Multiple sequence alignment - TraesCS7B01G474500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G474500 chr7B 100.000 4042 0 0 1 4042 730813022 730817063 0.000000e+00 7465.0
1 TraesCS7B01G474500 chr7A 93.776 2619 93 36 630 3217 724963307 724965886 0.000000e+00 3869.0
2 TraesCS7B01G474500 chr7A 94.203 621 23 7 41 651 724962538 724963155 0.000000e+00 935.0
3 TraesCS7B01G474500 chr7A 99.323 443 2 1 3209 3651 696890802 696891243 0.000000e+00 800.0
4 TraesCS7B01G474500 chr7A 96.085 281 8 2 3647 3926 724965886 724966164 4.760000e-124 455.0
5 TraesCS7B01G474500 chr7D 97.279 2058 43 6 1163 3217 628214866 628212819 0.000000e+00 3478.0
6 TraesCS7B01G474500 chr7D 95.716 1097 34 6 41 1124 628215972 628214876 0.000000e+00 1753.0
7 TraesCS7B01G474500 chr7D 91.912 408 16 2 3647 4042 628212819 628212417 4.560000e-154 555.0
8 TraesCS7B01G474500 chr7D 95.000 40 2 0 3049 3088 418918987 418919026 3.370000e-06 63.9
9 TraesCS7B01G474500 chr3D 92.490 1012 59 8 2233 3229 29707392 29706383 0.000000e+00 1432.0
10 TraesCS7B01G474500 chr3D 90.062 322 18 7 1465 1774 29708212 29707893 4.860000e-109 405.0
11 TraesCS7B01G474500 chr3D 91.873 283 18 4 3647 3926 29706396 29706116 1.360000e-104 390.0
12 TraesCS7B01G474500 chr3D 94.595 222 12 0 2006 2227 29707725 29707504 1.080000e-90 344.0
13 TraesCS7B01G474500 chr3D 90.411 73 2 3 3954 4021 29706042 29705970 1.550000e-14 91.6
14 TraesCS7B01G474500 chr3A 93.305 926 47 7 2233 3143 40365114 40364189 0.000000e+00 1352.0
15 TraesCS7B01G474500 chr3A 86.515 482 35 13 1414 1878 40365992 40365524 1.680000e-138 503.0
16 TraesCS7B01G474500 chr3A 91.791 268 19 3 1963 2227 40365496 40365229 1.770000e-98 370.0
17 TraesCS7B01G474500 chr3A 90.036 281 22 4 3652 3926 40364135 40363855 3.840000e-95 359.0
18 TraesCS7B01G474500 chr3A 81.250 192 11 11 725 901 40366280 40366099 9.120000e-27 132.0
19 TraesCS7B01G474500 chr3B 91.515 990 51 19 2239 3217 50938683 50937716 0.000000e+00 1332.0
20 TraesCS7B01G474500 chr3B 99.323 443 2 1 3209 3651 233326303 233325862 0.000000e+00 800.0
21 TraesCS7B01G474500 chr3B 99.321 442 3 0 3210 3651 556050967 556051408 0.000000e+00 800.0
22 TraesCS7B01G474500 chr3B 88.308 402 24 4 2614 3014 50937041 50936662 1.020000e-125 460.0
23 TraesCS7B01G474500 chr3B 94.737 266 13 1 1963 2227 50939066 50938801 2.910000e-111 412.0
24 TraesCS7B01G474500 chr3B 90.244 287 21 5 3647 3926 50937716 50937430 6.380000e-98 368.0
25 TraesCS7B01G474500 chr3B 85.390 308 29 11 3724 4021 50933694 50933393 5.080000e-79 305.0
26 TraesCS7B01G474500 chr3B 90.385 208 13 4 3012 3217 50933958 50933756 2.400000e-67 267.0
27 TraesCS7B01G474500 chr3B 95.868 121 5 0 1495 1615 50939458 50939338 3.190000e-46 196.0
28 TraesCS7B01G474500 chr3B 94.118 68 4 0 3954 4021 50937362 50937295 1.990000e-18 104.0
29 TraesCS7B01G474500 chr6B 99.324 444 2 1 3208 3651 339383035 339383477 0.000000e+00 802.0
30 TraesCS7B01G474500 chr4B 99.546 441 1 1 3211 3651 187177281 187176842 0.000000e+00 802.0
31 TraesCS7B01G474500 chr4B 98.451 452 4 3 3201 3651 217278170 217277721 0.000000e+00 793.0
32 TraesCS7B01G474500 chr2A 99.105 447 3 1 3205 3651 713193573 713194018 0.000000e+00 802.0
33 TraesCS7B01G474500 chr2A 98.884 448 2 3 3204 3651 384333886 384334330 0.000000e+00 797.0
34 TraesCS7B01G474500 chr1B 99.323 443 2 1 3209 3651 255507779 255507338 0.000000e+00 800.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G474500 chr7B 730813022 730817063 4041 False 7465.000000 7465 100.000000 1 4042 1 chr7B.!!$F1 4041
1 TraesCS7B01G474500 chr7A 724962538 724966164 3626 False 1753.000000 3869 94.688000 41 3926 3 chr7A.!!$F2 3885
2 TraesCS7B01G474500 chr7D 628212417 628215972 3555 True 1928.666667 3478 94.969000 41 4042 3 chr7D.!!$R1 4001
3 TraesCS7B01G474500 chr3D 29705970 29708212 2242 True 532.520000 1432 91.886200 1465 4021 5 chr3D.!!$R1 2556
4 TraesCS7B01G474500 chr3A 40363855 40366280 2425 True 543.200000 1352 88.579400 725 3926 5 chr3A.!!$R1 3201
5 TraesCS7B01G474500 chr3B 50933393 50939458 6065 True 430.500000 1332 91.320625 1495 4021 8 chr3B.!!$R2 2526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 969 0.253044 TGGTAAGTGAGCAGGATGGC 59.747 55.0 0.00 0.00 35.86 4.40 F
910 1125 0.393267 TACAAAGGCATGTACGGGGC 60.393 55.0 0.00 2.39 34.75 5.80 F
1449 1695 0.754217 CATGGATGGGGAGCACCAAG 60.754 60.0 1.58 0.00 45.13 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2421 2861 0.245266 TGGCTTGCAATCATGTGCTG 59.755 50.000 0.0 4.32 45.17 4.41 R
2813 3257 5.481200 TCTGTACTAGAACATCTACGTGC 57.519 43.478 0.0 0.00 30.84 5.34 R
3431 3880 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.0 0.00 0.00 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.575162 TCTTAGTTTTCTGGGAAAGATTGC 57.425 37.500 0.00 0.00 33.93 3.56
26 27 6.306987 TCTTAGTTTTCTGGGAAAGATTGCT 58.693 36.000 0.00 0.00 33.93 3.91
27 28 7.458397 TCTTAGTTTTCTGGGAAAGATTGCTA 58.542 34.615 0.00 0.00 33.93 3.49
28 29 5.966742 AGTTTTCTGGGAAAGATTGCTAC 57.033 39.130 0.00 0.00 33.93 3.58
29 30 4.455877 AGTTTTCTGGGAAAGATTGCTACG 59.544 41.667 0.00 0.00 33.93 3.51
30 31 2.691409 TCTGGGAAAGATTGCTACGG 57.309 50.000 0.00 0.00 0.00 4.02
31 32 2.184533 TCTGGGAAAGATTGCTACGGA 58.815 47.619 0.00 0.00 0.00 4.69
32 33 2.771943 TCTGGGAAAGATTGCTACGGAT 59.228 45.455 0.00 0.00 0.00 4.18
33 34 3.134458 CTGGGAAAGATTGCTACGGATC 58.866 50.000 0.00 0.00 0.00 3.36
34 35 2.503765 TGGGAAAGATTGCTACGGATCA 59.496 45.455 0.00 0.00 0.00 2.92
35 36 3.134458 GGGAAAGATTGCTACGGATCAG 58.866 50.000 0.00 0.00 0.00 2.90
36 37 2.545946 GGAAAGATTGCTACGGATCAGC 59.454 50.000 0.00 0.00 39.56 4.26
37 38 2.988010 AAGATTGCTACGGATCAGCA 57.012 45.000 2.24 2.24 46.96 4.41
121 132 4.228912 AGAAAAGTATGTTGCTGCACAC 57.771 40.909 0.00 4.94 0.00 3.82
266 278 0.654160 GGTTTCAATACGCTACGGCC 59.346 55.000 0.00 0.00 34.44 6.13
268 280 0.806884 TTTCAATACGCTACGGCCCG 60.807 55.000 0.00 0.00 34.44 6.13
357 374 3.096092 AGGAGAGTGATCCAGTCAAGAC 58.904 50.000 4.81 0.00 42.26 3.01
414 433 8.728337 TCATTCTCCAGAATCTACAGAATTTG 57.272 34.615 11.24 5.78 42.41 2.32
455 476 8.599055 TGCTAATCACTCATTGTATGAATCTC 57.401 34.615 0.00 0.00 39.11 2.75
456 477 7.383300 TGCTAATCACTCATTGTATGAATCTCG 59.617 37.037 0.00 0.00 39.11 4.04
566 588 2.622942 TCCAAGCAAGCACTAAAAGTGG 59.377 45.455 8.99 0.00 46.01 4.00
615 637 0.394899 GTCCCCATTCTGAGCCAAGG 60.395 60.000 0.00 0.00 0.00 3.61
685 881 2.744202 CCCACTATCACACAAGTCAAGC 59.256 50.000 0.00 0.00 0.00 4.01
772 969 0.253044 TGGTAAGTGAGCAGGATGGC 59.747 55.000 0.00 0.00 35.86 4.40
910 1125 0.393267 TACAAAGGCATGTACGGGGC 60.393 55.000 0.00 2.39 34.75 5.80
981 1196 7.698130 CGAAACAAGGGAATTATTTAGAAGCAG 59.302 37.037 0.00 0.00 0.00 4.24
1124 1344 5.475909 TGGTATCACTGATCCTTACGGTATC 59.524 44.000 0.00 0.00 0.00 2.24
1127 1347 2.963101 CACTGATCCTTACGGTATCCCA 59.037 50.000 0.00 0.00 0.00 4.37
1135 1355 4.717778 TCCTTACGGTATCCCAATCTGAAA 59.282 41.667 0.00 0.00 0.00 2.69
1136 1356 5.057149 CCTTACGGTATCCCAATCTGAAAG 58.943 45.833 0.00 0.00 0.00 2.62
1137 1357 5.396436 CCTTACGGTATCCCAATCTGAAAGT 60.396 44.000 0.00 0.00 33.76 2.66
1138 1358 6.183360 CCTTACGGTATCCCAATCTGAAAGTA 60.183 42.308 0.00 0.00 33.76 2.24
1139 1359 5.687166 ACGGTATCCCAATCTGAAAGTAA 57.313 39.130 0.00 0.00 33.76 2.24
1140 1360 5.425630 ACGGTATCCCAATCTGAAAGTAAC 58.574 41.667 0.00 0.00 33.76 2.50
1141 1361 5.046159 ACGGTATCCCAATCTGAAAGTAACA 60.046 40.000 0.00 0.00 33.76 2.41
1146 1366 6.373005 TCCCAATCTGAAAGTAACATCTCA 57.627 37.500 0.00 0.00 33.76 3.27
1148 1368 5.065731 CCCAATCTGAAAGTAACATCTCAGC 59.934 44.000 0.00 0.00 36.15 4.26
1154 1374 6.148315 TCTGAAAGTAACATCTCAGCATTGTG 59.852 38.462 0.00 0.00 36.15 3.33
1404 1650 2.100418 GGGCTCAATGAAGATTCTTGGC 59.900 50.000 3.03 0.65 0.00 4.52
1416 1662 3.136123 CTTGGCGGCAGGGATGTG 61.136 66.667 13.71 0.00 0.00 3.21
1449 1695 0.754217 CATGGATGGGGAGCACCAAG 60.754 60.000 1.58 0.00 45.13 3.61
1948 2218 2.610833 TGAGCACAATCAGCATCGAATC 59.389 45.455 0.00 0.00 0.00 2.52
2237 2657 5.221803 ACTCCATGTCCAATAGCTAGAATGG 60.222 44.000 14.04 14.04 35.66 3.16
2359 2780 7.710044 GCCTTTCAAGTACTTCCCTAGTTATAC 59.290 40.741 4.77 0.00 38.33 1.47
2378 2799 2.597455 ACAGGGCAGTGCATTTAACTT 58.403 42.857 18.61 0.00 0.00 2.66
2421 2861 1.548269 AGCAGCAAGACAGGAGTAGAC 59.452 52.381 0.00 0.00 0.00 2.59
2513 2957 4.691685 TGCAGACAATTTTTCATCATTGCC 59.308 37.500 0.00 0.00 34.26 4.52
3177 3622 9.601217 AATTATTTACTGTATGCGGATCTATCC 57.399 33.333 0.00 0.00 43.65 2.59
3190 3635 4.819769 GGATCTATCCATTCAGAGACAGC 58.180 47.826 4.04 0.00 46.38 4.40
3211 3656 7.141363 ACAGCTCAAGTCAAATTGTTGAATAC 58.859 34.615 1.63 0.00 45.29 1.89
3233 3682 8.980143 ATACATATAACAACAACAACAAAGCC 57.020 30.769 0.00 0.00 0.00 4.35
3234 3683 7.049799 ACATATAACAACAACAACAAAGCCT 57.950 32.000 0.00 0.00 0.00 4.58
3235 3684 7.496747 ACATATAACAACAACAACAAAGCCTT 58.503 30.769 0.00 0.00 0.00 4.35
3236 3685 7.984617 ACATATAACAACAACAACAAAGCCTTT 59.015 29.630 0.00 0.00 0.00 3.11
3237 3686 9.469807 CATATAACAACAACAACAAAGCCTTTA 57.530 29.630 0.00 0.00 0.00 1.85
3238 3687 9.691362 ATATAACAACAACAACAAAGCCTTTAG 57.309 29.630 0.00 0.00 0.00 1.85
3239 3688 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
3240 3689 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
3241 3690 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
3242 3691 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
3243 3692 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
3244 3693 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
3245 3694 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
3246 3695 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
3247 3696 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
3248 3697 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
3249 3698 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
3250 3699 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
3251 3700 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
3252 3701 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
3261 3710 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
3262 3711 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
3263 3712 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
3264 3713 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
3265 3714 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
3266 3715 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
3267 3716 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
3268 3717 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
3269 3718 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
3270 3719 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
3271 3720 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
3272 3721 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
3287 3736 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
3288 3737 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
3289 3738 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
3290 3739 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
3291 3740 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
3292 3741 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
3293 3742 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
3294 3743 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
3295 3744 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
3296 3745 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
3297 3746 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
3298 3747 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
3306 3755 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
3307 3756 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
3308 3757 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
3309 3758 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
3310 3759 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
3311 3760 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
3312 3761 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
3313 3762 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
3314 3763 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
3315 3764 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
3316 3765 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
3317 3766 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
3318 3767 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
3319 3768 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
3320 3769 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
3321 3770 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
3322 3771 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
3323 3772 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
3324 3773 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
3325 3774 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
3326 3775 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
3327 3776 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
3328 3777 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
3329 3778 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
3330 3779 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
3331 3780 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
3332 3781 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
3333 3782 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
3334 3783 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
3335 3784 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
3336 3785 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
3337 3786 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
3338 3787 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
3339 3788 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
3341 3790 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
3342 3791 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
3343 3792 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
3344 3793 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
3345 3794 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
3346 3795 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
3347 3796 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
3348 3797 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
3349 3798 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
3350 3799 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
3351 3800 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
3352 3801 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
3353 3802 2.703007 CCCTGTCCATAGCTAGCTCTTT 59.297 50.000 23.26 4.57 0.00 2.52
3354 3803 3.494048 CCCTGTCCATAGCTAGCTCTTTG 60.494 52.174 23.26 16.78 0.00 2.77
3355 3804 3.133721 CCTGTCCATAGCTAGCTCTTTGT 59.866 47.826 23.26 0.00 0.00 2.83
3356 3805 4.367450 CTGTCCATAGCTAGCTCTTTGTC 58.633 47.826 23.26 12.44 0.00 3.18
3357 3806 3.181486 TGTCCATAGCTAGCTCTTTGTCG 60.181 47.826 23.26 6.37 0.00 4.35
3358 3807 3.066900 GTCCATAGCTAGCTCTTTGTCGA 59.933 47.826 23.26 8.50 0.00 4.20
3359 3808 3.891977 TCCATAGCTAGCTCTTTGTCGAT 59.108 43.478 23.26 3.19 0.00 3.59
3360 3809 5.048643 GTCCATAGCTAGCTCTTTGTCGATA 60.049 44.000 23.26 0.00 0.00 2.92
3361 3810 5.048643 TCCATAGCTAGCTCTTTGTCGATAC 60.049 44.000 23.26 0.00 0.00 2.24
3362 3811 5.048364 CCATAGCTAGCTCTTTGTCGATACT 60.048 44.000 23.26 0.00 0.00 2.12
3363 3812 4.561735 AGCTAGCTCTTTGTCGATACTC 57.438 45.455 12.68 0.00 0.00 2.59
3364 3813 3.316868 AGCTAGCTCTTTGTCGATACTCC 59.683 47.826 12.68 0.00 0.00 3.85
3365 3814 3.066900 GCTAGCTCTTTGTCGATACTCCA 59.933 47.826 7.70 0.00 0.00 3.86
3366 3815 4.440250 GCTAGCTCTTTGTCGATACTCCAA 60.440 45.833 7.70 0.00 0.00 3.53
3367 3816 4.744795 AGCTCTTTGTCGATACTCCAAT 57.255 40.909 0.00 0.00 0.00 3.16
3368 3817 4.688021 AGCTCTTTGTCGATACTCCAATC 58.312 43.478 0.00 0.00 0.00 2.67
3369 3818 3.804873 GCTCTTTGTCGATACTCCAATCC 59.195 47.826 0.00 0.00 0.00 3.01
3370 3819 4.442192 GCTCTTTGTCGATACTCCAATCCT 60.442 45.833 0.00 0.00 0.00 3.24
3371 3820 5.665459 CTCTTTGTCGATACTCCAATCCTT 58.335 41.667 0.00 0.00 0.00 3.36
3372 3821 5.661458 TCTTTGTCGATACTCCAATCCTTC 58.339 41.667 0.00 0.00 0.00 3.46
3373 3822 5.186992 TCTTTGTCGATACTCCAATCCTTCA 59.813 40.000 0.00 0.00 0.00 3.02
3374 3823 4.655762 TGTCGATACTCCAATCCTTCAG 57.344 45.455 0.00 0.00 0.00 3.02
3375 3824 3.384789 TGTCGATACTCCAATCCTTCAGG 59.615 47.826 0.00 0.00 0.00 3.86
3376 3825 3.385111 GTCGATACTCCAATCCTTCAGGT 59.615 47.826 0.00 0.00 36.34 4.00
3377 3826 3.637229 TCGATACTCCAATCCTTCAGGTC 59.363 47.826 0.00 0.00 36.34 3.85
3378 3827 3.639094 CGATACTCCAATCCTTCAGGTCT 59.361 47.826 0.00 0.00 36.34 3.85
3379 3828 4.261825 CGATACTCCAATCCTTCAGGTCTC 60.262 50.000 0.00 0.00 36.34 3.36
3380 3829 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
3381 3830 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
3382 3831 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
3383 3832 3.774216 CTCCAATCCTTCAGGTCTCTCTT 59.226 47.826 0.00 0.00 36.34 2.85
3384 3833 4.947883 TCCAATCCTTCAGGTCTCTCTTA 58.052 43.478 0.00 0.00 36.34 2.10
3385 3834 5.342017 TCCAATCCTTCAGGTCTCTCTTAA 58.658 41.667 0.00 0.00 36.34 1.85
3386 3835 5.187967 TCCAATCCTTCAGGTCTCTCTTAAC 59.812 44.000 0.00 0.00 36.34 2.01
3387 3836 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
3388 3837 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
3389 3838 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
3390 3839 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
3391 3840 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
3392 3841 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
3393 3842 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
3394 3843 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
3395 3844 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
3396 3845 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
3397 3846 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
3398 3847 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
3399 3848 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
3400 3849 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
3401 3850 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
3402 3851 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
3403 3852 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
3404 3853 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
3405 3854 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
3406 3855 1.003118 CGGACTCCTCCCATGTCAAAA 59.997 52.381 0.00 0.00 31.93 2.44
3407 3856 2.356125 CGGACTCCTCCCATGTCAAAAT 60.356 50.000 0.00 0.00 31.93 1.82
3408 3857 3.282885 GGACTCCTCCCATGTCAAAATC 58.717 50.000 0.00 0.00 32.84 2.17
3409 3858 2.939103 GACTCCTCCCATGTCAAAATCG 59.061 50.000 0.00 0.00 0.00 3.34
3410 3859 2.292267 CTCCTCCCATGTCAAAATCGG 58.708 52.381 0.00 0.00 0.00 4.18
3411 3860 1.633432 TCCTCCCATGTCAAAATCGGT 59.367 47.619 0.00 0.00 0.00 4.69
3412 3861 2.017049 CCTCCCATGTCAAAATCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
3413 3862 1.665679 CTCCCATGTCAAAATCGGTCG 59.334 52.381 0.00 0.00 0.00 4.79
3414 3863 1.276705 TCCCATGTCAAAATCGGTCGA 59.723 47.619 0.00 0.00 0.00 4.20
3415 3864 1.396996 CCCATGTCAAAATCGGTCGAC 59.603 52.381 7.13 7.13 0.00 4.20
3416 3865 1.396996 CCATGTCAAAATCGGTCGACC 59.603 52.381 25.28 25.28 0.00 4.79
3417 3866 1.396996 CATGTCAAAATCGGTCGACCC 59.603 52.381 28.52 12.33 0.00 4.46
3418 3867 0.320946 TGTCAAAATCGGTCGACCCC 60.321 55.000 28.52 5.39 0.00 4.95
3428 3877 4.377760 TCGACCCCGCCCTCTCTT 62.378 66.667 0.00 0.00 35.37 2.85
3429 3878 4.148825 CGACCCCGCCCTCTCTTG 62.149 72.222 0.00 0.00 0.00 3.02
3430 3879 2.683933 GACCCCGCCCTCTCTTGA 60.684 66.667 0.00 0.00 0.00 3.02
3431 3880 3.003763 ACCCCGCCCTCTCTTGAC 61.004 66.667 0.00 0.00 0.00 3.18
3432 3881 3.003173 CCCCGCCCTCTCTTGACA 61.003 66.667 0.00 0.00 0.00 3.58
3433 3882 2.370445 CCCCGCCCTCTCTTGACAT 61.370 63.158 0.00 0.00 0.00 3.06
3434 3883 1.604378 CCCGCCCTCTCTTGACATT 59.396 57.895 0.00 0.00 0.00 2.71
3435 3884 0.462759 CCCGCCCTCTCTTGACATTC 60.463 60.000 0.00 0.00 0.00 2.67
3436 3885 0.539051 CCGCCCTCTCTTGACATTCT 59.461 55.000 0.00 0.00 0.00 2.40
3437 3886 1.472376 CCGCCCTCTCTTGACATTCTC 60.472 57.143 0.00 0.00 0.00 2.87
3438 3887 1.472376 CGCCCTCTCTTGACATTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
3439 3888 1.472376 GCCCTCTCTTGACATTCTCCG 60.472 57.143 0.00 0.00 0.00 4.63
3440 3889 1.472376 CCCTCTCTTGACATTCTCCGC 60.472 57.143 0.00 0.00 0.00 5.54
3441 3890 1.205655 CCTCTCTTGACATTCTCCGCA 59.794 52.381 0.00 0.00 0.00 5.69
3442 3891 2.266554 CTCTCTTGACATTCTCCGCAC 58.733 52.381 0.00 0.00 0.00 5.34
3443 3892 0.994995 CTCTTGACATTCTCCGCACG 59.005 55.000 0.00 0.00 0.00 5.34
3444 3893 1.014044 TCTTGACATTCTCCGCACGC 61.014 55.000 0.00 0.00 0.00 5.34
3445 3894 1.005037 TTGACATTCTCCGCACGCT 60.005 52.632 0.00 0.00 0.00 5.07
3446 3895 0.602638 TTGACATTCTCCGCACGCTT 60.603 50.000 0.00 0.00 0.00 4.68
3447 3896 0.602638 TGACATTCTCCGCACGCTTT 60.603 50.000 0.00 0.00 0.00 3.51
3448 3897 1.337354 TGACATTCTCCGCACGCTTTA 60.337 47.619 0.00 0.00 0.00 1.85
3449 3898 1.324736 GACATTCTCCGCACGCTTTAG 59.675 52.381 0.00 0.00 0.00 1.85
3450 3899 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.000 0.00 0.00 37.78 3.09
3451 3900 1.090052 ATTCTCCGCACGCTTTAGCC 61.090 55.000 0.00 0.00 37.91 3.93
3452 3901 3.554692 CTCCGCACGCTTTAGCCG 61.555 66.667 0.00 0.00 37.91 5.52
3453 3902 4.367023 TCCGCACGCTTTAGCCGT 62.367 61.111 0.00 0.00 37.91 5.68
3454 3903 3.849953 CCGCACGCTTTAGCCGTC 61.850 66.667 0.00 0.00 37.91 4.79
3455 3904 3.849953 CGCACGCTTTAGCCGTCC 61.850 66.667 0.00 0.00 37.91 4.79
3456 3905 3.849953 GCACGCTTTAGCCGTCCG 61.850 66.667 0.00 0.00 37.91 4.79
3457 3906 3.849953 CACGCTTTAGCCGTCCGC 61.850 66.667 0.00 0.00 37.91 5.54
3466 3915 3.264897 GCCGTCCGCTATGCACTG 61.265 66.667 0.00 0.00 0.00 3.66
3467 3916 2.586079 CCGTCCGCTATGCACTGG 60.586 66.667 0.00 0.00 0.00 4.00
3468 3917 2.494445 CGTCCGCTATGCACTGGA 59.506 61.111 0.00 0.00 0.00 3.86
3469 3918 1.589993 CGTCCGCTATGCACTGGAG 60.590 63.158 0.00 0.00 0.00 3.86
3470 3919 1.884926 GTCCGCTATGCACTGGAGC 60.885 63.158 0.00 0.00 0.00 4.70
3471 3920 2.060383 TCCGCTATGCACTGGAGCT 61.060 57.895 9.31 0.00 33.91 4.09
3472 3921 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
3473 3922 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
3474 3923 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
3475 3924 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
3476 3925 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
3477 3926 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
3478 3927 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
3479 3928 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
3480 3929 1.078567 CACTGGAGCTTCTGGAGGC 60.079 63.158 3.68 0.00 0.00 4.70
3481 3930 2.297129 ACTGGAGCTTCTGGAGGCC 61.297 63.158 3.68 0.00 33.44 5.19
3482 3931 1.994507 CTGGAGCTTCTGGAGGCCT 60.995 63.158 3.86 3.86 33.44 5.19
3483 3932 2.254737 CTGGAGCTTCTGGAGGCCTG 62.255 65.000 12.00 0.00 33.44 4.85
3484 3933 2.124778 GAGCTTCTGGAGGCCTGC 60.125 66.667 18.95 18.95 33.44 4.85
3485 3934 4.093291 AGCTTCTGGAGGCCTGCG 62.093 66.667 20.39 14.23 33.44 5.18
3487 3936 4.093291 CTTCTGGAGGCCTGCGCT 62.093 66.667 20.39 0.00 34.44 5.92
3488 3937 4.399395 TTCTGGAGGCCTGCGCTG 62.399 66.667 20.39 12.20 34.44 5.18
3490 3939 4.399395 CTGGAGGCCTGCGCTGAA 62.399 66.667 20.39 0.00 34.44 3.02
3491 3940 3.694058 CTGGAGGCCTGCGCTGAAT 62.694 63.158 20.39 0.55 34.44 2.57
3492 3941 2.315781 CTGGAGGCCTGCGCTGAATA 62.316 60.000 20.39 0.00 34.44 1.75
3493 3942 1.072159 GGAGGCCTGCGCTGAATAT 59.928 57.895 12.00 0.00 34.44 1.28
3494 3943 1.233285 GGAGGCCTGCGCTGAATATG 61.233 60.000 12.00 0.00 34.44 1.78
3495 3944 1.849976 GAGGCCTGCGCTGAATATGC 61.850 60.000 12.00 9.73 34.44 3.14
3496 3945 2.641559 GCCTGCGCTGAATATGCC 59.358 61.111 16.65 0.00 0.00 4.40
3497 3946 2.912624 GCCTGCGCTGAATATGCCC 61.913 63.158 16.65 0.00 0.00 5.36
3498 3947 1.526686 CCTGCGCTGAATATGCCCA 60.527 57.895 16.65 0.00 0.00 5.36
3499 3948 1.102809 CCTGCGCTGAATATGCCCAA 61.103 55.000 16.65 0.00 0.00 4.12
3500 3949 0.740149 CTGCGCTGAATATGCCCAAA 59.260 50.000 9.73 0.00 0.00 3.28
3501 3950 0.455410 TGCGCTGAATATGCCCAAAC 59.545 50.000 9.73 0.00 0.00 2.93
3502 3951 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
3503 3952 1.102154 CGCTGAATATGCCCAAACCA 58.898 50.000 0.00 0.00 0.00 3.67
3504 3953 1.682854 CGCTGAATATGCCCAAACCAT 59.317 47.619 0.00 0.00 0.00 3.55
3505 3954 2.287788 CGCTGAATATGCCCAAACCATC 60.288 50.000 0.00 0.00 0.00 3.51
3506 3955 2.961062 GCTGAATATGCCCAAACCATCT 59.039 45.455 0.00 0.00 0.00 2.90
3507 3956 3.005155 GCTGAATATGCCCAAACCATCTC 59.995 47.826 0.00 0.00 0.00 2.75
3508 3957 4.209538 CTGAATATGCCCAAACCATCTCA 58.790 43.478 0.00 0.00 0.00 3.27
3509 3958 4.608269 TGAATATGCCCAAACCATCTCAA 58.392 39.130 0.00 0.00 0.00 3.02
3510 3959 5.022122 TGAATATGCCCAAACCATCTCAAA 58.978 37.500 0.00 0.00 0.00 2.69
3511 3960 5.105392 TGAATATGCCCAAACCATCTCAAAC 60.105 40.000 0.00 0.00 0.00 2.93
3512 3961 0.958091 TGCCCAAACCATCTCAAACG 59.042 50.000 0.00 0.00 0.00 3.60
3513 3962 1.243902 GCCCAAACCATCTCAAACGA 58.756 50.000 0.00 0.00 0.00 3.85
3514 3963 1.818674 GCCCAAACCATCTCAAACGAT 59.181 47.619 0.00 0.00 0.00 3.73
3515 3964 2.415893 GCCCAAACCATCTCAAACGATG 60.416 50.000 0.00 0.00 40.32 3.84
3516 3965 2.819608 CCCAAACCATCTCAAACGATGT 59.180 45.455 0.00 0.00 39.26 3.06
3517 3966 3.255642 CCCAAACCATCTCAAACGATGTT 59.744 43.478 0.00 0.00 39.26 2.71
3518 3967 4.229096 CCAAACCATCTCAAACGATGTTG 58.771 43.478 0.00 0.00 39.26 3.33
3519 3968 4.229096 CAAACCATCTCAAACGATGTTGG 58.771 43.478 0.00 0.70 39.26 3.77
3520 3969 3.417069 ACCATCTCAAACGATGTTGGA 57.583 42.857 0.00 0.00 39.26 3.53
3521 3970 3.074412 ACCATCTCAAACGATGTTGGAC 58.926 45.455 0.00 0.00 39.26 4.02
3522 3971 3.073678 CCATCTCAAACGATGTTGGACA 58.926 45.455 0.00 0.00 39.26 4.02
3523 3972 3.501828 CCATCTCAAACGATGTTGGACAA 59.498 43.478 0.00 0.00 39.26 3.18
3524 3973 4.378770 CCATCTCAAACGATGTTGGACAAG 60.379 45.833 0.00 0.00 39.26 3.16
3525 3974 2.548057 TCTCAAACGATGTTGGACAAGC 59.452 45.455 0.00 0.00 0.00 4.01
3526 3975 2.549754 CTCAAACGATGTTGGACAAGCT 59.450 45.455 0.00 0.00 0.00 3.74
3527 3976 2.948979 TCAAACGATGTTGGACAAGCTT 59.051 40.909 0.00 0.00 0.00 3.74
3528 3977 3.003275 TCAAACGATGTTGGACAAGCTTC 59.997 43.478 0.00 0.00 0.00 3.86
3529 3978 2.550830 ACGATGTTGGACAAGCTTCT 57.449 45.000 0.00 0.00 0.00 2.85
3530 3979 2.417719 ACGATGTTGGACAAGCTTCTC 58.582 47.619 0.00 0.00 0.00 2.87
3531 3980 1.734465 CGATGTTGGACAAGCTTCTCC 59.266 52.381 13.47 13.47 0.00 3.71
3532 3981 2.613977 CGATGTTGGACAAGCTTCTCCT 60.614 50.000 19.96 1.39 0.00 3.69
3533 3982 2.550830 TGTTGGACAAGCTTCTCCTC 57.449 50.000 19.96 13.65 0.00 3.71
3534 3983 1.768275 TGTTGGACAAGCTTCTCCTCA 59.232 47.619 19.96 15.67 0.00 3.86
3535 3984 2.172505 TGTTGGACAAGCTTCTCCTCAA 59.827 45.455 19.96 5.96 0.00 3.02
3536 3985 3.181440 TGTTGGACAAGCTTCTCCTCAAT 60.181 43.478 19.96 0.00 0.00 2.57
3537 3986 3.795688 TGGACAAGCTTCTCCTCAATT 57.204 42.857 19.96 0.00 0.00 2.32
3538 3987 3.415212 TGGACAAGCTTCTCCTCAATTG 58.585 45.455 19.96 0.00 0.00 2.32
3539 3988 2.751806 GGACAAGCTTCTCCTCAATTGG 59.248 50.000 13.12 0.00 0.00 3.16
3540 3989 3.416156 GACAAGCTTCTCCTCAATTGGT 58.584 45.455 5.42 0.00 0.00 3.67
3541 3990 3.152341 ACAAGCTTCTCCTCAATTGGTG 58.848 45.455 5.42 0.00 0.00 4.17
3542 3991 1.831580 AGCTTCTCCTCAATTGGTGC 58.168 50.000 5.42 0.62 0.00 5.01
3543 3992 1.353694 AGCTTCTCCTCAATTGGTGCT 59.646 47.619 5.42 2.81 0.00 4.40
3544 3993 2.573462 AGCTTCTCCTCAATTGGTGCTA 59.427 45.455 5.42 0.00 0.00 3.49
3545 3994 2.680339 GCTTCTCCTCAATTGGTGCTAC 59.320 50.000 5.42 0.00 0.00 3.58
3546 3995 3.274288 CTTCTCCTCAATTGGTGCTACC 58.726 50.000 5.42 0.00 39.22 3.18
3547 3996 1.559682 TCTCCTCAATTGGTGCTACCC 59.440 52.381 5.42 0.00 37.50 3.69
3548 3997 0.623723 TCCTCAATTGGTGCTACCCC 59.376 55.000 5.42 0.00 37.50 4.95
3549 3998 0.331278 CCTCAATTGGTGCTACCCCA 59.669 55.000 5.42 0.00 37.50 4.96
3550 3999 1.272425 CCTCAATTGGTGCTACCCCAA 60.272 52.381 5.42 0.00 45.55 4.12
3551 4000 1.818674 CTCAATTGGTGCTACCCCAAC 59.181 52.381 5.42 0.00 44.36 3.77
3552 4001 1.427368 TCAATTGGTGCTACCCCAACT 59.573 47.619 5.42 0.00 44.36 3.16
3553 4002 2.158385 TCAATTGGTGCTACCCCAACTT 60.158 45.455 5.42 0.00 44.36 2.66
3554 4003 2.632512 CAATTGGTGCTACCCCAACTTT 59.367 45.455 0.00 0.00 44.36 2.66
3555 4004 3.818295 ATTGGTGCTACCCCAACTTTA 57.182 42.857 0.00 0.00 44.36 1.85
3556 4005 3.818295 TTGGTGCTACCCCAACTTTAT 57.182 42.857 3.33 0.00 37.50 1.40
3557 4006 3.359695 TGGTGCTACCCCAACTTTATC 57.640 47.619 3.33 0.00 37.50 1.75
3558 4007 2.916934 TGGTGCTACCCCAACTTTATCT 59.083 45.455 3.33 0.00 37.50 1.98
3559 4008 3.054655 TGGTGCTACCCCAACTTTATCTC 60.055 47.826 3.33 0.00 37.50 2.75
3560 4009 3.195661 GTGCTACCCCAACTTTATCTCG 58.804 50.000 0.00 0.00 0.00 4.04
3561 4010 2.835764 TGCTACCCCAACTTTATCTCGT 59.164 45.455 0.00 0.00 0.00 4.18
3562 4011 4.025360 TGCTACCCCAACTTTATCTCGTA 58.975 43.478 0.00 0.00 0.00 3.43
3563 4012 4.652421 TGCTACCCCAACTTTATCTCGTAT 59.348 41.667 0.00 0.00 0.00 3.06
3564 4013 5.834742 TGCTACCCCAACTTTATCTCGTATA 59.165 40.000 0.00 0.00 0.00 1.47
3565 4014 6.495872 TGCTACCCCAACTTTATCTCGTATAT 59.504 38.462 0.00 0.00 0.00 0.86
3566 4015 7.034397 GCTACCCCAACTTTATCTCGTATATC 58.966 42.308 0.00 0.00 0.00 1.63
3567 4016 6.989155 ACCCCAACTTTATCTCGTATATCA 57.011 37.500 0.00 0.00 0.00 2.15
3568 4017 7.554959 ACCCCAACTTTATCTCGTATATCAT 57.445 36.000 0.00 0.00 0.00 2.45
3569 4018 7.612677 ACCCCAACTTTATCTCGTATATCATC 58.387 38.462 0.00 0.00 0.00 2.92
3570 4019 7.234782 ACCCCAACTTTATCTCGTATATCATCA 59.765 37.037 0.00 0.00 0.00 3.07
3571 4020 8.260818 CCCCAACTTTATCTCGTATATCATCAT 58.739 37.037 0.00 0.00 0.00 2.45
3572 4021 9.658799 CCCAACTTTATCTCGTATATCATCATT 57.341 33.333 0.00 0.00 0.00 2.57
3575 4024 9.574458 AACTTTATCTCGTATATCATCATTCCG 57.426 33.333 0.00 0.00 0.00 4.30
3576 4025 8.191446 ACTTTATCTCGTATATCATCATTCCGG 58.809 37.037 0.00 0.00 0.00 5.14
3577 4026 7.875327 TTATCTCGTATATCATCATTCCGGA 57.125 36.000 0.00 0.00 0.00 5.14
3578 4027 5.562506 TCTCGTATATCATCATTCCGGAC 57.437 43.478 1.83 0.00 0.00 4.79
3579 4028 5.254115 TCTCGTATATCATCATTCCGGACT 58.746 41.667 1.83 0.00 0.00 3.85
3580 4029 5.354513 TCTCGTATATCATCATTCCGGACTC 59.645 44.000 1.83 0.00 0.00 3.36
3581 4030 4.094442 TCGTATATCATCATTCCGGACTCG 59.906 45.833 1.83 0.00 0.00 4.18
3582 4031 4.094442 CGTATATCATCATTCCGGACTCGA 59.906 45.833 1.83 0.34 39.00 4.04
3583 4032 5.220873 CGTATATCATCATTCCGGACTCGAT 60.221 44.000 1.83 3.28 39.00 3.59
3584 4033 3.584406 ATCATCATTCCGGACTCGATC 57.416 47.619 1.83 0.00 39.00 3.69
3585 4034 1.613925 TCATCATTCCGGACTCGATCC 59.386 52.381 1.83 4.37 45.20 3.36
3586 4035 1.615883 CATCATTCCGGACTCGATCCT 59.384 52.381 1.83 0.00 46.69 3.24
3587 4036 1.776662 TCATTCCGGACTCGATCCTT 58.223 50.000 1.83 0.00 46.69 3.36
3588 4037 1.681793 TCATTCCGGACTCGATCCTTC 59.318 52.381 1.83 0.00 46.69 3.46
3589 4038 1.041437 ATTCCGGACTCGATCCTTCC 58.959 55.000 1.83 3.28 46.69 3.46
3590 4039 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.000 1.83 0.00 46.69 3.36
3591 4040 0.465824 TCCGGACTCGATCCTTCCTC 60.466 60.000 0.00 0.00 46.69 3.71
3592 4041 1.649815 CGGACTCGATCCTTCCTCG 59.350 63.158 10.77 0.00 46.69 4.63
3593 4042 1.096386 CGGACTCGATCCTTCCTCGT 61.096 60.000 10.77 0.00 46.69 4.18
3594 4043 0.382515 GGACTCGATCCTTCCTCGTG 59.617 60.000 6.63 0.00 45.22 4.35
3595 4044 1.096416 GACTCGATCCTTCCTCGTGT 58.904 55.000 0.70 0.70 43.19 4.49
3596 4045 0.811915 ACTCGATCCTTCCTCGTGTG 59.188 55.000 0.34 0.00 40.21 3.82
3597 4046 0.101399 CTCGATCCTTCCTCGTGTGG 59.899 60.000 0.00 0.00 37.40 4.17
3598 4047 1.519455 CGATCCTTCCTCGTGTGGC 60.519 63.158 0.00 0.00 0.00 5.01
3599 4048 1.153349 GATCCTTCCTCGTGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
3600 4049 1.899437 GATCCTTCCTCGTGTGGCCA 61.899 60.000 0.00 0.00 0.00 5.36
3601 4050 2.185310 ATCCTTCCTCGTGTGGCCAC 62.185 60.000 29.67 29.67 38.27 5.01
3602 4051 2.425592 CTTCCTCGTGTGGCCACA 59.574 61.111 34.74 34.74 41.93 4.17
3612 4061 2.785868 GTGGCCACACATCCATCTC 58.214 57.895 31.23 0.00 46.90 2.75
3613 4062 0.035152 GTGGCCACACATCCATCTCA 60.035 55.000 31.23 0.00 46.90 3.27
3614 4063 0.697658 TGGCCACACATCCATCTCAA 59.302 50.000 0.00 0.00 0.00 3.02
3615 4064 1.098050 GGCCACACATCCATCTCAAC 58.902 55.000 0.00 0.00 0.00 3.18
3616 4065 1.614051 GGCCACACATCCATCTCAACA 60.614 52.381 0.00 0.00 0.00 3.33
3617 4066 2.372264 GCCACACATCCATCTCAACAT 58.628 47.619 0.00 0.00 0.00 2.71
3618 4067 3.544684 GCCACACATCCATCTCAACATA 58.455 45.455 0.00 0.00 0.00 2.29
3619 4068 3.313526 GCCACACATCCATCTCAACATAC 59.686 47.826 0.00 0.00 0.00 2.39
3620 4069 3.557185 CCACACATCCATCTCAACATACG 59.443 47.826 0.00 0.00 0.00 3.06
3621 4070 3.001634 CACACATCCATCTCAACATACGC 59.998 47.826 0.00 0.00 0.00 4.42
3622 4071 3.197265 CACATCCATCTCAACATACGCA 58.803 45.455 0.00 0.00 0.00 5.24
3623 4072 3.811497 CACATCCATCTCAACATACGCAT 59.189 43.478 0.00 0.00 0.00 4.73
3624 4073 4.060900 ACATCCATCTCAACATACGCATC 58.939 43.478 0.00 0.00 0.00 3.91
3625 4074 4.202295 ACATCCATCTCAACATACGCATCT 60.202 41.667 0.00 0.00 0.00 2.90
3626 4075 3.982475 TCCATCTCAACATACGCATCTC 58.018 45.455 0.00 0.00 0.00 2.75
3627 4076 3.062763 CCATCTCAACATACGCATCTCC 58.937 50.000 0.00 0.00 0.00 3.71
3628 4077 2.492019 TCTCAACATACGCATCTCCG 57.508 50.000 0.00 0.00 0.00 4.63
3629 4078 0.855349 CTCAACATACGCATCTCCGC 59.145 55.000 0.00 0.00 0.00 5.54
3630 4079 0.529773 TCAACATACGCATCTCCGCC 60.530 55.000 0.00 0.00 0.00 6.13
3631 4080 0.809636 CAACATACGCATCTCCGCCA 60.810 55.000 0.00 0.00 0.00 5.69
3632 4081 0.810031 AACATACGCATCTCCGCCAC 60.810 55.000 0.00 0.00 0.00 5.01
3633 4082 1.227234 CATACGCATCTCCGCCACA 60.227 57.895 0.00 0.00 0.00 4.17
3634 4083 1.227263 ATACGCATCTCCGCCACAC 60.227 57.895 0.00 0.00 0.00 3.82
3635 4084 2.644555 ATACGCATCTCCGCCACACC 62.645 60.000 0.00 0.00 0.00 4.16
3636 4085 4.457496 CGCATCTCCGCCACACCT 62.457 66.667 0.00 0.00 0.00 4.00
3637 4086 2.900273 GCATCTCCGCCACACCTA 59.100 61.111 0.00 0.00 0.00 3.08
3638 4087 1.220749 GCATCTCCGCCACACCTAA 59.779 57.895 0.00 0.00 0.00 2.69
3639 4088 1.090052 GCATCTCCGCCACACCTAAC 61.090 60.000 0.00 0.00 0.00 2.34
3640 4089 0.537188 CATCTCCGCCACACCTAACT 59.463 55.000 0.00 0.00 0.00 2.24
3641 4090 0.537188 ATCTCCGCCACACCTAACTG 59.463 55.000 0.00 0.00 0.00 3.16
3642 4091 0.830444 TCTCCGCCACACCTAACTGT 60.830 55.000 0.00 0.00 0.00 3.55
3643 4092 0.034896 CTCCGCCACACCTAACTGTT 59.965 55.000 0.00 0.00 0.00 3.16
3644 4093 0.250124 TCCGCCACACCTAACTGTTG 60.250 55.000 2.69 0.00 0.00 3.33
3645 4094 0.250124 CCGCCACACCTAACTGTTGA 60.250 55.000 2.69 0.00 0.00 3.18
3646 4095 1.588674 CGCCACACCTAACTGTTGAA 58.411 50.000 2.69 0.00 0.00 2.69
3650 4099 3.304659 GCCACACCTAACTGTTGAACATG 60.305 47.826 0.00 0.00 0.00 3.21
3722 4176 6.812656 CCTCTGTCTATGATCATACATGCTTC 59.187 42.308 11.49 0.00 0.00 3.86
3773 4227 5.621197 ACAGTAGATATCGACTCTGATGC 57.379 43.478 14.81 0.00 29.21 3.91
3952 4450 2.107204 ACAGAAAATGCCAGTCCAGAGT 59.893 45.455 0.00 0.00 0.00 3.24
3996 8425 8.962884 TGTATGGATATATGTATGCACCATTC 57.037 34.615 5.82 4.68 40.76 2.67
3997 8426 8.547173 TGTATGGATATATGTATGCACCATTCA 58.453 33.333 5.82 6.83 40.76 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.452813 AGCAATCTTTCCCAGAAAACTAAGATT 59.547 33.333 0.00 0.00 40.84 2.40
1 2 6.950619 AGCAATCTTTCCCAGAAAACTAAGAT 59.049 34.615 0.00 0.00 34.16 2.40
2 3 6.306987 AGCAATCTTTCCCAGAAAACTAAGA 58.693 36.000 0.00 0.00 34.16 2.10
3 4 6.581171 AGCAATCTTTCCCAGAAAACTAAG 57.419 37.500 0.00 0.00 34.16 2.18
4 5 6.148811 CGTAGCAATCTTTCCCAGAAAACTAA 59.851 38.462 0.00 0.00 34.16 2.24
5 6 5.642063 CGTAGCAATCTTTCCCAGAAAACTA 59.358 40.000 0.00 0.00 34.16 2.24
6 7 4.455877 CGTAGCAATCTTTCCCAGAAAACT 59.544 41.667 0.00 0.00 34.16 2.66
7 8 4.379499 CCGTAGCAATCTTTCCCAGAAAAC 60.379 45.833 0.00 0.00 34.16 2.43
8 9 3.756434 CCGTAGCAATCTTTCCCAGAAAA 59.244 43.478 0.00 0.00 34.16 2.29
9 10 3.008594 TCCGTAGCAATCTTTCCCAGAAA 59.991 43.478 0.00 0.00 34.16 2.52
10 11 2.569853 TCCGTAGCAATCTTTCCCAGAA 59.430 45.455 0.00 0.00 34.16 3.02
11 12 2.184533 TCCGTAGCAATCTTTCCCAGA 58.815 47.619 0.00 0.00 35.33 3.86
12 13 2.691409 TCCGTAGCAATCTTTCCCAG 57.309 50.000 0.00 0.00 0.00 4.45
13 14 2.503765 TGATCCGTAGCAATCTTTCCCA 59.496 45.455 0.00 0.00 0.00 4.37
14 15 3.134458 CTGATCCGTAGCAATCTTTCCC 58.866 50.000 0.00 0.00 0.00 3.97
15 16 2.545946 GCTGATCCGTAGCAATCTTTCC 59.454 50.000 0.00 0.00 40.81 3.13
16 17 3.868888 GCTGATCCGTAGCAATCTTTC 57.131 47.619 0.00 0.00 40.81 2.62
82 93 1.347707 TCTTCTTTGCCTCGGTCATGT 59.652 47.619 0.00 0.00 0.00 3.21
90 101 5.631096 GCAACATACTTTTCTTCTTTGCCTC 59.369 40.000 0.00 0.00 33.55 4.70
121 132 4.025813 CCAGGCAAGTCAATTTTGTTTTCG 60.026 41.667 0.00 0.00 0.00 3.46
235 246 2.460757 TTGAAACCGCCTACCTGTAC 57.539 50.000 0.00 0.00 0.00 2.90
260 272 1.812686 GCATATGACTCCGGGCCGTA 61.813 60.000 26.32 8.48 0.00 4.02
266 278 2.620251 TTCCAAGCATATGACTCCGG 57.380 50.000 6.97 0.00 0.00 5.14
268 280 3.879892 GGTCTTTCCAAGCATATGACTCC 59.120 47.826 6.97 0.00 35.97 3.85
455 476 2.287427 ACGTGAATCGCTATTAGGGTCG 60.287 50.000 7.54 8.30 44.19 4.79
456 477 3.050619 CACGTGAATCGCTATTAGGGTC 58.949 50.000 10.90 0.62 44.19 4.46
569 591 6.866770 GCATCTACCATGATTAACGCTAACTA 59.133 38.462 0.00 0.00 0.00 2.24
574 596 4.060900 CAGCATCTACCATGATTAACGCT 58.939 43.478 0.00 0.00 0.00 5.07
584 606 3.340064 TGGGGACAGCATCTACCAT 57.660 52.632 0.00 0.00 31.89 3.55
615 637 2.364186 CCCAGTTTGGCCCATCCC 60.364 66.667 0.00 0.00 35.79 3.85
685 881 4.704057 ACTAACTTCTTCCCTACAGGTACG 59.296 45.833 0.00 0.00 36.75 3.67
772 969 6.806249 GTCTGTTATTCTTCTGTCAGAGAGTG 59.194 42.308 2.12 0.00 33.57 3.51
910 1125 4.986034 TGTGTGTGTTTACCTGATACTTCG 59.014 41.667 0.00 0.00 0.00 3.79
981 1196 0.110486 TGGCTTCAGGTGTTCCTTCC 59.890 55.000 0.00 0.00 43.07 3.46
1124 1344 5.065731 GCTGAGATGTTACTTTCAGATTGGG 59.934 44.000 12.73 0.00 39.46 4.12
1127 1347 7.392673 ACAATGCTGAGATGTTACTTTCAGATT 59.607 33.333 12.73 8.24 39.46 2.40
1135 1355 3.937706 GCTCACAATGCTGAGATGTTACT 59.062 43.478 14.07 0.00 40.28 2.24
1136 1356 3.937706 AGCTCACAATGCTGAGATGTTAC 59.062 43.478 14.07 0.09 40.28 2.50
1137 1357 4.212143 AGCTCACAATGCTGAGATGTTA 57.788 40.909 14.07 0.00 40.28 2.41
1138 1358 3.069079 AGCTCACAATGCTGAGATGTT 57.931 42.857 14.07 0.00 40.28 2.71
1139 1359 2.783609 AGCTCACAATGCTGAGATGT 57.216 45.000 14.07 0.00 40.28 3.06
1140 1360 4.166523 CAAAAGCTCACAATGCTGAGATG 58.833 43.478 14.07 5.90 40.28 2.90
1141 1361 3.825014 ACAAAAGCTCACAATGCTGAGAT 59.175 39.130 14.07 7.21 40.28 2.75
1146 1366 3.872771 CCAAAACAAAAGCTCACAATGCT 59.127 39.130 0.00 0.00 43.32 3.79
1148 1368 5.111293 ACTCCAAAACAAAAGCTCACAATG 58.889 37.500 0.00 0.00 0.00 2.82
1154 1374 3.309682 GCCAAACTCCAAAACAAAAGCTC 59.690 43.478 0.00 0.00 0.00 4.09
1404 1650 3.136123 CCAAGCACATCCCTGCCG 61.136 66.667 0.00 0.00 37.96 5.69
1416 1662 0.038166 TCCATGTTCCTCCACCAAGC 59.962 55.000 0.00 0.00 0.00 4.01
1948 2218 4.707030 TGCTTATGTTTGGAGCAAGATG 57.293 40.909 0.00 0.00 42.89 2.90
2237 2657 1.620822 ACAAAGGACACCTCATTGGC 58.379 50.000 0.00 0.00 40.22 4.52
2295 2715 5.771666 TCTCACATCTTTTCCAGCTCAAAAT 59.228 36.000 1.42 0.00 0.00 1.82
2359 2780 4.782019 TTAAGTTAAATGCACTGCCCTG 57.218 40.909 0.00 0.00 0.00 4.45
2378 2799 7.281999 TGCTTGTACATGCAGTGCTATTAATTA 59.718 33.333 27.24 4.77 36.70 1.40
2421 2861 0.245266 TGGCTTGCAATCATGTGCTG 59.755 50.000 0.00 4.32 45.17 4.41
2813 3257 5.481200 TCTGTACTAGAACATCTACGTGC 57.519 43.478 0.00 0.00 30.84 5.34
3177 3622 3.922910 TGACTTGAGCTGTCTCTGAATG 58.077 45.455 0.00 0.00 40.03 2.67
3211 3656 7.945033 AAGGCTTTGTTGTTGTTGTTATATG 57.055 32.000 0.00 0.00 0.00 1.78
3217 3666 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
3218 3667 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
3219 3668 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
3220 3669 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
3221 3670 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
3222 3671 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
3223 3672 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
3224 3673 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
3225 3674 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
3226 3675 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
3227 3676 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
3228 3677 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
3229 3678 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
3230 3679 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
3231 3680 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
3242 3691 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
3243 3692 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
3244 3693 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
3245 3694 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
3246 3695 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
3247 3696 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
3248 3697 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
3249 3698 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
3250 3699 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
3251 3700 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
3252 3701 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
3253 3702 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
3254 3703 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
3255 3704 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
3256 3705 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
3257 3706 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
3258 3707 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
3259 3708 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
3260 3709 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
3261 3710 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
3262 3711 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
3263 3712 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
3264 3713 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
3265 3714 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
3266 3715 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
3267 3716 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
3268 3717 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
3269 3718 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
3270 3719 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
3271 3720 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
3272 3721 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
3273 3722 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
3274 3723 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
3275 3724 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
3276 3725 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
3277 3726 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
3278 3727 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
3279 3728 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
3280 3729 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
3281 3730 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
3290 3739 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
3291 3740 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
3292 3741 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
3293 3742 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
3294 3743 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
3295 3744 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
3296 3745 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
3297 3746 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
3298 3747 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
3299 3748 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
3300 3749 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
3301 3750 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
3302 3751 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
3303 3752 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
3304 3753 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
3305 3754 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
3306 3755 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
3307 3756 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
3308 3757 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
3309 3758 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
3310 3759 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
3311 3760 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
3312 3761 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
3313 3762 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
3314 3763 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
3315 3764 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
3316 3765 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
3317 3766 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
3318 3767 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
3319 3768 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
3320 3769 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
3321 3770 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
3322 3771 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
3324 3773 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
3325 3774 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
3326 3775 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
3327 3776 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
3328 3777 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
3329 3778 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
3330 3779 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
3331 3780 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
3332 3781 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
3333 3782 3.133721 ACAAAGAGCTAGCTATGGACAGG 59.866 47.826 19.38 4.81 0.00 4.00
3334 3783 4.367450 GACAAAGAGCTAGCTATGGACAG 58.633 47.826 19.38 6.25 0.00 3.51
3335 3784 3.181486 CGACAAAGAGCTAGCTATGGACA 60.181 47.826 19.38 0.00 0.00 4.02
3336 3785 3.066900 TCGACAAAGAGCTAGCTATGGAC 59.933 47.826 19.38 10.10 0.00 4.02
3337 3786 3.288092 TCGACAAAGAGCTAGCTATGGA 58.712 45.455 19.38 8.12 0.00 3.41
3338 3787 3.717400 TCGACAAAGAGCTAGCTATGG 57.283 47.619 19.38 13.23 0.00 2.74
3339 3788 6.007936 AGTATCGACAAAGAGCTAGCTATG 57.992 41.667 19.38 18.66 0.00 2.23
3340 3789 5.182380 GGAGTATCGACAAAGAGCTAGCTAT 59.818 44.000 19.38 12.73 34.37 2.97
3341 3790 4.515944 GGAGTATCGACAAAGAGCTAGCTA 59.484 45.833 19.38 0.00 34.37 3.32
3342 3791 3.316868 GGAGTATCGACAAAGAGCTAGCT 59.683 47.826 19.45 19.45 34.37 3.32
3343 3792 3.066900 TGGAGTATCGACAAAGAGCTAGC 59.933 47.826 6.62 6.62 34.37 3.42
3344 3793 4.902443 TGGAGTATCGACAAAGAGCTAG 57.098 45.455 0.00 0.00 34.37 3.42
3345 3794 5.221263 GGATTGGAGTATCGACAAAGAGCTA 60.221 44.000 0.00 0.00 34.37 3.32
3346 3795 4.442192 GGATTGGAGTATCGACAAAGAGCT 60.442 45.833 0.00 0.00 34.37 4.09
3347 3796 3.804873 GGATTGGAGTATCGACAAAGAGC 59.195 47.826 0.00 0.00 34.37 4.09
3348 3797 5.269505 AGGATTGGAGTATCGACAAAGAG 57.730 43.478 0.00 0.00 34.37 2.85
3349 3798 5.186992 TGAAGGATTGGAGTATCGACAAAGA 59.813 40.000 0.00 0.00 34.37 2.52
3350 3799 5.419542 TGAAGGATTGGAGTATCGACAAAG 58.580 41.667 0.00 0.00 34.37 2.77
3351 3800 5.414789 TGAAGGATTGGAGTATCGACAAA 57.585 39.130 0.00 0.00 34.37 2.83
3352 3801 4.141937 CCTGAAGGATTGGAGTATCGACAA 60.142 45.833 0.00 0.00 37.39 3.18
3353 3802 3.384789 CCTGAAGGATTGGAGTATCGACA 59.615 47.826 0.00 0.00 37.39 4.35
3354 3803 3.385111 ACCTGAAGGATTGGAGTATCGAC 59.615 47.826 2.62 0.00 38.94 4.20
3355 3804 3.637229 GACCTGAAGGATTGGAGTATCGA 59.363 47.826 2.62 0.00 38.94 3.59
3356 3805 3.639094 AGACCTGAAGGATTGGAGTATCG 59.361 47.826 2.62 0.00 38.94 2.92
3357 3806 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
3358 3807 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
3359 3808 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
3360 3809 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
3361 3810 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
3362 3811 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
3363 3812 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
3364 3813 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
3365 3814 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
3366 3815 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
3367 3816 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
3368 3817 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
3369 3818 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
3370 3819 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
3371 3820 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
3372 3821 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
3373 3822 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
3374 3823 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
3375 3824 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
3376 3825 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
3377 3826 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
3378 3827 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
3379 3828 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
3380 3829 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
3381 3830 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
3382 3831 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
3383 3832 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
3384 3833 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
3385 3834 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
3386 3835 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
3387 3836 2.879103 TTTTGACATGGGAGGAGTCC 57.121 50.000 0.00 0.00 43.05 3.85
3388 3837 2.939103 CGATTTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
3389 3838 2.356125 CCGATTTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
3390 3839 2.292267 CCGATTTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
3391 3840 1.633432 ACCGATTTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
3392 3841 2.017049 GACCGATTTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
3393 3842 1.665679 CGACCGATTTTGACATGGGAG 59.334 52.381 0.00 0.00 0.00 4.30
3394 3843 1.276705 TCGACCGATTTTGACATGGGA 59.723 47.619 0.00 0.00 0.00 4.37
3395 3844 1.396996 GTCGACCGATTTTGACATGGG 59.603 52.381 3.51 0.00 31.01 4.00
3396 3845 1.396996 GGTCGACCGATTTTGACATGG 59.603 52.381 20.85 0.00 32.13 3.66
3397 3846 1.396996 GGGTCGACCGATTTTGACATG 59.603 52.381 27.68 0.00 36.71 3.21
3398 3847 1.677820 GGGGTCGACCGATTTTGACAT 60.678 52.381 27.68 0.00 41.60 3.06
3399 3848 0.320946 GGGGTCGACCGATTTTGACA 60.321 55.000 27.68 0.00 41.60 3.58
3400 3849 2.463592 GGGGTCGACCGATTTTGAC 58.536 57.895 27.68 11.35 41.60 3.18
3411 3860 4.377760 AAGAGAGGGCGGGGTCGA 62.378 66.667 0.00 0.00 39.00 4.20
3412 3861 4.148825 CAAGAGAGGGCGGGGTCG 62.149 72.222 0.00 0.00 39.81 4.79
3413 3862 2.683933 TCAAGAGAGGGCGGGGTC 60.684 66.667 0.00 0.00 0.00 4.46
3414 3863 3.003763 GTCAAGAGAGGGCGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
3415 3864 1.915078 AATGTCAAGAGAGGGCGGGG 61.915 60.000 0.00 0.00 0.00 5.73
3416 3865 0.462759 GAATGTCAAGAGAGGGCGGG 60.463 60.000 0.00 0.00 0.00 6.13
3417 3866 0.539051 AGAATGTCAAGAGAGGGCGG 59.461 55.000 0.00 0.00 0.00 6.13
3418 3867 1.472376 GGAGAATGTCAAGAGAGGGCG 60.472 57.143 0.00 0.00 0.00 6.13
3419 3868 1.472376 CGGAGAATGTCAAGAGAGGGC 60.472 57.143 0.00 0.00 0.00 5.19
3420 3869 1.472376 GCGGAGAATGTCAAGAGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
3421 3870 1.205655 TGCGGAGAATGTCAAGAGAGG 59.794 52.381 0.00 0.00 0.00 3.69
3422 3871 2.266554 GTGCGGAGAATGTCAAGAGAG 58.733 52.381 0.00 0.00 0.00 3.20
3423 3872 1.402852 CGTGCGGAGAATGTCAAGAGA 60.403 52.381 0.00 0.00 0.00 3.10
3424 3873 0.994995 CGTGCGGAGAATGTCAAGAG 59.005 55.000 0.00 0.00 0.00 2.85
3425 3874 1.014044 GCGTGCGGAGAATGTCAAGA 61.014 55.000 0.00 0.00 0.00 3.02
3426 3875 1.016130 AGCGTGCGGAGAATGTCAAG 61.016 55.000 0.00 0.00 0.00 3.02
3427 3876 0.602638 AAGCGTGCGGAGAATGTCAA 60.603 50.000 0.00 0.00 0.00 3.18
3428 3877 0.602638 AAAGCGTGCGGAGAATGTCA 60.603 50.000 0.00 0.00 0.00 3.58
3429 3878 1.324736 CTAAAGCGTGCGGAGAATGTC 59.675 52.381 0.00 0.00 0.00 3.06
3430 3879 1.359848 CTAAAGCGTGCGGAGAATGT 58.640 50.000 0.00 0.00 0.00 2.71
3431 3880 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.00 0.00 0.00 2.67
3432 3881 1.090052 GGCTAAAGCGTGCGGAGAAT 61.090 55.000 0.00 0.00 43.26 2.40
3433 3882 1.740296 GGCTAAAGCGTGCGGAGAA 60.740 57.895 0.00 0.00 43.26 2.87
3434 3883 2.125673 GGCTAAAGCGTGCGGAGA 60.126 61.111 0.00 0.00 43.26 3.71
3435 3884 3.554692 CGGCTAAAGCGTGCGGAG 61.555 66.667 0.00 0.00 43.26 4.63
3436 3885 4.367023 ACGGCTAAAGCGTGCGGA 62.367 61.111 0.00 0.00 43.26 5.54
3437 3886 3.849953 GACGGCTAAAGCGTGCGG 61.850 66.667 0.00 0.00 43.26 5.69
3438 3887 3.849953 GGACGGCTAAAGCGTGCG 61.850 66.667 0.00 1.74 43.26 5.34
3439 3888 3.849953 CGGACGGCTAAAGCGTGC 61.850 66.667 0.00 0.00 43.26 5.34
3440 3889 3.849953 GCGGACGGCTAAAGCGTG 61.850 66.667 0.00 0.00 43.26 5.34
3449 3898 3.264897 CAGTGCATAGCGGACGGC 61.265 66.667 0.00 0.00 41.69 5.68
3450 3899 2.586079 CCAGTGCATAGCGGACGG 60.586 66.667 0.00 0.00 41.69 4.79
3451 3900 1.589993 CTCCAGTGCATAGCGGACG 60.590 63.158 0.00 0.00 41.69 4.79
3452 3901 1.884926 GCTCCAGTGCATAGCGGAC 60.885 63.158 0.00 0.00 35.88 4.79
3453 3902 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
3454 3903 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
3455 3904 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
3456 3905 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
3457 3906 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
3458 3907 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
3459 3908 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
3460 3909 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
3461 3910 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
3462 3911 1.078567 GCCTCCAGAAGCTCCAGTG 60.079 63.158 0.00 0.00 0.00 3.66
3463 3912 2.297129 GGCCTCCAGAAGCTCCAGT 61.297 63.158 0.00 0.00 0.00 4.00
3464 3913 1.994507 AGGCCTCCAGAAGCTCCAG 60.995 63.158 0.00 0.00 0.00 3.86
3465 3914 2.123632 AGGCCTCCAGAAGCTCCA 59.876 61.111 0.00 0.00 0.00 3.86
3466 3915 2.588989 CAGGCCTCCAGAAGCTCC 59.411 66.667 0.00 0.00 0.00 4.70
3467 3916 2.124778 GCAGGCCTCCAGAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
3468 3917 4.093291 CGCAGGCCTCCAGAAGCT 62.093 66.667 0.00 0.00 0.00 3.74
3470 3919 4.093291 AGCGCAGGCCTCCAGAAG 62.093 66.667 11.47 0.00 41.24 2.85
3471 3920 4.399395 CAGCGCAGGCCTCCAGAA 62.399 66.667 11.47 0.00 41.24 3.02
3473 3922 2.315781 TATTCAGCGCAGGCCTCCAG 62.316 60.000 11.47 0.00 41.24 3.86
3474 3923 1.699054 ATATTCAGCGCAGGCCTCCA 61.699 55.000 11.47 0.00 41.24 3.86
3475 3924 1.072159 ATATTCAGCGCAGGCCTCC 59.928 57.895 11.47 0.00 41.24 4.30
3476 3925 1.849976 GCATATTCAGCGCAGGCCTC 61.850 60.000 11.47 0.00 41.24 4.70
3477 3926 1.895707 GCATATTCAGCGCAGGCCT 60.896 57.895 11.47 0.00 41.24 5.19
3478 3927 2.641559 GCATATTCAGCGCAGGCC 59.358 61.111 11.47 0.00 41.24 5.19
3479 3928 2.641559 GGCATATTCAGCGCAGGC 59.358 61.111 11.47 0.29 40.37 4.85
3480 3929 3.348236 GGGCATATTCAGCGCAGG 58.652 61.111 11.47 0.20 43.54 4.85
3483 3932 0.249031 GGTTTGGGCATATTCAGCGC 60.249 55.000 0.00 0.00 44.24 5.92
3484 3933 1.102154 TGGTTTGGGCATATTCAGCG 58.898 50.000 0.00 0.00 0.00 5.18
3485 3934 2.961062 AGATGGTTTGGGCATATTCAGC 59.039 45.455 0.00 0.00 0.00 4.26
3486 3935 4.209538 TGAGATGGTTTGGGCATATTCAG 58.790 43.478 0.00 0.00 0.00 3.02
3487 3936 4.248174 TGAGATGGTTTGGGCATATTCA 57.752 40.909 0.00 0.00 0.00 2.57
3488 3937 5.351458 GTTTGAGATGGTTTGGGCATATTC 58.649 41.667 0.00 0.00 0.00 1.75
3489 3938 4.142182 CGTTTGAGATGGTTTGGGCATATT 60.142 41.667 0.00 0.00 0.00 1.28
3490 3939 3.381272 CGTTTGAGATGGTTTGGGCATAT 59.619 43.478 0.00 0.00 0.00 1.78
3491 3940 2.752354 CGTTTGAGATGGTTTGGGCATA 59.248 45.455 0.00 0.00 0.00 3.14
3492 3941 1.545582 CGTTTGAGATGGTTTGGGCAT 59.454 47.619 0.00 0.00 0.00 4.40
3493 3942 0.958091 CGTTTGAGATGGTTTGGGCA 59.042 50.000 0.00 0.00 0.00 5.36
3494 3943 1.243902 TCGTTTGAGATGGTTTGGGC 58.756 50.000 0.00 0.00 0.00 5.36
3495 3944 3.255642 AACATCGTTTGAGATGGTTTGGG 59.744 43.478 11.06 0.00 45.46 4.12
3496 3945 4.229096 CAACATCGTTTGAGATGGTTTGG 58.771 43.478 11.06 0.00 45.46 3.28
3497 3946 4.023279 TCCAACATCGTTTGAGATGGTTTG 60.023 41.667 11.06 7.37 45.46 2.93
3498 3947 4.023193 GTCCAACATCGTTTGAGATGGTTT 60.023 41.667 11.06 0.00 45.46 3.27
3499 3948 3.502211 GTCCAACATCGTTTGAGATGGTT 59.498 43.478 11.06 1.84 45.46 3.67
3503 3952 3.189287 GCTTGTCCAACATCGTTTGAGAT 59.811 43.478 0.00 0.00 0.00 2.75
3504 3953 2.548057 GCTTGTCCAACATCGTTTGAGA 59.452 45.455 0.00 0.00 0.00 3.27
3505 3954 2.549754 AGCTTGTCCAACATCGTTTGAG 59.450 45.455 0.00 0.00 0.00 3.02
3506 3955 2.571212 AGCTTGTCCAACATCGTTTGA 58.429 42.857 0.00 0.00 0.00 2.69
3507 3956 3.003689 AGAAGCTTGTCCAACATCGTTTG 59.996 43.478 2.10 0.00 0.00 2.93
3508 3957 3.214328 AGAAGCTTGTCCAACATCGTTT 58.786 40.909 2.10 0.00 0.00 3.60
3509 3958 2.808543 GAGAAGCTTGTCCAACATCGTT 59.191 45.455 12.50 0.00 0.00 3.85
3510 3959 2.417719 GAGAAGCTTGTCCAACATCGT 58.582 47.619 12.50 0.00 0.00 3.73
3511 3960 1.734465 GGAGAAGCTTGTCCAACATCG 59.266 52.381 32.06 0.00 40.18 3.84
3512 3961 3.006247 GAGGAGAAGCTTGTCCAACATC 58.994 50.000 36.25 24.18 42.72 3.06
3513 3962 2.373169 TGAGGAGAAGCTTGTCCAACAT 59.627 45.455 36.25 20.88 42.72 2.71
3514 3963 1.768275 TGAGGAGAAGCTTGTCCAACA 59.232 47.619 36.25 30.84 42.72 3.33
3515 3964 2.550830 TGAGGAGAAGCTTGTCCAAC 57.449 50.000 36.25 29.11 42.72 3.77
3516 3965 3.795688 ATTGAGGAGAAGCTTGTCCAA 57.204 42.857 36.25 25.72 42.72 3.53
3517 3966 3.415212 CAATTGAGGAGAAGCTTGTCCA 58.585 45.455 36.25 21.34 42.72 4.02
3518 3967 2.751806 CCAATTGAGGAGAAGCTTGTCC 59.248 50.000 30.49 30.49 40.72 4.02
3519 3968 3.190118 CACCAATTGAGGAGAAGCTTGTC 59.810 47.826 15.04 15.04 0.00 3.18
3520 3969 3.152341 CACCAATTGAGGAGAAGCTTGT 58.848 45.455 2.10 0.00 0.00 3.16
3521 3970 2.094854 GCACCAATTGAGGAGAAGCTTG 60.095 50.000 2.10 0.00 0.00 4.01
3522 3971 2.165998 GCACCAATTGAGGAGAAGCTT 58.834 47.619 7.12 0.00 0.00 3.74
3523 3972 1.353694 AGCACCAATTGAGGAGAAGCT 59.646 47.619 7.12 3.13 0.00 3.74
3524 3973 1.831580 AGCACCAATTGAGGAGAAGC 58.168 50.000 7.12 0.92 0.00 3.86
3525 3974 3.274288 GGTAGCACCAATTGAGGAGAAG 58.726 50.000 7.12 0.00 38.42 2.85
3526 3975 2.026262 GGGTAGCACCAATTGAGGAGAA 60.026 50.000 7.12 0.00 41.02 2.87
3527 3976 1.559682 GGGTAGCACCAATTGAGGAGA 59.440 52.381 7.12 0.00 41.02 3.71
3528 3977 1.408822 GGGGTAGCACCAATTGAGGAG 60.409 57.143 7.12 0.00 41.02 3.69
3529 3978 0.623723 GGGGTAGCACCAATTGAGGA 59.376 55.000 7.12 0.00 41.02 3.71
3530 3979 0.331278 TGGGGTAGCACCAATTGAGG 59.669 55.000 7.12 0.00 41.02 3.86
3531 3980 2.214376 TTGGGGTAGCACCAATTGAG 57.786 50.000 7.12 0.00 42.75 3.02
3536 3985 3.332485 AGATAAAGTTGGGGTAGCACCAA 59.668 43.478 9.86 9.86 45.25 3.67
3537 3986 2.916934 AGATAAAGTTGGGGTAGCACCA 59.083 45.455 7.49 0.00 41.02 4.17
3538 3987 3.542648 GAGATAAAGTTGGGGTAGCACC 58.457 50.000 0.00 0.00 37.60 5.01
3539 3988 3.195661 CGAGATAAAGTTGGGGTAGCAC 58.804 50.000 0.00 0.00 0.00 4.40
3540 3989 2.835764 ACGAGATAAAGTTGGGGTAGCA 59.164 45.455 0.00 0.00 0.00 3.49
3541 3990 3.538634 ACGAGATAAAGTTGGGGTAGC 57.461 47.619 0.00 0.00 0.00 3.58
3542 3991 8.118976 TGATATACGAGATAAAGTTGGGGTAG 57.881 38.462 0.00 0.00 0.00 3.18
3543 3992 8.660295 ATGATATACGAGATAAAGTTGGGGTA 57.340 34.615 0.00 0.00 0.00 3.69
3544 3993 6.989155 TGATATACGAGATAAAGTTGGGGT 57.011 37.500 0.00 0.00 0.00 4.95
3545 3994 7.611770 TGATGATATACGAGATAAAGTTGGGG 58.388 38.462 0.00 0.00 0.00 4.96
3546 3995 9.658799 AATGATGATATACGAGATAAAGTTGGG 57.341 33.333 0.00 0.00 0.00 4.12
3549 3998 9.574458 CGGAATGATGATATACGAGATAAAGTT 57.426 33.333 0.00 0.00 0.00 2.66
3550 3999 8.191446 CCGGAATGATGATATACGAGATAAAGT 58.809 37.037 0.00 0.00 0.00 2.66
3551 4000 8.406297 TCCGGAATGATGATATACGAGATAAAG 58.594 37.037 0.00 0.00 0.00 1.85
3552 4001 8.188799 GTCCGGAATGATGATATACGAGATAAA 58.811 37.037 5.23 0.00 0.00 1.40
3553 4002 7.556635 AGTCCGGAATGATGATATACGAGATAA 59.443 37.037 5.23 0.00 0.00 1.75
3554 4003 7.054751 AGTCCGGAATGATGATATACGAGATA 58.945 38.462 5.23 0.00 0.00 1.98
3555 4004 5.888724 AGTCCGGAATGATGATATACGAGAT 59.111 40.000 5.23 0.00 0.00 2.75
3556 4005 5.254115 AGTCCGGAATGATGATATACGAGA 58.746 41.667 5.23 0.00 0.00 4.04
3557 4006 5.568685 AGTCCGGAATGATGATATACGAG 57.431 43.478 5.23 0.00 0.00 4.18
3558 4007 4.094442 CGAGTCCGGAATGATGATATACGA 59.906 45.833 10.26 0.00 0.00 3.43
3559 4008 4.094442 TCGAGTCCGGAATGATGATATACG 59.906 45.833 10.26 2.94 36.24 3.06
3560 4009 5.562506 TCGAGTCCGGAATGATGATATAC 57.437 43.478 10.26 0.00 36.24 1.47
3561 4010 5.299531 GGATCGAGTCCGGAATGATGATATA 59.700 44.000 10.26 0.00 37.23 0.86
3562 4011 4.098654 GGATCGAGTCCGGAATGATGATAT 59.901 45.833 10.26 0.00 37.23 1.63
3563 4012 3.444034 GGATCGAGTCCGGAATGATGATA 59.556 47.826 10.26 0.00 37.23 2.15
3564 4013 2.232452 GGATCGAGTCCGGAATGATGAT 59.768 50.000 10.26 9.95 37.23 2.45
3565 4014 1.613925 GGATCGAGTCCGGAATGATGA 59.386 52.381 10.26 4.67 37.23 2.92
3566 4015 2.071688 GGATCGAGTCCGGAATGATG 57.928 55.000 10.26 0.00 37.23 3.07
3576 4025 1.096416 ACACGAGGAAGGATCGAGTC 58.904 55.000 1.94 0.00 39.27 3.36
3577 4026 0.811915 CACACGAGGAAGGATCGAGT 59.188 55.000 1.94 0.00 43.22 4.18
3578 4027 0.101399 CCACACGAGGAAGGATCGAG 59.899 60.000 1.94 0.00 42.76 4.04
3579 4028 1.945354 GCCACACGAGGAAGGATCGA 61.945 60.000 1.94 0.00 42.76 3.59
3580 4029 1.519455 GCCACACGAGGAAGGATCG 60.519 63.158 0.00 0.00 45.54 3.69
3581 4030 1.153349 GGCCACACGAGGAAGGATC 60.153 63.158 0.00 0.00 0.00 3.36
3582 4031 1.918293 TGGCCACACGAGGAAGGAT 60.918 57.895 0.00 0.00 0.00 3.24
3583 4032 2.525629 TGGCCACACGAGGAAGGA 60.526 61.111 0.00 0.00 0.00 3.36
3584 4033 2.358737 GTGGCCACACGAGGAAGG 60.359 66.667 31.23 0.00 37.94 3.46
3594 4043 0.035152 TGAGATGGATGTGTGGCCAC 60.035 55.000 29.67 29.67 42.19 5.01
3595 4044 0.697658 TTGAGATGGATGTGTGGCCA 59.302 50.000 0.00 0.00 38.78 5.36
3596 4045 1.098050 GTTGAGATGGATGTGTGGCC 58.902 55.000 0.00 0.00 0.00 5.36
3597 4046 1.825090 TGTTGAGATGGATGTGTGGC 58.175 50.000 0.00 0.00 0.00 5.01
3598 4047 3.557185 CGTATGTTGAGATGGATGTGTGG 59.443 47.826 0.00 0.00 0.00 4.17
3599 4048 3.001634 GCGTATGTTGAGATGGATGTGTG 59.998 47.826 0.00 0.00 0.00 3.82
3600 4049 3.198068 GCGTATGTTGAGATGGATGTGT 58.802 45.455 0.00 0.00 0.00 3.72
3601 4050 3.197265 TGCGTATGTTGAGATGGATGTG 58.803 45.455 0.00 0.00 0.00 3.21
3602 4051 3.541996 TGCGTATGTTGAGATGGATGT 57.458 42.857 0.00 0.00 0.00 3.06
3603 4052 4.313282 AGATGCGTATGTTGAGATGGATG 58.687 43.478 0.00 0.00 0.00 3.51
3604 4053 4.562347 GGAGATGCGTATGTTGAGATGGAT 60.562 45.833 0.00 0.00 0.00 3.41
3605 4054 3.243873 GGAGATGCGTATGTTGAGATGGA 60.244 47.826 0.00 0.00 0.00 3.41
3606 4055 3.062763 GGAGATGCGTATGTTGAGATGG 58.937 50.000 0.00 0.00 0.00 3.51
3607 4056 2.728318 CGGAGATGCGTATGTTGAGATG 59.272 50.000 0.00 0.00 0.00 2.90
3608 4057 2.864097 GCGGAGATGCGTATGTTGAGAT 60.864 50.000 0.00 0.00 0.00 2.75
3609 4058 1.536072 GCGGAGATGCGTATGTTGAGA 60.536 52.381 0.00 0.00 0.00 3.27
3610 4059 0.855349 GCGGAGATGCGTATGTTGAG 59.145 55.000 0.00 0.00 0.00 3.02
3611 4060 0.529773 GGCGGAGATGCGTATGTTGA 60.530 55.000 0.00 0.00 35.06 3.18
3612 4061 0.809636 TGGCGGAGATGCGTATGTTG 60.810 55.000 0.00 0.00 35.06 3.33
3613 4062 0.810031 GTGGCGGAGATGCGTATGTT 60.810 55.000 0.00 0.00 35.06 2.71
3614 4063 1.227263 GTGGCGGAGATGCGTATGT 60.227 57.895 0.00 0.00 35.06 2.29
3615 4064 1.227234 TGTGGCGGAGATGCGTATG 60.227 57.895 0.00 0.00 35.06 2.39
3616 4065 1.227263 GTGTGGCGGAGATGCGTAT 60.227 57.895 0.00 0.00 35.06 3.06
3617 4066 2.183300 GTGTGGCGGAGATGCGTA 59.817 61.111 0.00 0.00 35.06 4.42
3618 4067 4.760047 GGTGTGGCGGAGATGCGT 62.760 66.667 0.00 0.00 35.06 5.24
3619 4068 2.572095 TTAGGTGTGGCGGAGATGCG 62.572 60.000 0.00 0.00 35.06 4.73
3620 4069 1.090052 GTTAGGTGTGGCGGAGATGC 61.090 60.000 0.00 0.00 0.00 3.91
3621 4070 0.537188 AGTTAGGTGTGGCGGAGATG 59.463 55.000 0.00 0.00 0.00 2.90
3622 4071 0.537188 CAGTTAGGTGTGGCGGAGAT 59.463 55.000 0.00 0.00 0.00 2.75
3623 4072 0.830444 ACAGTTAGGTGTGGCGGAGA 60.830 55.000 0.00 0.00 0.00 3.71
3624 4073 0.034896 AACAGTTAGGTGTGGCGGAG 59.965 55.000 0.00 0.00 0.00 4.63
3625 4074 0.250124 CAACAGTTAGGTGTGGCGGA 60.250 55.000 0.00 0.00 0.00 5.54
3626 4075 0.250124 TCAACAGTTAGGTGTGGCGG 60.250 55.000 0.00 0.00 35.97 6.13
3627 4076 1.263217 GTTCAACAGTTAGGTGTGGCG 59.737 52.381 0.00 0.00 35.97 5.69
3628 4077 2.294074 TGTTCAACAGTTAGGTGTGGC 58.706 47.619 0.00 0.00 35.97 5.01
3629 4078 4.133820 TCATGTTCAACAGTTAGGTGTGG 58.866 43.478 0.00 0.00 35.97 4.17
3630 4079 5.947228 ATCATGTTCAACAGTTAGGTGTG 57.053 39.130 0.00 0.00 35.97 3.82
3631 4080 9.733556 TTATTATCATGTTCAACAGTTAGGTGT 57.266 29.630 0.00 0.00 35.97 4.16
3722 4176 5.300752 AGAACTGAAGGTACAATGTCTGTG 58.699 41.667 0.00 0.00 39.20 3.66
3965 4492 9.219603 GTGCATACATATATCCATACAACTGTT 57.780 33.333 0.00 0.00 0.00 3.16
3996 8425 7.063780 GGTGTGCATTTTGGAAAGATTTCTATG 59.936 37.037 5.37 5.88 37.35 2.23
3997 8426 7.099120 GGTGTGCATTTTGGAAAGATTTCTAT 58.901 34.615 5.37 0.00 37.35 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.