Multiple sequence alignment - TraesCS7B01G482100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G482100 chr7B 100.000 8181 0 0 1 8181 739926658 739934838 0.000000e+00 15108.0
1 TraesCS7B01G482100 chr7B 91.226 1060 65 13 4830 5875 739962494 739963539 0.000000e+00 1417.0
2 TraesCS7B01G482100 chr7D 92.735 4432 232 50 2487 6878 635848878 635844497 0.000000e+00 6318.0
3 TraesCS7B01G482100 chr7D 90.705 2270 118 36 4081 6308 635691723 635689505 0.000000e+00 2937.0
4 TraesCS7B01G482100 chr7D 90.436 2269 117 36 4081 6308 636307423 636309632 0.000000e+00 2896.0
5 TraesCS7B01G482100 chr7D 86.791 2574 193 66 1 2502 635851436 635848938 0.000000e+00 2734.0
6 TraesCS7B01G482100 chr7D 90.867 1281 81 21 5628 6885 635678309 635677042 0.000000e+00 1685.0
7 TraesCS7B01G482100 chr7D 90.859 1280 82 20 5628 6885 636329478 636330744 0.000000e+00 1683.0
8 TraesCS7B01G482100 chr7D 85.463 1307 97 34 6886 8123 635844538 635843256 0.000000e+00 1275.0
9 TraesCS7B01G482100 chr7D 85.413 1282 83 46 6890 8123 635677085 635675860 0.000000e+00 1236.0
10 TraesCS7B01G482100 chr7D 85.090 1281 86 50 6890 8123 636330701 636331923 0.000000e+00 1210.0
11 TraesCS7B01G482100 chr7D 85.864 955 90 23 5533 6450 636515139 636514193 0.000000e+00 974.0
12 TraesCS7B01G482100 chr7D 85.820 543 27 15 7551 8079 635689484 635688978 1.560000e-146 531.0
13 TraesCS7B01G482100 chr7D 86.034 537 25 15 7551 8073 636309653 636310153 1.560000e-146 531.0
14 TraesCS7B01G482100 chr7D 90.196 306 13 6 3389 3691 635711614 635711323 4.630000e-102 383.0
15 TraesCS7B01G482100 chr7D 89.216 306 16 6 3389 3691 636300210 636300501 4.670000e-97 366.0
16 TraesCS7B01G482100 chr7D 94.301 193 10 1 3835 4026 635707270 635707078 2.230000e-75 294.0
17 TraesCS7B01G482100 chr7D 100.000 29 0 0 8114 8142 615904263 615904291 4.000000e-03 54.7
18 TraesCS7B01G482100 chr7A 91.105 4373 245 70 2559 6884 729937408 729941683 0.000000e+00 5788.0
19 TraesCS7B01G482100 chr7A 87.948 2091 110 67 323 2334 729935102 729937129 0.000000e+00 2335.0
20 TraesCS7B01G482100 chr7A 87.231 1253 105 36 6893 8112 729941640 729942870 0.000000e+00 1376.0
21 TraesCS7B01G482100 chr7A 95.098 102 4 1 1706 1807 492926071 492925971 8.500000e-35 159.0
22 TraesCS7B01G482100 chr1B 80.069 582 82 20 4931 5500 680884162 680884721 1.280000e-107 401.0
23 TraesCS7B01G482100 chr1B 92.949 156 11 0 5600 5755 680884782 680884937 2.300000e-55 228.0
24 TraesCS7B01G482100 chr1B 95.890 73 3 0 1710 1782 144366363 144366291 1.440000e-22 119.0
25 TraesCS7B01G482100 chr1D 79.373 606 70 32 4931 5500 471291197 471291783 7.750000e-100 375.0
26 TraesCS7B01G482100 chr1D 92.308 65 5 0 6406 6470 495270171 495270235 8.740000e-15 93.5
27 TraesCS7B01G482100 chr3A 94.570 221 11 1 2487 2707 2973091 2973310 2.830000e-89 340.0
28 TraesCS7B01G482100 chr3A 94.570 221 11 1 2487 2707 3492998 3493217 2.830000e-89 340.0
29 TraesCS7B01G482100 chr3A 94.570 221 11 1 2487 2707 5546066 5546285 2.830000e-89 340.0
30 TraesCS7B01G482100 chr3A 94.118 221 12 1 2487 2707 4547275 4547494 1.320000e-87 335.0
31 TraesCS7B01G482100 chr3A 94.118 221 12 1 2487 2707 5010518 5010737 1.320000e-87 335.0
32 TraesCS7B01G482100 chr3A 94.495 218 11 1 2490 2707 13988314 13988098 1.320000e-87 335.0
33 TraesCS7B01G482100 chr3A 91.837 49 3 1 8131 8178 99426224 99426272 5.300000e-07 67.6
34 TraesCS7B01G482100 chr2D 94.954 218 10 1 2490 2707 647316621 647316405 2.830000e-89 340.0
35 TraesCS7B01G482100 chr2D 91.525 59 4 1 8120 8178 187642042 187641985 6.810000e-11 80.5
36 TraesCS7B01G482100 chr2A 94.495 218 10 2 2490 2707 699884725 699884510 1.320000e-87 335.0
37 TraesCS7B01G482100 chr2A 91.837 49 3 1 8131 8178 39327466 39327418 5.300000e-07 67.6
38 TraesCS7B01G482100 chr2A 91.837 49 3 1 8131 8178 200620189 200620141 5.300000e-07 67.6
39 TraesCS7B01G482100 chr5A 85.957 235 29 2 2123 2357 18685973 18686203 1.760000e-61 248.0
40 TraesCS7B01G482100 chr5A 100.000 28 0 0 7092 7119 124505288 124505315 1.500000e-02 52.8
41 TraesCS7B01G482100 chr5A 100.000 28 0 0 8115 8142 353601796 353601769 1.500000e-02 52.8
42 TraesCS7B01G482100 chr5D 96.939 98 3 0 1710 1807 203945758 203945855 1.830000e-36 165.0
43 TraesCS7B01G482100 chr5D 93.750 48 2 1 8131 8177 231356322 231356275 4.100000e-08 71.3
44 TraesCS7B01G482100 chr5D 94.737 38 2 0 2022 2059 526730277 526730314 8.870000e-05 60.2
45 TraesCS7B01G482100 chr4A 94.845 97 5 0 1710 1806 296243191 296243095 1.420000e-32 152.0
46 TraesCS7B01G482100 chr4A 90.323 62 4 2 8115 8175 614706424 614706364 6.810000e-11 80.5
47 TraesCS7B01G482100 chrUn 74.095 359 75 15 3896 4245 74813005 74813354 1.850000e-26 132.0
48 TraesCS7B01G482100 chr4B 90.909 55 5 0 2437 2491 575893341 575893395 3.170000e-09 75.0
49 TraesCS7B01G482100 chr5B 90.385 52 3 2 8131 8180 701055925 701055874 5.300000e-07 67.6
50 TraesCS7B01G482100 chr1A 91.837 49 3 1 8131 8178 511001549 511001597 5.300000e-07 67.6
51 TraesCS7B01G482100 chr3D 87.500 56 3 2 8120 8175 19538006 19538057 2.470000e-05 62.1
52 TraesCS7B01G482100 chr3B 92.857 42 3 0 2018 2059 790136723 790136682 2.470000e-05 62.1
53 TraesCS7B01G482100 chr2B 90.476 42 4 0 2018 2059 316181535 316181494 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G482100 chr7B 739926658 739934838 8180 False 15108.000000 15108 100.000000 1 8181 1 chr7B.!!$F1 8180
1 TraesCS7B01G482100 chr7B 739962494 739963539 1045 False 1417.000000 1417 91.226000 4830 5875 1 chr7B.!!$F2 1045
2 TraesCS7B01G482100 chr7D 635843256 635851436 8180 True 3442.333333 6318 88.329667 1 8123 3 chr7D.!!$R6 8122
3 TraesCS7B01G482100 chr7D 635688978 635691723 2745 True 1734.000000 2937 88.262500 4081 8079 2 chr7D.!!$R5 3998
4 TraesCS7B01G482100 chr7D 636307423 636310153 2730 False 1713.500000 2896 88.235000 4081 8073 2 chr7D.!!$F3 3992
5 TraesCS7B01G482100 chr7D 635675860 635678309 2449 True 1460.500000 1685 88.140000 5628 8123 2 chr7D.!!$R4 2495
6 TraesCS7B01G482100 chr7D 636329478 636331923 2445 False 1446.500000 1683 87.974500 5628 8123 2 chr7D.!!$F4 2495
7 TraesCS7B01G482100 chr7D 636514193 636515139 946 True 974.000000 974 85.864000 5533 6450 1 chr7D.!!$R3 917
8 TraesCS7B01G482100 chr7A 729935102 729942870 7768 False 3166.333333 5788 88.761333 323 8112 3 chr7A.!!$F1 7789
9 TraesCS7B01G482100 chr1B 680884162 680884937 775 False 314.500000 401 86.509000 4931 5755 2 chr1B.!!$F1 824
10 TraesCS7B01G482100 chr1D 471291197 471291783 586 False 375.000000 375 79.373000 4931 5500 1 chr1D.!!$F1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
218 230 0.037697 CAACCCTTGATCCACGACGA 60.038 55.000 0.00 0.00 0.00 4.20 F
257 269 0.179045 AGAGCAGCCGAACAAACACT 60.179 50.000 0.00 0.00 0.00 3.55 F
258 270 0.235926 GAGCAGCCGAACAAACACTC 59.764 55.000 0.00 0.00 0.00 3.51 F
1560 1693 0.250295 TGAAGGCGAACCACTTCCTG 60.250 55.000 0.00 0.00 41.78 3.86 F
1848 1981 0.254178 CTCCTCCTCAACCACCATGG 59.746 60.000 11.19 11.19 45.02 3.66 F
1851 1984 0.679002 CTCCTCAACCACCATGGCTG 60.679 60.000 13.04 9.45 42.67 4.85 F
3057 3327 0.803768 CGCTGACATTCACTCGAGGG 60.804 60.000 18.41 14.07 0.00 4.30 F
3850 4122 0.464916 ACCTTTCACGGCGAAACCTT 60.465 50.000 16.62 0.00 38.72 3.50 F
4555 4839 0.391927 AACAGCCGTAATAGCGCCAA 60.392 50.000 2.29 0.00 34.64 4.52 F
5925 6277 1.211457 AGGTATGCTCCCTTGCAGAAG 59.789 52.381 0.00 0.00 46.71 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 2002 0.179225 CGGTCAGAAACGAAATGCCG 60.179 55.000 0.0 0.0 0.00 5.69 R
1897 2030 0.602638 TCACGCCTGGAACATCACAC 60.603 55.000 0.0 0.0 38.20 3.82 R
1908 2041 1.444553 GAACGTCCTCTCACGCCTG 60.445 63.158 0.0 0.0 43.93 4.85 R
3161 3431 0.381801 CGTCTTGCAACAAAGCCACT 59.618 50.000 0.0 0.0 0.00 4.00 R
3162 3432 0.594796 CCGTCTTGCAACAAAGCCAC 60.595 55.000 0.0 0.0 0.00 5.01 R
3164 3434 0.948678 TACCGTCTTGCAACAAAGCC 59.051 50.000 0.0 0.0 0.00 4.35 R
4332 4611 2.158856 TCTCATCTCATGCACCATCCAC 60.159 50.000 0.0 0.0 0.00 4.02 R
5817 6167 1.232119 CATGTGCAGCAGAGTGTGAA 58.768 50.000 0.0 0.0 0.00 3.18 R
6330 6715 1.205417 GTGAGGGAAACATTGGCATGG 59.795 52.381 0.0 0.0 34.27 3.66 R
7914 8394 2.418976 GCTTACAAGGGTGAAATCGACC 59.581 50.000 0.0 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 4.202010 CCGCCCATCGTTCTTGATTTAATT 60.202 41.667 0.00 0.00 36.19 1.40
73 75 1.123077 GGGCCCATCTTTCCATTTCC 58.877 55.000 19.95 0.00 0.00 3.13
107 109 1.891150 ACGGTCCGTCTTGTTATCAGT 59.109 47.619 12.23 0.00 33.69 3.41
112 114 4.084013 GGTCCGTCTTGTTATCAGTTGTTG 60.084 45.833 0.00 0.00 0.00 3.33
120 122 7.595130 GTCTTGTTATCAGTTGTTGAAAATCCC 59.405 37.037 0.00 0.00 39.77 3.85
144 146 4.142902 CGAACAAAGATAAACCACGATGCT 60.143 41.667 0.00 0.00 0.00 3.79
146 148 4.323417 ACAAAGATAAACCACGATGCTGA 58.677 39.130 0.00 0.00 0.00 4.26
155 157 2.233676 ACCACGATGCTGACTACAATGA 59.766 45.455 0.00 0.00 0.00 2.57
157 159 3.253230 CACGATGCTGACTACAATGACA 58.747 45.455 0.00 0.00 0.00 3.58
171 173 7.892609 ACTACAATGACAGTTGATGTACTACA 58.107 34.615 0.00 0.00 44.17 2.74
172 174 8.364894 ACTACAATGACAGTTGATGTACTACAA 58.635 33.333 0.00 0.00 44.17 2.41
194 206 4.169059 TGTCTTGTTATGGGATGGATGG 57.831 45.455 0.00 0.00 0.00 3.51
213 225 1.410224 GGGATCCAACCCTTGATCCAC 60.410 57.143 15.23 6.20 45.90 4.02
215 227 1.209504 GATCCAACCCTTGATCCACGA 59.790 52.381 0.00 0.00 0.00 4.35
217 229 1.019278 CCAACCCTTGATCCACGACG 61.019 60.000 0.00 0.00 0.00 5.12
218 230 0.037697 CAACCCTTGATCCACGACGA 60.038 55.000 0.00 0.00 0.00 4.20
223 235 2.616960 CCTTGATCCACGACGATTTGA 58.383 47.619 0.00 0.00 0.00 2.69
227 239 4.857871 TGATCCACGACGATTTGATTTC 57.142 40.909 0.00 0.00 0.00 2.17
234 246 3.059044 ACGACGATTTGATTTCGAACGAG 59.941 43.478 0.00 0.00 39.74 4.18
237 249 3.985279 ACGATTTGATTTCGAACGAGACA 59.015 39.130 0.00 0.00 39.81 3.41
238 250 4.446385 ACGATTTGATTTCGAACGAGACAA 59.554 37.500 0.00 0.00 39.81 3.18
246 258 1.347817 CGAACGAGACAAGAGCAGCC 61.348 60.000 0.00 0.00 0.00 4.85
247 259 1.347817 GAACGAGACAAGAGCAGCCG 61.348 60.000 0.00 0.00 0.00 5.52
254 266 0.663153 ACAAGAGCAGCCGAACAAAC 59.337 50.000 0.00 0.00 0.00 2.93
255 267 0.662619 CAAGAGCAGCCGAACAAACA 59.337 50.000 0.00 0.00 0.00 2.83
256 268 0.663153 AAGAGCAGCCGAACAAACAC 59.337 50.000 0.00 0.00 0.00 3.32
257 269 0.179045 AGAGCAGCCGAACAAACACT 60.179 50.000 0.00 0.00 0.00 3.55
258 270 0.235926 GAGCAGCCGAACAAACACTC 59.764 55.000 0.00 0.00 0.00 3.51
260 272 1.444119 GCAGCCGAACAAACACTCCA 61.444 55.000 0.00 0.00 0.00 3.86
273 287 1.076332 CACTCCATCCGTTCGGAAAC 58.924 55.000 17.72 0.00 37.88 2.78
279 293 0.872388 ATCCGTTCGGAAACAAGTGC 59.128 50.000 17.72 0.00 37.88 4.40
282 296 1.370051 GTTCGGAAACAAGTGCCGC 60.370 57.895 9.16 0.00 44.45 6.53
288 302 0.308376 GAAACAAGTGCCGCGGTTTA 59.692 50.000 28.70 11.11 33.92 2.01
302 316 5.164129 GCCGCGGTTTAAGTTCAATAAAAAG 60.164 40.000 28.70 0.00 0.00 2.27
305 319 7.167801 CCGCGGTTTAAGTTCAATAAAAAGAAA 59.832 33.333 19.50 0.00 0.00 2.52
306 320 8.533153 CGCGGTTTAAGTTCAATAAAAAGAAAA 58.467 29.630 0.00 0.00 0.00 2.29
307 321 9.843874 GCGGTTTAAGTTCAATAAAAAGAAAAG 57.156 29.630 0.00 0.00 0.00 2.27
319 337 9.424659 CAATAAAAAGAAAAGATGCAACACAAC 57.575 29.630 0.00 0.00 0.00 3.32
324 342 5.045215 AGAAAAGATGCAACACAACACATG 58.955 37.500 0.00 0.00 0.00 3.21
378 397 3.299304 CTCCGTCGTCACGCGTACA 62.299 63.158 13.44 0.00 45.29 2.90
398 417 1.074889 AGCCACGGTGGGAAGTAATTT 59.925 47.619 27.41 0.00 38.19 1.82
412 431 7.492994 TGGGAAGTAATTTTAAGTTTGCACAAC 59.507 33.333 0.00 0.00 0.00 3.32
454 475 9.593134 AGATAATGAACACAGTAGAATGTCTTC 57.407 33.333 0.00 0.00 31.14 2.87
485 506 1.202394 GCAACCAGCACATGAACAACA 60.202 47.619 0.00 0.00 44.79 3.33
494 515 8.147058 ACCAGCACATGAACAACATAAATAAAA 58.853 29.630 0.00 0.00 37.46 1.52
541 562 8.519799 ACATAACCTACCAGGAATTACAAATG 57.480 34.615 0.00 0.00 37.67 2.32
552 573 6.976925 CAGGAATTACAAATGGCAGAGAAATC 59.023 38.462 0.00 0.00 0.00 2.17
577 601 2.180308 GGAGGAAATAGGAGGAGGAGGA 59.820 54.545 0.00 0.00 0.00 3.71
578 602 3.506398 GAGGAAATAGGAGGAGGAGGAG 58.494 54.545 0.00 0.00 0.00 3.69
579 603 2.181196 AGGAAATAGGAGGAGGAGGAGG 59.819 54.545 0.00 0.00 0.00 4.30
580 604 2.615391 GAAATAGGAGGAGGAGGAGGG 58.385 57.143 0.00 0.00 0.00 4.30
581 605 1.638959 AATAGGAGGAGGAGGAGGGT 58.361 55.000 0.00 0.00 0.00 4.34
582 606 1.638959 ATAGGAGGAGGAGGAGGGTT 58.361 55.000 0.00 0.00 0.00 4.11
599 623 4.531426 TTGTGTGTGGGGTGGGGC 62.531 66.667 0.00 0.00 0.00 5.80
601 625 4.974721 GTGTGTGGGGTGGGGCAG 62.975 72.222 0.00 0.00 0.00 4.85
670 706 0.693049 ACCTCCATTCCACACTCACC 59.307 55.000 0.00 0.00 0.00 4.02
672 708 0.987294 CTCCATTCCACACTCACCCT 59.013 55.000 0.00 0.00 0.00 4.34
714 769 1.079256 AGAGCACTCCTGTAGCCCA 59.921 57.895 0.00 0.00 0.00 5.36
715 770 0.975040 AGAGCACTCCTGTAGCCCAG 60.975 60.000 0.00 0.00 41.15 4.45
716 771 2.124942 GCACTCCTGTAGCCCAGC 60.125 66.667 0.00 0.00 40.06 4.85
717 772 2.664081 GCACTCCTGTAGCCCAGCT 61.664 63.158 0.00 0.00 43.41 4.24
718 773 1.220206 CACTCCTGTAGCCCAGCTG 59.780 63.158 6.78 6.78 40.10 4.24
719 774 2.188994 CTCCTGTAGCCCAGCTGC 59.811 66.667 8.66 0.00 40.10 5.25
720 775 3.729965 CTCCTGTAGCCCAGCTGCG 62.730 68.421 8.66 0.00 43.95 5.18
721 776 4.845580 CCTGTAGCCCAGCTGCGG 62.846 72.222 8.66 12.49 43.95 5.69
722 777 4.087892 CTGTAGCCCAGCTGCGGT 62.088 66.667 18.80 14.38 43.95 5.68
723 778 3.612247 CTGTAGCCCAGCTGCGGTT 62.612 63.158 18.80 16.17 43.95 4.44
724 779 2.359975 GTAGCCCAGCTGCGGTTT 60.360 61.111 18.80 11.96 40.10 3.27
725 780 2.046314 TAGCCCAGCTGCGGTTTC 60.046 61.111 18.80 6.27 40.10 2.78
726 781 3.950794 TAGCCCAGCTGCGGTTTCG 62.951 63.158 18.80 0.68 40.10 3.46
736 811 1.447314 GCGGTTTCGAATCTCCGGT 60.447 57.895 26.15 0.00 42.71 5.28
749 824 4.096003 CCGGTCGGCCAAGGTGAT 62.096 66.667 6.96 0.00 34.09 3.06
761 851 2.225019 CCAAGGTGATGATAGCGCATTC 59.775 50.000 11.47 6.39 0.00 2.67
771 861 0.827925 TAGCGCATTCCCTCTCCGAT 60.828 55.000 11.47 0.00 0.00 4.18
772 862 1.666234 GCGCATTCCCTCTCCGATC 60.666 63.158 0.30 0.00 0.00 3.69
773 863 2.045280 CGCATTCCCTCTCCGATCT 58.955 57.895 0.00 0.00 0.00 2.75
784 889 3.815401 CCTCTCCGATCTTCTCTTCTCTC 59.185 52.174 0.00 0.00 0.00 3.20
825 940 1.533625 TTTGGCCCGAGTTTGATGAG 58.466 50.000 0.00 0.00 0.00 2.90
868 983 7.473027 AGATGCATCTTTTCTTGTTTGTTTG 57.527 32.000 23.75 0.00 31.97 2.93
908 1023 6.092670 TGAGAGAAATATCTTGTTTGCTTCGG 59.907 38.462 0.00 0.00 35.54 4.30
917 1032 4.155826 TCTTGTTTGCTTCGGGATGTTATG 59.844 41.667 0.00 0.00 0.00 1.90
918 1033 3.417101 TGTTTGCTTCGGGATGTTATGT 58.583 40.909 0.00 0.00 0.00 2.29
919 1034 4.580868 TGTTTGCTTCGGGATGTTATGTA 58.419 39.130 0.00 0.00 0.00 2.29
920 1035 4.393680 TGTTTGCTTCGGGATGTTATGTAC 59.606 41.667 0.00 0.00 0.00 2.90
921 1036 3.897141 TGCTTCGGGATGTTATGTACA 57.103 42.857 0.00 0.00 41.97 2.90
922 1037 3.792401 TGCTTCGGGATGTTATGTACAG 58.208 45.455 0.33 0.00 40.83 2.74
1396 1529 2.579657 TTCGACGCCCTGTCCATGT 61.580 57.895 0.00 0.00 45.23 3.21
1397 1530 2.501223 TTCGACGCCCTGTCCATGTC 62.501 60.000 0.00 0.00 45.23 3.06
1399 1532 2.927856 ACGCCCTGTCCATGTCCA 60.928 61.111 0.00 0.00 0.00 4.02
1400 1533 2.257409 GACGCCCTGTCCATGTCCAT 62.257 60.000 0.00 0.00 42.04 3.41
1401 1534 1.820906 CGCCCTGTCCATGTCCATG 60.821 63.158 0.14 0.14 38.51 3.66
1409 1542 2.910360 CATGTCCATGGGAGGCGA 59.090 61.111 13.02 0.00 35.24 5.54
1560 1693 0.250295 TGAAGGCGAACCACTTCCTG 60.250 55.000 0.00 0.00 41.78 3.86
1807 1940 2.765807 CCGGCCAGGAGAGGTGAT 60.766 66.667 2.24 0.00 45.00 3.06
1808 1941 1.457643 CCGGCCAGGAGAGGTGATA 60.458 63.158 2.24 0.00 45.00 2.15
1810 1943 1.043116 CGGCCAGGAGAGGTGATACA 61.043 60.000 2.24 0.00 0.00 2.29
1828 1961 4.326255 CCACCATGGTTGAGGAGC 57.674 61.111 16.84 0.00 31.35 4.70
1829 1962 1.379044 CCACCATGGTTGAGGAGCC 60.379 63.158 16.84 0.00 31.35 4.70
1830 1963 1.687612 CACCATGGTTGAGGAGCCT 59.312 57.895 16.84 0.00 0.00 4.58
1831 1964 0.393537 CACCATGGTTGAGGAGCCTC 60.394 60.000 16.84 9.61 43.01 4.70
1848 1981 0.254178 CTCCTCCTCAACCACCATGG 59.746 60.000 11.19 11.19 45.02 3.66
1849 1982 1.379044 CCTCCTCAACCACCATGGC 60.379 63.158 13.04 0.00 42.67 4.40
1850 1983 1.687612 CTCCTCAACCACCATGGCT 59.312 57.895 13.04 0.00 42.67 4.75
1851 1984 0.679002 CTCCTCAACCACCATGGCTG 60.679 60.000 13.04 9.45 42.67 4.85
1869 2002 3.057946 GGCTGATCCTCTGTTTGTTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
1887 2020 1.136057 GTCGGCATTTCGTTTCTGACC 60.136 52.381 0.00 0.00 0.00 4.02
1896 2029 2.198406 TCGTTTCTGACCGTGTTCTTG 58.802 47.619 0.00 0.00 0.00 3.02
1897 2030 1.260561 CGTTTCTGACCGTGTTCTTGG 59.739 52.381 0.00 0.00 0.00 3.61
1905 2038 1.134220 ACCGTGTTCTTGGTGTGATGT 60.134 47.619 0.00 0.00 37.02 3.06
1908 2041 2.032030 CGTGTTCTTGGTGTGATGTTCC 60.032 50.000 0.00 0.00 0.00 3.62
1923 2056 2.636412 TTCCAGGCGTGAGAGGACG 61.636 63.158 8.24 0.00 42.42 4.79
2083 2216 5.656859 AGGTACAGTACATTGCTAGATCACA 59.343 40.000 12.89 0.00 0.00 3.58
2084 2217 6.154534 AGGTACAGTACATTGCTAGATCACAA 59.845 38.462 12.89 0.00 0.00 3.33
2085 2218 6.477033 GGTACAGTACATTGCTAGATCACAAG 59.523 42.308 12.89 0.00 0.00 3.16
2086 2219 6.286240 ACAGTACATTGCTAGATCACAAGA 57.714 37.500 0.00 0.00 0.00 3.02
2087 2220 6.882656 ACAGTACATTGCTAGATCACAAGAT 58.117 36.000 0.00 0.00 37.13 2.40
2110 2243 8.361139 AGATCACTAGGCATTGTGTAATACTAC 58.639 37.037 12.39 0.00 35.82 2.73
2131 2264 8.508883 ACTACTAGGAAGTAAGTATGTGTGAG 57.491 38.462 0.00 0.00 37.75 3.51
2134 2267 5.923733 AGGAAGTAAGTATGTGTGAGGAG 57.076 43.478 0.00 0.00 0.00 3.69
2135 2268 5.580998 AGGAAGTAAGTATGTGTGAGGAGA 58.419 41.667 0.00 0.00 0.00 3.71
2151 2284 4.472470 TGAGGAGATGAAAGGATGACATGT 59.528 41.667 0.00 0.00 0.00 3.21
2271 2404 1.597663 CGCGGGTTTTATCAGACCATC 59.402 52.381 0.00 0.00 37.68 3.51
2301 2434 1.667724 CAGATGGGATTGTCGCTCAAC 59.332 52.381 0.00 0.00 38.97 3.18
2323 2456 3.213249 TCGGTAAAGCTCTCGACTTTC 57.787 47.619 3.05 0.00 38.31 2.62
2343 2476 9.102757 GACTTTCACTCATGAATATATGTGTGT 57.897 33.333 15.33 7.77 45.59 3.72
2390 2523 4.261909 GGTTCCATGATGAATGATCCTTGC 60.262 45.833 0.00 0.00 38.72 4.01
2391 2524 3.143728 TCCATGATGAATGATCCTTGCG 58.856 45.455 0.00 0.00 38.72 4.85
2392 2525 2.882761 CCATGATGAATGATCCTTGCGT 59.117 45.455 0.00 0.00 38.72 5.24
2393 2526 3.304458 CCATGATGAATGATCCTTGCGTG 60.304 47.826 0.00 0.00 38.72 5.34
2394 2527 2.989909 TGATGAATGATCCTTGCGTGT 58.010 42.857 0.00 0.00 0.00 4.49
2438 2571 2.526958 TGGTGAAGCCACTGACTGA 58.473 52.632 0.00 0.00 43.61 3.41
2485 2618 8.815141 TTTTCATATTTCCATCAGTGTTGTTG 57.185 30.769 0.70 0.00 0.00 3.33
2512 2753 7.971201 TCTGATAGATATTCATTTCAGGCTGT 58.029 34.615 15.27 0.00 33.19 4.40
2528 2769 1.603678 GCTGTTGCCCATTGTTGAGTG 60.604 52.381 0.00 0.00 0.00 3.51
2753 3006 2.979814 AAGGTTTTGGTGCAACTTCC 57.020 45.000 2.04 0.00 36.74 3.46
2774 3027 2.983136 CGAGCCGCTTAGATAGATGTTG 59.017 50.000 0.00 0.00 0.00 3.33
2841 3101 8.853077 TTATGTTAGGAATAGGATGCATTCAG 57.147 34.615 7.96 0.00 34.66 3.02
2845 3105 7.283127 TGTTAGGAATAGGATGCATTCAGAAAC 59.717 37.037 7.96 4.95 34.66 2.78
2925 3195 8.626526 GTTTATTAAGGTTTCACACTTCCTTCA 58.373 33.333 0.00 0.00 40.26 3.02
2934 3204 5.825593 TCACACTTCCTTCAATACTTCCT 57.174 39.130 0.00 0.00 0.00 3.36
3053 3323 1.418373 TGAACGCTGACATTCACTCG 58.582 50.000 0.00 0.00 29.89 4.18
3057 3327 0.803768 CGCTGACATTCACTCGAGGG 60.804 60.000 18.41 14.07 0.00 4.30
3118 3388 7.307219 GGCTAACACTTTGTAGTTTGTACTCAG 60.307 40.741 0.00 0.00 35.78 3.35
3134 3404 5.932303 TGTACTCAGCATTTTGTCCTACTTC 59.068 40.000 0.00 0.00 0.00 3.01
3135 3405 4.973168 ACTCAGCATTTTGTCCTACTTCA 58.027 39.130 0.00 0.00 0.00 3.02
3151 3421 8.425703 GTCCTACTTCATTTAGGAAGATTAGCT 58.574 37.037 10.74 0.00 45.48 3.32
3152 3422 8.993424 TCCTACTTCATTTAGGAAGATTAGCTT 58.007 33.333 10.74 0.00 45.66 3.74
3174 3444 1.615392 AGATGGAAGTGGCTTTGTTGC 59.385 47.619 0.00 0.00 0.00 4.17
3185 3455 1.871039 GCTTTGTTGCAAGACGGTAGA 59.129 47.619 0.00 0.00 0.00 2.59
3226 3496 4.497473 TTTACAGTCCATTTTCGGCTTG 57.503 40.909 0.00 0.00 0.00 4.01
3263 3533 6.494893 TTCCGATAACTCATCAAAGTTTGG 57.505 37.500 15.47 2.16 40.01 3.28
3277 3547 7.727331 TCAAAGTTTGGATGGCTTTATTTTG 57.273 32.000 15.47 0.00 32.01 2.44
3281 3551 3.608316 TGGATGGCTTTATTTTGGCAC 57.392 42.857 0.00 0.00 41.41 5.01
3289 3560 4.805719 GGCTTTATTTTGGCACAGATTAGC 59.194 41.667 0.00 0.00 42.39 3.09
3311 3582 4.496010 GCTGAGCTGTGATTTCTTGCATAG 60.496 45.833 0.00 0.00 0.00 2.23
3349 3620 9.639601 AATTTTTATTCACTAAGTTAGCAAGCC 57.360 29.630 9.92 0.00 0.00 4.35
3359 3630 0.813184 TTAGCAAGCCAAGCTGATGC 59.187 50.000 5.34 5.34 43.33 3.91
3484 3755 3.429684 GCTCAGACAACTAGGGAGCTAAC 60.430 52.174 0.00 0.00 45.61 2.34
3518 3789 5.508567 TCCTCTTTTCATCATGCACCATTA 58.491 37.500 0.00 0.00 0.00 1.90
3523 3794 7.654568 TCTTTTCATCATGCACCATTATGATC 58.345 34.615 0.00 0.00 40.93 2.92
3536 3807 7.449704 GCACCATTATGATCTCCCTCTTATTTT 59.550 37.037 0.00 0.00 0.00 1.82
3537 3808 8.790718 CACCATTATGATCTCCCTCTTATTTTG 58.209 37.037 0.00 0.00 0.00 2.44
3702 3974 0.889994 TTGCCATCCAGCACATCAAC 59.110 50.000 0.00 0.00 43.97 3.18
3816 4088 4.350368 TTTACACAGTGAAGATCCTGCA 57.650 40.909 7.81 0.00 31.76 4.41
3840 4112 7.305993 GCACTATTTTCTTTTCAACCTTTCACG 60.306 37.037 0.00 0.00 0.00 4.35
3850 4122 0.464916 ACCTTTCACGGCGAAACCTT 60.465 50.000 16.62 0.00 38.72 3.50
3859 4131 2.287368 ACGGCGAAACCTTTGAATCAAC 60.287 45.455 16.62 0.00 35.61 3.18
3953 4225 1.676967 CAAGAGGCTGAACCAGGGC 60.677 63.158 0.00 0.00 43.14 5.19
3992 4264 2.887568 GAGACATGCCAGCGTCCG 60.888 66.667 0.00 0.00 32.33 4.79
4023 4295 1.197910 GCGCGACATAGTTCAGGTAC 58.802 55.000 12.10 0.00 0.00 3.34
4024 4296 1.468565 GCGCGACATAGTTCAGGTACA 60.469 52.381 12.10 0.00 0.00 2.90
4032 4304 6.054860 ACATAGTTCAGGTACAGCATTCTT 57.945 37.500 0.00 0.00 0.00 2.52
4034 4306 7.796054 ACATAGTTCAGGTACAGCATTCTTAT 58.204 34.615 0.00 0.00 0.00 1.73
4036 4308 6.992063 AGTTCAGGTACAGCATTCTTATTG 57.008 37.500 0.00 0.00 0.00 1.90
4097 4369 5.470437 AGCAATCTCACATGATTATGCAGAG 59.530 40.000 0.00 11.91 39.35 3.35
4263 4535 5.584551 AGGTGGAAGAAGTACCTCAATTT 57.415 39.130 0.00 0.00 40.73 1.82
4289 4561 6.542005 TGCTGAGACAATGTCTTTTGAAGTTA 59.458 34.615 17.79 2.87 43.53 2.24
4348 4627 1.278537 TGAGTGGATGGTGCATGAGA 58.721 50.000 0.00 0.00 0.00 3.27
4349 4628 1.841919 TGAGTGGATGGTGCATGAGAT 59.158 47.619 0.00 0.00 0.00 2.75
4350 4629 2.219458 GAGTGGATGGTGCATGAGATG 58.781 52.381 0.00 0.00 0.00 2.90
4351 4630 1.841919 AGTGGATGGTGCATGAGATGA 59.158 47.619 0.00 0.00 0.00 2.92
4352 4631 2.158798 AGTGGATGGTGCATGAGATGAG 60.159 50.000 0.00 0.00 0.00 2.90
4357 4636 2.391678 TGGTGCATGAGATGAGAGCTA 58.608 47.619 0.00 0.00 0.00 3.32
4401 4680 5.768164 TGTAACTTCCCCTGTTTTCTGAATC 59.232 40.000 0.00 0.00 0.00 2.52
4414 4693 7.223584 TGTTTTCTGAATCTCTGGTACAATGA 58.776 34.615 0.00 0.00 38.70 2.57
4444 4723 6.376978 CCTGTTGTTTCTATTCTTTCAGCTG 58.623 40.000 7.63 7.63 0.00 4.24
4546 4830 8.458573 AATAATAATCCATCAAACAGCCGTAA 57.541 30.769 0.00 0.00 0.00 3.18
4549 4833 7.672983 ATAATCCATCAAACAGCCGTAATAG 57.327 36.000 0.00 0.00 0.00 1.73
4555 4839 0.391927 AACAGCCGTAATAGCGCCAA 60.392 50.000 2.29 0.00 34.64 4.52
4580 4864 5.354234 AGTCTTGGCCAAATTGTTATCTACG 59.646 40.000 20.91 2.76 0.00 3.51
4607 4891 2.987413 TATCGCCTTTGTGTGCTTTG 57.013 45.000 0.00 0.00 0.00 2.77
5085 5380 4.119862 TCGGCTATGTCTATTTCTGCAAC 58.880 43.478 0.00 0.00 0.00 4.17
5086 5381 4.122776 CGGCTATGTCTATTTCTGCAACT 58.877 43.478 0.00 0.00 0.00 3.16
5087 5382 4.025396 CGGCTATGTCTATTTCTGCAACTG 60.025 45.833 0.00 0.00 0.00 3.16
5088 5383 4.878397 GGCTATGTCTATTTCTGCAACTGT 59.122 41.667 0.00 0.00 0.00 3.55
5092 5387 7.278868 GCTATGTCTATTTCTGCAACTGTTACT 59.721 37.037 0.00 0.00 0.00 2.24
5510 5840 6.109359 AGTTGTACAATCTCTTACTCCATGC 58.891 40.000 12.26 0.00 0.00 4.06
5519 5849 2.497675 TCTTACTCCATGCTCAGTGACC 59.502 50.000 0.00 0.00 0.00 4.02
5529 5859 1.784525 CTCAGTGACCGTTCTGTTCC 58.215 55.000 0.00 0.00 33.89 3.62
5726 6076 3.029570 TGTGACTCATGATCCTCAGAGG 58.970 50.000 10.70 10.70 36.46 3.69
5771 6121 2.769602 GGTATCCACCTCAGTCCCTA 57.230 55.000 0.00 0.00 42.11 3.53
5788 6138 2.050918 CCTAACCCTCTCCAATCTCCC 58.949 57.143 0.00 0.00 0.00 4.30
5817 6167 3.802685 GTCTCTATACTTTTCGGCGCAAT 59.197 43.478 10.83 0.00 0.00 3.56
5855 6207 2.504367 TGTTTGCAGGGAGCTTCTTAC 58.496 47.619 0.00 0.00 45.94 2.34
5925 6277 1.211457 AGGTATGCTCCCTTGCAGAAG 59.789 52.381 0.00 0.00 46.71 2.85
5941 6293 7.120873 CCTTGCAGAAGTTCTACACTAGTACTA 59.879 40.741 4.74 1.89 35.70 1.82
5942 6294 7.375106 TGCAGAAGTTCTACACTAGTACTAC 57.625 40.000 4.74 0.00 35.70 2.73
5943 6295 7.166851 TGCAGAAGTTCTACACTAGTACTACT 58.833 38.462 4.74 0.00 35.70 2.57
6047 6425 1.367346 TGCCTTTACACAGGGATGGA 58.633 50.000 0.00 0.00 34.01 3.41
6113 6491 5.538053 TGATGCCATCAGAAAGGTAACAAAA 59.462 36.000 2.53 0.00 34.17 2.44
6227 6612 1.964373 CCAGCCGCTGGTTACGTTT 60.964 57.895 28.60 0.00 45.82 3.60
6254 6639 3.716006 CAGAAGCGCCACCACACG 61.716 66.667 2.29 0.00 0.00 4.49
6317 6702 2.044946 AGCGGCAACATCCTTCCC 60.045 61.111 1.45 0.00 0.00 3.97
6330 6715 0.391263 CCTTCCCGGTGAGTTACTGC 60.391 60.000 0.00 0.00 34.15 4.40
6346 6731 0.108041 CTGCCATGCCAATGTTTCCC 60.108 55.000 0.00 0.00 31.27 3.97
6352 6738 3.355378 CATGCCAATGTTTCCCTCACTA 58.645 45.455 0.00 0.00 0.00 2.74
6369 6755 6.718912 CCCTCACTATGTTCTCTGATGATCTA 59.281 42.308 0.00 0.00 0.00 1.98
6570 6956 3.812053 GGTGAGGATTGAAATGATCTCCG 59.188 47.826 0.00 0.00 29.70 4.63
6578 6964 1.401905 GAAATGATCTCCGTTGTGGGC 59.598 52.381 0.00 0.00 38.76 5.36
6679 7065 2.987149 CAACAACCTCTGCTACACGTAG 59.013 50.000 0.00 0.00 36.29 3.51
6708 7094 1.078426 CCTTCGCCCGGTTCTCATT 60.078 57.895 0.00 0.00 0.00 2.57
6711 7097 0.672401 TTCGCCCGGTTCTCATTGTC 60.672 55.000 0.00 0.00 0.00 3.18
6738 7124 7.255569 TCTTGATCAATGAACAATGAGCATTC 58.744 34.615 8.96 0.00 41.12 2.67
6740 7126 6.560711 TGATCAATGAACAATGAGCATTCTG 58.439 36.000 6.70 0.00 37.08 3.02
6745 7131 4.401022 TGAACAATGAGCATTCTGTTCCT 58.599 39.130 18.25 0.00 35.00 3.36
6753 7139 8.680903 CAATGAGCATTCTGTTCCTTAACTTAT 58.319 33.333 0.00 0.00 36.51 1.73
6784 7170 0.393077 ACCTCTTGTGCAGTTACGCT 59.607 50.000 0.00 0.00 0.00 5.07
6826 7212 0.320374 TCGGTAAGTTGGCACTCTGG 59.680 55.000 0.00 0.00 30.45 3.86
6829 7215 2.808933 CGGTAAGTTGGCACTCTGGAAA 60.809 50.000 0.00 0.00 30.45 3.13
6834 7220 3.365472 AGTTGGCACTCTGGAAACTTTT 58.635 40.909 0.00 0.00 0.00 2.27
6836 7222 1.946768 TGGCACTCTGGAAACTTTTCG 59.053 47.619 0.00 0.00 38.06 3.46
6837 7223 1.947456 GGCACTCTGGAAACTTTTCGT 59.053 47.619 0.00 0.00 38.06 3.85
6838 7224 2.031944 GGCACTCTGGAAACTTTTCGTC 60.032 50.000 0.00 0.00 38.06 4.20
6840 7226 3.467803 CACTCTGGAAACTTTTCGTCCT 58.532 45.455 0.00 0.00 38.06 3.85
6841 7227 4.628074 CACTCTGGAAACTTTTCGTCCTA 58.372 43.478 0.00 0.00 38.06 2.94
6844 7230 6.204882 CACTCTGGAAACTTTTCGTCCTAAAT 59.795 38.462 0.00 0.00 38.06 1.40
6845 7231 6.204882 ACTCTGGAAACTTTTCGTCCTAAATG 59.795 38.462 0.00 0.00 38.06 2.32
6846 7232 5.048991 TCTGGAAACTTTTCGTCCTAAATGC 60.049 40.000 0.00 0.00 38.06 3.56
6847 7233 4.825085 TGGAAACTTTTCGTCCTAAATGCT 59.175 37.500 0.00 0.00 38.06 3.79
6848 7234 5.300792 TGGAAACTTTTCGTCCTAAATGCTT 59.699 36.000 0.00 0.00 38.06 3.91
6849 7235 5.629435 GGAAACTTTTCGTCCTAAATGCTTG 59.371 40.000 0.00 0.00 38.06 4.01
6850 7236 5.767816 AACTTTTCGTCCTAAATGCTTGT 57.232 34.783 0.00 0.00 0.00 3.16
6851 7237 5.358298 ACTTTTCGTCCTAAATGCTTGTC 57.642 39.130 0.00 0.00 0.00 3.18
6852 7238 4.819630 ACTTTTCGTCCTAAATGCTTGTCA 59.180 37.500 0.00 0.00 0.00 3.58
6853 7239 5.298276 ACTTTTCGTCCTAAATGCTTGTCAA 59.702 36.000 0.00 0.00 0.00 3.18
6854 7240 4.742438 TTCGTCCTAAATGCTTGTCAAC 57.258 40.909 0.00 0.00 0.00 3.18
6855 7241 3.734463 TCGTCCTAAATGCTTGTCAACA 58.266 40.909 0.00 0.00 0.00 3.33
6856 7242 4.323417 TCGTCCTAAATGCTTGTCAACAT 58.677 39.130 0.00 0.00 0.00 2.71
6857 7243 4.759693 TCGTCCTAAATGCTTGTCAACATT 59.240 37.500 7.26 7.26 38.11 2.71
6858 7244 5.088739 CGTCCTAAATGCTTGTCAACATTC 58.911 41.667 11.37 2.54 35.49 2.67
6859 7245 5.106555 CGTCCTAAATGCTTGTCAACATTCT 60.107 40.000 11.37 7.02 35.49 2.40
6860 7246 6.088824 GTCCTAAATGCTTGTCAACATTCTG 58.911 40.000 11.37 8.56 35.49 3.02
6861 7247 6.003326 TCCTAAATGCTTGTCAACATTCTGA 58.997 36.000 11.37 7.62 35.49 3.27
6862 7248 6.489700 TCCTAAATGCTTGTCAACATTCTGAA 59.510 34.615 11.37 0.00 35.49 3.02
6863 7249 7.014134 TCCTAAATGCTTGTCAACATTCTGAAA 59.986 33.333 11.37 0.00 35.49 2.69
6864 7250 7.327761 CCTAAATGCTTGTCAACATTCTGAAAG 59.672 37.037 11.37 0.00 35.49 2.62
6865 7251 5.779529 ATGCTTGTCAACATTCTGAAAGT 57.220 34.783 0.00 0.00 33.76 2.66
6866 7252 5.173774 TGCTTGTCAACATTCTGAAAGTC 57.826 39.130 0.00 0.00 33.76 3.01
6867 7253 4.883585 TGCTTGTCAACATTCTGAAAGTCT 59.116 37.500 0.00 0.00 33.76 3.24
6868 7254 5.357878 TGCTTGTCAACATTCTGAAAGTCTT 59.642 36.000 0.00 0.00 33.76 3.01
6869 7255 5.684626 GCTTGTCAACATTCTGAAAGTCTTG 59.315 40.000 0.00 0.00 33.76 3.02
6870 7256 6.458751 GCTTGTCAACATTCTGAAAGTCTTGA 60.459 38.462 0.00 0.00 33.76 3.02
6871 7257 7.389803 TTGTCAACATTCTGAAAGTCTTGAA 57.610 32.000 0.00 0.00 33.76 2.69
6872 7258 6.785191 TGTCAACATTCTGAAAGTCTTGAAC 58.215 36.000 0.00 0.00 33.76 3.18
6873 7259 6.183360 TGTCAACATTCTGAAAGTCTTGAACC 60.183 38.462 0.00 0.00 33.76 3.62
6874 7260 5.007626 TCAACATTCTGAAAGTCTTGAACCG 59.992 40.000 0.00 0.00 33.76 4.44
6875 7261 4.451900 ACATTCTGAAAGTCTTGAACCGT 58.548 39.130 0.00 0.00 33.76 4.83
6876 7262 5.607477 ACATTCTGAAAGTCTTGAACCGTA 58.393 37.500 0.00 0.00 33.76 4.02
6877 7263 6.053005 ACATTCTGAAAGTCTTGAACCGTAA 58.947 36.000 0.00 0.00 33.76 3.18
6878 7264 6.540914 ACATTCTGAAAGTCTTGAACCGTAAA 59.459 34.615 0.00 0.00 33.76 2.01
6879 7265 5.978934 TCTGAAAGTCTTGAACCGTAAAC 57.021 39.130 0.00 0.00 33.76 2.01
6880 7266 5.421277 TCTGAAAGTCTTGAACCGTAAACA 58.579 37.500 0.00 0.00 33.76 2.83
6881 7267 6.053005 TCTGAAAGTCTTGAACCGTAAACAT 58.947 36.000 0.00 0.00 33.76 2.71
6882 7268 6.540914 TCTGAAAGTCTTGAACCGTAAACATT 59.459 34.615 0.00 0.00 33.76 2.71
6883 7269 7.066525 TCTGAAAGTCTTGAACCGTAAACATTT 59.933 33.333 0.00 0.00 33.76 2.32
6884 7270 7.540299 TGAAAGTCTTGAACCGTAAACATTTT 58.460 30.769 0.00 0.00 0.00 1.82
6885 7271 8.030106 TGAAAGTCTTGAACCGTAAACATTTTT 58.970 29.630 0.00 0.00 0.00 1.94
6886 7272 9.505995 GAAAGTCTTGAACCGTAAACATTTTTA 57.494 29.630 0.00 0.00 0.00 1.52
6887 7273 9.857957 AAAGTCTTGAACCGTAAACATTTTTAA 57.142 25.926 0.00 0.00 0.00 1.52
6888 7274 9.857957 AAGTCTTGAACCGTAAACATTTTTAAA 57.142 25.926 0.00 0.00 0.00 1.52
6928 7317 6.304356 TGCTGAAAGTCTTGAACTGTAATG 57.696 37.500 0.00 0.00 38.58 1.90
7189 7579 3.129871 GTTCTACTGCTGATGATGCTCC 58.870 50.000 0.00 0.00 0.00 4.70
7205 7595 1.661341 CTCCACAATCTACTGCTGCC 58.339 55.000 0.00 0.00 0.00 4.85
7223 7613 3.361786 TGCCCTAATAAAAAGGCTCCAC 58.638 45.455 1.12 0.00 45.94 4.02
7272 7663 3.715628 ATTCACTGAAGGTGTTGTTGC 57.284 42.857 0.00 0.00 45.50 4.17
7288 7679 6.091713 GTGTTGTTGCACCGATACTTAAGTAT 59.908 38.462 24.86 24.86 37.38 2.12
7289 7680 6.651643 TGTTGTTGCACCGATACTTAAGTATT 59.348 34.615 25.25 10.36 40.99 1.89
7314 7705 4.102113 GCCCTGTTGTGGCTCATT 57.898 55.556 0.00 0.00 45.70 2.57
7457 7879 6.855763 AATTTGCCTTCTATTCATGTGGAA 57.144 33.333 0.00 0.00 40.46 3.53
7541 7963 7.497925 TTGGTTAACATTTGCCCAAATTAAC 57.502 32.000 8.10 15.16 38.84 2.01
7590 8013 4.142249 GGTTTGGTTTTCACTAGCAACTGT 60.142 41.667 0.00 0.00 33.21 3.55
7634 8061 4.318332 TCTTCAGCAATACCAAGAGTGTG 58.682 43.478 0.00 0.00 0.00 3.82
7680 8107 4.241681 TGTGGAAAAACAACACAAGAAGC 58.758 39.130 0.00 0.00 41.65 3.86
7681 8108 4.241681 GTGGAAAAACAACACAAGAAGCA 58.758 39.130 0.00 0.00 35.30 3.91
7682 8109 4.688413 GTGGAAAAACAACACAAGAAGCAA 59.312 37.500 0.00 0.00 35.30 3.91
7683 8110 5.178438 GTGGAAAAACAACACAAGAAGCAAA 59.822 36.000 0.00 0.00 35.30 3.68
7684 8111 5.760253 TGGAAAAACAACACAAGAAGCAAAA 59.240 32.000 0.00 0.00 0.00 2.44
7685 8112 6.077197 GGAAAAACAACACAAGAAGCAAAAC 58.923 36.000 0.00 0.00 0.00 2.43
7686 8113 6.073276 GGAAAAACAACACAAGAAGCAAAACT 60.073 34.615 0.00 0.00 0.00 2.66
7687 8114 6.466308 AAAACAACACAAGAAGCAAAACTC 57.534 33.333 0.00 0.00 0.00 3.01
7688 8115 4.110036 ACAACACAAGAAGCAAAACTCC 57.890 40.909 0.00 0.00 0.00 3.85
7689 8116 3.509575 ACAACACAAGAAGCAAAACTCCA 59.490 39.130 0.00 0.00 0.00 3.86
7690 8117 4.021544 ACAACACAAGAAGCAAAACTCCAA 60.022 37.500 0.00 0.00 0.00 3.53
7691 8118 4.799564 ACACAAGAAGCAAAACTCCAAA 57.200 36.364 0.00 0.00 0.00 3.28
7692 8119 4.747810 ACACAAGAAGCAAAACTCCAAAG 58.252 39.130 0.00 0.00 0.00 2.77
7693 8120 4.114794 CACAAGAAGCAAAACTCCAAAGG 58.885 43.478 0.00 0.00 0.00 3.11
7694 8121 4.023291 ACAAGAAGCAAAACTCCAAAGGA 58.977 39.130 0.00 0.00 0.00 3.36
7703 8148 5.604565 CAAAACTCCAAAGGAAAGCAGAAT 58.395 37.500 0.00 0.00 0.00 2.40
7914 8394 2.266055 GAACAGGGGCCAGTCTCG 59.734 66.667 4.39 0.00 0.00 4.04
7956 8436 2.815308 CCCGAGGGAACATCCGAG 59.185 66.667 0.84 0.00 37.43 4.63
8073 8573 8.845227 TGAAAGAAAATACAGTTACATGCTCAA 58.155 29.630 0.00 0.00 0.00 3.02
8112 8612 2.780065 TAGCAAACACAAAGCAGCTG 57.220 45.000 10.11 10.11 33.83 4.24
8113 8613 0.529119 AGCAAACACAAAGCAGCTGC 60.529 50.000 31.53 31.53 42.49 5.25
8115 8615 0.179105 CAAACACAAAGCAGCTGCCA 60.179 50.000 34.39 0.00 43.38 4.92
8117 8617 0.103572 AACACAAAGCAGCTGCCAAG 59.896 50.000 34.39 24.84 43.38 3.61
8118 8618 1.039233 ACACAAAGCAGCTGCCAAGT 61.039 50.000 34.39 25.49 43.38 3.16
8120 8620 1.337703 CACAAAGCAGCTGCCAAGTTA 59.662 47.619 34.39 0.00 43.38 2.24
8121 8621 1.338020 ACAAAGCAGCTGCCAAGTTAC 59.662 47.619 34.39 5.26 43.38 2.50
8122 8622 1.610522 CAAAGCAGCTGCCAAGTTACT 59.389 47.619 34.39 11.28 43.38 2.24
8123 8623 1.528129 AAGCAGCTGCCAAGTTACTC 58.472 50.000 34.39 3.66 43.38 2.59
8124 8624 0.322008 AGCAGCTGCCAAGTTACTCC 60.322 55.000 34.39 3.09 43.38 3.85
8125 8625 1.308783 GCAGCTGCCAAGTTACTCCC 61.309 60.000 28.76 0.00 34.31 4.30
8126 8626 0.326264 CAGCTGCCAAGTTACTCCCT 59.674 55.000 0.00 0.00 0.00 4.20
8127 8627 0.615850 AGCTGCCAAGTTACTCCCTC 59.384 55.000 0.00 0.00 0.00 4.30
8128 8628 0.393132 GCTGCCAAGTTACTCCCTCC 60.393 60.000 0.00 0.00 0.00 4.30
8129 8629 0.108138 CTGCCAAGTTACTCCCTCCG 60.108 60.000 0.00 0.00 0.00 4.63
8130 8630 0.834687 TGCCAAGTTACTCCCTCCGT 60.835 55.000 0.00 0.00 0.00 4.69
8131 8631 1.188863 GCCAAGTTACTCCCTCCGTA 58.811 55.000 0.00 0.00 0.00 4.02
8132 8632 1.551883 GCCAAGTTACTCCCTCCGTAA 59.448 52.381 0.00 0.00 0.00 3.18
8133 8633 2.027837 GCCAAGTTACTCCCTCCGTAAA 60.028 50.000 0.00 0.00 0.00 2.01
8134 8634 3.858247 CCAAGTTACTCCCTCCGTAAAG 58.142 50.000 0.00 0.00 0.00 1.85
8135 8635 3.512724 CCAAGTTACTCCCTCCGTAAAGA 59.487 47.826 0.00 0.00 0.00 2.52
8136 8636 4.020839 CCAAGTTACTCCCTCCGTAAAGAA 60.021 45.833 0.00 0.00 0.00 2.52
8137 8637 5.511888 CCAAGTTACTCCCTCCGTAAAGAAA 60.512 44.000 0.00 0.00 0.00 2.52
8138 8638 6.171213 CAAGTTACTCCCTCCGTAAAGAAAT 58.829 40.000 0.00 0.00 0.00 2.17
8139 8639 7.325694 CAAGTTACTCCCTCCGTAAAGAAATA 58.674 38.462 0.00 0.00 0.00 1.40
8140 8640 7.672122 AGTTACTCCCTCCGTAAAGAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
8141 8641 8.773033 AGTTACTCCCTCCGTAAAGAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
8142 8642 9.377238 AGTTACTCCCTCCGTAAAGAAATATAT 57.623 33.333 0.00 0.00 0.00 0.86
8146 8646 9.993454 ACTCCCTCCGTAAAGAAATATATAAAC 57.007 33.333 0.00 0.00 0.00 2.01
8147 8647 9.136952 CTCCCTCCGTAAAGAAATATATAAACG 57.863 37.037 0.00 0.00 0.00 3.60
8148 8648 7.599998 TCCCTCCGTAAAGAAATATATAAACGC 59.400 37.037 0.00 0.00 0.00 4.84
8149 8649 7.601508 CCCTCCGTAAAGAAATATATAAACGCT 59.398 37.037 0.00 0.00 0.00 5.07
8150 8650 8.645487 CCTCCGTAAAGAAATATATAAACGCTC 58.355 37.037 0.00 0.00 0.00 5.03
8151 8651 9.408069 CTCCGTAAAGAAATATATAAACGCTCT 57.592 33.333 0.00 0.00 0.00 4.09
8152 8652 9.754382 TCCGTAAAGAAATATATAAACGCTCTT 57.246 29.630 0.00 0.00 0.00 2.85
8169 8669 7.772332 ACGCTCTTATATTTGTTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
8170 8670 6.761714 ACGCTCTTATATTTGTTTACAGAGGG 59.238 38.462 8.36 8.36 38.95 4.30
8171 8671 6.984474 CGCTCTTATATTTGTTTACAGAGGGA 59.016 38.462 4.76 0.00 36.40 4.20
8172 8672 7.169982 CGCTCTTATATTTGTTTACAGAGGGAG 59.830 40.741 4.76 0.00 36.40 4.30
8173 8673 7.988028 GCTCTTATATTTGTTTACAGAGGGAGT 59.012 37.037 0.00 0.00 0.00 3.85
8179 8679 6.742559 TTTGTTTACAGAGGGAGTACTTCT 57.257 37.500 0.01 0.06 0.00 2.85
8180 8680 5.723672 TGTTTACAGAGGGAGTACTTCTG 57.276 43.478 17.71 17.71 34.85 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 0.744414 CAAGAACGATGGGCGGTGAT 60.744 55.000 0.00 0.00 42.25 3.06
19 20 6.564328 AGAAATTAAATCAAGAACGATGGGC 58.436 36.000 0.00 0.00 0.00 5.36
49 51 0.918983 TGGAAAGATGGGCCCACTAG 59.081 55.000 31.51 0.00 0.00 2.57
50 52 1.607225 ATGGAAAGATGGGCCCACTA 58.393 50.000 31.51 12.99 0.00 2.74
79 81 0.748450 AAGACGGACCGTGTTTCTCA 59.252 50.000 27.26 0.00 40.26 3.27
89 91 3.660865 ACAACTGATAACAAGACGGACC 58.339 45.455 0.00 0.00 0.00 4.46
91 93 4.951254 TCAACAACTGATAACAAGACGGA 58.049 39.130 0.00 0.00 0.00 4.69
94 96 7.595130 GGGATTTTCAACAACTGATAACAAGAC 59.405 37.037 0.00 0.00 32.78 3.01
107 109 4.402793 TCTTTGTTCGGGGATTTTCAACAA 59.597 37.500 0.00 0.00 35.64 2.83
112 114 6.097356 GGTTTATCTTTGTTCGGGGATTTTC 58.903 40.000 0.00 0.00 0.00 2.29
120 122 4.647964 CATCGTGGTTTATCTTTGTTCGG 58.352 43.478 0.00 0.00 0.00 4.30
144 146 6.993079 AGTACATCAACTGTCATTGTAGTCA 58.007 36.000 0.00 0.00 39.39 3.41
146 148 7.892609 TGTAGTACATCAACTGTCATTGTAGT 58.107 34.615 0.00 8.44 39.39 2.73
155 157 7.658179 CAAGACATTGTAGTACATCAACTGT 57.342 36.000 3.28 3.68 42.13 3.55
171 173 5.142639 CCATCCATCCCATAACAAGACATT 58.857 41.667 0.00 0.00 0.00 2.71
172 174 4.448200 CCCATCCATCCCATAACAAGACAT 60.448 45.833 0.00 0.00 0.00 3.06
213 225 3.299804 TCTCGTTCGAAATCAAATCGTCG 59.700 43.478 0.00 0.00 40.99 5.12
215 227 3.985279 TGTCTCGTTCGAAATCAAATCGT 59.015 39.130 0.00 0.00 40.99 3.73
217 229 6.153212 TCTTGTCTCGTTCGAAATCAAATC 57.847 37.500 0.00 0.00 0.00 2.17
218 230 5.389935 GCTCTTGTCTCGTTCGAAATCAAAT 60.390 40.000 0.00 0.00 0.00 2.32
223 235 2.989840 CTGCTCTTGTCTCGTTCGAAAT 59.010 45.455 0.00 0.00 0.00 2.17
227 239 1.347817 GGCTGCTCTTGTCTCGTTCG 61.348 60.000 0.00 0.00 0.00 3.95
234 246 0.944386 TTTGTTCGGCTGCTCTTGTC 59.056 50.000 0.00 0.00 0.00 3.18
237 249 0.663153 GTGTTTGTTCGGCTGCTCTT 59.337 50.000 0.00 0.00 0.00 2.85
238 250 0.179045 AGTGTTTGTTCGGCTGCTCT 60.179 50.000 0.00 0.00 0.00 4.09
246 258 1.508632 ACGGATGGAGTGTTTGTTCG 58.491 50.000 0.00 0.00 0.00 3.95
247 259 2.096417 CGAACGGATGGAGTGTTTGTTC 60.096 50.000 0.00 0.00 0.00 3.18
254 266 1.076332 GTTTCCGAACGGATGGAGTG 58.924 55.000 16.57 0.00 44.74 3.51
255 267 0.682852 TGTTTCCGAACGGATGGAGT 59.317 50.000 16.57 0.00 44.74 3.85
256 268 1.732259 CTTGTTTCCGAACGGATGGAG 59.268 52.381 16.57 8.84 44.74 3.86
257 269 1.071071 ACTTGTTTCCGAACGGATGGA 59.929 47.619 16.57 0.00 44.74 3.41
258 270 1.196808 CACTTGTTTCCGAACGGATGG 59.803 52.381 16.57 7.96 44.74 3.51
260 272 0.872388 GCACTTGTTTCCGAACGGAT 59.128 50.000 16.57 0.00 44.74 4.18
273 287 0.309612 AACTTAAACCGCGGCACTTG 59.690 50.000 28.58 15.68 0.00 3.16
279 293 6.144175 TCTTTTTATTGAACTTAAACCGCGG 58.856 36.000 26.86 26.86 0.00 6.46
302 316 5.042593 TCATGTGTTGTGTTGCATCTTTTC 58.957 37.500 0.00 0.00 0.00 2.29
305 319 3.380954 TGTCATGTGTTGTGTTGCATCTT 59.619 39.130 0.00 0.00 0.00 2.40
306 320 2.950975 TGTCATGTGTTGTGTTGCATCT 59.049 40.909 0.00 0.00 0.00 2.90
307 321 3.352554 TGTCATGTGTTGTGTTGCATC 57.647 42.857 0.00 0.00 0.00 3.91
310 328 1.854126 GCTTGTCATGTGTTGTGTTGC 59.146 47.619 0.00 0.00 0.00 4.17
314 332 3.434641 CCTCTAGCTTGTCATGTGTTGTG 59.565 47.826 0.00 0.00 0.00 3.33
319 337 2.762887 TCCTCCTCTAGCTTGTCATGTG 59.237 50.000 0.00 0.00 0.00 3.21
324 342 3.361786 AGAGTTCCTCCTCTAGCTTGTC 58.638 50.000 0.00 0.00 40.02 3.18
368 387 4.710695 CCGTGGCTGTACGCGTGA 62.711 66.667 24.59 7.38 42.44 4.35
378 397 0.696501 AATTACTTCCCACCGTGGCT 59.303 50.000 12.54 0.00 35.79 4.75
442 463 5.106908 GCTGGTTCTTGTGAAGACATTCTAC 60.107 44.000 0.00 0.00 37.23 2.59
454 475 0.031178 GCTGGTTGCTGGTTCTTGTG 59.969 55.000 0.00 0.00 38.95 3.33
496 517 9.672086 GTTATGTTTTCACAGCACATTTACTTA 57.328 29.630 0.00 0.00 35.94 2.24
499 520 7.145323 AGGTTATGTTTTCACAGCACATTTAC 58.855 34.615 0.00 0.00 35.94 2.01
506 527 4.720046 TGGTAGGTTATGTTTTCACAGCA 58.280 39.130 0.00 0.00 35.94 4.41
541 562 1.561542 TCCTCCCTTGATTTCTCTGCC 59.438 52.381 0.00 0.00 0.00 4.85
552 573 2.708325 CCTCCTCCTATTTCCTCCCTTG 59.292 54.545 0.00 0.00 0.00 3.61
577 601 1.076339 CACCCCACACACAAACCCT 60.076 57.895 0.00 0.00 0.00 4.34
578 602 2.131067 CCACCCCACACACAAACCC 61.131 63.158 0.00 0.00 0.00 4.11
579 603 2.131067 CCCACCCCACACACAAACC 61.131 63.158 0.00 0.00 0.00 3.27
580 604 2.131067 CCCCACCCCACACACAAAC 61.131 63.158 0.00 0.00 0.00 2.93
581 605 2.280416 CCCCACCCCACACACAAA 59.720 61.111 0.00 0.00 0.00 2.83
582 606 4.531426 GCCCCACCCCACACACAA 62.531 66.667 0.00 0.00 0.00 3.33
599 623 8.739039 AGATGACTTTATATGCTCTAGCTACTG 58.261 37.037 3.26 0.00 42.66 2.74
600 624 8.877864 AGATGACTTTATATGCTCTAGCTACT 57.122 34.615 3.26 0.00 42.66 2.57
601 625 8.188139 GGAGATGACTTTATATGCTCTAGCTAC 58.812 40.741 3.26 0.00 42.66 3.58
670 706 0.043334 TCTTTGAGAGGGGAGGGAGG 59.957 60.000 0.00 0.00 0.00 4.30
672 708 2.158004 TCTTTCTTTGAGAGGGGAGGGA 60.158 50.000 0.00 0.00 0.00 4.20
714 769 0.741221 GGAGATTCGAAACCGCAGCT 60.741 55.000 0.00 0.00 0.00 4.24
715 770 1.716172 GGAGATTCGAAACCGCAGC 59.284 57.895 0.00 0.00 0.00 5.25
716 771 1.421410 CCGGAGATTCGAAACCGCAG 61.421 60.000 25.41 15.14 43.37 5.18
717 772 1.447140 CCGGAGATTCGAAACCGCA 60.447 57.895 25.41 0.00 43.37 5.69
718 773 1.419107 GACCGGAGATTCGAAACCGC 61.419 60.000 25.41 13.55 43.37 5.68
719 774 1.138047 CGACCGGAGATTCGAAACCG 61.138 60.000 24.50 24.50 44.16 4.44
720 775 0.804933 CCGACCGGAGATTCGAAACC 60.805 60.000 9.46 5.65 35.35 3.27
721 776 1.419107 GCCGACCGGAGATTCGAAAC 61.419 60.000 9.46 0.00 35.35 2.78
722 777 1.153706 GCCGACCGGAGATTCGAAA 60.154 57.895 9.46 0.00 35.35 3.46
723 778 2.493030 GCCGACCGGAGATTCGAA 59.507 61.111 9.46 0.00 35.35 3.71
724 779 3.524606 GGCCGACCGGAGATTCGA 61.525 66.667 9.46 0.00 35.35 3.71
725 780 3.365291 TTGGCCGACCGGAGATTCG 62.365 63.158 9.46 6.88 39.70 3.34
726 781 1.521681 CTTGGCCGACCGGAGATTC 60.522 63.158 9.46 0.00 39.70 2.52
727 782 2.584608 CTTGGCCGACCGGAGATT 59.415 61.111 9.46 0.00 39.70 2.40
736 811 0.106708 GCTATCATCACCTTGGCCGA 59.893 55.000 0.00 0.00 0.00 5.54
749 824 0.681733 GGAGAGGGAATGCGCTATCA 59.318 55.000 13.88 0.00 44.37 2.15
761 851 2.884639 GAGAAGAGAAGATCGGAGAGGG 59.115 54.545 0.00 0.00 43.63 4.30
771 861 1.658686 GGCCGCGAGAGAAGAGAAGA 61.659 60.000 8.23 0.00 0.00 2.87
772 862 1.226831 GGCCGCGAGAGAAGAGAAG 60.227 63.158 8.23 0.00 0.00 2.85
773 863 2.885861 GGCCGCGAGAGAAGAGAA 59.114 61.111 8.23 0.00 0.00 2.87
825 940 3.057734 TCTTTCGGCTCGTTCTTTCTTC 58.942 45.455 0.00 0.00 0.00 2.87
865 980 6.306199 TCTCTCAGGATTTCATCAAACCAAA 58.694 36.000 0.00 0.00 0.00 3.28
866 981 5.879763 TCTCTCAGGATTTCATCAAACCAA 58.120 37.500 0.00 0.00 0.00 3.67
867 982 5.503634 TCTCTCAGGATTTCATCAAACCA 57.496 39.130 0.00 0.00 0.00 3.67
868 983 6.824305 TTTCTCTCAGGATTTCATCAAACC 57.176 37.500 0.00 0.00 0.00 3.27
908 1023 7.642978 CGTACTCAACTACTGTACATAACATCC 59.357 40.741 0.00 0.00 37.50 3.51
1140 1255 4.548513 CCTCCTCCTCCCCCTCCG 62.549 77.778 0.00 0.00 0.00 4.63
1141 1256 3.036959 TCCTCCTCCTCCCCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
1142 1257 2.612251 CTCCTCCTCCTCCCCCTC 59.388 72.222 0.00 0.00 0.00 4.30
1143 1258 3.039526 CCTCCTCCTCCTCCCCCT 61.040 72.222 0.00 0.00 0.00 4.79
1144 1259 4.890306 GCCTCCTCCTCCTCCCCC 62.890 77.778 0.00 0.00 0.00 5.40
1145 1260 3.767044 GAGCCTCCTCCTCCTCCCC 62.767 73.684 0.00 0.00 31.68 4.81
1146 1261 2.123033 GAGCCTCCTCCTCCTCCC 60.123 72.222 0.00 0.00 31.68 4.30
1396 1529 3.458163 GTCGTCGCCTCCCATGGA 61.458 66.667 15.22 0.00 0.00 3.41
1397 1530 3.432051 GAGTCGTCGCCTCCCATGG 62.432 68.421 4.14 4.14 0.00 3.66
1399 1532 3.518998 CGAGTCGTCGCCTCCCAT 61.519 66.667 3.82 0.00 39.88 4.00
1708 1841 1.021390 GCGGTGTACATGCTCTTGCT 61.021 55.000 13.90 0.00 40.48 3.91
1814 1947 1.225704 GGAGGCTCCTCAACCATGG 59.774 63.158 26.44 11.19 44.40 3.66
1815 1948 2.305095 AGGAGGCTCCTCAACCATG 58.695 57.895 30.46 0.00 45.66 3.66
1816 1949 4.928981 AGGAGGCTCCTCAACCAT 57.071 55.556 30.46 6.83 45.66 3.55
1824 1957 1.613630 TGGTTGAGGAGGAGGCTCC 60.614 63.158 26.42 26.42 43.65 4.70
1825 1958 1.599576 GTGGTTGAGGAGGAGGCTC 59.400 63.158 5.78 5.78 0.00 4.70
1826 1959 1.920835 GGTGGTTGAGGAGGAGGCT 60.921 63.158 0.00 0.00 0.00 4.58
1827 1960 1.566298 ATGGTGGTTGAGGAGGAGGC 61.566 60.000 0.00 0.00 0.00 4.70
1828 1961 0.254178 CATGGTGGTTGAGGAGGAGG 59.746 60.000 0.00 0.00 0.00 4.30
1829 1962 0.254178 CCATGGTGGTTGAGGAGGAG 59.746 60.000 2.57 0.00 31.35 3.69
1830 1963 1.852157 GCCATGGTGGTTGAGGAGGA 61.852 60.000 14.67 0.00 40.46 3.71
1831 1964 1.379044 GCCATGGTGGTTGAGGAGG 60.379 63.158 14.67 0.00 40.46 4.30
1833 1966 3.920817 AGCCATGGTGGTTGAGGA 58.079 55.556 14.67 0.00 40.46 3.71
1838 1971 0.257039 GAGGATCAGCCATGGTGGTT 59.743 55.000 14.67 0.70 40.02 3.67
1848 1981 3.364366 CGACAAACAAACAGAGGATCAGC 60.364 47.826 0.00 0.00 37.82 4.26
1849 1982 3.187227 CCGACAAACAAACAGAGGATCAG 59.813 47.826 0.00 0.00 37.82 2.90
1850 1983 3.138304 CCGACAAACAAACAGAGGATCA 58.862 45.455 0.00 0.00 37.82 2.92
1851 1984 2.095718 GCCGACAAACAAACAGAGGATC 60.096 50.000 0.00 0.00 0.00 3.36
1869 2002 0.179225 CGGTCAGAAACGAAATGCCG 60.179 55.000 0.00 0.00 0.00 5.69
1887 2020 2.032030 GGAACATCACACCAAGAACACG 60.032 50.000 0.00 0.00 0.00 4.49
1896 2029 1.302511 ACGCCTGGAACATCACACC 60.303 57.895 0.00 0.00 38.20 4.16
1897 2030 0.602638 TCACGCCTGGAACATCACAC 60.603 55.000 0.00 0.00 38.20 3.82
1905 2038 2.636412 CGTCCTCTCACGCCTGGAA 61.636 63.158 0.00 0.00 31.96 3.53
1908 2041 1.444553 GAACGTCCTCTCACGCCTG 60.445 63.158 0.00 0.00 43.93 4.85
1923 2056 2.568623 ACCTGATCACCACCTTGAAC 57.431 50.000 0.00 0.00 0.00 3.18
1965 2098 1.946650 GATGTACTGCTCGAGCCGC 60.947 63.158 33.23 20.04 41.18 6.53
2083 2216 7.796054 AGTATTACACAATGCCTAGTGATCTT 58.204 34.615 6.53 0.00 39.03 2.40
2084 2217 7.366847 AGTATTACACAATGCCTAGTGATCT 57.633 36.000 6.53 0.00 39.03 2.75
2085 2218 8.361139 AGTAGTATTACACAATGCCTAGTGATC 58.639 37.037 6.53 0.00 39.03 2.92
2086 2219 8.251383 AGTAGTATTACACAATGCCTAGTGAT 57.749 34.615 6.53 0.00 39.03 3.06
2087 2220 7.655521 AGTAGTATTACACAATGCCTAGTGA 57.344 36.000 6.53 0.00 39.03 3.41
2110 2243 6.829298 TCTCCTCACACATACTTACTTCCTAG 59.171 42.308 0.00 0.00 0.00 3.02
2120 2253 5.026121 TCCTTTCATCTCCTCACACATACT 58.974 41.667 0.00 0.00 0.00 2.12
2121 2254 5.344743 TCCTTTCATCTCCTCACACATAC 57.655 43.478 0.00 0.00 0.00 2.39
2122 2255 5.662657 TCATCCTTTCATCTCCTCACACATA 59.337 40.000 0.00 0.00 0.00 2.29
2123 2256 4.472470 TCATCCTTTCATCTCCTCACACAT 59.528 41.667 0.00 0.00 0.00 3.21
2126 2259 3.840078 TGTCATCCTTTCATCTCCTCACA 59.160 43.478 0.00 0.00 0.00 3.58
2131 2264 5.067023 GGAAACATGTCATCCTTTCATCTCC 59.933 44.000 18.75 0.00 0.00 3.71
2134 2267 5.902613 TGGAAACATGTCATCCTTTCATC 57.097 39.130 23.68 4.41 34.24 2.92
2166 2299 4.697514 GACCATATGGCGCATATCTACAT 58.302 43.478 22.18 3.79 35.18 2.29
2301 2434 2.853731 AGTCGAGAGCTTTACCGATG 57.146 50.000 0.00 0.00 33.47 3.84
2343 2476 1.268352 GCACCGGCAGTTTCATTGTAA 59.732 47.619 0.00 0.00 40.72 2.41
2370 2503 3.143728 CGCAAGGATCATTCATCATGGA 58.856 45.455 0.00 0.00 33.07 3.41
2390 2523 5.093457 CCTACTAGATAACACACACACACG 58.907 45.833 0.00 0.00 0.00 4.49
2391 2524 6.072064 ACTCCTACTAGATAACACACACACAC 60.072 42.308 0.00 0.00 0.00 3.82
2392 2525 6.008331 ACTCCTACTAGATAACACACACACA 58.992 40.000 0.00 0.00 0.00 3.72
2393 2526 6.512342 ACTCCTACTAGATAACACACACAC 57.488 41.667 0.00 0.00 0.00 3.82
2394 2527 7.170277 TGTACTCCTACTAGATAACACACACA 58.830 38.462 0.00 0.00 0.00 3.72
2436 2569 4.707030 CAGCAATTTCTACTGCCAATCA 57.293 40.909 0.00 0.00 39.47 2.57
2485 2618 8.719648 CAGCCTGAAATGAATATCTATCAGAAC 58.280 37.037 0.00 0.00 37.14 3.01
2512 2753 2.964464 ACATTCACTCAACAATGGGCAA 59.036 40.909 0.00 0.00 34.77 4.52
2516 2757 7.539710 CAGTATGAAACATTCACTCAACAATGG 59.460 37.037 0.00 0.00 43.48 3.16
2592 2833 7.716998 ATGAGTTAGTCATGTGAACTTTCACTT 59.283 33.333 20.05 12.74 46.15 3.16
2640 2882 4.207891 TCACTAGAGACCATTGCCTTTC 57.792 45.455 0.00 0.00 0.00 2.62
2753 3006 2.983136 CAACATCTATCTAAGCGGCTCG 59.017 50.000 1.45 0.00 0.00 5.03
2774 3027 4.194640 TCAAAGATAGCTGGAATGCAGAC 58.805 43.478 5.79 0.00 34.99 3.51
2821 3081 7.577303 AGTTTCTGAATGCATCCTATTCCTAA 58.423 34.615 0.00 0.00 34.43 2.69
2909 3179 6.486993 AGGAAGTATTGAAGGAAGTGTGAAAC 59.513 38.462 0.00 0.00 37.35 2.78
2925 3195 8.993424 AGGTCAGTGTATATTGAAGGAAGTATT 58.007 33.333 0.00 0.00 0.00 1.89
2934 3204 7.918076 AGAAAGGAAGGTCAGTGTATATTGAA 58.082 34.615 0.00 0.00 0.00 2.69
3118 3388 7.391148 TCCTAAATGAAGTAGGACAAAATGC 57.609 36.000 0.00 0.00 41.83 3.56
3151 3421 3.228188 ACAAAGCCACTTCCATCTGAA 57.772 42.857 0.00 0.00 0.00 3.02
3152 3422 2.886523 CAACAAAGCCACTTCCATCTGA 59.113 45.455 0.00 0.00 0.00 3.27
3153 3423 2.608752 GCAACAAAGCCACTTCCATCTG 60.609 50.000 0.00 0.00 0.00 2.90
3154 3424 1.615392 GCAACAAAGCCACTTCCATCT 59.385 47.619 0.00 0.00 0.00 2.90
3155 3425 1.340889 TGCAACAAAGCCACTTCCATC 59.659 47.619 0.00 0.00 0.00 3.51
3156 3426 1.412079 TGCAACAAAGCCACTTCCAT 58.588 45.000 0.00 0.00 0.00 3.41
3157 3427 1.136695 CTTGCAACAAAGCCACTTCCA 59.863 47.619 0.00 0.00 0.00 3.53
3158 3428 1.408702 TCTTGCAACAAAGCCACTTCC 59.591 47.619 0.00 0.00 0.00 3.46
3159 3429 2.463876 GTCTTGCAACAAAGCCACTTC 58.536 47.619 0.00 0.00 0.00 3.01
3160 3430 1.202290 CGTCTTGCAACAAAGCCACTT 60.202 47.619 0.00 0.00 0.00 3.16
3161 3431 0.381801 CGTCTTGCAACAAAGCCACT 59.618 50.000 0.00 0.00 0.00 4.00
3162 3432 0.594796 CCGTCTTGCAACAAAGCCAC 60.595 55.000 0.00 0.00 0.00 5.01
3163 3433 1.034838 ACCGTCTTGCAACAAAGCCA 61.035 50.000 0.00 0.00 0.00 4.75
3164 3434 0.948678 TACCGTCTTGCAACAAAGCC 59.051 50.000 0.00 0.00 0.00 4.35
3165 3435 1.871039 TCTACCGTCTTGCAACAAAGC 59.129 47.619 0.00 0.00 0.00 3.51
3174 3444 2.806244 CAAACCCAACTCTACCGTCTTG 59.194 50.000 0.00 0.00 0.00 3.02
3185 3455 9.541143 CTGTAAATTCATTTAACAAACCCAACT 57.459 29.630 0.00 0.00 34.36 3.16
3218 3488 3.331150 ACGTATTCATCAACAAGCCGAA 58.669 40.909 0.00 0.00 0.00 4.30
3263 3533 4.454728 TCTGTGCCAAAATAAAGCCATC 57.545 40.909 0.00 0.00 0.00 3.51
3281 3551 5.117584 AGAAATCACAGCTCAGCTAATCTG 58.882 41.667 0.00 6.71 44.21 2.90
3289 3560 4.874396 TCTATGCAAGAAATCACAGCTCAG 59.126 41.667 0.00 0.00 0.00 3.35
3333 3604 3.077359 AGCTTGGCTTGCTAACTTAGTG 58.923 45.455 3.19 0.00 39.21 2.74
3359 3630 2.757686 TCTAGCGTGTTCAGCGATAG 57.242 50.000 3.97 3.97 45.92 2.08
3484 3755 3.861840 TGAAAAGAGGAAGCTCCATACG 58.138 45.455 5.21 0.00 39.61 3.06
3518 3789 7.443302 TCAGACAAAATAAGAGGGAGATCAT 57.557 36.000 0.00 0.00 0.00 2.45
3523 3794 4.637977 GGCTTCAGACAAAATAAGAGGGAG 59.362 45.833 0.00 0.00 0.00 4.30
3536 3807 4.284829 TGTACATGAATGGCTTCAGACA 57.715 40.909 0.00 0.00 44.32 3.41
3537 3808 5.449588 CCAATGTACATGAATGGCTTCAGAC 60.450 44.000 9.63 4.80 44.32 3.51
3651 3923 4.695928 GTCTCCTGAAAATACTGGACAACC 59.304 45.833 0.00 0.00 34.90 3.77
3760 4032 8.345565 GGGAGTGTATTTTCAGTATTAGCATTG 58.654 37.037 0.00 0.00 0.00 2.82
3816 4088 7.200455 CCGTGAAAGGTTGAAAAGAAAATAGT 58.800 34.615 0.00 0.00 0.00 2.12
3840 4112 3.243401 ACAGTTGATTCAAAGGTTTCGCC 60.243 43.478 0.00 0.00 37.58 5.54
3850 4122 7.175467 AGCACAGATCATAAACAGTTGATTCAA 59.825 33.333 0.00 0.00 32.84 2.69
3859 4131 7.281774 AGGATTGTAAGCACAGATCATAAACAG 59.718 37.037 0.00 0.00 35.67 3.16
3953 4225 4.648762 TCCTCAAGAAGAGCTCTTATCTGG 59.351 45.833 28.53 23.99 42.84 3.86
4023 4295 5.047802 AGTCCCAACAACAATAAGAATGCTG 60.048 40.000 0.00 0.00 0.00 4.41
4024 4296 5.079643 AGTCCCAACAACAATAAGAATGCT 58.920 37.500 0.00 0.00 0.00 3.79
4032 4304 5.570205 TGGTAGAAGTCCCAACAACAATA 57.430 39.130 0.00 0.00 0.00 1.90
4034 4306 3.935818 TGGTAGAAGTCCCAACAACAA 57.064 42.857 0.00 0.00 0.00 2.83
4036 4308 3.009143 AGGATGGTAGAAGTCCCAACAAC 59.991 47.826 0.00 0.00 33.66 3.32
4263 4535 5.357878 ACTTCAAAAGACATTGTCTCAGCAA 59.642 36.000 19.23 9.60 42.59 3.91
4289 4561 5.138125 CACAATAAGGGCACAAGACAAAT 57.862 39.130 0.00 0.00 0.00 2.32
4332 4611 2.158856 TCTCATCTCATGCACCATCCAC 60.159 50.000 0.00 0.00 0.00 4.02
4348 4627 9.581289 AACTTATGTAGTATGTCTAGCTCTCAT 57.419 33.333 0.00 0.00 35.54 2.90
4349 4628 8.982091 AACTTATGTAGTATGTCTAGCTCTCA 57.018 34.615 0.00 0.00 35.54 3.27
4350 4629 9.887406 GAAACTTATGTAGTATGTCTAGCTCTC 57.113 37.037 0.00 0.00 35.54 3.20
4351 4630 9.635404 AGAAACTTATGTAGTATGTCTAGCTCT 57.365 33.333 0.00 0.00 35.54 4.09
4352 4631 9.672086 CAGAAACTTATGTAGTATGTCTAGCTC 57.328 37.037 0.00 0.00 35.54 4.09
4401 4680 2.840651 AGGGGAAGTCATTGTACCAGAG 59.159 50.000 0.00 0.00 0.00 3.35
4414 4693 5.584551 AGAATAGAAACAACAGGGGAAGT 57.415 39.130 0.00 0.00 0.00 3.01
4444 4723 3.008330 TCTACCAGTCTCGCTGTACTTC 58.992 50.000 0.00 0.00 43.55 3.01
4555 4839 6.128007 CGTAGATAACAATTTGGCCAAGACTT 60.128 38.462 19.48 10.94 0.00 3.01
4580 4864 4.591202 CACACAAAGGCGATATGATTCAC 58.409 43.478 0.00 0.00 0.00 3.18
4607 4891 6.262273 TGAAAATGAACAGTAAGGGTTGAGAC 59.738 38.462 0.00 0.00 0.00 3.36
4642 4926 5.577945 CACCATTGACCATTTTCTGCATAAC 59.422 40.000 0.00 0.00 0.00 1.89
4876 5165 5.703876 CTCCAAAGCAAAGTCCTGTAATTC 58.296 41.667 0.00 0.00 0.00 2.17
5085 5380 4.021016 ACCTTGAGCCTAACAGAGTAACAG 60.021 45.833 0.00 0.00 0.00 3.16
5086 5381 3.901844 ACCTTGAGCCTAACAGAGTAACA 59.098 43.478 0.00 0.00 0.00 2.41
5087 5382 4.538746 ACCTTGAGCCTAACAGAGTAAC 57.461 45.455 0.00 0.00 0.00 2.50
5088 5383 5.187186 CCTAACCTTGAGCCTAACAGAGTAA 59.813 44.000 0.00 0.00 0.00 2.24
5092 5387 2.236395 GCCTAACCTTGAGCCTAACAGA 59.764 50.000 0.00 0.00 0.00 3.41
5510 5840 1.341531 AGGAACAGAACGGTCACTGAG 59.658 52.381 17.69 0.00 37.54 3.35
5519 5849 5.419760 TCGATGTAGATAGGAACAGAACG 57.580 43.478 0.00 0.00 0.00 3.95
5565 5895 9.528018 TGACAGAAATTTAAGGTTCATGTTTTC 57.472 29.630 0.00 0.00 0.00 2.29
5573 5904 6.366061 GGCAACATGACAGAAATTTAAGGTTC 59.634 38.462 0.00 0.00 0.00 3.62
5771 6121 2.200955 GAAGGGAGATTGGAGAGGGTT 58.799 52.381 0.00 0.00 0.00 4.11
5788 6138 5.520649 GCCGAAAAGTATAGAGACAAGGAAG 59.479 44.000 0.00 0.00 0.00 3.46
5817 6167 1.232119 CATGTGCAGCAGAGTGTGAA 58.768 50.000 0.00 0.00 0.00 3.18
5855 6207 2.159572 CCGGTTGTTCGCTTAAAGGATG 60.160 50.000 0.00 0.00 0.00 3.51
5925 6277 8.997323 TGTCTCAAAGTAGTACTAGTGTAGAAC 58.003 37.037 11.04 8.04 0.00 3.01
5941 6293 7.544217 GTGTAAACACCAAAATTGTCTCAAAGT 59.456 33.333 1.65 0.00 40.85 2.66
5942 6294 7.894847 GTGTAAACACCAAAATTGTCTCAAAG 58.105 34.615 1.65 0.00 40.85 2.77
5943 6295 7.820044 GTGTAAACACCAAAATTGTCTCAAA 57.180 32.000 1.65 0.00 40.85 2.69
6047 6425 1.428869 AGAACTGGCCTTCACTCACT 58.571 50.000 3.32 0.00 0.00 3.41
6113 6491 6.800072 TGAAAAACAGGGGAAATTGTACTT 57.200 33.333 0.00 0.00 0.00 2.24
6227 6612 2.338620 CGCTTCTGGACCACGACA 59.661 61.111 0.00 0.00 0.00 4.35
6254 6639 1.658409 GTTGTGCGCAAACAGCCTC 60.658 57.895 14.00 0.00 41.38 4.70
6317 6702 1.369091 GGCATGGCAGTAACTCACCG 61.369 60.000 15.47 0.00 0.00 4.94
6330 6715 1.205417 GTGAGGGAAACATTGGCATGG 59.795 52.381 0.00 0.00 34.27 3.66
6346 6731 9.844790 GATTAGATCATCAGAGAACATAGTGAG 57.155 37.037 0.00 0.00 0.00 3.51
6352 6738 8.926374 AGACAAGATTAGATCATCAGAGAACAT 58.074 33.333 0.00 0.00 0.00 2.71
6421 6807 2.941720 GTGGCAGATCTTGGAGTCAATC 59.058 50.000 0.00 0.00 31.75 2.67
6570 6956 4.947147 TCGTGCCCTGCCCACAAC 62.947 66.667 0.00 0.00 32.85 3.32
6679 7065 3.119096 GCGAAGGACTGCGGAACC 61.119 66.667 0.00 2.10 0.00 3.62
6708 7094 7.574404 GCTCATTGTTCATTGATCAAGAAGACA 60.574 37.037 14.54 12.25 0.00 3.41
6711 7097 6.617879 TGCTCATTGTTCATTGATCAAGAAG 58.382 36.000 14.54 13.30 0.00 2.85
6738 7124 9.757227 CAGAGGAGATTATAAGTTAAGGAACAG 57.243 37.037 0.00 0.00 38.10 3.16
6740 7126 9.752961 GTCAGAGGAGATTATAAGTTAAGGAAC 57.247 37.037 0.00 0.00 35.64 3.62
6745 7131 9.716556 AAGAGGTCAGAGGAGATTATAAGTTAA 57.283 33.333 0.00 0.00 0.00 2.01
6753 7139 3.449018 GCACAAGAGGTCAGAGGAGATTA 59.551 47.826 0.00 0.00 0.00 1.75
6826 7212 6.206498 ACAAGCATTTAGGACGAAAAGTTTC 58.794 36.000 0.00 0.00 0.00 2.78
6829 7215 4.819630 TGACAAGCATTTAGGACGAAAAGT 59.180 37.500 0.00 0.00 0.00 2.66
6834 7220 3.734463 TGTTGACAAGCATTTAGGACGA 58.266 40.909 0.00 0.00 0.00 4.20
6836 7222 6.072508 TCAGAATGTTGACAAGCATTTAGGAC 60.073 38.462 13.58 5.13 35.69 3.85
6837 7223 6.003326 TCAGAATGTTGACAAGCATTTAGGA 58.997 36.000 13.58 10.26 35.69 2.94
6838 7224 6.258230 TCAGAATGTTGACAAGCATTTAGG 57.742 37.500 13.58 8.88 35.69 2.69
6840 7226 7.715657 ACTTTCAGAATGTTGACAAGCATTTA 58.284 30.769 13.58 4.86 35.69 1.40
6841 7227 6.576185 ACTTTCAGAATGTTGACAAGCATTT 58.424 32.000 13.58 5.58 35.69 2.32
6844 7230 4.883585 AGACTTTCAGAATGTTGACAAGCA 59.116 37.500 3.32 0.00 37.40 3.91
6845 7231 5.429957 AGACTTTCAGAATGTTGACAAGC 57.570 39.130 3.32 0.00 37.40 4.01
6846 7232 7.019774 TCAAGACTTTCAGAATGTTGACAAG 57.980 36.000 3.32 0.00 37.40 3.16
6847 7233 7.250569 GTTCAAGACTTTCAGAATGTTGACAA 58.749 34.615 3.32 0.00 37.40 3.18
6848 7234 6.183360 GGTTCAAGACTTTCAGAATGTTGACA 60.183 38.462 3.32 0.00 37.40 3.58
6849 7235 6.202226 GGTTCAAGACTTTCAGAATGTTGAC 58.798 40.000 3.32 1.27 37.40 3.18
6850 7236 5.007626 CGGTTCAAGACTTTCAGAATGTTGA 59.992 40.000 3.32 2.16 37.40 3.18
6851 7237 5.207768 CGGTTCAAGACTTTCAGAATGTTG 58.792 41.667 3.32 0.00 37.40 3.33
6852 7238 4.881850 ACGGTTCAAGACTTTCAGAATGTT 59.118 37.500 3.32 0.00 37.40 2.71
6853 7239 4.451900 ACGGTTCAAGACTTTCAGAATGT 58.548 39.130 1.31 1.31 37.40 2.71
6854 7240 6.539649 TTACGGTTCAAGACTTTCAGAATG 57.460 37.500 0.00 0.00 37.54 2.67
6855 7241 6.540914 TGTTTACGGTTCAAGACTTTCAGAAT 59.459 34.615 0.00 0.00 0.00 2.40
6856 7242 5.875910 TGTTTACGGTTCAAGACTTTCAGAA 59.124 36.000 0.00 0.00 0.00 3.02
6857 7243 5.421277 TGTTTACGGTTCAAGACTTTCAGA 58.579 37.500 0.00 0.00 0.00 3.27
6858 7244 5.728351 TGTTTACGGTTCAAGACTTTCAG 57.272 39.130 0.00 0.00 0.00 3.02
6859 7245 6.687081 AATGTTTACGGTTCAAGACTTTCA 57.313 33.333 0.00 0.00 0.00 2.69
6860 7246 7.980742 AAAATGTTTACGGTTCAAGACTTTC 57.019 32.000 0.00 0.00 0.00 2.62
6861 7247 9.857957 TTAAAAATGTTTACGGTTCAAGACTTT 57.142 25.926 0.00 0.00 0.00 2.66
6862 7248 9.857957 TTTAAAAATGTTTACGGTTCAAGACTT 57.142 25.926 0.00 0.00 0.00 3.01
6928 7317 7.420800 ACATTTTCAGTCAGTCAGAAATGTTC 58.579 34.615 6.47 0.00 32.98 3.18
7189 7579 2.988010 TAGGGCAGCAGTAGATTGTG 57.012 50.000 0.00 0.00 0.00 3.33
7205 7595 3.692791 GCGTGGAGCCTTTTTATTAGG 57.307 47.619 0.00 0.00 40.81 2.69
7250 7640 6.462885 GTGCAACAACACCTTCAGTGAATTC 61.463 44.000 5.91 0.00 43.21 2.17
7252 7642 3.181487 GTGCAACAACACCTTCAGTGAAT 60.181 43.478 5.91 0.00 43.21 2.57
7272 7663 9.125906 GCACATAGTAATACTTAAGTATCGGTG 57.874 37.037 24.80 22.75 40.10 4.94
7275 7666 8.521176 AGGGCACATAGTAATACTTAAGTATCG 58.479 37.037 24.80 13.27 40.10 2.92
7280 7671 7.769044 ACAACAGGGCACATAGTAATACTTAAG 59.231 37.037 0.00 0.00 0.00 1.85
7288 7679 3.066291 CCACAACAGGGCACATAGTAA 57.934 47.619 0.00 0.00 0.00 2.24
7289 7680 2.779755 CCACAACAGGGCACATAGTA 57.220 50.000 0.00 0.00 0.00 1.82
7634 8061 5.131067 AGGGTAGTTTCCAAAACTCTTCAC 58.869 41.667 8.26 2.32 0.00 3.18
7677 8104 3.197549 TGCTTTCCTTTGGAGTTTTGCTT 59.802 39.130 0.00 0.00 31.21 3.91
7678 8105 2.765699 TGCTTTCCTTTGGAGTTTTGCT 59.234 40.909 0.00 0.00 31.21 3.91
7679 8106 3.126073 CTGCTTTCCTTTGGAGTTTTGC 58.874 45.455 0.00 0.00 31.21 3.68
7680 8107 4.654091 TCTGCTTTCCTTTGGAGTTTTG 57.346 40.909 0.00 0.00 31.21 2.44
7681 8108 5.876651 ATTCTGCTTTCCTTTGGAGTTTT 57.123 34.783 0.00 0.00 31.21 2.43
7682 8109 5.221521 GGAATTCTGCTTTCCTTTGGAGTTT 60.222 40.000 5.23 0.00 39.67 2.66
7683 8110 4.281941 GGAATTCTGCTTTCCTTTGGAGTT 59.718 41.667 5.23 0.00 39.67 3.01
7684 8111 3.829026 GGAATTCTGCTTTCCTTTGGAGT 59.171 43.478 5.23 0.00 39.67 3.85
7685 8112 3.828451 TGGAATTCTGCTTTCCTTTGGAG 59.172 43.478 5.23 0.00 42.63 3.86
7686 8113 3.843422 TGGAATTCTGCTTTCCTTTGGA 58.157 40.909 5.23 0.00 42.63 3.53
7687 8114 4.605640 TTGGAATTCTGCTTTCCTTTGG 57.394 40.909 5.23 0.00 42.63 3.28
7688 8115 6.282930 TCTTTTGGAATTCTGCTTTCCTTTG 58.717 36.000 5.23 0.00 42.63 2.77
7689 8116 6.484364 TCTTTTGGAATTCTGCTTTCCTTT 57.516 33.333 5.23 0.00 42.63 3.11
7690 8117 6.484364 TTCTTTTGGAATTCTGCTTTCCTT 57.516 33.333 5.23 0.00 42.63 3.36
7691 8118 6.496218 AGATTCTTTTGGAATTCTGCTTTCCT 59.504 34.615 5.23 0.00 43.90 3.36
7692 8119 6.695429 AGATTCTTTTGGAATTCTGCTTTCC 58.305 36.000 5.23 0.00 43.90 3.13
7693 8120 7.869429 TGAAGATTCTTTTGGAATTCTGCTTTC 59.131 33.333 5.23 0.00 43.90 2.62
7694 8121 7.729116 TGAAGATTCTTTTGGAATTCTGCTTT 58.271 30.769 5.23 0.00 43.90 3.51
7703 8148 4.214310 TGGCACTGAAGATTCTTTTGGAA 58.786 39.130 0.00 0.00 38.41 3.53
7783 8236 7.665559 TGATTTGGGTCATACTCCTATTTATGC 59.334 37.037 0.00 0.00 0.00 3.14
7784 8237 9.573166 TTGATTTGGGTCATACTCCTATTTATG 57.427 33.333 0.00 0.00 0.00 1.90
7785 8238 9.574516 GTTGATTTGGGTCATACTCCTATTTAT 57.425 33.333 0.00 0.00 0.00 1.40
7786 8239 8.553153 TGTTGATTTGGGTCATACTCCTATTTA 58.447 33.333 0.00 0.00 0.00 1.40
7787 8240 7.410174 TGTTGATTTGGGTCATACTCCTATTT 58.590 34.615 0.00 0.00 0.00 1.40
7788 8241 6.969043 TGTTGATTTGGGTCATACTCCTATT 58.031 36.000 0.00 0.00 0.00 1.73
7789 8242 6.575244 TGTTGATTTGGGTCATACTCCTAT 57.425 37.500 0.00 0.00 0.00 2.57
7790 8243 6.575244 ATGTTGATTTGGGTCATACTCCTA 57.425 37.500 0.00 0.00 0.00 2.94
7791 8244 4.927267 TGTTGATTTGGGTCATACTCCT 57.073 40.909 0.00 0.00 0.00 3.69
7792 8245 6.039382 GGTTATGTTGATTTGGGTCATACTCC 59.961 42.308 0.00 0.00 0.00 3.85
7793 8246 6.601613 TGGTTATGTTGATTTGGGTCATACTC 59.398 38.462 0.00 0.00 0.00 2.59
7794 8247 6.489603 TGGTTATGTTGATTTGGGTCATACT 58.510 36.000 0.00 0.00 0.00 2.12
7795 8248 6.377146 ACTGGTTATGTTGATTTGGGTCATAC 59.623 38.462 0.00 0.00 0.00 2.39
7914 8394 2.418976 GCTTACAAGGGTGAAATCGACC 59.581 50.000 0.00 0.00 0.00 4.79
7988 8468 0.674534 CCTAGATACACCCAGGTCGC 59.325 60.000 0.00 0.00 0.00 5.19
8014 8494 1.522258 CGGTTGCATTGTGCTTGTTTC 59.478 47.619 3.41 0.00 45.31 2.78
8073 8573 7.603180 TGCTAACACAGAGACCATCTATATT 57.397 36.000 0.00 0.00 36.10 1.28
8075 8575 7.093509 TGTTTGCTAACACAGAGACCATCTATA 60.094 37.037 9.74 0.00 39.29 1.31
8104 8604 1.528129 GAGTAACTTGGCAGCTGCTT 58.472 50.000 35.82 24.58 41.70 3.91
8112 8612 1.188863 TACGGAGGGAGTAACTTGGC 58.811 55.000 0.00 0.00 0.00 4.52
8113 8613 3.512724 TCTTTACGGAGGGAGTAACTTGG 59.487 47.826 0.00 0.00 34.25 3.61
8115 8615 5.813513 TTTCTTTACGGAGGGAGTAACTT 57.186 39.130 0.00 0.00 34.25 2.66
8120 8620 9.993454 GTTTATATATTTCTTTACGGAGGGAGT 57.007 33.333 0.00 0.00 0.00 3.85
8121 8621 9.136952 CGTTTATATATTTCTTTACGGAGGGAG 57.863 37.037 0.00 0.00 0.00 4.30
8122 8622 7.599998 GCGTTTATATATTTCTTTACGGAGGGA 59.400 37.037 0.00 0.00 0.00 4.20
8123 8623 7.601508 AGCGTTTATATATTTCTTTACGGAGGG 59.398 37.037 0.00 0.00 0.00 4.30
8124 8624 8.530269 AGCGTTTATATATTTCTTTACGGAGG 57.470 34.615 0.00 0.00 0.00 4.30
8125 8625 9.408069 AGAGCGTTTATATATTTCTTTACGGAG 57.592 33.333 0.00 0.00 0.00 4.63
8126 8626 9.754382 AAGAGCGTTTATATATTTCTTTACGGA 57.246 29.630 0.00 0.00 0.00 4.69
8143 8643 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
8144 8644 7.280205 CCCTCTGTAAACAAATATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
8145 8645 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
8146 8646 6.984474 TCCCTCTGTAAACAAATATAAGAGCG 59.016 38.462 0.00 0.00 0.00 5.03
8147 8647 7.988028 ACTCCCTCTGTAAACAAATATAAGAGC 59.012 37.037 0.00 0.00 0.00 4.09
8153 8653 9.047947 AGAAGTACTCCCTCTGTAAACAAATAT 57.952 33.333 0.00 0.00 0.00 1.28
8154 8654 8.311836 CAGAAGTACTCCCTCTGTAAACAAATA 58.688 37.037 12.94 0.00 0.00 1.40
8155 8655 7.162082 CAGAAGTACTCCCTCTGTAAACAAAT 58.838 38.462 12.94 0.00 0.00 2.32
8156 8656 6.522054 CAGAAGTACTCCCTCTGTAAACAAA 58.478 40.000 12.94 0.00 0.00 2.83
8157 8657 6.097915 CAGAAGTACTCCCTCTGTAAACAA 57.902 41.667 12.94 0.00 0.00 2.83
8158 8658 5.723672 CAGAAGTACTCCCTCTGTAAACA 57.276 43.478 12.94 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.