Multiple sequence alignment - TraesCS7B01G476300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G476300 chr7B 100.000 7770 0 0 1 7770 732517499 732525268 0.000000e+00 14349.0
1 TraesCS7B01G476300 chr7B 92.483 1051 63 9 6606 7648 345993421 345994463 0.000000e+00 1489.0
2 TraesCS7B01G476300 chr7B 90.987 1054 68 11 407 1442 357809985 357811029 0.000000e+00 1395.0
3 TraesCS7B01G476300 chr7B 93.582 670 28 7 1087 1755 423441566 423440911 0.000000e+00 985.0
4 TraesCS7B01G476300 chr7B 96.597 382 12 1 1477 1857 357811027 357811408 3.960000e-177 632.0
5 TraesCS7B01G476300 chr7B 92.838 377 25 2 407 782 282978961 282979336 5.300000e-151 545.0
6 TraesCS7B01G476300 chr7B 96.341 328 12 0 6360 6687 423436739 423436412 2.470000e-149 540.0
7 TraesCS7B01G476300 chr7B 92.553 376 18 2 407 782 423443045 423442680 1.480000e-146 531.0
8 TraesCS7B01G476300 chr7B 91.599 369 9 4 6010 6357 423438575 423438208 2.520000e-134 490.0
9 TraesCS7B01G476300 chr7B 81.925 426 49 13 3335 3753 740458612 740458208 1.250000e-87 335.0
10 TraesCS7B01G476300 chr7B 97.041 169 5 0 2320 2488 357811398 357811566 1.280000e-72 285.0
11 TraesCS7B01G476300 chr7B 95.105 143 7 0 4743 4885 423438792 423438650 7.840000e-55 226.0
12 TraesCS7B01G476300 chr4A 97.488 4657 88 17 2708 7353 284252017 284247379 0.000000e+00 7925.0
13 TraesCS7B01G476300 chr4A 96.901 1452 27 6 407 1857 284253850 284252416 0.000000e+00 2416.0
14 TraesCS7B01G476300 chr4A 99.569 464 2 0 1856 2319 663199345 663199808 0.000000e+00 846.0
15 TraesCS7B01G476300 chr4A 94.811 424 7 1 2320 2743 284252426 284252018 0.000000e+00 647.0
16 TraesCS7B01G476300 chr2A 99.769 3031 6 1 2708 5737 361485652 361488682 0.000000e+00 5557.0
17 TraesCS7B01G476300 chr2A 97.929 2656 51 4 2708 5359 300218371 300215716 0.000000e+00 4597.0
18 TraesCS7B01G476300 chr2A 97.785 2122 23 8 5673 7770 361488679 361490800 0.000000e+00 3637.0
19 TraesCS7B01G476300 chr2A 96.325 2095 63 11 5645 7732 300215725 300213638 0.000000e+00 3430.0
20 TraesCS7B01G476300 chr2A 99.242 1451 7 2 407 1857 361483792 361485238 0.000000e+00 2615.0
21 TraesCS7B01G476300 chr2A 95.813 1457 41 8 407 1857 300220227 300218785 0.000000e+00 2335.0
22 TraesCS7B01G476300 chr2A 99.145 468 4 0 1852 2319 576448609 576448142 0.000000e+00 843.0
23 TraesCS7B01G476300 chr2A 100.000 424 0 0 2320 2743 361485228 361485651 0.000000e+00 784.0
24 TraesCS7B01G476300 chr2A 98.585 424 6 0 2320 2743 300218795 300218372 0.000000e+00 750.0
25 TraesCS7B01G476300 chr2A 91.522 460 36 3 5196 5653 168429772 168430230 1.420000e-176 630.0
26 TraesCS7B01G476300 chr7A 97.881 2879 57 4 2708 5582 240675155 240672277 0.000000e+00 4975.0
27 TraesCS7B01G476300 chr7A 96.987 1792 45 7 5574 7362 240670680 240668895 0.000000e+00 3001.0
28 TraesCS7B01G476300 chr7A 96.769 1238 30 3 629 1857 240676804 240675568 0.000000e+00 2056.0
29 TraesCS7B01G476300 chr7A 97.877 424 8 1 2320 2743 240675578 240675156 0.000000e+00 732.0
30 TraesCS7B01G476300 chr7A 94.444 216 12 0 406 621 240678782 240678567 4.490000e-87 333.0
31 TraesCS7B01G476300 chr3D 94.192 1894 89 13 2866 4743 20950134 20948246 0.000000e+00 2868.0
32 TraesCS7B01G476300 chr3B 92.904 1973 116 10 2794 4743 568420980 568422951 0.000000e+00 2846.0
33 TraesCS7B01G476300 chr3B 92.769 1383 85 11 6360 7732 279515710 279514333 0.000000e+00 1986.0
34 TraesCS7B01G476300 chr3B 92.827 1185 62 10 463 1629 279522102 279520923 0.000000e+00 1696.0
35 TraesCS7B01G476300 chr3B 95.981 622 21 4 4743 5363 279518337 279517719 0.000000e+00 1007.0
36 TraesCS7B01G476300 chr3B 99.784 463 1 0 1857 2319 807232843 807232381 0.000000e+00 850.0
37 TraesCS7B01G476300 chr3B 92.724 536 18 3 5843 6357 279517710 279517175 0.000000e+00 754.0
38 TraesCS7B01G476300 chr3B 96.899 387 11 1 2320 2706 279518756 279518371 0.000000e+00 647.0
39 TraesCS7B01G476300 chr2B 93.537 1640 73 13 4743 6357 300324909 300326540 0.000000e+00 2410.0
40 TraesCS7B01G476300 chr2B 92.123 1371 82 8 6362 7723 300328013 300329366 0.000000e+00 1910.0
41 TraesCS7B01G476300 chr2B 94.043 705 37 4 1154 1857 300323811 300324511 0.000000e+00 1064.0
42 TraesCS7B01G476300 chr2B 99.784 463 0 1 1857 2319 705606513 705606974 0.000000e+00 848.0
43 TraesCS7B01G476300 chr2B 99.145 468 4 0 1855 2322 238261389 238261856 0.000000e+00 843.0
44 TraesCS7B01G476300 chr2B 93.798 387 12 9 2320 2706 300324501 300324875 8.750000e-159 571.0
45 TraesCS7B01G476300 chr5B 93.183 1379 80 9 6360 7729 570953976 570955349 0.000000e+00 2013.0
46 TraesCS7B01G476300 chr5B 94.376 729 20 3 5650 6357 172631143 172630415 0.000000e+00 1099.0
47 TraesCS7B01G476300 chr5B 94.286 560 29 1 1029 1588 570950869 570951425 0.000000e+00 854.0
48 TraesCS7B01G476300 chr5B 95.392 217 9 1 2490 2706 185033618 185033403 2.080000e-90 344.0
49 TraesCS7B01G476300 chr5B 91.304 46 4 0 4092 4137 611540282 611540237 6.510000e-06 63.9
50 TraesCS7B01G476300 chr6B 92.119 1383 95 8 6360 7732 369656906 369655528 0.000000e+00 1938.0
51 TraesCS7B01G476300 chr6B 90.803 1109 59 13 537 1629 369663165 369662084 0.000000e+00 1443.0
52 TraesCS7B01G476300 chr6B 100.000 464 0 0 1857 2320 476706338 476705875 0.000000e+00 857.0
53 TraesCS7B01G476300 chr6B 99.784 464 1 0 1857 2320 476707280 476706817 0.000000e+00 852.0
54 TraesCS7B01G476300 chr6B 99.784 464 1 0 1857 2320 476707751 476707288 0.000000e+00 852.0
55 TraesCS7B01G476300 chr6B 92.910 536 13 7 5843 6357 369658898 369658367 0.000000e+00 756.0
56 TraesCS7B01G476300 chr6B 96.641 387 12 1 2320 2706 369659908 369659523 6.570000e-180 641.0
57 TraesCS7B01G476300 chr4B 95.204 834 40 0 4820 5653 179434619 179435452 0.000000e+00 1319.0
58 TraesCS7B01G476300 chr4B 92.527 562 35 1 881 1442 558550257 558549703 0.000000e+00 798.0
59 TraesCS7B01G476300 chr4B 100.000 169 0 0 2320 2488 558549354 558549186 5.850000e-81 313.0
60 TraesCS7B01G476300 chr1B 92.934 835 56 2 4820 5653 156699440 156698608 0.000000e+00 1212.0
61 TraesCS7B01G476300 chr1B 93.572 809 51 1 4820 5628 192769715 192768908 0.000000e+00 1205.0
62 TraesCS7B01G476300 chr1B 91.617 334 28 0 407 740 500275604 500275271 5.490000e-126 462.0
63 TraesCS7B01G476300 chr1B 81.863 408 40 13 4298 4697 72000781 72000400 5.850000e-81 313.0
64 TraesCS7B01G476300 chr1B 93.671 79 5 0 7654 7732 296599742 296599664 1.370000e-22 119.0
65 TraesCS7B01G476300 chr7D 88.530 898 51 15 2745 3615 1142429 1141557 0.000000e+00 1040.0
66 TraesCS7B01G476300 chr7D 90.909 352 19 6 75 424 27351604 27351264 1.980000e-125 460.0
67 TraesCS7B01G476300 chr7D 90.426 188 16 2 2499 2686 33186766 33186581 6.020000e-61 246.0
68 TraesCS7B01G476300 chr7D 97.468 79 2 0 1 79 27365249 27365171 1.360000e-27 135.0
69 TraesCS7B01G476300 chr5A 92.730 729 27 5 5650 6357 165335438 165334715 0.000000e+00 1029.0
70 TraesCS7B01G476300 chr1A 89.583 816 62 14 406 1204 244185100 244184291 0.000000e+00 1014.0
71 TraesCS7B01G476300 chr1A 93.494 538 31 3 1322 1856 244181571 244181035 0.000000e+00 797.0
72 TraesCS7B01G476300 chr1A 93.694 444 27 1 877 1319 435570574 435570131 0.000000e+00 664.0
73 TraesCS7B01G476300 chr1A 81.731 416 42 13 4298 4705 482775724 482775335 4.530000e-82 316.0
74 TraesCS7B01G476300 chr5D 92.181 729 27 6 5650 6357 175758978 175759697 0.000000e+00 1003.0
75 TraesCS7B01G476300 chr5D 81.250 416 43 18 4300 4705 236479345 236478955 3.520000e-78 303.0
76 TraesCS7B01G476300 chr5D 81.250 416 42 15 4300 4705 236485172 236484783 3.520000e-78 303.0
77 TraesCS7B01G476300 chr5D 81.250 416 42 15 4300 4705 236488711 236488322 3.520000e-78 303.0
78 TraesCS7B01G476300 chr5D 81.250 416 43 15 4300 4705 236491401 236491011 3.520000e-78 303.0
79 TraesCS7B01G476300 chr5D 93.671 79 5 0 7654 7732 67697799 67697721 1.370000e-22 119.0
80 TraesCS7B01G476300 chr3A 99.786 468 1 0 1856 2323 729535303 729534836 0.000000e+00 859.0
81 TraesCS7B01G476300 chr3A 96.212 132 4 1 277 408 722964323 722964453 1.700000e-51 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G476300 chr7B 732517499 732525268 7769 False 14349.000000 14349 100.00000 1 7770 1 chr7B.!!$F3 7769
1 TraesCS7B01G476300 chr7B 345993421 345994463 1042 False 1489.000000 1489 92.48300 6606 7648 1 chr7B.!!$F2 1042
2 TraesCS7B01G476300 chr7B 357809985 357811566 1581 False 770.666667 1395 94.87500 407 2488 3 chr7B.!!$F4 2081
3 TraesCS7B01G476300 chr7B 423436412 423443045 6633 True 554.400000 985 93.83600 407 6687 5 chr7B.!!$R2 6280
4 TraesCS7B01G476300 chr4A 284247379 284253850 6471 True 3662.666667 7925 96.40000 407 7353 3 chr4A.!!$R1 6946
5 TraesCS7B01G476300 chr2A 361483792 361490800 7008 False 3148.250000 5557 99.19900 407 7770 4 chr2A.!!$F2 7363
6 TraesCS7B01G476300 chr2A 300213638 300220227 6589 True 2778.000000 4597 97.16300 407 7732 4 chr2A.!!$R2 7325
7 TraesCS7B01G476300 chr7A 240668895 240678782 9887 True 2219.400000 4975 96.79160 406 7362 5 chr7A.!!$R1 6956
8 TraesCS7B01G476300 chr3D 20948246 20950134 1888 True 2868.000000 2868 94.19200 2866 4743 1 chr3D.!!$R1 1877
9 TraesCS7B01G476300 chr3B 568420980 568422951 1971 False 2846.000000 2846 92.90400 2794 4743 1 chr3B.!!$F1 1949
10 TraesCS7B01G476300 chr3B 279514333 279522102 7769 True 1218.000000 1986 94.24000 463 7732 5 chr3B.!!$R2 7269
11 TraesCS7B01G476300 chr2B 300323811 300329366 5555 False 1488.750000 2410 93.37525 1154 7723 4 chr2B.!!$F3 6569
12 TraesCS7B01G476300 chr5B 570950869 570955349 4480 False 1433.500000 2013 93.73450 1029 7729 2 chr5B.!!$F1 6700
13 TraesCS7B01G476300 chr5B 172630415 172631143 728 True 1099.000000 1099 94.37600 5650 6357 1 chr5B.!!$R1 707
14 TraesCS7B01G476300 chr6B 369655528 369663165 7637 True 1194.500000 1938 93.11825 537 7732 4 chr6B.!!$R1 7195
15 TraesCS7B01G476300 chr6B 476705875 476707751 1876 True 853.666667 857 99.85600 1857 2320 3 chr6B.!!$R2 463
16 TraesCS7B01G476300 chr4B 179434619 179435452 833 False 1319.000000 1319 95.20400 4820 5653 1 chr4B.!!$F1 833
17 TraesCS7B01G476300 chr4B 558549186 558550257 1071 True 555.500000 798 96.26350 881 2488 2 chr4B.!!$R1 1607
18 TraesCS7B01G476300 chr1B 156698608 156699440 832 True 1212.000000 1212 92.93400 4820 5653 1 chr1B.!!$R2 833
19 TraesCS7B01G476300 chr1B 192768908 192769715 807 True 1205.000000 1205 93.57200 4820 5628 1 chr1B.!!$R3 808
20 TraesCS7B01G476300 chr7D 1141557 1142429 872 True 1040.000000 1040 88.53000 2745 3615 1 chr7D.!!$R1 870
21 TraesCS7B01G476300 chr5A 165334715 165335438 723 True 1029.000000 1029 92.73000 5650 6357 1 chr5A.!!$R1 707
22 TraesCS7B01G476300 chr1A 244181035 244185100 4065 True 905.500000 1014 91.53850 406 1856 2 chr1A.!!$R3 1450
23 TraesCS7B01G476300 chr5D 175758978 175759697 719 False 1003.000000 1003 92.18100 5650 6357 1 chr5D.!!$F1 707
24 TraesCS7B01G476300 chr5D 236484783 236491401 6618 True 303.000000 303 81.25000 4300 4705 3 chr5D.!!$R3 405

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.394938 TCCGAGCCTAACAAAGCACA 59.605 50.000 0.00 0.00 0.00 4.57 F
145 146 1.003118 TCCGAGCCTAACAAAGCACAT 59.997 47.619 0.00 0.00 0.00 3.21 F
146 147 1.812571 CCGAGCCTAACAAAGCACATT 59.187 47.619 0.00 0.00 0.00 2.71 F
147 148 2.414559 CCGAGCCTAACAAAGCACATTG 60.415 50.000 0.00 0.00 36.37 2.82 F
148 149 2.483877 CGAGCCTAACAAAGCACATTGA 59.516 45.455 4.22 0.00 34.38 2.57 F
254 255 2.653726 ACAACAACAATCTGACTGGCA 58.346 42.857 0.00 0.00 0.00 4.92 F
2186 9534 1.477700 AGAAAGCTTTGTTGTGCTGCA 59.522 42.857 18.30 0.00 39.71 4.41 F
2296 9644 0.325860 ATAAGGAGTACCCGGGTGCA 60.326 55.000 38.49 21.38 40.87 4.57 F
2298 9646 0.325860 AAGGAGTACCCGGGTGCATA 60.326 55.000 38.49 17.40 40.87 3.14 F
2307 9655 0.468226 CCGGGTGCATAGGCTCTAAA 59.532 55.000 0.00 0.00 41.91 1.85 F
2308 9656 1.134220 CCGGGTGCATAGGCTCTAAAA 60.134 52.381 0.00 0.00 41.91 1.52 F
2309 9657 1.940613 CGGGTGCATAGGCTCTAAAAC 59.059 52.381 0.00 0.00 41.91 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1566 6950 0.979665 CTGCTCCTTCTCCCTGTCAA 59.020 55.000 0.00 0.00 0.00 3.18 R
2006 9354 7.795482 AGTTACAAAGTTATGTTGTACTGCA 57.205 32.000 0.00 0.00 40.30 4.41 R
2138 9486 8.598916 TGTAGAATGTGGGATAAAACTTACAGA 58.401 33.333 0.00 0.00 0.00 3.41 R
2139 9487 8.786826 TGTAGAATGTGGGATAAAACTTACAG 57.213 34.615 0.00 0.00 0.00 2.74 R
2147 9495 8.494433 AGCTTTCTATGTAGAATGTGGGATAAA 58.506 33.333 13.77 0.00 41.52 1.40 R
2253 9601 1.012086 CCACTCATTCCTGCATCACG 58.988 55.000 0.00 0.00 0.00 4.35 R
4761 19305 6.922957 ACAGCAACACATATTTTAACCAACAG 59.077 34.615 0.00 0.00 0.00 3.16 R
5866 22530 5.639506 CAGTACCGATAAATGCATAGAAGGG 59.360 44.000 0.00 1.82 0.00 3.95 R
6129 23242 2.664402 AACCAACCAGCAGTTCATCT 57.336 45.000 0.00 0.00 36.18 2.90 R
6358 25121 2.786854 CACTCGTTGTAGATCGACCAG 58.213 52.381 3.33 0.00 32.65 4.00 R
6425 25188 2.453521 ACACTGACGCCTCATTACCTA 58.546 47.619 0.00 0.00 0.00 3.08 R
7306 26077 8.579850 AGTATCTTTTGCAAGGACATATTCAA 57.420 30.769 0.00 0.00 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.544650 TCACATCCTTCTCTACTACTATCCC 58.455 44.000 0.00 0.00 0.00 3.85
25 26 6.333168 TCACATCCTTCTCTACTACTATCCCT 59.667 42.308 0.00 0.00 0.00 4.20
26 27 6.432783 CACATCCTTCTCTACTACTATCCCTG 59.567 46.154 0.00 0.00 0.00 4.45
27 28 5.586155 TCCTTCTCTACTACTATCCCTGG 57.414 47.826 0.00 0.00 0.00 4.45
28 29 4.083565 CCTTCTCTACTACTATCCCTGGC 58.916 52.174 0.00 0.00 0.00 4.85
29 30 3.810721 TCTCTACTACTATCCCTGGCC 57.189 52.381 0.00 0.00 0.00 5.36
30 31 2.379226 TCTCTACTACTATCCCTGGCCC 59.621 54.545 0.00 0.00 0.00 5.80
31 32 2.380590 CTCTACTACTATCCCTGGCCCT 59.619 54.545 0.00 0.00 0.00 5.19
32 33 3.592427 CTCTACTACTATCCCTGGCCCTA 59.408 52.174 0.00 0.00 0.00 3.53
33 34 3.992311 TCTACTACTATCCCTGGCCCTAA 59.008 47.826 0.00 0.00 0.00 2.69
34 35 3.719368 ACTACTATCCCTGGCCCTAAA 57.281 47.619 0.00 0.00 0.00 1.85
35 36 3.315596 ACTACTATCCCTGGCCCTAAAC 58.684 50.000 0.00 0.00 0.00 2.01
36 37 2.588925 ACTATCCCTGGCCCTAAACT 57.411 50.000 0.00 0.00 0.00 2.66
37 38 2.409570 ACTATCCCTGGCCCTAAACTC 58.590 52.381 0.00 0.00 0.00 3.01
38 39 2.293586 ACTATCCCTGGCCCTAAACTCA 60.294 50.000 0.00 0.00 0.00 3.41
39 40 1.681229 ATCCCTGGCCCTAAACTCAA 58.319 50.000 0.00 0.00 0.00 3.02
40 41 1.451449 TCCCTGGCCCTAAACTCAAA 58.549 50.000 0.00 0.00 0.00 2.69
41 42 1.783979 TCCCTGGCCCTAAACTCAAAA 59.216 47.619 0.00 0.00 0.00 2.44
42 43 2.171003 CCCTGGCCCTAAACTCAAAAG 58.829 52.381 0.00 0.00 0.00 2.27
43 44 1.546029 CCTGGCCCTAAACTCAAAAGC 59.454 52.381 0.00 0.00 0.00 3.51
44 45 2.238521 CTGGCCCTAAACTCAAAAGCA 58.761 47.619 0.00 0.00 0.00 3.91
45 46 2.627699 CTGGCCCTAAACTCAAAAGCAA 59.372 45.455 0.00 0.00 0.00 3.91
46 47 2.627699 TGGCCCTAAACTCAAAAGCAAG 59.372 45.455 0.00 0.00 0.00 4.01
47 48 2.610479 GGCCCTAAACTCAAAAGCAAGC 60.610 50.000 0.00 0.00 0.00 4.01
48 49 2.035832 GCCCTAAACTCAAAAGCAAGCA 59.964 45.455 0.00 0.00 0.00 3.91
49 50 3.858503 GCCCTAAACTCAAAAGCAAGCAG 60.859 47.826 0.00 0.00 0.00 4.24
50 51 3.569701 CCCTAAACTCAAAAGCAAGCAGA 59.430 43.478 0.00 0.00 0.00 4.26
51 52 4.037923 CCCTAAACTCAAAAGCAAGCAGAA 59.962 41.667 0.00 0.00 0.00 3.02
52 53 5.279156 CCCTAAACTCAAAAGCAAGCAGAAT 60.279 40.000 0.00 0.00 0.00 2.40
53 54 6.218746 CCTAAACTCAAAAGCAAGCAGAATT 58.781 36.000 0.00 0.00 0.00 2.17
54 55 6.703165 CCTAAACTCAAAAGCAAGCAGAATTT 59.297 34.615 0.00 0.00 0.00 1.82
55 56 7.867403 CCTAAACTCAAAAGCAAGCAGAATTTA 59.133 33.333 0.00 0.00 0.00 1.40
56 57 9.415544 CTAAACTCAAAAGCAAGCAGAATTTAT 57.584 29.630 0.00 0.00 0.00 1.40
57 58 8.667076 AAACTCAAAAGCAAGCAGAATTTATT 57.333 26.923 0.00 0.00 0.00 1.40
58 59 7.647907 ACTCAAAAGCAAGCAGAATTTATTG 57.352 32.000 0.00 0.00 0.00 1.90
59 60 7.436118 ACTCAAAAGCAAGCAGAATTTATTGA 58.564 30.769 0.00 0.00 0.00 2.57
60 61 8.092687 ACTCAAAAGCAAGCAGAATTTATTGAT 58.907 29.630 0.00 0.00 0.00 2.57
61 62 8.246908 TCAAAAGCAAGCAGAATTTATTGATG 57.753 30.769 0.00 0.00 0.00 3.07
62 63 8.089597 TCAAAAGCAAGCAGAATTTATTGATGA 58.910 29.630 0.00 0.00 0.00 2.92
63 64 8.380644 CAAAAGCAAGCAGAATTTATTGATGAG 58.619 33.333 0.00 0.00 0.00 2.90
64 65 6.770746 AGCAAGCAGAATTTATTGATGAGT 57.229 33.333 0.00 0.00 0.00 3.41
65 66 7.166691 AGCAAGCAGAATTTATTGATGAGTT 57.833 32.000 0.00 0.00 0.00 3.01
66 67 7.609056 AGCAAGCAGAATTTATTGATGAGTTT 58.391 30.769 0.00 0.00 0.00 2.66
67 68 8.092687 AGCAAGCAGAATTTATTGATGAGTTTT 58.907 29.630 0.00 0.00 0.00 2.43
68 69 8.378421 GCAAGCAGAATTTATTGATGAGTTTTC 58.622 33.333 0.00 0.00 0.00 2.29
69 70 9.414295 CAAGCAGAATTTATTGATGAGTTTTCA 57.586 29.630 0.00 0.00 37.81 2.69
125 126 7.938140 TTTTCTTCATTTAATCCCATCGACT 57.062 32.000 0.00 0.00 0.00 4.18
126 127 7.553881 TTTCTTCATTTAATCCCATCGACTC 57.446 36.000 0.00 0.00 0.00 3.36
127 128 5.611374 TCTTCATTTAATCCCATCGACTCC 58.389 41.667 0.00 0.00 0.00 3.85
128 129 3.990092 TCATTTAATCCCATCGACTCCG 58.010 45.455 0.00 0.00 37.07 4.63
137 138 4.728409 TCGACTCCGAGCCTAACA 57.272 55.556 0.00 0.00 40.30 2.41
138 139 2.951269 TCGACTCCGAGCCTAACAA 58.049 52.632 0.00 0.00 40.30 2.83
139 140 1.250328 TCGACTCCGAGCCTAACAAA 58.750 50.000 0.00 0.00 40.30 2.83
140 141 1.201647 TCGACTCCGAGCCTAACAAAG 59.798 52.381 0.00 0.00 40.30 2.77
141 142 1.360820 GACTCCGAGCCTAACAAAGC 58.639 55.000 0.00 0.00 0.00 3.51
142 143 0.685097 ACTCCGAGCCTAACAAAGCA 59.315 50.000 0.00 0.00 0.00 3.91
143 144 1.079503 CTCCGAGCCTAACAAAGCAC 58.920 55.000 0.00 0.00 0.00 4.40
144 145 0.394938 TCCGAGCCTAACAAAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
145 146 1.003118 TCCGAGCCTAACAAAGCACAT 59.997 47.619 0.00 0.00 0.00 3.21
146 147 1.812571 CCGAGCCTAACAAAGCACATT 59.187 47.619 0.00 0.00 0.00 2.71
147 148 2.414559 CCGAGCCTAACAAAGCACATTG 60.415 50.000 0.00 0.00 36.37 2.82
148 149 2.483877 CGAGCCTAACAAAGCACATTGA 59.516 45.455 4.22 0.00 34.38 2.57
149 150 3.425359 CGAGCCTAACAAAGCACATTGAG 60.425 47.826 4.22 0.00 34.38 3.02
150 151 3.490348 AGCCTAACAAAGCACATTGAGT 58.510 40.909 4.22 0.00 34.38 3.41
151 152 4.651778 AGCCTAACAAAGCACATTGAGTA 58.348 39.130 4.22 0.00 34.38 2.59
152 153 5.256474 AGCCTAACAAAGCACATTGAGTAT 58.744 37.500 4.22 0.00 34.38 2.12
153 154 5.711976 AGCCTAACAAAGCACATTGAGTATT 59.288 36.000 4.22 0.00 34.38 1.89
154 155 6.209391 AGCCTAACAAAGCACATTGAGTATTT 59.791 34.615 4.22 0.00 34.38 1.40
155 156 7.393234 AGCCTAACAAAGCACATTGAGTATTTA 59.607 33.333 4.22 0.00 34.38 1.40
156 157 8.190784 GCCTAACAAAGCACATTGAGTATTTAT 58.809 33.333 4.22 0.00 34.38 1.40
157 158 9.722056 CCTAACAAAGCACATTGAGTATTTATC 57.278 33.333 4.22 0.00 34.38 1.75
158 159 9.425893 CTAACAAAGCACATTGAGTATTTATCG 57.574 33.333 4.22 0.00 34.38 2.92
159 160 6.785191 ACAAAGCACATTGAGTATTTATCGG 58.215 36.000 4.22 0.00 34.38 4.18
160 161 6.597672 ACAAAGCACATTGAGTATTTATCGGA 59.402 34.615 4.22 0.00 34.38 4.55
161 162 6.604735 AAGCACATTGAGTATTTATCGGAC 57.395 37.500 0.00 0.00 0.00 4.79
162 163 5.918608 AGCACATTGAGTATTTATCGGACT 58.081 37.500 0.00 0.00 0.00 3.85
163 164 5.755375 AGCACATTGAGTATTTATCGGACTG 59.245 40.000 0.00 0.00 0.00 3.51
164 165 5.050091 GCACATTGAGTATTTATCGGACTGG 60.050 44.000 0.00 0.00 0.00 4.00
165 166 6.049149 CACATTGAGTATTTATCGGACTGGT 58.951 40.000 0.00 0.00 0.00 4.00
166 167 6.201044 CACATTGAGTATTTATCGGACTGGTC 59.799 42.308 0.00 0.00 0.00 4.02
167 168 5.925506 TTGAGTATTTATCGGACTGGTCA 57.074 39.130 3.10 0.00 0.00 4.02
168 169 5.925506 TGAGTATTTATCGGACTGGTCAA 57.074 39.130 3.10 0.00 0.00 3.18
169 170 6.479972 TGAGTATTTATCGGACTGGTCAAT 57.520 37.500 3.10 0.00 0.00 2.57
170 171 7.591421 TGAGTATTTATCGGACTGGTCAATA 57.409 36.000 3.10 0.00 0.00 1.90
171 172 8.014070 TGAGTATTTATCGGACTGGTCAATAA 57.986 34.615 3.10 4.06 0.00 1.40
172 173 8.479689 TGAGTATTTATCGGACTGGTCAATAAA 58.520 33.333 15.83 15.83 35.35 1.40
173 174 8.888579 AGTATTTATCGGACTGGTCAATAAAG 57.111 34.615 17.24 0.00 34.86 1.85
174 175 8.701895 AGTATTTATCGGACTGGTCAATAAAGA 58.298 33.333 17.24 13.39 34.86 2.52
175 176 8.979574 GTATTTATCGGACTGGTCAATAAAGAG 58.020 37.037 17.24 0.00 34.86 2.85
176 177 6.540438 TTATCGGACTGGTCAATAAAGAGT 57.460 37.500 3.10 0.00 0.00 3.24
177 178 4.188247 TCGGACTGGTCAATAAAGAGTG 57.812 45.455 3.10 0.00 0.00 3.51
178 179 3.576982 TCGGACTGGTCAATAAAGAGTGT 59.423 43.478 3.10 0.00 0.00 3.55
179 180 4.768448 TCGGACTGGTCAATAAAGAGTGTA 59.232 41.667 3.10 0.00 0.00 2.90
180 181 5.244402 TCGGACTGGTCAATAAAGAGTGTAA 59.756 40.000 3.10 0.00 0.00 2.41
181 182 5.577164 CGGACTGGTCAATAAAGAGTGTAAG 59.423 44.000 3.10 0.00 0.00 2.34
182 183 6.465084 GGACTGGTCAATAAAGAGTGTAAGT 58.535 40.000 3.10 0.00 0.00 2.24
183 184 6.590677 GGACTGGTCAATAAAGAGTGTAAGTC 59.409 42.308 3.10 0.00 36.21 3.01
184 185 7.062749 ACTGGTCAATAAAGAGTGTAAGTCA 57.937 36.000 0.00 0.00 39.29 3.41
185 186 7.506114 ACTGGTCAATAAAGAGTGTAAGTCAA 58.494 34.615 0.00 0.00 39.29 3.18
186 187 7.657761 ACTGGTCAATAAAGAGTGTAAGTCAAG 59.342 37.037 0.00 0.00 39.29 3.02
187 188 6.426937 TGGTCAATAAAGAGTGTAAGTCAAGC 59.573 38.462 0.00 0.00 39.29 4.01
188 189 6.426937 GGTCAATAAAGAGTGTAAGTCAAGCA 59.573 38.462 0.00 0.00 39.29 3.91
189 190 7.119846 GGTCAATAAAGAGTGTAAGTCAAGCAT 59.880 37.037 0.00 0.00 39.29 3.79
190 191 9.151471 GTCAATAAAGAGTGTAAGTCAAGCATA 57.849 33.333 0.00 0.00 39.29 3.14
191 192 9.371136 TCAATAAAGAGTGTAAGTCAAGCATAG 57.629 33.333 0.00 0.00 39.29 2.23
192 193 9.155975 CAATAAAGAGTGTAAGTCAAGCATAGT 57.844 33.333 0.00 0.00 39.29 2.12
193 194 8.709386 ATAAAGAGTGTAAGTCAAGCATAGTG 57.291 34.615 0.00 0.00 39.29 2.74
194 195 5.984695 AGAGTGTAAGTCAAGCATAGTGA 57.015 39.130 0.00 0.00 39.29 3.41
195 196 5.715070 AGAGTGTAAGTCAAGCATAGTGAC 58.285 41.667 0.00 0.00 44.75 3.67
203 204 5.401033 GTCAAGCATAGTGACTGCATTAG 57.599 43.478 0.00 0.00 41.80 1.73
204 205 5.111989 GTCAAGCATAGTGACTGCATTAGA 58.888 41.667 0.00 0.00 41.80 2.10
205 206 5.582269 GTCAAGCATAGTGACTGCATTAGAA 59.418 40.000 0.00 0.00 41.80 2.10
206 207 6.092670 GTCAAGCATAGTGACTGCATTAGAAA 59.907 38.462 0.00 0.00 41.80 2.52
207 208 6.654582 TCAAGCATAGTGACTGCATTAGAAAA 59.345 34.615 0.00 0.00 42.15 2.29
208 209 7.337689 TCAAGCATAGTGACTGCATTAGAAAAT 59.662 33.333 0.00 0.00 42.15 1.82
209 210 8.615211 CAAGCATAGTGACTGCATTAGAAAATA 58.385 33.333 0.00 0.00 42.15 1.40
210 211 8.915057 AGCATAGTGACTGCATTAGAAAATAT 57.085 30.769 0.00 0.00 42.15 1.28
216 217 9.988815 AGTGACTGCATTAGAAAATATAGGTAG 57.011 33.333 0.00 0.00 0.00 3.18
217 218 8.713271 GTGACTGCATTAGAAAATATAGGTAGC 58.287 37.037 0.00 0.00 0.00 3.58
218 219 8.428852 TGACTGCATTAGAAAATATAGGTAGCA 58.571 33.333 0.00 0.00 0.00 3.49
220 221 7.389053 ACTGCATTAGAAAATATAGGTAGCAGC 59.611 37.037 0.00 0.00 46.01 5.25
221 222 7.223584 TGCATTAGAAAATATAGGTAGCAGCA 58.776 34.615 0.00 0.00 0.00 4.41
222 223 7.388776 TGCATTAGAAAATATAGGTAGCAGCAG 59.611 37.037 0.00 0.00 0.00 4.24
223 224 7.604164 GCATTAGAAAATATAGGTAGCAGCAGA 59.396 37.037 0.00 0.00 0.00 4.26
224 225 8.930760 CATTAGAAAATATAGGTAGCAGCAGAC 58.069 37.037 0.00 0.00 0.00 3.51
225 226 6.485830 AGAAAATATAGGTAGCAGCAGACA 57.514 37.500 0.00 0.00 0.00 3.41
226 227 7.072263 AGAAAATATAGGTAGCAGCAGACAT 57.928 36.000 0.00 0.00 0.00 3.06
227 228 6.933521 AGAAAATATAGGTAGCAGCAGACATG 59.066 38.462 0.00 0.00 0.00 3.21
228 229 6.425210 AAATATAGGTAGCAGCAGACATGA 57.575 37.500 0.00 0.00 0.00 3.07
229 230 6.617782 AATATAGGTAGCAGCAGACATGAT 57.382 37.500 0.00 0.00 0.00 2.45
230 231 7.724490 AATATAGGTAGCAGCAGACATGATA 57.276 36.000 0.00 0.00 0.00 2.15
231 232 7.724490 ATATAGGTAGCAGCAGACATGATAA 57.276 36.000 0.00 0.00 0.00 1.75
232 233 4.760530 AGGTAGCAGCAGACATGATAAA 57.239 40.909 0.00 0.00 0.00 1.40
233 234 5.102953 AGGTAGCAGCAGACATGATAAAA 57.897 39.130 0.00 0.00 0.00 1.52
234 235 5.500234 AGGTAGCAGCAGACATGATAAAAA 58.500 37.500 0.00 0.00 0.00 1.94
235 236 5.355350 AGGTAGCAGCAGACATGATAAAAAC 59.645 40.000 0.00 0.00 0.00 2.43
236 237 5.123820 GGTAGCAGCAGACATGATAAAAACA 59.876 40.000 0.00 0.00 0.00 2.83
237 238 5.710513 AGCAGCAGACATGATAAAAACAA 57.289 34.783 0.00 0.00 0.00 2.83
238 239 5.464168 AGCAGCAGACATGATAAAAACAAC 58.536 37.500 0.00 0.00 0.00 3.32
239 240 5.009911 AGCAGCAGACATGATAAAAACAACA 59.990 36.000 0.00 0.00 0.00 3.33
240 241 5.691305 GCAGCAGACATGATAAAAACAACAA 59.309 36.000 0.00 0.00 0.00 2.83
241 242 6.346040 GCAGCAGACATGATAAAAACAACAAC 60.346 38.462 0.00 0.00 0.00 3.32
242 243 6.696583 CAGCAGACATGATAAAAACAACAACA 59.303 34.615 0.00 0.00 0.00 3.33
243 244 7.222417 CAGCAGACATGATAAAAACAACAACAA 59.778 33.333 0.00 0.00 0.00 2.83
244 245 7.927629 AGCAGACATGATAAAAACAACAACAAT 59.072 29.630 0.00 0.00 0.00 2.71
245 246 8.216453 GCAGACATGATAAAAACAACAACAATC 58.784 33.333 0.00 0.00 0.00 2.67
246 247 9.467258 CAGACATGATAAAAACAACAACAATCT 57.533 29.630 0.00 0.00 0.00 2.40
247 248 9.467258 AGACATGATAAAAACAACAACAATCTG 57.533 29.630 0.00 0.00 0.00 2.90
248 249 9.462174 GACATGATAAAAACAACAACAATCTGA 57.538 29.630 0.00 0.00 0.00 3.27
249 250 9.248291 ACATGATAAAAACAACAACAATCTGAC 57.752 29.630 0.00 0.00 0.00 3.51
250 251 9.467258 CATGATAAAAACAACAACAATCTGACT 57.533 29.630 0.00 0.00 0.00 3.41
251 252 8.854979 TGATAAAAACAACAACAATCTGACTG 57.145 30.769 0.00 0.00 0.00 3.51
252 253 7.920151 TGATAAAAACAACAACAATCTGACTGG 59.080 33.333 0.00 0.00 0.00 4.00
253 254 3.715628 AACAACAACAATCTGACTGGC 57.284 42.857 0.00 0.00 0.00 4.85
254 255 2.653726 ACAACAACAATCTGACTGGCA 58.346 42.857 0.00 0.00 0.00 4.92
255 256 3.225104 ACAACAACAATCTGACTGGCAT 58.775 40.909 0.00 0.00 0.00 4.40
256 257 3.254166 ACAACAACAATCTGACTGGCATC 59.746 43.478 0.00 0.00 0.00 3.91
257 258 3.430042 ACAACAATCTGACTGGCATCT 57.570 42.857 0.00 0.00 0.00 2.90
258 259 3.759581 ACAACAATCTGACTGGCATCTT 58.240 40.909 0.00 0.00 0.00 2.40
259 260 4.147321 ACAACAATCTGACTGGCATCTTT 58.853 39.130 0.00 0.00 0.00 2.52
260 261 5.316167 ACAACAATCTGACTGGCATCTTTA 58.684 37.500 0.00 0.00 0.00 1.85
261 262 5.769662 ACAACAATCTGACTGGCATCTTTAA 59.230 36.000 0.00 0.00 0.00 1.52
262 263 5.886960 ACAATCTGACTGGCATCTTTAAC 57.113 39.130 0.00 0.00 0.00 2.01
263 264 5.316167 ACAATCTGACTGGCATCTTTAACA 58.684 37.500 0.00 0.00 0.00 2.41
264 265 5.948162 ACAATCTGACTGGCATCTTTAACAT 59.052 36.000 0.00 0.00 0.00 2.71
265 266 7.112122 ACAATCTGACTGGCATCTTTAACATA 58.888 34.615 0.00 0.00 0.00 2.29
266 267 7.281774 ACAATCTGACTGGCATCTTTAACATAG 59.718 37.037 0.00 0.00 0.00 2.23
267 268 6.544928 TCTGACTGGCATCTTTAACATAGA 57.455 37.500 0.00 0.00 0.00 1.98
268 269 6.946340 TCTGACTGGCATCTTTAACATAGAA 58.054 36.000 0.00 0.00 0.00 2.10
269 270 7.394016 TCTGACTGGCATCTTTAACATAGAAA 58.606 34.615 0.00 0.00 0.00 2.52
270 271 7.882791 TCTGACTGGCATCTTTAACATAGAAAA 59.117 33.333 0.00 0.00 0.00 2.29
271 272 8.044060 TGACTGGCATCTTTAACATAGAAAAG 57.956 34.615 0.00 0.00 34.65 2.27
272 273 7.882791 TGACTGGCATCTTTAACATAGAAAAGA 59.117 33.333 0.46 0.46 43.72 2.52
273 274 8.045176 ACTGGCATCTTTAACATAGAAAAGAC 57.955 34.615 0.00 0.00 42.72 3.01
274 275 7.665559 ACTGGCATCTTTAACATAGAAAAGACA 59.334 33.333 0.00 0.00 42.72 3.41
275 276 7.816640 TGGCATCTTTAACATAGAAAAGACAC 58.183 34.615 0.00 0.00 42.72 3.67
276 277 7.446931 TGGCATCTTTAACATAGAAAAGACACA 59.553 33.333 0.00 0.00 42.72 3.72
277 278 8.462016 GGCATCTTTAACATAGAAAAGACACAT 58.538 33.333 0.00 0.00 42.72 3.21
290 291 8.994429 AGAAAAGACACATAGATAACAGTCAG 57.006 34.615 0.00 0.00 0.00 3.51
291 292 8.037758 AGAAAAGACACATAGATAACAGTCAGG 58.962 37.037 0.00 0.00 0.00 3.86
292 293 6.859112 AAGACACATAGATAACAGTCAGGT 57.141 37.500 0.00 0.00 0.00 4.00
293 294 6.859112 AGACACATAGATAACAGTCAGGTT 57.141 37.500 0.00 0.00 34.81 3.50
294 295 7.956328 AGACACATAGATAACAGTCAGGTTA 57.044 36.000 0.00 0.00 37.62 2.85
295 296 8.001881 AGACACATAGATAACAGTCAGGTTAG 57.998 38.462 0.00 0.00 36.74 2.34
296 297 7.616150 AGACACATAGATAACAGTCAGGTTAGT 59.384 37.037 0.00 0.00 36.74 2.24
297 298 8.135382 ACACATAGATAACAGTCAGGTTAGTT 57.865 34.615 0.00 0.00 36.74 2.24
298 299 8.594550 ACACATAGATAACAGTCAGGTTAGTTT 58.405 33.333 0.00 0.00 36.74 2.66
328 329 9.657121 GATAAAAGATTGAAGCTACATTACAGC 57.343 33.333 0.00 0.00 39.41 4.40
329 330 6.442513 AAAGATTGAAGCTACATTACAGCC 57.557 37.500 0.00 0.00 39.99 4.85
330 331 5.102953 AGATTGAAGCTACATTACAGCCA 57.897 39.130 0.00 0.00 39.99 4.75
331 332 5.500234 AGATTGAAGCTACATTACAGCCAA 58.500 37.500 0.00 0.00 39.99 4.52
332 333 5.355350 AGATTGAAGCTACATTACAGCCAAC 59.645 40.000 0.00 0.00 39.99 3.77
333 334 4.014569 TGAAGCTACATTACAGCCAACA 57.985 40.909 0.00 0.00 39.99 3.33
334 335 4.588899 TGAAGCTACATTACAGCCAACAT 58.411 39.130 0.00 0.00 39.99 2.71
335 336 5.009631 TGAAGCTACATTACAGCCAACATT 58.990 37.500 0.00 0.00 39.99 2.71
336 337 5.123820 TGAAGCTACATTACAGCCAACATTC 59.876 40.000 0.00 0.00 39.99 2.67
337 338 4.588899 AGCTACATTACAGCCAACATTCA 58.411 39.130 0.00 0.00 39.99 2.57
338 339 4.396166 AGCTACATTACAGCCAACATTCAC 59.604 41.667 0.00 0.00 39.99 3.18
339 340 4.438744 GCTACATTACAGCCAACATTCACC 60.439 45.833 0.00 0.00 32.68 4.02
340 341 3.495331 ACATTACAGCCAACATTCACCA 58.505 40.909 0.00 0.00 0.00 4.17
341 342 3.894427 ACATTACAGCCAACATTCACCAA 59.106 39.130 0.00 0.00 0.00 3.67
342 343 4.527816 ACATTACAGCCAACATTCACCAAT 59.472 37.500 0.00 0.00 0.00 3.16
343 344 5.011943 ACATTACAGCCAACATTCACCAATT 59.988 36.000 0.00 0.00 0.00 2.32
344 345 5.543507 TTACAGCCAACATTCACCAATTT 57.456 34.783 0.00 0.00 0.00 1.82
345 346 6.656632 TTACAGCCAACATTCACCAATTTA 57.343 33.333 0.00 0.00 0.00 1.40
346 347 5.743636 ACAGCCAACATTCACCAATTTAT 57.256 34.783 0.00 0.00 0.00 1.40
347 348 6.112927 ACAGCCAACATTCACCAATTTATT 57.887 33.333 0.00 0.00 0.00 1.40
348 349 7.238486 ACAGCCAACATTCACCAATTTATTA 57.762 32.000 0.00 0.00 0.00 0.98
349 350 7.850193 ACAGCCAACATTCACCAATTTATTAT 58.150 30.769 0.00 0.00 0.00 1.28
350 351 8.320617 ACAGCCAACATTCACCAATTTATTATT 58.679 29.630 0.00 0.00 0.00 1.40
351 352 9.814899 CAGCCAACATTCACCAATTTATTATTA 57.185 29.630 0.00 0.00 0.00 0.98
1306 6652 3.679917 GCGATGAAATCCCTCTCTTGTGA 60.680 47.826 0.00 0.00 41.39 3.58
2006 9354 8.831715 AAAACATGTCTTGAACTTCAAACTTT 57.168 26.923 0.00 2.89 35.73 2.66
2007 9355 7.816945 AACATGTCTTGAACTTCAAACTTTG 57.183 32.000 0.00 10.13 35.73 2.77
2008 9356 5.807011 ACATGTCTTGAACTTCAAACTTTGC 59.193 36.000 5.72 0.00 35.73 3.68
2009 9357 5.384063 TGTCTTGAACTTCAAACTTTGCA 57.616 34.783 5.72 0.00 35.73 4.08
2010 9358 5.401550 TGTCTTGAACTTCAAACTTTGCAG 58.598 37.500 5.72 0.17 35.73 4.41
2011 9359 5.048083 TGTCTTGAACTTCAAACTTTGCAGT 60.048 36.000 5.72 1.39 38.79 4.40
2012 9360 6.150307 TGTCTTGAACTTCAAACTTTGCAGTA 59.850 34.615 7.16 0.00 36.12 2.74
2013 9361 6.469275 GTCTTGAACTTCAAACTTTGCAGTAC 59.531 38.462 7.16 0.00 36.12 2.73
2014 9362 5.888691 TGAACTTCAAACTTTGCAGTACA 57.111 34.783 7.16 0.00 36.12 2.90
2015 9363 6.260870 TGAACTTCAAACTTTGCAGTACAA 57.739 33.333 7.16 0.00 36.12 2.41
2016 9364 6.090129 TGAACTTCAAACTTTGCAGTACAAC 58.910 36.000 7.16 2.19 36.12 3.32
2017 9365 5.637006 ACTTCAAACTTTGCAGTACAACA 57.363 34.783 5.14 0.00 35.39 3.33
2018 9366 6.207691 ACTTCAAACTTTGCAGTACAACAT 57.792 33.333 5.14 0.00 35.39 2.71
2019 9367 7.328277 ACTTCAAACTTTGCAGTACAACATA 57.672 32.000 5.14 0.00 35.39 2.29
2020 9368 7.767261 ACTTCAAACTTTGCAGTACAACATAA 58.233 30.769 5.14 0.00 35.39 1.90
2021 9369 7.700656 ACTTCAAACTTTGCAGTACAACATAAC 59.299 33.333 5.14 0.00 35.39 1.89
2022 9370 7.328277 TCAAACTTTGCAGTACAACATAACT 57.672 32.000 0.00 0.00 38.23 2.24
2023 9371 7.767261 TCAAACTTTGCAGTACAACATAACTT 58.233 30.769 0.00 0.00 38.23 2.66
2024 9372 8.247562 TCAAACTTTGCAGTACAACATAACTTT 58.752 29.630 0.00 0.00 38.23 2.66
2025 9373 7.985634 AACTTTGCAGTACAACATAACTTTG 57.014 32.000 0.00 0.00 38.23 2.77
2026 9374 7.095695 ACTTTGCAGTACAACATAACTTTGT 57.904 32.000 0.00 0.00 38.23 2.83
2027 9375 8.215926 ACTTTGCAGTACAACATAACTTTGTA 57.784 30.769 0.00 0.00 38.23 2.41
2028 9376 8.679100 ACTTTGCAGTACAACATAACTTTGTAA 58.321 29.630 0.00 0.00 40.30 2.41
2029 9377 8.844441 TTTGCAGTACAACATAACTTTGTAAC 57.156 30.769 0.00 0.00 40.30 2.50
2030 9378 7.795482 TGCAGTACAACATAACTTTGTAACT 57.205 32.000 0.00 0.00 40.30 2.24
2031 9379 8.890124 TGCAGTACAACATAACTTTGTAACTA 57.110 30.769 0.00 0.00 40.30 2.24
2032 9380 8.984764 TGCAGTACAACATAACTTTGTAACTAG 58.015 33.333 0.00 0.00 40.30 2.57
2033 9381 9.199982 GCAGTACAACATAACTTTGTAACTAGA 57.800 33.333 0.00 0.00 40.30 2.43
2161 9509 9.533831 AAATCTGTAAGTTTTATCCCACATTCT 57.466 29.630 0.00 0.00 34.30 2.40
2163 9511 9.614792 ATCTGTAAGTTTTATCCCACATTCTAC 57.385 33.333 0.00 0.00 33.76 2.59
2164 9512 8.598916 TCTGTAAGTTTTATCCCACATTCTACA 58.401 33.333 0.00 0.00 33.76 2.74
2165 9513 9.396022 CTGTAAGTTTTATCCCACATTCTACAT 57.604 33.333 0.00 0.00 0.00 2.29
2172 9520 8.677148 TTTATCCCACATTCTACATAGAAAGC 57.323 34.615 5.48 0.00 44.63 3.51
2173 9521 5.957771 TCCCACATTCTACATAGAAAGCT 57.042 39.130 5.48 0.00 44.63 3.74
2174 9522 6.313519 TCCCACATTCTACATAGAAAGCTT 57.686 37.500 5.48 0.00 44.63 3.74
2175 9523 6.721318 TCCCACATTCTACATAGAAAGCTTT 58.279 36.000 12.53 12.53 44.63 3.51
2176 9524 6.599244 TCCCACATTCTACATAGAAAGCTTTG 59.401 38.462 18.30 5.25 44.63 2.77
2177 9525 6.375455 CCCACATTCTACATAGAAAGCTTTGT 59.625 38.462 18.30 15.90 44.63 2.83
2178 9526 7.094205 CCCACATTCTACATAGAAAGCTTTGTT 60.094 37.037 18.30 7.23 44.63 2.83
2179 9527 7.752239 CCACATTCTACATAGAAAGCTTTGTTG 59.248 37.037 18.30 15.03 44.63 3.33
2180 9528 8.292448 CACATTCTACATAGAAAGCTTTGTTGT 58.708 33.333 18.30 19.36 44.63 3.32
2181 9529 8.292448 ACATTCTACATAGAAAGCTTTGTTGTG 58.708 33.333 18.30 16.43 44.63 3.33
2182 9530 6.241207 TCTACATAGAAAGCTTTGTTGTGC 57.759 37.500 18.30 0.25 37.47 4.57
2183 9531 5.997746 TCTACATAGAAAGCTTTGTTGTGCT 59.002 36.000 18.30 8.71 41.82 4.40
2184 9532 4.863491 ACATAGAAAGCTTTGTTGTGCTG 58.137 39.130 18.30 8.38 39.71 4.41
2185 9533 2.214387 AGAAAGCTTTGTTGTGCTGC 57.786 45.000 18.30 0.00 39.71 5.25
2186 9534 1.477700 AGAAAGCTTTGTTGTGCTGCA 59.522 42.857 18.30 0.00 39.71 4.41
2187 9535 2.094078 AGAAAGCTTTGTTGTGCTGCAA 60.094 40.909 18.30 0.00 39.71 4.08
2188 9536 2.383368 AAGCTTTGTTGTGCTGCAAA 57.617 40.000 2.77 0.00 39.71 3.68
2192 9540 3.644805 CTTTGTTGTGCTGCAAAGTTG 57.355 42.857 2.77 0.00 43.69 3.16
2193 9541 3.252400 CTTTGTTGTGCTGCAAAGTTGA 58.748 40.909 2.77 0.00 43.69 3.18
2194 9542 3.309961 TTGTTGTGCTGCAAAGTTGAA 57.690 38.095 2.77 0.00 39.03 2.69
2195 9543 2.878580 TGTTGTGCTGCAAAGTTGAAG 58.121 42.857 2.77 0.00 39.03 3.02
2196 9544 2.230992 TGTTGTGCTGCAAAGTTGAAGT 59.769 40.909 2.77 0.00 39.03 3.01
2197 9545 3.441922 TGTTGTGCTGCAAAGTTGAAGTA 59.558 39.130 2.77 0.00 39.03 2.24
2198 9546 3.691049 TGTGCTGCAAAGTTGAAGTAC 57.309 42.857 12.06 12.06 46.14 2.73
2199 9547 3.691049 GTGCTGCAAAGTTGAAGTACA 57.309 42.857 13.61 0.00 45.51 2.90
2200 9548 4.027572 GTGCTGCAAAGTTGAAGTACAA 57.972 40.909 13.61 0.00 45.51 2.41
2201 9549 4.420168 GTGCTGCAAAGTTGAAGTACAAA 58.580 39.130 13.61 0.00 45.51 2.83
2202 9550 4.862018 GTGCTGCAAAGTTGAAGTACAAAA 59.138 37.500 13.61 0.00 45.51 2.44
2203 9551 5.519927 GTGCTGCAAAGTTGAAGTACAAAAT 59.480 36.000 13.61 0.00 45.51 1.82
2204 9552 6.695278 GTGCTGCAAAGTTGAAGTACAAAATA 59.305 34.615 13.61 0.00 45.51 1.40
2205 9553 6.695278 TGCTGCAAAGTTGAAGTACAAAATAC 59.305 34.615 0.00 0.00 40.36 1.89
2206 9554 6.695278 GCTGCAAAGTTGAAGTACAAAATACA 59.305 34.615 1.02 0.00 40.36 2.29
2207 9555 7.382218 GCTGCAAAGTTGAAGTACAAAATACAT 59.618 33.333 1.02 0.00 40.36 2.29
2208 9556 8.572828 TGCAAAGTTGAAGTACAAAATACATG 57.427 30.769 0.00 0.00 40.36 3.21
2209 9557 8.194104 TGCAAAGTTGAAGTACAAAATACATGT 58.806 29.630 2.69 2.69 40.36 3.21
2210 9558 9.030301 GCAAAGTTGAAGTACAAAATACATGTT 57.970 29.630 2.30 0.00 40.36 2.71
2254 9602 7.725610 AAGAGAAAATTATTTGCACGAATCG 57.274 32.000 0.00 0.00 0.00 3.34
2255 9603 6.842163 AGAGAAAATTATTTGCACGAATCGT 58.158 32.000 0.96 0.96 42.36 3.73
2265 9613 3.832704 ACGAATCGTGATGCAGGAA 57.167 47.368 7.77 0.00 39.18 3.36
2266 9614 2.315925 ACGAATCGTGATGCAGGAAT 57.684 45.000 7.77 0.00 39.18 3.01
2267 9615 1.935873 ACGAATCGTGATGCAGGAATG 59.064 47.619 7.77 0.00 39.18 2.67
2268 9616 2.204237 CGAATCGTGATGCAGGAATGA 58.796 47.619 0.00 0.00 32.06 2.57
2269 9617 2.220363 CGAATCGTGATGCAGGAATGAG 59.780 50.000 0.00 0.00 32.06 2.90
2270 9618 2.996249 ATCGTGATGCAGGAATGAGT 57.004 45.000 0.00 0.00 32.06 3.41
2271 9619 2.014335 TCGTGATGCAGGAATGAGTG 57.986 50.000 0.00 0.00 0.00 3.51
2272 9620 1.012086 CGTGATGCAGGAATGAGTGG 58.988 55.000 0.00 0.00 0.00 4.00
2273 9621 1.676916 CGTGATGCAGGAATGAGTGGT 60.677 52.381 0.00 0.00 0.00 4.16
2274 9622 2.440409 GTGATGCAGGAATGAGTGGTT 58.560 47.619 0.00 0.00 0.00 3.67
2275 9623 2.163010 GTGATGCAGGAATGAGTGGTTG 59.837 50.000 0.00 0.00 0.00 3.77
2276 9624 1.747355 GATGCAGGAATGAGTGGTTGG 59.253 52.381 0.00 0.00 0.00 3.77
2277 9625 0.770499 TGCAGGAATGAGTGGTTGGA 59.230 50.000 0.00 0.00 0.00 3.53
2278 9626 1.355381 TGCAGGAATGAGTGGTTGGAT 59.645 47.619 0.00 0.00 0.00 3.41
2279 9627 2.575735 TGCAGGAATGAGTGGTTGGATA 59.424 45.455 0.00 0.00 0.00 2.59
2280 9628 3.010027 TGCAGGAATGAGTGGTTGGATAA 59.990 43.478 0.00 0.00 0.00 1.75
2281 9629 3.629398 GCAGGAATGAGTGGTTGGATAAG 59.371 47.826 0.00 0.00 0.00 1.73
2282 9630 4.202441 CAGGAATGAGTGGTTGGATAAGG 58.798 47.826 0.00 0.00 0.00 2.69
2283 9631 4.080356 CAGGAATGAGTGGTTGGATAAGGA 60.080 45.833 0.00 0.00 0.00 3.36
2284 9632 4.164988 AGGAATGAGTGGTTGGATAAGGAG 59.835 45.833 0.00 0.00 0.00 3.69
2285 9633 4.080299 GGAATGAGTGGTTGGATAAGGAGT 60.080 45.833 0.00 0.00 0.00 3.85
2286 9634 5.130477 GGAATGAGTGGTTGGATAAGGAGTA 59.870 44.000 0.00 0.00 0.00 2.59
2287 9635 5.615925 ATGAGTGGTTGGATAAGGAGTAC 57.384 43.478 0.00 0.00 0.00 2.73
2288 9636 3.773119 TGAGTGGTTGGATAAGGAGTACC 59.227 47.826 0.00 0.00 0.00 3.34
2289 9637 3.113043 AGTGGTTGGATAAGGAGTACCC 58.887 50.000 0.00 0.00 36.73 3.69
2290 9638 2.112998 TGGTTGGATAAGGAGTACCCG 58.887 52.381 0.00 0.00 40.87 5.28
2291 9639 1.415289 GGTTGGATAAGGAGTACCCGG 59.585 57.143 0.00 0.00 40.87 5.73
2292 9640 1.415289 GTTGGATAAGGAGTACCCGGG 59.585 57.143 22.25 22.25 40.87 5.73
2293 9641 0.638292 TGGATAAGGAGTACCCGGGT 59.362 55.000 32.66 32.66 40.87 5.28
2294 9642 1.046204 GGATAAGGAGTACCCGGGTG 58.954 60.000 36.97 6.22 40.87 4.61
2295 9643 0.391966 GATAAGGAGTACCCGGGTGC 59.608 60.000 36.97 34.59 40.87 5.01
2296 9644 0.325860 ATAAGGAGTACCCGGGTGCA 60.326 55.000 38.49 21.38 40.87 4.57
2297 9645 0.325860 TAAGGAGTACCCGGGTGCAT 60.326 55.000 38.49 25.22 40.87 3.96
2298 9646 0.325860 AAGGAGTACCCGGGTGCATA 60.326 55.000 38.49 17.40 40.87 3.14
2299 9647 0.759436 AGGAGTACCCGGGTGCATAG 60.759 60.000 38.49 7.31 40.87 2.23
2300 9648 1.746517 GAGTACCCGGGTGCATAGG 59.253 63.158 38.49 6.51 33.14 2.57
2301 9649 2.110420 GTACCCGGGTGCATAGGC 59.890 66.667 36.97 12.77 41.68 3.93
2302 9650 2.041301 TACCCGGGTGCATAGGCT 60.041 61.111 36.97 8.21 41.91 4.58
2303 9651 2.138179 TACCCGGGTGCATAGGCTC 61.138 63.158 36.97 0.00 41.91 4.70
2304 9652 2.599139 TACCCGGGTGCATAGGCTCT 62.599 60.000 36.97 6.74 41.91 4.09
2305 9653 1.837051 CCCGGGTGCATAGGCTCTA 60.837 63.158 14.18 0.00 41.91 2.43
2306 9654 1.407656 CCCGGGTGCATAGGCTCTAA 61.408 60.000 14.18 0.00 41.91 2.10
2307 9655 0.468226 CCGGGTGCATAGGCTCTAAA 59.532 55.000 0.00 0.00 41.91 1.85
2308 9656 1.134220 CCGGGTGCATAGGCTCTAAAA 60.134 52.381 0.00 0.00 41.91 1.52
2309 9657 1.940613 CGGGTGCATAGGCTCTAAAAC 59.059 52.381 0.00 0.00 41.91 2.43
2310 9658 2.679639 CGGGTGCATAGGCTCTAAAACA 60.680 50.000 0.00 0.00 41.91 2.83
2311 9659 3.555966 GGGTGCATAGGCTCTAAAACAT 58.444 45.455 0.00 0.00 41.91 2.71
2312 9660 3.316308 GGGTGCATAGGCTCTAAAACATG 59.684 47.826 0.00 0.00 41.91 3.21
2313 9661 3.947834 GGTGCATAGGCTCTAAAACATGT 59.052 43.478 0.00 0.00 41.91 3.21
2314 9662 4.399303 GGTGCATAGGCTCTAAAACATGTT 59.601 41.667 4.92 4.92 41.91 2.71
2315 9663 5.105756 GGTGCATAGGCTCTAAAACATGTTT 60.106 40.000 18.13 18.13 41.91 2.83
2316 9664 6.389906 GTGCATAGGCTCTAAAACATGTTTT 58.610 36.000 32.63 32.63 42.11 2.43
2317 9665 6.528072 GTGCATAGGCTCTAAAACATGTTTTC 59.472 38.462 33.71 21.47 40.89 2.29
2318 9666 5.739161 GCATAGGCTCTAAAACATGTTTTCG 59.261 40.000 33.71 28.00 39.12 3.46
2319 9667 6.622896 GCATAGGCTCTAAAACATGTTTTCGT 60.623 38.462 33.71 23.41 39.12 3.85
2320 9668 5.767816 AGGCTCTAAAACATGTTTTCGTT 57.232 34.783 33.71 17.24 41.39 3.85
2321 9669 5.758924 AGGCTCTAAAACATGTTTTCGTTC 58.241 37.500 33.71 22.53 41.39 3.95
2322 9670 4.915667 GGCTCTAAAACATGTTTTCGTTCC 59.084 41.667 33.71 25.93 41.39 3.62
2323 9671 5.506649 GGCTCTAAAACATGTTTTCGTTCCA 60.507 40.000 33.71 17.95 41.39 3.53
2324 9672 5.974751 GCTCTAAAACATGTTTTCGTTCCAA 59.025 36.000 33.71 17.32 41.39 3.53
2325 9673 6.142320 GCTCTAAAACATGTTTTCGTTCCAAG 59.858 38.462 33.71 24.18 41.39 3.61
2326 9674 7.323049 TCTAAAACATGTTTTCGTTCCAAGA 57.677 32.000 33.71 25.69 41.39 3.02
3250 11387 8.711457 AGTTAATTGTTTGTGATGCTTATTTGC 58.289 29.630 0.00 0.00 0.00 3.68
4761 19305 5.068723 TCCTATACGGGTTCTTGTTGATCTC 59.931 44.000 0.00 0.00 0.00 2.75
5866 22530 7.587757 CGGCTCAAAGTGTAAGATATTTTATGC 59.412 37.037 0.00 0.00 0.00 3.14
5885 22754 3.411446 TGCCCTTCTATGCATTTATCGG 58.589 45.455 3.54 0.66 31.31 4.18
6425 25188 6.176896 GTGAGCTCCCTCTTTTATTCTTCTT 58.823 40.000 12.15 0.00 38.93 2.52
7306 26077 4.755266 ATGGGCTTTCTACAACGAGTAT 57.245 40.909 0.00 0.00 30.93 2.12
7455 26244 3.555168 GCTGAGGAACCGAGAAAGAAAGA 60.555 47.826 0.00 0.00 0.00 2.52
7610 26404 5.994668 TCTGTATGTGCACAACAAAGACATA 59.005 36.000 25.72 5.20 43.61 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.333168 AGGGATAGTAGTAGAGAAGGATGTGA 59.667 42.308 0.00 0.00 0.00 3.58
1 2 6.432783 CAGGGATAGTAGTAGAGAAGGATGTG 59.567 46.154 0.00 0.00 0.00 3.21
2 3 6.468066 CCAGGGATAGTAGTAGAGAAGGATGT 60.468 46.154 0.00 0.00 0.00 3.06
3 4 5.949354 CCAGGGATAGTAGTAGAGAAGGATG 59.051 48.000 0.00 0.00 0.00 3.51
4 5 5.517655 GCCAGGGATAGTAGTAGAGAAGGAT 60.518 48.000 0.00 0.00 0.00 3.24
5 6 4.202588 GCCAGGGATAGTAGTAGAGAAGGA 60.203 50.000 0.00 0.00 0.00 3.36
6 7 4.083565 GCCAGGGATAGTAGTAGAGAAGG 58.916 52.174 0.00 0.00 0.00 3.46
7 8 4.083565 GGCCAGGGATAGTAGTAGAGAAG 58.916 52.174 0.00 0.00 0.00 2.85
8 9 3.181420 GGGCCAGGGATAGTAGTAGAGAA 60.181 52.174 4.39 0.00 0.00 2.87
9 10 2.379226 GGGCCAGGGATAGTAGTAGAGA 59.621 54.545 4.39 0.00 0.00 3.10
10 11 2.380590 AGGGCCAGGGATAGTAGTAGAG 59.619 54.545 6.18 0.00 0.00 2.43
11 12 2.440309 AGGGCCAGGGATAGTAGTAGA 58.560 52.381 6.18 0.00 0.00 2.59
12 13 4.399483 TTAGGGCCAGGGATAGTAGTAG 57.601 50.000 6.18 0.00 0.00 2.57
13 14 4.171442 AGTTTAGGGCCAGGGATAGTAGTA 59.829 45.833 6.18 0.00 0.00 1.82
14 15 3.051264 AGTTTAGGGCCAGGGATAGTAGT 60.051 47.826 6.18 0.00 0.00 2.73
15 16 3.579151 GAGTTTAGGGCCAGGGATAGTAG 59.421 52.174 6.18 0.00 0.00 2.57
16 17 3.051650 TGAGTTTAGGGCCAGGGATAGTA 60.052 47.826 6.18 0.00 0.00 1.82
17 18 2.293586 TGAGTTTAGGGCCAGGGATAGT 60.294 50.000 6.18 0.00 0.00 2.12
18 19 2.408565 TGAGTTTAGGGCCAGGGATAG 58.591 52.381 6.18 0.00 0.00 2.08
19 20 2.579624 TGAGTTTAGGGCCAGGGATA 57.420 50.000 6.18 0.00 0.00 2.59
20 21 1.681229 TTGAGTTTAGGGCCAGGGAT 58.319 50.000 6.18 0.00 0.00 3.85
21 22 1.451449 TTTGAGTTTAGGGCCAGGGA 58.549 50.000 6.18 0.00 0.00 4.20
22 23 2.171003 CTTTTGAGTTTAGGGCCAGGG 58.829 52.381 6.18 0.00 0.00 4.45
23 24 1.546029 GCTTTTGAGTTTAGGGCCAGG 59.454 52.381 6.18 0.00 0.00 4.45
24 25 2.238521 TGCTTTTGAGTTTAGGGCCAG 58.761 47.619 6.18 0.00 0.00 4.85
25 26 2.373335 TGCTTTTGAGTTTAGGGCCA 57.627 45.000 6.18 0.00 0.00 5.36
26 27 2.610479 GCTTGCTTTTGAGTTTAGGGCC 60.610 50.000 0.00 0.00 0.00 5.80
27 28 2.035832 TGCTTGCTTTTGAGTTTAGGGC 59.964 45.455 0.00 0.00 0.00 5.19
28 29 3.569701 TCTGCTTGCTTTTGAGTTTAGGG 59.430 43.478 0.00 0.00 0.00 3.53
29 30 4.836125 TCTGCTTGCTTTTGAGTTTAGG 57.164 40.909 0.00 0.00 0.00 2.69
30 31 7.704789 AAATTCTGCTTGCTTTTGAGTTTAG 57.295 32.000 0.00 0.00 0.00 1.85
31 32 9.762933 AATAAATTCTGCTTGCTTTTGAGTTTA 57.237 25.926 0.00 0.00 0.00 2.01
32 33 8.553696 CAATAAATTCTGCTTGCTTTTGAGTTT 58.446 29.630 0.00 0.00 0.00 2.66
33 34 7.927629 TCAATAAATTCTGCTTGCTTTTGAGTT 59.072 29.630 0.00 0.00 0.00 3.01
34 35 7.436118 TCAATAAATTCTGCTTGCTTTTGAGT 58.564 30.769 0.00 0.00 0.00 3.41
35 36 7.878477 TCAATAAATTCTGCTTGCTTTTGAG 57.122 32.000 0.00 0.00 0.00 3.02
36 37 8.089597 TCATCAATAAATTCTGCTTGCTTTTGA 58.910 29.630 0.00 0.00 0.00 2.69
37 38 8.246908 TCATCAATAAATTCTGCTTGCTTTTG 57.753 30.769 0.00 0.00 0.00 2.44
38 39 8.092687 ACTCATCAATAAATTCTGCTTGCTTTT 58.907 29.630 0.00 0.00 0.00 2.27
39 40 7.609056 ACTCATCAATAAATTCTGCTTGCTTT 58.391 30.769 0.00 0.00 0.00 3.51
40 41 7.166691 ACTCATCAATAAATTCTGCTTGCTT 57.833 32.000 0.00 0.00 0.00 3.91
41 42 6.770746 ACTCATCAATAAATTCTGCTTGCT 57.229 33.333 0.00 0.00 0.00 3.91
42 43 7.823149 AAACTCATCAATAAATTCTGCTTGC 57.177 32.000 0.00 0.00 0.00 4.01
43 44 9.414295 TGAAAACTCATCAATAAATTCTGCTTG 57.586 29.630 0.00 0.00 0.00 4.01
99 100 9.627123 AGTCGATGGGATTAAATGAAGAAAATA 57.373 29.630 0.00 0.00 0.00 1.40
100 101 8.525290 AGTCGATGGGATTAAATGAAGAAAAT 57.475 30.769 0.00 0.00 0.00 1.82
101 102 7.067008 GGAGTCGATGGGATTAAATGAAGAAAA 59.933 37.037 0.00 0.00 0.00 2.29
102 103 6.542370 GGAGTCGATGGGATTAAATGAAGAAA 59.458 38.462 0.00 0.00 0.00 2.52
103 104 6.055588 GGAGTCGATGGGATTAAATGAAGAA 58.944 40.000 0.00 0.00 0.00 2.52
104 105 5.611374 GGAGTCGATGGGATTAAATGAAGA 58.389 41.667 0.00 0.00 0.00 2.87
105 106 4.449068 CGGAGTCGATGGGATTAAATGAAG 59.551 45.833 0.00 0.00 39.00 3.02
106 107 4.100344 TCGGAGTCGATGGGATTAAATGAA 59.900 41.667 0.00 0.00 40.88 2.57
107 108 3.639561 TCGGAGTCGATGGGATTAAATGA 59.360 43.478 0.00 0.00 40.88 2.57
108 109 3.990092 TCGGAGTCGATGGGATTAAATG 58.010 45.455 0.00 0.00 40.88 2.32
109 110 3.555168 GCTCGGAGTCGATGGGATTAAAT 60.555 47.826 6.90 0.00 45.04 1.40
110 111 2.223971 GCTCGGAGTCGATGGGATTAAA 60.224 50.000 6.90 0.00 45.04 1.52
111 112 1.340248 GCTCGGAGTCGATGGGATTAA 59.660 52.381 6.90 0.00 45.04 1.40
112 113 0.959553 GCTCGGAGTCGATGGGATTA 59.040 55.000 6.90 0.00 45.04 1.75
113 114 1.742768 GCTCGGAGTCGATGGGATT 59.257 57.895 6.90 0.00 45.04 3.01
114 115 2.203771 GGCTCGGAGTCGATGGGAT 61.204 63.158 6.90 0.00 45.04 3.85
115 116 1.991339 TAGGCTCGGAGTCGATGGGA 61.991 60.000 6.90 0.00 45.04 4.37
116 117 1.107538 TTAGGCTCGGAGTCGATGGG 61.108 60.000 6.90 0.00 45.04 4.00
117 118 0.030908 GTTAGGCTCGGAGTCGATGG 59.969 60.000 6.90 0.00 45.04 3.51
118 119 0.738975 TGTTAGGCTCGGAGTCGATG 59.261 55.000 6.90 0.00 45.04 3.84
119 120 1.471119 TTGTTAGGCTCGGAGTCGAT 58.529 50.000 6.90 0.00 45.04 3.59
120 121 1.201647 CTTTGTTAGGCTCGGAGTCGA 59.798 52.381 6.90 0.00 43.86 4.20
121 122 1.630148 CTTTGTTAGGCTCGGAGTCG 58.370 55.000 6.90 0.00 37.82 4.18
122 123 1.337823 TGCTTTGTTAGGCTCGGAGTC 60.338 52.381 0.18 0.18 0.00 3.36
123 124 0.685097 TGCTTTGTTAGGCTCGGAGT 59.315 50.000 6.90 0.00 0.00 3.85
124 125 1.079503 GTGCTTTGTTAGGCTCGGAG 58.920 55.000 0.00 0.00 0.00 4.63
125 126 0.394938 TGTGCTTTGTTAGGCTCGGA 59.605 50.000 0.00 0.00 0.00 4.55
126 127 1.453155 ATGTGCTTTGTTAGGCTCGG 58.547 50.000 0.00 0.00 0.00 4.63
127 128 2.483877 TCAATGTGCTTTGTTAGGCTCG 59.516 45.455 0.00 0.00 0.00 5.03
128 129 3.503748 ACTCAATGTGCTTTGTTAGGCTC 59.496 43.478 0.00 0.00 0.00 4.70
129 130 3.490348 ACTCAATGTGCTTTGTTAGGCT 58.510 40.909 0.00 0.00 0.00 4.58
130 131 3.923017 ACTCAATGTGCTTTGTTAGGC 57.077 42.857 0.00 0.00 0.00 3.93
131 132 9.722056 GATAAATACTCAATGTGCTTTGTTAGG 57.278 33.333 0.00 0.00 0.00 2.69
132 133 9.425893 CGATAAATACTCAATGTGCTTTGTTAG 57.574 33.333 0.00 0.00 0.00 2.34
133 134 8.394877 CCGATAAATACTCAATGTGCTTTGTTA 58.605 33.333 0.00 0.00 0.00 2.41
134 135 7.120579 TCCGATAAATACTCAATGTGCTTTGTT 59.879 33.333 0.00 0.00 0.00 2.83
135 136 6.597672 TCCGATAAATACTCAATGTGCTTTGT 59.402 34.615 0.00 0.00 0.00 2.83
136 137 6.907212 GTCCGATAAATACTCAATGTGCTTTG 59.093 38.462 0.00 0.00 0.00 2.77
137 138 6.823689 AGTCCGATAAATACTCAATGTGCTTT 59.176 34.615 0.00 0.00 0.00 3.51
138 139 6.258727 CAGTCCGATAAATACTCAATGTGCTT 59.741 38.462 0.00 0.00 0.00 3.91
139 140 5.755375 CAGTCCGATAAATACTCAATGTGCT 59.245 40.000 0.00 0.00 0.00 4.40
140 141 5.050091 CCAGTCCGATAAATACTCAATGTGC 60.050 44.000 0.00 0.00 0.00 4.57
141 142 6.049149 ACCAGTCCGATAAATACTCAATGTG 58.951 40.000 0.00 0.00 0.00 3.21
142 143 6.127168 TGACCAGTCCGATAAATACTCAATGT 60.127 38.462 0.00 0.00 0.00 2.71
143 144 6.280643 TGACCAGTCCGATAAATACTCAATG 58.719 40.000 0.00 0.00 0.00 2.82
144 145 6.479972 TGACCAGTCCGATAAATACTCAAT 57.520 37.500 0.00 0.00 0.00 2.57
145 146 5.925506 TGACCAGTCCGATAAATACTCAA 57.074 39.130 0.00 0.00 0.00 3.02
146 147 5.925506 TTGACCAGTCCGATAAATACTCA 57.074 39.130 0.00 0.00 0.00 3.41
147 148 8.882415 TTTATTGACCAGTCCGATAAATACTC 57.118 34.615 10.16 0.00 29.60 2.59
148 149 8.701895 TCTTTATTGACCAGTCCGATAAATACT 58.298 33.333 12.78 0.00 31.93 2.12
149 150 8.882415 TCTTTATTGACCAGTCCGATAAATAC 57.118 34.615 12.78 0.00 31.93 1.89
150 151 8.701895 ACTCTTTATTGACCAGTCCGATAAATA 58.298 33.333 12.78 8.16 31.93 1.40
151 152 7.495934 CACTCTTTATTGACCAGTCCGATAAAT 59.504 37.037 12.78 2.84 31.93 1.40
152 153 6.816640 CACTCTTTATTGACCAGTCCGATAAA 59.183 38.462 12.21 12.21 31.70 1.40
153 154 6.070995 ACACTCTTTATTGACCAGTCCGATAA 60.071 38.462 0.00 0.00 0.00 1.75
154 155 5.421056 ACACTCTTTATTGACCAGTCCGATA 59.579 40.000 0.00 0.00 0.00 2.92
155 156 4.223032 ACACTCTTTATTGACCAGTCCGAT 59.777 41.667 0.00 0.00 0.00 4.18
156 157 3.576982 ACACTCTTTATTGACCAGTCCGA 59.423 43.478 0.00 0.00 0.00 4.55
157 158 3.926616 ACACTCTTTATTGACCAGTCCG 58.073 45.455 0.00 0.00 0.00 4.79
158 159 6.465084 ACTTACACTCTTTATTGACCAGTCC 58.535 40.000 0.00 0.00 0.00 3.85
159 160 7.152645 TGACTTACACTCTTTATTGACCAGTC 58.847 38.462 0.00 0.00 0.00 3.51
160 161 7.062749 TGACTTACACTCTTTATTGACCAGT 57.937 36.000 0.00 0.00 0.00 4.00
161 162 7.360438 GCTTGACTTACACTCTTTATTGACCAG 60.360 40.741 0.00 0.00 0.00 4.00
162 163 6.426937 GCTTGACTTACACTCTTTATTGACCA 59.573 38.462 0.00 0.00 0.00 4.02
163 164 6.426937 TGCTTGACTTACACTCTTTATTGACC 59.573 38.462 0.00 0.00 0.00 4.02
164 165 7.421530 TGCTTGACTTACACTCTTTATTGAC 57.578 36.000 0.00 0.00 0.00 3.18
165 166 9.371136 CTATGCTTGACTTACACTCTTTATTGA 57.629 33.333 0.00 0.00 0.00 2.57
166 167 9.155975 ACTATGCTTGACTTACACTCTTTATTG 57.844 33.333 0.00 0.00 0.00 1.90
167 168 9.155975 CACTATGCTTGACTTACACTCTTTATT 57.844 33.333 0.00 0.00 0.00 1.40
168 169 8.531982 TCACTATGCTTGACTTACACTCTTTAT 58.468 33.333 0.00 0.00 0.00 1.40
169 170 7.813148 GTCACTATGCTTGACTTACACTCTTTA 59.187 37.037 0.00 0.00 40.30 1.85
170 171 6.647067 GTCACTATGCTTGACTTACACTCTTT 59.353 38.462 0.00 0.00 40.30 2.52
171 172 6.159988 GTCACTATGCTTGACTTACACTCTT 58.840 40.000 0.00 0.00 40.30 2.85
172 173 5.715070 GTCACTATGCTTGACTTACACTCT 58.285 41.667 0.00 0.00 40.30 3.24
181 182 5.111989 TCTAATGCAGTCACTATGCTTGAC 58.888 41.667 0.00 0.00 44.17 3.18
182 183 5.343307 TCTAATGCAGTCACTATGCTTGA 57.657 39.130 0.00 0.00 44.17 3.02
183 184 6.426980 TTTCTAATGCAGTCACTATGCTTG 57.573 37.500 0.00 0.00 44.17 4.01
184 185 7.636150 ATTTTCTAATGCAGTCACTATGCTT 57.364 32.000 0.00 0.00 44.17 3.91
185 186 8.915057 ATATTTTCTAATGCAGTCACTATGCT 57.085 30.769 0.00 0.00 44.17 3.79
190 191 9.988815 CTACCTATATTTTCTAATGCAGTCACT 57.011 33.333 0.00 0.00 0.00 3.41
191 192 8.713271 GCTACCTATATTTTCTAATGCAGTCAC 58.287 37.037 0.00 0.00 0.00 3.67
192 193 8.428852 TGCTACCTATATTTTCTAATGCAGTCA 58.571 33.333 0.00 0.00 0.00 3.41
193 194 8.833231 TGCTACCTATATTTTCTAATGCAGTC 57.167 34.615 0.00 0.00 0.00 3.51
194 195 7.389053 GCTGCTACCTATATTTTCTAATGCAGT 59.611 37.037 0.00 0.00 43.09 4.40
195 196 7.388776 TGCTGCTACCTATATTTTCTAATGCAG 59.611 37.037 0.00 0.00 43.73 4.41
196 197 7.223584 TGCTGCTACCTATATTTTCTAATGCA 58.776 34.615 0.00 0.00 0.00 3.96
197 198 7.604164 TCTGCTGCTACCTATATTTTCTAATGC 59.396 37.037 0.00 0.00 0.00 3.56
198 199 8.930760 GTCTGCTGCTACCTATATTTTCTAATG 58.069 37.037 0.00 0.00 0.00 1.90
199 200 8.651389 TGTCTGCTGCTACCTATATTTTCTAAT 58.349 33.333 0.00 0.00 0.00 1.73
200 201 8.018537 TGTCTGCTGCTACCTATATTTTCTAA 57.981 34.615 0.00 0.00 0.00 2.10
201 202 7.597288 TGTCTGCTGCTACCTATATTTTCTA 57.403 36.000 0.00 0.00 0.00 2.10
202 203 6.485830 TGTCTGCTGCTACCTATATTTTCT 57.514 37.500 0.00 0.00 0.00 2.52
203 204 6.931281 TCATGTCTGCTGCTACCTATATTTTC 59.069 38.462 0.00 0.00 0.00 2.29
204 205 6.830912 TCATGTCTGCTGCTACCTATATTTT 58.169 36.000 0.00 0.00 0.00 1.82
205 206 6.425210 TCATGTCTGCTGCTACCTATATTT 57.575 37.500 0.00 0.00 0.00 1.40
206 207 6.617782 ATCATGTCTGCTGCTACCTATATT 57.382 37.500 0.00 0.00 0.00 1.28
207 208 7.724490 TTATCATGTCTGCTGCTACCTATAT 57.276 36.000 0.00 0.00 0.00 0.86
208 209 7.539034 TTTATCATGTCTGCTGCTACCTATA 57.461 36.000 0.00 0.00 0.00 1.31
209 210 6.425210 TTTATCATGTCTGCTGCTACCTAT 57.575 37.500 0.00 0.00 0.00 2.57
210 211 5.869649 TTTATCATGTCTGCTGCTACCTA 57.130 39.130 0.00 0.00 0.00 3.08
211 212 4.760530 TTTATCATGTCTGCTGCTACCT 57.239 40.909 0.00 0.00 0.00 3.08
212 213 5.123820 TGTTTTTATCATGTCTGCTGCTACC 59.876 40.000 0.00 0.00 0.00 3.18
213 214 6.182039 TGTTTTTATCATGTCTGCTGCTAC 57.818 37.500 0.00 0.00 0.00 3.58
214 215 6.206438 TGTTGTTTTTATCATGTCTGCTGCTA 59.794 34.615 0.00 0.00 0.00 3.49
215 216 5.009911 TGTTGTTTTTATCATGTCTGCTGCT 59.990 36.000 0.00 0.00 0.00 4.24
216 217 5.221880 TGTTGTTTTTATCATGTCTGCTGC 58.778 37.500 0.00 0.00 0.00 5.25
217 218 6.696583 TGTTGTTGTTTTTATCATGTCTGCTG 59.303 34.615 0.00 0.00 0.00 4.41
218 219 6.804677 TGTTGTTGTTTTTATCATGTCTGCT 58.195 32.000 0.00 0.00 0.00 4.24
219 220 7.462109 TTGTTGTTGTTTTTATCATGTCTGC 57.538 32.000 0.00 0.00 0.00 4.26
220 221 9.467258 AGATTGTTGTTGTTTTTATCATGTCTG 57.533 29.630 0.00 0.00 0.00 3.51
221 222 9.467258 CAGATTGTTGTTGTTTTTATCATGTCT 57.533 29.630 0.00 0.00 0.00 3.41
222 223 9.462174 TCAGATTGTTGTTGTTTTTATCATGTC 57.538 29.630 0.00 0.00 0.00 3.06
223 224 9.248291 GTCAGATTGTTGTTGTTTTTATCATGT 57.752 29.630 0.00 0.00 0.00 3.21
224 225 9.467258 AGTCAGATTGTTGTTGTTTTTATCATG 57.533 29.630 0.00 0.00 0.00 3.07
225 226 9.467258 CAGTCAGATTGTTGTTGTTTTTATCAT 57.533 29.630 0.00 0.00 0.00 2.45
226 227 7.920151 CCAGTCAGATTGTTGTTGTTTTTATCA 59.080 33.333 0.00 0.00 0.00 2.15
227 228 7.096065 GCCAGTCAGATTGTTGTTGTTTTTATC 60.096 37.037 0.00 0.00 0.00 1.75
228 229 6.701400 GCCAGTCAGATTGTTGTTGTTTTTAT 59.299 34.615 0.00 0.00 0.00 1.40
229 230 6.039616 GCCAGTCAGATTGTTGTTGTTTTTA 58.960 36.000 0.00 0.00 0.00 1.52
230 231 4.869861 GCCAGTCAGATTGTTGTTGTTTTT 59.130 37.500 0.00 0.00 0.00 1.94
231 232 4.081752 TGCCAGTCAGATTGTTGTTGTTTT 60.082 37.500 0.00 0.00 0.00 2.43
232 233 3.446873 TGCCAGTCAGATTGTTGTTGTTT 59.553 39.130 0.00 0.00 0.00 2.83
233 234 3.023119 TGCCAGTCAGATTGTTGTTGTT 58.977 40.909 0.00 0.00 0.00 2.83
234 235 2.653726 TGCCAGTCAGATTGTTGTTGT 58.346 42.857 0.00 0.00 0.00 3.32
235 236 3.504906 AGATGCCAGTCAGATTGTTGTTG 59.495 43.478 0.00 0.00 0.00 3.33
236 237 3.759581 AGATGCCAGTCAGATTGTTGTT 58.240 40.909 0.00 0.00 0.00 2.83
237 238 3.430042 AGATGCCAGTCAGATTGTTGT 57.570 42.857 0.00 0.00 0.00 3.32
238 239 4.778534 AAAGATGCCAGTCAGATTGTTG 57.221 40.909 0.00 0.00 0.00 3.33
239 240 5.769662 TGTTAAAGATGCCAGTCAGATTGTT 59.230 36.000 0.00 0.00 0.00 2.83
240 241 5.316167 TGTTAAAGATGCCAGTCAGATTGT 58.684 37.500 0.00 0.00 0.00 2.71
241 242 5.885230 TGTTAAAGATGCCAGTCAGATTG 57.115 39.130 0.00 0.00 0.00 2.67
242 243 7.568349 TCTATGTTAAAGATGCCAGTCAGATT 58.432 34.615 0.00 0.00 0.00 2.40
243 244 7.129457 TCTATGTTAAAGATGCCAGTCAGAT 57.871 36.000 0.00 0.00 0.00 2.90
244 245 6.544928 TCTATGTTAAAGATGCCAGTCAGA 57.455 37.500 0.00 0.00 0.00 3.27
245 246 7.615582 TTTCTATGTTAAAGATGCCAGTCAG 57.384 36.000 0.00 0.00 0.00 3.51
246 247 7.882791 TCTTTTCTATGTTAAAGATGCCAGTCA 59.117 33.333 0.00 0.00 35.93 3.41
247 248 8.178313 GTCTTTTCTATGTTAAAGATGCCAGTC 58.822 37.037 0.00 0.00 41.07 3.51
248 249 7.665559 TGTCTTTTCTATGTTAAAGATGCCAGT 59.334 33.333 0.00 0.00 41.07 4.00
249 250 7.965107 GTGTCTTTTCTATGTTAAAGATGCCAG 59.035 37.037 0.00 0.00 41.07 4.85
250 251 7.446931 TGTGTCTTTTCTATGTTAAAGATGCCA 59.553 33.333 0.00 0.00 41.07 4.92
251 252 7.816640 TGTGTCTTTTCTATGTTAAAGATGCC 58.183 34.615 0.00 0.00 41.07 4.40
265 266 8.037758 CCTGACTGTTATCTATGTGTCTTTTCT 58.962 37.037 0.00 0.00 0.00 2.52
266 267 7.819900 ACCTGACTGTTATCTATGTGTCTTTTC 59.180 37.037 0.00 0.00 0.00 2.29
267 268 7.680730 ACCTGACTGTTATCTATGTGTCTTTT 58.319 34.615 0.00 0.00 0.00 2.27
268 269 7.246171 ACCTGACTGTTATCTATGTGTCTTT 57.754 36.000 0.00 0.00 0.00 2.52
269 270 6.859112 ACCTGACTGTTATCTATGTGTCTT 57.141 37.500 0.00 0.00 0.00 3.01
270 271 6.859112 AACCTGACTGTTATCTATGTGTCT 57.141 37.500 0.00 0.00 0.00 3.41
271 272 7.773149 ACTAACCTGACTGTTATCTATGTGTC 58.227 38.462 0.00 0.00 30.75 3.67
272 273 7.719871 ACTAACCTGACTGTTATCTATGTGT 57.280 36.000 0.00 0.00 30.75 3.72
302 303 9.657121 GCTGTAATGTAGCTTCAATCTTTTATC 57.343 33.333 0.00 0.00 38.14 1.75
303 304 8.624776 GGCTGTAATGTAGCTTCAATCTTTTAT 58.375 33.333 0.00 0.00 40.92 1.40
304 305 7.609918 TGGCTGTAATGTAGCTTCAATCTTTTA 59.390 33.333 0.00 0.00 40.92 1.52
305 306 6.434028 TGGCTGTAATGTAGCTTCAATCTTTT 59.566 34.615 0.00 0.00 40.92 2.27
306 307 5.945784 TGGCTGTAATGTAGCTTCAATCTTT 59.054 36.000 0.00 0.00 40.92 2.52
307 308 5.500234 TGGCTGTAATGTAGCTTCAATCTT 58.500 37.500 0.00 0.00 40.92 2.40
308 309 5.102953 TGGCTGTAATGTAGCTTCAATCT 57.897 39.130 0.00 0.00 40.92 2.40
309 310 5.123820 TGTTGGCTGTAATGTAGCTTCAATC 59.876 40.000 0.00 0.00 40.92 2.67
310 311 5.009631 TGTTGGCTGTAATGTAGCTTCAAT 58.990 37.500 0.00 0.00 40.92 2.57
311 312 4.393834 TGTTGGCTGTAATGTAGCTTCAA 58.606 39.130 0.00 0.00 40.92 2.69
312 313 4.014569 TGTTGGCTGTAATGTAGCTTCA 57.985 40.909 0.00 0.00 40.92 3.02
313 314 5.123820 TGAATGTTGGCTGTAATGTAGCTTC 59.876 40.000 0.00 0.00 40.92 3.86
314 315 5.009631 TGAATGTTGGCTGTAATGTAGCTT 58.990 37.500 0.00 0.00 40.92 3.74
315 316 4.396166 GTGAATGTTGGCTGTAATGTAGCT 59.604 41.667 0.00 0.00 40.92 3.32
316 317 4.438744 GGTGAATGTTGGCTGTAATGTAGC 60.439 45.833 0.00 0.00 40.41 3.58
317 318 4.699735 TGGTGAATGTTGGCTGTAATGTAG 59.300 41.667 0.00 0.00 0.00 2.74
318 319 4.657013 TGGTGAATGTTGGCTGTAATGTA 58.343 39.130 0.00 0.00 0.00 2.29
319 320 3.495331 TGGTGAATGTTGGCTGTAATGT 58.505 40.909 0.00 0.00 0.00 2.71
320 321 4.517952 TTGGTGAATGTTGGCTGTAATG 57.482 40.909 0.00 0.00 0.00 1.90
321 322 5.743636 AATTGGTGAATGTTGGCTGTAAT 57.256 34.783 0.00 0.00 0.00 1.89
322 323 5.543507 AAATTGGTGAATGTTGGCTGTAA 57.456 34.783 0.00 0.00 0.00 2.41
323 324 6.849085 ATAAATTGGTGAATGTTGGCTGTA 57.151 33.333 0.00 0.00 0.00 2.74
324 325 5.743636 ATAAATTGGTGAATGTTGGCTGT 57.256 34.783 0.00 0.00 0.00 4.40
325 326 8.721019 AATAATAAATTGGTGAATGTTGGCTG 57.279 30.769 0.00 0.00 0.00 4.85
403 404 9.129209 GCTAGCTTCTGTTTTGTTTTAAATAGG 57.871 33.333 7.70 0.00 30.08 2.57
404 405 9.129209 GGCTAGCTTCTGTTTTGTTTTAAATAG 57.871 33.333 15.72 0.00 0.00 1.73
1306 6652 8.621532 TGCACAAATAAGAAGTTAGATTCTGT 57.378 30.769 0.00 0.00 39.47 3.41
1566 6950 0.979665 CTGCTCCTTCTCCCTGTCAA 59.020 55.000 0.00 0.00 0.00 3.18
2004 9352 8.679100 AGTTACAAAGTTATGTTGTACTGCAAA 58.321 29.630 0.00 0.00 40.30 3.68
2005 9353 8.215926 AGTTACAAAGTTATGTTGTACTGCAA 57.784 30.769 0.00 0.00 40.30 4.08
2006 9354 7.795482 AGTTACAAAGTTATGTTGTACTGCA 57.205 32.000 0.00 0.00 40.30 4.41
2007 9355 9.199982 TCTAGTTACAAAGTTATGTTGTACTGC 57.800 33.333 0.00 0.00 40.30 4.40
2135 9483 9.533831 AGAATGTGGGATAAAACTTACAGATTT 57.466 29.630 0.00 0.00 0.00 2.17
2137 9485 9.614792 GTAGAATGTGGGATAAAACTTACAGAT 57.385 33.333 0.00 0.00 0.00 2.90
2138 9486 8.598916 TGTAGAATGTGGGATAAAACTTACAGA 58.401 33.333 0.00 0.00 0.00 3.41
2139 9487 8.786826 TGTAGAATGTGGGATAAAACTTACAG 57.213 34.615 0.00 0.00 0.00 2.74
2146 9494 9.120538 GCTTTCTATGTAGAATGTGGGATAAAA 57.879 33.333 13.77 0.00 41.52 1.52
2147 9495 8.494433 AGCTTTCTATGTAGAATGTGGGATAAA 58.506 33.333 13.77 0.00 41.52 1.40
2148 9496 8.034313 AGCTTTCTATGTAGAATGTGGGATAA 57.966 34.615 13.77 0.00 41.52 1.75
2149 9497 7.618019 AGCTTTCTATGTAGAATGTGGGATA 57.382 36.000 13.77 0.00 41.52 2.59
2150 9498 6.506538 AGCTTTCTATGTAGAATGTGGGAT 57.493 37.500 13.77 0.00 41.52 3.85
2151 9499 5.957771 AGCTTTCTATGTAGAATGTGGGA 57.042 39.130 13.77 0.00 41.52 4.37
2152 9500 6.375455 ACAAAGCTTTCTATGTAGAATGTGGG 59.625 38.462 9.23 0.00 41.52 4.61
2153 9501 7.383102 ACAAAGCTTTCTATGTAGAATGTGG 57.617 36.000 9.23 0.00 41.52 4.17
2154 9502 8.292448 ACAACAAAGCTTTCTATGTAGAATGTG 58.708 33.333 9.23 2.02 41.52 3.21
2155 9503 8.292448 CACAACAAAGCTTTCTATGTAGAATGT 58.708 33.333 9.23 3.70 41.52 2.71
2156 9504 7.272084 GCACAACAAAGCTTTCTATGTAGAATG 59.728 37.037 9.23 3.07 41.52 2.67
2157 9505 7.175641 AGCACAACAAAGCTTTCTATGTAGAAT 59.824 33.333 9.23 0.00 41.52 2.40
2158 9506 6.486657 AGCACAACAAAGCTTTCTATGTAGAA 59.513 34.615 9.23 0.00 38.01 2.10
2159 9507 5.997746 AGCACAACAAAGCTTTCTATGTAGA 59.002 36.000 9.23 0.00 38.01 2.59
2160 9508 6.082338 CAGCACAACAAAGCTTTCTATGTAG 58.918 40.000 9.23 10.01 39.50 2.74
2161 9509 5.562696 GCAGCACAACAAAGCTTTCTATGTA 60.563 40.000 9.23 0.00 39.50 2.29
2162 9510 4.794003 GCAGCACAACAAAGCTTTCTATGT 60.794 41.667 9.23 11.49 39.50 2.29
2163 9511 3.671928 GCAGCACAACAAAGCTTTCTATG 59.328 43.478 9.23 10.85 39.50 2.23
2164 9512 3.318839 TGCAGCACAACAAAGCTTTCTAT 59.681 39.130 9.23 0.00 39.50 1.98
2165 9513 2.687425 TGCAGCACAACAAAGCTTTCTA 59.313 40.909 9.23 0.00 39.50 2.10
2166 9514 1.477700 TGCAGCACAACAAAGCTTTCT 59.522 42.857 9.23 0.00 39.50 2.52
2167 9515 1.925229 TGCAGCACAACAAAGCTTTC 58.075 45.000 9.23 0.00 39.50 2.62
2168 9516 2.383368 TTGCAGCACAACAAAGCTTT 57.617 40.000 5.69 5.69 39.50 3.51
2169 9517 2.273557 CTTTGCAGCACAACAAAGCTT 58.726 42.857 0.00 0.00 44.32 3.74
2170 9518 1.930567 CTTTGCAGCACAACAAAGCT 58.069 45.000 0.00 0.00 44.32 3.74
2173 9521 3.309961 TCAACTTTGCAGCACAACAAA 57.690 38.095 0.00 0.00 38.23 2.83
2174 9522 3.252400 CTTCAACTTTGCAGCACAACAA 58.748 40.909 0.00 0.00 38.23 2.83
2175 9523 2.230992 ACTTCAACTTTGCAGCACAACA 59.769 40.909 0.00 0.00 38.23 3.33
2176 9524 2.879826 ACTTCAACTTTGCAGCACAAC 58.120 42.857 0.00 0.00 38.23 3.32
2177 9525 3.441922 TGTACTTCAACTTTGCAGCACAA 59.558 39.130 0.00 0.00 36.13 3.33
2178 9526 3.013219 TGTACTTCAACTTTGCAGCACA 58.987 40.909 0.00 0.00 27.73 4.57
2179 9527 3.691049 TGTACTTCAACTTTGCAGCAC 57.309 42.857 0.00 0.00 0.00 4.40
2180 9528 4.710423 TTTGTACTTCAACTTTGCAGCA 57.290 36.364 0.00 0.00 35.61 4.41
2181 9529 6.695278 TGTATTTTGTACTTCAACTTTGCAGC 59.305 34.615 0.00 0.00 35.61 5.25
2182 9530 8.693504 CATGTATTTTGTACTTCAACTTTGCAG 58.306 33.333 0.00 0.00 35.61 4.41
2183 9531 8.194104 ACATGTATTTTGTACTTCAACTTTGCA 58.806 29.630 0.00 0.00 35.61 4.08
2184 9532 8.574196 ACATGTATTTTGTACTTCAACTTTGC 57.426 30.769 0.00 0.00 35.61 3.68
2228 9576 8.638565 CGATTCGTGCAAATAATTTTCTCTTTT 58.361 29.630 0.00 0.00 0.00 2.27
2229 9577 7.807907 ACGATTCGTGCAAATAATTTTCTCTTT 59.192 29.630 11.56 0.00 39.18 2.52
2230 9578 7.305474 ACGATTCGTGCAAATAATTTTCTCTT 58.695 30.769 11.56 0.00 39.18 2.85
2231 9579 6.842163 ACGATTCGTGCAAATAATTTTCTCT 58.158 32.000 11.56 0.00 39.18 3.10
2247 9595 1.935873 CATTCCTGCATCACGATTCGT 59.064 47.619 5.75 5.75 42.36 3.85
2248 9596 2.204237 TCATTCCTGCATCACGATTCG 58.796 47.619 4.14 4.14 0.00 3.34
2249 9597 3.002042 CACTCATTCCTGCATCACGATTC 59.998 47.826 0.00 0.00 0.00 2.52
2250 9598 2.941064 CACTCATTCCTGCATCACGATT 59.059 45.455 0.00 0.00 0.00 3.34
2251 9599 2.558378 CACTCATTCCTGCATCACGAT 58.442 47.619 0.00 0.00 0.00 3.73
2252 9600 1.405933 CCACTCATTCCTGCATCACGA 60.406 52.381 0.00 0.00 0.00 4.35
2253 9601 1.012086 CCACTCATTCCTGCATCACG 58.988 55.000 0.00 0.00 0.00 4.35
2254 9602 2.119801 ACCACTCATTCCTGCATCAC 57.880 50.000 0.00 0.00 0.00 3.06
2255 9603 2.439409 CAACCACTCATTCCTGCATCA 58.561 47.619 0.00 0.00 0.00 3.07
2256 9604 1.747355 CCAACCACTCATTCCTGCATC 59.253 52.381 0.00 0.00 0.00 3.91
2257 9605 1.355381 TCCAACCACTCATTCCTGCAT 59.645 47.619 0.00 0.00 0.00 3.96
2258 9606 0.770499 TCCAACCACTCATTCCTGCA 59.230 50.000 0.00 0.00 0.00 4.41
2259 9607 2.134789 ATCCAACCACTCATTCCTGC 57.865 50.000 0.00 0.00 0.00 4.85
2260 9608 4.080356 TCCTTATCCAACCACTCATTCCTG 60.080 45.833 0.00 0.00 0.00 3.86
2261 9609 4.111577 TCCTTATCCAACCACTCATTCCT 58.888 43.478 0.00 0.00 0.00 3.36
2262 9610 4.080299 ACTCCTTATCCAACCACTCATTCC 60.080 45.833 0.00 0.00 0.00 3.01
2263 9611 5.104259 ACTCCTTATCCAACCACTCATTC 57.896 43.478 0.00 0.00 0.00 2.67
2264 9612 5.104485 GGTACTCCTTATCCAACCACTCATT 60.104 44.000 0.00 0.00 0.00 2.57
2265 9613 4.409247 GGTACTCCTTATCCAACCACTCAT 59.591 45.833 0.00 0.00 0.00 2.90
2266 9614 3.773119 GGTACTCCTTATCCAACCACTCA 59.227 47.826 0.00 0.00 0.00 3.41
2267 9615 3.134262 GGGTACTCCTTATCCAACCACTC 59.866 52.174 0.00 0.00 29.98 3.51
2268 9616 3.113043 GGGTACTCCTTATCCAACCACT 58.887 50.000 0.00 0.00 29.98 4.00
2269 9617 2.159000 CGGGTACTCCTTATCCAACCAC 60.159 54.545 0.00 0.00 28.52 4.16
2270 9618 2.112998 CGGGTACTCCTTATCCAACCA 58.887 52.381 0.00 0.00 28.52 3.67
2271 9619 1.415289 CCGGGTACTCCTTATCCAACC 59.585 57.143 0.00 0.00 28.52 3.77
2272 9620 1.415289 CCCGGGTACTCCTTATCCAAC 59.585 57.143 14.18 0.00 28.52 3.77
2273 9621 1.008693 ACCCGGGTACTCCTTATCCAA 59.991 52.381 29.13 0.00 28.52 3.53
2274 9622 0.638292 ACCCGGGTACTCCTTATCCA 59.362 55.000 29.13 0.00 28.52 3.41
2275 9623 1.046204 CACCCGGGTACTCCTTATCC 58.954 60.000 29.72 0.00 0.00 2.59
2276 9624 0.391966 GCACCCGGGTACTCCTTATC 59.608 60.000 29.72 3.11 0.00 1.75
2277 9625 0.325860 TGCACCCGGGTACTCCTTAT 60.326 55.000 29.72 0.00 0.00 1.73
2278 9626 0.325860 ATGCACCCGGGTACTCCTTA 60.326 55.000 29.72 4.16 0.00 2.69
2279 9627 0.325860 TATGCACCCGGGTACTCCTT 60.326 55.000 29.72 14.89 0.00 3.36
2280 9628 0.759436 CTATGCACCCGGGTACTCCT 60.759 60.000 29.72 13.70 0.00 3.69
2281 9629 1.746517 CTATGCACCCGGGTACTCC 59.253 63.158 29.72 15.52 0.00 3.85
2282 9630 1.746517 CCTATGCACCCGGGTACTC 59.253 63.158 29.72 18.85 0.00 2.59
2283 9631 2.440817 GCCTATGCACCCGGGTACT 61.441 63.158 29.72 16.37 37.47 2.73
2284 9632 2.110420 GCCTATGCACCCGGGTAC 59.890 66.667 29.72 23.40 37.47 3.34
2285 9633 2.041301 AGCCTATGCACCCGGGTA 60.041 61.111 29.72 13.39 41.13 3.69
2286 9634 2.599139 TAGAGCCTATGCACCCGGGT 62.599 60.000 24.16 24.16 41.13 5.28
2287 9635 1.407656 TTAGAGCCTATGCACCCGGG 61.408 60.000 22.25 22.25 41.13 5.73
2288 9636 0.468226 TTTAGAGCCTATGCACCCGG 59.532 55.000 0.00 0.00 41.13 5.73
2289 9637 1.940613 GTTTTAGAGCCTATGCACCCG 59.059 52.381 0.00 0.00 41.13 5.28
2290 9638 2.999331 TGTTTTAGAGCCTATGCACCC 58.001 47.619 0.00 0.00 41.13 4.61
2291 9639 3.947834 ACATGTTTTAGAGCCTATGCACC 59.052 43.478 0.00 0.00 41.13 5.01
2292 9640 5.567138 AACATGTTTTAGAGCCTATGCAC 57.433 39.130 4.92 0.00 41.13 4.57
2293 9641 6.588719 AAAACATGTTTTAGAGCCTATGCA 57.411 33.333 30.29 0.00 40.61 3.96
2294 9642 5.739161 CGAAAACATGTTTTAGAGCCTATGC 59.261 40.000 31.09 16.24 42.26 3.14
2295 9643 6.842163 ACGAAAACATGTTTTAGAGCCTATG 58.158 36.000 35.72 19.93 42.26 2.23
2296 9644 7.361799 GGAACGAAAACATGTTTTAGAGCCTAT 60.362 37.037 35.72 18.76 42.26 2.57
2297 9645 6.072893 GGAACGAAAACATGTTTTAGAGCCTA 60.073 38.462 35.72 0.00 42.26 3.93
2298 9646 5.278315 GGAACGAAAACATGTTTTAGAGCCT 60.278 40.000 35.72 22.37 42.26 4.58
2299 9647 4.915667 GGAACGAAAACATGTTTTAGAGCC 59.084 41.667 35.72 30.48 42.26 4.70
2300 9648 5.516090 TGGAACGAAAACATGTTTTAGAGC 58.484 37.500 35.72 27.54 42.26 4.09
2301 9649 7.414436 TCTTGGAACGAAAACATGTTTTAGAG 58.586 34.615 35.72 28.45 42.26 2.43
2302 9650 7.323049 TCTTGGAACGAAAACATGTTTTAGA 57.677 32.000 35.72 27.48 42.26 2.10
2303 9651 9.329913 CTATCTTGGAACGAAAACATGTTTTAG 57.670 33.333 31.09 30.85 42.26 1.85
2304 9652 8.293867 CCTATCTTGGAACGAAAACATGTTTTA 58.706 33.333 31.09 15.47 42.26 1.52
2305 9653 7.145323 CCTATCTTGGAACGAAAACATGTTTT 58.855 34.615 31.40 31.40 44.59 2.43
2306 9654 6.264518 ACCTATCTTGGAACGAAAACATGTTT 59.735 34.615 18.13 18.13 0.00 2.83
2307 9655 5.768164 ACCTATCTTGGAACGAAAACATGTT 59.232 36.000 4.92 4.92 0.00 2.71
2308 9656 5.181245 CACCTATCTTGGAACGAAAACATGT 59.819 40.000 0.00 0.00 0.00 3.21
2309 9657 5.411361 TCACCTATCTTGGAACGAAAACATG 59.589 40.000 0.00 0.00 0.00 3.21
2310 9658 5.556915 TCACCTATCTTGGAACGAAAACAT 58.443 37.500 0.00 0.00 0.00 2.71
2311 9659 4.963373 TCACCTATCTTGGAACGAAAACA 58.037 39.130 0.00 0.00 0.00 2.83
2312 9660 4.142881 GCTCACCTATCTTGGAACGAAAAC 60.143 45.833 0.00 0.00 0.00 2.43
2313 9661 4.000988 GCTCACCTATCTTGGAACGAAAA 58.999 43.478 0.00 0.00 0.00 2.29
2314 9662 3.596214 GCTCACCTATCTTGGAACGAAA 58.404 45.455 0.00 0.00 0.00 3.46
2315 9663 2.093658 GGCTCACCTATCTTGGAACGAA 60.094 50.000 0.00 0.00 0.00 3.85
2316 9664 1.480954 GGCTCACCTATCTTGGAACGA 59.519 52.381 0.00 0.00 0.00 3.85
2317 9665 1.941325 GGCTCACCTATCTTGGAACG 58.059 55.000 0.00 0.00 0.00 3.95
4761 19305 6.922957 ACAGCAACACATATTTTAACCAACAG 59.077 34.615 0.00 0.00 0.00 3.16
5866 22530 5.639506 CAGTACCGATAAATGCATAGAAGGG 59.360 44.000 0.00 1.82 0.00 3.95
6129 23242 2.664402 AACCAACCAGCAGTTCATCT 57.336 45.000 0.00 0.00 36.18 2.90
6358 25121 2.786854 CACTCGTTGTAGATCGACCAG 58.213 52.381 3.33 0.00 32.65 4.00
6425 25188 2.453521 ACACTGACGCCTCATTACCTA 58.546 47.619 0.00 0.00 0.00 3.08
7306 26077 8.579850 AGTATCTTTTGCAAGGACATATTCAA 57.420 30.769 0.00 0.00 0.00 2.69
7455 26244 2.104963 GCGGAGAATGTCTATCCCCTTT 59.895 50.000 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.