000 0.00 0.00 33.53 2.69
1513 1637 5.045942 TCAGGACACAAAACTGCATATCCTA 60.046 40.000 0.00 0.00 33.53 2.94
1518 1642 3.411446 CCTCAGGACACAAAACTGCATA 58.589 45.455 0.00 0.00 32.42 3.14
1521 1645 0.312102 GCCTCAGGACACAAAACTGC 59.688 55.000 0.00 0.00 32.42 4.40
1522 1646 0.954452 GGCCTCAGGACACAAAACTG 59.046 55.000 0.00 0.00 0.00 3.16
1523 1647 0.550914 TGGCCTCAGGACACAAAACT 59.449 50.000 0.00 0.00 34.69 2.66
1525 1649 0.550914 ACTGGCCTCAGGACACAAAA 59.449 50.000 0.00 0.00 44.99 2.44
1545 1669 2.223688 TGTTGTGCACAATTACAGCCAC 60.224 45.455 33.16 18.86 38.24 5.01
1548 1672 3.624326 TCTGTTGTGCACAATTACAGC 57.376 42.857 31.73 21.32 38.24 4.40
1549 1673 5.207768 GTCTTCTGTTGTGCACAATTACAG 58.792 41.667 31.13 31.13 38.24 2.74
1550 1674 4.637977 TGTCTTCTGTTGTGCACAATTACA 59.362 37.500 33.16 25.49 38.24 2.41
1551 1675 5.168526 TGTCTTCTGTTGTGCACAATTAC 57.831 39.130 33.16 22.40 38.24 1.89
1552 1676 4.261155 GCTGTCTTCTGTTGTGCACAATTA 60.261 41.667 33.16 23.40 38.24 1.40
1553 1677 3.489738 GCTGTCTTCTGTTGTGCACAATT 60.490 43.478 33.16 0.00 38.24 2.32
1554 1678 2.033801 GCTGTCTTCTGTTGTGCACAAT 59.966 45.455 33.16 0.00 38.24 2.71
1556 1680 1.016627 GCTGTCTTCTGTTGTGCACA 58.983 50.000 17.42 17.42 0.00 4.57
1557 1681 1.016627 TGCTGTCTTCTGTTGTGCAC 58.983 50.000 10.75 10.75 0.00 4.57
1558 1682 1.016627 GTGCTGTCTTCTGTTGTGCA 58.983 50.000 0.00 0.00 0.00 4.57
1559 1683 1.303309 AGTGCTGTCTTCTGTTGTGC 58.697 50.000 0.00 0.00 0.00 4.57
1560 1684 2.679837 ACAAGTGCTGTCTTCTGTTGTG 59.320 45.455 0.00 0.00 29.87 3.33
1573 1697 0.107017 AGTGGTGCAAGACAAGTGCT 60.107 50.000 0.00 0.00 42.69 4.40
1574 1698 0.740737 AAGTGGTGCAAGACAAGTGC 59.259 50.000 0.00 0.00 42.55 4.40
1575 1699 1.334869 GGAAGTGGTGCAAGACAAGTG 59.665 52.381 0.00 0.00 0.00 3.16
1576 1700 1.064758 TGGAAGTGGTGCAAGACAAGT 60.065 47.619 0.00 0.00 0.00 3.16
1579 1703 3.892633 TTGGAAGTGGTGCAAGACA 57.107 47.368 0.00 0.00 31.74 3.41
1595 1787 1.148310 CGTAGTTCACAGGGCACTTG 58.852 55.000 0.00 0.00 0.00 3.16
1598 1790 1.004918 AGCGTAGTTCACAGGGCAC 60.005 57.895 0.00 0.00 0.00 5.01
1600 1792 0.602905 AACAGCGTAGTTCACAGGGC 60.603 55.000 0.00 0.00 0.00 5.19
1628 1827 2.106477 TTGCAGGATTACATGACGCA 57.894 45.000 0.00 0.00 0.00 5.24
1630 1829 6.540205 CATCATATTGCAGGATTACATGACG 58.460 40.000 0.00 0.00 0.00 4.35
1633 1832 5.122711 TCGCATCATATTGCAGGATTACATG 59.877 40.000 0.60 0.00 42.91 3.21
1637 1836 5.764686 AGTTTCGCATCATATTGCAGGATTA 59.235 36.000 0.60 0.00 42.91 1.75
1677 1894 2.942376 ACAGAAATGTTTCAGCACGACA 59.058 40.909 8.09 0.00 39.61 4.35
1682 1899 5.840715 TGCAAATACAGAAATGTTTCAGCA 58.159 33.333 8.09 0.00 39.61 4.41
1685 1902 6.704937 TGCAATGCAAATACAGAAATGTTTCA 59.295 30.769 5.01 0.00 36.16 2.69
1717 1934 2.829043 TTCGGACGGATCTTGCCACG 62.829 60.000 0.00 0.00 0.00 4.94
1721 1938 1.594862 CAAGATTCGGACGGATCTTGC 59.405 52.381 31.18 2.64 42.04 4.01
1725 1942 0.880718 GGGCAAGATTCGGACGGATC 60.881 60.000 4.85 4.85 0.00 3.36
1730 1947 1.463674 AACATGGGCAAGATTCGGAC 58.536 50.000 0.00 0.00 0.00 4.79
1731 1948 2.214376 AAACATGGGCAAGATTCGGA 57.786 45.000 0.00 0.00 0.00 4.55
1732 1949 2.493278 AGAAAACATGGGCAAGATTCGG 59.507 45.455 0.00 0.00 0.00 4.30
1733 1950 3.441572 AGAGAAAACATGGGCAAGATTCG 59.558 43.478 0.00 0.00 0.00 3.34
1734 1951 4.381292 CCAGAGAAAACATGGGCAAGATTC 60.381 45.833 0.00 0.00 0.00 2.52
1741 1958 3.129287 CACATACCAGAGAAAACATGGGC 59.871 47.826 0.00 0.00 38.48 5.36
1788 2005 2.414559 CGGCACAAGATTAAAGGCTGTG 60.415 50.000 0.00 0.00 0.00 3.66
1789 2006 1.812571 CGGCACAAGATTAAAGGCTGT 59.187 47.619 0.00 0.00 0.00 4.40
1791 2008 0.811281 GCGGCACAAGATTAAAGGCT 59.189 50.000 0.00 0.00 0.00 4.58
1804 2021 1.291132 GGATTACTCTGAAGCGGCAC 58.709 55.000 1.45 0.00 0.00 5.01
1805 2022 0.179111 CGGATTACTCTGAAGCGGCA 60.179 55.000 1.45 0.00 0.00 5.69
1806 2023 0.179108 ACGGATTACTCTGAAGCGGC 60.179 55.000 0.00 0.00 0.00 6.53
1815 2032 1.281899 GCACAGCTCACGGATTACTC 58.718 55.000 0.00 0.00 0.00 2.59
1817 2034 1.999051 CGCACAGCTCACGGATTAC 59.001 57.895 0.00 0.00 0.00 1.89
1818 2035 1.809619 GCGCACAGCTCACGGATTA 60.810 57.895 0.30 0.00 44.04 1.75
1819 2036 3.121030 GCGCACAGCTCACGGATT 61.121 61.111 0.30 0.00 44.04 3.01
1831 2050 0.940126 CCCATGACTATGAAGCGCAC 59.060 55.000 11.47 3.52 36.36 5.34
1835 2054 1.802960 CATCGCCCATGACTATGAAGC 59.197 52.381 0.00 0.00 36.36 3.86
1839 2058 3.935203 GGATTACATCGCCCATGACTATG 59.065 47.826 0.00 0.00 36.21 2.23
1840 2059 3.840666 AGGATTACATCGCCCATGACTAT 59.159 43.478 0.00 0.00 36.21 2.12
1847 2066 1.419381 TAGCAGGATTACATCGCCCA 58.581 50.000 0.00 0.00 0.00 5.36
1848 2067 2.350522 CATAGCAGGATTACATCGCCC 58.649 52.381 0.00 0.00 0.00 6.13
1864 2083 1.324383 TGCTTGCATCATGCCCATAG 58.676 50.000 7.30 0.55 44.23 2.23
1887 2106 2.132762 GTGATGTCGAAACTCGGTGTT 58.867 47.619 0.00 0.00 40.88 3.32
1889 2108 0.708370 CGTGATGTCGAAACTCGGTG 59.292 55.000 0.00 0.00 40.88 4.94
1890 2109 1.007336 GCGTGATGTCGAAACTCGGT 61.007 55.000 0.00 0.00 40.88 4.69
1891 2110 1.702299 GCGTGATGTCGAAACTCGG 59.298 57.895 0.00 0.00 40.88 4.63
1892 2111 1.334992 ACGCGTGATGTCGAAACTCG 61.335 55.000 12.93 0.00 42.10 4.18
1927 2148 0.836400 TGTCACTCCTCCCAGGAACC 60.836 60.000 0.00 0.00 45.28 3.62
1932 2153 0.829333 CATCCTGTCACTCCTCCCAG 59.171 60.000 0.00 0.00 0.00 4.45
1986 2207 3.297736 ACAGGGACTAATAGGACTTCCG 58.702 50.000 0.00 0.00 37.99 4.30
1999 2220 5.895534 TCGAACCAAATATACTACAGGGACT 59.104 40.000 0.00 0.00 43.88 3.85
2005 2226 7.604549 TGACAACTCGAACCAAATATACTACA 58.395 34.615 0.00 0.00 0.00 2.74
2011 2232 8.506168 ACATAATGACAACTCGAACCAAATAT 57.494 30.769 0.00 0.00 0.00 1.28
2021 2242 3.525537 AGGCAGACATAATGACAACTCG 58.474 45.455 0.00 0.00 0.00 4.18
2029 2250 7.254590 GCTGTACTTTAAGAGGCAGACATAATG 60.255 40.741 14.82 0.00 35.71 1.90
2036 2257 3.578716 ACAGCTGTACTTTAAGAGGCAGA 59.421 43.478 20.16 0.00 35.71 4.26
2054 2278 2.071540 GGTAACCAAAGTCGGTACAGC 58.928 52.381 0.00 0.00 38.76 4.40
2055 2279 3.389925 TGGTAACCAAAGTCGGTACAG 57.610 47.619 0.00 0.00 38.76 2.74
2064 2288 7.687941 AGTGATCTTAACATGGTAACCAAAG 57.312 36.000 0.00 0.00 36.95 2.77
2085 2309 6.287107 AGATCTACACGACAAAACAAAGTG 57.713 37.500 0.00 0.00 38.63 3.16
2091 2315 3.607209 GTCCGAGATCTACACGACAAAAC 59.393 47.826 0.00 0.00 34.75 2.43
2095 2319 2.103537 TGTCCGAGATCTACACGACA 57.896 50.000 0.00 2.43 34.75 4.35
2096 2320 3.694535 AATGTCCGAGATCTACACGAC 57.305 47.619 0.00 0.00 34.75 4.34
2097 2321 5.121105 TCTTAATGTCCGAGATCTACACGA 58.879 41.667 0.00 0.00 34.75 4.35
2098 2322 5.419760 TCTTAATGTCCGAGATCTACACG 57.580 43.478 0.00 0.00 0.00 4.49
2134 2358 2.398252 ACATCTGGCTGTCAGTCATG 57.602 50.000 7.78 7.05 43.76 3.07
2135 2359 3.743584 GCATACATCTGGCTGTCAGTCAT 60.744 47.826 7.78 0.00 43.76 3.06
2158 2382 1.202336 GGTATGAGCAATGCCTTGTGC 60.202 52.381 0.00 0.00 38.01 4.57
2235 2459 7.595819 ACATGAGGAAATGTTTACCTTTTCA 57.404 32.000 0.00 0.00 37.50 2.69
2270 2495 8.848474 TGGAAGAAAAATAACCAAAAACACAA 57.152 26.923 0.00 0.00 0.00 3.33
2346 2573 7.765307 AGAATTCAGGTTGCAGTTAATATGTG 58.235 34.615 8.44 0.00 0.00 3.21
2353 2580 5.592282 TCAACAAGAATTCAGGTTGCAGTTA 59.408 36.000 25.46 13.21 40.20 2.24
2366 2596 9.612620 CTTAGAAAATAAGCGTCAACAAGAATT 57.387 29.630 0.00 0.00 0.00 2.17
2367 2597 8.237267 CCTTAGAAAATAAGCGTCAACAAGAAT 58.763 33.333 0.00 0.00 0.00 2.40
2382 2612 8.579006 TCGACAGTAGTTTGACCTTAGAAAATA 58.421 33.333 0.00 0.00 0.00 1.40
2393 2623 5.290158 TGTCTTTGTTCGACAGTAGTTTGAC 59.710 40.000 0.00 0.00 36.54 3.18
2407 2637 7.196331 ACTGCTAAAATGAGTTGTCTTTGTTC 58.804 34.615 0.00 0.00 0.00 3.18
2408 2638 7.100458 ACTGCTAAAATGAGTTGTCTTTGTT 57.900 32.000 0.00 0.00 0.00 2.83
2410 2640 7.195646 TGAACTGCTAAAATGAGTTGTCTTTG 58.804 34.615 0.00 0.00 30.01 2.77
2416 2646 9.630098 AACATTATGAACTGCTAAAATGAGTTG 57.370 29.630 0.00 0.00 30.01 3.16
2451 2681 2.781174 AGTAAGAAACACTGGACCCCAA 59.219 45.455 0.00 0.00 30.80 4.12
2455 2685 3.251004 CAGCAAGTAAGAAACACTGGACC 59.749 47.826 0.00 0.00 0.00 4.46
2494 2741 6.909550 ACTTAAATAGTCAAAATGTGGGCA 57.090 33.333 0.00 0.00 28.23 5.36
2495 2742 6.589907 CCAACTTAAATAGTCAAAATGTGGGC 59.410 38.462 0.00 0.00 35.54 5.36
2529 2776 9.101655 GGTACGAAAGAACAAAGGCTAATATAA 57.898 33.333 0.00 0.00 0.00 0.98
2532 2787 6.465948 TGGTACGAAAGAACAAAGGCTAATA 58.534 36.000 0.00 0.00 0.00 0.98
2551 2806 4.770795 ACAGCATTAGGAATGTCTGGTAC 58.229 43.478 18.86 0.00 42.27 3.34
2563 2818 8.443937 GTTCTTAAGTTCAACTACAGCATTAGG 58.556 37.037 1.63 0.00 0.00 2.69
2564 2819 8.988934 TGTTCTTAAGTTCAACTACAGCATTAG 58.011 33.333 1.63 0.00 0.00 1.73
2569 2824 5.049612 GGGTGTTCTTAAGTTCAACTACAGC 60.050 44.000 10.02 10.02 33.41 4.40
2575 2830 6.512903 GCTTAGTGGGTGTTCTTAAGTTCAAC 60.513 42.308 1.63 5.85 0.00 3.18
2694 2960 2.683859 GCAAGCGATGACTGCTGCA 61.684 57.895 0.88 0.88 43.14 4.41
2891 3157 0.039165 CCGTCTTGCTTTTCCTTGGC 60.039 55.000 0.00 0.00 0.00 4.52
2938 3204 3.598715 TCGTCGTTGGTGTCGGCT 61.599 61.111 0.00 0.00 0.00 5.52
2941 3207 1.728426 GAGGTCGTCGTTGGTGTCG 60.728 63.158 0.00 0.00 0.00 4.35
3151 3417 4.489771 GACCACATGGAGCCCCCG 62.490 72.222 4.53 0.00 38.94 5.73
3241 3507 3.880846 GCTTTCATCCTGCGGCCG 61.881 66.667 24.05 24.05 0.00 6.13
3274 3540 2.173669 CGCCGGCACATAGACCAAG 61.174 63.158 28.98 0.37 0.00 3.61
3277 3543 4.830765 TGCGCCGGCACATAGACC 62.831 66.667 28.98 3.90 46.21 3.85
3302 3568 3.123621 GCAGAACGGTCACACAAATAGAG 59.876 47.826 1.87 0.00 0.00 2.43
3306 3572 1.603802 CAGCAGAACGGTCACACAAAT 59.396 47.619 1.87 0.00 0.00 2.32
3348 3618 1.400846 CAACTCAGCTCACATGGATGC 59.599 52.381 0.00 0.00 0.00 3.91
3389 3666 1.588082 CATGCCTGTCCAACCAAGC 59.412 57.895 0.00 0.00 0.00 4.01
3408 3685 4.590850 AAGGATTGAGGTTGCAGAAAAC 57.409 40.909 0.00 0.00 0.00 2.43
3477 3761 3.696051 GGGTGATGCAACTACAATGTCAT 59.304 43.478 0.00 0.00 0.00 3.06
3478 3762 3.081061 GGGTGATGCAACTACAATGTCA 58.919 45.455 0.00 0.00 0.00 3.58
3502 3786 3.571401 AGATGCCACTTCAGAAAAACAGG 59.429 43.478 0.00 0.00 0.00 4.00
3622 3914 7.409697 CCTAAATACAAAGATCACACCGAATG 58.590 38.462 0.00 0.00 0.00 2.67
3630 3922 6.374333 TGCACTTCCCTAAATACAAAGATCAC 59.626 38.462 0.00 0.00 0.00 3.06
3636 3928 7.172361 GCATTTTTGCACTTCCCTAAATACAAA 59.828 33.333 0.00 0.00 34.41 2.83
3665 3960 9.093970 CATATGTACAGGAAAATAAACGAGTGA 57.906 33.333 0.33 0.00 0.00 3.41
3699 3994 1.734477 CAGCCACGTCGACTCAAGG 60.734 63.158 14.70 10.61 0.00 3.61
3785 4081 4.787598 CATTGAACAAAGTCTCGGAAAGG 58.212 43.478 0.00 0.00 0.00 3.11
3799 4096 6.430925 GGCATAATATGTAGAGGCATTGAACA 59.569 38.462 1.92 0.00 0.00 3.18
3805 4102 6.354938 CATCAGGCATAATATGTAGAGGCAT 58.645 40.000 1.92 0.00 0.00 4.40
3879 4298 4.421033 TCTACTGTGTAGCGAAAGTCTG 57.579 45.455 0.00 0.00 0.00 3.51
3888 4307 5.399604 ACGTTTTGTTTCTACTGTGTAGC 57.600 39.130 0.26 0.00 0.00 3.58
3912 4342 2.159198 AGTTTTCAGCCTGCAAACACTG 60.159 45.455 19.53 0.00 36.26 3.66
3913 4343 2.099756 GAGTTTTCAGCCTGCAAACACT 59.900 45.455 19.53 4.06 36.26 3.55
3952 4382 1.454111 TTCACCACACCAAACGGGG 60.454 57.895 0.00 0.00 42.91 5.73
3960 4390 2.736144 TACGATGAGTTCACCACACC 57.264 50.000 0.00 0.00 0.00 4.16
3962 4392 6.509656 GGTATAATACGATGAGTTCACCACA 58.490 40.000 0.00 0.00 0.00 4.17
3963 4393 5.628193 CGGTATAATACGATGAGTTCACCAC 59.372 44.000 0.00 0.00 0.00 4.16
3995 4684 7.547697 TTCCCCGTACTGAATATATTGATGA 57.452 36.000 1.78 0.00 0.00 2.92
4014 4703 1.866853 CTTCGTGCTGCCTTTTCCCC 61.867 60.000 0.00 0.00 0.00 4.81
4018 4707 2.024414 AGAAACTTCGTGCTGCCTTTT 58.976 42.857 0.00 0.00 0.00 2.27
4020 4709 1.334869 CAAGAAACTTCGTGCTGCCTT 59.665 47.619 0.00 0.00 30.48 4.35
4030 4721 8.687824 TGAAAGAAACACAATCAAGAAACTTC 57.312 30.769 0.00 0.00 0.00 3.01
4032 4723 8.253113 ACATGAAAGAAACACAATCAAGAAACT 58.747 29.630 0.00 0.00 0.00 2.66
4046 4737 3.242712 CCGTGTTGCAACATGAAAGAAAC 59.757 43.478 40.40 22.35 46.34 2.78
4051 4742 0.387202 CCCCGTGTTGCAACATGAAA 59.613 50.000 40.40 16.73 46.34 2.69
4052 4743 0.466372 TCCCCGTGTTGCAACATGAA 60.466 50.000 40.40 26.69 46.34 2.57
4054 4745 0.387202 TTTCCCCGTGTTGCAACATG 59.613 50.000 34.90 34.90 43.77 3.21
4055 4746 1.068434 CTTTTCCCCGTGTTGCAACAT 59.932 47.619 33.16 0.00 41.59 2.71
4057 4748 0.249280 CCTTTTCCCCGTGTTGCAAC 60.249 55.000 22.83 22.83 0.00 4.17
4059 4750 2.494530 GCCTTTTCCCCGTGTTGCA 61.495 57.895 0.00 0.00 0.00 4.08
4060 4751 2.338620 GCCTTTTCCCCGTGTTGC 59.661 61.111 0.00 0.00 0.00 4.17
4061 4752 1.659794 CTGCCTTTTCCCCGTGTTG 59.340 57.895 0.00 0.00 0.00 3.33
4062 4753 1.530655 CCTGCCTTTTCCCCGTGTT 60.531 57.895 0.00 0.00 0.00 3.32
4064 4755 0.825840 TTTCCTGCCTTTTCCCCGTG 60.826 55.000 0.00 0.00 0.00 4.94
4065 4756 0.114364 ATTTCCTGCCTTTTCCCCGT 59.886 50.000 0.00 0.00 0.00 5.28
4066 4757 1.204704 GAATTTCCTGCCTTTTCCCCG 59.795 52.381 0.00 0.00 0.00 5.73
4075 5790 4.790765 AGCAAAAGTAGAATTTCCTGCC 57.209 40.909 0.00 0.00 29.88 4.85
4119 7194 1.134907 TCGAAATGCCGGTAGTTCTCC 60.135 52.381 26.19 5.61 0.00 3.71
4122 7197 2.676342 ACAATCGAAATGCCGGTAGTTC 59.324 45.455 20.85 20.85 0.00 3.01
4127 7202 2.357637 CCAATACAATCGAAATGCCGGT 59.642 45.455 1.90 0.00 0.00 5.28
4129 7204 3.691049 ACCAATACAATCGAAATGCCG 57.309 42.857 0.00 0.00 0.00 5.69
4144 7219 2.151202 CAGAACCGCTGTTGTACCAAT 58.849 47.619 0.00 0.00 39.85 3.16
4176 7378 6.763355 ACACACTCTGAACTGAATTGAGTAT 58.237 36.000 0.00 0.00 36.39 2.12
4177 7379 6.161855 ACACACTCTGAACTGAATTGAGTA 57.838 37.500 0.00 0.00 36.39 2.59
4178 7380 5.028549 ACACACTCTGAACTGAATTGAGT 57.971 39.130 0.00 0.00 38.36 3.41
4180 7382 5.022282 TGACACACTCTGAACTGAATTGA 57.978 39.130 0.00 0.00 0.00 2.57
4181 7383 5.065090 TGTTGACACACTCTGAACTGAATTG 59.935 40.000 0.00 0.00 0.00 2.32
4183 7385 4.769688 TGTTGACACACTCTGAACTGAAT 58.230 39.130 0.00 0.00 0.00 2.57
4201 7404 4.794169 CCGGGTTAGATTTTGTTCTGTTG 58.206 43.478 0.00 0.00 0.00 3.33
4216 7419 1.502527 ATCCAAACAGGGCCGGGTTA 61.503 55.000 6.65 0.00 38.24 2.85
4222 7425 0.826062 CCATTGATCCAAACAGGGCC 59.174 55.000 0.00 0.00 38.24 5.80
4225 7428 2.236489 ACCCCATTGATCCAAACAGG 57.764 50.000 0.00 0.00 39.47 4.00
4226 7429 4.599041 TCTAACCCCATTGATCCAAACAG 58.401 43.478 0.00 0.00 0.00 3.16
4229 7432 3.269381 AGCTCTAACCCCATTGATCCAAA 59.731 43.478 0.00 0.00 0.00 3.28
4231 7434 2.492025 AGCTCTAACCCCATTGATCCA 58.508 47.619 0.00 0.00 0.00 3.41
4233 7436 4.965200 ACTAGCTCTAACCCCATTGATC 57.035 45.455 0.00 0.00 0.00 2.92
4235 7438 4.324254 CCAAACTAGCTCTAACCCCATTGA 60.324 45.833 0.00 0.00 0.00 2.57
4237 7440 3.053619 CCCAAACTAGCTCTAACCCCATT 60.054 47.826 0.00 0.00 0.00 3.16
4238 7441 2.509964 CCCAAACTAGCTCTAACCCCAT 59.490 50.000 0.00 0.00 0.00 4.00
4239 7442 1.913419 CCCAAACTAGCTCTAACCCCA 59.087 52.381 0.00 0.00 0.00 4.96
4240 7443 1.914108 ACCCAAACTAGCTCTAACCCC 59.086 52.381 0.00 0.00 0.00 4.95
4241 7444 3.715638 AACCCAAACTAGCTCTAACCC 57.284 47.619 0.00 0.00 0.00 4.11
4243 7446 5.642491 CCAACTAACCCAAACTAGCTCTAAC 59.358 44.000 0.00 0.00 0.00 2.34
4245 7448 4.224370 CCCAACTAACCCAAACTAGCTCTA 59.776 45.833 0.00 0.00 0.00 2.43
4247 7450 3.344515 CCCAACTAACCCAAACTAGCTC 58.655 50.000 0.00 0.00 0.00 4.09
4248 7451 2.041216 CCCCAACTAACCCAAACTAGCT 59.959 50.000 0.00 0.00 0.00 3.32
4249 7452 2.443416 CCCCAACTAACCCAAACTAGC 58.557 52.381 0.00 0.00 0.00 3.42
4251 7454 1.075861 GCCCCCAACTAACCCAAACTA 59.924 52.381 0.00 0.00 0.00 2.24
4252 7455 0.178944 GCCCCCAACTAACCCAAACT 60.179 55.000 0.00 0.00 0.00 2.66
4253 7456 0.178944 AGCCCCCAACTAACCCAAAC 60.179 55.000 0.00 0.00 0.00 2.93
4254 7457 0.113580 GAGCCCCCAACTAACCCAAA 59.886 55.000 0.00 0.00 0.00 3.28
4255 7458 1.068943 TGAGCCCCCAACTAACCCAA 61.069 55.000 0.00 0.00 0.00 4.12
4256 7459 1.068943 TTGAGCCCCCAACTAACCCA 61.069 55.000 0.00 0.00 0.00 4.51
4257 7460 0.113580 TTTGAGCCCCCAACTAACCC 59.886 55.000 0.00 0.00 0.00 4.11
4258 7461 2.231716 ATTTGAGCCCCCAACTAACC 57.768 50.000 0.00 0.00 0.00 2.85
4259 7462 3.446161 GGTTATTTGAGCCCCCAACTAAC 59.554 47.826 12.05 12.05 39.43 2.34
4260 7463 3.564790 GGGTTATTTGAGCCCCCAACTAA 60.565 47.826 0.00 0.00 36.46 2.24
4262 7465 1.273041 GGGTTATTTGAGCCCCCAACT 60.273 52.381 0.00 0.00 36.46 3.16
4264 7467 0.787084 TGGGTTATTTGAGCCCCCAA 59.213 50.000 0.00 0.00 42.30 4.12
4265 7468 0.787084 TTGGGTTATTTGAGCCCCCA 59.213 50.000 0.00 0.00 43.54 4.96
4266 7469 1.945580 TTTGGGTTATTTGAGCCCCC 58.054 50.000 0.00 0.00 41.66 5.40
4270 7473 6.524101 TGGATACTTTTGGGTTATTTGAGC 57.476 37.500 0.00 0.00 37.61 4.26
4271 7474 8.364142 TGTTTGGATACTTTTGGGTTATTTGAG 58.636 33.333 0.00 0.00 37.61 3.02
4273 7476 7.602265 CCTGTTTGGATACTTTTGGGTTATTTG 59.398 37.037 0.00 0.00 38.35 2.32
4274 7477 7.511028 TCCTGTTTGGATACTTTTGGGTTATTT 59.489 33.333 0.00 0.00 40.56 1.40
4275 7478 7.013834 TCCTGTTTGGATACTTTTGGGTTATT 58.986 34.615 0.00 0.00 40.56 1.40
4276 7479 6.557568 TCCTGTTTGGATACTTTTGGGTTAT 58.442 36.000 0.00 0.00 40.56 1.89
4278 7481 4.810345 TCCTGTTTGGATACTTTTGGGTT 58.190 39.130 0.00 0.00 40.56 4.11
4280 7483 4.320935 CGTTCCTGTTTGGATACTTTTGGG 60.321 45.833 0.00 0.00 45.68 4.12
4281 7484 4.320935 CCGTTCCTGTTTGGATACTTTTGG 60.321 45.833 0.00 0.00 45.68 3.28
4282 7485 4.277423 ACCGTTCCTGTTTGGATACTTTTG 59.723 41.667 0.00 0.00 45.68 2.44
4283 7486 4.466827 ACCGTTCCTGTTTGGATACTTTT 58.533 39.130 0.00 0.00 45.68 2.27
4284 7487 4.094830 ACCGTTCCTGTTTGGATACTTT 57.905 40.909 0.00 0.00 45.68 2.66
4285 7488 3.782656 ACCGTTCCTGTTTGGATACTT 57.217 42.857 0.00 0.00 45.68 2.24
4286 7489 3.782656 AACCGTTCCTGTTTGGATACT 57.217 42.857 0.00 0.00 45.68 2.12
4287 7490 4.824289 TCTAACCGTTCCTGTTTGGATAC 58.176 43.478 0.00 0.00 45.68 2.24
4288 7491 4.529377 ACTCTAACCGTTCCTGTTTGGATA 59.471 41.667 0.00 0.00 45.68 2.59
4289 7492 3.326880 ACTCTAACCGTTCCTGTTTGGAT 59.673 43.478 0.00 0.00 45.68 3.41
4290 7493 2.701951 ACTCTAACCGTTCCTGTTTGGA 59.298 45.455 0.00 0.00 44.51 3.53
4291 7494 2.806244 CACTCTAACCGTTCCTGTTTGG 59.194 50.000 0.00 0.00 37.10 3.28
4292 7495 2.806244 CCACTCTAACCGTTCCTGTTTG 59.194 50.000 0.00 0.00 0.00 2.93
4293 7496 2.224450 CCCACTCTAACCGTTCCTGTTT 60.224 50.000 0.00 0.00 0.00 2.83
4294 7497 1.346722 CCCACTCTAACCGTTCCTGTT 59.653 52.381 0.00 0.00 0.00 3.16
4295 7498 0.974383 CCCACTCTAACCGTTCCTGT 59.026 55.000 0.00 0.00 0.00 4.00
4296 7499 0.974383 ACCCACTCTAACCGTTCCTG 59.026 55.000 0.00 0.00 0.00 3.86
4297 7500 1.725803 AACCCACTCTAACCGTTCCT 58.274 50.000 0.00 0.00 0.00 3.36
4300 7503 3.007290 GGAACTAACCCACTCTAACCGTT 59.993 47.826 0.00 0.00 0.00 4.44
4301 7504 2.564504 GGAACTAACCCACTCTAACCGT 59.435 50.000 0.00 0.00 0.00 4.83
4302 7505 2.564062 TGGAACTAACCCACTCTAACCG 59.436 50.000 0.00 0.00 0.00 4.44
4303 7506 4.470304 AGATGGAACTAACCCACTCTAACC 59.530 45.833 0.00 0.00 36.36 2.85
4304 7507 5.678955 AGATGGAACTAACCCACTCTAAC 57.321 43.478 0.00 0.00 36.36 2.34
4305 7508 7.070821 GGATTAGATGGAACTAACCCACTCTAA 59.929 40.741 0.00 0.00 36.37 2.10
4307 7510 5.367060 GGATTAGATGGAACTAACCCACTCT 59.633 44.000 0.00 0.00 36.37 3.24
4308 7511 5.130477 TGGATTAGATGGAACTAACCCACTC 59.870 44.000 0.00 0.00 40.07 3.51
4310 7513 5.367945 TGGATTAGATGGAACTAACCCAC 57.632 43.478 0.00 0.00 40.07 4.61
4312 7515 6.002653 AGTTGGATTAGATGGAACTAACCC 57.997 41.667 0.00 0.00 36.75 4.11
4313 7516 7.878644 GGATAGTTGGATTAGATGGAACTAACC 59.121 40.741 0.00 0.00 35.91 2.85
4314 7517 7.878644 GGGATAGTTGGATTAGATGGAACTAAC 59.121 40.741 0.00 0.00 35.60 2.34
4315 7518 7.256190 CGGGATAGTTGGATTAGATGGAACTAA 60.256 40.741 0.00 0.00 33.90 2.24
4317 7520 5.012148 CGGGATAGTTGGATTAGATGGAACT 59.988 44.000 0.00 0.00 0.00 3.01
4318 7521 5.238583 CGGGATAGTTGGATTAGATGGAAC 58.761 45.833 0.00 0.00 0.00 3.62
4319 7522 4.286032 CCGGGATAGTTGGATTAGATGGAA 59.714 45.833 0.00 0.00 0.00 3.53
4320 7523 3.838317 CCGGGATAGTTGGATTAGATGGA 59.162 47.826 0.00 0.00 0.00 3.41
4321 7524 3.583086 ACCGGGATAGTTGGATTAGATGG 59.417 47.826 6.32 0.00 0.00 3.51
4322 7525 4.563580 CCACCGGGATAGTTGGATTAGATG 60.564 50.000 6.32 0.00 35.59 2.90
4323 7526 3.583086 CCACCGGGATAGTTGGATTAGAT 59.417 47.826 6.32 0.00 35.59 1.98
4324 7527 2.969950 CCACCGGGATAGTTGGATTAGA 59.030 50.000 6.32 0.00 35.59 2.10
4325 7528 2.969950 TCCACCGGGATAGTTGGATTAG 59.030 50.000 6.32 0.00 38.64 1.73
4326 7529 2.969950 CTCCACCGGGATAGTTGGATTA 59.030 50.000 6.32 0.00 43.91 1.75
4327 7530 1.768870 CTCCACCGGGATAGTTGGATT 59.231 52.381 6.32 0.00 43.91 3.01
4328 7531 1.062428 TCTCCACCGGGATAGTTGGAT 60.062 52.381 6.32 0.00 43.91 3.41
4329 7532 0.337082 TCTCCACCGGGATAGTTGGA 59.663 55.000 6.32 7.82 43.91 3.53
4332 7535 0.338814 ACCTCTCCACCGGGATAGTT 59.661 55.000 6.32 0.00 43.91 2.24
4333 7536 0.397254 CACCTCTCCACCGGGATAGT 60.397 60.000 6.32 0.00 43.91 2.12
4334 7537 1.749334 GCACCTCTCCACCGGGATAG 61.749 65.000 6.32 0.00 43.91 2.08
4335 7538 1.760875 GCACCTCTCCACCGGGATA 60.761 63.158 6.32 0.00 43.91 2.59
4336 7539 3.083997 GCACCTCTCCACCGGGAT 61.084 66.667 6.32 0.00 43.91 3.85
4337 7540 3.846405 AAGCACCTCTCCACCGGGA 62.846 63.158 6.32 0.00 42.29 5.14
4338 7541 2.411765 AAAAGCACCTCTCCACCGGG 62.412 60.000 6.32 0.00 0.00 5.73
4339 7542 0.537371 AAAAAGCACCTCTCCACCGG 60.537 55.000 0.00 0.00 0.00 5.28
4340 7543 3.021451 AAAAAGCACCTCTCCACCG 57.979 52.632 0.00 0.00 0.00 4.94
4391 7594 8.185506 TGTTTGGATACTCTAACACAGTTAGA 57.814 34.615 16.22 16.22 31.46 2.10
4392 7595 7.545965 CCTGTTTGGATACTCTAACACAGTTAG 59.454 40.741 9.97 9.97 38.35 2.34
4393 7596 7.383687 CCTGTTTGGATACTCTAACACAGTTA 58.616 38.462 0.00 0.00 38.35 2.24
4394 7597 6.231211 CCTGTTTGGATACTCTAACACAGTT 58.769 40.000 0.00 0.00 38.35 3.16
4395 7598 5.280011 CCCTGTTTGGATACTCTAACACAGT 60.280 44.000 0.00 0.00 38.35 3.55
4396 7599 5.178797 CCCTGTTTGGATACTCTAACACAG 58.821 45.833 0.00 0.00 38.35 3.66
4397 7600 4.564821 GCCCTGTTTGGATACTCTAACACA 60.565 45.833 0.00 0.00 38.35 3.72
4398 7601 3.939592 GCCCTGTTTGGATACTCTAACAC 59.060 47.826 0.00 0.00 38.35 3.32
4401 7604 4.780815 CATGCCCTGTTTGGATACTCTAA 58.219 43.478 0.00 0.00 38.35 2.10
4402 7605 3.433598 GCATGCCCTGTTTGGATACTCTA 60.434 47.826 6.36 0.00 38.35 2.43
4403 7606 2.684927 GCATGCCCTGTTTGGATACTCT 60.685 50.000 6.36 0.00 38.35 3.24
4405 7608 1.005805 TGCATGCCCTGTTTGGATACT 59.994 47.619 16.68 0.00 38.35 2.12
4406 7609 1.473258 TGCATGCCCTGTTTGGATAC 58.527 50.000 16.68 0.00 38.35 2.24
4408 7611 0.828022 CATGCATGCCCTGTTTGGAT 59.172 50.000 14.93 0.00 38.35 3.41
4409 7612 2.278849 CATGCATGCCCTGTTTGGA 58.721 52.632 14.93 0.00 38.35 3.53
4410 7613 4.924019 CATGCATGCCCTGTTTGG 57.076 55.556 14.93 0.00 0.00 3.28
4456 7668 2.105766 GTATGTACCGGTGGTTCCTCT 58.894 52.381 19.93 0.00 37.09 3.69
4466 7678 2.548067 GGATCTGCCTTGTATGTACCGG 60.548 54.545 0.00 0.00 0.00 5.28
4490 7710 4.906664 TGGTTAACCTCTGTGGGTAGTTTA 59.093 41.667 24.78 0.00 39.54 2.01
4503 7723 4.082136 TGTTTGGTGTTGTTGGTTAACCTC 60.082 41.667 24.78 17.39 35.92 3.85
4545 7765 5.237127 GCCAGTTGAAAATTTCAGGAAAAGG 59.763 40.000 14.33 10.37 41.38 3.11
4547 7767 5.584251 GTGCCAGTTGAAAATTTCAGGAAAA 59.416 36.000 14.33 0.00 41.38 2.29
4548 7768 5.104982 AGTGCCAGTTGAAAATTTCAGGAAA 60.105 36.000 14.33 0.00 41.38 3.13
4550 7770 3.960102 AGTGCCAGTTGAAAATTTCAGGA 59.040 39.130 14.33 0.72 41.38 3.86
4551 7771 4.053295 CAGTGCCAGTTGAAAATTTCAGG 58.947 43.478 8.51 8.12 41.38 3.86
4554 7774 3.456280 TGCAGTGCCAGTTGAAAATTTC 58.544 40.909 13.72 0.00 0.00 2.17
4555 7775 3.540314 TGCAGTGCCAGTTGAAAATTT 57.460 38.095 13.72 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.