Multiple sequence alignment - TraesCS7B01G474600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G474600 chr7B 100.000 2876 0 0 1 2876 730818947 730816072 0.000000e+00 5312.0
1 TraesCS7B01G474600 chr7D 88.734 2290 129 61 77 2280 628210573 628212819 0.000000e+00 2680.0
2 TraesCS7B01G474600 chr7D 97.605 167 4 0 2710 2876 628212819 628212985 1.300000e-73 287.0
3 TraesCS7B01G474600 chr7D 97.297 37 1 0 2839 2875 418919026 418918990 2.390000e-06 63.9
4 TraesCS7B01G474600 chr7A 87.481 1925 140 55 43 1907 724968222 724966339 0.000000e+00 2126.0
5 TraesCS7B01G474600 chr7A 99.323 443 2 1 2276 2718 696891243 696890802 0.000000e+00 800.0
6 TraesCS7B01G474600 chr7A 96.085 281 8 2 2001 2280 724966164 724965886 3.380000e-124 455.0
7 TraesCS7B01G474600 chr7A 97.006 167 5 0 2710 2876 724965886 724965720 6.070000e-72 281.0
8 TraesCS7B01G474600 chr3D 86.393 926 123 2 985 1907 29705001 29705926 0.000000e+00 1009.0
9 TraesCS7B01G474600 chr3D 91.873 283 18 4 2001 2280 29706116 29706396 9.660000e-105 390.0
10 TraesCS7B01G474600 chr3D 91.667 180 14 1 2698 2876 29706383 29706562 6.150000e-62 248.0
11 TraesCS7B01G474600 chr3D 90.411 73 2 3 1906 1973 29705970 29706042 1.100000e-14 91.6
12 TraesCS7B01G474600 chr3B 86.393 926 118 4 989 1907 50932425 50933349 0.000000e+00 1005.0
13 TraesCS7B01G474600 chr3B 99.323 443 2 1 2276 2718 233325862 233326303 0.000000e+00 800.0
14 TraesCS7B01G474600 chr3B 99.321 442 3 0 2276 2717 556051408 556050967 0.000000e+00 800.0
15 TraesCS7B01G474600 chr3B 90.244 287 21 5 2001 2280 50937430 50937716 4.530000e-98 368.0
16 TraesCS7B01G474600 chr3B 85.390 308 29 11 1906 2203 50933393 50933694 3.600000e-79 305.0
17 TraesCS7B01G474600 chr3B 89.720 214 19 1 1697 1907 50937038 50937251 1.310000e-68 270.0
18 TraesCS7B01G474600 chr3B 91.018 167 13 1 2710 2876 50937716 50937880 1.040000e-54 224.0
19 TraesCS7B01G474600 chr3B 89.349 169 11 4 2710 2876 50933756 50933919 3.760000e-49 206.0
20 TraesCS7B01G474600 chr3B 94.118 68 4 0 1906 1973 50937295 50937362 1.410000e-18 104.0
21 TraesCS7B01G474600 chr3A 86.049 939 125 3 973 1907 40362740 40363676 0.000000e+00 1003.0
22 TraesCS7B01G474600 chr3A 90.036 281 22 4 2001 2275 40363855 40364135 2.720000e-95 359.0
23 TraesCS7B01G474600 chr3A 95.699 93 4 0 2784 2876 40364189 40364281 1.790000e-32 150.0
24 TraesCS7B01G474600 chr6B 99.324 444 2 1 2276 2719 339383477 339383035 0.000000e+00 802.0
25 TraesCS7B01G474600 chr4B 99.546 441 1 1 2276 2716 187176842 187177281 0.000000e+00 802.0
26 TraesCS7B01G474600 chr4B 98.451 452 4 3 2276 2726 217277721 217278170 0.000000e+00 793.0
27 TraesCS7B01G474600 chr2A 99.105 447 3 1 2276 2722 713194018 713193573 0.000000e+00 802.0
28 TraesCS7B01G474600 chr2A 98.884 448 2 3 2276 2723 384334330 384333886 0.000000e+00 797.0
29 TraesCS7B01G474600 chr1B 99.323 443 2 1 2276 2718 255507338 255507779 0.000000e+00 800.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G474600 chr7B 730816072 730818947 2875 True 5312.000000 5312 100.000000 1 2876 1 chr7B.!!$R1 2875
1 TraesCS7B01G474600 chr7D 628210573 628212985 2412 False 1483.500000 2680 93.169500 77 2876 2 chr7D.!!$F1 2799
2 TraesCS7B01G474600 chr7A 724965720 724968222 2502 True 954.000000 2126 93.524000 43 2876 3 chr7A.!!$R2 2833
3 TraesCS7B01G474600 chr3D 29705001 29706562 1561 False 434.650000 1009 90.086000 985 2876 4 chr3D.!!$F1 1891
4 TraesCS7B01G474600 chr3B 50932425 50937880 5455 False 354.571429 1005 89.461714 989 2876 7 chr3B.!!$F2 1887
5 TraesCS7B01G474600 chr3A 40362740 40364281 1541 False 504.000000 1003 90.594667 973 2876 3 chr3A.!!$F1 1903

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 443 0.037232 CTGGGTCCGTTCCTCACTTC 60.037 60.0 0.0 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2335 6457 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.0 1.83 0.0 46.69 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 8.626917 TTACAACATATACCCTTTTCTCCCTA 57.373 34.615 0.00 0.00 0.00 3.53
100 101 3.167485 TGTTCTAACCCTATCACCACGT 58.833 45.455 0.00 0.00 0.00 4.49
119 120 1.338655 GTACGCATCTCTCCTTCCTCC 59.661 57.143 0.00 0.00 0.00 4.30
136 137 2.435693 CCTCTTCCGCCTCCCGAAT 61.436 63.158 0.00 0.00 40.02 3.34
138 139 1.676678 CTCTTCCGCCTCCCGAATCA 61.677 60.000 0.00 0.00 40.02 2.57
249 296 2.743928 CCTGTCGCCTGCAAGTCC 60.744 66.667 0.00 0.00 0.00 3.85
368 431 2.435059 GCGTCTCTTGCTGGGTCC 60.435 66.667 0.00 0.00 0.00 4.46
380 443 0.037232 CTGGGTCCGTTCCTCACTTC 60.037 60.000 0.00 0.00 0.00 3.01
390 453 3.251004 CGTTCCTCACTTCCCTTTCTTTG 59.749 47.826 0.00 0.00 0.00 2.77
396 459 2.030451 CACTTCCCTTTCTTTGCTGCTC 60.030 50.000 0.00 0.00 0.00 4.26
411 474 3.028130 GCTGCTCTCTCCTTACCTAGTT 58.972 50.000 0.00 0.00 0.00 2.24
459 545 2.435372 TGTGGGTTGCTTTCTTCAGT 57.565 45.000 0.00 0.00 0.00 3.41
547 640 3.747854 TGCTTGGAATGTGCAATGAAA 57.252 38.095 0.00 0.00 33.48 2.69
580 673 9.851686 ACAGGAACTATAATCATAGCAAATCAA 57.148 29.630 0.00 0.00 38.17 2.57
657 750 1.048601 ATCCGATAATCACCGGCTGT 58.951 50.000 0.00 0.00 44.96 4.40
671 764 1.901464 GCTGTTTTCGCCCTCCCAA 60.901 57.895 0.00 0.00 0.00 4.12
685 778 3.260632 CCCTCCCAACAACCTAAAAATGG 59.739 47.826 0.00 0.00 0.00 3.16
703 796 5.362556 AATGGAAGTTCAGATGTCAAACG 57.637 39.130 5.01 0.00 0.00 3.60
709 802 4.883083 AGTTCAGATGTCAAACGAAGCTA 58.117 39.130 0.00 0.00 0.00 3.32
730 823 5.107568 GCTAACTTTTCAGACTCGGTTACAC 60.108 44.000 0.00 0.00 0.00 2.90
731 824 4.667519 ACTTTTCAGACTCGGTTACACT 57.332 40.909 0.00 0.00 0.00 3.55
804 899 2.489751 GCCCACCGCAATGTTAGC 59.510 61.111 0.00 0.00 37.47 3.09
805 900 2.046285 GCCCACCGCAATGTTAGCT 61.046 57.895 0.00 0.00 37.47 3.32
806 901 1.802636 CCCACCGCAATGTTAGCTG 59.197 57.895 0.00 0.00 0.00 4.24
810 905 1.750399 CCGCAATGTTAGCTGGCCT 60.750 57.895 3.32 0.00 0.00 5.19
822 917 3.850098 CTGGCCTTGCACGGGAGTT 62.850 63.158 11.75 0.00 44.67 3.01
901 996 4.213270 TGGCAAGAAATTTGAGTACTCGTG 59.787 41.667 17.85 3.34 0.00 4.35
952 1048 1.392853 GTGCTTCTGCTTCATCTGTCG 59.607 52.381 0.00 0.00 40.48 4.35
966 1062 3.570926 TCTGTCGTTACTTGGCTACTG 57.429 47.619 0.00 0.00 0.00 2.74
1186 1283 1.268899 GTGTGAATCTGCAGCAAGCTT 59.731 47.619 9.47 0.00 45.94 3.74
1187 1284 1.958579 TGTGAATCTGCAGCAAGCTTT 59.041 42.857 9.47 0.00 45.94 3.51
1226 1323 4.830765 TGGCCGCGTGCTGGATAC 62.831 66.667 17.07 2.81 40.92 2.24
1244 1341 4.379174 TGCCGAAGCAGAGAAACC 57.621 55.556 0.00 0.00 46.52 3.27
1401 1501 4.100035 CCTGAGATGTACAAGGCATACTCA 59.900 45.833 0.00 6.07 33.69 3.41
1558 1658 2.045340 GGTGTGGCCGCCTAATGT 60.045 61.111 15.15 0.00 38.28 2.71
1615 1715 1.321474 CAGTGTGGCCAAGACATTGT 58.679 50.000 7.24 0.00 34.39 2.71
1783 1886 3.409026 AGGAAGAACAGGATCACACAC 57.591 47.619 0.00 0.00 0.00 3.82
1790 1893 3.032017 ACAGGATCACACACGAGAAAG 57.968 47.619 0.00 0.00 0.00 2.62
1928 5978 7.099120 GGTGTGCATTTTGGAAAGATTTCTAT 58.901 34.615 5.37 0.00 37.35 1.98
1929 5979 7.063780 GGTGTGCATTTTGGAAAGATTTCTATG 59.936 37.037 5.37 5.88 37.35 2.23
1960 6027 9.219603 GTGCATACATATATCCATACAACTGTT 57.780 33.333 0.00 0.00 0.00 3.16
2203 6320 5.300752 AGAACTGAAGGTACAATGTCTGTG 58.699 41.667 0.00 0.00 39.20 3.66
2294 6416 9.733556 TTATTATCATGTTCAACAGTTAGGTGT 57.266 29.630 0.00 0.00 35.97 4.16
2295 6417 5.947228 ATCATGTTCAACAGTTAGGTGTG 57.053 39.130 0.00 0.00 35.97 3.82
2296 6418 4.133820 TCATGTTCAACAGTTAGGTGTGG 58.866 43.478 0.00 0.00 35.97 4.17
2297 6419 2.294074 TGTTCAACAGTTAGGTGTGGC 58.706 47.619 0.00 0.00 35.97 5.01
2298 6420 1.263217 GTTCAACAGTTAGGTGTGGCG 59.737 52.381 0.00 0.00 35.97 5.69
2299 6421 0.250124 TCAACAGTTAGGTGTGGCGG 60.250 55.000 0.00 0.00 35.97 6.13
2300 6422 0.250124 CAACAGTTAGGTGTGGCGGA 60.250 55.000 0.00 0.00 0.00 5.54
2301 6423 0.034896 AACAGTTAGGTGTGGCGGAG 59.965 55.000 0.00 0.00 0.00 4.63
2302 6424 0.830444 ACAGTTAGGTGTGGCGGAGA 60.830 55.000 0.00 0.00 0.00 3.71
2303 6425 0.537188 CAGTTAGGTGTGGCGGAGAT 59.463 55.000 0.00 0.00 0.00 2.75
2304 6426 0.537188 AGTTAGGTGTGGCGGAGATG 59.463 55.000 0.00 0.00 0.00 2.90
2305 6427 1.090052 GTTAGGTGTGGCGGAGATGC 61.090 60.000 0.00 0.00 0.00 3.91
2306 6428 2.572095 TTAGGTGTGGCGGAGATGCG 62.572 60.000 0.00 0.00 35.06 4.73
2307 6429 4.760047 GGTGTGGCGGAGATGCGT 62.760 66.667 0.00 0.00 35.06 5.24
2308 6430 2.183300 GTGTGGCGGAGATGCGTA 59.817 61.111 0.00 0.00 35.06 4.42
2309 6431 1.227263 GTGTGGCGGAGATGCGTAT 60.227 57.895 0.00 0.00 35.06 3.06
2310 6432 1.227234 TGTGGCGGAGATGCGTATG 60.227 57.895 0.00 0.00 35.06 2.39
2311 6433 1.227263 GTGGCGGAGATGCGTATGT 60.227 57.895 0.00 0.00 35.06 2.29
2312 6434 0.810031 GTGGCGGAGATGCGTATGTT 60.810 55.000 0.00 0.00 35.06 2.71
2313 6435 0.809636 TGGCGGAGATGCGTATGTTG 60.810 55.000 0.00 0.00 35.06 3.33
2314 6436 0.529773 GGCGGAGATGCGTATGTTGA 60.530 55.000 0.00 0.00 35.06 3.18
2315 6437 0.855349 GCGGAGATGCGTATGTTGAG 59.145 55.000 0.00 0.00 0.00 3.02
2316 6438 1.536072 GCGGAGATGCGTATGTTGAGA 60.536 52.381 0.00 0.00 0.00 3.27
2317 6439 2.864097 GCGGAGATGCGTATGTTGAGAT 60.864 50.000 0.00 0.00 0.00 2.75
2318 6440 2.728318 CGGAGATGCGTATGTTGAGATG 59.272 50.000 0.00 0.00 0.00 2.90
2319 6441 3.062763 GGAGATGCGTATGTTGAGATGG 58.937 50.000 0.00 0.00 0.00 3.51
2320 6442 3.243873 GGAGATGCGTATGTTGAGATGGA 60.244 47.826 0.00 0.00 0.00 3.41
2321 6443 4.562347 GGAGATGCGTATGTTGAGATGGAT 60.562 45.833 0.00 0.00 0.00 3.41
2322 6444 4.313282 AGATGCGTATGTTGAGATGGATG 58.687 43.478 0.00 0.00 0.00 3.51
2323 6445 3.541996 TGCGTATGTTGAGATGGATGT 57.458 42.857 0.00 0.00 0.00 3.06
2324 6446 3.197265 TGCGTATGTTGAGATGGATGTG 58.803 45.455 0.00 0.00 0.00 3.21
2325 6447 3.198068 GCGTATGTTGAGATGGATGTGT 58.802 45.455 0.00 0.00 0.00 3.72
2326 6448 3.001634 GCGTATGTTGAGATGGATGTGTG 59.998 47.826 0.00 0.00 0.00 3.82
2327 6449 3.557185 CGTATGTTGAGATGGATGTGTGG 59.443 47.826 0.00 0.00 0.00 4.17
2328 6450 1.825090 TGTTGAGATGGATGTGTGGC 58.175 50.000 0.00 0.00 0.00 5.01
2329 6451 1.098050 GTTGAGATGGATGTGTGGCC 58.902 55.000 0.00 0.00 0.00 5.36
2330 6452 0.697658 TTGAGATGGATGTGTGGCCA 59.302 50.000 0.00 0.00 38.78 5.36
2331 6453 0.035152 TGAGATGGATGTGTGGCCAC 60.035 55.000 29.67 29.67 42.19 5.01
2341 6463 2.358737 GTGGCCACACGAGGAAGG 60.359 66.667 31.23 0.00 37.94 3.46
2342 6464 2.525629 TGGCCACACGAGGAAGGA 60.526 61.111 0.00 0.00 0.00 3.36
2343 6465 1.918293 TGGCCACACGAGGAAGGAT 60.918 57.895 0.00 0.00 0.00 3.24
2344 6466 1.153349 GGCCACACGAGGAAGGATC 60.153 63.158 0.00 0.00 0.00 3.36
2345 6467 1.519455 GCCACACGAGGAAGGATCG 60.519 63.158 0.00 0.00 45.54 3.69
2346 6468 1.945354 GCCACACGAGGAAGGATCGA 61.945 60.000 1.94 0.00 42.76 3.59
2347 6469 0.101399 CCACACGAGGAAGGATCGAG 59.899 60.000 1.94 0.00 42.76 4.04
2348 6470 0.811915 CACACGAGGAAGGATCGAGT 59.188 55.000 1.94 0.00 43.22 4.18
2349 6471 1.096416 ACACGAGGAAGGATCGAGTC 58.904 55.000 1.94 0.00 39.27 3.36
2359 6481 2.071688 GGATCGAGTCCGGAATGATG 57.928 55.000 10.26 0.00 37.23 3.07
2360 6482 1.613925 GGATCGAGTCCGGAATGATGA 59.386 52.381 10.26 4.67 37.23 2.92
2361 6483 2.232452 GGATCGAGTCCGGAATGATGAT 59.768 50.000 10.26 9.95 37.23 2.45
2362 6484 3.444034 GGATCGAGTCCGGAATGATGATA 59.556 47.826 10.26 0.00 37.23 2.15
2363 6485 4.098654 GGATCGAGTCCGGAATGATGATAT 59.901 45.833 10.26 0.00 37.23 1.63
2364 6486 5.299531 GGATCGAGTCCGGAATGATGATATA 59.700 44.000 10.26 0.00 37.23 0.86
2365 6487 5.562506 TCGAGTCCGGAATGATGATATAC 57.437 43.478 10.26 0.00 36.24 1.47
2366 6488 4.094442 TCGAGTCCGGAATGATGATATACG 59.906 45.833 10.26 2.94 36.24 3.06
2367 6489 4.094442 CGAGTCCGGAATGATGATATACGA 59.906 45.833 10.26 0.00 0.00 3.43
2368 6490 5.568685 AGTCCGGAATGATGATATACGAG 57.431 43.478 5.23 0.00 0.00 4.18
2369 6491 5.254115 AGTCCGGAATGATGATATACGAGA 58.746 41.667 5.23 0.00 0.00 4.04
2370 6492 5.888724 AGTCCGGAATGATGATATACGAGAT 59.111 40.000 5.23 0.00 0.00 2.75
2371 6493 7.054751 AGTCCGGAATGATGATATACGAGATA 58.945 38.462 5.23 0.00 0.00 1.98
2372 6494 7.556635 AGTCCGGAATGATGATATACGAGATAA 59.443 37.037 5.23 0.00 0.00 1.75
2373 6495 8.188799 GTCCGGAATGATGATATACGAGATAAA 58.811 37.037 5.23 0.00 0.00 1.40
2374 6496 8.406297 TCCGGAATGATGATATACGAGATAAAG 58.594 37.037 0.00 0.00 0.00 1.85
2375 6497 8.191446 CCGGAATGATGATATACGAGATAAAGT 58.809 37.037 0.00 0.00 0.00 2.66
2376 6498 9.574458 CGGAATGATGATATACGAGATAAAGTT 57.426 33.333 0.00 0.00 0.00 2.66
2379 6501 9.658799 AATGATGATATACGAGATAAAGTTGGG 57.341 33.333 0.00 0.00 0.00 4.12
2380 6502 7.611770 TGATGATATACGAGATAAAGTTGGGG 58.388 38.462 0.00 0.00 0.00 4.96
2381 6503 6.989155 TGATATACGAGATAAAGTTGGGGT 57.011 37.500 0.00 0.00 0.00 4.95
2382 6504 8.660295 ATGATATACGAGATAAAGTTGGGGTA 57.340 34.615 0.00 0.00 0.00 3.69
2383 6505 8.118976 TGATATACGAGATAAAGTTGGGGTAG 57.881 38.462 0.00 0.00 0.00 3.18
2384 6506 3.538634 ACGAGATAAAGTTGGGGTAGC 57.461 47.619 0.00 0.00 0.00 3.58
2385 6507 2.835764 ACGAGATAAAGTTGGGGTAGCA 59.164 45.455 0.00 0.00 0.00 3.49
2386 6508 3.195661 CGAGATAAAGTTGGGGTAGCAC 58.804 50.000 0.00 0.00 0.00 4.40
2387 6509 3.542648 GAGATAAAGTTGGGGTAGCACC 58.457 50.000 0.00 0.00 37.60 5.01
2388 6510 2.916934 AGATAAAGTTGGGGTAGCACCA 59.083 45.455 7.49 0.00 41.02 4.17
2389 6511 3.332485 AGATAAAGTTGGGGTAGCACCAA 59.668 43.478 9.86 9.86 45.25 3.67
2394 6516 2.214376 TTGGGGTAGCACCAATTGAG 57.786 50.000 7.12 0.00 42.75 3.02
2395 6517 0.331278 TGGGGTAGCACCAATTGAGG 59.669 55.000 7.12 0.00 41.02 3.86
2396 6518 0.623723 GGGGTAGCACCAATTGAGGA 59.376 55.000 7.12 0.00 41.02 3.71
2397 6519 1.408822 GGGGTAGCACCAATTGAGGAG 60.409 57.143 7.12 0.00 41.02 3.69
2398 6520 1.559682 GGGTAGCACCAATTGAGGAGA 59.440 52.381 7.12 0.00 41.02 3.71
2399 6521 2.026262 GGGTAGCACCAATTGAGGAGAA 60.026 50.000 7.12 0.00 41.02 2.87
2400 6522 3.274288 GGTAGCACCAATTGAGGAGAAG 58.726 50.000 7.12 0.00 38.42 2.85
2401 6523 1.831580 AGCACCAATTGAGGAGAAGC 58.168 50.000 7.12 0.92 0.00 3.86
2402 6524 1.353694 AGCACCAATTGAGGAGAAGCT 59.646 47.619 7.12 3.13 0.00 3.74
2403 6525 2.165998 GCACCAATTGAGGAGAAGCTT 58.834 47.619 7.12 0.00 0.00 3.74
2404 6526 2.094854 GCACCAATTGAGGAGAAGCTTG 60.095 50.000 2.10 0.00 0.00 4.01
2405 6527 3.152341 CACCAATTGAGGAGAAGCTTGT 58.848 45.455 2.10 0.00 0.00 3.16
2406 6528 3.190118 CACCAATTGAGGAGAAGCTTGTC 59.810 47.826 15.04 15.04 0.00 3.18
2407 6529 2.751806 CCAATTGAGGAGAAGCTTGTCC 59.248 50.000 30.49 30.49 40.72 4.02
2408 6530 3.415212 CAATTGAGGAGAAGCTTGTCCA 58.585 45.455 36.25 21.34 42.72 4.02
2409 6531 3.795688 ATTGAGGAGAAGCTTGTCCAA 57.204 42.857 36.25 25.72 42.72 3.53
2410 6532 2.550830 TGAGGAGAAGCTTGTCCAAC 57.449 50.000 36.25 29.11 42.72 3.77
2411 6533 1.768275 TGAGGAGAAGCTTGTCCAACA 59.232 47.619 36.25 30.84 42.72 3.33
2412 6534 2.373169 TGAGGAGAAGCTTGTCCAACAT 59.627 45.455 36.25 20.88 42.72 2.71
2413 6535 3.006247 GAGGAGAAGCTTGTCCAACATC 58.994 50.000 36.25 24.18 42.72 3.06
2414 6536 1.734465 GGAGAAGCTTGTCCAACATCG 59.266 52.381 32.06 0.00 40.18 3.84
2415 6537 2.417719 GAGAAGCTTGTCCAACATCGT 58.582 47.619 12.50 0.00 0.00 3.73
2416 6538 2.808543 GAGAAGCTTGTCCAACATCGTT 59.191 45.455 12.50 0.00 0.00 3.85
2417 6539 3.214328 AGAAGCTTGTCCAACATCGTTT 58.786 40.909 2.10 0.00 0.00 3.60
2418 6540 3.003689 AGAAGCTTGTCCAACATCGTTTG 59.996 43.478 2.10 0.00 0.00 2.93
2419 6541 2.571212 AGCTTGTCCAACATCGTTTGA 58.429 42.857 0.00 0.00 0.00 2.69
2420 6542 2.549754 AGCTTGTCCAACATCGTTTGAG 59.450 45.455 0.00 0.00 0.00 3.02
2421 6543 2.548057 GCTTGTCCAACATCGTTTGAGA 59.452 45.455 0.00 0.00 0.00 3.27
2422 6544 3.189287 GCTTGTCCAACATCGTTTGAGAT 59.811 43.478 0.00 0.00 0.00 2.75
2426 6548 3.502211 GTCCAACATCGTTTGAGATGGTT 59.498 43.478 11.06 1.84 45.46 3.67
2427 6549 4.023193 GTCCAACATCGTTTGAGATGGTTT 60.023 41.667 11.06 0.00 45.46 3.27
2428 6550 4.023279 TCCAACATCGTTTGAGATGGTTTG 60.023 41.667 11.06 7.37 45.46 2.93
2429 6551 4.229096 CAACATCGTTTGAGATGGTTTGG 58.771 43.478 11.06 0.00 45.46 3.28
2430 6552 3.255642 AACATCGTTTGAGATGGTTTGGG 59.744 43.478 11.06 0.00 45.46 4.12
2431 6553 1.243902 TCGTTTGAGATGGTTTGGGC 58.756 50.000 0.00 0.00 0.00 5.36
2432 6554 0.958091 CGTTTGAGATGGTTTGGGCA 59.042 50.000 0.00 0.00 0.00 5.36
2433 6555 1.545582 CGTTTGAGATGGTTTGGGCAT 59.454 47.619 0.00 0.00 0.00 4.40
2434 6556 2.752354 CGTTTGAGATGGTTTGGGCATA 59.248 45.455 0.00 0.00 0.00 3.14
2435 6557 3.381272 CGTTTGAGATGGTTTGGGCATAT 59.619 43.478 0.00 0.00 0.00 1.78
2436 6558 4.142182 CGTTTGAGATGGTTTGGGCATATT 60.142 41.667 0.00 0.00 0.00 1.28
2437 6559 5.351458 GTTTGAGATGGTTTGGGCATATTC 58.649 41.667 0.00 0.00 0.00 1.75
2438 6560 4.248174 TGAGATGGTTTGGGCATATTCA 57.752 40.909 0.00 0.00 0.00 2.57
2439 6561 4.209538 TGAGATGGTTTGGGCATATTCAG 58.790 43.478 0.00 0.00 0.00 3.02
2440 6562 2.961062 AGATGGTTTGGGCATATTCAGC 59.039 45.455 0.00 0.00 0.00 4.26
2441 6563 1.102154 TGGTTTGGGCATATTCAGCG 58.898 50.000 0.00 0.00 0.00 5.18
2442 6564 0.249031 GGTTTGGGCATATTCAGCGC 60.249 55.000 0.00 0.00 44.24 5.92
2445 6567 3.348236 GGGCATATTCAGCGCAGG 58.652 61.111 11.47 0.20 43.54 4.85
2446 6568 2.641559 GGCATATTCAGCGCAGGC 59.358 61.111 11.47 0.29 40.37 4.85
2447 6569 2.641559 GCATATTCAGCGCAGGCC 59.358 61.111 11.47 0.00 41.24 5.19
2448 6570 1.895707 GCATATTCAGCGCAGGCCT 60.896 57.895 11.47 0.00 41.24 5.19
2449 6571 1.849976 GCATATTCAGCGCAGGCCTC 61.850 60.000 11.47 0.00 41.24 4.70
2450 6572 1.072159 ATATTCAGCGCAGGCCTCC 59.928 57.895 11.47 0.00 41.24 4.30
2451 6573 1.699054 ATATTCAGCGCAGGCCTCCA 61.699 55.000 11.47 0.00 41.24 3.86
2452 6574 2.315781 TATTCAGCGCAGGCCTCCAG 62.316 60.000 11.47 0.00 41.24 3.86
2454 6576 4.399395 CAGCGCAGGCCTCCAGAA 62.399 66.667 11.47 0.00 41.24 3.02
2455 6577 4.093291 AGCGCAGGCCTCCAGAAG 62.093 66.667 11.47 0.00 41.24 2.85
2457 6579 4.093291 CGCAGGCCTCCAGAAGCT 62.093 66.667 0.00 0.00 0.00 3.74
2458 6580 2.124778 GCAGGCCTCCAGAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
2459 6581 2.588989 CAGGCCTCCAGAAGCTCC 59.411 66.667 0.00 0.00 0.00 4.70
2460 6582 2.123632 AGGCCTCCAGAAGCTCCA 59.876 61.111 0.00 0.00 0.00 3.86
2461 6583 1.994507 AGGCCTCCAGAAGCTCCAG 60.995 63.158 0.00 0.00 0.00 3.86
2462 6584 2.297129 GGCCTCCAGAAGCTCCAGT 61.297 63.158 0.00 0.00 0.00 4.00
2463 6585 1.078567 GCCTCCAGAAGCTCCAGTG 60.079 63.158 0.00 0.00 0.00 3.66
2464 6586 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
2465 6587 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
2466 6588 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
2467 6589 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
2468 6590 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
2469 6591 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
2470 6592 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
2471 6593 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
2472 6594 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
2473 6595 1.884926 GCTCCAGTGCATAGCGGAC 60.885 63.158 0.00 0.00 35.88 4.79
2474 6596 1.589993 CTCCAGTGCATAGCGGACG 60.590 63.158 0.00 0.00 41.69 4.79
2475 6597 2.586079 CCAGTGCATAGCGGACGG 60.586 66.667 0.00 0.00 41.69 4.79
2476 6598 3.264897 CAGTGCATAGCGGACGGC 61.265 66.667 0.00 0.00 41.69 5.68
2485 6607 3.849953 GCGGACGGCTAAAGCGTG 61.850 66.667 0.00 0.00 43.26 5.34
2486 6608 3.849953 CGGACGGCTAAAGCGTGC 61.850 66.667 0.00 0.00 43.26 5.34
2487 6609 3.849953 GGACGGCTAAAGCGTGCG 61.850 66.667 0.00 1.74 43.26 5.34
2488 6610 3.849953 GACGGCTAAAGCGTGCGG 61.850 66.667 0.00 0.00 43.26 5.69
2489 6611 4.367023 ACGGCTAAAGCGTGCGGA 62.367 61.111 0.00 0.00 43.26 5.54
2490 6612 3.554692 CGGCTAAAGCGTGCGGAG 61.555 66.667 0.00 0.00 43.26 4.63
2491 6613 2.125673 GGCTAAAGCGTGCGGAGA 60.126 61.111 0.00 0.00 43.26 3.71
2492 6614 1.740296 GGCTAAAGCGTGCGGAGAA 60.740 57.895 0.00 0.00 43.26 2.87
2493 6615 1.090052 GGCTAAAGCGTGCGGAGAAT 61.090 55.000 0.00 0.00 43.26 2.40
2494 6616 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.00 0.00 0.00 2.67
2495 6617 1.359848 CTAAAGCGTGCGGAGAATGT 58.640 50.000 0.00 0.00 0.00 2.71
2496 6618 1.324736 CTAAAGCGTGCGGAGAATGTC 59.675 52.381 0.00 0.00 0.00 3.06
2497 6619 0.602638 AAAGCGTGCGGAGAATGTCA 60.603 50.000 0.00 0.00 0.00 3.58
2498 6620 0.602638 AAGCGTGCGGAGAATGTCAA 60.603 50.000 0.00 0.00 0.00 3.18
2499 6621 1.016130 AGCGTGCGGAGAATGTCAAG 61.016 55.000 0.00 0.00 0.00 3.02
2500 6622 1.014044 GCGTGCGGAGAATGTCAAGA 61.014 55.000 0.00 0.00 0.00 3.02
2501 6623 0.994995 CGTGCGGAGAATGTCAAGAG 59.005 55.000 0.00 0.00 0.00 2.85
2502 6624 1.402852 CGTGCGGAGAATGTCAAGAGA 60.403 52.381 0.00 0.00 0.00 3.10
2503 6625 2.266554 GTGCGGAGAATGTCAAGAGAG 58.733 52.381 0.00 0.00 0.00 3.20
2504 6626 1.205655 TGCGGAGAATGTCAAGAGAGG 59.794 52.381 0.00 0.00 0.00 3.69
2505 6627 1.472376 GCGGAGAATGTCAAGAGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
2506 6628 1.472376 CGGAGAATGTCAAGAGAGGGC 60.472 57.143 0.00 0.00 0.00 5.19
2507 6629 1.472376 GGAGAATGTCAAGAGAGGGCG 60.472 57.143 0.00 0.00 0.00 6.13
2508 6630 0.539051 AGAATGTCAAGAGAGGGCGG 59.461 55.000 0.00 0.00 0.00 6.13
2509 6631 0.462759 GAATGTCAAGAGAGGGCGGG 60.463 60.000 0.00 0.00 0.00 6.13
2510 6632 1.915078 AATGTCAAGAGAGGGCGGGG 61.915 60.000 0.00 0.00 0.00 5.73
2511 6633 3.003763 GTCAAGAGAGGGCGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
2512 6634 2.683933 TCAAGAGAGGGCGGGGTC 60.684 66.667 0.00 0.00 0.00 4.46
2513 6635 4.148825 CAAGAGAGGGCGGGGTCG 62.149 72.222 0.00 0.00 39.81 4.79
2514 6636 4.377760 AAGAGAGGGCGGGGTCGA 62.378 66.667 0.00 0.00 39.00 4.20
2525 6647 2.463592 GGGGTCGACCGATTTTGAC 58.536 57.895 27.68 11.35 41.60 3.18
2526 6648 0.320946 GGGGTCGACCGATTTTGACA 60.321 55.000 27.68 0.00 41.60 3.58
2527 6649 1.677820 GGGGTCGACCGATTTTGACAT 60.678 52.381 27.68 0.00 41.60 3.06
2528 6650 1.396996 GGGTCGACCGATTTTGACATG 59.603 52.381 27.68 0.00 36.71 3.21
2529 6651 1.396996 GGTCGACCGATTTTGACATGG 59.603 52.381 20.85 0.00 32.13 3.66
2530 6652 1.396996 GTCGACCGATTTTGACATGGG 59.603 52.381 3.51 0.00 31.01 4.00
2531 6653 1.276705 TCGACCGATTTTGACATGGGA 59.723 47.619 0.00 0.00 0.00 4.37
2532 6654 1.665679 CGACCGATTTTGACATGGGAG 59.334 52.381 0.00 0.00 0.00 4.30
2533 6655 2.017049 GACCGATTTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
2534 6656 1.633432 ACCGATTTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
2535 6657 2.292267 CCGATTTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
2536 6658 2.356125 CCGATTTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
2537 6659 2.939103 CGATTTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
2538 6660 2.879103 TTTTGACATGGGAGGAGTCC 57.121 50.000 0.00 0.00 43.05 3.85
2539 6661 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
2540 6662 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
2541 6663 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
2542 6664 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
2543 6665 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
2544 6666 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
2545 6667 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
2546 6668 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
2547 6669 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
2548 6670 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
2549 6671 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
2550 6672 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
2551 6673 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
2552 6674 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
2553 6675 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
2554 6676 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
2555 6677 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
2556 6678 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
2557 6679 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
2558 6680 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
2559 6681 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
2560 6682 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
2561 6683 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
2562 6684 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
2563 6685 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
2564 6686 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
2565 6687 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
2566 6688 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
2567 6689 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
2568 6690 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
2569 6691 3.639094 AGACCTGAAGGATTGGAGTATCG 59.361 47.826 2.62 0.00 38.94 2.92
2570 6692 3.637229 GACCTGAAGGATTGGAGTATCGA 59.363 47.826 2.62 0.00 38.94 3.59
2571 6693 3.385111 ACCTGAAGGATTGGAGTATCGAC 59.615 47.826 2.62 0.00 38.94 4.20
2572 6694 3.384789 CCTGAAGGATTGGAGTATCGACA 59.615 47.826 0.00 0.00 37.39 4.35
2573 6695 4.141937 CCTGAAGGATTGGAGTATCGACAA 60.142 45.833 0.00 0.00 37.39 3.18
2574 6696 5.414789 TGAAGGATTGGAGTATCGACAAA 57.585 39.130 0.00 0.00 34.37 2.83
2575 6697 5.419542 TGAAGGATTGGAGTATCGACAAAG 58.580 41.667 0.00 0.00 34.37 2.77
2576 6698 5.186992 TGAAGGATTGGAGTATCGACAAAGA 59.813 40.000 0.00 0.00 34.37 2.52
2577 6699 5.269505 AGGATTGGAGTATCGACAAAGAG 57.730 43.478 0.00 0.00 34.37 2.85
2578 6700 3.804873 GGATTGGAGTATCGACAAAGAGC 59.195 47.826 0.00 0.00 34.37 4.09
2579 6701 4.442192 GGATTGGAGTATCGACAAAGAGCT 60.442 45.833 0.00 0.00 34.37 4.09
2580 6702 5.221263 GGATTGGAGTATCGACAAAGAGCTA 60.221 44.000 0.00 0.00 34.37 3.32
2581 6703 4.902443 TGGAGTATCGACAAAGAGCTAG 57.098 45.455 0.00 0.00 34.37 3.42
2582 6704 3.066900 TGGAGTATCGACAAAGAGCTAGC 59.933 47.826 6.62 6.62 34.37 3.42
2583 6705 3.316868 GGAGTATCGACAAAGAGCTAGCT 59.683 47.826 19.45 19.45 34.37 3.32
2584 6706 4.515944 GGAGTATCGACAAAGAGCTAGCTA 59.484 45.833 19.38 0.00 34.37 3.32
2585 6707 5.182380 GGAGTATCGACAAAGAGCTAGCTAT 59.818 44.000 19.38 12.73 34.37 2.97
2586 6708 6.007936 AGTATCGACAAAGAGCTAGCTATG 57.992 41.667 19.38 18.66 0.00 2.23
2587 6709 3.717400 TCGACAAAGAGCTAGCTATGG 57.283 47.619 19.38 13.23 0.00 2.74
2588 6710 3.288092 TCGACAAAGAGCTAGCTATGGA 58.712 45.455 19.38 8.12 0.00 3.41
2589 6711 3.066900 TCGACAAAGAGCTAGCTATGGAC 59.933 47.826 19.38 10.10 0.00 4.02
2590 6712 3.181486 CGACAAAGAGCTAGCTATGGACA 60.181 47.826 19.38 0.00 0.00 4.02
2591 6713 4.367450 GACAAAGAGCTAGCTATGGACAG 58.633 47.826 19.38 6.25 0.00 3.51
2592 6714 3.133721 ACAAAGAGCTAGCTATGGACAGG 59.866 47.826 19.38 4.81 0.00 4.00
2593 6715 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
2594 6716 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
2595 6717 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
2596 6718 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
2597 6719 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
2598 6720 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
2599 6721 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2600 6722 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2601 6723 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
2603 6725 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2604 6726 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2605 6727 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2606 6728 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2607 6729 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2608 6730 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2609 6731 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2610 6732 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2611 6733 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2612 6734 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2613 6735 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2614 6736 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2615 6737 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2616 6738 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2617 6739 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2618 6740 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2619 6741 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2620 6742 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2621 6743 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2622 6744 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2623 6745 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2624 6746 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2625 6747 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2626 6748 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2627 6749 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2628 6750 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
2629 6751 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
2630 6752 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
2631 6753 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
2632 6754 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2633 6755 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2634 6756 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2635 6757 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2644 6766 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
2645 6767 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
2646 6768 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
2647 6769 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
2648 6770 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
2649 6771 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
2650 6772 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
2651 6773 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
2652 6774 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
2653 6775 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
2654 6776 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
2655 6777 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
2656 6778 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
2657 6779 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
2658 6780 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
2659 6781 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2660 6782 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2661 6783 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2662 6784 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2663 6785 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2664 6786 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2665 6787 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2666 6788 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2667 6789 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2668 6790 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2669 6791 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2670 6792 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2671 6793 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2672 6794 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2673 6795 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2674 6796 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2675 6797 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2676 6798 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2677 6799 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2678 6800 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2679 6801 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2680 6802 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2681 6803 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2682 6804 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2683 6805 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2694 6816 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2695 6817 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2696 6818 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2697 6819 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2698 6820 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2699 6821 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2700 6822 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2701 6823 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2702 6824 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2703 6825 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2704 6826 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2705 6827 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2706 6828 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2707 6829 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2708 6830 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2714 6840 7.945033 AAGGCTTTGTTGTTGTTGTTATATG 57.055 32.000 0.00 0.00 0.00 1.78
2748 6874 3.922910 TGACTTGAGCTGTCTCTGAATG 58.077 45.455 0.00 0.00 40.03 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.856162 AAAGGGTATATGTTGTAATTCGGTATT 57.144 29.630 0.00 0.00 0.00 1.89
24 25 9.856162 AAAAGGGTATATGTTGTAATTCGGTAT 57.144 29.630 0.00 0.00 0.00 2.73
25 26 9.328845 GAAAAGGGTATATGTTGTAATTCGGTA 57.671 33.333 0.00 0.00 0.00 4.02
26 27 8.050930 AGAAAAGGGTATATGTTGTAATTCGGT 58.949 33.333 0.00 0.00 0.00 4.69
27 28 8.446599 AGAAAAGGGTATATGTTGTAATTCGG 57.553 34.615 0.00 0.00 0.00 4.30
28 29 8.557029 GGAGAAAAGGGTATATGTTGTAATTCG 58.443 37.037 0.00 0.00 0.00 3.34
29 30 8.847196 GGGAGAAAAGGGTATATGTTGTAATTC 58.153 37.037 0.00 0.00 0.00 2.17
30 31 8.566109 AGGGAGAAAAGGGTATATGTTGTAATT 58.434 33.333 0.00 0.00 0.00 1.40
31 32 8.114301 AGGGAGAAAAGGGTATATGTTGTAAT 57.886 34.615 0.00 0.00 0.00 1.89
32 33 7.519347 AGGGAGAAAAGGGTATATGTTGTAA 57.481 36.000 0.00 0.00 0.00 2.41
33 34 8.626917 TTAGGGAGAAAAGGGTATATGTTGTA 57.373 34.615 0.00 0.00 0.00 2.41
34 35 7.519347 TTAGGGAGAAAAGGGTATATGTTGT 57.481 36.000 0.00 0.00 0.00 3.32
35 36 8.817092 TTTTAGGGAGAAAAGGGTATATGTTG 57.183 34.615 0.00 0.00 0.00 3.33
67 68 9.722184 GATAGGGTTAGAACAAAAGGGTATATC 57.278 37.037 0.00 0.00 0.00 1.63
80 81 3.881937 ACGTGGTGATAGGGTTAGAAC 57.118 47.619 0.00 0.00 0.00 3.01
100 101 1.215673 AGGAGGAAGGAGAGATGCGTA 59.784 52.381 0.00 0.00 0.00 4.42
119 120 1.068250 GATTCGGGAGGCGGAAGAG 59.932 63.158 0.00 0.00 0.00 2.85
207 249 2.185608 GGGGCGAGCAGAAGACTC 59.814 66.667 0.00 0.00 0.00 3.36
209 251 4.821589 CGGGGGCGAGCAGAAGAC 62.822 72.222 0.00 0.00 0.00 3.01
368 431 2.841442 AGAAAGGGAAGTGAGGAACG 57.159 50.000 0.00 0.00 0.00 3.95
380 443 2.083002 GAGAGAGCAGCAAAGAAAGGG 58.917 52.381 0.00 0.00 0.00 3.95
390 453 2.661718 ACTAGGTAAGGAGAGAGCAGC 58.338 52.381 0.00 0.00 0.00 5.25
411 474 1.002990 CTGCAGCCATGTGAGTGGA 60.003 57.895 0.00 0.00 42.02 4.02
459 545 6.529829 GCCGCATGATTTCTTTTGTACAAATA 59.470 34.615 21.17 10.36 0.00 1.40
503 589 8.879759 GCATAGAAACTAGTAGCATGTTGTAAA 58.120 33.333 0.00 0.00 0.00 2.01
504 590 8.258007 AGCATAGAAACTAGTAGCATGTTGTAA 58.742 33.333 0.00 0.00 0.00 2.41
513 599 6.763610 ACATTCCAAGCATAGAAACTAGTAGC 59.236 38.462 0.00 0.00 0.00 3.58
527 613 3.747854 TTTCATTGCACATTCCAAGCA 57.252 38.095 0.00 0.00 36.32 3.91
600 693 9.236006 ACACTGATAGCAATGAGTTAGATTTTT 57.764 29.630 0.00 0.00 25.46 1.94
601 694 8.798859 ACACTGATAGCAATGAGTTAGATTTT 57.201 30.769 0.00 0.00 25.46 1.82
602 695 8.043113 TGACACTGATAGCAATGAGTTAGATTT 58.957 33.333 0.00 0.00 25.46 2.17
603 696 7.559486 TGACACTGATAGCAATGAGTTAGATT 58.441 34.615 0.00 0.00 25.46 2.40
607 700 6.037500 GCATTGACACTGATAGCAATGAGTTA 59.962 38.462 16.01 0.00 46.37 2.24
657 750 1.110518 GGTTGTTGGGAGGGCGAAAA 61.111 55.000 0.00 0.00 0.00 2.29
671 764 7.287696 ACATCTGAACTTCCATTTTTAGGTTGT 59.712 33.333 0.00 0.00 0.00 3.32
685 778 4.212214 AGCTTCGTTTGACATCTGAACTTC 59.788 41.667 0.00 0.00 0.00 3.01
703 796 4.308265 ACCGAGTCTGAAAAGTTAGCTTC 58.692 43.478 0.00 0.00 33.01 3.86
709 802 5.019785 AGTGTAACCGAGTCTGAAAAGTT 57.980 39.130 0.00 0.00 37.80 2.66
767 860 2.485426 GCAGTACAGCTCAAATTGCAGA 59.515 45.455 2.52 0.00 0.00 4.26
804 899 3.850098 AACTCCCGTGCAAGGCCAG 62.850 63.158 13.88 13.02 0.00 4.85
805 900 3.842925 GAACTCCCGTGCAAGGCCA 62.843 63.158 13.88 0.61 0.00 5.36
806 901 3.056328 GAACTCCCGTGCAAGGCC 61.056 66.667 13.88 0.00 0.00 5.19
810 905 4.713946 GGATGAACTCCCGTGCAA 57.286 55.556 0.00 0.00 38.19 4.08
820 915 0.462759 CCGGCTCTCAAGGGATGAAC 60.463 60.000 0.00 0.00 37.67 3.18
822 917 2.735772 GCCGGCTCTCAAGGGATGA 61.736 63.158 22.15 0.00 36.38 2.92
849 944 1.021390 CCTCATGGTTCGTGCTCCAC 61.021 60.000 0.00 0.00 36.50 4.02
901 996 6.624423 TGTTAACTTGTACTCTATCCGGTTC 58.376 40.000 7.22 0.00 0.00 3.62
966 1062 5.696724 ACAGAAACAATACAGTGTCAGCTAC 59.303 40.000 0.00 0.00 0.00 3.58
1186 1283 2.038033 AGGCAGCACGGTTAAGAAGTAA 59.962 45.455 0.00 0.00 0.00 2.24
1187 1284 1.621814 AGGCAGCACGGTTAAGAAGTA 59.378 47.619 0.00 0.00 0.00 2.24
1215 1312 1.148157 CTTCGGCAGTATCCAGCACG 61.148 60.000 0.00 0.00 0.00 5.34
1244 1341 4.722700 CCCCCAGCTGGAACCACG 62.723 72.222 34.91 15.77 37.39 4.94
1401 1501 3.131933 CCCAGTTCTTCGATCTGAGATGT 59.868 47.826 0.00 0.00 32.85 3.06
1554 1654 3.117888 ACAGAAGGTCAGACCACAACATT 60.118 43.478 22.31 5.78 41.95 2.71
1556 1656 1.837439 ACAGAAGGTCAGACCACAACA 59.163 47.619 22.31 0.00 41.95 3.33
1558 1658 1.837439 ACACAGAAGGTCAGACCACAA 59.163 47.619 22.31 0.00 41.95 3.33
1615 1715 1.070758 GCTGGAGACTGTCAGAACCAA 59.929 52.381 10.88 0.00 33.11 3.67
1928 5978 8.547173 TGTATGGATATATGTATGCACCATTCA 58.453 33.333 5.82 6.83 40.76 2.57
1929 5979 8.962884 TGTATGGATATATGTATGCACCATTC 57.037 34.615 5.82 4.68 40.76 2.67
1973 6069 2.107204 ACAGAAAATGCCAGTCCAGAGT 59.893 45.455 0.00 0.00 0.00 3.24
2152 6269 5.621197 ACAGTAGATATCGACTCTGATGC 57.379 43.478 14.81 0.00 29.21 3.91
2203 6320 6.812656 CCTCTGTCTATGATCATACATGCTTC 59.187 42.308 11.49 0.00 0.00 3.86
2275 6397 3.304659 GCCACACCTAACTGTTGAACATG 60.305 47.826 0.00 0.00 0.00 3.21
2279 6401 1.588674 CGCCACACCTAACTGTTGAA 58.411 50.000 2.69 0.00 0.00 2.69
2280 6402 0.250124 CCGCCACACCTAACTGTTGA 60.250 55.000 2.69 0.00 0.00 3.18
2281 6403 0.250124 TCCGCCACACCTAACTGTTG 60.250 55.000 2.69 0.00 0.00 3.33
2282 6404 0.034896 CTCCGCCACACCTAACTGTT 59.965 55.000 0.00 0.00 0.00 3.16
2283 6405 0.830444 TCTCCGCCACACCTAACTGT 60.830 55.000 0.00 0.00 0.00 3.55
2284 6406 0.537188 ATCTCCGCCACACCTAACTG 59.463 55.000 0.00 0.00 0.00 3.16
2285 6407 0.537188 CATCTCCGCCACACCTAACT 59.463 55.000 0.00 0.00 0.00 2.24
2286 6408 1.090052 GCATCTCCGCCACACCTAAC 61.090 60.000 0.00 0.00 0.00 2.34
2287 6409 1.220749 GCATCTCCGCCACACCTAA 59.779 57.895 0.00 0.00 0.00 2.69
2288 6410 2.900273 GCATCTCCGCCACACCTA 59.100 61.111 0.00 0.00 0.00 3.08
2289 6411 4.457496 CGCATCTCCGCCACACCT 62.457 66.667 0.00 0.00 0.00 4.00
2290 6412 2.644555 ATACGCATCTCCGCCACACC 62.645 60.000 0.00 0.00 0.00 4.16
2291 6413 1.227263 ATACGCATCTCCGCCACAC 60.227 57.895 0.00 0.00 0.00 3.82
2292 6414 1.227234 CATACGCATCTCCGCCACA 60.227 57.895 0.00 0.00 0.00 4.17
2293 6415 0.810031 AACATACGCATCTCCGCCAC 60.810 55.000 0.00 0.00 0.00 5.01
2294 6416 0.809636 CAACATACGCATCTCCGCCA 60.810 55.000 0.00 0.00 0.00 5.69
2295 6417 0.529773 TCAACATACGCATCTCCGCC 60.530 55.000 0.00 0.00 0.00 6.13
2296 6418 0.855349 CTCAACATACGCATCTCCGC 59.145 55.000 0.00 0.00 0.00 5.54
2297 6419 2.492019 TCTCAACATACGCATCTCCG 57.508 50.000 0.00 0.00 0.00 4.63
2298 6420 3.062763 CCATCTCAACATACGCATCTCC 58.937 50.000 0.00 0.00 0.00 3.71
2299 6421 3.982475 TCCATCTCAACATACGCATCTC 58.018 45.455 0.00 0.00 0.00 2.75
2300 6422 4.202295 ACATCCATCTCAACATACGCATCT 60.202 41.667 0.00 0.00 0.00 2.90
2301 6423 4.060900 ACATCCATCTCAACATACGCATC 58.939 43.478 0.00 0.00 0.00 3.91
2302 6424 3.811497 CACATCCATCTCAACATACGCAT 59.189 43.478 0.00 0.00 0.00 4.73
2303 6425 3.197265 CACATCCATCTCAACATACGCA 58.803 45.455 0.00 0.00 0.00 5.24
2304 6426 3.001634 CACACATCCATCTCAACATACGC 59.998 47.826 0.00 0.00 0.00 4.42
2305 6427 3.557185 CCACACATCCATCTCAACATACG 59.443 47.826 0.00 0.00 0.00 3.06
2306 6428 3.313526 GCCACACATCCATCTCAACATAC 59.686 47.826 0.00 0.00 0.00 2.39
2307 6429 3.544684 GCCACACATCCATCTCAACATA 58.455 45.455 0.00 0.00 0.00 2.29
2308 6430 2.372264 GCCACACATCCATCTCAACAT 58.628 47.619 0.00 0.00 0.00 2.71
2309 6431 1.614051 GGCCACACATCCATCTCAACA 60.614 52.381 0.00 0.00 0.00 3.33
2310 6432 1.098050 GGCCACACATCCATCTCAAC 58.902 55.000 0.00 0.00 0.00 3.18
2311 6433 0.697658 TGGCCACACATCCATCTCAA 59.302 50.000 0.00 0.00 0.00 3.02
2312 6434 0.035152 GTGGCCACACATCCATCTCA 60.035 55.000 31.23 0.00 46.90 3.27
2313 6435 2.785868 GTGGCCACACATCCATCTC 58.214 57.895 31.23 0.00 46.90 2.75
2323 6445 2.425592 CTTCCTCGTGTGGCCACA 59.574 61.111 34.74 34.74 41.93 4.17
2324 6446 2.185310 ATCCTTCCTCGTGTGGCCAC 62.185 60.000 29.67 29.67 38.27 5.01
2325 6447 1.899437 GATCCTTCCTCGTGTGGCCA 61.899 60.000 0.00 0.00 0.00 5.36
2326 6448 1.153349 GATCCTTCCTCGTGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
2327 6449 1.519455 CGATCCTTCCTCGTGTGGC 60.519 63.158 0.00 0.00 0.00 5.01
2328 6450 0.101399 CTCGATCCTTCCTCGTGTGG 59.899 60.000 0.00 0.00 37.40 4.17
2329 6451 0.811915 ACTCGATCCTTCCTCGTGTG 59.188 55.000 0.34 0.00 40.21 3.82
2330 6452 1.096416 GACTCGATCCTTCCTCGTGT 58.904 55.000 0.70 0.70 43.19 4.49
2331 6453 0.382515 GGACTCGATCCTTCCTCGTG 59.617 60.000 6.63 0.00 45.22 4.35
2332 6454 1.096386 CGGACTCGATCCTTCCTCGT 61.096 60.000 10.77 0.00 46.69 4.18
2333 6455 1.649815 CGGACTCGATCCTTCCTCG 59.350 63.158 10.77 0.00 46.69 4.63
2334 6456 0.465824 TCCGGACTCGATCCTTCCTC 60.466 60.000 0.00 0.00 46.69 3.71
2335 6457 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.000 1.83 0.00 46.69 3.36
2336 6458 1.041437 ATTCCGGACTCGATCCTTCC 58.959 55.000 1.83 3.28 46.69 3.46
2337 6459 1.681793 TCATTCCGGACTCGATCCTTC 59.318 52.381 1.83 0.00 46.69 3.46
2338 6460 1.776662 TCATTCCGGACTCGATCCTT 58.223 50.000 1.83 0.00 46.69 3.36
2339 6461 1.615883 CATCATTCCGGACTCGATCCT 59.384 52.381 1.83 0.00 46.69 3.24
2340 6462 1.613925 TCATCATTCCGGACTCGATCC 59.386 52.381 1.83 4.37 45.20 3.36
2341 6463 3.584406 ATCATCATTCCGGACTCGATC 57.416 47.619 1.83 0.00 39.00 3.69
2342 6464 5.220873 CGTATATCATCATTCCGGACTCGAT 60.221 44.000 1.83 3.28 39.00 3.59
2343 6465 4.094442 CGTATATCATCATTCCGGACTCGA 59.906 45.833 1.83 0.34 39.00 4.04
2344 6466 4.094442 TCGTATATCATCATTCCGGACTCG 59.906 45.833 1.83 0.00 0.00 4.18
2345 6467 5.354513 TCTCGTATATCATCATTCCGGACTC 59.645 44.000 1.83 0.00 0.00 3.36
2346 6468 5.254115 TCTCGTATATCATCATTCCGGACT 58.746 41.667 1.83 0.00 0.00 3.85
2347 6469 5.562506 TCTCGTATATCATCATTCCGGAC 57.437 43.478 1.83 0.00 0.00 4.79
2348 6470 7.875327 TTATCTCGTATATCATCATTCCGGA 57.125 36.000 0.00 0.00 0.00 5.14
2349 6471 8.191446 ACTTTATCTCGTATATCATCATTCCGG 58.809 37.037 0.00 0.00 0.00 5.14
2350 6472 9.574458 AACTTTATCTCGTATATCATCATTCCG 57.426 33.333 0.00 0.00 0.00 4.30
2353 6475 9.658799 CCCAACTTTATCTCGTATATCATCATT 57.341 33.333 0.00 0.00 0.00 2.57
2354 6476 8.260818 CCCCAACTTTATCTCGTATATCATCAT 58.739 37.037 0.00 0.00 0.00 2.45
2355 6477 7.234782 ACCCCAACTTTATCTCGTATATCATCA 59.765 37.037 0.00 0.00 0.00 3.07
2356 6478 7.612677 ACCCCAACTTTATCTCGTATATCATC 58.387 38.462 0.00 0.00 0.00 2.92
2357 6479 7.554959 ACCCCAACTTTATCTCGTATATCAT 57.445 36.000 0.00 0.00 0.00 2.45
2358 6480 6.989155 ACCCCAACTTTATCTCGTATATCA 57.011 37.500 0.00 0.00 0.00 2.15
2359 6481 7.034397 GCTACCCCAACTTTATCTCGTATATC 58.966 42.308 0.00 0.00 0.00 1.63
2360 6482 6.495872 TGCTACCCCAACTTTATCTCGTATAT 59.504 38.462 0.00 0.00 0.00 0.86
2361 6483 5.834742 TGCTACCCCAACTTTATCTCGTATA 59.165 40.000 0.00 0.00 0.00 1.47
2362 6484 4.652421 TGCTACCCCAACTTTATCTCGTAT 59.348 41.667 0.00 0.00 0.00 3.06
2363 6485 4.025360 TGCTACCCCAACTTTATCTCGTA 58.975 43.478 0.00 0.00 0.00 3.43
2364 6486 2.835764 TGCTACCCCAACTTTATCTCGT 59.164 45.455 0.00 0.00 0.00 4.18
2365 6487 3.195661 GTGCTACCCCAACTTTATCTCG 58.804 50.000 0.00 0.00 0.00 4.04
2366 6488 3.054655 TGGTGCTACCCCAACTTTATCTC 60.055 47.826 3.33 0.00 37.50 2.75
2367 6489 2.916934 TGGTGCTACCCCAACTTTATCT 59.083 45.455 3.33 0.00 37.50 1.98
2368 6490 3.359695 TGGTGCTACCCCAACTTTATC 57.640 47.619 3.33 0.00 37.50 1.75
2369 6491 3.818295 TTGGTGCTACCCCAACTTTAT 57.182 42.857 3.33 0.00 37.50 1.40
2370 6492 3.818295 ATTGGTGCTACCCCAACTTTA 57.182 42.857 0.00 0.00 44.36 1.85
2371 6493 2.632512 CAATTGGTGCTACCCCAACTTT 59.367 45.455 0.00 0.00 44.36 2.66
2372 6494 2.158385 TCAATTGGTGCTACCCCAACTT 60.158 45.455 5.42 0.00 44.36 2.66
2373 6495 1.427368 TCAATTGGTGCTACCCCAACT 59.573 47.619 5.42 0.00 44.36 3.16
2374 6496 1.818674 CTCAATTGGTGCTACCCCAAC 59.181 52.381 5.42 0.00 44.36 3.77
2375 6497 1.272425 CCTCAATTGGTGCTACCCCAA 60.272 52.381 5.42 0.00 45.55 4.12
2376 6498 0.331278 CCTCAATTGGTGCTACCCCA 59.669 55.000 5.42 0.00 37.50 4.96
2377 6499 0.623723 TCCTCAATTGGTGCTACCCC 59.376 55.000 5.42 0.00 37.50 4.95
2378 6500 1.559682 TCTCCTCAATTGGTGCTACCC 59.440 52.381 5.42 0.00 37.50 3.69
2379 6501 3.274288 CTTCTCCTCAATTGGTGCTACC 58.726 50.000 5.42 0.00 39.22 3.18
2380 6502 2.680339 GCTTCTCCTCAATTGGTGCTAC 59.320 50.000 5.42 0.00 0.00 3.58
2381 6503 2.573462 AGCTTCTCCTCAATTGGTGCTA 59.427 45.455 5.42 0.00 0.00 3.49
2382 6504 1.353694 AGCTTCTCCTCAATTGGTGCT 59.646 47.619 5.42 2.81 0.00 4.40
2383 6505 1.831580 AGCTTCTCCTCAATTGGTGC 58.168 50.000 5.42 0.62 0.00 5.01
2384 6506 3.152341 ACAAGCTTCTCCTCAATTGGTG 58.848 45.455 5.42 0.00 0.00 4.17
2385 6507 3.416156 GACAAGCTTCTCCTCAATTGGT 58.584 45.455 5.42 0.00 0.00 3.67
2386 6508 2.751806 GGACAAGCTTCTCCTCAATTGG 59.248 50.000 13.12 0.00 0.00 3.16
2387 6509 3.415212 TGGACAAGCTTCTCCTCAATTG 58.585 45.455 19.96 0.00 0.00 2.32
2388 6510 3.795688 TGGACAAGCTTCTCCTCAATT 57.204 42.857 19.96 0.00 0.00 2.32
2389 6511 3.181440 TGTTGGACAAGCTTCTCCTCAAT 60.181 43.478 19.96 0.00 0.00 2.57
2390 6512 2.172505 TGTTGGACAAGCTTCTCCTCAA 59.827 45.455 19.96 5.96 0.00 3.02
2391 6513 1.768275 TGTTGGACAAGCTTCTCCTCA 59.232 47.619 19.96 15.67 0.00 3.86
2392 6514 2.550830 TGTTGGACAAGCTTCTCCTC 57.449 50.000 19.96 13.65 0.00 3.71
2393 6515 2.613977 CGATGTTGGACAAGCTTCTCCT 60.614 50.000 19.96 1.39 0.00 3.69
2394 6516 1.734465 CGATGTTGGACAAGCTTCTCC 59.266 52.381 13.47 13.47 0.00 3.71
2395 6517 2.417719 ACGATGTTGGACAAGCTTCTC 58.582 47.619 0.00 0.00 0.00 2.87
2396 6518 2.550830 ACGATGTTGGACAAGCTTCT 57.449 45.000 0.00 0.00 0.00 2.85
2397 6519 3.003275 TCAAACGATGTTGGACAAGCTTC 59.997 43.478 0.00 0.00 0.00 3.86
2398 6520 2.948979 TCAAACGATGTTGGACAAGCTT 59.051 40.909 0.00 0.00 0.00 3.74
2399 6521 2.549754 CTCAAACGATGTTGGACAAGCT 59.450 45.455 0.00 0.00 0.00 3.74
2400 6522 2.548057 TCTCAAACGATGTTGGACAAGC 59.452 45.455 0.00 0.00 0.00 4.01
2401 6523 4.378770 CCATCTCAAACGATGTTGGACAAG 60.379 45.833 0.00 0.00 39.26 3.16
2402 6524 3.501828 CCATCTCAAACGATGTTGGACAA 59.498 43.478 0.00 0.00 39.26 3.18
2403 6525 3.073678 CCATCTCAAACGATGTTGGACA 58.926 45.455 0.00 0.00 39.26 4.02
2404 6526 3.074412 ACCATCTCAAACGATGTTGGAC 58.926 45.455 0.00 0.00 39.26 4.02
2405 6527 3.417069 ACCATCTCAAACGATGTTGGA 57.583 42.857 0.00 0.00 39.26 3.53
2406 6528 4.229096 CAAACCATCTCAAACGATGTTGG 58.771 43.478 0.00 0.70 39.26 3.77
2407 6529 4.229096 CCAAACCATCTCAAACGATGTTG 58.771 43.478 0.00 0.00 39.26 3.33
2408 6530 3.255642 CCCAAACCATCTCAAACGATGTT 59.744 43.478 0.00 0.00 39.26 2.71
2409 6531 2.819608 CCCAAACCATCTCAAACGATGT 59.180 45.455 0.00 0.00 39.26 3.06
2410 6532 2.415893 GCCCAAACCATCTCAAACGATG 60.416 50.000 0.00 0.00 40.32 3.84
2411 6533 1.818674 GCCCAAACCATCTCAAACGAT 59.181 47.619 0.00 0.00 0.00 3.73
2412 6534 1.243902 GCCCAAACCATCTCAAACGA 58.756 50.000 0.00 0.00 0.00 3.85
2413 6535 0.958091 TGCCCAAACCATCTCAAACG 59.042 50.000 0.00 0.00 0.00 3.60
2414 6536 5.105392 TGAATATGCCCAAACCATCTCAAAC 60.105 40.000 0.00 0.00 0.00 2.93
2415 6537 5.022122 TGAATATGCCCAAACCATCTCAAA 58.978 37.500 0.00 0.00 0.00 2.69
2416 6538 4.608269 TGAATATGCCCAAACCATCTCAA 58.392 39.130 0.00 0.00 0.00 3.02
2417 6539 4.209538 CTGAATATGCCCAAACCATCTCA 58.790 43.478 0.00 0.00 0.00 3.27
2418 6540 3.005155 GCTGAATATGCCCAAACCATCTC 59.995 47.826 0.00 0.00 0.00 2.75
2419 6541 2.961062 GCTGAATATGCCCAAACCATCT 59.039 45.455 0.00 0.00 0.00 2.90
2420 6542 2.287788 CGCTGAATATGCCCAAACCATC 60.288 50.000 0.00 0.00 0.00 3.51
2421 6543 1.682854 CGCTGAATATGCCCAAACCAT 59.317 47.619 0.00 0.00 0.00 3.55
2422 6544 1.102154 CGCTGAATATGCCCAAACCA 58.898 50.000 0.00 0.00 0.00 3.67
2423 6545 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
2424 6546 0.455410 TGCGCTGAATATGCCCAAAC 59.545 50.000 9.73 0.00 0.00 2.93
2425 6547 0.740149 CTGCGCTGAATATGCCCAAA 59.260 50.000 9.73 0.00 0.00 3.28
2426 6548 1.102809 CCTGCGCTGAATATGCCCAA 61.103 55.000 16.65 0.00 0.00 4.12
2427 6549 1.526686 CCTGCGCTGAATATGCCCA 60.527 57.895 16.65 0.00 0.00 5.36
2428 6550 2.912624 GCCTGCGCTGAATATGCCC 61.913 63.158 16.65 0.00 0.00 5.36
2429 6551 2.641559 GCCTGCGCTGAATATGCC 59.358 61.111 16.65 0.00 0.00 4.40
2430 6552 1.849976 GAGGCCTGCGCTGAATATGC 61.850 60.000 12.00 9.73 34.44 3.14
2431 6553 1.233285 GGAGGCCTGCGCTGAATATG 61.233 60.000 12.00 0.00 34.44 1.78
2432 6554 1.072159 GGAGGCCTGCGCTGAATAT 59.928 57.895 12.00 0.00 34.44 1.28
2433 6555 2.315781 CTGGAGGCCTGCGCTGAATA 62.316 60.000 20.39 0.00 34.44 1.75
2434 6556 3.694058 CTGGAGGCCTGCGCTGAAT 62.694 63.158 20.39 0.55 34.44 2.57
2435 6557 4.399395 CTGGAGGCCTGCGCTGAA 62.399 66.667 20.39 0.00 34.44 3.02
2437 6559 4.399395 TTCTGGAGGCCTGCGCTG 62.399 66.667 20.39 12.20 34.44 5.18
2438 6560 4.093291 CTTCTGGAGGCCTGCGCT 62.093 66.667 20.39 0.00 34.44 5.92
2440 6562 4.093291 AGCTTCTGGAGGCCTGCG 62.093 66.667 20.39 14.23 33.44 5.18
2441 6563 2.124778 GAGCTTCTGGAGGCCTGC 60.125 66.667 18.95 18.95 33.44 4.85
2442 6564 2.254737 CTGGAGCTTCTGGAGGCCTG 62.255 65.000 12.00 0.00 33.44 4.85
2443 6565 1.994507 CTGGAGCTTCTGGAGGCCT 60.995 63.158 3.86 3.86 33.44 5.19
2444 6566 2.297129 ACTGGAGCTTCTGGAGGCC 61.297 63.158 3.68 0.00 33.44 5.19
2445 6567 1.078567 CACTGGAGCTTCTGGAGGC 60.079 63.158 3.68 0.00 0.00 4.70
2446 6568 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
2447 6569 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
2448 6570 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
2449 6571 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
2450 6572 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
2451 6573 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
2452 6574 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
2453 6575 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
2454 6576 2.060383 TCCGCTATGCACTGGAGCT 61.060 57.895 9.31 0.00 33.91 4.09
2455 6577 1.884926 GTCCGCTATGCACTGGAGC 60.885 63.158 0.00 0.00 0.00 4.70
2456 6578 1.589993 CGTCCGCTATGCACTGGAG 60.590 63.158 0.00 0.00 0.00 3.86
2457 6579 2.494445 CGTCCGCTATGCACTGGA 59.506 61.111 0.00 0.00 0.00 3.86
2458 6580 2.586079 CCGTCCGCTATGCACTGG 60.586 66.667 0.00 0.00 0.00 4.00
2459 6581 3.264897 GCCGTCCGCTATGCACTG 61.265 66.667 0.00 0.00 0.00 3.66
2468 6590 3.849953 CACGCTTTAGCCGTCCGC 61.850 66.667 0.00 0.00 37.91 5.54
2469 6591 3.849953 GCACGCTTTAGCCGTCCG 61.850 66.667 0.00 0.00 37.91 4.79
2470 6592 3.849953 CGCACGCTTTAGCCGTCC 61.850 66.667 0.00 0.00 37.91 4.79
2471 6593 3.849953 CCGCACGCTTTAGCCGTC 61.850 66.667 0.00 0.00 37.91 4.79
2472 6594 4.367023 TCCGCACGCTTTAGCCGT 62.367 61.111 0.00 0.00 37.91 5.68
2473 6595 3.554692 CTCCGCACGCTTTAGCCG 61.555 66.667 0.00 0.00 37.91 5.52
2474 6596 1.090052 ATTCTCCGCACGCTTTAGCC 61.090 55.000 0.00 0.00 37.91 3.93
2475 6597 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.000 0.00 0.00 37.78 3.09
2476 6598 1.324736 GACATTCTCCGCACGCTTTAG 59.675 52.381 0.00 0.00 0.00 1.85
2477 6599 1.337354 TGACATTCTCCGCACGCTTTA 60.337 47.619 0.00 0.00 0.00 1.85
2478 6600 0.602638 TGACATTCTCCGCACGCTTT 60.603 50.000 0.00 0.00 0.00 3.51
2479 6601 0.602638 TTGACATTCTCCGCACGCTT 60.603 50.000 0.00 0.00 0.00 4.68
2480 6602 1.005037 TTGACATTCTCCGCACGCT 60.005 52.632 0.00 0.00 0.00 5.07
2481 6603 1.014044 TCTTGACATTCTCCGCACGC 61.014 55.000 0.00 0.00 0.00 5.34
2482 6604 0.994995 CTCTTGACATTCTCCGCACG 59.005 55.000 0.00 0.00 0.00 5.34
2483 6605 2.266554 CTCTCTTGACATTCTCCGCAC 58.733 52.381 0.00 0.00 0.00 5.34
2484 6606 1.205655 CCTCTCTTGACATTCTCCGCA 59.794 52.381 0.00 0.00 0.00 5.69
2485 6607 1.472376 CCCTCTCTTGACATTCTCCGC 60.472 57.143 0.00 0.00 0.00 5.54
2486 6608 1.472376 GCCCTCTCTTGACATTCTCCG 60.472 57.143 0.00 0.00 0.00 4.63
2487 6609 1.472376 CGCCCTCTCTTGACATTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
2488 6610 1.472376 CCGCCCTCTCTTGACATTCTC 60.472 57.143 0.00 0.00 0.00 2.87
2489 6611 0.539051 CCGCCCTCTCTTGACATTCT 59.461 55.000 0.00 0.00 0.00 2.40
2490 6612 0.462759 CCCGCCCTCTCTTGACATTC 60.463 60.000 0.00 0.00 0.00 2.67
2491 6613 1.604378 CCCGCCCTCTCTTGACATT 59.396 57.895 0.00 0.00 0.00 2.71
2492 6614 2.370445 CCCCGCCCTCTCTTGACAT 61.370 63.158 0.00 0.00 0.00 3.06
2493 6615 3.003173 CCCCGCCCTCTCTTGACA 61.003 66.667 0.00 0.00 0.00 3.58
2494 6616 3.003763 ACCCCGCCCTCTCTTGAC 61.004 66.667 0.00 0.00 0.00 3.18
2495 6617 2.683933 GACCCCGCCCTCTCTTGA 60.684 66.667 0.00 0.00 0.00 3.02
2496 6618 4.148825 CGACCCCGCCCTCTCTTG 62.149 72.222 0.00 0.00 0.00 3.02
2497 6619 4.377760 TCGACCCCGCCCTCTCTT 62.378 66.667 0.00 0.00 35.37 2.85
2507 6629 0.320946 TGTCAAAATCGGTCGACCCC 60.321 55.000 28.52 5.39 0.00 4.95
2508 6630 1.396996 CATGTCAAAATCGGTCGACCC 59.603 52.381 28.52 12.33 0.00 4.46
2509 6631 1.396996 CCATGTCAAAATCGGTCGACC 59.603 52.381 25.28 25.28 0.00 4.79
2510 6632 1.396996 CCCATGTCAAAATCGGTCGAC 59.603 52.381 7.13 7.13 0.00 4.20
2511 6633 1.276705 TCCCATGTCAAAATCGGTCGA 59.723 47.619 0.00 0.00 0.00 4.20
2512 6634 1.665679 CTCCCATGTCAAAATCGGTCG 59.334 52.381 0.00 0.00 0.00 4.79
2513 6635 2.017049 CCTCCCATGTCAAAATCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
2514 6636 1.633432 TCCTCCCATGTCAAAATCGGT 59.367 47.619 0.00 0.00 0.00 4.69
2515 6637 2.292267 CTCCTCCCATGTCAAAATCGG 58.708 52.381 0.00 0.00 0.00 4.18
2516 6638 2.939103 GACTCCTCCCATGTCAAAATCG 59.061 50.000 0.00 0.00 0.00 3.34
2517 6639 3.282885 GGACTCCTCCCATGTCAAAATC 58.717 50.000 0.00 0.00 32.84 2.17
2518 6640 2.356125 CGGACTCCTCCCATGTCAAAAT 60.356 50.000 0.00 0.00 31.93 1.82
2519 6641 1.003118 CGGACTCCTCCCATGTCAAAA 59.997 52.381 0.00 0.00 31.93 2.44
2520 6642 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
2521 6643 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
2522 6644 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
2523 6645 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
2524 6646 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
2525 6647 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
2526 6648 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
2527 6649 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
2528 6650 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
2529 6651 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
2530 6652 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
2531 6653 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
2532 6654 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
2533 6655 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
2534 6656 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
2535 6657 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
2536 6658 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
2537 6659 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
2538 6660 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
2539 6661 5.187967 TCCAATCCTTCAGGTCTCTCTTAAC 59.812 44.000 0.00 0.00 36.34 2.01
2540 6662 5.342017 TCCAATCCTTCAGGTCTCTCTTAA 58.658 41.667 0.00 0.00 36.34 1.85
2541 6663 4.947883 TCCAATCCTTCAGGTCTCTCTTA 58.052 43.478 0.00 0.00 36.34 2.10
2542 6664 3.774216 CTCCAATCCTTCAGGTCTCTCTT 59.226 47.826 0.00 0.00 36.34 2.85
2543 6665 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
2544 6666 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
2545 6667 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
2546 6668 4.261825 CGATACTCCAATCCTTCAGGTCTC 60.262 50.000 0.00 0.00 36.34 3.36
2547 6669 3.639094 CGATACTCCAATCCTTCAGGTCT 59.361 47.826 0.00 0.00 36.34 3.85
2548 6670 3.637229 TCGATACTCCAATCCTTCAGGTC 59.363 47.826 0.00 0.00 36.34 3.85
2549 6671 3.385111 GTCGATACTCCAATCCTTCAGGT 59.615 47.826 0.00 0.00 36.34 4.00
2550 6672 3.384789 TGTCGATACTCCAATCCTTCAGG 59.615 47.826 0.00 0.00 0.00 3.86
2551 6673 4.655762 TGTCGATACTCCAATCCTTCAG 57.344 45.455 0.00 0.00 0.00 3.02
2552 6674 5.186992 TCTTTGTCGATACTCCAATCCTTCA 59.813 40.000 0.00 0.00 0.00 3.02
2553 6675 5.661458 TCTTTGTCGATACTCCAATCCTTC 58.339 41.667 0.00 0.00 0.00 3.46
2554 6676 5.665459 CTCTTTGTCGATACTCCAATCCTT 58.335 41.667 0.00 0.00 0.00 3.36
2555 6677 4.442192 GCTCTTTGTCGATACTCCAATCCT 60.442 45.833 0.00 0.00 0.00 3.24
2556 6678 3.804873 GCTCTTTGTCGATACTCCAATCC 59.195 47.826 0.00 0.00 0.00 3.01
2557 6679 4.688021 AGCTCTTTGTCGATACTCCAATC 58.312 43.478 0.00 0.00 0.00 2.67
2558 6680 4.744795 AGCTCTTTGTCGATACTCCAAT 57.255 40.909 0.00 0.00 0.00 3.16
2559 6681 4.440250 GCTAGCTCTTTGTCGATACTCCAA 60.440 45.833 7.70 0.00 0.00 3.53
2560 6682 3.066900 GCTAGCTCTTTGTCGATACTCCA 59.933 47.826 7.70 0.00 0.00 3.86
2561 6683 3.316868 AGCTAGCTCTTTGTCGATACTCC 59.683 47.826 12.68 0.00 0.00 3.85
2562 6684 4.561735 AGCTAGCTCTTTGTCGATACTC 57.438 45.455 12.68 0.00 0.00 2.59
2563 6685 5.048364 CCATAGCTAGCTCTTTGTCGATACT 60.048 44.000 23.26 0.00 0.00 2.12
2564 6686 5.048643 TCCATAGCTAGCTCTTTGTCGATAC 60.049 44.000 23.26 0.00 0.00 2.24
2565 6687 5.048643 GTCCATAGCTAGCTCTTTGTCGATA 60.049 44.000 23.26 0.00 0.00 2.92
2566 6688 3.891977 TCCATAGCTAGCTCTTTGTCGAT 59.108 43.478 23.26 3.19 0.00 3.59
2567 6689 3.066900 GTCCATAGCTAGCTCTTTGTCGA 59.933 47.826 23.26 8.50 0.00 4.20
2568 6690 3.181486 TGTCCATAGCTAGCTCTTTGTCG 60.181 47.826 23.26 6.37 0.00 4.35
2569 6691 4.367450 CTGTCCATAGCTAGCTCTTTGTC 58.633 47.826 23.26 12.44 0.00 3.18
2570 6692 3.133721 CCTGTCCATAGCTAGCTCTTTGT 59.866 47.826 23.26 0.00 0.00 2.83
2571 6693 3.494048 CCCTGTCCATAGCTAGCTCTTTG 60.494 52.174 23.26 16.78 0.00 2.77
2572 6694 2.703007 CCCTGTCCATAGCTAGCTCTTT 59.297 50.000 23.26 4.57 0.00 2.52
2573 6695 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
2574 6696 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
2575 6697 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
2576 6698 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
2577 6699 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
2578 6700 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
2579 6701 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
2580 6702 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2581 6703 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2582 6704 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2583 6705 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2584 6706 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2586 6708 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2587 6709 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2588 6710 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2589 6711 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2590 6712 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2591 6713 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2592 6714 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2593 6715 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2594 6716 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2595 6717 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2596 6718 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2597 6719 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2598 6720 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2599 6721 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2600 6722 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2601 6723 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2602 6724 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
2603 6725 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
2604 6726 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2605 6727 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2606 6728 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2607 6729 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2608 6730 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2609 6731 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2610 6732 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2611 6733 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2612 6734 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
2613 6735 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2614 6736 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2615 6737 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
2616 6738 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
2617 6739 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2618 6740 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
2619 6741 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
2627 6749 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
2628 6750 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
2629 6751 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
2630 6752 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
2631 6753 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
2632 6754 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
2633 6755 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
2634 6756 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
2635 6757 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
2636 6758 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
2637 6759 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
2638 6760 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
2653 6775 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2654 6776 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2655 6777 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2656 6778 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2657 6779 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2658 6780 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2659 6781 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2660 6782 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2661 6783 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2662 6784 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2663 6785 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2664 6786 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2673 6795 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2674 6796 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2675 6797 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2676 6798 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2677 6799 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2678 6800 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2679 6801 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2680 6802 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2681 6803 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2682 6804 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2683 6805 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2684 6806 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2685 6807 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2686 6808 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2687 6809 9.691362 ATATAACAACAACAACAAAGCCTTTAG 57.309 29.630 0.00 0.00 0.00 1.85
2688 6810 9.469807 CATATAACAACAACAACAAAGCCTTTA 57.530 29.630 0.00 0.00 0.00 1.85
2689 6811 7.984617 ACATATAACAACAACAACAAAGCCTTT 59.015 29.630 0.00 0.00 0.00 3.11
2690 6812 7.496747 ACATATAACAACAACAACAAAGCCTT 58.503 30.769 0.00 0.00 0.00 4.35
2691 6813 7.049799 ACATATAACAACAACAACAAAGCCT 57.950 32.000 0.00 0.00 0.00 4.58
2692 6814 8.980143 ATACATATAACAACAACAACAAAGCC 57.020 30.769 0.00 0.00 0.00 4.35
2714 6840 7.141363 ACAGCTCAAGTCAAATTGTTGAATAC 58.859 34.615 1.63 0.00 45.29 1.89
2735 6861 4.819769 GGATCTATCCATTCAGAGACAGC 58.180 47.826 4.04 0.00 46.38 4.40
2748 6874 9.601217 AATTATTTACTGTATGCGGATCTATCC 57.399 33.333 0.00 0.00 43.65 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.