Multiple sequence alignment - TraesCS7B01G478300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G478300 chr7B 100.000 4940 0 0 1 4940 733536622 733531683 0.000000e+00 9123.0
1 TraesCS7B01G478300 chr7B 81.443 1843 288 34 1334 3154 733308771 733310581 0.000000e+00 1459.0
2 TraesCS7B01G478300 chr7B 81.087 1914 274 57 1331 3185 733081082 733082966 0.000000e+00 1448.0
3 TraesCS7B01G478300 chr7B 82.435 1002 161 11 2178 3167 733142485 733143483 0.000000e+00 861.0
4 TraesCS7B01G478300 chr7B 80.395 811 128 22 1334 2132 733296833 733297624 5.510000e-164 588.0
5 TraesCS7B01G478300 chr7B 78.934 788 133 17 1345 2118 733028637 733029405 5.710000e-139 505.0
6 TraesCS7B01G478300 chr7B 83.092 207 27 6 3990 4193 733084449 733084650 1.090000e-41 182.0
7 TraesCS7B01G478300 chr7B 79.581 191 31 8 4010 4193 733152469 733152658 4.010000e-26 130.0
8 TraesCS7B01G478300 chr7B 83.051 118 20 0 4821 4938 733312712 733312595 1.880000e-19 108.0
9 TraesCS7B01G478300 chr7B 80.272 147 22 4 4046 4192 733312584 733312723 2.430000e-18 104.0
10 TraesCS7B01G478300 chr7D 91.118 2961 186 35 68 2997 630520454 630523368 0.000000e+00 3940.0
11 TraesCS7B01G478300 chr7D 81.373 1879 282 44 1331 3178 630502910 630504751 0.000000e+00 1469.0
12 TraesCS7B01G478300 chr7D 80.560 1893 294 47 1331 3195 630253316 630255162 0.000000e+00 1389.0
13 TraesCS7B01G478300 chr7D 89.335 722 60 9 3864 4580 630523876 630524585 0.000000e+00 891.0
14 TraesCS7B01G478300 chr7D 90.419 334 26 3 4609 4940 630524582 630524911 7.590000e-118 435.0
15 TraesCS7B01G478300 chr7D 79.115 565 88 14 1331 1878 630272875 630273426 3.630000e-96 363.0
16 TraesCS7B01G478300 chr7D 91.892 185 14 1 3558 3742 630523543 630523726 1.760000e-64 257.0
17 TraesCS7B01G478300 chr7D 87.324 71 9 0 3293 3363 630523368 630523438 1.140000e-11 82.4
18 TraesCS7B01G478300 chr7A 89.167 1800 100 40 419 2151 726473729 726475500 0.000000e+00 2156.0
19 TraesCS7B01G478300 chr7A 94.019 836 45 4 2158 2991 726475671 726476503 0.000000e+00 1262.0
20 TraesCS7B01G478300 chr7A 88.806 804 62 15 3864 4664 726477053 726477831 0.000000e+00 961.0
21 TraesCS7B01G478300 chr7A 89.164 323 32 2 3422 3742 726476598 726476919 2.770000e-107 399.0
22 TraesCS7B01G478300 chr7A 89.474 190 12 2 4751 4940 726477872 726478053 2.970000e-57 233.0
23 TraesCS7B01G478300 chr6B 83.469 986 152 8 2178 3154 662031151 662030168 0.000000e+00 907.0
24 TraesCS7B01G478300 chr3B 77.755 971 189 19 2171 3129 20452486 20451531 5.550000e-159 571.0
25 TraesCS7B01G478300 chr1B 74.803 889 177 40 2254 3120 658354366 658355229 1.690000e-94 357.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G478300 chr7B 733531683 733536622 4939 True 9123.00 9123 100.0000 1 4940 1 chr7B.!!$R2 4939
1 TraesCS7B01G478300 chr7B 733142485 733143483 998 False 861.00 861 82.4350 2178 3167 1 chr7B.!!$F2 989
2 TraesCS7B01G478300 chr7B 733081082 733084650 3568 False 815.00 1448 82.0895 1331 4193 2 chr7B.!!$F5 2862
3 TraesCS7B01G478300 chr7B 733308771 733312723 3952 False 781.50 1459 80.8575 1334 4192 2 chr7B.!!$F6 2858
4 TraesCS7B01G478300 chr7B 733296833 733297624 791 False 588.00 588 80.3950 1334 2132 1 chr7B.!!$F4 798
5 TraesCS7B01G478300 chr7B 733028637 733029405 768 False 505.00 505 78.9340 1345 2118 1 chr7B.!!$F1 773
6 TraesCS7B01G478300 chr7D 630502910 630504751 1841 False 1469.00 1469 81.3730 1331 3178 1 chr7D.!!$F3 1847
7 TraesCS7B01G478300 chr7D 630253316 630255162 1846 False 1389.00 1389 80.5600 1331 3195 1 chr7D.!!$F1 1864
8 TraesCS7B01G478300 chr7D 630520454 630524911 4457 False 1121.08 3940 90.0176 68 4940 5 chr7D.!!$F4 4872
9 TraesCS7B01G478300 chr7D 630272875 630273426 551 False 363.00 363 79.1150 1331 1878 1 chr7D.!!$F2 547
10 TraesCS7B01G478300 chr7A 726473729 726478053 4324 False 1002.20 2156 90.1260 419 4940 5 chr7A.!!$F1 4521
11 TraesCS7B01G478300 chr6B 662030168 662031151 983 True 907.00 907 83.4690 2178 3154 1 chr6B.!!$R1 976
12 TraesCS7B01G478300 chr3B 20451531 20452486 955 True 571.00 571 77.7550 2171 3129 1 chr3B.!!$R1 958
13 TraesCS7B01G478300 chr1B 658354366 658355229 863 False 357.00 357 74.8030 2254 3120 1 chr1B.!!$F1 866

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.035317 TGCTCACCAGAATTCGCAGT 59.965 50.0 0.00 0.0 0.00 4.40 F
1045 1068 0.105039 GGAAGGGATGCTCACCGTAG 59.895 60.0 0.00 0.0 0.00 3.51 F
1605 1684 0.395686 ATGACATGGAGATGGAGGCG 59.604 55.0 0.00 0.0 33.39 5.52 F
3167 3475 0.255890 GTAGGATCCCAGCCTTTGCA 59.744 55.0 8.55 0.0 41.13 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1276 1352 0.251121 TACACAGGTGCCATGGGTTG 60.251 55.000 15.13 0.63 35.47 3.77 R
2689 2984 1.947456 GTGCGGAAGATCCCAATAACC 59.053 52.381 0.00 0.00 31.13 2.85 R
3203 3511 0.033601 AAGGCACCACCACTTTGTCA 60.034 50.000 0.00 0.00 43.14 3.58 R
4272 6412 0.756294 TCTCCTGTTTTGTGCCTCGA 59.244 50.000 0.00 0.00 0.00 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.665833 GCCCAAACTCCCAATATTTACC 57.334 45.455 0.00 0.00 0.00 2.85
22 23 4.027437 GCCCAAACTCCCAATATTTACCA 58.973 43.478 0.00 0.00 0.00 3.25
23 24 4.099419 GCCCAAACTCCCAATATTTACCAG 59.901 45.833 0.00 0.00 0.00 4.00
24 25 5.515106 CCCAAACTCCCAATATTTACCAGA 58.485 41.667 0.00 0.00 0.00 3.86
25 26 5.955355 CCCAAACTCCCAATATTTACCAGAA 59.045 40.000 0.00 0.00 0.00 3.02
26 27 6.611236 CCCAAACTCCCAATATTTACCAGAAT 59.389 38.462 0.00 0.00 0.00 2.40
27 28 7.201911 CCCAAACTCCCAATATTTACCAGAATC 60.202 40.741 0.00 0.00 0.00 2.52
28 29 7.201911 CCAAACTCCCAATATTTACCAGAATCC 60.202 40.741 0.00 0.00 0.00 3.01
29 30 5.953571 ACTCCCAATATTTACCAGAATCCC 58.046 41.667 0.00 0.00 0.00 3.85
30 31 4.980573 TCCCAATATTTACCAGAATCCCG 58.019 43.478 0.00 0.00 0.00 5.14
31 32 3.506067 CCCAATATTTACCAGAATCCCGC 59.494 47.826 0.00 0.00 0.00 6.13
32 33 4.398319 CCAATATTTACCAGAATCCCGCT 58.602 43.478 0.00 0.00 0.00 5.52
33 34 4.827284 CCAATATTTACCAGAATCCCGCTT 59.173 41.667 0.00 0.00 0.00 4.68
34 35 5.301805 CCAATATTTACCAGAATCCCGCTTT 59.698 40.000 0.00 0.00 0.00 3.51
35 36 6.208644 CAATATTTACCAGAATCCCGCTTTG 58.791 40.000 0.00 0.00 0.00 2.77
36 37 1.459450 TTACCAGAATCCCGCTTTGC 58.541 50.000 0.00 0.00 0.00 3.68
37 38 0.618458 TACCAGAATCCCGCTTTGCT 59.382 50.000 0.00 0.00 0.00 3.91
38 39 0.678048 ACCAGAATCCCGCTTTGCTC 60.678 55.000 0.00 0.00 0.00 4.26
39 40 0.677731 CCAGAATCCCGCTTTGCTCA 60.678 55.000 0.00 0.00 0.00 4.26
40 41 0.449388 CAGAATCCCGCTTTGCTCAC 59.551 55.000 0.00 0.00 0.00 3.51
41 42 0.678048 AGAATCCCGCTTTGCTCACC 60.678 55.000 0.00 0.00 0.00 4.02
42 43 0.960364 GAATCCCGCTTTGCTCACCA 60.960 55.000 0.00 0.00 0.00 4.17
43 44 0.962356 AATCCCGCTTTGCTCACCAG 60.962 55.000 0.00 0.00 0.00 4.00
44 45 1.841302 ATCCCGCTTTGCTCACCAGA 61.841 55.000 0.00 0.00 0.00 3.86
45 46 1.600636 CCCGCTTTGCTCACCAGAA 60.601 57.895 0.00 0.00 0.00 3.02
46 47 0.962356 CCCGCTTTGCTCACCAGAAT 60.962 55.000 0.00 0.00 0.00 2.40
47 48 0.883833 CCGCTTTGCTCACCAGAATT 59.116 50.000 0.00 0.00 0.00 2.17
48 49 1.135575 CCGCTTTGCTCACCAGAATTC 60.136 52.381 0.00 0.00 0.00 2.17
49 50 1.464687 CGCTTTGCTCACCAGAATTCG 60.465 52.381 0.00 0.00 0.00 3.34
50 51 1.730446 GCTTTGCTCACCAGAATTCGC 60.730 52.381 0.00 0.00 0.00 4.70
51 52 1.536766 CTTTGCTCACCAGAATTCGCA 59.463 47.619 0.00 0.00 0.00 5.10
52 53 1.159285 TTGCTCACCAGAATTCGCAG 58.841 50.000 0.00 0.00 0.00 5.18
53 54 0.035317 TGCTCACCAGAATTCGCAGT 59.965 50.000 0.00 0.00 0.00 4.40
54 55 0.445436 GCTCACCAGAATTCGCAGTG 59.555 55.000 15.33 15.33 0.00 3.66
55 56 0.445436 CTCACCAGAATTCGCAGTGC 59.555 55.000 4.58 4.58 0.00 4.40
56 57 0.955428 TCACCAGAATTCGCAGTGCC 60.955 55.000 10.11 0.00 0.00 5.01
57 58 1.675641 ACCAGAATTCGCAGTGCCC 60.676 57.895 10.11 0.00 0.00 5.36
58 59 2.753966 CCAGAATTCGCAGTGCCCG 61.754 63.158 10.11 0.00 0.00 6.13
59 60 2.034879 CAGAATTCGCAGTGCCCGT 61.035 57.895 10.11 0.00 0.00 5.28
60 61 0.739462 CAGAATTCGCAGTGCCCGTA 60.739 55.000 10.11 0.00 0.00 4.02
61 62 0.178068 AGAATTCGCAGTGCCCGTAT 59.822 50.000 10.11 0.00 0.00 3.06
62 63 1.014352 GAATTCGCAGTGCCCGTATT 58.986 50.000 10.11 2.07 0.00 1.89
63 64 2.159014 AGAATTCGCAGTGCCCGTATTA 60.159 45.455 10.11 0.00 0.00 0.98
64 65 2.543777 ATTCGCAGTGCCCGTATTAT 57.456 45.000 10.11 0.00 0.00 1.28
65 66 1.860676 TTCGCAGTGCCCGTATTATC 58.139 50.000 10.11 0.00 0.00 1.75
66 67 0.747852 TCGCAGTGCCCGTATTATCA 59.252 50.000 10.11 0.00 0.00 2.15
67 68 1.343142 TCGCAGTGCCCGTATTATCAT 59.657 47.619 10.11 0.00 0.00 2.45
68 69 2.143122 CGCAGTGCCCGTATTATCATT 58.857 47.619 10.11 0.00 0.00 2.57
69 70 2.157668 CGCAGTGCCCGTATTATCATTC 59.842 50.000 10.11 0.00 0.00 2.67
70 71 2.484264 GCAGTGCCCGTATTATCATTCC 59.516 50.000 2.85 0.00 0.00 3.01
71 72 3.807209 GCAGTGCCCGTATTATCATTCCT 60.807 47.826 2.85 0.00 0.00 3.36
72 73 4.389374 CAGTGCCCGTATTATCATTCCTT 58.611 43.478 0.00 0.00 0.00 3.36
73 74 4.821805 CAGTGCCCGTATTATCATTCCTTT 59.178 41.667 0.00 0.00 0.00 3.11
81 82 9.587772 CCCGTATTATCATTCCTTTAGACATAG 57.412 37.037 0.00 0.00 0.00 2.23
93 94 1.668826 AGACATAGCCCAAACTCCCA 58.331 50.000 0.00 0.00 0.00 4.37
94 95 1.992557 AGACATAGCCCAAACTCCCAA 59.007 47.619 0.00 0.00 0.00 4.12
110 111 7.587037 AACTCCCAATATTTGACATACCATG 57.413 36.000 0.00 0.00 0.00 3.66
123 124 3.117550 ACATACCATGCCATACCATGTGT 60.118 43.478 0.00 0.00 40.72 3.72
139 140 6.189859 ACCATGTGTGAATCCAACATAATCT 58.810 36.000 0.00 0.00 33.31 2.40
140 141 7.345691 ACCATGTGTGAATCCAACATAATCTA 58.654 34.615 0.00 0.00 33.31 1.98
169 170 4.016444 TCTTGTATTCAAATCCACAGCCC 58.984 43.478 0.00 0.00 32.87 5.19
170 171 3.737559 TGTATTCAAATCCACAGCCCT 57.262 42.857 0.00 0.00 0.00 5.19
171 172 4.853468 TGTATTCAAATCCACAGCCCTA 57.147 40.909 0.00 0.00 0.00 3.53
172 173 4.523083 TGTATTCAAATCCACAGCCCTAC 58.477 43.478 0.00 0.00 0.00 3.18
177 178 5.808366 TCAAATCCACAGCCCTACTATAG 57.192 43.478 0.00 0.00 0.00 1.31
204 205 4.283978 TCCCGCTTCCATATCCGTATAAAA 59.716 41.667 0.00 0.00 0.00 1.52
243 244 6.318396 GGTATGAGAGTTATCCTACCGTATCC 59.682 46.154 0.00 0.00 0.00 2.59
262 263 2.029649 TCCACTCCGGTTTCGTTCTAAG 60.030 50.000 0.00 0.00 35.57 2.18
269 270 3.435671 CCGGTTTCGTTCTAAGAAGCAAT 59.564 43.478 0.00 0.00 31.71 3.56
296 297 7.925483 CCACTTATCTCTTTGAATCCTCTACAG 59.075 40.741 0.00 0.00 0.00 2.74
319 320 0.526662 TCGAGGGAAAAGCTCGAGAC 59.473 55.000 18.75 7.74 43.41 3.36
360 361 6.635030 ACAAACATCAACCTTCTCCTAAAC 57.365 37.500 0.00 0.00 0.00 2.01
444 448 1.277273 TGGAGAGAACATGGCAGTGAG 59.723 52.381 0.00 0.00 0.00 3.51
445 449 1.552337 GGAGAGAACATGGCAGTGAGA 59.448 52.381 0.00 0.00 0.00 3.27
446 450 2.027745 GGAGAGAACATGGCAGTGAGAA 60.028 50.000 0.00 0.00 0.00 2.87
455 459 3.117491 TGGCAGTGAGAAGAAGAACAG 57.883 47.619 0.00 0.00 0.00 3.16
488 492 8.592529 ACTTTTCTTAACTACCCCTAGACTAG 57.407 38.462 2.18 2.18 0.00 2.57
494 498 5.385628 AACTACCCCTAGACTAGTGTAGG 57.614 47.826 30.59 30.59 43.90 3.18
522 526 7.308435 CAGCACTTAGGGTTCAAAAATAGAAG 58.692 38.462 0.00 0.00 0.00 2.85
523 527 6.434340 AGCACTTAGGGTTCAAAAATAGAAGG 59.566 38.462 0.00 0.00 0.00 3.46
524 528 6.433093 GCACTTAGGGTTCAAAAATAGAAGGA 59.567 38.462 0.00 0.00 0.00 3.36
566 570 3.219176 TGGATCTTGGATGAATGCTCC 57.781 47.619 0.00 0.00 0.00 4.70
613 617 4.377897 GGAGACCTGTTTTGTATATCGGG 58.622 47.826 0.00 0.00 0.00 5.14
628 632 0.906282 TCGGGGTTAGTCAAGGGGTC 60.906 60.000 0.00 0.00 0.00 4.46
629 633 1.907222 CGGGGTTAGTCAAGGGGTCC 61.907 65.000 0.00 0.00 0.00 4.46
638 646 2.040412 AGTCAAGGGGTCCTCATGAAAC 59.960 50.000 0.00 0.00 30.89 2.78
650 658 3.064545 CCTCATGAAACGAATGGAGCTTC 59.935 47.826 0.00 0.00 0.00 3.86
694 704 2.835580 AGAGCATCCATCCAAGATCG 57.164 50.000 0.00 0.00 33.66 3.69
695 705 2.323599 AGAGCATCCATCCAAGATCGA 58.676 47.619 0.00 0.00 33.66 3.59
715 725 1.374505 CGGCCCATTTTGTGCCTTG 60.375 57.895 0.00 0.00 43.12 3.61
729 739 2.541762 GTGCCTTGATCGATCTTAGCAC 59.458 50.000 31.73 31.73 38.39 4.40
771 781 2.733552 CTGACAGAACATCCAGTGAACG 59.266 50.000 0.00 0.00 0.00 3.95
781 791 1.000506 TCCAGTGAACGTGAACCTAGC 59.999 52.381 0.00 0.00 0.00 3.42
782 792 1.000955 CCAGTGAACGTGAACCTAGCT 59.999 52.381 0.00 0.00 0.00 3.32
783 793 2.230508 CCAGTGAACGTGAACCTAGCTA 59.769 50.000 0.00 0.00 0.00 3.32
784 794 3.502920 CAGTGAACGTGAACCTAGCTAG 58.497 50.000 14.20 14.20 0.00 3.42
785 795 3.057456 CAGTGAACGTGAACCTAGCTAGT 60.057 47.826 19.31 1.46 0.00 2.57
786 796 3.057456 AGTGAACGTGAACCTAGCTAGTG 60.057 47.826 19.31 12.85 0.00 2.74
787 797 3.057736 GTGAACGTGAACCTAGCTAGTGA 60.058 47.826 19.31 0.00 0.00 3.41
796 806 6.932960 GTGAACCTAGCTAGTGAACCTAAAAA 59.067 38.462 19.31 0.00 0.00 1.94
797 807 7.117956 GTGAACCTAGCTAGTGAACCTAAAAAG 59.882 40.741 19.31 2.01 0.00 2.27
819 829 2.202987 CCATGCTCCAGCGAGGTC 60.203 66.667 0.00 0.00 45.83 3.85
869 879 5.277538 GCTCTCCGAAATATTTTAGTGCCTG 60.278 44.000 1.43 0.00 0.00 4.85
880 890 2.607631 TAGTGCCTGGGTTATAACGC 57.392 50.000 22.17 22.17 41.69 4.84
888 898 1.134521 TGGGTTATAACGCAGCCTCTG 60.135 52.381 26.32 0.00 45.34 3.35
908 918 1.270785 GGTGGTTTTGCCTTTGATGGG 60.271 52.381 0.00 0.00 38.35 4.00
909 919 1.691434 GTGGTTTTGCCTTTGATGGGA 59.309 47.619 0.00 0.00 38.35 4.37
910 920 1.691434 TGGTTTTGCCTTTGATGGGAC 59.309 47.619 0.00 0.00 38.35 4.46
1008 1021 7.885399 ACTTGGTTGCTAAGATAGATCAAAAGT 59.115 33.333 0.00 0.00 0.00 2.66
1009 1022 7.615582 TGGTTGCTAAGATAGATCAAAAGTG 57.384 36.000 0.00 0.00 0.00 3.16
1010 1023 7.168219 TGGTTGCTAAGATAGATCAAAAGTGT 58.832 34.615 0.00 0.00 0.00 3.55
1015 1028 7.981789 TGCTAAGATAGATCAAAAGTGTACCAG 59.018 37.037 0.00 0.00 0.00 4.00
1017 1030 6.240549 AGATAGATCAAAAGTGTACCAGGG 57.759 41.667 0.00 0.00 0.00 4.45
1018 1031 3.073274 AGATCAAAAGTGTACCAGGGC 57.927 47.619 0.00 0.00 0.00 5.19
1040 1063 0.257039 ACATGGGAAGGGATGCTCAC 59.743 55.000 0.00 0.00 0.00 3.51
1045 1068 0.105039 GGAAGGGATGCTCACCGTAG 59.895 60.000 0.00 0.00 0.00 3.51
1066 1111 6.915843 CGTAGTTGTTTATCTTTGGTTTGCTT 59.084 34.615 0.00 0.00 0.00 3.91
1067 1112 7.096640 CGTAGTTGTTTATCTTTGGTTTGCTTG 60.097 37.037 0.00 0.00 0.00 4.01
1073 1118 6.662865 TTATCTTTGGTTTGCTTGGATTCA 57.337 33.333 0.00 0.00 0.00 2.57
1074 1119 5.750352 ATCTTTGGTTTGCTTGGATTCAT 57.250 34.783 0.00 0.00 0.00 2.57
1075 1120 4.885413 TCTTTGGTTTGCTTGGATTCATG 58.115 39.130 0.00 0.00 0.00 3.07
1080 1125 3.119352 GGTTTGCTTGGATTCATGAGTCC 60.119 47.826 26.17 26.17 37.68 3.85
1128 1173 1.895707 CTCATGCGATGGGCTTCCC 60.896 63.158 0.00 0.00 45.71 3.97
1193 1267 3.731728 GCTCCTCCACCATGGCCA 61.732 66.667 13.04 8.56 37.47 5.36
1199 1273 2.600173 CCACCATGGCCAAACCGT 60.600 61.111 10.96 0.00 43.94 4.83
1256 1332 3.004752 ACACCATTACTCCATCCAAGC 57.995 47.619 0.00 0.00 0.00 4.01
1257 1333 2.578021 ACACCATTACTCCATCCAAGCT 59.422 45.455 0.00 0.00 0.00 3.74
1258 1334 3.780294 ACACCATTACTCCATCCAAGCTA 59.220 43.478 0.00 0.00 0.00 3.32
1259 1335 4.141620 ACACCATTACTCCATCCAAGCTAG 60.142 45.833 0.00 0.00 0.00 3.42
1269 1345 4.130118 CCATCCAAGCTAGTATCCAACAC 58.870 47.826 0.00 0.00 0.00 3.32
1270 1346 3.906720 TCCAAGCTAGTATCCAACACC 57.093 47.619 0.00 0.00 0.00 4.16
1271 1347 3.178046 TCCAAGCTAGTATCCAACACCA 58.822 45.455 0.00 0.00 0.00 4.17
1272 1348 3.197766 TCCAAGCTAGTATCCAACACCAG 59.802 47.826 0.00 0.00 0.00 4.00
1276 1352 2.906354 CTAGTATCCAACACCAGCCAC 58.094 52.381 0.00 0.00 0.00 5.01
1314 1393 3.266282 GCGGCTAGCTTCTTCTCTC 57.734 57.895 15.72 0.00 44.04 3.20
1466 1545 0.463204 ACGATGCAGATCCTGGTGAG 59.537 55.000 0.00 0.00 31.21 3.51
1533 1612 1.344953 TGGGTAGCATGCGGGATCTT 61.345 55.000 13.01 0.00 0.00 2.40
1587 1666 1.810030 GCTCCGCCTCGACGAAAAT 60.810 57.895 0.00 0.00 34.06 1.82
1605 1684 0.395686 ATGACATGGAGATGGAGGCG 59.604 55.000 0.00 0.00 33.39 5.52
1716 1795 1.282930 GCGTCGTTGAGGAAGGTGAC 61.283 60.000 0.00 0.00 0.00 3.67
1971 2081 2.029844 GTGCCGAGCTTCTGTGTCC 61.030 63.158 0.00 0.00 0.00 4.02
2010 2120 2.872245 CCGTGACAAGCTCTTGAAAGAA 59.128 45.455 15.74 0.00 42.93 2.52
2365 2660 8.495949 GCAGAATAATTGTTACTACACGCATAT 58.504 33.333 0.00 0.00 32.98 1.78
2502 2797 1.118838 CCTGCCCTCCTCAACTAGAG 58.881 60.000 0.00 0.00 44.31 2.43
2565 2860 5.723295 CCATTGGCTATAATTACCATTGCC 58.277 41.667 5.50 5.50 42.45 4.52
2721 3016 0.534203 TTCCGCACCACTTGAAGACC 60.534 55.000 0.00 0.00 0.00 3.85
2722 3017 1.227823 CCGCACCACTTGAAGACCA 60.228 57.895 0.00 0.00 0.00 4.02
2733 3028 7.174946 CACCACTTGAAGACCAGTTTGTTATAT 59.825 37.037 0.00 0.00 0.00 0.86
2734 3029 7.390718 ACCACTTGAAGACCAGTTTGTTATATC 59.609 37.037 0.00 0.00 0.00 1.63
2983 3284 4.635765 TGTCAGATTAGGAGAATTTTGCCG 59.364 41.667 0.00 0.00 0.00 5.69
2997 3302 0.955905 TTGCCGCTGTTTAAAGGGTC 59.044 50.000 0.00 0.00 0.00 4.46
3008 3316 5.606505 TGTTTAAAGGGTCTTTGCAATTCC 58.393 37.500 0.00 3.20 0.00 3.01
3048 3356 1.488393 GGCTCTCCCTGCAATCTAGTT 59.512 52.381 0.00 0.00 0.00 2.24
3061 3369 2.859165 TCTAGTTGGGCTTGAACAGG 57.141 50.000 0.00 0.00 0.00 4.00
3067 3375 1.979155 GGGCTTGAACAGGAAGGGC 60.979 63.158 0.00 0.00 0.00 5.19
3101 3409 5.330295 CATCAGAAGAAGCAAGTTACATGC 58.670 41.667 4.25 4.25 44.15 4.06
3131 3439 6.690957 TCATTGAATGTGTTCGAAGAAACAAC 59.309 34.615 4.93 9.36 45.90 3.32
3135 3443 2.098870 GTGTTCGAAGAAACAACGCAC 58.901 47.619 0.00 0.00 45.90 5.34
3140 3448 3.386486 TCGAAGAAACAACGCACATACT 58.614 40.909 0.00 0.00 0.00 2.12
3141 3449 3.183574 TCGAAGAAACAACGCACATACTG 59.816 43.478 0.00 0.00 0.00 2.74
3150 3458 1.001520 ACGCACATACTGCCACTTGTA 59.998 47.619 0.00 0.00 43.84 2.41
3152 3460 2.009774 GCACATACTGCCACTTGTAGG 58.990 52.381 0.00 0.00 40.42 3.18
3153 3461 2.354704 GCACATACTGCCACTTGTAGGA 60.355 50.000 0.00 0.00 40.42 2.94
3155 3463 4.122776 CACATACTGCCACTTGTAGGATC 58.877 47.826 0.00 0.00 25.56 3.36
3160 3468 0.464554 GCCACTTGTAGGATCCCAGC 60.465 60.000 8.55 0.00 0.00 4.85
3167 3475 0.255890 GTAGGATCCCAGCCTTTGCA 59.744 55.000 8.55 0.00 41.13 4.08
3169 3477 1.304381 GGATCCCAGCCTTTGCACA 60.304 57.895 0.00 0.00 41.13 4.57
3178 3486 3.395639 CAGCCTTTGCACATGTTTGATT 58.604 40.909 0.00 0.00 41.13 2.57
3179 3487 3.430895 CAGCCTTTGCACATGTTTGATTC 59.569 43.478 0.00 0.00 41.13 2.52
3213 3521 4.433186 TTTTCTGTGTGTGACAAAGTGG 57.567 40.909 0.00 0.00 35.00 4.00
3214 3522 2.779755 TCTGTGTGTGACAAAGTGGT 57.220 45.000 0.00 0.00 35.00 4.16
3215 3523 2.355197 TCTGTGTGTGACAAAGTGGTG 58.645 47.619 0.00 0.00 35.00 4.17
3216 3524 1.401552 CTGTGTGTGACAAAGTGGTGG 59.598 52.381 0.00 0.00 32.80 4.61
3217 3525 1.271652 TGTGTGTGACAAAGTGGTGGT 60.272 47.619 0.00 0.00 0.00 4.16
3218 3526 1.132262 GTGTGTGACAAAGTGGTGGTG 59.868 52.381 0.00 0.00 0.00 4.17
3219 3527 0.100503 GTGTGACAAAGTGGTGGTGC 59.899 55.000 0.00 0.00 0.00 5.01
3220 3528 1.034838 TGTGACAAAGTGGTGGTGCC 61.035 55.000 0.00 0.00 37.90 5.01
3221 3529 0.751643 GTGACAAAGTGGTGGTGCCT 60.752 55.000 0.00 0.00 38.35 4.75
3222 3530 0.033601 TGACAAAGTGGTGGTGCCTT 60.034 50.000 0.00 0.00 38.35 4.35
3223 3531 1.111277 GACAAAGTGGTGGTGCCTTT 58.889 50.000 0.00 0.00 38.35 3.11
3224 3532 0.823460 ACAAAGTGGTGGTGCCTTTG 59.177 50.000 9.19 9.19 46.55 2.77
3225 3533 0.104671 CAAAGTGGTGGTGCCTTTGG 59.895 55.000 0.00 0.00 40.70 3.28
3236 3544 3.061848 CCTTTGGCGCCGACCATT 61.062 61.111 23.90 0.00 40.13 3.16
3237 3545 2.179018 CTTTGGCGCCGACCATTG 59.821 61.111 23.90 3.41 40.13 2.82
3238 3546 2.281831 TTTGGCGCCGACCATTGA 60.282 55.556 23.90 0.00 40.13 2.57
3239 3547 1.656818 CTTTGGCGCCGACCATTGAT 61.657 55.000 23.90 0.00 40.13 2.57
3240 3548 1.653094 TTTGGCGCCGACCATTGATC 61.653 55.000 23.90 0.00 40.13 2.92
3241 3549 2.203070 GGCGCCGACCATTGATCT 60.203 61.111 12.58 0.00 0.00 2.75
3242 3550 2.247437 GGCGCCGACCATTGATCTC 61.247 63.158 12.58 0.00 0.00 2.75
3243 3551 1.521457 GCGCCGACCATTGATCTCA 60.521 57.895 0.00 0.00 0.00 3.27
3244 3552 1.089481 GCGCCGACCATTGATCTCAA 61.089 55.000 0.00 0.00 40.51 3.02
3245 3553 1.586422 CGCCGACCATTGATCTCAAT 58.414 50.000 0.00 0.00 46.62 2.57
3246 3554 1.528586 CGCCGACCATTGATCTCAATC 59.471 52.381 2.45 0.00 44.10 2.67
3247 3555 2.564771 GCCGACCATTGATCTCAATCA 58.435 47.619 2.45 0.00 44.10 2.57
3248 3556 2.289002 GCCGACCATTGATCTCAATCAC 59.711 50.000 2.45 0.00 44.10 3.06
3249 3557 3.534554 CCGACCATTGATCTCAATCACA 58.465 45.455 2.45 0.00 44.10 3.58
3250 3558 3.940852 CCGACCATTGATCTCAATCACAA 59.059 43.478 2.45 0.00 44.10 3.33
3251 3559 4.395854 CCGACCATTGATCTCAATCACAAA 59.604 41.667 2.45 0.00 44.10 2.83
3252 3560 5.327091 CGACCATTGATCTCAATCACAAAC 58.673 41.667 2.45 0.00 44.10 2.93
3253 3561 5.644644 GACCATTGATCTCAATCACAAACC 58.355 41.667 2.45 0.00 44.10 3.27
3254 3562 5.078949 ACCATTGATCTCAATCACAAACCA 58.921 37.500 2.45 0.00 44.10 3.67
3255 3563 5.718130 ACCATTGATCTCAATCACAAACCAT 59.282 36.000 2.45 0.00 44.10 3.55
3256 3564 6.891361 ACCATTGATCTCAATCACAAACCATA 59.109 34.615 2.45 0.00 44.10 2.74
3257 3565 7.562454 ACCATTGATCTCAATCACAAACCATAT 59.438 33.333 2.45 0.00 44.10 1.78
3258 3566 8.080417 CCATTGATCTCAATCACAAACCATATC 58.920 37.037 2.45 0.00 44.10 1.63
3259 3567 8.847196 CATTGATCTCAATCACAAACCATATCT 58.153 33.333 2.45 0.00 44.10 1.98
3260 3568 7.797038 TGATCTCAATCACAAACCATATCTG 57.203 36.000 0.00 0.00 36.98 2.90
3261 3569 7.341030 TGATCTCAATCACAAACCATATCTGT 58.659 34.615 0.00 0.00 36.98 3.41
3262 3570 6.990341 TCTCAATCACAAACCATATCTGTG 57.010 37.500 0.00 0.00 41.47 3.66
3269 3577 7.609760 TCACAAACCATATCTGTGACATTAC 57.390 36.000 0.16 0.00 43.36 1.89
3270 3578 7.164803 TCACAAACCATATCTGTGACATTACA 58.835 34.615 0.16 0.00 43.36 2.41
3271 3579 7.828717 TCACAAACCATATCTGTGACATTACAT 59.171 33.333 0.16 0.00 43.36 2.29
3272 3580 8.461222 CACAAACCATATCTGTGACATTACATT 58.539 33.333 0.00 0.00 42.48 2.71
3273 3581 8.677300 ACAAACCATATCTGTGACATTACATTC 58.323 33.333 0.00 0.00 0.00 2.67
3274 3582 7.807977 AACCATATCTGTGACATTACATTCC 57.192 36.000 0.00 0.00 0.00 3.01
3275 3583 6.299141 ACCATATCTGTGACATTACATTCCC 58.701 40.000 0.00 0.00 0.00 3.97
3276 3584 6.126507 ACCATATCTGTGACATTACATTCCCA 60.127 38.462 0.00 0.00 0.00 4.37
3277 3585 6.944290 CCATATCTGTGACATTACATTCCCAT 59.056 38.462 0.00 0.00 0.00 4.00
3278 3586 7.120285 CCATATCTGTGACATTACATTCCCATC 59.880 40.741 0.00 0.00 0.00 3.51
3279 3587 5.434182 TCTGTGACATTACATTCCCATCA 57.566 39.130 0.00 0.00 0.00 3.07
3280 3588 5.430886 TCTGTGACATTACATTCCCATCAG 58.569 41.667 0.00 0.00 0.00 2.90
3281 3589 5.045651 TCTGTGACATTACATTCCCATCAGT 60.046 40.000 0.00 0.00 0.00 3.41
3282 3590 6.156083 TCTGTGACATTACATTCCCATCAGTA 59.844 38.462 0.00 0.00 0.00 2.74
3283 3591 6.716284 TGTGACATTACATTCCCATCAGTAA 58.284 36.000 0.00 0.00 0.00 2.24
3284 3592 7.345691 TGTGACATTACATTCCCATCAGTAAT 58.654 34.615 0.00 0.00 37.58 1.89
3285 3593 7.833682 TGTGACATTACATTCCCATCAGTAATT 59.166 33.333 0.00 0.00 35.60 1.40
3286 3594 8.686334 GTGACATTACATTCCCATCAGTAATTT 58.314 33.333 0.00 0.00 35.60 1.82
3287 3595 8.902806 TGACATTACATTCCCATCAGTAATTTC 58.097 33.333 0.00 0.00 35.60 2.17
3288 3596 9.125026 GACATTACATTCCCATCAGTAATTTCT 57.875 33.333 0.00 0.00 35.60 2.52
3289 3597 8.906867 ACATTACATTCCCATCAGTAATTTCTG 58.093 33.333 5.76 5.76 35.60 3.02
3290 3598 9.123902 CATTACATTCCCATCAGTAATTTCTGA 57.876 33.333 16.01 16.01 46.39 3.27
3291 3599 9.699410 ATTACATTCCCATCAGTAATTTCTGAA 57.301 29.630 17.36 2.84 45.65 3.02
3303 3611 9.671279 TCAGTAATTTCTGAATGATAAGCTTGA 57.329 29.630 11.91 0.00 40.82 3.02
3322 3630 3.876198 CTGCGCGGTTATGTGCCC 61.876 66.667 8.83 0.00 44.60 5.36
3355 3663 9.574577 TGTATTTCCTGGGAATATGTATATCCT 57.425 33.333 10.59 0.00 33.79 3.24
3359 3667 7.496346 TCCTGGGAATATGTATATCCTGAAC 57.504 40.000 0.00 0.00 0.00 3.18
3363 3671 7.689299 TGGGAATATGTATATCCTGAACTTGG 58.311 38.462 0.00 0.00 0.00 3.61
3364 3672 7.112779 GGGAATATGTATATCCTGAACTTGGG 58.887 42.308 0.00 0.00 0.00 4.12
3366 3674 3.469008 TGTATATCCTGAACTTGGGCG 57.531 47.619 0.00 0.00 0.00 6.13
3370 3678 1.244019 ATCCTGAACTTGGGCGTTGC 61.244 55.000 0.00 0.00 0.00 4.17
3375 3683 0.317854 GAACTTGGGCGTTGCTTGTC 60.318 55.000 0.00 0.00 0.00 3.18
3377 3685 1.283793 CTTGGGCGTTGCTTGTCAG 59.716 57.895 0.00 0.00 0.00 3.51
3378 3686 2.133742 CTTGGGCGTTGCTTGTCAGG 62.134 60.000 0.00 0.00 0.00 3.86
3381 3689 2.980233 GCGTTGCTTGTCAGGGCT 60.980 61.111 0.00 0.00 0.00 5.19
3382 3690 2.949106 CGTTGCTTGTCAGGGCTG 59.051 61.111 0.00 0.00 0.00 4.85
3383 3691 1.893808 CGTTGCTTGTCAGGGCTGT 60.894 57.895 0.00 0.00 0.00 4.40
3384 3692 1.845809 CGTTGCTTGTCAGGGCTGTC 61.846 60.000 0.00 0.00 0.00 3.51
3385 3693 0.819259 GTTGCTTGTCAGGGCTGTCA 60.819 55.000 0.00 0.00 0.00 3.58
3386 3694 0.111061 TTGCTTGTCAGGGCTGTCAT 59.889 50.000 0.00 0.00 0.00 3.06
3387 3695 0.111061 TGCTTGTCAGGGCTGTCATT 59.889 50.000 0.00 0.00 0.00 2.57
3388 3696 0.524862 GCTTGTCAGGGCTGTCATTG 59.475 55.000 0.00 0.00 0.00 2.82
3389 3697 1.901591 CTTGTCAGGGCTGTCATTGT 58.098 50.000 0.00 0.00 0.00 2.71
3390 3698 2.875672 GCTTGTCAGGGCTGTCATTGTA 60.876 50.000 0.00 0.00 0.00 2.41
3391 3699 3.614092 CTTGTCAGGGCTGTCATTGTAT 58.386 45.455 0.00 0.00 0.00 2.29
3392 3700 3.719268 TGTCAGGGCTGTCATTGTATT 57.281 42.857 0.00 0.00 0.00 1.89
3393 3701 4.032960 TGTCAGGGCTGTCATTGTATTT 57.967 40.909 0.00 0.00 0.00 1.40
3394 3702 4.009675 TGTCAGGGCTGTCATTGTATTTC 58.990 43.478 0.00 0.00 0.00 2.17
3395 3703 3.378427 GTCAGGGCTGTCATTGTATTTCC 59.622 47.826 0.00 0.00 0.00 3.13
3396 3704 3.266772 TCAGGGCTGTCATTGTATTTCCT 59.733 43.478 0.00 0.00 0.00 3.36
3397 3705 3.379372 CAGGGCTGTCATTGTATTTCCTG 59.621 47.826 0.00 0.00 34.22 3.86
3398 3706 2.689983 GGGCTGTCATTGTATTTCCTGG 59.310 50.000 0.00 0.00 0.00 4.45
3399 3707 2.689983 GGCTGTCATTGTATTTCCTGGG 59.310 50.000 0.00 0.00 0.00 4.45
3400 3708 2.099756 GCTGTCATTGTATTTCCTGGGC 59.900 50.000 0.00 0.00 0.00 5.36
3401 3709 3.355378 CTGTCATTGTATTTCCTGGGCA 58.645 45.455 0.00 0.00 0.00 5.36
3402 3710 3.956199 CTGTCATTGTATTTCCTGGGCAT 59.044 43.478 0.00 0.00 0.00 4.40
3403 3711 5.122707 TGTCATTGTATTTCCTGGGCATA 57.877 39.130 0.00 0.00 0.00 3.14
3404 3712 5.704354 TGTCATTGTATTTCCTGGGCATAT 58.296 37.500 0.00 0.00 0.00 1.78
3405 3713 5.535783 TGTCATTGTATTTCCTGGGCATATG 59.464 40.000 0.00 0.00 0.00 1.78
3406 3714 5.536161 GTCATTGTATTTCCTGGGCATATGT 59.464 40.000 4.29 0.00 0.00 2.29
3407 3715 6.714810 GTCATTGTATTTCCTGGGCATATGTA 59.285 38.462 4.29 0.00 0.00 2.29
3408 3716 7.394359 GTCATTGTATTTCCTGGGCATATGTAT 59.606 37.037 4.29 0.00 0.00 2.29
3409 3717 8.610369 TCATTGTATTTCCTGGGCATATGTATA 58.390 33.333 4.29 0.00 0.00 1.47
3410 3718 9.241919 CATTGTATTTCCTGGGCATATGTATAA 57.758 33.333 4.29 0.00 0.00 0.98
3411 3719 8.862325 TTGTATTTCCTGGGCATATGTATAAG 57.138 34.615 4.29 0.00 0.00 1.73
3412 3720 6.884295 TGTATTTCCTGGGCATATGTATAAGC 59.116 38.462 4.29 0.00 0.00 3.09
3413 3721 4.301072 TTCCTGGGCATATGTATAAGCC 57.699 45.455 9.12 9.12 44.20 4.35
3414 3722 2.236146 TCCTGGGCATATGTATAAGCCG 59.764 50.000 10.87 0.72 45.46 5.52
3415 3723 2.009774 CTGGGCATATGTATAAGCCGC 58.990 52.381 10.87 6.07 45.46 6.53
3416 3724 1.628340 TGGGCATATGTATAAGCCGCT 59.372 47.619 10.87 0.00 45.46 5.52
3417 3725 2.835156 TGGGCATATGTATAAGCCGCTA 59.165 45.455 10.87 0.12 45.46 4.26
3418 3726 3.195661 GGGCATATGTATAAGCCGCTAC 58.804 50.000 10.87 0.00 45.46 3.58
3419 3727 3.118738 GGGCATATGTATAAGCCGCTACT 60.119 47.826 10.87 0.00 45.46 2.57
3420 3728 3.865745 GGCATATGTATAAGCCGCTACTG 59.134 47.826 4.29 0.00 37.38 2.74
3428 3736 5.710567 TGTATAAGCCGCTACTGTAGATGAT 59.289 40.000 18.64 4.18 0.00 2.45
3441 3749 5.163152 ACTGTAGATGATTCCTGATTTCCCC 60.163 44.000 0.00 0.00 0.00 4.81
3445 3753 4.417854 AGATGATTCCTGATTTCCCCATGA 59.582 41.667 0.00 0.00 0.00 3.07
3446 3756 3.902218 TGATTCCTGATTTCCCCATGAC 58.098 45.455 0.00 0.00 0.00 3.06
3481 3791 1.539388 AGATCTCTAGATGAAGCGGCG 59.461 52.381 0.51 0.51 34.37 6.46
3489 3799 2.025359 GATGAAGCGGCGTGTGCTAC 62.025 60.000 9.37 0.00 43.14 3.58
3494 3804 2.100631 GCGGCGTGTGCTACAATCT 61.101 57.895 9.37 0.00 42.25 2.40
3499 3809 2.030946 GGCGTGTGCTACAATCTGATTC 59.969 50.000 0.00 0.00 42.25 2.52
3503 3813 5.582550 CGTGTGCTACAATCTGATTCTCTA 58.417 41.667 0.00 0.00 0.00 2.43
3504 3814 5.457148 CGTGTGCTACAATCTGATTCTCTAC 59.543 44.000 0.00 0.00 0.00 2.59
3505 3815 6.568869 GTGTGCTACAATCTGATTCTCTACT 58.431 40.000 0.00 0.00 0.00 2.57
3548 3858 2.884639 GTGATTGTTGTGGCTACTTGGT 59.115 45.455 0.64 0.00 0.00 3.67
3556 3866 4.303257 GCTACTTGGTCAGCCACC 57.697 61.111 0.00 0.00 46.01 4.61
3574 3884 0.815734 CCTGAAGAGGCCAATGCTTG 59.184 55.000 5.01 0.00 37.74 4.01
3576 3886 1.201647 CTGAAGAGGCCAATGCTTGTG 59.798 52.381 5.01 0.00 37.74 3.33
3586 3896 1.610038 CAATGCTTGTGCTTGGAGTGA 59.390 47.619 0.00 0.00 40.48 3.41
3591 3901 2.031333 GCTTGTGCTTGGAGTGAAGAAG 60.031 50.000 0.00 0.00 36.03 2.85
3610 3920 1.953559 GTGACTTGCACACCTTCTGA 58.046 50.000 0.00 0.00 46.91 3.27
3615 3925 0.251297 TTGCACACCTTCTGATGGGG 60.251 55.000 10.10 10.10 0.00 4.96
3637 3947 1.672881 GCTAATGTTACCCTGCTGCTG 59.327 52.381 0.00 0.00 0.00 4.41
3654 3964 3.216800 TGCTGTTCTTCTTGCACTTGAT 58.783 40.909 0.00 0.00 0.00 2.57
3662 3972 7.877612 TGTTCTTCTTGCACTTGATTGTAGATA 59.122 33.333 0.00 0.00 0.00 1.98
3737 4047 3.728864 GCAACCTGATCTTGTAATGTGCG 60.729 47.826 0.00 0.00 0.00 5.34
3742 4052 4.437390 CCTGATCTTGTAATGTGCGGTTTC 60.437 45.833 0.00 0.00 0.00 2.78
3743 4053 3.438781 TGATCTTGTAATGTGCGGTTTCC 59.561 43.478 0.00 0.00 0.00 3.13
3744 4054 2.156098 TCTTGTAATGTGCGGTTTCCC 58.844 47.619 0.00 0.00 0.00 3.97
3746 4056 3.008157 TCTTGTAATGTGCGGTTTCCCTA 59.992 43.478 0.00 0.00 0.00 3.53
3750 4060 2.038387 ATGTGCGGTTTCCCTATGTC 57.962 50.000 0.00 0.00 0.00 3.06
3753 4063 2.007608 GTGCGGTTTCCCTATGTCTTC 58.992 52.381 0.00 0.00 0.00 2.87
3754 4064 1.906574 TGCGGTTTCCCTATGTCTTCT 59.093 47.619 0.00 0.00 0.00 2.85
3756 4066 2.168728 GCGGTTTCCCTATGTCTTCTCT 59.831 50.000 0.00 0.00 0.00 3.10
3757 4067 3.738590 GCGGTTTCCCTATGTCTTCTCTC 60.739 52.174 0.00 0.00 0.00 3.20
3759 4069 4.100189 CGGTTTCCCTATGTCTTCTCTCAT 59.900 45.833 0.00 0.00 0.00 2.90
3760 4070 5.363939 GGTTTCCCTATGTCTTCTCTCATG 58.636 45.833 0.00 0.00 0.00 3.07
3764 4074 5.766590 TCCCTATGTCTTCTCTCATGTGTA 58.233 41.667 0.00 0.00 0.00 2.90
3765 4075 5.830457 TCCCTATGTCTTCTCTCATGTGTAG 59.170 44.000 0.00 0.00 0.00 2.74
3766 4076 5.596361 CCCTATGTCTTCTCTCATGTGTAGT 59.404 44.000 0.00 0.00 0.00 2.73
3767 4077 6.097554 CCCTATGTCTTCTCTCATGTGTAGTT 59.902 42.308 0.00 0.00 0.00 2.24
3768 4078 7.364232 CCCTATGTCTTCTCTCATGTGTAGTTT 60.364 40.741 0.00 0.00 0.00 2.66
3769 4079 8.037758 CCTATGTCTTCTCTCATGTGTAGTTTT 58.962 37.037 0.00 0.00 0.00 2.43
3770 4080 7.664082 ATGTCTTCTCTCATGTGTAGTTTTG 57.336 36.000 0.00 0.00 0.00 2.44
3771 4081 5.991606 TGTCTTCTCTCATGTGTAGTTTTGG 59.008 40.000 0.00 0.00 0.00 3.28
3772 4082 4.997395 TCTTCTCTCATGTGTAGTTTTGGC 59.003 41.667 0.00 0.00 0.00 4.52
3773 4083 4.350368 TCTCTCATGTGTAGTTTTGGCA 57.650 40.909 0.00 0.00 0.00 4.92
3774 4084 4.713553 TCTCTCATGTGTAGTTTTGGCAA 58.286 39.130 0.00 0.00 0.00 4.52
3775 4085 5.316167 TCTCTCATGTGTAGTTTTGGCAAT 58.684 37.500 0.00 0.00 0.00 3.56
3776 4086 5.769662 TCTCTCATGTGTAGTTTTGGCAATT 59.230 36.000 0.00 0.00 0.00 2.32
3777 4087 5.771469 TCTCATGTGTAGTTTTGGCAATTG 58.229 37.500 0.00 0.00 0.00 2.32
3778 4088 4.880759 TCATGTGTAGTTTTGGCAATTGG 58.119 39.130 7.72 0.00 0.00 3.16
3779 4089 3.742433 TGTGTAGTTTTGGCAATTGGG 57.258 42.857 7.72 0.00 0.00 4.12
3780 4090 3.034635 TGTGTAGTTTTGGCAATTGGGT 58.965 40.909 7.72 0.00 0.00 4.51
3781 4091 3.068873 TGTGTAGTTTTGGCAATTGGGTC 59.931 43.478 7.72 0.00 0.00 4.46
3782 4092 2.630580 TGTAGTTTTGGCAATTGGGTCC 59.369 45.455 7.72 0.33 0.00 4.46
3783 4093 2.101640 AGTTTTGGCAATTGGGTCCT 57.898 45.000 7.72 0.00 0.00 3.85
3784 4094 1.693606 AGTTTTGGCAATTGGGTCCTG 59.306 47.619 7.72 0.00 0.00 3.86
3785 4095 0.396060 TTTTGGCAATTGGGTCCTGC 59.604 50.000 7.72 0.00 35.28 4.85
3786 4096 0.471591 TTTGGCAATTGGGTCCTGCT 60.472 50.000 7.72 0.00 36.32 4.24
3787 4097 1.186917 TTGGCAATTGGGTCCTGCTG 61.187 55.000 7.72 0.00 36.32 4.41
3788 4098 1.607467 GGCAATTGGGTCCTGCTGT 60.607 57.895 7.72 0.00 36.32 4.40
3789 4099 1.588082 GCAATTGGGTCCTGCTGTG 59.412 57.895 7.72 0.00 33.20 3.66
3790 4100 1.181098 GCAATTGGGTCCTGCTGTGT 61.181 55.000 7.72 0.00 33.20 3.72
3791 4101 0.599558 CAATTGGGTCCTGCTGTGTG 59.400 55.000 0.00 0.00 0.00 3.82
3792 4102 0.185901 AATTGGGTCCTGCTGTGTGT 59.814 50.000 0.00 0.00 0.00 3.72
3793 4103 0.538057 ATTGGGTCCTGCTGTGTGTG 60.538 55.000 0.00 0.00 0.00 3.82
3794 4104 1.920734 TTGGGTCCTGCTGTGTGTGT 61.921 55.000 0.00 0.00 0.00 3.72
3795 4105 1.893808 GGGTCCTGCTGTGTGTGTG 60.894 63.158 0.00 0.00 0.00 3.82
3796 4106 2.546494 GGTCCTGCTGTGTGTGTGC 61.546 63.158 0.00 0.00 0.00 4.57
3797 4107 2.588596 TCCTGCTGTGTGTGTGCG 60.589 61.111 0.00 0.00 0.00 5.34
3798 4108 2.896854 CCTGCTGTGTGTGTGCGT 60.897 61.111 0.00 0.00 0.00 5.24
3799 4109 2.472059 CCTGCTGTGTGTGTGCGTT 61.472 57.895 0.00 0.00 0.00 4.84
3800 4110 1.429021 CTGCTGTGTGTGTGCGTTT 59.571 52.632 0.00 0.00 0.00 3.60
3801 4111 0.862701 CTGCTGTGTGTGTGCGTTTG 60.863 55.000 0.00 0.00 0.00 2.93
3844 4161 1.541588 GATGTGTTTGGTTCTGCTCCC 59.458 52.381 0.00 0.00 0.00 4.30
3853 4170 0.393537 GTTCTGCTCCCCATGTGAGG 60.394 60.000 10.49 0.29 0.00 3.86
3877 4285 7.014326 AGGGTTTTCTTTGTTCCTGAAGATAAC 59.986 37.037 9.45 9.45 40.23 1.89
3895 4303 8.594881 AAGATAACATATTGGAAAGCTACTCG 57.405 34.615 0.00 0.00 0.00 4.18
3896 4304 7.155328 AGATAACATATTGGAAAGCTACTCGG 58.845 38.462 0.00 0.00 0.00 4.63
3920 4343 2.158769 TGCAGGGCTGTTATCATGGTAG 60.159 50.000 0.00 0.00 0.00 3.18
3930 4353 4.655649 TGTTATCATGGTAGACTGCCATCT 59.344 41.667 21.03 14.01 44.25 2.90
3941 4364 0.326264 CTGCCATCTACCATAGCCCC 59.674 60.000 0.00 0.00 0.00 5.80
4004 5985 6.022163 TGGCTACGGAATCTTATAAGCTAC 57.978 41.667 7.67 0.00 0.00 3.58
4005 5986 5.773680 TGGCTACGGAATCTTATAAGCTACT 59.226 40.000 7.67 0.00 0.00 2.57
4006 5987 6.944290 TGGCTACGGAATCTTATAAGCTACTA 59.056 38.462 7.67 0.00 0.00 1.82
4007 5988 7.094463 TGGCTACGGAATCTTATAAGCTACTAC 60.094 40.741 7.67 0.00 0.00 2.73
4008 5989 7.121020 GGCTACGGAATCTTATAAGCTACTACT 59.879 40.741 7.67 0.00 0.00 2.57
4009 5990 7.964011 GCTACGGAATCTTATAAGCTACTACTG 59.036 40.741 7.67 4.11 0.00 2.74
4010 5991 7.820578 ACGGAATCTTATAAGCTACTACTGT 57.179 36.000 7.67 4.64 0.00 3.55
4011 5992 8.915057 ACGGAATCTTATAAGCTACTACTGTA 57.085 34.615 7.67 0.00 0.00 2.74
4012 5993 9.517868 ACGGAATCTTATAAGCTACTACTGTAT 57.482 33.333 7.67 0.00 0.00 2.29
4042 6179 3.983344 GGCAAAGTGTTTATGCTTCAGTG 59.017 43.478 0.00 0.00 39.94 3.66
4071 6208 0.756903 ACTGAACCGGCTGTAGTTGT 59.243 50.000 0.00 0.00 0.00 3.32
4120 6259 4.037923 TGAATTTCAGGAGCACCTTTGTTC 59.962 41.667 0.00 3.97 45.36 3.18
4134 6273 3.428862 CCTTTGTTCACAGCTTCGGTTTT 60.429 43.478 0.00 0.00 0.00 2.43
4193 6333 9.314321 GTATTGGTATGTATATGGATGCTACAC 57.686 37.037 0.00 0.00 0.00 2.90
4205 6345 1.292223 GCTACACGGTTCCAGCAGA 59.708 57.895 0.00 0.00 34.13 4.26
4236 6376 2.438795 GGAGCGTCCTCTCCGACT 60.439 66.667 0.00 0.00 42.74 4.18
4241 6381 1.159098 GCGTCCTCTCCGACTCGTAT 61.159 60.000 0.00 0.00 0.00 3.06
4262 6402 6.183360 CGTATGGCTACATCTGGAAACAAATT 60.183 38.462 0.00 0.00 38.08 1.82
4295 6435 1.490490 AGGCACAAAACAGGAGAGACA 59.510 47.619 0.00 0.00 0.00 3.41
4297 6437 2.288666 GCACAAAACAGGAGAGACACA 58.711 47.619 0.00 0.00 0.00 3.72
4303 6443 0.972883 ACAGGAGAGACACAGCCTTC 59.027 55.000 0.00 0.00 0.00 3.46
4402 6543 5.518487 TCGTTGCTGAATTTTCCTTTTTGAC 59.482 36.000 0.00 0.00 0.00 3.18
4514 6658 7.201635 CGTTGATAAACACATGGATTGATCTGA 60.202 37.037 0.00 0.00 0.00 3.27
4520 6664 5.657474 ACACATGGATTGATCTGAAAATGC 58.343 37.500 0.00 2.37 0.00 3.56
4524 6668 5.063180 TGGATTGATCTGAAAATGCACAC 57.937 39.130 0.00 0.00 30.33 3.82
4547 6691 9.744468 ACACTTTAAACTGAACATTGTTTATCC 57.256 29.630 3.08 0.00 38.10 2.59
4595 6739 9.614792 ATTTCGCTTCCTGATTTAATTAGTAGT 57.385 29.630 0.00 0.00 0.00 2.73
4629 6773 2.324541 TCCCCCAAAGGAACATTTGTG 58.675 47.619 10.22 0.41 38.28 3.33
4630 6774 2.046292 CCCCCAAAGGAACATTTGTGT 58.954 47.619 10.22 0.00 38.28 3.72
4664 6808 1.136147 GACAAGCCGAGCAATGCAG 59.864 57.895 8.35 0.26 0.00 4.41
4667 6811 1.748122 AAGCCGAGCAATGCAGAGG 60.748 57.895 8.35 8.62 0.00 3.69
4668 6812 2.437359 GCCGAGCAATGCAGAGGT 60.437 61.111 8.35 0.00 0.00 3.85
4670 6814 1.986575 GCCGAGCAATGCAGAGGTTC 61.987 60.000 8.35 0.00 0.00 3.62
4671 6815 0.674581 CCGAGCAATGCAGAGGTTCA 60.675 55.000 8.35 0.00 0.00 3.18
4672 6816 1.159285 CGAGCAATGCAGAGGTTCAA 58.841 50.000 8.35 0.00 0.00 2.69
4681 6827 2.087646 GCAGAGGTTCAATTGGAGGAC 58.912 52.381 5.42 0.10 0.00 3.85
4722 6868 6.746745 ACTGAAGAAAAGTTGGTTCGTTTA 57.253 33.333 0.00 0.00 0.00 2.01
4736 6882 3.965379 TCGTTTACCATAACCTGAGCA 57.035 42.857 0.00 0.00 0.00 4.26
4742 6888 1.279271 ACCATAACCTGAGCAGTGGTC 59.721 52.381 15.47 15.47 35.12 4.02
4781 6927 1.187567 AATTTGGGGTGTGAGCTGGC 61.188 55.000 0.00 0.00 0.00 4.85
4815 6961 3.316071 TGCCAGTTTGCCACAATTATG 57.684 42.857 0.00 0.00 0.00 1.90
4818 6964 4.173256 GCCAGTTTGCCACAATTATGTAC 58.827 43.478 0.00 0.00 37.82 2.90
4819 6965 4.411327 CCAGTTTGCCACAATTATGTACG 58.589 43.478 0.00 0.00 37.82 3.67
4820 6966 4.083003 CCAGTTTGCCACAATTATGTACGT 60.083 41.667 0.00 0.00 37.82 3.57
4821 6967 5.122554 CCAGTTTGCCACAATTATGTACGTA 59.877 40.000 0.00 0.00 37.82 3.57
4824 6970 8.556194 CAGTTTGCCACAATTATGTACGTATAT 58.444 33.333 9.87 9.87 37.82 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.027437 TGGTAAATATTGGGAGTTTGGGC 58.973 43.478 0.00 0.00 0.00 5.36
1 2 5.515106 TCTGGTAAATATTGGGAGTTTGGG 58.485 41.667 0.00 0.00 0.00 4.12
4 5 6.839134 GGGATTCTGGTAAATATTGGGAGTTT 59.161 38.462 0.00 0.00 0.00 2.66
5 6 6.373759 GGGATTCTGGTAAATATTGGGAGTT 58.626 40.000 0.00 0.00 0.00 3.01
6 7 5.456186 CGGGATTCTGGTAAATATTGGGAGT 60.456 44.000 0.00 0.00 0.00 3.85
7 8 5.003804 CGGGATTCTGGTAAATATTGGGAG 58.996 45.833 0.00 0.00 0.00 4.30
8 9 4.748548 GCGGGATTCTGGTAAATATTGGGA 60.749 45.833 0.00 0.00 0.00 4.37
9 10 3.506067 GCGGGATTCTGGTAAATATTGGG 59.494 47.826 0.00 0.00 0.00 4.12
10 11 4.398319 AGCGGGATTCTGGTAAATATTGG 58.602 43.478 0.00 0.00 0.00 3.16
11 12 6.208644 CAAAGCGGGATTCTGGTAAATATTG 58.791 40.000 0.00 0.00 0.00 1.90
12 13 5.221244 GCAAAGCGGGATTCTGGTAAATATT 60.221 40.000 0.00 0.00 0.00 1.28
13 14 4.278419 GCAAAGCGGGATTCTGGTAAATAT 59.722 41.667 0.00 0.00 0.00 1.28
14 15 3.630312 GCAAAGCGGGATTCTGGTAAATA 59.370 43.478 0.00 0.00 0.00 1.40
15 16 2.427095 GCAAAGCGGGATTCTGGTAAAT 59.573 45.455 0.00 0.00 0.00 1.40
16 17 1.816224 GCAAAGCGGGATTCTGGTAAA 59.184 47.619 0.00 0.00 0.00 2.01
17 18 1.004277 AGCAAAGCGGGATTCTGGTAA 59.996 47.619 0.00 0.00 0.00 2.85
18 19 0.618458 AGCAAAGCGGGATTCTGGTA 59.382 50.000 0.00 0.00 0.00 3.25
19 20 0.678048 GAGCAAAGCGGGATTCTGGT 60.678 55.000 0.00 0.00 0.00 4.00
20 21 0.677731 TGAGCAAAGCGGGATTCTGG 60.678 55.000 0.00 0.00 0.00 3.86
21 22 0.449388 GTGAGCAAAGCGGGATTCTG 59.551 55.000 0.00 0.00 0.00 3.02
22 23 0.678048 GGTGAGCAAAGCGGGATTCT 60.678 55.000 0.00 0.00 0.00 2.40
23 24 0.960364 TGGTGAGCAAAGCGGGATTC 60.960 55.000 0.00 0.00 0.00 2.52
24 25 0.962356 CTGGTGAGCAAAGCGGGATT 60.962 55.000 0.00 0.00 0.00 3.01
25 26 1.377725 CTGGTGAGCAAAGCGGGAT 60.378 57.895 0.00 0.00 0.00 3.85
26 27 2.032528 CTGGTGAGCAAAGCGGGA 59.967 61.111 0.00 0.00 0.00 5.14
27 28 0.962356 ATTCTGGTGAGCAAAGCGGG 60.962 55.000 0.00 0.00 0.00 6.13
28 29 0.883833 AATTCTGGTGAGCAAAGCGG 59.116 50.000 0.00 0.00 0.00 5.52
29 30 1.464687 CGAATTCTGGTGAGCAAAGCG 60.465 52.381 3.52 0.00 0.00 4.68
30 31 1.730446 GCGAATTCTGGTGAGCAAAGC 60.730 52.381 3.52 0.00 0.00 3.51
31 32 1.536766 TGCGAATTCTGGTGAGCAAAG 59.463 47.619 3.52 0.00 0.00 2.77
32 33 1.536766 CTGCGAATTCTGGTGAGCAAA 59.463 47.619 3.52 0.00 34.04 3.68
33 34 1.159285 CTGCGAATTCTGGTGAGCAA 58.841 50.000 3.52 0.00 34.04 3.91
34 35 0.035317 ACTGCGAATTCTGGTGAGCA 59.965 50.000 3.52 3.72 0.00 4.26
35 36 0.445436 CACTGCGAATTCTGGTGAGC 59.555 55.000 13.40 5.45 0.00 4.26
36 37 0.445436 GCACTGCGAATTCTGGTGAG 59.555 55.000 19.27 5.82 0.00 3.51
37 38 0.955428 GGCACTGCGAATTCTGGTGA 60.955 55.000 19.27 0.00 0.00 4.02
38 39 1.503542 GGCACTGCGAATTCTGGTG 59.496 57.895 3.52 10.17 0.00 4.17
39 40 1.675641 GGGCACTGCGAATTCTGGT 60.676 57.895 3.52 0.00 0.00 4.00
40 41 2.753966 CGGGCACTGCGAATTCTGG 61.754 63.158 3.52 0.00 0.00 3.86
41 42 0.739462 TACGGGCACTGCGAATTCTG 60.739 55.000 3.52 0.00 39.14 3.02
42 43 0.178068 ATACGGGCACTGCGAATTCT 59.822 50.000 3.52 0.00 39.14 2.40
43 44 1.014352 AATACGGGCACTGCGAATTC 58.986 50.000 0.00 0.00 39.14 2.17
44 45 2.319136 TAATACGGGCACTGCGAATT 57.681 45.000 0.00 0.00 39.14 2.17
45 46 2.224185 TGATAATACGGGCACTGCGAAT 60.224 45.455 0.00 0.00 39.14 3.34
46 47 1.137282 TGATAATACGGGCACTGCGAA 59.863 47.619 0.00 0.00 39.14 4.70
47 48 0.747852 TGATAATACGGGCACTGCGA 59.252 50.000 0.00 0.00 39.14 5.10
48 49 1.795768 ATGATAATACGGGCACTGCG 58.204 50.000 0.00 0.00 39.14 5.18
49 50 2.484264 GGAATGATAATACGGGCACTGC 59.516 50.000 0.00 0.00 39.14 4.40
50 51 4.008074 AGGAATGATAATACGGGCACTG 57.992 45.455 0.00 0.00 42.99 3.66
51 52 4.706842 AAGGAATGATAATACGGGCACT 57.293 40.909 0.00 0.00 0.00 4.40
52 53 6.147328 GTCTAAAGGAATGATAATACGGGCAC 59.853 42.308 0.00 0.00 0.00 5.01
53 54 6.183361 TGTCTAAAGGAATGATAATACGGGCA 60.183 38.462 0.00 0.00 0.00 5.36
54 55 6.228258 TGTCTAAAGGAATGATAATACGGGC 58.772 40.000 0.00 0.00 0.00 6.13
55 56 9.587772 CTATGTCTAAAGGAATGATAATACGGG 57.412 37.037 0.00 0.00 0.00 5.28
56 57 9.088512 GCTATGTCTAAAGGAATGATAATACGG 57.911 37.037 0.00 0.00 0.00 4.02
57 58 9.088512 GGCTATGTCTAAAGGAATGATAATACG 57.911 37.037 0.00 0.00 0.00 3.06
58 59 9.384764 GGGCTATGTCTAAAGGAATGATAATAC 57.615 37.037 0.00 0.00 0.00 1.89
59 60 9.111519 TGGGCTATGTCTAAAGGAATGATAATA 57.888 33.333 0.00 0.00 0.00 0.98
60 61 7.988937 TGGGCTATGTCTAAAGGAATGATAAT 58.011 34.615 0.00 0.00 0.00 1.28
61 62 7.387265 TGGGCTATGTCTAAAGGAATGATAA 57.613 36.000 0.00 0.00 0.00 1.75
62 63 7.387265 TTGGGCTATGTCTAAAGGAATGATA 57.613 36.000 0.00 0.00 0.00 2.15
63 64 5.912149 TGGGCTATGTCTAAAGGAATGAT 57.088 39.130 0.00 0.00 0.00 2.45
64 65 5.708736 TTGGGCTATGTCTAAAGGAATGA 57.291 39.130 0.00 0.00 0.00 2.57
65 66 5.888161 AGTTTGGGCTATGTCTAAAGGAATG 59.112 40.000 0.00 0.00 0.00 2.67
66 67 6.079712 AGTTTGGGCTATGTCTAAAGGAAT 57.920 37.500 0.00 0.00 0.00 3.01
67 68 5.497474 GAGTTTGGGCTATGTCTAAAGGAA 58.503 41.667 0.00 0.00 0.00 3.36
68 69 4.080526 GGAGTTTGGGCTATGTCTAAAGGA 60.081 45.833 0.00 0.00 0.00 3.36
69 70 4.200092 GGAGTTTGGGCTATGTCTAAAGG 58.800 47.826 0.00 0.00 0.00 3.11
70 71 4.200092 GGGAGTTTGGGCTATGTCTAAAG 58.800 47.826 0.00 0.00 0.00 1.85
71 72 3.589735 TGGGAGTTTGGGCTATGTCTAAA 59.410 43.478 0.00 0.00 0.00 1.85
72 73 3.186283 TGGGAGTTTGGGCTATGTCTAA 58.814 45.455 0.00 0.00 0.00 2.10
73 74 2.840511 TGGGAGTTTGGGCTATGTCTA 58.159 47.619 0.00 0.00 0.00 2.59
81 82 3.513515 TGTCAAATATTGGGAGTTTGGGC 59.486 43.478 0.00 0.00 34.48 5.36
110 111 2.653726 TGGATTCACACATGGTATGGC 58.346 47.619 0.00 0.00 33.60 4.40
148 149 4.019174 AGGGCTGTGGATTTGAATACAAG 58.981 43.478 0.00 0.00 37.32 3.16
149 150 4.046286 AGGGCTGTGGATTTGAATACAA 57.954 40.909 0.00 0.00 29.32 2.41
151 152 4.781934 AGTAGGGCTGTGGATTTGAATAC 58.218 43.478 0.00 0.00 0.00 1.89
153 154 5.653255 ATAGTAGGGCTGTGGATTTGAAT 57.347 39.130 0.00 0.00 0.00 2.57
157 158 5.428783 ACAACTATAGTAGGGCTGTGGATTT 59.571 40.000 5.65 0.00 0.00 2.17
163 164 3.306613 GGGACAACTATAGTAGGGCTGT 58.693 50.000 5.65 6.34 0.00 4.40
166 167 1.000618 GCGGGACAACTATAGTAGGGC 59.999 57.143 5.65 3.76 0.00 5.19
169 170 3.635373 TGGAAGCGGGACAACTATAGTAG 59.365 47.826 5.65 0.00 0.00 2.57
170 171 3.634504 TGGAAGCGGGACAACTATAGTA 58.365 45.455 5.65 0.00 0.00 1.82
171 172 2.463752 TGGAAGCGGGACAACTATAGT 58.536 47.619 0.00 0.00 0.00 2.12
172 173 3.753294 ATGGAAGCGGGACAACTATAG 57.247 47.619 0.00 0.00 0.00 1.31
177 178 1.594331 GGATATGGAAGCGGGACAAC 58.406 55.000 0.00 0.00 0.00 3.32
225 226 4.458642 GGAGTGGATACGGTAGGATAACTC 59.541 50.000 0.00 3.09 42.51 3.01
227 228 3.190118 CGGAGTGGATACGGTAGGATAAC 59.810 52.174 0.00 0.00 42.51 1.89
243 244 3.293311 TCTTAGAACGAAACCGGAGTG 57.707 47.619 9.46 0.00 0.00 3.51
262 263 6.992063 TCAAAGAGATAAGTGGATTGCTTC 57.008 37.500 0.00 0.00 0.00 3.86
269 270 7.619698 TGTAGAGGATTCAAAGAGATAAGTGGA 59.380 37.037 0.00 0.00 0.00 4.02
403 404 0.181350 CCCTAACCTCACATGCCTCC 59.819 60.000 0.00 0.00 0.00 4.30
444 448 4.875561 AGTACCAGTCCTGTTCTTCTTC 57.124 45.455 0.00 0.00 0.00 2.87
445 449 5.632034 AAAGTACCAGTCCTGTTCTTCTT 57.368 39.130 0.00 0.00 0.00 2.52
446 450 5.367060 AGAAAAGTACCAGTCCTGTTCTTCT 59.633 40.000 0.00 0.00 0.00 2.85
455 459 6.169094 GGGTAGTTAAGAAAAGTACCAGTCC 58.831 44.000 18.68 3.31 44.32 3.85
488 492 1.134670 CCCTAAGTGCTGCTCCTACAC 60.135 57.143 0.00 0.00 34.48 2.90
494 498 2.185004 TTGAACCCTAAGTGCTGCTC 57.815 50.000 0.00 0.00 0.00 4.26
542 546 3.952323 AGCATTCATCCAAGATCCAACAG 59.048 43.478 0.00 0.00 0.00 3.16
543 547 3.949754 GAGCATTCATCCAAGATCCAACA 59.050 43.478 0.00 0.00 0.00 3.33
566 570 2.513204 CTCCACGCAGCCCATCTG 60.513 66.667 0.00 0.00 45.62 2.90
591 595 4.377897 CCCGATATACAAAACAGGTCTCC 58.622 47.826 0.00 0.00 0.00 3.71
610 614 1.600638 GACCCCTTGACTAACCCCG 59.399 63.158 0.00 0.00 0.00 5.73
613 617 1.652947 TGAGGACCCCTTGACTAACC 58.347 55.000 0.00 0.00 31.76 2.85
628 632 2.636830 AGCTCCATTCGTTTCATGAGG 58.363 47.619 0.00 0.00 0.00 3.86
629 633 3.242220 CGAAGCTCCATTCGTTTCATGAG 60.242 47.826 0.00 0.00 45.37 2.90
694 704 4.260194 GCACAAAATGGGCCGTTC 57.740 55.556 12.25 0.00 41.97 3.95
729 739 6.766467 GTCAGGGGGTAGTGATTAAATACTTG 59.234 42.308 0.99 0.00 0.00 3.16
746 756 0.254178 CTGGATGTTCTGTCAGGGGG 59.746 60.000 0.00 0.00 0.00 5.40
771 781 5.656213 TTAGGTTCACTAGCTAGGTTCAC 57.344 43.478 24.35 14.20 38.05 3.18
781 791 7.361286 GCATGGAGTTCTTTTTAGGTTCACTAG 60.361 40.741 0.00 0.00 32.16 2.57
782 792 6.430000 GCATGGAGTTCTTTTTAGGTTCACTA 59.570 38.462 0.00 0.00 0.00 2.74
783 793 5.241728 GCATGGAGTTCTTTTTAGGTTCACT 59.758 40.000 0.00 0.00 0.00 3.41
784 794 5.241728 AGCATGGAGTTCTTTTTAGGTTCAC 59.758 40.000 0.00 0.00 0.00 3.18
785 795 5.385198 AGCATGGAGTTCTTTTTAGGTTCA 58.615 37.500 0.00 0.00 0.00 3.18
786 796 5.106118 GGAGCATGGAGTTCTTTTTAGGTTC 60.106 44.000 0.00 0.00 0.00 3.62
787 797 4.767409 GGAGCATGGAGTTCTTTTTAGGTT 59.233 41.667 0.00 0.00 0.00 3.50
796 806 1.220206 CGCTGGAGCATGGAGTTCT 59.780 57.895 0.00 0.00 42.21 3.01
797 807 0.809241 CTCGCTGGAGCATGGAGTTC 60.809 60.000 0.00 0.00 42.21 3.01
819 829 5.005107 CGACATCATATGTGTTGTCTGACAG 59.995 44.000 23.17 10.00 46.02 3.51
842 852 5.728255 CACTAAAATATTTCGGAGAGCACG 58.272 41.667 0.10 0.00 38.43 5.34
869 879 1.583054 CAGAGGCTGCGTTATAACCC 58.417 55.000 10.01 5.40 0.00 4.11
880 890 1.662044 GCAAAACCACCAGAGGCTG 59.338 57.895 0.00 0.00 0.00 4.85
882 892 1.115326 AAGGCAAAACCACCAGAGGC 61.115 55.000 0.00 0.00 43.14 4.70
888 898 1.270785 CCCATCAAAGGCAAAACCACC 60.271 52.381 0.00 0.00 43.14 4.61
908 918 0.454600 TGGAATACGGCTCTGTCGTC 59.545 55.000 0.00 0.00 40.97 4.20
910 920 1.560923 CTTGGAATACGGCTCTGTCG 58.439 55.000 0.00 0.00 36.42 4.35
963 973 1.334869 GTGTTGAGCTGAACCAACCAG 59.665 52.381 13.73 0.00 41.26 4.00
1008 1021 1.561769 CCCATGTGAGCCCTGGTACA 61.562 60.000 0.00 0.00 0.00 2.90
1009 1022 1.224592 CCCATGTGAGCCCTGGTAC 59.775 63.158 0.00 0.00 0.00 3.34
1010 1023 0.548926 TTCCCATGTGAGCCCTGGTA 60.549 55.000 0.00 0.00 0.00 3.25
1015 1028 1.649271 ATCCCTTCCCATGTGAGCCC 61.649 60.000 0.00 0.00 0.00 5.19
1017 1030 1.105759 GCATCCCTTCCCATGTGAGC 61.106 60.000 0.00 0.00 0.00 4.26
1018 1031 0.549950 AGCATCCCTTCCCATGTGAG 59.450 55.000 0.00 0.00 0.00 3.51
1040 1063 5.627780 GCAAACCAAAGATAAACAACTACGG 59.372 40.000 0.00 0.00 0.00 4.02
1045 1068 6.045955 TCCAAGCAAACCAAAGATAAACAAC 58.954 36.000 0.00 0.00 0.00 3.32
1066 1111 4.503817 GGATCATTCGGACTCATGAATCCA 60.504 45.833 22.29 4.86 33.13 3.41
1067 1112 3.999663 GGATCATTCGGACTCATGAATCC 59.000 47.826 13.33 13.33 33.13 3.01
1073 1118 3.580458 CCTAAGGGATCATTCGGACTCAT 59.420 47.826 0.00 0.00 33.58 2.90
1074 1119 2.965831 CCTAAGGGATCATTCGGACTCA 59.034 50.000 0.00 0.00 33.58 3.41
1075 1120 3.006003 GTCCTAAGGGATCATTCGGACTC 59.994 52.174 18.73 2.71 44.33 3.36
1080 1125 3.258622 GGTAGGTCCTAAGGGATCATTCG 59.741 52.174 0.00 0.00 44.96 3.34
1099 1144 2.591753 GCATGAGGCTGCCAGGTA 59.408 61.111 22.65 3.99 40.25 3.08
1143 1188 3.032459 TGTGTGTGGTACCTCTGTTGTA 58.968 45.455 14.36 0.00 0.00 2.41
1199 1273 2.820787 GAGAAGAACGAGGTCAAGGAGA 59.179 50.000 0.00 0.00 0.00 3.71
1256 1332 2.236146 TGTGGCTGGTGTTGGATACTAG 59.764 50.000 0.00 0.00 37.61 2.57
1257 1333 2.261729 TGTGGCTGGTGTTGGATACTA 58.738 47.619 0.00 0.00 37.61 1.82
1258 1334 1.064003 TGTGGCTGGTGTTGGATACT 58.936 50.000 0.00 0.00 37.61 2.12
1259 1335 1.539827 GTTGTGGCTGGTGTTGGATAC 59.460 52.381 0.00 0.00 0.00 2.24
1276 1352 0.251121 TACACAGGTGCCATGGGTTG 60.251 55.000 15.13 0.63 35.47 3.77
1313 1392 1.148027 CCACCATCTCCCTAGCTAGGA 59.852 57.143 36.80 22.46 46.63 2.94
1314 1393 1.638529 CCACCATCTCCCTAGCTAGG 58.361 60.000 30.05 30.05 43.25 3.02
1518 1597 1.227943 GCCAAGATCCCGCATGCTA 60.228 57.895 17.13 1.00 0.00 3.49
1587 1666 1.689243 CCGCCTCCATCTCCATGTCA 61.689 60.000 0.00 0.00 0.00 3.58
2010 2120 3.307059 CCTGGTCGATTTGAGAAAGGAGT 60.307 47.826 0.00 0.00 0.00 3.85
2327 2622 7.088589 ACAATTATTCTGCTACCATTGTGAC 57.911 36.000 0.00 0.00 34.37 3.67
2365 2660 3.678056 AGTTGACTTCGCTACATTGGA 57.322 42.857 0.00 0.00 0.00 3.53
2502 2797 7.731054 TCCTTAAGATCCTAGCTGAAATCTTC 58.269 38.462 17.42 0.00 38.86 2.87
2689 2984 1.947456 GTGCGGAAGATCCCAATAACC 59.053 52.381 0.00 0.00 31.13 2.85
2733 3028 5.133830 TCCGCCCTCTGGATATATACATAGA 59.866 44.000 11.11 0.13 0.00 1.98
2734 3029 5.386060 TCCGCCCTCTGGATATATACATAG 58.614 45.833 0.00 0.55 0.00 2.23
2813 3108 9.546428 CTTCTTGATACAAATTTCCCTGTTTTT 57.454 29.630 0.00 0.00 0.00 1.94
2983 3284 3.726291 TGCAAAGACCCTTTAAACAGC 57.274 42.857 0.00 0.00 0.00 4.40
3048 3356 1.460255 CCCTTCCTGTTCAAGCCCA 59.540 57.895 0.00 0.00 0.00 5.36
3061 3369 3.542304 GGCATGGATTGGCCCTTC 58.458 61.111 0.00 0.00 44.92 3.46
3067 3375 2.940158 TCTTCTGATGGCATGGATTGG 58.060 47.619 3.81 0.00 0.00 3.16
3101 3409 2.667969 TCGAACACATTCAATGAGCGAG 59.332 45.455 3.79 0.00 34.14 5.03
3135 3443 3.495100 GGGATCCTACAAGTGGCAGTATG 60.495 52.174 12.58 0.00 40.87 2.39
3140 3448 0.911769 CTGGGATCCTACAAGTGGCA 59.088 55.000 12.58 0.00 0.00 4.92
3141 3449 0.464554 GCTGGGATCCTACAAGTGGC 60.465 60.000 12.58 0.00 0.00 5.01
3150 3458 1.000396 GTGCAAAGGCTGGGATCCT 60.000 57.895 12.58 0.00 41.91 3.24
3152 3460 0.458669 CATGTGCAAAGGCTGGGATC 59.541 55.000 0.00 0.00 41.91 3.36
3153 3461 0.251922 ACATGTGCAAAGGCTGGGAT 60.252 50.000 0.00 0.00 41.91 3.85
3155 3463 0.393820 AAACATGTGCAAAGGCTGGG 59.606 50.000 0.00 0.00 41.91 4.45
3160 3468 5.524511 CATGAATCAAACATGTGCAAAGG 57.475 39.130 0.00 0.00 39.84 3.11
3191 3499 4.279671 ACCACTTTGTCACACACAGAAAAA 59.720 37.500 0.00 0.00 35.97 1.94
3196 3504 1.401552 CCACCACTTTGTCACACACAG 59.598 52.381 0.00 0.00 35.97 3.66
3197 3505 1.271652 ACCACCACTTTGTCACACACA 60.272 47.619 0.00 0.00 0.00 3.72
3198 3506 1.132262 CACCACCACTTTGTCACACAC 59.868 52.381 0.00 0.00 0.00 3.82
3201 3509 1.034838 GGCACCACCACTTTGTCACA 61.035 55.000 0.00 0.00 38.86 3.58
3202 3510 0.751643 AGGCACCACCACTTTGTCAC 60.752 55.000 0.00 0.00 43.14 3.67
3203 3511 0.033601 AAGGCACCACCACTTTGTCA 60.034 50.000 0.00 0.00 43.14 3.58
3204 3512 1.111277 AAAGGCACCACCACTTTGTC 58.889 50.000 0.00 0.00 43.14 3.18
3205 3513 0.823460 CAAAGGCACCACCACTTTGT 59.177 50.000 7.91 0.00 43.58 2.83
3206 3514 0.104671 CCAAAGGCACCACCACTTTG 59.895 55.000 8.88 8.88 46.45 2.77
3207 3515 2.515288 CCAAAGGCACCACCACTTT 58.485 52.632 0.00 0.00 43.14 2.66
3208 3516 4.275781 CCAAAGGCACCACCACTT 57.724 55.556 0.00 0.00 43.14 3.16
3219 3527 3.061848 AATGGTCGGCGCCAAAGG 61.062 61.111 28.98 10.38 42.48 3.11
3220 3528 1.656818 ATCAATGGTCGGCGCCAAAG 61.657 55.000 28.98 10.81 42.48 2.77
3221 3529 1.653094 GATCAATGGTCGGCGCCAAA 61.653 55.000 28.98 11.42 42.48 3.28
3222 3530 2.045438 ATCAATGGTCGGCGCCAA 60.045 55.556 28.98 4.39 42.48 4.52
3223 3531 2.513666 GATCAATGGTCGGCGCCA 60.514 61.111 28.98 21.73 43.48 5.69
3224 3532 2.203070 AGATCAATGGTCGGCGCC 60.203 61.111 19.07 19.07 0.00 6.53
3225 3533 1.089481 TTGAGATCAATGGTCGGCGC 61.089 55.000 0.00 0.00 0.00 6.53
3226 3534 1.528586 GATTGAGATCAATGGTCGGCG 59.471 52.381 12.62 0.00 45.72 6.46
3227 3535 2.289002 GTGATTGAGATCAATGGTCGGC 59.711 50.000 12.62 0.00 45.72 5.54
3228 3536 3.534554 TGTGATTGAGATCAATGGTCGG 58.465 45.455 12.62 0.00 45.72 4.79
3229 3537 5.327091 GTTTGTGATTGAGATCAATGGTCG 58.673 41.667 12.62 0.00 45.72 4.79
3230 3538 5.183713 TGGTTTGTGATTGAGATCAATGGTC 59.816 40.000 12.62 0.77 45.72 4.02
3231 3539 5.078949 TGGTTTGTGATTGAGATCAATGGT 58.921 37.500 12.62 0.00 45.72 3.55
3232 3540 5.648178 TGGTTTGTGATTGAGATCAATGG 57.352 39.130 12.62 0.00 45.72 3.16
3233 3541 8.847196 AGATATGGTTTGTGATTGAGATCAATG 58.153 33.333 12.62 0.00 45.72 2.82
3235 3543 7.830697 ACAGATATGGTTTGTGATTGAGATCAA 59.169 33.333 0.00 0.00 43.58 2.57
3236 3544 7.281549 CACAGATATGGTTTGTGATTGAGATCA 59.718 37.037 0.00 0.00 43.68 2.92
3237 3545 7.496920 TCACAGATATGGTTTGTGATTGAGATC 59.503 37.037 2.68 0.00 44.39 2.75
3238 3546 7.341030 TCACAGATATGGTTTGTGATTGAGAT 58.659 34.615 2.68 0.00 44.39 2.75
3239 3547 6.710278 TCACAGATATGGTTTGTGATTGAGA 58.290 36.000 2.68 0.00 44.39 3.27
3240 3548 6.990341 TCACAGATATGGTTTGTGATTGAG 57.010 37.500 2.68 0.00 44.39 3.02
3245 3553 7.164803 TGTAATGTCACAGATATGGTTTGTGA 58.835 34.615 2.68 2.68 46.34 3.58
3246 3554 7.376435 TGTAATGTCACAGATATGGTTTGTG 57.624 36.000 0.00 0.00 42.65 3.33
3247 3555 8.579850 AATGTAATGTCACAGATATGGTTTGT 57.420 30.769 0.00 0.00 0.00 2.83
3248 3556 8.131100 GGAATGTAATGTCACAGATATGGTTTG 58.869 37.037 0.00 0.00 0.00 2.93
3249 3557 7.285401 GGGAATGTAATGTCACAGATATGGTTT 59.715 37.037 0.00 0.00 0.00 3.27
3250 3558 6.772716 GGGAATGTAATGTCACAGATATGGTT 59.227 38.462 0.00 0.00 0.00 3.67
3251 3559 6.126507 TGGGAATGTAATGTCACAGATATGGT 60.127 38.462 0.00 0.00 0.00 3.55
3252 3560 6.298361 TGGGAATGTAATGTCACAGATATGG 58.702 40.000 0.00 0.00 0.00 2.74
3253 3561 7.662669 TGATGGGAATGTAATGTCACAGATATG 59.337 37.037 0.00 0.00 28.79 1.78
3254 3562 7.748677 TGATGGGAATGTAATGTCACAGATAT 58.251 34.615 0.00 0.00 28.79 1.63
3255 3563 7.135591 TGATGGGAATGTAATGTCACAGATA 57.864 36.000 0.00 0.00 28.79 1.98
3256 3564 6.005066 TGATGGGAATGTAATGTCACAGAT 57.995 37.500 0.00 0.00 28.79 2.90
3257 3565 5.045651 ACTGATGGGAATGTAATGTCACAGA 60.046 40.000 0.00 0.00 28.79 3.41
3258 3566 5.188434 ACTGATGGGAATGTAATGTCACAG 58.812 41.667 0.00 0.00 28.79 3.66
3259 3567 5.178096 ACTGATGGGAATGTAATGTCACA 57.822 39.130 0.00 0.00 0.00 3.58
3260 3568 7.807977 ATTACTGATGGGAATGTAATGTCAC 57.192 36.000 0.00 0.00 35.22 3.67
3261 3569 8.821686 AAATTACTGATGGGAATGTAATGTCA 57.178 30.769 0.00 0.00 36.23 3.58
3262 3570 9.125026 AGAAATTACTGATGGGAATGTAATGTC 57.875 33.333 0.00 0.00 38.72 3.06
3263 3571 8.906867 CAGAAATTACTGATGGGAATGTAATGT 58.093 33.333 0.00 0.00 39.94 2.71
3264 3572 9.123902 TCAGAAATTACTGATGGGAATGTAATG 57.876 33.333 0.00 0.00 41.21 1.90
3265 3573 9.699410 TTCAGAAATTACTGATGGGAATGTAAT 57.301 29.630 0.00 0.00 44.67 1.89
3266 3574 9.699410 ATTCAGAAATTACTGATGGGAATGTAA 57.301 29.630 0.00 0.00 44.67 2.41
3267 3575 9.123902 CATTCAGAAATTACTGATGGGAATGTA 57.876 33.333 0.00 0.00 44.67 2.29
3268 3576 7.835682 TCATTCAGAAATTACTGATGGGAATGT 59.164 33.333 0.00 0.00 44.67 2.71
3269 3577 8.229253 TCATTCAGAAATTACTGATGGGAATG 57.771 34.615 0.00 0.00 44.67 2.67
3271 3579 9.919416 TTATCATTCAGAAATTACTGATGGGAA 57.081 29.630 6.49 0.00 44.67 3.97
3272 3580 9.565090 CTTATCATTCAGAAATTACTGATGGGA 57.435 33.333 6.49 0.00 44.67 4.37
3273 3581 8.295288 GCTTATCATTCAGAAATTACTGATGGG 58.705 37.037 6.49 2.01 44.67 4.00
3274 3582 9.064706 AGCTTATCATTCAGAAATTACTGATGG 57.935 33.333 6.49 0.00 44.67 3.51
3277 3585 9.671279 TCAAGCTTATCATTCAGAAATTACTGA 57.329 29.630 0.00 0.00 43.83 3.41
3278 3586 9.932699 CTCAAGCTTATCATTCAGAAATTACTG 57.067 33.333 0.00 0.00 39.02 2.74
3279 3587 8.619546 GCTCAAGCTTATCATTCAGAAATTACT 58.380 33.333 0.00 0.00 38.21 2.24
3280 3588 8.779603 GCTCAAGCTTATCATTCAGAAATTAC 57.220 34.615 0.00 0.00 38.21 1.89
3309 3617 0.748005 ATGACAGGGCACATAACCGC 60.748 55.000 0.00 0.00 0.00 5.68
3311 3619 2.446435 ACAATGACAGGGCACATAACC 58.554 47.619 0.00 0.00 0.00 2.85
3314 3622 4.887071 GGAAATACAATGACAGGGCACATA 59.113 41.667 0.00 0.00 0.00 2.29
3322 3630 7.503566 ACATATTCCCAGGAAATACAATGACAG 59.496 37.037 2.65 0.00 37.69 3.51
3352 3660 1.896660 GCAACGCCCAAGTTCAGGA 60.897 57.895 0.00 0.00 30.96 3.86
3355 3663 1.034838 ACAAGCAACGCCCAAGTTCA 61.035 50.000 0.00 0.00 30.96 3.18
3359 3667 1.283793 CTGACAAGCAACGCCCAAG 59.716 57.895 0.00 0.00 0.00 3.61
3363 3671 4.043200 GCCCTGACAAGCAACGCC 62.043 66.667 0.00 0.00 0.00 5.68
3364 3672 2.980233 AGCCCTGACAAGCAACGC 60.980 61.111 0.42 0.00 0.00 4.84
3366 3674 0.819259 TGACAGCCCTGACAAGCAAC 60.819 55.000 1.69 0.00 32.80 4.17
3370 3678 1.901591 ACAATGACAGCCCTGACAAG 58.098 50.000 1.69 2.82 38.57 3.16
3375 3683 3.379372 CAGGAAATACAATGACAGCCCTG 59.621 47.826 0.00 0.00 33.65 4.45
3377 3685 2.689983 CCAGGAAATACAATGACAGCCC 59.310 50.000 0.00 0.00 0.00 5.19
3378 3686 2.689983 CCCAGGAAATACAATGACAGCC 59.310 50.000 0.00 0.00 0.00 4.85
3381 3689 3.448093 TGCCCAGGAAATACAATGACA 57.552 42.857 0.00 0.00 0.00 3.58
3382 3690 5.536161 ACATATGCCCAGGAAATACAATGAC 59.464 40.000 1.58 0.00 0.00 3.06
3383 3691 5.704354 ACATATGCCCAGGAAATACAATGA 58.296 37.500 1.58 0.00 0.00 2.57
3384 3692 7.707624 ATACATATGCCCAGGAAATACAATG 57.292 36.000 1.58 0.00 0.00 2.82
3385 3693 9.466497 CTTATACATATGCCCAGGAAATACAAT 57.534 33.333 1.58 0.00 0.00 2.71
3386 3694 7.393234 GCTTATACATATGCCCAGGAAATACAA 59.607 37.037 1.58 0.00 0.00 2.41
3387 3695 6.884295 GCTTATACATATGCCCAGGAAATACA 59.116 38.462 1.58 0.00 0.00 2.29
3388 3696 6.318900 GGCTTATACATATGCCCAGGAAATAC 59.681 42.308 12.85 0.00 43.82 1.89
3389 3697 6.423182 GGCTTATACATATGCCCAGGAAATA 58.577 40.000 12.85 0.00 43.82 1.40
3390 3698 5.264395 GGCTTATACATATGCCCAGGAAAT 58.736 41.667 12.85 0.00 43.82 2.17
3391 3699 4.662278 GGCTTATACATATGCCCAGGAAA 58.338 43.478 12.85 0.00 43.82 3.13
3392 3700 3.307410 CGGCTTATACATATGCCCAGGAA 60.307 47.826 16.40 0.00 45.65 3.36
3393 3701 2.236146 CGGCTTATACATATGCCCAGGA 59.764 50.000 16.40 0.00 45.65 3.86
3394 3702 2.632377 CGGCTTATACATATGCCCAGG 58.368 52.381 16.40 3.90 45.65 4.45
3395 3703 2.009774 GCGGCTTATACATATGCCCAG 58.990 52.381 16.40 8.00 45.65 4.45
3396 3704 1.628340 AGCGGCTTATACATATGCCCA 59.372 47.619 16.40 0.00 45.65 5.36
3397 3705 2.403252 AGCGGCTTATACATATGCCC 57.597 50.000 16.40 11.15 45.65 5.36
3398 3706 3.865745 CAGTAGCGGCTTATACATATGCC 59.134 47.826 8.26 13.56 45.23 4.40
3399 3707 4.495422 ACAGTAGCGGCTTATACATATGC 58.505 43.478 8.26 0.00 33.95 3.14
3400 3708 7.085052 TCTACAGTAGCGGCTTATACATATG 57.915 40.000 8.26 0.00 0.00 1.78
3401 3709 7.556635 TCATCTACAGTAGCGGCTTATACATAT 59.443 37.037 8.26 0.00 0.00 1.78
3402 3710 6.882678 TCATCTACAGTAGCGGCTTATACATA 59.117 38.462 8.26 0.00 0.00 2.29
3403 3711 5.710567 TCATCTACAGTAGCGGCTTATACAT 59.289 40.000 8.26 0.00 0.00 2.29
3404 3712 5.067954 TCATCTACAGTAGCGGCTTATACA 58.932 41.667 8.26 0.00 0.00 2.29
3405 3713 5.624344 TCATCTACAGTAGCGGCTTATAC 57.376 43.478 8.26 0.00 0.00 1.47
3406 3714 6.127703 GGAATCATCTACAGTAGCGGCTTATA 60.128 42.308 8.26 0.00 0.00 0.98
3407 3715 5.336849 GGAATCATCTACAGTAGCGGCTTAT 60.337 44.000 8.26 0.00 0.00 1.73
3408 3716 4.022242 GGAATCATCTACAGTAGCGGCTTA 60.022 45.833 8.26 0.00 0.00 3.09
3409 3717 3.243907 GGAATCATCTACAGTAGCGGCTT 60.244 47.826 8.26 0.00 0.00 4.35
3410 3718 2.297597 GGAATCATCTACAGTAGCGGCT 59.702 50.000 7.98 7.98 0.00 5.52
3411 3719 2.297597 AGGAATCATCTACAGTAGCGGC 59.702 50.000 2.26 0.00 0.00 6.53
3412 3720 3.570125 TCAGGAATCATCTACAGTAGCGG 59.430 47.826 2.26 0.00 0.00 5.52
3413 3721 4.837896 TCAGGAATCATCTACAGTAGCG 57.162 45.455 2.26 0.00 0.00 4.26
3414 3722 6.648725 GGAAATCAGGAATCATCTACAGTAGC 59.351 42.308 2.26 0.00 0.00 3.58
3415 3723 7.158021 GGGAAATCAGGAATCATCTACAGTAG 58.842 42.308 0.47 0.47 0.00 2.57
3416 3724 6.043243 GGGGAAATCAGGAATCATCTACAGTA 59.957 42.308 0.00 0.00 0.00 2.74
3417 3725 5.163152 GGGGAAATCAGGAATCATCTACAGT 60.163 44.000 0.00 0.00 0.00 3.55
3418 3726 5.163163 TGGGGAAATCAGGAATCATCTACAG 60.163 44.000 0.00 0.00 0.00 2.74
3419 3727 4.726317 TGGGGAAATCAGGAATCATCTACA 59.274 41.667 0.00 0.00 0.00 2.74
3420 3728 5.310409 TGGGGAAATCAGGAATCATCTAC 57.690 43.478 0.00 0.00 0.00 2.59
3428 3736 1.999295 TGGTCATGGGGAAATCAGGAA 59.001 47.619 0.00 0.00 0.00 3.36
3441 3749 1.979855 TCACAACAACCCTGGTCATG 58.020 50.000 0.00 0.00 0.00 3.07
3445 3753 2.443255 AGATCTTCACAACAACCCTGGT 59.557 45.455 0.00 0.00 0.00 4.00
3446 3756 3.077359 GAGATCTTCACAACAACCCTGG 58.923 50.000 0.00 0.00 0.00 4.45
3481 3791 6.475076 CAGTAGAGAATCAGATTGTAGCACAC 59.525 42.308 0.00 0.00 37.82 3.82
3489 3799 9.978044 TCATATTCACAGTAGAGAATCAGATTG 57.022 33.333 0.00 0.00 36.61 2.67
3499 3809 9.241919 ACAGGAGATATCATATTCACAGTAGAG 57.758 37.037 5.32 0.00 0.00 2.43
3503 3813 7.930325 CACAACAGGAGATATCATATTCACAGT 59.070 37.037 5.32 0.00 0.00 3.55
3504 3814 8.146412 TCACAACAGGAGATATCATATTCACAG 58.854 37.037 5.32 0.00 0.00 3.66
3505 3815 8.021898 TCACAACAGGAGATATCATATTCACA 57.978 34.615 5.32 0.00 0.00 3.58
3517 3827 3.822735 CCACAACAATCACAACAGGAGAT 59.177 43.478 0.00 0.00 0.00 2.75
3554 3864 0.407139 AAGCATTGGCCTCTTCAGGT 59.593 50.000 3.32 0.00 42.74 4.00
3555 3865 0.815734 CAAGCATTGGCCTCTTCAGG 59.184 55.000 3.32 0.00 43.94 3.86
3574 3884 2.545946 GTCACTTCTTCACTCCAAGCAC 59.454 50.000 0.00 0.00 0.00 4.40
3576 3886 3.118905 AGTCACTTCTTCACTCCAAGC 57.881 47.619 0.00 0.00 0.00 4.01
3586 3896 2.717639 AGGTGTGCAAGTCACTTCTT 57.282 45.000 5.97 0.00 45.81 2.52
3591 3901 1.953559 TCAGAAGGTGTGCAAGTCAC 58.046 50.000 0.00 0.00 45.82 3.67
3603 3913 2.092212 ACATTAGCACCCCATCAGAAGG 60.092 50.000 0.00 0.00 0.00 3.46
3610 3920 2.748209 GGGTAACATTAGCACCCCAT 57.252 50.000 3.46 0.00 45.34 4.00
3615 3925 1.401905 GCAGCAGGGTAACATTAGCAC 59.598 52.381 3.46 0.00 39.74 4.40
3637 3947 6.545504 TCTACAATCAAGTGCAAGAAGAAC 57.454 37.500 0.00 0.00 0.00 3.01
3662 3972 5.472478 CAGCAGATCATACAATTACCAGCAT 59.528 40.000 0.00 0.00 0.00 3.79
3742 4052 5.596361 ACTACACATGAGAGAAGACATAGGG 59.404 44.000 0.00 0.00 0.00 3.53
3743 4053 6.707440 ACTACACATGAGAGAAGACATAGG 57.293 41.667 0.00 0.00 0.00 2.57
3744 4054 8.867935 CAAAACTACACATGAGAGAAGACATAG 58.132 37.037 0.00 0.00 0.00 2.23
3746 4056 6.652481 CCAAAACTACACATGAGAGAAGACAT 59.348 38.462 0.00 0.00 0.00 3.06
3750 4060 4.756642 TGCCAAAACTACACATGAGAGAAG 59.243 41.667 0.00 0.00 0.00 2.85
3753 4063 5.633830 ATTGCCAAAACTACACATGAGAG 57.366 39.130 0.00 0.00 0.00 3.20
3754 4064 5.278907 CCAATTGCCAAAACTACACATGAGA 60.279 40.000 0.00 0.00 0.00 3.27
3756 4066 4.262377 CCCAATTGCCAAAACTACACATGA 60.262 41.667 0.00 0.00 0.00 3.07
3757 4067 3.995705 CCCAATTGCCAAAACTACACATG 59.004 43.478 0.00 0.00 0.00 3.21
3759 4069 3.034635 ACCCAATTGCCAAAACTACACA 58.965 40.909 0.00 0.00 0.00 3.72
3760 4070 3.554129 GGACCCAATTGCCAAAACTACAC 60.554 47.826 0.00 0.00 0.00 2.90
3764 4074 1.693606 CAGGACCCAATTGCCAAAACT 59.306 47.619 0.00 0.00 0.00 2.66
3765 4075 1.877680 GCAGGACCCAATTGCCAAAAC 60.878 52.381 0.00 0.00 31.79 2.43
3766 4076 0.396060 GCAGGACCCAATTGCCAAAA 59.604 50.000 0.00 0.00 31.79 2.44
3767 4077 0.471591 AGCAGGACCCAATTGCCAAA 60.472 50.000 0.00 0.00 38.58 3.28
3768 4078 1.155859 AGCAGGACCCAATTGCCAA 59.844 52.632 0.00 0.00 38.58 4.52
3769 4079 1.607178 CAGCAGGACCCAATTGCCA 60.607 57.895 0.00 0.00 38.58 4.92
3770 4080 1.607467 ACAGCAGGACCCAATTGCC 60.607 57.895 0.00 0.00 38.58 4.52
3771 4081 1.181098 ACACAGCAGGACCCAATTGC 61.181 55.000 0.00 0.00 38.09 3.56
3772 4082 0.599558 CACACAGCAGGACCCAATTG 59.400 55.000 0.00 0.00 0.00 2.32
3773 4083 0.185901 ACACACAGCAGGACCCAATT 59.814 50.000 0.00 0.00 0.00 2.32
3774 4084 0.538057 CACACACAGCAGGACCCAAT 60.538 55.000 0.00 0.00 0.00 3.16
3775 4085 1.152984 CACACACAGCAGGACCCAA 60.153 57.895 0.00 0.00 0.00 4.12
3776 4086 2.374525 ACACACACAGCAGGACCCA 61.375 57.895 0.00 0.00 0.00 4.51
3777 4087 1.893808 CACACACACAGCAGGACCC 60.894 63.158 0.00 0.00 0.00 4.46
3778 4088 2.546494 GCACACACACAGCAGGACC 61.546 63.158 0.00 0.00 0.00 4.46
3779 4089 2.885676 CGCACACACACAGCAGGAC 61.886 63.158 0.00 0.00 0.00 3.85
3780 4090 2.588596 CGCACACACACAGCAGGA 60.589 61.111 0.00 0.00 0.00 3.86
3781 4091 1.992233 AAACGCACACACACAGCAGG 61.992 55.000 0.00 0.00 0.00 4.85
3782 4092 0.862701 CAAACGCACACACACAGCAG 60.863 55.000 0.00 0.00 0.00 4.24
3783 4093 1.136356 CAAACGCACACACACAGCA 59.864 52.632 0.00 0.00 0.00 4.41
3784 4094 1.586042 CCAAACGCACACACACAGC 60.586 57.895 0.00 0.00 0.00 4.40
3785 4095 0.170116 AACCAAACGCACACACACAG 59.830 50.000 0.00 0.00 0.00 3.66
3786 4096 0.169230 GAACCAAACGCACACACACA 59.831 50.000 0.00 0.00 0.00 3.72
3787 4097 0.524604 GGAACCAAACGCACACACAC 60.525 55.000 0.00 0.00 0.00 3.82
3788 4098 0.678366 AGGAACCAAACGCACACACA 60.678 50.000 0.00 0.00 0.00 3.72
3789 4099 0.248458 CAGGAACCAAACGCACACAC 60.248 55.000 0.00 0.00 0.00 3.82
3790 4100 1.999071 GCAGGAACCAAACGCACACA 61.999 55.000 0.00 0.00 0.00 3.72
3791 4101 1.299089 GCAGGAACCAAACGCACAC 60.299 57.895 0.00 0.00 0.00 3.82
3792 4102 1.453015 AGCAGGAACCAAACGCACA 60.453 52.632 0.00 0.00 0.00 4.57
3793 4103 1.008538 CAGCAGGAACCAAACGCAC 60.009 57.895 0.00 0.00 0.00 5.34
3794 4104 1.453015 ACAGCAGGAACCAAACGCA 60.453 52.632 0.00 0.00 0.00 5.24
3795 4105 1.008538 CACAGCAGGAACCAAACGC 60.009 57.895 0.00 0.00 0.00 4.84
3796 4106 0.738389 AACACAGCAGGAACCAAACG 59.262 50.000 0.00 0.00 0.00 3.60
3797 4107 1.748493 TCAACACAGCAGGAACCAAAC 59.252 47.619 0.00 0.00 0.00 2.93
3798 4108 1.748493 GTCAACACAGCAGGAACCAAA 59.252 47.619 0.00 0.00 0.00 3.28
3799 4109 1.388547 GTCAACACAGCAGGAACCAA 58.611 50.000 0.00 0.00 0.00 3.67
3800 4110 0.465460 GGTCAACACAGCAGGAACCA 60.465 55.000 0.00 0.00 0.00 3.67
3801 4111 0.465460 TGGTCAACACAGCAGGAACC 60.465 55.000 0.00 0.00 0.00 3.62
3844 4161 4.501400 GGAACAAAGAAAACCCTCACATGG 60.501 45.833 0.00 0.00 0.00 3.66
3853 4170 7.712797 TGTTATCTTCAGGAACAAAGAAAACC 58.287 34.615 0.00 0.00 36.32 3.27
3862 4179 9.177608 CTTTCCAATATGTTATCTTCAGGAACA 57.822 33.333 0.00 0.00 37.47 3.18
3877 4285 5.730568 GCAAACCGAGTAGCTTTCCAATATG 60.731 44.000 0.00 0.00 0.00 1.78
3895 4303 1.544724 TGATAACAGCCCTGCAAACC 58.455 50.000 0.00 0.00 0.00 3.27
3896 4304 2.159198 CCATGATAACAGCCCTGCAAAC 60.159 50.000 0.00 0.00 0.00 2.93
3920 4343 1.002544 GGGCTATGGTAGATGGCAGTC 59.997 57.143 0.00 0.00 0.00 3.51
3930 4353 3.408157 TTCTGTAGTGGGGCTATGGTA 57.592 47.619 0.00 0.00 31.50 3.25
3941 4364 1.897398 GCGCACCGGTTTCTGTAGTG 61.897 60.000 2.97 0.00 0.00 2.74
4004 5985 6.016276 ACACTTTGCCTTTCCAAATACAGTAG 60.016 38.462 0.00 0.00 34.50 2.57
4005 5986 5.830991 ACACTTTGCCTTTCCAAATACAGTA 59.169 36.000 0.00 0.00 34.50 2.74
4006 5987 4.649218 ACACTTTGCCTTTCCAAATACAGT 59.351 37.500 0.00 0.00 34.50 3.55
4007 5988 5.200368 ACACTTTGCCTTTCCAAATACAG 57.800 39.130 0.00 0.00 34.50 2.74
4008 5989 5.606348 AACACTTTGCCTTTCCAAATACA 57.394 34.783 0.00 0.00 34.50 2.29
4009 5990 7.360017 GCATAAACACTTTGCCTTTCCAAATAC 60.360 37.037 0.00 0.00 34.50 1.89
4010 5991 6.648725 GCATAAACACTTTGCCTTTCCAAATA 59.351 34.615 0.00 0.00 34.50 1.40
4011 5992 5.469760 GCATAAACACTTTGCCTTTCCAAAT 59.530 36.000 0.00 0.00 34.50 2.32
4012 5993 4.813697 GCATAAACACTTTGCCTTTCCAAA 59.186 37.500 0.00 0.00 33.93 3.28
4042 6179 1.226746 CCGGTTCAGTTCAGTTGGTC 58.773 55.000 0.00 0.00 0.00 4.02
4071 6208 5.530915 AGATTTGAACCTGACAATTTCGACA 59.469 36.000 0.00 0.00 0.00 4.35
4137 6276 9.254133 GCAGTTCAGCTGGTATACATATATATG 57.746 37.037 19.21 19.21 45.14 1.78
4152 6292 2.163010 CCAATACCAAGCAGTTCAGCTG 59.837 50.000 7.63 7.63 45.89 4.24
4205 6345 3.036429 GCTCCGCCTGATCCTGGTT 62.036 63.158 0.00 0.00 0.00 3.67
4231 6371 1.880675 AGATGTAGCCATACGAGTCGG 59.119 52.381 18.30 0.00 34.39 4.79
4235 6375 4.051922 GTTTCCAGATGTAGCCATACGAG 58.948 47.826 0.00 0.00 34.39 4.18
4236 6376 3.449377 TGTTTCCAGATGTAGCCATACGA 59.551 43.478 0.00 0.00 34.39 3.43
4241 6381 7.716799 ATAAATTTGTTTCCAGATGTAGCCA 57.283 32.000 0.00 0.00 0.00 4.75
4262 6402 7.011950 CCTGTTTTGTGCCTCGATGTATTATAA 59.988 37.037 0.00 0.00 0.00 0.98
4271 6411 1.347707 TCTCCTGTTTTGTGCCTCGAT 59.652 47.619 0.00 0.00 0.00 3.59
4272 6412 0.756294 TCTCCTGTTTTGTGCCTCGA 59.244 50.000 0.00 0.00 0.00 4.04
4276 6416 1.604278 GTGTCTCTCCTGTTTTGTGCC 59.396 52.381 0.00 0.00 0.00 5.01
4295 6435 0.912006 GAAGGAGAGGGGAAGGCTGT 60.912 60.000 0.00 0.00 0.00 4.40
4297 6437 1.307430 GGAAGGAGAGGGGAAGGCT 60.307 63.158 0.00 0.00 0.00 4.58
4303 6443 2.364317 TCGCAGGAAGGAGAGGGG 60.364 66.667 0.00 0.00 0.00 4.79
4351 6491 2.030805 ACTTGCTTCTTCCATTCGTTGC 60.031 45.455 0.00 0.00 0.00 4.17
4431 6572 9.539825 TTAAGCAATGTTCAGCTCAATTTTAAA 57.460 25.926 0.00 0.00 40.90 1.52
4434 6575 6.146673 GCTTAAGCAATGTTCAGCTCAATTTT 59.853 34.615 22.59 0.00 40.90 1.82
4476 6618 5.504755 GTGTTTATCAACGCTCAAAATCTCG 59.495 40.000 0.00 0.00 39.87 4.04
4514 6658 8.389603 CAATGTTCAGTTTAAAGTGTGCATTTT 58.610 29.630 26.20 15.91 35.21 1.82
4596 6740 4.965283 TTTGGGGGAACAAAGAGGATAT 57.035 40.909 0.00 0.00 35.57 1.63
4629 6773 4.919754 GCTTGTCAAAAGATTCACCATCAC 59.080 41.667 0.00 0.00 33.75 3.06
4630 6774 4.022068 GGCTTGTCAAAAGATTCACCATCA 60.022 41.667 0.00 0.00 33.75 3.07
4664 6808 3.077359 CACTGTCCTCCAATTGAACCTC 58.923 50.000 7.12 0.00 0.00 3.85
4667 6811 4.338118 TGTTTCACTGTCCTCCAATTGAAC 59.662 41.667 7.12 0.00 29.25 3.18
4668 6812 4.531854 TGTTTCACTGTCCTCCAATTGAA 58.468 39.130 7.12 0.00 0.00 2.69
4670 6814 4.916983 TTGTTTCACTGTCCTCCAATTG 57.083 40.909 0.00 0.00 0.00 2.32
4671 6815 5.739935 GCAATTGTTTCACTGTCCTCCAATT 60.740 40.000 7.40 0.00 32.84 2.32
4672 6816 4.262164 GCAATTGTTTCACTGTCCTCCAAT 60.262 41.667 7.40 0.00 0.00 3.16
4681 6827 4.923893 TCAGTTCTGCAATTGTTTCACTG 58.076 39.130 17.18 17.18 33.19 3.66
4722 6868 1.279271 GACCACTGCTCAGGTTATGGT 59.721 52.381 8.94 8.94 43.09 3.55
4742 6888 7.346695 CAAATTTTACTGCTGAAATTGTGGTG 58.653 34.615 0.00 0.00 36.06 4.17
4756 6902 3.573967 AGCTCACACCCCAAATTTTACTG 59.426 43.478 0.00 0.00 0.00 2.74
4781 6927 3.350219 ACTGGCAACCATAGTTAGTGG 57.650 47.619 0.00 0.00 42.55 4.00
4815 6961 8.638685 ACTGTTTGACATTGGTATATACGTAC 57.361 34.615 6.79 0.00 0.00 3.67
4818 6964 8.761497 CCTAACTGTTTGACATTGGTATATACG 58.239 37.037 6.79 0.00 0.00 3.06
4819 6965 8.557029 GCCTAACTGTTTGACATTGGTATATAC 58.443 37.037 4.14 4.14 0.00 1.47
4820 6966 8.491134 AGCCTAACTGTTTGACATTGGTATATA 58.509 33.333 0.00 0.00 0.00 0.86
4821 6967 7.346471 AGCCTAACTGTTTGACATTGGTATAT 58.654 34.615 0.00 0.00 0.00 0.86
4824 6970 4.980573 AGCCTAACTGTTTGACATTGGTA 58.019 39.130 0.00 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.