Multiple sequence alignment - TraesCS7B01G482900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G482900 chr7B 100.000 3599 0 0 1 3599 741225446 741229044 0.000000e+00 6647.0
1 TraesCS7B01G482900 chr7B 91.557 758 45 3 1781 2531 741261808 741261063 0.000000e+00 1027.0
2 TraesCS7B01G482900 chr7B 92.007 588 39 5 3012 3599 741291829 741291250 0.000000e+00 819.0
3 TraesCS7B01G482900 chr7B 87.255 102 10 1 2624 2722 712077752 712077651 2.940000e-21 113.0
4 TraesCS7B01G482900 chr7A 89.734 1578 78 37 982 2540 730723198 730721686 0.000000e+00 1940.0
5 TraesCS7B01G482900 chr7A 93.946 446 23 3 170 612 730725524 730725080 0.000000e+00 671.0
6 TraesCS7B01G482900 chr7A 85.294 306 28 7 614 906 730725031 730724730 2.100000e-77 300.0
7 TraesCS7B01G482900 chr7A 82.808 349 41 8 3117 3458 2537474 2537810 9.770000e-76 294.0
8 TraesCS7B01G482900 chr7A 92.500 120 7 1 495 612 730736121 730736002 1.720000e-38 171.0
9 TraesCS7B01G482900 chr7D 95.391 998 27 6 1554 2541 634919948 634918960 0.000000e+00 1570.0
10 TraesCS7B01G482900 chr7D 92.334 587 38 4 30 613 634922408 634921826 0.000000e+00 828.0
11 TraesCS7B01G482900 chr7D 94.824 483 25 0 965 1447 634920496 634920014 0.000000e+00 754.0
12 TraesCS7B01G482900 chr7D 85.185 216 12 5 704 906 634921751 634921543 1.690000e-48 204.0
13 TraesCS7B01G482900 chr7D 89.933 149 14 1 2853 3001 613016244 613016391 1.320000e-44 191.0
14 TraesCS7B01G482900 chr7D 97.059 34 1 0 3017 3050 616555467 616555434 1.400000e-04 58.4
15 TraesCS7B01G482900 chr7D 100.000 31 0 0 2539 2569 634918938 634918908 1.400000e-04 58.4
16 TraesCS7B01G482900 chr5D 81.876 1567 230 38 1001 2541 388873202 388871664 0.000000e+00 1271.0
17 TraesCS7B01G482900 chr5D 83.781 1005 133 24 1546 2537 428700455 428701442 0.000000e+00 926.0
18 TraesCS7B01G482900 chr5D 85.455 110 15 1 3383 3492 249362097 249362205 2.940000e-21 113.0
19 TraesCS7B01G482900 chr5A 83.813 1007 135 25 1546 2537 544534365 544535358 0.000000e+00 931.0
20 TraesCS7B01G482900 chr5A 90.637 267 19 4 3117 3382 181021723 181021462 2.060000e-92 350.0
21 TraesCS7B01G482900 chr5B 83.797 1006 131 26 1546 2537 517852964 517853951 0.000000e+00 926.0
22 TraesCS7B01G482900 chr5B 83.234 1002 145 16 1551 2540 467371098 467370108 0.000000e+00 898.0
23 TraesCS7B01G482900 chr5B 91.216 148 13 0 2854 3001 229081979 229081832 6.090000e-48 202.0
24 TraesCS7B01G482900 chr6B 92.509 267 15 3 3117 3382 195183283 195183545 9.430000e-101 377.0
25 TraesCS7B01G482900 chr6B 91.919 99 6 1 2624 2720 653759495 653759593 1.740000e-28 137.0
26 TraesCS7B01G482900 chr6B 89.899 99 8 1 2624 2720 653849578 653849676 3.770000e-25 126.0
27 TraesCS7B01G482900 chr3A 90.262 267 21 3 3117 3382 449449403 449449141 9.570000e-91 344.0
28 TraesCS7B01G482900 chr2A 89.888 267 21 4 3117 3382 343424835 343425096 4.450000e-89 339.0
29 TraesCS7B01G482900 chr2A 92.908 141 10 0 2861 3001 729555243 729555103 4.710000e-49 206.0
30 TraesCS7B01G482900 chr2A 91.724 145 11 1 2857 3001 642586831 642586974 2.190000e-47 200.0
31 TraesCS7B01G482900 chr1A 89.513 267 23 4 3117 3383 91317988 91318249 2.070000e-87 333.0
32 TraesCS7B01G482900 chr4D 93.103 145 9 1 2857 3001 226384947 226385090 1.010000e-50 211.0
33 TraesCS7B01G482900 chr4D 87.898 157 17 2 2847 3001 226455026 226455182 2.210000e-42 183.0
34 TraesCS7B01G482900 chr3D 92.361 144 10 1 2855 2998 590751751 590751893 1.690000e-48 204.0
35 TraesCS7B01G482900 chr3D 91.489 141 12 0 2861 3001 488120899 488121039 1.020000e-45 195.0
36 TraesCS7B01G482900 chr2D 91.489 141 12 0 2861 3001 74969871 74970011 1.020000e-45 195.0
37 TraesCS7B01G482900 chr2B 75.887 423 67 18 3121 3536 45603414 45603020 2.210000e-42 183.0
38 TraesCS7B01G482900 chr4B 90.000 100 7 2 2624 2720 22236428 22236329 3.770000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G482900 chr7B 741225446 741229044 3598 False 6647.000000 6647 100.0000 1 3599 1 chr7B.!!$F1 3598
1 TraesCS7B01G482900 chr7B 741261063 741261808 745 True 1027.000000 1027 91.5570 1781 2531 1 chr7B.!!$R2 750
2 TraesCS7B01G482900 chr7B 741291250 741291829 579 True 819.000000 819 92.0070 3012 3599 1 chr7B.!!$R3 587
3 TraesCS7B01G482900 chr7A 730721686 730725524 3838 True 970.333333 1940 89.6580 170 2540 3 chr7A.!!$R2 2370
4 TraesCS7B01G482900 chr7D 634918908 634922408 3500 True 682.880000 1570 93.5468 30 2569 5 chr7D.!!$R2 2539
5 TraesCS7B01G482900 chr5D 388871664 388873202 1538 True 1271.000000 1271 81.8760 1001 2541 1 chr5D.!!$R1 1540
6 TraesCS7B01G482900 chr5D 428700455 428701442 987 False 926.000000 926 83.7810 1546 2537 1 chr5D.!!$F2 991
7 TraesCS7B01G482900 chr5A 544534365 544535358 993 False 931.000000 931 83.8130 1546 2537 1 chr5A.!!$F1 991
8 TraesCS7B01G482900 chr5B 517852964 517853951 987 False 926.000000 926 83.7970 1546 2537 1 chr5B.!!$F1 991
9 TraesCS7B01G482900 chr5B 467370108 467371098 990 True 898.000000 898 83.2340 1551 2540 1 chr5B.!!$R2 989

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
950 1014 0.245539 TGTACTTGTACGAGGGCTGC 59.754 55.0 14.75 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2624 4345 0.033601 TCCGATTTTCATGGGGTGGG 60.034 55.0 0.0 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.109230 GTGCGTGATTGCTTCTAACAG 57.891 47.619 0.00 0.00 35.36 3.16
21 22 2.736721 GTGCGTGATTGCTTCTAACAGA 59.263 45.455 0.00 0.00 35.36 3.41
22 23 2.995939 TGCGTGATTGCTTCTAACAGAG 59.004 45.455 0.00 0.00 35.36 3.35
23 24 2.996621 GCGTGATTGCTTCTAACAGAGT 59.003 45.455 0.00 0.00 0.00 3.24
24 25 3.061429 GCGTGATTGCTTCTAACAGAGTC 59.939 47.826 0.00 0.00 0.00 3.36
25 26 4.489810 CGTGATTGCTTCTAACAGAGTCT 58.510 43.478 0.00 0.00 0.00 3.24
26 27 5.641709 CGTGATTGCTTCTAACAGAGTCTA 58.358 41.667 0.00 0.00 0.00 2.59
27 28 6.269315 CGTGATTGCTTCTAACAGAGTCTAT 58.731 40.000 0.00 0.00 0.00 1.98
28 29 7.418408 CGTGATTGCTTCTAACAGAGTCTATA 58.582 38.462 0.00 0.00 0.00 1.31
40 41 7.962995 AACAGAGTCTATAGTGAGATTCCAA 57.037 36.000 0.00 0.00 33.76 3.53
49 50 9.219603 TCTATAGTGAGATTCCAACACAAAAAG 57.780 33.333 0.00 0.00 37.05 2.27
81 82 2.840651 AGGCAGTTGGACTATAGCAACT 59.159 45.455 15.90 15.90 38.28 3.16
98 99 0.396974 ACTGCCCCAACAACACATGT 60.397 50.000 0.00 0.00 46.82 3.21
109 110 4.168922 ACAACACATGTCATGATGCAAG 57.831 40.909 19.77 9.29 37.96 4.01
112 113 1.474879 CACATGTCATGATGCAAGGCA 59.525 47.619 19.77 0.00 44.86 4.75
133 134 1.625818 AGGACAAGCCAAATCTCGTCT 59.374 47.619 0.00 0.00 40.02 4.18
134 135 1.734465 GGACAAGCCAAATCTCGTCTG 59.266 52.381 0.00 0.00 36.34 3.51
135 136 1.129437 GACAAGCCAAATCTCGTCTGC 59.871 52.381 0.00 0.00 0.00 4.26
150 151 0.461548 TCTGCAGGAGATGTTAGGCG 59.538 55.000 15.13 0.00 0.00 5.52
152 153 1.889573 GCAGGAGATGTTAGGCGGC 60.890 63.158 0.00 0.00 0.00 6.53
159 160 0.248621 GATGTTAGGCGGCAACATGC 60.249 55.000 29.90 21.24 44.55 4.06
165 166 2.703409 GCGGCAACATGCTACTCG 59.297 61.111 2.00 0.00 44.28 4.18
244 246 7.938140 TTGGGTACTGAAATAAGAAATCAGG 57.062 36.000 6.92 0.00 43.79 3.86
257 259 6.683974 AAGAAATCAGGACACCATAAATCG 57.316 37.500 0.00 0.00 0.00 3.34
322 324 1.680735 ACACCACGACATTTGCACAAT 59.319 42.857 0.00 0.00 0.00 2.71
334 336 7.223193 CGACATTTGCACAATCATCCAATTATT 59.777 33.333 0.00 0.00 0.00 1.40
363 365 4.078219 TCCCACATACCCAAGGTAGACTAT 60.078 45.833 0.00 0.00 41.83 2.12
376 379 4.346127 AGGTAGACTATGCAAGCATGATGA 59.654 41.667 17.26 0.00 37.82 2.92
379 382 3.558829 AGACTATGCAAGCATGATGAACG 59.441 43.478 17.26 0.74 37.82 3.95
478 481 3.652057 GGGAATCTTCAAGATCACCCA 57.348 47.619 25.71 0.00 43.91 4.51
509 512 5.789535 TCTTATCTTACTAGGGAAGGGCTT 58.210 41.667 6.78 0.00 0.00 4.35
512 515 2.045326 TCTTACTAGGGAAGGGCTTGGA 59.955 50.000 6.78 0.00 0.00 3.53
557 562 5.449107 AATCCAGCATCACAATGATTAGC 57.551 39.130 0.00 0.00 34.28 3.09
625 677 4.964897 TGAAGAGAAGGCATCTAGGAATGA 59.035 41.667 0.00 0.00 38.96 2.57
646 698 6.312141 TGAAAATCATAGATCCACAGACCA 57.688 37.500 0.00 0.00 0.00 4.02
674 726 0.546598 CCTCACTAATCACCCACCCC 59.453 60.000 0.00 0.00 0.00 4.95
687 739 4.093011 CACCCACCCCATTTCTAATCAAA 58.907 43.478 0.00 0.00 0.00 2.69
735 787 1.074566 GGCAGAGGGGAAATATGAGGG 59.925 57.143 0.00 0.00 0.00 4.30
738 790 3.497584 GCAGAGGGGAAATATGAGGGAAG 60.498 52.174 0.00 0.00 0.00 3.46
744 796 7.131069 AGAGGGGAAATATGAGGGAAGTTATTT 59.869 37.037 0.00 0.00 0.00 1.40
745 797 8.358082 AGGGGAAATATGAGGGAAGTTATTTA 57.642 34.615 0.00 0.00 0.00 1.40
746 798 8.797674 AGGGGAAATATGAGGGAAGTTATTTAA 58.202 33.333 0.00 0.00 0.00 1.52
809 862 8.629158 AGCTCTTGAAACAACATGTAAATTACA 58.371 29.630 8.40 8.40 43.80 2.41
844 897 5.783111 ACAACAAGTTGCTTTGTTTCTTCT 58.217 33.333 12.54 0.00 46.18 2.85
845 898 5.863935 ACAACAAGTTGCTTTGTTTCTTCTC 59.136 36.000 12.54 0.00 46.18 2.87
846 899 5.643379 ACAAGTTGCTTTGTTTCTTCTCA 57.357 34.783 1.81 0.00 38.05 3.27
847 900 5.644644 ACAAGTTGCTTTGTTTCTTCTCAG 58.355 37.500 1.81 0.00 38.05 3.35
849 902 4.273318 AGTTGCTTTGTTTCTTCTCAGGT 58.727 39.130 0.00 0.00 0.00 4.00
850 903 4.096984 AGTTGCTTTGTTTCTTCTCAGGTG 59.903 41.667 0.00 0.00 0.00 4.00
851 904 2.951642 TGCTTTGTTTCTTCTCAGGTGG 59.048 45.455 0.00 0.00 0.00 4.61
853 906 3.632145 GCTTTGTTTCTTCTCAGGTGGAA 59.368 43.478 0.00 0.00 0.00 3.53
854 907 4.097892 GCTTTGTTTCTTCTCAGGTGGAAA 59.902 41.667 0.00 0.00 0.00 3.13
879 943 6.484288 TCCCAAATGACAGTTTGACATAGAT 58.516 36.000 10.21 0.00 40.64 1.98
921 985 7.732996 TCAAGTGGTCTATACCCTAATTAAGC 58.267 38.462 0.00 0.00 46.16 3.09
922 986 7.346175 TCAAGTGGTCTATACCCTAATTAAGCA 59.654 37.037 0.00 0.00 46.16 3.91
924 988 7.908453 AGTGGTCTATACCCTAATTAAGCATC 58.092 38.462 0.00 0.00 46.16 3.91
942 1006 4.334443 GCATCTTGCATTGTACTTGTACG 58.666 43.478 6.46 0.00 44.26 3.67
944 1008 5.725042 GCATCTTGCATTGTACTTGTACGAG 60.725 44.000 8.69 8.69 44.26 4.18
945 1009 4.242475 TCTTGCATTGTACTTGTACGAGG 58.758 43.478 14.75 8.07 0.00 4.63
947 1011 1.664151 GCATTGTACTTGTACGAGGGC 59.336 52.381 14.75 11.29 0.00 5.19
949 1013 2.736144 TTGTACTTGTACGAGGGCTG 57.264 50.000 14.75 0.00 0.00 4.85
950 1014 0.245539 TGTACTTGTACGAGGGCTGC 59.754 55.000 14.75 0.00 0.00 5.25
951 1015 0.801067 GTACTTGTACGAGGGCTGCG 60.801 60.000 14.75 0.00 0.00 5.18
953 1017 1.517257 CTTGTACGAGGGCTGCGAG 60.517 63.158 1.70 0.00 0.00 5.03
955 1019 4.129737 GTACGAGGGCTGCGAGCA 62.130 66.667 9.78 0.00 44.75 4.26
958 1022 2.238847 TACGAGGGCTGCGAGCATTT 62.239 55.000 9.78 0.00 44.75 2.32
962 1026 2.768492 GGGCTGCGAGCATTTCCAG 61.768 63.158 9.78 0.00 44.75 3.86
963 1027 2.042831 GGCTGCGAGCATTTCCAGT 61.043 57.895 9.78 0.00 44.75 4.00
980 2585 1.129058 AGTTTTCCACCTCTCCACGT 58.871 50.000 0.00 0.00 0.00 4.49
1053 2658 2.973899 CCTCCACCTCTCCACGTG 59.026 66.667 9.08 9.08 0.00 4.49
1219 2836 4.682714 TCCCCCTGCTCCTGCCTT 62.683 66.667 0.00 0.00 38.71 4.35
1274 2891 4.477975 CGACGTCCCGCCAGAGAC 62.478 72.222 10.58 0.00 0.00 3.36
1284 2901 2.973899 CCAGAGACGGTGGACCTG 59.026 66.667 0.00 0.00 37.23 4.00
1466 3099 4.627035 GGTAACTTTTCCATTCATGCTTGC 59.373 41.667 0.00 0.00 0.00 4.01
1469 3102 2.350899 TTTCCATTCATGCTTGCGTG 57.649 45.000 8.39 8.39 0.00 5.34
1471 3104 0.961857 TCCATTCATGCTTGCGTGCT 60.962 50.000 9.72 0.00 0.00 4.40
1472 3105 0.800683 CCATTCATGCTTGCGTGCTG 60.801 55.000 9.72 9.28 0.00 4.41
1473 3106 0.109458 CATTCATGCTTGCGTGCTGT 60.109 50.000 9.72 0.00 0.00 4.40
1474 3107 0.109458 ATTCATGCTTGCGTGCTGTG 60.109 50.000 9.72 2.39 0.00 3.66
1475 3108 2.736343 TTCATGCTTGCGTGCTGTGC 62.736 55.000 9.72 0.00 0.00 4.57
1476 3109 3.289062 ATGCTTGCGTGCTGTGCA 61.289 55.556 8.72 8.72 41.38 4.57
1477 3110 3.263503 ATGCTTGCGTGCTGTGCAG 62.264 57.895 11.09 0.00 44.28 4.41
1478 3111 3.957535 GCTTGCGTGCTGTGCAGT 61.958 61.111 0.00 0.00 44.28 4.40
1479 3112 2.250485 CTTGCGTGCTGTGCAGTC 59.750 61.111 0.00 0.00 44.28 3.51
1480 3113 2.513435 TTGCGTGCTGTGCAGTCA 60.513 55.556 0.00 0.00 44.28 3.41
1482 3115 2.120355 TTGCGTGCTGTGCAGTCATG 62.120 55.000 0.00 6.34 44.28 3.07
1483 3116 2.865308 CGTGCTGTGCAGTCATGG 59.135 61.111 0.00 0.00 40.08 3.66
1484 3117 2.564975 GTGCTGTGCAGTCATGGC 59.435 61.111 0.00 0.00 40.08 4.40
1485 3118 3.051479 TGCTGTGCAGTCATGGCG 61.051 61.111 0.00 0.00 33.32 5.69
1486 3119 3.052082 GCTGTGCAGTCATGGCGT 61.052 61.111 0.00 0.00 0.00 5.68
1487 3120 3.031964 GCTGTGCAGTCATGGCGTC 62.032 63.158 0.00 0.00 0.00 5.19
1503 3144 1.337384 CGTCCTCCCATCCCATCACA 61.337 60.000 0.00 0.00 0.00 3.58
1504 3145 0.181350 GTCCTCCCATCCCATCACAC 59.819 60.000 0.00 0.00 0.00 3.82
1505 3146 0.253113 TCCTCCCATCCCATCACACA 60.253 55.000 0.00 0.00 0.00 3.72
1506 3147 0.848735 CCTCCCATCCCATCACACAT 59.151 55.000 0.00 0.00 0.00 3.21
1507 3148 1.478105 CCTCCCATCCCATCACACATG 60.478 57.143 0.00 0.00 0.00 3.21
1508 3149 0.106569 TCCCATCCCATCACACATGC 60.107 55.000 0.00 0.00 0.00 4.06
1509 3150 0.396001 CCCATCCCATCACACATGCA 60.396 55.000 0.00 0.00 0.00 3.96
1510 3151 1.029681 CCATCCCATCACACATGCAG 58.970 55.000 0.00 0.00 0.00 4.41
1511 3152 1.409101 CCATCCCATCACACATGCAGA 60.409 52.381 0.00 0.00 0.00 4.26
1526 3167 3.713936 CAGACATGCAACATGCTGG 57.286 52.632 17.07 0.00 45.31 4.85
1530 3171 1.065102 GACATGCAACATGCTGGCTAG 59.935 52.381 7.46 0.00 45.31 3.42
1545 3186 2.058913 GCTAGCTAAGAGCCGATGTC 57.941 55.000 7.70 0.00 43.77 3.06
1549 3203 1.759445 AGCTAAGAGCCGATGTCATGT 59.241 47.619 0.00 0.00 43.77 3.21
1582 3236 1.228094 TGCGCCTTGTTCCACATCA 60.228 52.632 4.18 0.00 0.00 3.07
1708 3362 4.715523 CCACCATCGCCCACCGTT 62.716 66.667 0.00 0.00 38.35 4.44
1954 3632 4.451150 GAGCCGCCCATGTCGACA 62.451 66.667 22.48 22.48 0.00 4.35
2337 4030 2.997315 CTGGACCAGGGCGTGAGA 60.997 66.667 14.26 0.00 0.00 3.27
2463 4159 2.298661 GGAGGGCGAGGAAGGGAAA 61.299 63.158 0.00 0.00 0.00 3.13
2583 4304 4.124943 CTGGATGGCTGGCCTGCT 62.125 66.667 30.65 14.96 36.94 4.24
2584 4305 3.657038 CTGGATGGCTGGCCTGCTT 62.657 63.158 30.65 19.94 36.94 3.91
2585 4306 2.832201 GGATGGCTGGCCTGCTTC 60.832 66.667 30.65 25.41 36.94 3.86
2586 4307 2.274760 GATGGCTGGCCTGCTTCT 59.725 61.111 30.65 17.12 36.94 2.85
2587 4308 1.823041 GATGGCTGGCCTGCTTCTC 60.823 63.158 30.65 20.73 36.94 2.87
2588 4309 3.694058 ATGGCTGGCCTGCTTCTCG 62.694 63.158 30.65 0.00 36.94 4.04
2589 4310 4.400961 GGCTGGCCTGCTTCTCGT 62.401 66.667 30.65 0.00 0.00 4.18
2590 4311 3.123620 GCTGGCCTGCTTCTCGTG 61.124 66.667 25.99 0.00 0.00 4.35
2591 4312 2.435586 CTGGCCTGCTTCTCGTGG 60.436 66.667 3.32 0.00 0.00 4.94
2592 4313 3.965539 CTGGCCTGCTTCTCGTGGG 62.966 68.421 3.32 0.00 0.00 4.61
2594 4315 4.704833 GCCTGCTTCTCGTGGGCA 62.705 66.667 0.00 6.07 42.08 5.36
2596 4317 2.345244 CTGCTTCTCGTGGGCAGT 59.655 61.111 18.19 0.00 45.59 4.40
2597 4318 2.031012 TGCTTCTCGTGGGCAGTG 59.969 61.111 2.89 0.00 0.00 3.66
2598 4319 2.343758 GCTTCTCGTGGGCAGTGA 59.656 61.111 0.00 0.00 0.00 3.41
2599 4320 1.739562 GCTTCTCGTGGGCAGTGAG 60.740 63.158 0.00 0.00 0.00 3.51
2600 4321 1.668294 CTTCTCGTGGGCAGTGAGT 59.332 57.895 0.00 0.00 0.00 3.41
2601 4322 0.668706 CTTCTCGTGGGCAGTGAGTG 60.669 60.000 0.00 0.00 0.00 3.51
2610 4331 3.794690 GCAGTGAGTGCGAGAGTAA 57.205 52.632 0.00 0.00 43.99 2.24
2611 4332 2.285827 GCAGTGAGTGCGAGAGTAAT 57.714 50.000 0.00 0.00 43.99 1.89
2612 4333 2.611518 GCAGTGAGTGCGAGAGTAATT 58.388 47.619 0.00 0.00 43.99 1.40
2613 4334 2.996621 GCAGTGAGTGCGAGAGTAATTT 59.003 45.455 0.00 0.00 43.99 1.82
2614 4335 4.174009 GCAGTGAGTGCGAGAGTAATTTA 58.826 43.478 0.00 0.00 43.99 1.40
2615 4336 4.806247 GCAGTGAGTGCGAGAGTAATTTAT 59.194 41.667 0.00 0.00 43.99 1.40
2616 4337 5.276584 GCAGTGAGTGCGAGAGTAATTTATG 60.277 44.000 0.00 0.00 43.99 1.90
2617 4338 6.036470 CAGTGAGTGCGAGAGTAATTTATGA 58.964 40.000 0.00 0.00 0.00 2.15
2618 4339 6.198029 CAGTGAGTGCGAGAGTAATTTATGAG 59.802 42.308 0.00 0.00 0.00 2.90
2619 4340 6.037098 GTGAGTGCGAGAGTAATTTATGAGT 58.963 40.000 0.00 0.00 0.00 3.41
2620 4341 7.067129 AGTGAGTGCGAGAGTAATTTATGAGTA 59.933 37.037 0.00 0.00 0.00 2.59
2621 4342 7.701078 GTGAGTGCGAGAGTAATTTATGAGTAA 59.299 37.037 0.00 0.00 0.00 2.24
2622 4343 8.414003 TGAGTGCGAGAGTAATTTATGAGTAAT 58.586 33.333 0.00 0.00 0.00 1.89
2623 4344 8.581057 AGTGCGAGAGTAATTTATGAGTAATG 57.419 34.615 0.00 0.00 0.00 1.90
2624 4345 7.169982 AGTGCGAGAGTAATTTATGAGTAATGC 59.830 37.037 0.00 0.00 0.00 3.56
2625 4346 6.423905 TGCGAGAGTAATTTATGAGTAATGCC 59.576 38.462 0.00 0.00 0.00 4.40
2626 4347 6.128526 GCGAGAGTAATTTATGAGTAATGCCC 60.129 42.308 0.00 0.00 0.00 5.36
2627 4348 6.929049 CGAGAGTAATTTATGAGTAATGCCCA 59.071 38.462 0.00 0.00 0.00 5.36
2628 4349 7.095607 CGAGAGTAATTTATGAGTAATGCCCAC 60.096 40.741 0.00 0.00 0.00 4.61
2629 4350 6.998673 AGAGTAATTTATGAGTAATGCCCACC 59.001 38.462 0.00 0.00 0.00 4.61
2630 4351 6.068670 AGTAATTTATGAGTAATGCCCACCC 58.931 40.000 0.00 0.00 0.00 4.61
2631 4352 3.306472 TTTATGAGTAATGCCCACCCC 57.694 47.619 0.00 0.00 0.00 4.95
2632 4353 1.900254 TATGAGTAATGCCCACCCCA 58.100 50.000 0.00 0.00 0.00 4.96
2633 4354 1.234806 ATGAGTAATGCCCACCCCAT 58.765 50.000 0.00 0.00 0.00 4.00
2634 4355 0.258484 TGAGTAATGCCCACCCCATG 59.742 55.000 0.00 0.00 0.00 3.66
2635 4356 0.550914 GAGTAATGCCCACCCCATGA 59.449 55.000 0.00 0.00 0.00 3.07
2636 4357 1.006813 AGTAATGCCCACCCCATGAA 58.993 50.000 0.00 0.00 0.00 2.57
2637 4358 1.360852 AGTAATGCCCACCCCATGAAA 59.639 47.619 0.00 0.00 0.00 2.69
2638 4359 2.183679 GTAATGCCCACCCCATGAAAA 58.816 47.619 0.00 0.00 0.00 2.29
2639 4360 1.969713 AATGCCCACCCCATGAAAAT 58.030 45.000 0.00 0.00 0.00 1.82
2640 4361 1.499368 ATGCCCACCCCATGAAAATC 58.501 50.000 0.00 0.00 0.00 2.17
2641 4362 0.969917 TGCCCACCCCATGAAAATCG 60.970 55.000 0.00 0.00 0.00 3.34
2642 4363 1.675720 GCCCACCCCATGAAAATCGG 61.676 60.000 0.00 0.00 0.00 4.18
2643 4364 0.033601 CCCACCCCATGAAAATCGGA 60.034 55.000 0.00 0.00 0.00 4.55
2644 4365 1.392589 CCACCCCATGAAAATCGGAG 58.607 55.000 0.00 0.00 0.00 4.63
2645 4366 1.064758 CCACCCCATGAAAATCGGAGA 60.065 52.381 0.00 0.00 45.75 3.71
2646 4367 2.620367 CCACCCCATGAAAATCGGAGAA 60.620 50.000 0.00 0.00 43.58 2.87
2647 4368 2.684881 CACCCCATGAAAATCGGAGAAG 59.315 50.000 0.00 0.00 43.58 2.85
2648 4369 2.576191 ACCCCATGAAAATCGGAGAAGA 59.424 45.455 0.00 0.00 43.58 2.87
2649 4370 3.209410 CCCCATGAAAATCGGAGAAGAG 58.791 50.000 0.00 0.00 43.58 2.85
2650 4371 3.209410 CCCATGAAAATCGGAGAAGAGG 58.791 50.000 0.00 0.00 43.58 3.69
2651 4372 3.118261 CCCATGAAAATCGGAGAAGAGGA 60.118 47.826 0.00 0.00 43.58 3.71
2652 4373 4.445448 CCCATGAAAATCGGAGAAGAGGAT 60.445 45.833 0.00 0.00 43.58 3.24
2653 4374 5.221722 CCCATGAAAATCGGAGAAGAGGATA 60.222 44.000 0.00 0.00 43.58 2.59
2654 4375 5.931146 CCATGAAAATCGGAGAAGAGGATAG 59.069 44.000 0.00 0.00 43.58 2.08
2655 4376 6.463614 CCATGAAAATCGGAGAAGAGGATAGT 60.464 42.308 0.00 0.00 43.58 2.12
2656 4377 6.546428 TGAAAATCGGAGAAGAGGATAGTT 57.454 37.500 0.00 0.00 43.58 2.24
2657 4378 7.655521 TGAAAATCGGAGAAGAGGATAGTTA 57.344 36.000 0.00 0.00 43.58 2.24
2658 4379 7.717568 TGAAAATCGGAGAAGAGGATAGTTAG 58.282 38.462 0.00 0.00 43.58 2.34
2659 4380 7.342284 TGAAAATCGGAGAAGAGGATAGTTAGT 59.658 37.037 0.00 0.00 43.58 2.24
2660 4381 7.663043 AAATCGGAGAAGAGGATAGTTAGTT 57.337 36.000 0.00 0.00 43.58 2.24
2661 4382 7.663043 AATCGGAGAAGAGGATAGTTAGTTT 57.337 36.000 0.00 0.00 43.58 2.66
2662 4383 6.452494 TCGGAGAAGAGGATAGTTAGTTTG 57.548 41.667 0.00 0.00 0.00 2.93
2663 4384 6.185511 TCGGAGAAGAGGATAGTTAGTTTGA 58.814 40.000 0.00 0.00 0.00 2.69
2664 4385 6.319152 TCGGAGAAGAGGATAGTTAGTTTGAG 59.681 42.308 0.00 0.00 0.00 3.02
2665 4386 6.319152 CGGAGAAGAGGATAGTTAGTTTGAGA 59.681 42.308 0.00 0.00 0.00 3.27
2666 4387 7.148052 CGGAGAAGAGGATAGTTAGTTTGAGAA 60.148 40.741 0.00 0.00 0.00 2.87
2667 4388 8.194769 GGAGAAGAGGATAGTTAGTTTGAGAAG 58.805 40.741 0.00 0.00 0.00 2.85
2668 4389 8.887264 AGAAGAGGATAGTTAGTTTGAGAAGA 57.113 34.615 0.00 0.00 0.00 2.87
2669 4390 9.487442 AGAAGAGGATAGTTAGTTTGAGAAGAT 57.513 33.333 0.00 0.00 0.00 2.40
2670 4391 9.744468 GAAGAGGATAGTTAGTTTGAGAAGATC 57.256 37.037 0.00 0.00 0.00 2.75
2671 4392 8.245195 AGAGGATAGTTAGTTTGAGAAGATCC 57.755 38.462 0.00 0.00 0.00 3.36
2672 4393 8.065007 AGAGGATAGTTAGTTTGAGAAGATCCT 58.935 37.037 0.00 0.00 42.59 3.24
2673 4394 9.357161 GAGGATAGTTAGTTTGAGAAGATCCTA 57.643 37.037 0.00 0.00 40.53 2.94
2674 4395 9.362151 AGGATAGTTAGTTTGAGAAGATCCTAG 57.638 37.037 0.00 0.00 39.06 3.02
2675 4396 9.138596 GGATAGTTAGTTTGAGAAGATCCTAGT 57.861 37.037 0.00 0.00 0.00 2.57
2677 4398 9.702253 ATAGTTAGTTTGAGAAGATCCTAGTCA 57.298 33.333 0.00 0.00 0.00 3.41
2678 4399 8.062065 AGTTAGTTTGAGAAGATCCTAGTCAG 57.938 38.462 0.00 0.00 0.00 3.51
2679 4400 5.337578 AGTTTGAGAAGATCCTAGTCAGC 57.662 43.478 0.00 0.00 0.00 4.26
2680 4401 4.109050 GTTTGAGAAGATCCTAGTCAGCG 58.891 47.826 0.00 0.00 0.00 5.18
2681 4402 3.006112 TGAGAAGATCCTAGTCAGCGT 57.994 47.619 0.00 0.00 0.00 5.07
2682 4403 2.685388 TGAGAAGATCCTAGTCAGCGTG 59.315 50.000 0.00 0.00 0.00 5.34
2683 4404 2.685897 GAGAAGATCCTAGTCAGCGTGT 59.314 50.000 0.00 0.00 0.00 4.49
2684 4405 3.878103 GAGAAGATCCTAGTCAGCGTGTA 59.122 47.826 0.00 0.00 0.00 2.90
2685 4406 4.270834 AGAAGATCCTAGTCAGCGTGTAA 58.729 43.478 0.00 0.00 0.00 2.41
2686 4407 4.705507 AGAAGATCCTAGTCAGCGTGTAAA 59.294 41.667 0.00 0.00 0.00 2.01
2687 4408 5.185249 AGAAGATCCTAGTCAGCGTGTAAAA 59.815 40.000 0.00 0.00 0.00 1.52
2688 4409 5.401531 AGATCCTAGTCAGCGTGTAAAAA 57.598 39.130 0.00 0.00 0.00 1.94
2689 4410 5.169295 AGATCCTAGTCAGCGTGTAAAAAC 58.831 41.667 0.00 0.00 0.00 2.43
2690 4411 4.325028 TCCTAGTCAGCGTGTAAAAACA 57.675 40.909 0.00 0.00 0.00 2.83
2691 4412 4.890088 TCCTAGTCAGCGTGTAAAAACAT 58.110 39.130 0.00 0.00 0.00 2.71
2692 4413 4.688879 TCCTAGTCAGCGTGTAAAAACATG 59.311 41.667 0.00 0.00 0.00 3.21
2693 4414 4.451096 CCTAGTCAGCGTGTAAAAACATGT 59.549 41.667 0.00 0.00 0.00 3.21
2694 4415 5.636121 CCTAGTCAGCGTGTAAAAACATGTA 59.364 40.000 0.00 0.00 0.00 2.29
2695 4416 5.994887 AGTCAGCGTGTAAAAACATGTAA 57.005 34.783 0.00 0.00 0.00 2.41
2696 4417 6.366315 AGTCAGCGTGTAAAAACATGTAAA 57.634 33.333 0.00 0.00 0.00 2.01
2697 4418 6.196571 AGTCAGCGTGTAAAAACATGTAAAC 58.803 36.000 0.00 0.00 0.00 2.01
2698 4419 5.397240 GTCAGCGTGTAAAAACATGTAAACC 59.603 40.000 0.00 0.00 0.00 3.27
2699 4420 5.297278 TCAGCGTGTAAAAACATGTAAACCT 59.703 36.000 0.00 0.00 0.00 3.50
2700 4421 5.974751 CAGCGTGTAAAAACATGTAAACCTT 59.025 36.000 0.00 0.00 0.00 3.50
2701 4422 6.474102 CAGCGTGTAAAAACATGTAAACCTTT 59.526 34.615 0.00 0.00 0.00 3.11
2702 4423 6.474102 AGCGTGTAAAAACATGTAAACCTTTG 59.526 34.615 0.00 0.00 0.00 2.77
2703 4424 6.253942 GCGTGTAAAAACATGTAAACCTTTGT 59.746 34.615 0.00 0.00 0.00 2.83
2704 4425 7.431668 GCGTGTAAAAACATGTAAACCTTTGTA 59.568 33.333 0.00 0.00 0.00 2.41
2705 4426 9.453325 CGTGTAAAAACATGTAAACCTTTGTAT 57.547 29.630 0.00 0.00 0.00 2.29
2730 4451 9.882996 ATGTTTATTATTATTGTGAGTGCGATG 57.117 29.630 0.00 0.00 0.00 3.84
2731 4452 7.855409 TGTTTATTATTATTGTGAGTGCGATGC 59.145 33.333 0.00 0.00 0.00 3.91
2732 4453 7.728847 TTATTATTATTGTGAGTGCGATGCT 57.271 32.000 0.00 0.00 0.00 3.79
2733 4454 6.624352 ATTATTATTGTGAGTGCGATGCTT 57.376 33.333 0.00 0.00 0.00 3.91
2734 4455 7.728847 ATTATTATTGTGAGTGCGATGCTTA 57.271 32.000 0.00 0.00 0.00 3.09
2735 4456 5.663795 ATTATTGTGAGTGCGATGCTTAG 57.336 39.130 0.00 0.00 0.00 2.18
2736 4457 2.455674 TTGTGAGTGCGATGCTTAGT 57.544 45.000 0.00 0.00 0.00 2.24
2737 4458 3.586100 TTGTGAGTGCGATGCTTAGTA 57.414 42.857 0.00 0.00 0.00 1.82
2738 4459 3.586100 TGTGAGTGCGATGCTTAGTAA 57.414 42.857 0.00 0.00 0.00 2.24
2739 4460 3.920446 TGTGAGTGCGATGCTTAGTAAA 58.080 40.909 0.00 0.00 0.00 2.01
2740 4461 4.503910 TGTGAGTGCGATGCTTAGTAAAT 58.496 39.130 0.00 0.00 0.00 1.40
2741 4462 4.329801 TGTGAGTGCGATGCTTAGTAAATG 59.670 41.667 0.00 0.00 0.00 2.32
2742 4463 3.309682 TGAGTGCGATGCTTAGTAAATGC 59.690 43.478 0.00 0.00 0.00 3.56
2743 4464 3.535561 AGTGCGATGCTTAGTAAATGCT 58.464 40.909 0.00 0.00 0.00 3.79
2744 4465 4.693283 AGTGCGATGCTTAGTAAATGCTA 58.307 39.130 0.00 0.00 0.00 3.49
2745 4466 5.300752 AGTGCGATGCTTAGTAAATGCTAT 58.699 37.500 0.00 0.00 0.00 2.97
2746 4467 5.760253 AGTGCGATGCTTAGTAAATGCTATT 59.240 36.000 0.00 0.00 0.00 1.73
2747 4468 6.073548 AGTGCGATGCTTAGTAAATGCTATTC 60.074 38.462 0.00 0.00 0.00 1.75
2748 4469 5.107491 TGCGATGCTTAGTAAATGCTATTCG 60.107 40.000 0.00 0.00 0.00 3.34
2749 4470 5.107453 GCGATGCTTAGTAAATGCTATTCGT 60.107 40.000 0.00 0.00 32.01 3.85
2750 4471 6.089016 GCGATGCTTAGTAAATGCTATTCGTA 59.911 38.462 0.00 0.00 32.01 3.43
2751 4472 7.437912 CGATGCTTAGTAAATGCTATTCGTAC 58.562 38.462 0.00 0.00 0.00 3.67
2752 4473 6.742999 TGCTTAGTAAATGCTATTCGTACG 57.257 37.500 9.53 9.53 0.00 3.67
2753 4474 6.267817 TGCTTAGTAAATGCTATTCGTACGT 58.732 36.000 16.05 0.00 0.00 3.57
2754 4475 7.416817 TGCTTAGTAAATGCTATTCGTACGTA 58.583 34.615 16.05 6.02 0.00 3.57
2755 4476 7.376866 TGCTTAGTAAATGCTATTCGTACGTAC 59.623 37.037 15.90 15.90 0.00 3.67
2756 4477 7.589221 GCTTAGTAAATGCTATTCGTACGTACT 59.411 37.037 22.55 13.69 0.00 2.73
2758 4479 9.864034 TTAGTAAATGCTATTCGTACGTACTAC 57.136 33.333 22.55 13.50 0.00 2.73
2759 4480 8.147642 AGTAAATGCTATTCGTACGTACTACT 57.852 34.615 22.55 15.28 0.00 2.57
2760 4481 8.279103 AGTAAATGCTATTCGTACGTACTACTC 58.721 37.037 22.55 8.06 0.00 2.59
2761 4482 5.604010 ATGCTATTCGTACGTACTACTCC 57.396 43.478 22.55 7.90 0.00 3.85
2762 4483 3.809832 TGCTATTCGTACGTACTACTCCC 59.190 47.826 22.55 8.36 0.00 4.30
2763 4484 4.061596 GCTATTCGTACGTACTACTCCCT 58.938 47.826 22.55 4.09 0.00 4.20
2764 4485 4.151512 GCTATTCGTACGTACTACTCCCTC 59.848 50.000 22.55 2.73 0.00 4.30
2765 4486 3.895232 TTCGTACGTACTACTCCCTCT 57.105 47.619 22.55 0.00 0.00 3.69
2766 4487 3.170791 TCGTACGTACTACTCCCTCTG 57.829 52.381 22.55 4.10 0.00 3.35
2767 4488 2.497675 TCGTACGTACTACTCCCTCTGT 59.502 50.000 22.55 0.00 0.00 3.41
2768 4489 3.699538 TCGTACGTACTACTCCCTCTGTA 59.300 47.826 22.55 0.00 0.00 2.74
2769 4490 4.159693 TCGTACGTACTACTCCCTCTGTAA 59.840 45.833 22.55 0.00 0.00 2.41
2770 4491 4.870426 CGTACGTACTACTCCCTCTGTAAA 59.130 45.833 22.55 0.00 0.00 2.01
2771 4492 5.006165 CGTACGTACTACTCCCTCTGTAAAG 59.994 48.000 22.55 0.00 0.00 1.85
2772 4493 5.171339 ACGTACTACTCCCTCTGTAAAGA 57.829 43.478 0.00 0.00 0.00 2.52
2773 4494 5.184711 ACGTACTACTCCCTCTGTAAAGAG 58.815 45.833 2.55 2.55 35.78 2.85
2774 4495 4.035441 CGTACTACTCCCTCTGTAAAGAGC 59.965 50.000 4.17 0.00 34.74 4.09
2775 4496 4.048970 ACTACTCCCTCTGTAAAGAGCA 57.951 45.455 4.17 0.00 34.74 4.26
2776 4497 4.615513 ACTACTCCCTCTGTAAAGAGCAT 58.384 43.478 4.17 0.00 34.74 3.79
2777 4498 5.026790 ACTACTCCCTCTGTAAAGAGCATT 58.973 41.667 4.17 0.00 34.74 3.56
2778 4499 4.917906 ACTCCCTCTGTAAAGAGCATTT 57.082 40.909 4.17 0.00 34.74 2.32
2779 4500 6.668283 ACTACTCCCTCTGTAAAGAGCATTTA 59.332 38.462 4.17 0.00 34.74 1.40
2780 4501 5.983540 ACTCCCTCTGTAAAGAGCATTTAG 58.016 41.667 4.17 0.09 34.74 1.85
2781 4502 5.721960 ACTCCCTCTGTAAAGAGCATTTAGA 59.278 40.000 4.17 0.00 34.74 2.10
2782 4503 6.385467 ACTCCCTCTGTAAAGAGCATTTAGAT 59.615 38.462 4.17 0.00 34.74 1.98
2783 4504 7.565398 ACTCCCTCTGTAAAGAGCATTTAGATA 59.435 37.037 4.17 0.00 34.74 1.98
2784 4505 8.319057 TCCCTCTGTAAAGAGCATTTAGATAA 57.681 34.615 4.17 0.00 34.74 1.75
2785 4506 8.768397 TCCCTCTGTAAAGAGCATTTAGATAAA 58.232 33.333 4.17 0.00 34.74 1.40
2786 4507 9.566432 CCCTCTGTAAAGAGCATTTAGATAAAT 57.434 33.333 4.17 0.00 33.63 1.40
2861 4582 8.816640 AAAAATCTATGCACGATTCTTTTGTT 57.183 26.923 12.05 1.88 31.12 2.83
2862 4583 8.816640 AAAATCTATGCACGATTCTTTTGTTT 57.183 26.923 12.05 1.32 31.12 2.83
2863 4584 8.816640 AAATCTATGCACGATTCTTTTGTTTT 57.183 26.923 12.05 0.00 31.12 2.43
2864 4585 8.816640 AATCTATGCACGATTCTTTTGTTTTT 57.183 26.923 7.13 0.00 0.00 1.94
2882 4603 4.572985 TTTTTGGACATCAGCACAGAAG 57.427 40.909 0.00 0.00 0.00 2.85
2883 4604 1.527034 TTGGACATCAGCACAGAAGC 58.473 50.000 0.00 0.00 0.00 3.86
2884 4605 0.397564 TGGACATCAGCACAGAAGCA 59.602 50.000 0.00 0.00 36.85 3.91
2885 4606 1.202794 TGGACATCAGCACAGAAGCAA 60.203 47.619 0.00 0.00 36.85 3.91
2886 4607 1.467734 GGACATCAGCACAGAAGCAAG 59.532 52.381 0.00 0.00 36.85 4.01
2887 4608 0.879765 ACATCAGCACAGAAGCAAGC 59.120 50.000 0.00 0.00 36.85 4.01
2888 4609 0.179197 CATCAGCACAGAAGCAAGCG 60.179 55.000 0.00 0.00 36.85 4.68
2889 4610 1.919956 ATCAGCACAGAAGCAAGCGC 61.920 55.000 0.00 0.00 36.85 5.92
2904 4625 3.916439 CGCTCATACATACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
2905 4626 2.434688 CGCTCATACATACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
2906 4627 1.613270 CGCTCATACATACGCGCATA 58.387 50.000 5.73 0.00 39.11 3.14
2907 4628 1.317611 CGCTCATACATACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
2908 4629 1.317611 GCTCATACATACGCGCATACG 59.682 52.381 5.73 0.00 44.07 3.06
2920 4641 1.633561 CGCATACGCTCATCCCTATG 58.366 55.000 0.00 0.00 35.30 2.23
2921 4642 1.202348 CGCATACGCTCATCCCTATGA 59.798 52.381 0.00 0.00 39.87 2.15
2922 4643 2.352715 CGCATACGCTCATCCCTATGAA 60.353 50.000 0.00 0.00 41.57 2.57
2923 4644 2.996621 GCATACGCTCATCCCTATGAAC 59.003 50.000 0.00 0.00 41.57 3.18
2925 4646 2.522060 CGCTCATCCCTATGAACGC 58.478 57.895 0.00 0.00 42.71 4.84
2926 4647 0.249447 CGCTCATCCCTATGAACGCA 60.249 55.000 0.00 0.00 42.71 5.24
2927 4648 1.221414 GCTCATCCCTATGAACGCAC 58.779 55.000 0.00 0.00 41.57 5.34
2928 4649 1.473257 GCTCATCCCTATGAACGCACA 60.473 52.381 0.00 0.00 41.57 4.57
2929 4650 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
2930 4651 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
2931 4652 2.170397 TCATCCCTATGAACGCACACAT 59.830 45.455 0.00 0.00 39.20 3.21
2932 4653 2.022764 TCCCTATGAACGCACACATG 57.977 50.000 0.00 0.00 0.00 3.21
2933 4654 5.380513 CATCCCTATGAACGCACACATGC 62.381 52.174 0.00 0.00 41.02 4.06
2945 4666 2.224606 CACACATGCACATCCTATCCC 58.775 52.381 0.00 0.00 0.00 3.85
2946 4667 2.130193 ACACATGCACATCCTATCCCT 58.870 47.619 0.00 0.00 0.00 4.20
2947 4668 3.071457 CACACATGCACATCCTATCCCTA 59.929 47.826 0.00 0.00 0.00 3.53
2948 4669 3.912528 ACACATGCACATCCTATCCCTAT 59.087 43.478 0.00 0.00 0.00 2.57
2949 4670 4.259356 CACATGCACATCCTATCCCTATG 58.741 47.826 0.00 0.00 0.00 2.23
2950 4671 4.019950 CACATGCACATCCTATCCCTATGA 60.020 45.833 0.00 0.00 0.00 2.15
2951 4672 4.224594 ACATGCACATCCTATCCCTATGAG 59.775 45.833 0.00 0.00 0.00 2.90
2952 4673 2.568956 TGCACATCCTATCCCTATGAGC 59.431 50.000 0.00 0.00 37.61 4.26
2953 4674 2.417924 GCACATCCTATCCCTATGAGCG 60.418 54.545 0.00 0.00 29.81 5.03
2954 4675 1.827969 ACATCCTATCCCTATGAGCGC 59.172 52.381 0.00 0.00 0.00 5.92
2955 4676 1.137872 CATCCTATCCCTATGAGCGCC 59.862 57.143 2.29 0.00 0.00 6.53
2956 4677 0.409876 TCCTATCCCTATGAGCGCCT 59.590 55.000 2.29 0.00 0.00 5.52
2957 4678 0.820871 CCTATCCCTATGAGCGCCTC 59.179 60.000 2.29 1.22 0.00 4.70
2958 4679 0.820871 CTATCCCTATGAGCGCCTCC 59.179 60.000 2.29 0.00 0.00 4.30
2959 4680 0.614979 TATCCCTATGAGCGCCTCCC 60.615 60.000 2.29 0.00 0.00 4.30
2960 4681 2.679619 ATCCCTATGAGCGCCTCCCA 62.680 60.000 2.29 0.00 0.00 4.37
2961 4682 2.739784 CCTATGAGCGCCTCCCAG 59.260 66.667 2.29 1.24 0.00 4.45
2962 4683 1.834378 CCTATGAGCGCCTCCCAGA 60.834 63.158 2.29 0.00 0.00 3.86
2963 4684 1.664873 CTATGAGCGCCTCCCAGAG 59.335 63.158 2.29 0.00 0.00 3.35
2964 4685 0.825425 CTATGAGCGCCTCCCAGAGA 60.825 60.000 2.29 0.00 0.00 3.10
2965 4686 1.109920 TATGAGCGCCTCCCAGAGAC 61.110 60.000 2.29 0.00 0.00 3.36
2966 4687 2.757917 GAGCGCCTCCCAGAGACT 60.758 66.667 2.29 0.00 0.00 3.24
2967 4688 3.073735 AGCGCCTCCCAGAGACTG 61.074 66.667 2.29 0.00 0.00 3.51
2968 4689 3.071206 GCGCCTCCCAGAGACTGA 61.071 66.667 0.00 0.00 32.44 3.41
2969 4690 3.074999 GCGCCTCCCAGAGACTGAG 62.075 68.421 0.00 0.00 32.44 3.35
2970 4691 2.899505 GCCTCCCAGAGACTGAGC 59.100 66.667 0.00 0.00 32.44 4.26
2971 4692 2.730524 GCCTCCCAGAGACTGAGCC 61.731 68.421 0.00 0.00 32.44 4.70
2972 4693 2.422231 CCTCCCAGAGACTGAGCCG 61.422 68.421 0.00 0.00 32.44 5.52
2973 4694 2.363018 TCCCAGAGACTGAGCCGG 60.363 66.667 0.00 0.00 32.44 6.13
2974 4695 4.154347 CCCAGAGACTGAGCCGGC 62.154 72.222 21.89 21.89 32.44 6.13
2975 4696 3.385384 CCAGAGACTGAGCCGGCA 61.385 66.667 31.54 7.98 32.44 5.69
2976 4697 2.729479 CCAGAGACTGAGCCGGCAT 61.729 63.158 31.54 14.28 32.44 4.40
2977 4698 1.521010 CAGAGACTGAGCCGGCATG 60.521 63.158 31.54 19.90 32.44 4.06
2978 4699 1.986757 AGAGACTGAGCCGGCATGT 60.987 57.895 31.54 23.16 0.00 3.21
2979 4700 1.520342 GAGACTGAGCCGGCATGTC 60.520 63.158 31.54 29.08 0.00 3.06
2980 4701 2.230994 GAGACTGAGCCGGCATGTCA 62.231 60.000 32.41 25.37 0.00 3.58
2981 4702 1.153289 GACTGAGCCGGCATGTCAT 60.153 57.895 31.54 13.17 0.00 3.06
2982 4703 1.153289 ACTGAGCCGGCATGTCATC 60.153 57.895 31.54 16.99 0.00 2.92
2983 4704 1.145598 CTGAGCCGGCATGTCATCT 59.854 57.895 31.54 4.27 0.00 2.90
2984 4705 0.463295 CTGAGCCGGCATGTCATCTT 60.463 55.000 31.54 3.33 0.00 2.40
2985 4706 0.745486 TGAGCCGGCATGTCATCTTG 60.745 55.000 31.54 0.00 0.00 3.02
2986 4707 0.462581 GAGCCGGCATGTCATCTTGA 60.463 55.000 31.54 0.00 0.00 3.02
2987 4708 0.035152 AGCCGGCATGTCATCTTGAA 60.035 50.000 31.54 0.00 0.00 2.69
2988 4709 0.810648 GCCGGCATGTCATCTTGAAA 59.189 50.000 24.80 0.00 0.00 2.69
2989 4710 1.406539 GCCGGCATGTCATCTTGAAAT 59.593 47.619 24.80 0.00 0.00 2.17
2990 4711 2.159198 GCCGGCATGTCATCTTGAAATT 60.159 45.455 24.80 0.00 0.00 1.82
2991 4712 3.676873 GCCGGCATGTCATCTTGAAATTT 60.677 43.478 24.80 0.00 0.00 1.82
2992 4713 4.439974 GCCGGCATGTCATCTTGAAATTTA 60.440 41.667 24.80 0.00 0.00 1.40
2993 4714 5.036737 CCGGCATGTCATCTTGAAATTTAC 58.963 41.667 0.00 0.00 0.00 2.01
2994 4715 4.730042 CGGCATGTCATCTTGAAATTTACG 59.270 41.667 0.00 0.00 0.00 3.18
2995 4716 5.447144 CGGCATGTCATCTTGAAATTTACGA 60.447 40.000 0.00 0.00 0.00 3.43
2996 4717 6.321717 GGCATGTCATCTTGAAATTTACGAA 58.678 36.000 0.00 0.00 0.00 3.85
2997 4718 6.470235 GGCATGTCATCTTGAAATTTACGAAG 59.530 38.462 0.00 0.00 0.00 3.79
2999 4720 7.217070 GCATGTCATCTTGAAATTTACGAAGTC 59.783 37.037 0.00 0.00 43.93 3.01
3000 4721 7.722795 TGTCATCTTGAAATTTACGAAGTCA 57.277 32.000 0.00 0.00 43.93 3.41
3001 4722 8.322906 TGTCATCTTGAAATTTACGAAGTCAT 57.677 30.769 0.00 0.00 43.93 3.06
3002 4723 8.229811 TGTCATCTTGAAATTTACGAAGTCATG 58.770 33.333 0.00 0.00 43.93 3.07
3003 4724 7.217070 GTCATCTTGAAATTTACGAAGTCATGC 59.783 37.037 0.00 0.00 43.93 4.06
3004 4725 6.552859 TCTTGAAATTTACGAAGTCATGCA 57.447 33.333 0.00 0.00 43.93 3.96
3005 4726 7.144722 TCTTGAAATTTACGAAGTCATGCAT 57.855 32.000 0.00 0.00 43.93 3.96
3006 4727 7.022979 TCTTGAAATTTACGAAGTCATGCATG 58.977 34.615 21.07 21.07 43.93 4.06
3007 4728 6.493449 TGAAATTTACGAAGTCATGCATGA 57.507 33.333 25.42 25.42 43.93 3.07
3008 4729 7.087409 TGAAATTTACGAAGTCATGCATGAT 57.913 32.000 30.89 17.33 43.93 2.45
3009 4730 7.537715 TGAAATTTACGAAGTCATGCATGATT 58.462 30.769 30.89 24.57 43.93 2.57
3010 4731 7.697710 TGAAATTTACGAAGTCATGCATGATTC 59.302 33.333 30.89 27.72 43.93 2.52
3011 4732 6.932356 ATTTACGAAGTCATGCATGATTCT 57.068 33.333 30.89 21.30 43.93 2.40
3012 4733 6.741992 TTTACGAAGTCATGCATGATTCTT 57.258 33.333 30.89 27.43 43.93 2.52
3013 4734 6.741992 TTACGAAGTCATGCATGATTCTTT 57.258 33.333 30.89 21.36 43.93 2.52
3014 4735 5.633830 ACGAAGTCATGCATGATTCTTTT 57.366 34.783 30.89 19.18 29.74 2.27
3015 4736 6.017400 ACGAAGTCATGCATGATTCTTTTT 57.983 33.333 30.89 17.08 29.74 1.94
3036 4757 2.311124 AACTAGTAGAATGCCCGTGC 57.689 50.000 3.59 0.00 38.26 5.34
3038 4759 0.384309 CTAGTAGAATGCCCGTGCGA 59.616 55.000 0.00 0.00 41.78 5.10
3093 4814 9.074576 CCCATTGCATATATAGACATAATGCAT 57.925 33.333 8.89 0.00 42.13 3.96
3094 4815 9.893305 CCATTGCATATATAGACATAATGCATG 57.107 33.333 0.00 9.10 42.13 4.06
3132 4853 4.142403 CCTTTACCATGATGCACGTCAAAT 60.142 41.667 0.00 0.00 0.00 2.32
3143 4864 6.799441 TGATGCACGTCAAATTTTGTATGTAC 59.201 34.615 8.89 0.00 0.00 2.90
3181 4902 9.418045 CCCGTAACAATCAATCAAAAAGTAATT 57.582 29.630 0.00 0.00 0.00 1.40
3262 4983 4.951715 ACATAGAGCAAAGCAATGATCCAA 59.048 37.500 3.73 0.00 36.40 3.53
3271 4992 8.139989 AGCAAAGCAATGATCCAACTAATTATC 58.860 33.333 0.00 0.00 0.00 1.75
3273 4994 9.459640 CAAAGCAATGATCCAACTAATTATCTG 57.540 33.333 0.00 0.00 0.00 2.90
3314 5035 5.645929 ACTTGATGCATTCCGTACAATGTTA 59.354 36.000 0.00 0.00 36.32 2.41
3332 5053 7.224557 ACAATGTTAGAATTGTTGTCTTTTGCC 59.775 33.333 0.00 0.00 46.19 4.52
3337 5058 8.915654 GTTAGAATTGTTGTCTTTTGCCTAATG 58.084 33.333 0.00 0.00 0.00 1.90
3345 5066 6.040209 TGTCTTTTGCCTAATGATTTGCAT 57.960 33.333 3.45 0.00 39.43 3.96
3348 5069 2.894763 TGCCTAATGATTTGCATGGC 57.105 45.000 0.00 0.00 43.13 4.40
3497 5218 5.360144 GCTACCCCTTTCTCCTTTTATTTCC 59.640 44.000 0.00 0.00 0.00 3.13
3542 5263 1.544724 ACTCCTCTCACTCACTCAGC 58.455 55.000 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.736721 TCTGTTAGAAGCAATCACGCAC 59.263 45.455 0.00 0.00 0.00 5.34
2 3 2.996621 ACTCTGTTAGAAGCAATCACGC 59.003 45.455 0.00 0.00 0.00 5.34
3 4 4.489810 AGACTCTGTTAGAAGCAATCACG 58.510 43.478 0.00 0.00 0.00 4.35
4 5 8.410141 ACTATAGACTCTGTTAGAAGCAATCAC 58.590 37.037 6.78 0.00 0.00 3.06
6 7 8.625651 TCACTATAGACTCTGTTAGAAGCAATC 58.374 37.037 6.78 0.00 0.00 2.67
7 8 8.526667 TCACTATAGACTCTGTTAGAAGCAAT 57.473 34.615 6.78 0.00 0.00 3.56
8 9 7.829706 TCTCACTATAGACTCTGTTAGAAGCAA 59.170 37.037 6.78 0.00 0.00 3.91
9 10 7.339482 TCTCACTATAGACTCTGTTAGAAGCA 58.661 38.462 6.78 0.00 0.00 3.91
10 11 7.795482 TCTCACTATAGACTCTGTTAGAAGC 57.205 40.000 6.78 0.00 0.00 3.86
12 13 9.344772 GGAATCTCACTATAGACTCTGTTAGAA 57.655 37.037 6.78 0.00 0.00 2.10
13 14 8.495260 TGGAATCTCACTATAGACTCTGTTAGA 58.505 37.037 6.78 0.00 0.00 2.10
14 15 8.684386 TGGAATCTCACTATAGACTCTGTTAG 57.316 38.462 6.78 0.00 0.00 2.34
15 16 8.904834 GTTGGAATCTCACTATAGACTCTGTTA 58.095 37.037 6.78 0.00 0.00 2.41
16 17 7.397476 TGTTGGAATCTCACTATAGACTCTGTT 59.603 37.037 6.78 0.00 0.00 3.16
17 18 6.892456 TGTTGGAATCTCACTATAGACTCTGT 59.108 38.462 6.78 0.00 0.00 3.41
18 19 7.148000 TGTGTTGGAATCTCACTATAGACTCTG 60.148 40.741 6.78 0.00 33.82 3.35
19 20 6.892456 TGTGTTGGAATCTCACTATAGACTCT 59.108 38.462 6.78 0.00 33.82 3.24
20 21 7.101652 TGTGTTGGAATCTCACTATAGACTC 57.898 40.000 6.78 0.00 33.82 3.36
21 22 7.482169 TTGTGTTGGAATCTCACTATAGACT 57.518 36.000 6.78 0.00 33.82 3.24
22 23 8.547967 TTTTGTGTTGGAATCTCACTATAGAC 57.452 34.615 6.78 0.00 33.82 2.59
23 24 9.219603 CTTTTTGTGTTGGAATCTCACTATAGA 57.780 33.333 6.78 0.00 33.82 1.98
24 25 9.219603 TCTTTTTGTGTTGGAATCTCACTATAG 57.780 33.333 0.00 0.00 33.82 1.31
25 26 9.739276 ATCTTTTTGTGTTGGAATCTCACTATA 57.261 29.630 0.00 0.00 33.82 1.31
26 27 8.641498 ATCTTTTTGTGTTGGAATCTCACTAT 57.359 30.769 0.00 0.00 33.82 2.12
27 28 8.352201 CAATCTTTTTGTGTTGGAATCTCACTA 58.648 33.333 0.00 0.00 33.82 2.74
28 29 6.966534 ATCTTTTTGTGTTGGAATCTCACT 57.033 33.333 0.00 0.00 33.82 3.41
40 41 3.070015 CCTCAAGGCCAATCTTTTTGTGT 59.930 43.478 5.01 0.00 0.00 3.72
81 82 0.396278 TGACATGTGTTGTTGGGGCA 60.396 50.000 1.15 0.00 39.18 5.36
98 99 1.272037 TGTCCTTGCCTTGCATCATGA 60.272 47.619 0.00 0.00 38.76 3.07
112 113 2.039084 AGACGAGATTTGGCTTGTCCTT 59.961 45.455 0.00 0.00 46.15 3.36
133 134 1.522092 CCGCCTAACATCTCCTGCA 59.478 57.895 0.00 0.00 0.00 4.41
134 135 1.889573 GCCGCCTAACATCTCCTGC 60.890 63.158 0.00 0.00 0.00 4.85
135 136 0.107703 TTGCCGCCTAACATCTCCTG 60.108 55.000 0.00 0.00 0.00 3.86
159 160 6.655062 TGTATTGTCAAAAACTTGCGAGTAG 58.345 36.000 7.13 0.00 34.21 2.57
165 166 9.848172 CAATAACTTGTATTGTCAAAAACTTGC 57.152 29.630 0.00 0.00 32.02 4.01
244 246 8.826710 TGTGATTTCTTATCGATTTATGGTGTC 58.173 33.333 1.71 0.00 0.00 3.67
272 274 7.576403 TGATCACTGAGAATTGATTTATGGGA 58.424 34.615 0.00 0.00 32.43 4.37
287 289 3.675225 CGTGGTGTAGTTTGATCACTGAG 59.325 47.826 0.00 0.00 33.30 3.35
334 336 7.016858 GTCTACCTTGGGTATGTGGGATATTTA 59.983 40.741 0.00 0.00 37.56 1.40
363 365 0.608856 ACCCGTTCATCATGCTTGCA 60.609 50.000 0.00 0.00 0.00 4.08
376 379 5.710099 AGAATGTACATTTTCATCACCCGTT 59.290 36.000 21.63 0.00 0.00 4.44
379 382 5.220854 CGGAGAATGTACATTTTCATCACCC 60.221 44.000 29.76 17.10 34.63 4.61
509 512 4.792068 AGATATTTTCCATTTCCGCTCCA 58.208 39.130 0.00 0.00 0.00 3.86
512 515 9.220767 GATTACTAGATATTTTCCATTTCCGCT 57.779 33.333 0.00 0.00 0.00 5.52
557 562 7.710907 TGATACCAGAAATAAGGAACAATCTCG 59.289 37.037 0.00 0.00 0.00 4.04
625 677 5.128919 GCTGGTCTGTGGATCTATGATTTT 58.871 41.667 0.00 0.00 0.00 1.82
646 698 3.243724 GTGATTAGTGAGGGATAGGGCT 58.756 50.000 0.00 0.00 0.00 5.19
674 726 9.373603 TGAGATGCCAAAATTTGATTAGAAATG 57.626 29.630 7.37 0.00 0.00 2.32
709 761 2.449137 ATTTCCCCTCTGCCAATCAG 57.551 50.000 0.00 0.00 44.21 2.90
849 902 4.898265 TCAAACTGTCATTTGGGATTTCCA 59.102 37.500 0.00 0.00 45.43 3.53
850 903 5.221422 TGTCAAACTGTCATTTGGGATTTCC 60.221 40.000 0.00 0.00 39.57 3.13
851 904 5.841810 TGTCAAACTGTCATTTGGGATTTC 58.158 37.500 0.00 0.00 39.57 2.17
853 906 6.947733 TCTATGTCAAACTGTCATTTGGGATT 59.052 34.615 0.00 0.00 39.57 3.01
854 907 6.484288 TCTATGTCAAACTGTCATTTGGGAT 58.516 36.000 0.00 0.00 39.57 3.85
906 970 9.013229 CAATGCAAGATGCTTAATTAGGGTATA 57.987 33.333 3.78 0.00 45.31 1.47
908 972 6.833416 ACAATGCAAGATGCTTAATTAGGGTA 59.167 34.615 3.78 0.00 45.31 3.69
909 973 5.658190 ACAATGCAAGATGCTTAATTAGGGT 59.342 36.000 3.78 0.00 45.31 4.34
910 974 6.152932 ACAATGCAAGATGCTTAATTAGGG 57.847 37.500 3.78 0.00 45.31 3.53
911 975 7.934457 AGTACAATGCAAGATGCTTAATTAGG 58.066 34.615 3.78 0.00 45.31 2.69
912 976 9.229784 CAAGTACAATGCAAGATGCTTAATTAG 57.770 33.333 3.78 0.00 45.31 1.73
913 977 8.739039 ACAAGTACAATGCAAGATGCTTAATTA 58.261 29.630 3.78 0.00 45.31 1.40
916 980 6.573664 ACAAGTACAATGCAAGATGCTTAA 57.426 33.333 3.78 0.00 45.31 1.85
917 981 6.183360 CGTACAAGTACAATGCAAGATGCTTA 60.183 38.462 10.63 0.00 38.91 3.09
919 983 4.093408 CGTACAAGTACAATGCAAGATGCT 59.907 41.667 10.63 0.00 38.91 3.79
920 984 4.092821 TCGTACAAGTACAATGCAAGATGC 59.907 41.667 10.63 0.00 38.74 3.91
921 985 5.220472 CCTCGTACAAGTACAATGCAAGATG 60.220 44.000 10.63 0.00 35.87 2.90
922 986 4.870426 CCTCGTACAAGTACAATGCAAGAT 59.130 41.667 10.63 0.00 35.87 2.40
924 988 3.370978 CCCTCGTACAAGTACAATGCAAG 59.629 47.826 10.63 0.00 35.87 4.01
930 994 1.337447 GCAGCCCTCGTACAAGTACAA 60.337 52.381 10.63 0.00 35.87 2.41
931 995 0.245539 GCAGCCCTCGTACAAGTACA 59.754 55.000 10.63 0.00 35.87 2.90
933 997 0.961857 TCGCAGCCCTCGTACAAGTA 60.962 55.000 0.00 0.00 0.00 2.24
934 998 2.214181 CTCGCAGCCCTCGTACAAGT 62.214 60.000 0.00 0.00 0.00 3.16
935 999 1.517257 CTCGCAGCCCTCGTACAAG 60.517 63.158 0.00 0.00 0.00 3.16
936 1000 2.571757 CTCGCAGCCCTCGTACAA 59.428 61.111 0.00 0.00 0.00 2.41
937 1001 4.129737 GCTCGCAGCCCTCGTACA 62.130 66.667 0.00 0.00 34.48 2.90
938 1002 2.907897 AATGCTCGCAGCCCTCGTAC 62.908 60.000 0.00 0.00 41.51 3.67
939 1003 2.238847 AAATGCTCGCAGCCCTCGTA 62.239 55.000 0.00 0.00 41.51 3.43
940 1004 3.612247 AAATGCTCGCAGCCCTCGT 62.612 57.895 0.00 0.00 41.51 4.18
941 1005 2.817423 GAAATGCTCGCAGCCCTCG 61.817 63.158 0.00 0.00 41.51 4.63
942 1006 2.476320 GGAAATGCTCGCAGCCCTC 61.476 63.158 0.00 1.03 41.51 4.30
944 1008 2.751436 TGGAAATGCTCGCAGCCC 60.751 61.111 0.00 0.00 41.51 5.19
945 1009 1.589716 AACTGGAAATGCTCGCAGCC 61.590 55.000 0.00 0.00 41.51 4.85
947 1011 2.589014 GAAAACTGGAAATGCTCGCAG 58.411 47.619 0.00 0.00 0.00 5.18
949 1013 1.269448 TGGAAAACTGGAAATGCTCGC 59.731 47.619 0.00 0.00 0.00 5.03
950 1014 2.351738 GGTGGAAAACTGGAAATGCTCG 60.352 50.000 0.00 0.00 0.00 5.03
951 1015 2.893489 AGGTGGAAAACTGGAAATGCTC 59.107 45.455 0.00 0.00 0.00 4.26
953 1017 2.893489 AGAGGTGGAAAACTGGAAATGC 59.107 45.455 0.00 0.00 0.00 3.56
955 1019 3.140144 TGGAGAGGTGGAAAACTGGAAAT 59.860 43.478 0.00 0.00 0.00 2.17
958 1022 1.420138 GTGGAGAGGTGGAAAACTGGA 59.580 52.381 0.00 0.00 0.00 3.86
962 1026 1.070289 AGACGTGGAGAGGTGGAAAAC 59.930 52.381 0.00 0.00 0.00 2.43
963 1027 1.070134 CAGACGTGGAGAGGTGGAAAA 59.930 52.381 0.00 0.00 0.00 2.29
1274 2891 2.046892 CCTTGAGCAGGTCCACCG 60.047 66.667 0.00 0.00 42.08 4.94
1284 2901 1.796796 GTCGAATGCCACCTTGAGC 59.203 57.895 0.00 0.00 0.00 4.26
1353 2978 4.695231 AACTCCGTCGCACCGTCG 62.695 66.667 0.00 0.00 38.02 5.12
1390 3015 0.659417 TGTGCGAAGTCGACGAAGAC 60.659 55.000 10.46 5.46 43.02 3.01
1447 3072 2.297033 ACGCAAGCATGAATGGAAAAGT 59.703 40.909 0.00 0.00 45.62 2.66
1458 3091 2.803670 GCACAGCACGCAAGCATG 60.804 61.111 0.00 0.00 45.62 4.06
1459 3092 3.263503 CTGCACAGCACGCAAGCAT 62.264 57.895 0.00 0.00 39.30 3.79
1460 3093 3.956317 CTGCACAGCACGCAAGCA 61.956 61.111 0.00 0.00 39.30 3.91
1461 3094 3.868951 GACTGCACAGCACGCAAGC 62.869 63.158 0.00 0.00 39.30 4.01
1462 3095 1.848932 ATGACTGCACAGCACGCAAG 61.849 55.000 0.00 0.00 39.30 4.01
1463 3096 1.893335 ATGACTGCACAGCACGCAA 60.893 52.632 0.00 0.00 39.30 4.85
1464 3097 2.281002 ATGACTGCACAGCACGCA 60.281 55.556 0.00 0.00 37.88 5.24
1465 3098 2.175078 CATGACTGCACAGCACGC 59.825 61.111 0.00 0.00 33.79 5.34
1466 3099 2.865308 CCATGACTGCACAGCACG 59.135 61.111 0.00 0.00 33.79 5.34
1469 3102 3.031964 GACGCCATGACTGCACAGC 62.032 63.158 0.00 0.00 0.00 4.40
1471 3104 2.358615 GGACGCCATGACTGCACA 60.359 61.111 0.00 0.00 0.00 4.57
1472 3105 2.046892 AGGACGCCATGACTGCAC 60.047 61.111 0.00 0.00 0.00 4.57
1473 3106 2.265739 GAGGACGCCATGACTGCA 59.734 61.111 0.00 0.00 0.00 4.41
1474 3107 2.512515 GGAGGACGCCATGACTGC 60.513 66.667 0.00 0.00 0.00 4.40
1475 3108 1.976132 ATGGGAGGACGCCATGACTG 61.976 60.000 0.00 0.00 0.00 3.51
1476 3109 1.690219 GATGGGAGGACGCCATGACT 61.690 60.000 0.00 0.00 30.95 3.41
1477 3110 1.227674 GATGGGAGGACGCCATGAC 60.228 63.158 0.00 0.00 30.95 3.06
1478 3111 2.443394 GGATGGGAGGACGCCATGA 61.443 63.158 0.00 0.00 30.95 3.07
1479 3112 2.111878 GGATGGGAGGACGCCATG 59.888 66.667 0.00 0.00 30.95 3.66
1480 3113 3.171388 GGGATGGGAGGACGCCAT 61.171 66.667 0.00 0.00 32.55 4.40
1482 3115 3.171388 ATGGGATGGGAGGACGCC 61.171 66.667 0.00 0.00 0.00 5.68
1483 3116 2.427753 GATGGGATGGGAGGACGC 59.572 66.667 0.00 0.00 0.00 5.19
1484 3117 1.337384 TGTGATGGGATGGGAGGACG 61.337 60.000 0.00 0.00 0.00 4.79
1485 3118 0.181350 GTGTGATGGGATGGGAGGAC 59.819 60.000 0.00 0.00 0.00 3.85
1486 3119 0.253113 TGTGTGATGGGATGGGAGGA 60.253 55.000 0.00 0.00 0.00 3.71
1487 3120 0.848735 ATGTGTGATGGGATGGGAGG 59.151 55.000 0.00 0.00 0.00 4.30
1526 3167 1.338337 TGACATCGGCTCTTAGCTAGC 59.662 52.381 6.62 6.62 41.99 3.42
1530 3171 1.863454 CACATGACATCGGCTCTTAGC 59.137 52.381 0.00 0.00 41.46 3.09
1531 3172 1.863454 GCACATGACATCGGCTCTTAG 59.137 52.381 0.00 0.00 0.00 2.18
1532 3173 1.802508 CGCACATGACATCGGCTCTTA 60.803 52.381 0.00 0.00 0.00 2.10
1533 3174 1.086067 CGCACATGACATCGGCTCTT 61.086 55.000 0.00 0.00 0.00 2.85
1534 3175 1.520120 CGCACATGACATCGGCTCT 60.520 57.895 0.00 0.00 0.00 4.09
1535 3176 1.811266 ACGCACATGACATCGGCTC 60.811 57.895 0.00 0.00 0.00 4.70
1536 3177 2.102438 CACGCACATGACATCGGCT 61.102 57.895 0.00 0.00 0.00 5.52
1538 3179 2.300597 CTGCACGCACATGACATCGG 62.301 60.000 0.00 0.00 0.00 4.18
1540 3181 1.300971 ACCTGCACGCACATGACATC 61.301 55.000 0.00 0.00 0.00 3.06
1542 3183 0.948623 GTACCTGCACGCACATGACA 60.949 55.000 0.00 0.00 0.00 3.58
1543 3184 1.635663 GGTACCTGCACGCACATGAC 61.636 60.000 4.06 0.00 0.00 3.06
1544 3185 1.375396 GGTACCTGCACGCACATGA 60.375 57.895 4.06 0.00 0.00 3.07
1545 3186 2.739704 CGGTACCTGCACGCACATG 61.740 63.158 10.90 0.00 0.00 3.21
1708 3362 0.400213 ATGTCCTTGGCCTCGTGAAA 59.600 50.000 3.32 0.00 0.00 2.69
1954 3632 1.701545 CTCTCGCTCTCGCTCTCGTT 61.702 60.000 0.00 0.00 36.96 3.85
2569 4290 1.823041 GAGAAGCAGGCCAGCCATC 60.823 63.158 17.68 15.36 38.92 3.51
2570 4291 2.274760 GAGAAGCAGGCCAGCCAT 59.725 61.111 17.68 6.07 38.92 4.40
2571 4292 4.399395 CGAGAAGCAGGCCAGCCA 62.399 66.667 17.68 0.00 38.92 4.75
2572 4293 4.400961 ACGAGAAGCAGGCCAGCC 62.401 66.667 17.68 0.00 34.23 4.85
2573 4294 3.123620 CACGAGAAGCAGGCCAGC 61.124 66.667 13.11 13.11 0.00 4.85
2574 4295 2.435586 CCACGAGAAGCAGGCCAG 60.436 66.667 5.01 0.00 0.00 4.85
2575 4296 4.020617 CCCACGAGAAGCAGGCCA 62.021 66.667 5.01 0.00 0.00 5.36
2577 4298 4.704833 TGCCCACGAGAAGCAGGC 62.705 66.667 0.00 0.00 40.62 4.85
2580 4301 2.031012 CACTGCCCACGAGAAGCA 59.969 61.111 0.00 0.00 34.79 3.91
2581 4302 1.739562 CTCACTGCCCACGAGAAGC 60.740 63.158 0.00 0.00 0.00 3.86
2582 4303 0.668706 CACTCACTGCCCACGAGAAG 60.669 60.000 0.00 0.00 0.00 2.85
2583 4304 1.367471 CACTCACTGCCCACGAGAA 59.633 57.895 0.00 0.00 0.00 2.87
2584 4305 3.051210 CACTCACTGCCCACGAGA 58.949 61.111 0.00 0.00 0.00 4.04
2585 4306 2.740055 GCACTCACTGCCCACGAG 60.740 66.667 0.00 0.00 40.42 4.18
2586 4307 4.662961 CGCACTCACTGCCCACGA 62.663 66.667 0.00 0.00 43.84 4.35
2587 4308 4.662961 TCGCACTCACTGCCCACG 62.663 66.667 0.00 0.00 43.84 4.94
2588 4309 2.740055 CTCGCACTCACTGCCCAC 60.740 66.667 0.00 0.00 43.84 4.61
2589 4310 2.917227 TCTCGCACTCACTGCCCA 60.917 61.111 0.00 0.00 43.84 5.36
2590 4311 1.595993 TACTCTCGCACTCACTGCCC 61.596 60.000 0.00 0.00 43.84 5.36
2591 4312 0.243907 TTACTCTCGCACTCACTGCC 59.756 55.000 0.00 0.00 43.84 4.85
2592 4313 2.285827 ATTACTCTCGCACTCACTGC 57.714 50.000 0.00 0.00 43.21 4.40
2593 4314 6.036470 TCATAAATTACTCTCGCACTCACTG 58.964 40.000 0.00 0.00 0.00 3.66
2594 4315 6.127591 ACTCATAAATTACTCTCGCACTCACT 60.128 38.462 0.00 0.00 0.00 3.41
2595 4316 6.037098 ACTCATAAATTACTCTCGCACTCAC 58.963 40.000 0.00 0.00 0.00 3.51
2596 4317 6.208988 ACTCATAAATTACTCTCGCACTCA 57.791 37.500 0.00 0.00 0.00 3.41
2597 4318 8.695284 CATTACTCATAAATTACTCTCGCACTC 58.305 37.037 0.00 0.00 0.00 3.51
2598 4319 7.169982 GCATTACTCATAAATTACTCTCGCACT 59.830 37.037 0.00 0.00 0.00 4.40
2599 4320 7.284351 GCATTACTCATAAATTACTCTCGCAC 58.716 38.462 0.00 0.00 0.00 5.34
2600 4321 6.423905 GGCATTACTCATAAATTACTCTCGCA 59.576 38.462 0.00 0.00 0.00 5.10
2601 4322 6.128526 GGGCATTACTCATAAATTACTCTCGC 60.129 42.308 0.00 0.00 0.00 5.03
2602 4323 6.929049 TGGGCATTACTCATAAATTACTCTCG 59.071 38.462 0.00 0.00 0.00 4.04
2603 4324 7.173390 GGTGGGCATTACTCATAAATTACTCTC 59.827 40.741 0.00 0.00 0.00 3.20
2604 4325 6.998673 GGTGGGCATTACTCATAAATTACTCT 59.001 38.462 0.00 0.00 0.00 3.24
2605 4326 6.206829 GGGTGGGCATTACTCATAAATTACTC 59.793 42.308 0.00 0.00 0.00 2.59
2606 4327 6.068670 GGGTGGGCATTACTCATAAATTACT 58.931 40.000 0.00 0.00 0.00 2.24
2607 4328 5.243060 GGGGTGGGCATTACTCATAAATTAC 59.757 44.000 0.00 0.00 0.00 1.89
2608 4329 5.103473 TGGGGTGGGCATTACTCATAAATTA 60.103 40.000 0.00 0.00 0.00 1.40
2609 4330 4.223144 GGGGTGGGCATTACTCATAAATT 58.777 43.478 0.00 0.00 0.00 1.82
2610 4331 3.206412 TGGGGTGGGCATTACTCATAAAT 59.794 43.478 0.00 0.00 0.00 1.40
2611 4332 2.583101 TGGGGTGGGCATTACTCATAAA 59.417 45.455 0.00 0.00 0.00 1.40
2612 4333 2.209758 TGGGGTGGGCATTACTCATAA 58.790 47.619 0.00 0.00 0.00 1.90
2613 4334 1.900254 TGGGGTGGGCATTACTCATA 58.100 50.000 0.00 0.00 0.00 2.15
2614 4335 1.133388 CATGGGGTGGGCATTACTCAT 60.133 52.381 0.00 0.00 0.00 2.90
2615 4336 0.258484 CATGGGGTGGGCATTACTCA 59.742 55.000 0.00 0.00 0.00 3.41
2616 4337 0.550914 TCATGGGGTGGGCATTACTC 59.449 55.000 0.00 0.00 0.00 2.59
2617 4338 1.006813 TTCATGGGGTGGGCATTACT 58.993 50.000 0.00 0.00 0.00 2.24
2618 4339 1.859302 TTTCATGGGGTGGGCATTAC 58.141 50.000 0.00 0.00 0.00 1.89
2619 4340 2.630889 TTTTCATGGGGTGGGCATTA 57.369 45.000 0.00 0.00 0.00 1.90
2620 4341 1.839354 GATTTTCATGGGGTGGGCATT 59.161 47.619 0.00 0.00 0.00 3.56
2621 4342 1.499368 GATTTTCATGGGGTGGGCAT 58.501 50.000 0.00 0.00 0.00 4.40
2622 4343 0.969917 CGATTTTCATGGGGTGGGCA 60.970 55.000 0.00 0.00 0.00 5.36
2623 4344 1.675720 CCGATTTTCATGGGGTGGGC 61.676 60.000 0.00 0.00 0.00 5.36
2624 4345 0.033601 TCCGATTTTCATGGGGTGGG 60.034 55.000 0.00 0.00 0.00 4.61
2625 4346 1.064758 TCTCCGATTTTCATGGGGTGG 60.065 52.381 0.00 0.00 0.00 4.61
2626 4347 2.418368 TCTCCGATTTTCATGGGGTG 57.582 50.000 0.00 0.00 0.00 4.61
2627 4348 2.576191 TCTTCTCCGATTTTCATGGGGT 59.424 45.455 0.00 0.00 0.00 4.95
2628 4349 3.209410 CTCTTCTCCGATTTTCATGGGG 58.791 50.000 0.00 0.00 0.00 4.96
2629 4350 3.118261 TCCTCTTCTCCGATTTTCATGGG 60.118 47.826 0.00 0.00 0.00 4.00
2630 4351 4.142609 TCCTCTTCTCCGATTTTCATGG 57.857 45.455 0.00 0.00 0.00 3.66
2631 4352 6.520272 ACTATCCTCTTCTCCGATTTTCATG 58.480 40.000 0.00 0.00 0.00 3.07
2632 4353 6.739331 ACTATCCTCTTCTCCGATTTTCAT 57.261 37.500 0.00 0.00 0.00 2.57
2633 4354 6.546428 AACTATCCTCTTCTCCGATTTTCA 57.454 37.500 0.00 0.00 0.00 2.69
2634 4355 7.718525 ACTAACTATCCTCTTCTCCGATTTTC 58.281 38.462 0.00 0.00 0.00 2.29
2635 4356 7.663043 ACTAACTATCCTCTTCTCCGATTTT 57.337 36.000 0.00 0.00 0.00 1.82
2636 4357 7.663043 AACTAACTATCCTCTTCTCCGATTT 57.337 36.000 0.00 0.00 0.00 2.17
2637 4358 7.342284 TCAAACTAACTATCCTCTTCTCCGATT 59.658 37.037 0.00 0.00 0.00 3.34
2638 4359 6.834451 TCAAACTAACTATCCTCTTCTCCGAT 59.166 38.462 0.00 0.00 0.00 4.18
2639 4360 6.185511 TCAAACTAACTATCCTCTTCTCCGA 58.814 40.000 0.00 0.00 0.00 4.55
2640 4361 6.319152 TCTCAAACTAACTATCCTCTTCTCCG 59.681 42.308 0.00 0.00 0.00 4.63
2641 4362 7.648039 TCTCAAACTAACTATCCTCTTCTCC 57.352 40.000 0.00 0.00 0.00 3.71
2642 4363 8.962679 TCTTCTCAAACTAACTATCCTCTTCTC 58.037 37.037 0.00 0.00 0.00 2.87
2643 4364 8.887264 TCTTCTCAAACTAACTATCCTCTTCT 57.113 34.615 0.00 0.00 0.00 2.85
2644 4365 9.744468 GATCTTCTCAAACTAACTATCCTCTTC 57.256 37.037 0.00 0.00 0.00 2.87
2645 4366 8.700973 GGATCTTCTCAAACTAACTATCCTCTT 58.299 37.037 0.00 0.00 0.00 2.85
2646 4367 8.065007 AGGATCTTCTCAAACTAACTATCCTCT 58.935 37.037 0.00 0.00 36.80 3.69
2647 4368 8.245195 AGGATCTTCTCAAACTAACTATCCTC 57.755 38.462 0.00 0.00 36.80 3.71
2648 4369 9.362151 CTAGGATCTTCTCAAACTAACTATCCT 57.638 37.037 0.00 0.00 42.47 3.24
2649 4370 9.138596 ACTAGGATCTTCTCAAACTAACTATCC 57.861 37.037 0.00 0.00 0.00 2.59
2651 4372 9.702253 TGACTAGGATCTTCTCAAACTAACTAT 57.298 33.333 0.00 0.00 0.00 2.12
2652 4373 9.179909 CTGACTAGGATCTTCTCAAACTAACTA 57.820 37.037 0.00 0.00 0.00 2.24
2653 4374 7.363443 GCTGACTAGGATCTTCTCAAACTAACT 60.363 40.741 0.00 0.00 0.00 2.24
2654 4375 6.754675 GCTGACTAGGATCTTCTCAAACTAAC 59.245 42.308 0.00 0.00 0.00 2.34
2655 4376 6.404844 CGCTGACTAGGATCTTCTCAAACTAA 60.405 42.308 0.00 0.00 0.00 2.24
2656 4377 5.066634 CGCTGACTAGGATCTTCTCAAACTA 59.933 44.000 0.00 0.00 0.00 2.24
2657 4378 4.142271 CGCTGACTAGGATCTTCTCAAACT 60.142 45.833 0.00 0.00 0.00 2.66
2658 4379 4.109050 CGCTGACTAGGATCTTCTCAAAC 58.891 47.826 0.00 0.00 0.00 2.93
2659 4380 3.764434 ACGCTGACTAGGATCTTCTCAAA 59.236 43.478 0.00 0.00 0.00 2.69
2660 4381 3.129462 CACGCTGACTAGGATCTTCTCAA 59.871 47.826 0.00 0.00 0.00 3.02
2661 4382 2.685388 CACGCTGACTAGGATCTTCTCA 59.315 50.000 0.00 0.00 0.00 3.27
2662 4383 2.685897 ACACGCTGACTAGGATCTTCTC 59.314 50.000 0.00 0.00 0.00 2.87
2663 4384 2.729194 ACACGCTGACTAGGATCTTCT 58.271 47.619 0.00 0.00 0.00 2.85
2664 4385 4.634184 TTACACGCTGACTAGGATCTTC 57.366 45.455 0.00 0.00 0.00 2.87
2665 4386 5.401531 TTTTACACGCTGACTAGGATCTT 57.598 39.130 0.00 0.00 0.00 2.40
2666 4387 5.169295 GTTTTTACACGCTGACTAGGATCT 58.831 41.667 0.00 0.00 0.00 2.75
2667 4388 4.927425 TGTTTTTACACGCTGACTAGGATC 59.073 41.667 0.00 0.00 0.00 3.36
2668 4389 4.890088 TGTTTTTACACGCTGACTAGGAT 58.110 39.130 0.00 0.00 0.00 3.24
2669 4390 4.325028 TGTTTTTACACGCTGACTAGGA 57.675 40.909 0.00 0.00 0.00 2.94
2670 4391 4.451096 ACATGTTTTTACACGCTGACTAGG 59.549 41.667 0.00 0.00 0.00 3.02
2671 4392 5.591643 ACATGTTTTTACACGCTGACTAG 57.408 39.130 0.00 0.00 0.00 2.57
2672 4393 7.346695 GTTTACATGTTTTTACACGCTGACTA 58.653 34.615 2.30 0.00 0.00 2.59
2673 4394 5.994887 TTACATGTTTTTACACGCTGACT 57.005 34.783 2.30 0.00 0.00 3.41
2674 4395 5.397240 GGTTTACATGTTTTTACACGCTGAC 59.603 40.000 2.30 0.00 0.00 3.51
2675 4396 5.297278 AGGTTTACATGTTTTTACACGCTGA 59.703 36.000 2.30 0.00 0.00 4.26
2676 4397 5.516090 AGGTTTACATGTTTTTACACGCTG 58.484 37.500 2.30 0.00 0.00 5.18
2677 4398 5.761165 AGGTTTACATGTTTTTACACGCT 57.239 34.783 2.30 0.00 0.00 5.07
2678 4399 6.253942 ACAAAGGTTTACATGTTTTTACACGC 59.746 34.615 2.30 0.00 0.00 5.34
2679 4400 7.743520 ACAAAGGTTTACATGTTTTTACACG 57.256 32.000 2.30 0.00 0.00 4.49
2704 4425 9.882996 CATCGCACTCACAATAATAATAAACAT 57.117 29.630 0.00 0.00 0.00 2.71
2705 4426 7.855409 GCATCGCACTCACAATAATAATAAACA 59.145 33.333 0.00 0.00 0.00 2.83
2706 4427 8.070171 AGCATCGCACTCACAATAATAATAAAC 58.930 33.333 0.00 0.00 0.00 2.01
2707 4428 8.153479 AGCATCGCACTCACAATAATAATAAA 57.847 30.769 0.00 0.00 0.00 1.40
2708 4429 7.728847 AGCATCGCACTCACAATAATAATAA 57.271 32.000 0.00 0.00 0.00 1.40
2709 4430 7.728847 AAGCATCGCACTCACAATAATAATA 57.271 32.000 0.00 0.00 0.00 0.98
2710 4431 6.624352 AAGCATCGCACTCACAATAATAAT 57.376 33.333 0.00 0.00 0.00 1.28
2711 4432 6.761242 ACTAAGCATCGCACTCACAATAATAA 59.239 34.615 0.00 0.00 0.00 1.40
2712 4433 6.280643 ACTAAGCATCGCACTCACAATAATA 58.719 36.000 0.00 0.00 0.00 0.98
2713 4434 5.118990 ACTAAGCATCGCACTCACAATAAT 58.881 37.500 0.00 0.00 0.00 1.28
2714 4435 4.503910 ACTAAGCATCGCACTCACAATAA 58.496 39.130 0.00 0.00 0.00 1.40
2715 4436 4.123497 ACTAAGCATCGCACTCACAATA 57.877 40.909 0.00 0.00 0.00 1.90
2716 4437 2.977914 ACTAAGCATCGCACTCACAAT 58.022 42.857 0.00 0.00 0.00 2.71
2717 4438 2.455674 ACTAAGCATCGCACTCACAA 57.544 45.000 0.00 0.00 0.00 3.33
2718 4439 3.586100 TTACTAAGCATCGCACTCACA 57.414 42.857 0.00 0.00 0.00 3.58
2719 4440 4.783450 GCATTTACTAAGCATCGCACTCAC 60.783 45.833 0.00 0.00 0.00 3.51
2720 4441 3.309682 GCATTTACTAAGCATCGCACTCA 59.690 43.478 0.00 0.00 0.00 3.41
2721 4442 3.557595 AGCATTTACTAAGCATCGCACTC 59.442 43.478 0.00 0.00 0.00 3.51
2722 4443 3.535561 AGCATTTACTAAGCATCGCACT 58.464 40.909 0.00 0.00 0.00 4.40
2723 4444 3.951979 AGCATTTACTAAGCATCGCAC 57.048 42.857 0.00 0.00 0.00 5.34
2724 4445 5.107491 CGAATAGCATTTACTAAGCATCGCA 60.107 40.000 0.00 0.00 0.00 5.10
2725 4446 5.107453 ACGAATAGCATTTACTAAGCATCGC 60.107 40.000 0.00 0.00 35.81 4.58
2726 4447 6.453643 ACGAATAGCATTTACTAAGCATCG 57.546 37.500 0.00 0.00 37.24 3.84
2727 4448 7.114529 ACGTACGAATAGCATTTACTAAGCATC 59.885 37.037 24.41 0.00 0.00 3.91
2728 4449 6.921857 ACGTACGAATAGCATTTACTAAGCAT 59.078 34.615 24.41 0.00 0.00 3.79
2729 4450 6.267817 ACGTACGAATAGCATTTACTAAGCA 58.732 36.000 24.41 0.00 0.00 3.91
2730 4451 6.744550 ACGTACGAATAGCATTTACTAAGC 57.255 37.500 24.41 0.00 0.00 3.09
2732 4453 9.864034 GTAGTACGTACGAATAGCATTTACTAA 57.136 33.333 24.41 2.93 0.00 2.24
2733 4454 9.261180 AGTAGTACGTACGAATAGCATTTACTA 57.739 33.333 24.41 15.85 36.66 1.82
2734 4455 8.147642 AGTAGTACGTACGAATAGCATTTACT 57.852 34.615 24.41 16.83 36.66 2.24
2735 4456 7.532209 GGAGTAGTACGTACGAATAGCATTTAC 59.468 40.741 24.41 10.33 36.66 2.01
2736 4457 7.307989 GGGAGTAGTACGTACGAATAGCATTTA 60.308 40.741 24.41 0.00 36.66 1.40
2737 4458 6.433766 GGAGTAGTACGTACGAATAGCATTT 58.566 40.000 24.41 0.00 36.66 2.32
2738 4459 5.049129 GGGAGTAGTACGTACGAATAGCATT 60.049 44.000 24.41 0.00 36.66 3.56
2739 4460 4.453819 GGGAGTAGTACGTACGAATAGCAT 59.546 45.833 24.41 0.00 36.66 3.79
2740 4461 3.809832 GGGAGTAGTACGTACGAATAGCA 59.190 47.826 24.41 0.00 36.66 3.49
2741 4462 4.061596 AGGGAGTAGTACGTACGAATAGC 58.938 47.826 24.41 8.88 36.66 2.97
2742 4463 5.404968 CAGAGGGAGTAGTACGTACGAATAG 59.595 48.000 24.41 0.00 36.66 1.73
2743 4464 5.163405 ACAGAGGGAGTAGTACGTACGAATA 60.163 44.000 24.41 8.44 36.66 1.75
2744 4465 4.125703 CAGAGGGAGTAGTACGTACGAAT 58.874 47.826 24.41 14.17 36.66 3.34
2745 4466 3.055819 ACAGAGGGAGTAGTACGTACGAA 60.056 47.826 24.41 9.67 36.66 3.85
2746 4467 2.497675 ACAGAGGGAGTAGTACGTACGA 59.502 50.000 24.41 12.33 36.66 3.43
2747 4468 2.898705 ACAGAGGGAGTAGTACGTACG 58.101 52.381 19.49 15.01 36.66 3.67
2748 4469 6.109359 TCTTTACAGAGGGAGTAGTACGTAC 58.891 44.000 18.10 18.10 0.00 3.67
2749 4470 6.299805 TCTTTACAGAGGGAGTAGTACGTA 57.700 41.667 0.00 0.00 0.00 3.57
2750 4471 5.171339 TCTTTACAGAGGGAGTAGTACGT 57.829 43.478 0.00 0.00 0.00 3.57
2751 4472 4.035441 GCTCTTTACAGAGGGAGTAGTACG 59.965 50.000 7.98 0.00 46.24 3.67
2752 4473 4.948621 TGCTCTTTACAGAGGGAGTAGTAC 59.051 45.833 7.98 0.00 46.24 2.73
2753 4474 5.188988 TGCTCTTTACAGAGGGAGTAGTA 57.811 43.478 7.98 0.00 46.24 1.82
2754 4475 4.048970 TGCTCTTTACAGAGGGAGTAGT 57.951 45.455 7.98 0.00 46.24 2.73
2755 4476 5.606348 AATGCTCTTTACAGAGGGAGTAG 57.394 43.478 7.98 0.00 46.24 2.57
2756 4477 6.895756 TCTAAATGCTCTTTACAGAGGGAGTA 59.104 38.462 7.98 0.00 46.24 2.59
2757 4478 4.917906 AAATGCTCTTTACAGAGGGAGT 57.082 40.909 7.98 0.00 46.24 3.85
2758 4479 6.227298 TCTAAATGCTCTTTACAGAGGGAG 57.773 41.667 7.98 0.00 46.24 4.30
2759 4480 6.814954 ATCTAAATGCTCTTTACAGAGGGA 57.185 37.500 7.98 0.00 46.24 4.20
2760 4481 8.964476 TTTATCTAAATGCTCTTTACAGAGGG 57.036 34.615 7.98 0.00 46.24 4.30
2836 4557 8.816640 AACAAAAGAATCGTGCATAGATTTTT 57.183 26.923 17.60 15.65 38.32 1.94
2837 4558 8.816640 AAACAAAAGAATCGTGCATAGATTTT 57.183 26.923 17.60 11.63 38.32 1.82
2838 4559 8.816640 AAAACAAAAGAATCGTGCATAGATTT 57.183 26.923 17.60 8.40 38.32 2.17
2839 4560 8.816640 AAAAACAAAAGAATCGTGCATAGATT 57.183 26.923 16.86 16.86 40.63 2.40
2861 4582 3.243501 GCTTCTGTGCTGATGTCCAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
2862 4583 2.294233 GCTTCTGTGCTGATGTCCAAAA 59.706 45.455 0.00 0.00 0.00 2.44
2863 4584 1.881973 GCTTCTGTGCTGATGTCCAAA 59.118 47.619 0.00 0.00 0.00 3.28
2864 4585 1.202794 TGCTTCTGTGCTGATGTCCAA 60.203 47.619 0.00 0.00 0.00 3.53
2865 4586 0.397564 TGCTTCTGTGCTGATGTCCA 59.602 50.000 0.00 0.00 0.00 4.02
2866 4587 1.467734 CTTGCTTCTGTGCTGATGTCC 59.532 52.381 0.00 0.00 0.00 4.02
2867 4588 1.135746 GCTTGCTTCTGTGCTGATGTC 60.136 52.381 0.00 0.00 0.00 3.06
2868 4589 0.879765 GCTTGCTTCTGTGCTGATGT 59.120 50.000 0.00 0.00 0.00 3.06
2869 4590 0.179197 CGCTTGCTTCTGTGCTGATG 60.179 55.000 0.00 0.00 0.00 3.07
2870 4591 1.919956 GCGCTTGCTTCTGTGCTGAT 61.920 55.000 0.00 0.00 36.83 2.90
2871 4592 2.610694 GCGCTTGCTTCTGTGCTGA 61.611 57.895 0.00 0.00 36.83 4.26
2872 4593 2.126965 GCGCTTGCTTCTGTGCTG 60.127 61.111 0.00 0.00 36.83 4.41
2882 4603 0.111089 GCGTATGTATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
2883 4604 0.159554 CGCGTATGTATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
2884 4605 2.506544 CGCGTATGTATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
2885 4606 4.228451 CGCGTATGTATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
2888 4609 1.317611 CGTATGCGCGTATGTATGAGC 59.682 52.381 20.45 0.65 38.31 4.26
2902 4623 2.996621 GTTCATAGGGATGAGCGTATGC 59.003 50.000 0.00 0.00 43.03 3.14
2908 4629 1.221414 GTGCGTTCATAGGGATGAGC 58.779 55.000 0.00 0.00 43.03 4.26
2909 4630 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
2910 4631 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
2911 4632 2.022764 TGTGTGCGTTCATAGGGATG 57.977 50.000 0.00 0.00 0.00 3.51
2912 4633 2.564771 CATGTGTGCGTTCATAGGGAT 58.435 47.619 0.00 0.00 0.00 3.85
2913 4634 2.011548 GCATGTGTGCGTTCATAGGGA 61.012 52.381 0.00 0.00 42.28 4.20
2914 4635 0.378257 GCATGTGTGCGTTCATAGGG 59.622 55.000 0.00 0.00 42.28 3.53
2915 4636 3.903876 GCATGTGTGCGTTCATAGG 57.096 52.632 0.00 0.00 42.28 2.57
2925 4646 2.158711 AGGGATAGGATGTGCATGTGTG 60.159 50.000 0.00 0.00 0.00 3.82
2926 4647 2.130193 AGGGATAGGATGTGCATGTGT 58.870 47.619 0.00 0.00 0.00 3.72
2927 4648 2.945080 AGGGATAGGATGTGCATGTG 57.055 50.000 0.00 0.00 0.00 3.21
2928 4649 4.170449 TCATAGGGATAGGATGTGCATGT 58.830 43.478 0.00 0.00 0.00 3.21
2929 4650 4.767478 CTCATAGGGATAGGATGTGCATG 58.233 47.826 0.00 0.00 0.00 4.06
2930 4651 3.199508 GCTCATAGGGATAGGATGTGCAT 59.800 47.826 0.00 0.00 33.54 3.96
2931 4652 2.568956 GCTCATAGGGATAGGATGTGCA 59.431 50.000 0.00 0.00 33.54 4.57
2932 4653 2.417924 CGCTCATAGGGATAGGATGTGC 60.418 54.545 0.00 0.00 0.00 4.57
2933 4654 2.417924 GCGCTCATAGGGATAGGATGTG 60.418 54.545 0.00 0.00 0.00 3.21
2934 4655 1.827969 GCGCTCATAGGGATAGGATGT 59.172 52.381 0.00 0.00 0.00 3.06
2935 4656 1.137872 GGCGCTCATAGGGATAGGATG 59.862 57.143 7.64 0.00 0.00 3.51
2936 4657 1.007721 AGGCGCTCATAGGGATAGGAT 59.992 52.381 7.64 0.00 0.00 3.24
2937 4658 0.409876 AGGCGCTCATAGGGATAGGA 59.590 55.000 7.64 0.00 0.00 2.94
2938 4659 0.820871 GAGGCGCTCATAGGGATAGG 59.179 60.000 7.64 0.00 0.00 2.57
2939 4660 0.820871 GGAGGCGCTCATAGGGATAG 59.179 60.000 7.64 0.00 31.08 2.08
2940 4661 0.614979 GGGAGGCGCTCATAGGGATA 60.615 60.000 7.64 0.00 31.08 2.59
2941 4662 1.915769 GGGAGGCGCTCATAGGGAT 60.916 63.158 7.64 0.00 31.08 3.85
2942 4663 2.524394 GGGAGGCGCTCATAGGGA 60.524 66.667 7.64 0.00 31.08 4.20
2943 4664 2.844362 TGGGAGGCGCTCATAGGG 60.844 66.667 7.64 0.00 31.08 3.53
2944 4665 1.814772 CTCTGGGAGGCGCTCATAGG 61.815 65.000 7.64 0.00 31.08 2.57
2945 4666 0.825425 TCTCTGGGAGGCGCTCATAG 60.825 60.000 7.64 0.00 31.08 2.23
2946 4667 1.109920 GTCTCTGGGAGGCGCTCATA 61.110 60.000 7.64 0.00 31.08 2.15
2947 4668 2.042537 TCTCTGGGAGGCGCTCAT 60.043 61.111 7.64 0.00 31.08 2.90
2948 4669 3.071206 GTCTCTGGGAGGCGCTCA 61.071 66.667 7.64 0.00 31.08 4.26
2949 4670 2.757917 AGTCTCTGGGAGGCGCTC 60.758 66.667 7.64 2.45 39.53 5.03
2950 4671 3.073735 CAGTCTCTGGGAGGCGCT 61.074 66.667 7.64 0.00 39.53 5.92
2951 4672 3.071206 TCAGTCTCTGGGAGGCGC 61.071 66.667 0.00 0.00 39.53 6.53
2952 4673 3.074999 GCTCAGTCTCTGGGAGGCG 62.075 68.421 0.44 0.00 39.53 5.52
2953 4674 2.730524 GGCTCAGTCTCTGGGAGGC 61.731 68.421 0.44 0.00 45.11 4.70
2954 4675 2.422231 CGGCTCAGTCTCTGGGAGG 61.422 68.421 0.44 0.00 32.95 4.30
2955 4676 2.422231 CCGGCTCAGTCTCTGGGAG 61.422 68.421 0.44 0.00 32.95 4.30
2956 4677 2.363018 CCGGCTCAGTCTCTGGGA 60.363 66.667 0.44 0.00 32.95 4.37
2957 4678 4.154347 GCCGGCTCAGTCTCTGGG 62.154 72.222 22.15 0.00 34.60 4.45
2958 4679 2.729479 ATGCCGGCTCAGTCTCTGG 61.729 63.158 29.70 0.00 31.51 3.86
2959 4680 1.521010 CATGCCGGCTCAGTCTCTG 60.521 63.158 29.70 8.07 0.00 3.35
2960 4681 1.954362 GACATGCCGGCTCAGTCTCT 61.954 60.000 29.70 0.81 0.00 3.10
2961 4682 1.520342 GACATGCCGGCTCAGTCTC 60.520 63.158 29.70 9.51 0.00 3.36
2962 4683 1.620739 ATGACATGCCGGCTCAGTCT 61.621 55.000 31.39 20.84 0.00 3.24
2963 4684 1.153289 ATGACATGCCGGCTCAGTC 60.153 57.895 29.70 28.59 0.00 3.51
2964 4685 1.153289 GATGACATGCCGGCTCAGT 60.153 57.895 29.70 22.43 0.00 3.41
2965 4686 0.463295 AAGATGACATGCCGGCTCAG 60.463 55.000 29.70 19.20 0.00 3.35
2966 4687 0.745486 CAAGATGACATGCCGGCTCA 60.745 55.000 29.70 23.34 0.00 4.26
2967 4688 0.462581 TCAAGATGACATGCCGGCTC 60.463 55.000 29.70 17.89 0.00 4.70
2968 4689 0.035152 TTCAAGATGACATGCCGGCT 60.035 50.000 29.70 7.33 0.00 5.52
2969 4690 0.810648 TTTCAAGATGACATGCCGGC 59.189 50.000 22.73 22.73 0.00 6.13
2970 4691 3.788333 AATTTCAAGATGACATGCCGG 57.212 42.857 0.00 0.00 0.00 6.13
2971 4692 4.730042 CGTAAATTTCAAGATGACATGCCG 59.270 41.667 0.00 0.00 0.00 5.69
2972 4693 5.879237 TCGTAAATTTCAAGATGACATGCC 58.121 37.500 0.00 0.00 0.00 4.40
2973 4694 7.023575 ACTTCGTAAATTTCAAGATGACATGC 58.976 34.615 0.00 0.00 0.00 4.06
2974 4695 8.229811 TGACTTCGTAAATTTCAAGATGACATG 58.770 33.333 0.00 0.00 0.00 3.21
2975 4696 8.322906 TGACTTCGTAAATTTCAAGATGACAT 57.677 30.769 0.00 0.00 0.00 3.06
2976 4697 7.722795 TGACTTCGTAAATTTCAAGATGACA 57.277 32.000 0.00 0.26 0.00 3.58
2977 4698 7.217070 GCATGACTTCGTAAATTTCAAGATGAC 59.783 37.037 0.00 0.00 0.00 3.06
2978 4699 7.094848 TGCATGACTTCGTAAATTTCAAGATGA 60.095 33.333 0.00 0.00 0.00 2.92
2979 4700 7.022979 TGCATGACTTCGTAAATTTCAAGATG 58.977 34.615 0.00 0.00 0.00 2.90
2980 4701 7.144722 TGCATGACTTCGTAAATTTCAAGAT 57.855 32.000 0.00 0.00 0.00 2.40
2981 4702 6.552859 TGCATGACTTCGTAAATTTCAAGA 57.447 33.333 0.00 0.00 0.00 3.02
2982 4703 7.022979 TCATGCATGACTTCGTAAATTTCAAG 58.977 34.615 25.42 0.00 0.00 3.02
2983 4704 6.907741 TCATGCATGACTTCGTAAATTTCAA 58.092 32.000 25.42 0.00 0.00 2.69
2984 4705 6.493449 TCATGCATGACTTCGTAAATTTCA 57.507 33.333 25.42 0.00 0.00 2.69
2985 4706 7.912250 AGAATCATGCATGACTTCGTAAATTTC 59.088 33.333 30.92 23.26 40.03 2.17
2986 4707 7.765307 AGAATCATGCATGACTTCGTAAATTT 58.235 30.769 30.92 16.85 40.03 1.82
2987 4708 7.325660 AGAATCATGCATGACTTCGTAAATT 57.674 32.000 30.92 17.57 40.03 1.82
2988 4709 6.932356 AGAATCATGCATGACTTCGTAAAT 57.068 33.333 30.92 15.05 40.03 1.40
2989 4710 6.741992 AAGAATCATGCATGACTTCGTAAA 57.258 33.333 30.92 6.46 40.03 2.01
2990 4711 6.741992 AAAGAATCATGCATGACTTCGTAA 57.258 33.333 30.92 7.24 40.03 3.18
2991 4712 6.741992 AAAAGAATCATGCATGACTTCGTA 57.258 33.333 30.92 8.04 40.03 3.43
2992 4713 5.633830 AAAAGAATCATGCATGACTTCGT 57.366 34.783 30.92 25.26 40.03 3.85
3012 4733 5.122711 GCACGGGCATTCTACTAGTTAAAAA 59.877 40.000 3.77 0.00 40.72 1.94
3013 4734 4.632688 GCACGGGCATTCTACTAGTTAAAA 59.367 41.667 3.77 0.00 40.72 1.52
3014 4735 4.186159 GCACGGGCATTCTACTAGTTAAA 58.814 43.478 3.77 0.00 40.72 1.52
3015 4736 3.735820 CGCACGGGCATTCTACTAGTTAA 60.736 47.826 11.77 0.00 41.24 2.01
3016 4737 2.223641 CGCACGGGCATTCTACTAGTTA 60.224 50.000 11.77 0.00 41.24 2.24
3017 4738 1.470979 CGCACGGGCATTCTACTAGTT 60.471 52.381 11.77 0.00 41.24 2.24
3031 4752 3.891400 CCCATGGCAATCGCACGG 61.891 66.667 6.09 0.00 41.24 4.94
3045 4766 2.368221 CAAGAAAAAGTTCCATGGCCCA 59.632 45.455 6.96 0.00 33.92 5.36
3104 4825 4.279671 ACGTGCATCATGGTAAAGGAAAAA 59.720 37.500 0.00 0.00 0.00 1.94
3107 4828 3.006940 GACGTGCATCATGGTAAAGGAA 58.993 45.455 0.00 0.00 0.00 3.36
3108 4829 2.027653 TGACGTGCATCATGGTAAAGGA 60.028 45.455 0.00 0.00 0.00 3.36
3109 4830 2.355197 TGACGTGCATCATGGTAAAGG 58.645 47.619 0.00 0.00 0.00 3.11
3110 4831 4.418013 TTTGACGTGCATCATGGTAAAG 57.582 40.909 0.00 0.00 0.00 1.85
3111 4832 5.384063 AATTTGACGTGCATCATGGTAAA 57.616 34.783 0.00 0.00 0.00 2.01
3112 4833 5.384063 AAATTTGACGTGCATCATGGTAA 57.616 34.783 0.00 0.00 0.00 2.85
3113 4834 5.159925 CAAAATTTGACGTGCATCATGGTA 58.840 37.500 0.00 0.00 0.00 3.25
3132 4853 7.011950 CGGGCTATCATTTCTGTACATACAAAA 59.988 37.037 0.00 0.00 35.50 2.44
3143 4864 5.527214 TGATTGTTACGGGCTATCATTTCTG 59.473 40.000 0.00 0.00 0.00 3.02
3154 4875 5.227152 ACTTTTTGATTGATTGTTACGGGC 58.773 37.500 0.00 0.00 0.00 6.13
3181 4902 6.312399 ACATCGCAAGTGAAGTGAATTTTA 57.688 33.333 0.00 0.00 39.48 1.52
3231 4952 3.865164 TGCTTTGCTCTATGTACACATCG 59.135 43.478 0.00 0.00 37.76 3.84
3314 5035 7.288810 TCATTAGGCAAAAGACAACAATTCT 57.711 32.000 0.00 0.00 0.00 2.40
3332 5053 5.006261 CACATTGTGCCATGCAAATCATTAG 59.994 40.000 3.43 0.00 41.47 1.73
3337 5058 2.962125 TCACATTGTGCCATGCAAATC 58.038 42.857 12.04 0.00 41.47 2.17
3345 5066 2.353903 GGATGCAATTCACATTGTGCCA 60.354 45.455 12.04 1.62 41.84 4.92
3348 5069 3.924073 CACAGGATGCAATTCACATTGTG 59.076 43.478 10.64 10.64 42.53 3.33
3424 5145 7.336931 CACATAGCCTAACCAGTCATTTTTAGT 59.663 37.037 0.00 0.00 0.00 2.24
3427 5148 6.151144 GTCACATAGCCTAACCAGTCATTTTT 59.849 38.462 0.00 0.00 0.00 1.94
3464 5185 0.179045 AAAGGGGTAGCTGCTATGCG 60.179 55.000 13.20 0.00 38.13 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.