Multiple sequence alignment - TraesCS7B01G473600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G473600 chr7B 100.000 4995 0 0 1 4995 730173823 730168829 0.000000e+00 9225.0
1 TraesCS7B01G473600 chr7B 98.494 797 12 0 4199 4995 560520868 560521664 0.000000e+00 1406.0
2 TraesCS7B01G473600 chr7B 80.942 467 55 16 3729 4188 730164669 730164230 6.190000e-89 339.0
3 TraesCS7B01G473600 chrUn 92.108 2775 151 34 860 3602 92742177 92739439 0.000000e+00 3849.0
4 TraesCS7B01G473600 chrUn 96.180 445 15 1 3672 4116 92739442 92739000 0.000000e+00 726.0
5 TraesCS7B01G473600 chrUn 88.636 220 22 3 3738 3957 92727350 92727134 1.070000e-66 265.0
6 TraesCS7B01G473600 chrUn 94.595 74 4 0 4118 4191 92738911 92738838 1.140000e-21 115.0
7 TraesCS7B01G473600 chrUn 90.164 61 4 1 3617 3675 15903957 15904017 1.490000e-10 78.7
8 TraesCS7B01G473600 chrUn 90.000 60 5 1 9 67 28337429 28337488 5.360000e-10 76.8
9 TraesCS7B01G473600 chr7A 96.702 1607 49 4 1999 3602 724129935 724128330 0.000000e+00 2671.0
10 TraesCS7B01G473600 chr7A 84.596 1188 110 32 859 2004 724131191 724130035 0.000000e+00 1112.0
11 TraesCS7B01G473600 chr7A 96.861 446 11 2 3672 4116 724128333 724127890 0.000000e+00 743.0
12 TraesCS7B01G473600 chr7A 91.638 287 23 1 265 551 724133456 724133171 3.620000e-106 396.0
13 TraesCS7B01G473600 chr7A 93.243 74 5 0 4118 4191 724127801 724127728 5.290000e-20 110.0
14 TraesCS7B01G473600 chr7A 87.209 86 11 0 702 787 724133113 724133028 1.140000e-16 99.0
15 TraesCS7B01G473600 chr7A 96.000 50 2 0 19 68 164447339 164447388 1.150000e-11 82.4
16 TraesCS7B01G473600 chr7A 97.826 46 1 0 3630 3675 622369542 622369587 4.150000e-11 80.5
17 TraesCS7B01G473600 chr1B 98.996 797 8 0 4199 4995 612996059 612996855 0.000000e+00 1428.0
18 TraesCS7B01G473600 chr4B 97.992 797 14 2 4199 4995 586028679 586027885 0.000000e+00 1382.0
19 TraesCS7B01G473600 chr4B 86.420 81 6 2 3601 3676 172380001 172380081 3.200000e-12 84.2
20 TraesCS7B01G473600 chr3B 95.614 798 33 2 4199 4995 545055404 545054608 0.000000e+00 1279.0
21 TraesCS7B01G473600 chr3B 95.833 48 2 0 3627 3674 126578552 126578599 1.490000e-10 78.7
22 TraesCS7B01G473600 chr6B 93.225 797 54 0 4199 4995 585802603 585803399 0.000000e+00 1173.0
23 TraesCS7B01G473600 chr7D 89.447 796 84 0 4199 4994 576591684 576592479 0.000000e+00 1005.0
24 TraesCS7B01G473600 chr7D 89.831 59 5 1 13 71 628199567 628199510 1.930000e-09 75.0
25 TraesCS7B01G473600 chr3D 88.708 797 90 0 4199 4995 584936970 584936174 0.000000e+00 974.0
26 TraesCS7B01G473600 chr3D 88.136 59 5 2 3634 3691 75148000 75147943 8.970000e-08 69.4
27 TraesCS7B01G473600 chr6A 86.859 799 101 3 4199 4995 18096129 18095333 0.000000e+00 891.0
28 TraesCS7B01G473600 chr4A 86.181 796 99 7 4206 4995 590211874 590212664 0.000000e+00 850.0
29 TraesCS7B01G473600 chr4D 85.325 477 61 5 2833 3309 497247369 497246902 7.520000e-133 484.0
30 TraesCS7B01G473600 chr4D 86.228 334 40 6 2087 2420 497248108 497247781 1.710000e-94 357.0
31 TraesCS7B01G473600 chr4D 97.917 48 1 0 21 68 473133548 473133501 3.200000e-12 84.2
32 TraesCS7B01G473600 chr4D 89.831 59 4 1 3620 3676 30221548 30221490 1.930000e-09 75.0
33 TraesCS7B01G473600 chr2B 94.340 53 3 0 19 71 766523846 766523794 1.150000e-11 82.4
34 TraesCS7B01G473600 chr2B 91.228 57 5 0 18 74 527667577 527667521 1.490000e-10 78.7
35 TraesCS7B01G473600 chr5D 94.340 53 1 2 17 68 180472166 180472115 4.150000e-11 80.5
36 TraesCS7B01G473600 chr5D 89.655 58 4 1 3620 3675 326457855 326457912 6.940000e-09 73.1
37 TraesCS7B01G473600 chr2D 91.228 57 5 0 18 74 447846189 447846133 1.490000e-10 78.7
38 TraesCS7B01G473600 chr3A 83.529 85 9 2 3597 3676 95018431 95018347 1.930000e-09 75.0
39 TraesCS7B01G473600 chr5A 89.655 58 4 1 3620 3675 429984336 429984279 6.940000e-09 73.1
40 TraesCS7B01G473600 chr1A 85.915 71 7 3 4 71 590991980 590991910 6.940000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G473600 chr7B 730168829 730173823 4994 True 9225.000000 9225 100.000000 1 4995 1 chr7B.!!$R2 4994
1 TraesCS7B01G473600 chr7B 560520868 560521664 796 False 1406.000000 1406 98.494000 4199 4995 1 chr7B.!!$F1 796
2 TraesCS7B01G473600 chrUn 92738838 92742177 3339 True 1563.333333 3849 94.294333 860 4191 3 chrUn.!!$R2 3331
3 TraesCS7B01G473600 chr7A 724127728 724133456 5728 True 855.166667 2671 91.708167 265 4191 6 chr7A.!!$R1 3926
4 TraesCS7B01G473600 chr1B 612996059 612996855 796 False 1428.000000 1428 98.996000 4199 4995 1 chr1B.!!$F1 796
5 TraesCS7B01G473600 chr4B 586027885 586028679 794 True 1382.000000 1382 97.992000 4199 4995 1 chr4B.!!$R1 796
6 TraesCS7B01G473600 chr3B 545054608 545055404 796 True 1279.000000 1279 95.614000 4199 4995 1 chr3B.!!$R1 796
7 TraesCS7B01G473600 chr6B 585802603 585803399 796 False 1173.000000 1173 93.225000 4199 4995 1 chr6B.!!$F1 796
8 TraesCS7B01G473600 chr7D 576591684 576592479 795 False 1005.000000 1005 89.447000 4199 4994 1 chr7D.!!$F1 795
9 TraesCS7B01G473600 chr3D 584936174 584936970 796 True 974.000000 974 88.708000 4199 4995 1 chr3D.!!$R2 796
10 TraesCS7B01G473600 chr6A 18095333 18096129 796 True 891.000000 891 86.859000 4199 4995 1 chr6A.!!$R1 796
11 TraesCS7B01G473600 chr4A 590211874 590212664 790 False 850.000000 850 86.181000 4206 4995 1 chr4A.!!$F1 789
12 TraesCS7B01G473600 chr4D 497246902 497248108 1206 True 420.500000 484 85.776500 2087 3309 2 chr4D.!!$R3 1222

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 638 0.038618 CTTTACAAAGGCGGGCAACC 60.039 55.0 3.78 0.00 42.35 3.77 F
699 700 0.108520 AAGGCCATGCTCAAATTGCG 60.109 50.0 5.01 0.00 0.00 4.85 F
1528 3362 0.106819 CCAGCCCAGGAATCTTGGAG 60.107 60.0 13.40 4.40 0.00 3.86 F
1869 3703 0.174389 CACTGGACACCGGATCAGAG 59.826 60.0 9.46 7.74 33.36 3.35 F
3617 5688 0.115745 AGTACTCCCTCCGACCCAAA 59.884 55.0 0.00 0.00 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1509 3340 0.106819 CTCCAAGATTCCTGGGCTGG 60.107 60.0 1.45 0.0 33.23 4.85 R
2388 4328 0.110295 TGTCCATATTGGCATCCCCG 59.890 55.0 0.00 0.0 37.47 5.73 R
2503 4519 0.318441 CAGAACAAGAGAGGGCGACA 59.682 55.0 0.00 0.0 0.00 4.35 R
3657 5728 0.178970 GCTACTCCCTCCGACCCATA 60.179 60.0 0.00 0.0 0.00 2.74 R
4420 6587 0.533491 GCAATCAAGCAGCAATGGGA 59.467 50.0 0.00 0.0 0.00 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.738645 AAAACATTTGTCTATCATCTACTCCC 57.261 34.615 0.00 0.00 0.00 4.30
31 32 7.682787 AACATTTGTCTATCATCTACTCCCT 57.317 36.000 0.00 0.00 0.00 4.20
32 33 7.296628 ACATTTGTCTATCATCTACTCCCTC 57.703 40.000 0.00 0.00 0.00 4.30
33 34 6.268847 ACATTTGTCTATCATCTACTCCCTCC 59.731 42.308 0.00 0.00 0.00 4.30
34 35 4.022413 TGTCTATCATCTACTCCCTCCG 57.978 50.000 0.00 0.00 0.00 4.63
35 36 3.394940 TGTCTATCATCTACTCCCTCCGT 59.605 47.826 0.00 0.00 0.00 4.69
36 37 4.004982 GTCTATCATCTACTCCCTCCGTC 58.995 52.174 0.00 0.00 0.00 4.79
37 38 2.296073 ATCATCTACTCCCTCCGTCC 57.704 55.000 0.00 0.00 0.00 4.79
38 39 0.185416 TCATCTACTCCCTCCGTCCC 59.815 60.000 0.00 0.00 0.00 4.46
39 40 0.106167 CATCTACTCCCTCCGTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
40 41 0.635009 ATCTACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
41 42 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
42 43 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
43 44 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
44 45 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
45 46 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
46 47 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
47 48 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
48 49 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
49 50 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
50 51 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
51 52 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
52 53 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
53 54 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
54 55 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
55 56 4.700213 CCGTCCCAAAATAAGTGACTCAAT 59.300 41.667 0.00 0.00 0.00 2.57
56 57 5.183140 CCGTCCCAAAATAAGTGACTCAATT 59.817 40.000 0.00 0.00 0.00 2.32
57 58 6.294508 CCGTCCCAAAATAAGTGACTCAATTT 60.295 38.462 0.00 0.00 0.00 1.82
58 59 7.145323 CGTCCCAAAATAAGTGACTCAATTTT 58.855 34.615 10.89 10.89 33.07 1.82
59 60 8.293867 CGTCCCAAAATAAGTGACTCAATTTTA 58.706 33.333 14.43 2.50 31.97 1.52
83 84 9.696572 TTATACTAACTGTACATCCTGTCTTCT 57.303 33.333 0.00 0.00 33.45 2.85
85 86 9.696572 ATACTAACTGTACATCCTGTCTTCTAA 57.303 33.333 0.00 0.00 33.45 2.10
86 87 8.596781 ACTAACTGTACATCCTGTCTTCTAAT 57.403 34.615 0.00 0.00 0.00 1.73
87 88 9.696572 ACTAACTGTACATCCTGTCTTCTAATA 57.303 33.333 0.00 0.00 0.00 0.98
91 92 9.654663 ACTGTACATCCTGTCTTCTAATAAAAC 57.345 33.333 0.00 0.00 0.00 2.43
92 93 9.653287 CTGTACATCCTGTCTTCTAATAAAACA 57.347 33.333 0.00 0.00 0.00 2.83
93 94 9.431887 TGTACATCCTGTCTTCTAATAAAACAC 57.568 33.333 0.00 0.00 0.00 3.32
94 95 9.431887 GTACATCCTGTCTTCTAATAAAACACA 57.568 33.333 0.00 0.00 0.00 3.72
95 96 8.553459 ACATCCTGTCTTCTAATAAAACACAG 57.447 34.615 0.00 0.00 0.00 3.66
96 97 8.375506 ACATCCTGTCTTCTAATAAAACACAGA 58.624 33.333 0.00 0.00 33.10 3.41
97 98 9.388506 CATCCTGTCTTCTAATAAAACACAGAT 57.611 33.333 0.00 0.00 33.10 2.90
100 101 9.877178 CCTGTCTTCTAATAAAACACAGATAGT 57.123 33.333 0.00 0.00 33.10 2.12
111 112 2.893637 CACAGATAGTGCCGCTAAAGT 58.106 47.619 0.00 0.00 42.15 2.66
112 113 4.041740 CACAGATAGTGCCGCTAAAGTA 57.958 45.455 0.00 0.00 42.15 2.24
113 114 4.045104 CACAGATAGTGCCGCTAAAGTAG 58.955 47.826 0.00 0.00 42.15 2.57
114 115 3.952323 ACAGATAGTGCCGCTAAAGTAGA 59.048 43.478 0.00 0.00 32.72 2.59
115 116 4.401519 ACAGATAGTGCCGCTAAAGTAGAA 59.598 41.667 0.00 0.00 32.72 2.10
116 117 4.740695 CAGATAGTGCCGCTAAAGTAGAAC 59.259 45.833 0.00 0.00 32.72 3.01
117 118 4.401519 AGATAGTGCCGCTAAAGTAGAACA 59.598 41.667 0.00 0.00 32.72 3.18
118 119 2.685100 AGTGCCGCTAAAGTAGAACAC 58.315 47.619 0.00 0.00 0.00 3.32
119 120 1.389106 GTGCCGCTAAAGTAGAACACG 59.611 52.381 0.00 0.00 0.00 4.49
120 121 1.270274 TGCCGCTAAAGTAGAACACGA 59.730 47.619 0.00 0.00 0.00 4.35
121 122 2.094390 TGCCGCTAAAGTAGAACACGAT 60.094 45.455 0.00 0.00 0.00 3.73
122 123 2.281762 GCCGCTAAAGTAGAACACGATG 59.718 50.000 0.00 0.00 0.00 3.84
123 124 3.508762 CCGCTAAAGTAGAACACGATGT 58.491 45.455 0.00 0.00 0.00 3.06
124 125 3.924686 CCGCTAAAGTAGAACACGATGTT 59.075 43.478 3.52 3.52 44.37 2.71
125 126 4.387862 CCGCTAAAGTAGAACACGATGTTT 59.612 41.667 0.00 0.00 41.28 2.83
126 127 5.574055 CCGCTAAAGTAGAACACGATGTTTA 59.426 40.000 0.00 0.00 41.28 2.01
127 128 6.255020 CCGCTAAAGTAGAACACGATGTTTAT 59.745 38.462 0.00 0.00 41.28 1.40
128 129 7.433131 CCGCTAAAGTAGAACACGATGTTTATA 59.567 37.037 0.00 0.00 41.28 0.98
129 130 8.965172 CGCTAAAGTAGAACACGATGTTTATAT 58.035 33.333 0.00 0.00 41.28 0.86
153 154 7.538303 TTCTTTTCAAGAAATTTGCAGGAAC 57.462 32.000 0.00 0.00 44.10 3.62
154 155 6.638610 TCTTTTCAAGAAATTTGCAGGAACA 58.361 32.000 0.00 0.00 33.83 3.18
155 156 6.534793 TCTTTTCAAGAAATTTGCAGGAACAC 59.465 34.615 0.00 0.00 33.83 3.32
156 157 5.596836 TTCAAGAAATTTGCAGGAACACT 57.403 34.783 0.00 0.00 0.00 3.55
157 158 5.186996 TCAAGAAATTTGCAGGAACACTC 57.813 39.130 0.00 0.00 0.00 3.51
158 159 4.889409 TCAAGAAATTTGCAGGAACACTCT 59.111 37.500 0.00 0.00 0.00 3.24
159 160 5.009010 TCAAGAAATTTGCAGGAACACTCTC 59.991 40.000 0.00 0.00 0.00 3.20
160 161 4.723309 AGAAATTTGCAGGAACACTCTCT 58.277 39.130 0.00 0.00 0.00 3.10
161 162 5.136105 AGAAATTTGCAGGAACACTCTCTT 58.864 37.500 0.00 0.00 0.00 2.85
162 163 5.595952 AGAAATTTGCAGGAACACTCTCTTT 59.404 36.000 0.00 0.00 0.00 2.52
163 164 5.859205 AATTTGCAGGAACACTCTCTTTT 57.141 34.783 0.00 0.00 0.00 2.27
164 165 6.959639 AATTTGCAGGAACACTCTCTTTTA 57.040 33.333 0.00 0.00 0.00 1.52
165 166 6.566197 ATTTGCAGGAACACTCTCTTTTAG 57.434 37.500 0.00 0.00 0.00 1.85
166 167 4.689612 TGCAGGAACACTCTCTTTTAGT 57.310 40.909 0.00 0.00 0.00 2.24
167 168 5.036117 TGCAGGAACACTCTCTTTTAGTT 57.964 39.130 0.00 0.00 0.00 2.24
168 169 6.169557 TGCAGGAACACTCTCTTTTAGTTA 57.830 37.500 0.00 0.00 0.00 2.24
169 170 6.223852 TGCAGGAACACTCTCTTTTAGTTAG 58.776 40.000 0.00 0.00 0.00 2.34
170 171 5.639931 GCAGGAACACTCTCTTTTAGTTAGG 59.360 44.000 0.00 0.00 0.00 2.69
171 172 6.518537 GCAGGAACACTCTCTTTTAGTTAGGA 60.519 42.308 0.00 0.00 0.00 2.94
172 173 7.442656 CAGGAACACTCTCTTTTAGTTAGGAA 58.557 38.462 0.00 0.00 0.00 3.36
173 174 7.931948 CAGGAACACTCTCTTTTAGTTAGGAAA 59.068 37.037 0.00 0.00 0.00 3.13
174 175 7.932491 AGGAACACTCTCTTTTAGTTAGGAAAC 59.068 37.037 0.00 0.00 35.72 2.78
175 176 7.713942 GGAACACTCTCTTTTAGTTAGGAAACA 59.286 37.037 0.00 0.00 38.12 2.83
176 177 8.664211 AACACTCTCTTTTAGTTAGGAAACAG 57.336 34.615 0.00 0.00 38.12 3.16
177 178 8.019656 ACACTCTCTTTTAGTTAGGAAACAGA 57.980 34.615 0.00 0.00 38.12 3.41
178 179 8.145122 ACACTCTCTTTTAGTTAGGAAACAGAG 58.855 37.037 0.00 0.00 38.12 3.35
179 180 8.145122 CACTCTCTTTTAGTTAGGAAACAGAGT 58.855 37.037 0.00 0.00 37.06 3.24
180 181 8.706521 ACTCTCTTTTAGTTAGGAAACAGAGTT 58.293 33.333 0.00 0.00 35.05 3.01
210 211 8.927675 TTACATACTATGAGGTTGTTTTTGGT 57.072 30.769 2.90 0.00 0.00 3.67
211 212 7.214467 ACATACTATGAGGTTGTTTTTGGTG 57.786 36.000 2.90 0.00 0.00 4.17
212 213 7.001674 ACATACTATGAGGTTGTTTTTGGTGA 58.998 34.615 2.90 0.00 0.00 4.02
213 214 7.504238 ACATACTATGAGGTTGTTTTTGGTGAA 59.496 33.333 2.90 0.00 0.00 3.18
214 215 6.783708 ACTATGAGGTTGTTTTTGGTGAAA 57.216 33.333 0.00 0.00 0.00 2.69
215 216 6.569780 ACTATGAGGTTGTTTTTGGTGAAAC 58.430 36.000 0.00 0.00 39.41 2.78
216 217 4.873746 TGAGGTTGTTTTTGGTGAAACA 57.126 36.364 0.00 0.00 45.07 2.83
224 225 3.515611 TGGTGAAACAACCACGCC 58.484 55.556 0.00 0.00 45.43 5.68
225 226 2.122167 TGGTGAAACAACCACGCCC 61.122 57.895 0.00 0.00 45.43 6.13
226 227 2.122167 GGTGAAACAACCACGCCCA 61.122 57.895 0.00 0.00 39.98 5.36
227 228 1.668101 GGTGAAACAACCACGCCCAA 61.668 55.000 0.00 0.00 39.98 4.12
228 229 0.173708 GTGAAACAACCACGCCCAAA 59.826 50.000 0.00 0.00 36.32 3.28
229 230 1.115467 TGAAACAACCACGCCCAAAT 58.885 45.000 0.00 0.00 0.00 2.32
230 231 1.202463 TGAAACAACCACGCCCAAATG 60.202 47.619 0.00 0.00 0.00 2.32
231 232 0.105778 AAACAACCACGCCCAAATGG 59.894 50.000 0.00 0.00 42.13 3.16
240 241 4.635769 CCCAAATGGCGCTCTACA 57.364 55.556 7.64 0.00 0.00 2.74
241 242 3.100545 CCCAAATGGCGCTCTACAT 57.899 52.632 7.64 0.00 0.00 2.29
242 243 2.254546 CCCAAATGGCGCTCTACATA 57.745 50.000 7.64 0.00 0.00 2.29
243 244 1.873591 CCCAAATGGCGCTCTACATAC 59.126 52.381 7.64 0.00 0.00 2.39
244 245 2.485479 CCCAAATGGCGCTCTACATACT 60.485 50.000 7.64 0.00 0.00 2.12
245 246 2.802816 CCAAATGGCGCTCTACATACTC 59.197 50.000 7.64 0.00 0.00 2.59
246 247 3.493350 CCAAATGGCGCTCTACATACTCT 60.493 47.826 7.64 0.00 0.00 3.24
247 248 4.262036 CCAAATGGCGCTCTACATACTCTA 60.262 45.833 7.64 0.00 0.00 2.43
248 249 5.289595 CAAATGGCGCTCTACATACTCTAA 58.710 41.667 7.64 0.00 0.00 2.10
249 250 4.775058 ATGGCGCTCTACATACTCTAAG 57.225 45.455 7.64 0.00 0.00 2.18
250 251 3.552875 TGGCGCTCTACATACTCTAAGT 58.447 45.455 7.64 0.00 0.00 2.24
251 252 4.711399 TGGCGCTCTACATACTCTAAGTA 58.289 43.478 7.64 0.00 34.82 2.24
252 253 5.128205 TGGCGCTCTACATACTCTAAGTAA 58.872 41.667 7.64 0.00 33.89 2.24
253 254 5.591472 TGGCGCTCTACATACTCTAAGTAAA 59.409 40.000 7.64 0.00 33.89 2.01
254 255 6.264744 TGGCGCTCTACATACTCTAAGTAAAT 59.735 38.462 7.64 0.00 33.89 1.40
255 256 7.146648 GGCGCTCTACATACTCTAAGTAAATT 58.853 38.462 7.64 0.00 33.89 1.82
256 257 7.652507 GGCGCTCTACATACTCTAAGTAAATTT 59.347 37.037 7.64 0.00 33.89 1.82
257 258 8.480853 GCGCTCTACATACTCTAAGTAAATTTG 58.519 37.037 0.00 0.00 33.89 2.32
258 259 9.517609 CGCTCTACATACTCTAAGTAAATTTGT 57.482 33.333 0.00 0.00 33.89 2.83
318 319 5.524535 CCCCAAATAGATTAACCCAAGGAA 58.475 41.667 0.00 0.00 0.00 3.36
346 347 2.098770 GTCATGCATGCTCCTTTCCTTC 59.901 50.000 22.25 0.00 0.00 3.46
351 352 2.731572 CATGCTCCTTTCCTTCCACAT 58.268 47.619 0.00 0.00 0.00 3.21
355 356 3.055094 TGCTCCTTTCCTTCCACATACTC 60.055 47.826 0.00 0.00 0.00 2.59
370 371 5.005682 CCACATACTCAACATGACATACACG 59.994 44.000 0.00 0.00 0.00 4.49
420 421 0.308684 CGCATTCCACCAATCATCGG 59.691 55.000 0.00 0.00 0.00 4.18
425 426 2.180204 CCACCAATCATCGGCCGAC 61.180 63.158 33.75 0.00 0.00 4.79
475 476 2.610374 GCGAAACCACTAGTTGACAACA 59.390 45.455 20.08 5.81 39.19 3.33
478 479 5.440685 CGAAACCACTAGTTGACAACAATC 58.559 41.667 20.08 5.63 39.19 2.67
501 502 3.623960 CCACACTTTGTACGGTGAAAGAA 59.376 43.478 16.74 0.00 37.22 2.52
521 522 4.333926 AGAACAATCTTTATGAAGGCGAGC 59.666 41.667 0.00 0.00 33.56 5.03
528 529 0.618458 TATGAAGGCGAGCAACCCTT 59.382 50.000 1.95 1.95 43.87 3.95
553 554 8.989653 TTTTTGAAACGGAAAGACATAAAGTT 57.010 26.923 0.00 0.00 0.00 2.66
555 556 6.308371 TGAAACGGAAAGACATAAAGTTCC 57.692 37.500 0.00 0.00 36.89 3.62
556 557 5.239963 TGAAACGGAAAGACATAAAGTTCCC 59.760 40.000 0.00 0.00 36.91 3.97
557 558 3.682696 ACGGAAAGACATAAAGTTCCCC 58.317 45.455 0.00 0.00 36.91 4.81
558 559 3.014623 CGGAAAGACATAAAGTTCCCCC 58.985 50.000 0.00 0.00 36.91 5.40
559 560 3.308188 CGGAAAGACATAAAGTTCCCCCT 60.308 47.826 0.00 0.00 36.91 4.79
560 561 4.270834 GGAAAGACATAAAGTTCCCCCTC 58.729 47.826 0.00 0.00 34.62 4.30
561 562 4.018324 GGAAAGACATAAAGTTCCCCCTCT 60.018 45.833 0.00 0.00 34.62 3.69
562 563 5.516768 GGAAAGACATAAAGTTCCCCCTCTT 60.517 44.000 0.00 0.00 34.62 2.85
563 564 5.600669 AAGACATAAAGTTCCCCCTCTTT 57.399 39.130 0.00 0.00 37.58 2.52
564 565 5.600669 AGACATAAAGTTCCCCCTCTTTT 57.399 39.130 0.00 0.00 35.79 2.27
565 566 5.965486 AGACATAAAGTTCCCCCTCTTTTT 58.035 37.500 0.00 0.00 35.79 1.94
566 567 7.098845 AGACATAAAGTTCCCCCTCTTTTTA 57.901 36.000 0.00 0.00 35.79 1.52
567 568 7.175797 AGACATAAAGTTCCCCCTCTTTTTAG 58.824 38.462 0.00 0.00 35.79 1.85
568 569 6.253758 ACATAAAGTTCCCCCTCTTTTTAGG 58.746 40.000 0.00 0.00 35.79 2.69
569 570 2.901338 AGTTCCCCCTCTTTTTAGGC 57.099 50.000 0.00 0.00 35.09 3.93
570 571 2.070573 AGTTCCCCCTCTTTTTAGGCA 58.929 47.619 0.00 0.00 35.09 4.75
571 572 2.041755 AGTTCCCCCTCTTTTTAGGCAG 59.958 50.000 0.00 0.00 35.09 4.85
572 573 0.999712 TCCCCCTCTTTTTAGGCAGG 59.000 55.000 0.00 0.00 35.09 4.85
573 574 0.704664 CCCCCTCTTTTTAGGCAGGT 59.295 55.000 0.00 0.00 35.09 4.00
574 575 1.616994 CCCCCTCTTTTTAGGCAGGTG 60.617 57.143 0.00 0.00 35.09 4.00
575 576 1.075536 CCCCTCTTTTTAGGCAGGTGT 59.924 52.381 0.00 0.00 35.09 4.16
576 577 2.162681 CCCTCTTTTTAGGCAGGTGTG 58.837 52.381 0.00 0.00 35.09 3.82
577 578 2.162681 CCTCTTTTTAGGCAGGTGTGG 58.837 52.381 0.00 0.00 0.00 4.17
578 579 2.489073 CCTCTTTTTAGGCAGGTGTGGT 60.489 50.000 0.00 0.00 0.00 4.16
579 580 2.814336 CTCTTTTTAGGCAGGTGTGGTC 59.186 50.000 0.00 0.00 0.00 4.02
580 581 2.173782 TCTTTTTAGGCAGGTGTGGTCA 59.826 45.455 0.00 0.00 0.00 4.02
581 582 2.270352 TTTTAGGCAGGTGTGGTCAG 57.730 50.000 0.00 0.00 0.00 3.51
582 583 0.250727 TTTAGGCAGGTGTGGTCAGC 60.251 55.000 0.00 0.00 41.73 4.26
589 590 3.698250 GGTGTGGTCAGCTGTTACA 57.302 52.632 14.67 14.02 38.80 2.41
590 591 1.961793 GGTGTGGTCAGCTGTTACAA 58.038 50.000 14.67 0.00 38.80 2.41
591 592 2.294074 GGTGTGGTCAGCTGTTACAAA 58.706 47.619 14.67 3.77 38.80 2.83
592 593 2.032924 GGTGTGGTCAGCTGTTACAAAC 59.967 50.000 14.67 15.10 38.80 2.93
593 594 2.943033 GTGTGGTCAGCTGTTACAAACT 59.057 45.455 14.67 0.00 0.00 2.66
594 595 4.124238 GTGTGGTCAGCTGTTACAAACTA 58.876 43.478 14.67 0.00 0.00 2.24
595 596 4.573201 GTGTGGTCAGCTGTTACAAACTAA 59.427 41.667 14.67 0.00 0.00 2.24
596 597 5.065474 GTGTGGTCAGCTGTTACAAACTAAA 59.935 40.000 14.67 0.00 0.00 1.85
597 598 5.648526 TGTGGTCAGCTGTTACAAACTAAAA 59.351 36.000 14.67 0.00 0.00 1.52
598 599 6.320164 TGTGGTCAGCTGTTACAAACTAAAAT 59.680 34.615 14.67 0.00 0.00 1.82
599 600 6.636850 GTGGTCAGCTGTTACAAACTAAAATG 59.363 38.462 14.67 0.00 0.00 2.32
600 601 6.544197 TGGTCAGCTGTTACAAACTAAAATGA 59.456 34.615 14.67 0.00 0.00 2.57
601 602 7.230510 TGGTCAGCTGTTACAAACTAAAATGAT 59.769 33.333 14.67 0.00 0.00 2.45
602 603 8.726988 GGTCAGCTGTTACAAACTAAAATGATA 58.273 33.333 14.67 0.00 0.00 2.15
629 630 4.790765 AAGGAGCAATCTTTACAAAGGC 57.209 40.909 2.04 0.00 36.67 4.35
630 631 2.749621 AGGAGCAATCTTTACAAAGGCG 59.250 45.455 2.04 0.00 36.67 5.52
631 632 2.159379 GGAGCAATCTTTACAAAGGCGG 60.159 50.000 2.04 0.00 36.67 6.13
632 633 1.818674 AGCAATCTTTACAAAGGCGGG 59.181 47.619 2.04 0.00 36.67 6.13
633 634 1.735700 GCAATCTTTACAAAGGCGGGC 60.736 52.381 2.04 0.00 36.67 6.13
634 635 1.543802 CAATCTTTACAAAGGCGGGCA 59.456 47.619 3.78 0.00 36.67 5.36
635 636 1.917872 ATCTTTACAAAGGCGGGCAA 58.082 45.000 3.78 0.00 36.67 4.52
636 637 0.955905 TCTTTACAAAGGCGGGCAAC 59.044 50.000 3.78 0.00 36.67 4.17
637 638 0.038618 CTTTACAAAGGCGGGCAACC 60.039 55.000 3.78 0.00 42.35 3.77
638 639 3.356983 CTTTACAAAGGCGGGCAACCC 62.357 57.143 3.78 0.00 42.62 4.11
655 656 4.826600 CTCTTTTGAGGCGCAACG 57.173 55.556 10.83 0.00 42.66 4.10
656 657 1.941812 CTCTTTTGAGGCGCAACGT 59.058 52.632 10.83 0.00 42.66 3.99
657 658 0.307760 CTCTTTTGAGGCGCAACGTT 59.692 50.000 10.83 0.00 42.66 3.99
658 659 1.529438 CTCTTTTGAGGCGCAACGTTA 59.471 47.619 10.83 0.00 42.66 3.18
659 660 1.941294 TCTTTTGAGGCGCAACGTTAA 59.059 42.857 10.83 0.00 35.91 2.01
660 661 2.355132 TCTTTTGAGGCGCAACGTTAAA 59.645 40.909 10.83 0.60 35.91 1.52
661 662 2.392933 TTTGAGGCGCAACGTTAAAG 57.607 45.000 10.83 0.00 35.91 1.85
662 663 0.589223 TTGAGGCGCAACGTTAAAGG 59.411 50.000 10.83 0.00 0.00 3.11
663 664 0.533308 TGAGGCGCAACGTTAAAGGT 60.533 50.000 10.83 0.00 0.00 3.50
664 665 0.110373 GAGGCGCAACGTTAAAGGTG 60.110 55.000 10.83 1.66 0.00 4.00
665 666 1.081708 GGCGCAACGTTAAAGGTGG 60.082 57.895 10.83 0.23 0.00 4.61
666 667 1.650363 GCGCAACGTTAAAGGTGGT 59.350 52.632 8.55 0.00 0.00 4.16
667 668 0.867086 GCGCAACGTTAAAGGTGGTA 59.133 50.000 8.55 0.00 0.00 3.25
668 669 1.398832 GCGCAACGTTAAAGGTGGTAC 60.399 52.381 8.55 0.00 0.00 3.34
669 670 1.865970 CGCAACGTTAAAGGTGGTACA 59.134 47.619 8.55 0.00 0.00 2.90
670 671 2.287373 CGCAACGTTAAAGGTGGTACAA 59.713 45.455 8.55 0.00 44.16 2.41
671 672 3.058777 CGCAACGTTAAAGGTGGTACAAT 60.059 43.478 8.55 0.00 44.16 2.71
672 673 4.152045 CGCAACGTTAAAGGTGGTACAATA 59.848 41.667 8.55 0.00 44.16 1.90
680 681 7.814107 CGTTAAAGGTGGTACAATAGAGTTGTA 59.186 37.037 0.00 0.00 44.16 2.41
689 690 3.947834 ACAATAGAGTTGTAAGGCCATGC 59.052 43.478 5.01 0.00 0.00 4.06
692 693 1.630369 AGAGTTGTAAGGCCATGCTCA 59.370 47.619 5.01 0.00 0.00 4.26
693 694 2.040278 AGAGTTGTAAGGCCATGCTCAA 59.960 45.455 5.01 0.00 0.00 3.02
695 696 3.434309 AGTTGTAAGGCCATGCTCAAAT 58.566 40.909 5.01 0.00 0.00 2.32
697 698 3.872511 TGTAAGGCCATGCTCAAATTG 57.127 42.857 5.01 0.00 0.00 2.32
698 699 2.094078 TGTAAGGCCATGCTCAAATTGC 60.094 45.455 5.01 0.00 0.00 3.56
699 700 0.108520 AAGGCCATGCTCAAATTGCG 60.109 50.000 5.01 0.00 0.00 4.85
700 701 2.169146 GGCCATGCTCAAATTGCGC 61.169 57.895 0.00 0.00 0.00 6.09
701 702 2.510594 GCCATGCTCAAATTGCGCG 61.511 57.895 0.00 0.00 29.18 6.86
702 703 1.874915 CCATGCTCAAATTGCGCGG 60.875 57.895 8.83 0.00 29.18 6.46
703 704 1.153978 CATGCTCAAATTGCGCGGT 60.154 52.632 8.83 0.00 29.18 5.68
704 705 0.733566 CATGCTCAAATTGCGCGGTT 60.734 50.000 8.83 0.00 29.18 4.44
705 706 0.733566 ATGCTCAAATTGCGCGGTTG 60.734 50.000 8.83 7.06 29.18 3.77
706 707 1.371635 GCTCAAATTGCGCGGTTGT 60.372 52.632 8.83 0.00 0.00 3.32
715 735 2.972505 CGCGGTTGTGCTTGGAGT 60.973 61.111 0.00 0.00 0.00 3.85
759 779 4.456280 CCAAAAAGGCCTATCTTGGTTC 57.544 45.455 23.39 0.00 33.34 3.62
762 782 1.286248 AAGGCCTATCTTGGTTCCGT 58.714 50.000 5.16 0.00 0.00 4.69
766 786 1.209747 GCCTATCTTGGTTCCGTCCTT 59.790 52.381 0.00 0.00 0.00 3.36
774 794 3.053831 TGGTTCCGTCCTTGATCTTTC 57.946 47.619 0.00 0.00 0.00 2.62
776 796 2.000447 GTTCCGTCCTTGATCTTTCCG 59.000 52.381 0.00 0.00 0.00 4.30
784 804 3.072476 TCCTTGATCTTTCCGTGAAAGGT 59.928 43.478 19.63 15.55 44.45 3.50
787 807 2.955614 GATCTTTCCGTGAAAGGTCGA 58.044 47.619 17.94 6.33 45.62 4.20
788 808 2.144482 TCTTTCCGTGAAAGGTCGAC 57.856 50.000 19.63 7.13 46.15 4.20
789 809 1.409790 TCTTTCCGTGAAAGGTCGACA 59.590 47.619 18.91 0.00 46.15 4.35
790 810 2.036733 TCTTTCCGTGAAAGGTCGACAT 59.963 45.455 18.91 7.60 46.15 3.06
792 812 2.536761 TCCGTGAAAGGTCGACATTT 57.463 45.000 26.47 26.47 32.05 2.32
793 813 2.841215 TCCGTGAAAGGTCGACATTTT 58.159 42.857 26.79 20.39 29.27 1.82
794 814 2.803956 TCCGTGAAAGGTCGACATTTTC 59.196 45.455 26.79 26.12 29.27 2.29
795 815 2.806244 CCGTGAAAGGTCGACATTTTCT 59.194 45.455 26.79 7.49 33.21 2.52
796 816 3.250040 CCGTGAAAGGTCGACATTTTCTT 59.750 43.478 26.79 13.13 33.21 2.52
797 817 4.261031 CCGTGAAAGGTCGACATTTTCTTT 60.261 41.667 26.79 20.04 33.21 2.52
798 818 4.904154 CGTGAAAGGTCGACATTTTCTTTC 59.096 41.667 26.79 25.77 41.89 2.62
799 819 5.503357 CGTGAAAGGTCGACATTTTCTTTCA 60.503 40.000 28.11 28.11 45.97 2.69
801 821 7.737972 TGAAAGGTCGACATTTTCTTTCATA 57.262 32.000 28.11 15.93 44.43 2.15
802 822 8.335532 TGAAAGGTCGACATTTTCTTTCATAT 57.664 30.769 28.11 8.86 44.43 1.78
804 824 9.704098 GAAAGGTCGACATTTTCTTTCATATAC 57.296 33.333 26.79 8.02 41.45 1.47
806 826 8.786826 AGGTCGACATTTTCTTTCATATACAA 57.213 30.769 18.91 0.00 0.00 2.41
807 827 9.396022 AGGTCGACATTTTCTTTCATATACAAT 57.604 29.630 18.91 0.00 0.00 2.71
811 858 9.288124 CGACATTTTCTTTCATATACAATGCAA 57.712 29.630 0.00 0.00 0.00 4.08
828 875 1.269831 GCAATTGTGGTTTTACCCGCA 60.270 47.619 7.40 0.00 43.07 5.69
834 881 3.488363 TGTGGTTTTACCCGCAGTATTT 58.512 40.909 0.00 0.00 40.01 1.40
845 892 2.432444 CGCAGTATTTTTCTCCACCCA 58.568 47.619 0.00 0.00 0.00 4.51
847 894 3.181497 CGCAGTATTTTTCTCCACCCATG 60.181 47.826 0.00 0.00 0.00 3.66
850 897 5.450965 GCAGTATTTTTCTCCACCCATGATG 60.451 44.000 0.00 0.00 0.00 3.07
921 2706 0.746563 TTCATTCCCGTTGCGATCCC 60.747 55.000 0.00 0.00 0.00 3.85
941 2726 2.782615 CGGAAAAACGGCCGCTAG 59.217 61.111 28.58 5.97 41.17 3.42
942 2727 1.738830 CGGAAAAACGGCCGCTAGA 60.739 57.895 28.58 0.00 41.17 2.43
1122 2931 2.647949 CCAGGTACCCCTCCCCTCT 61.648 68.421 8.74 0.00 39.89 3.69
1124 2933 2.286213 GGTACCCCTCCCCTCTCC 59.714 72.222 0.00 0.00 0.00 3.71
1128 2937 2.541709 TACCCCTCCCCTCTCCTCCT 62.542 65.000 0.00 0.00 0.00 3.69
1129 2938 2.652113 CCCCTCCCCTCTCCTCCTT 61.652 68.421 0.00 0.00 0.00 3.36
1135 2944 0.691413 CCCCTCTCCTCCTTACCACC 60.691 65.000 0.00 0.00 0.00 4.61
1145 2954 2.038654 TTACCACCCACCCACCCA 60.039 61.111 0.00 0.00 0.00 4.51
1149 2958 3.498071 CACCCACCCACCCACACT 61.498 66.667 0.00 0.00 0.00 3.55
1151 2960 3.966543 CCCACCCACCCACACTCC 61.967 72.222 0.00 0.00 0.00 3.85
1152 2961 4.329545 CCACCCACCCACACTCCG 62.330 72.222 0.00 0.00 0.00 4.63
1156 2965 3.941188 CCACCCACACTCCGCACT 61.941 66.667 0.00 0.00 0.00 4.40
1157 2966 2.357517 CACCCACACTCCGCACTC 60.358 66.667 0.00 0.00 0.00 3.51
1159 2968 3.625897 CCCACACTCCGCACTCCA 61.626 66.667 0.00 0.00 0.00 3.86
1161 2970 2.421314 CACACTCCGCACTCCACA 59.579 61.111 0.00 0.00 0.00 4.17
1164 2978 3.626924 ACTCCGCACTCCACACCC 61.627 66.667 0.00 0.00 0.00 4.61
1242 3056 2.000164 GGGTTCTTTCCCTCCTCCC 59.000 63.158 0.00 0.00 43.85 4.30
1243 3057 0.550393 GGGTTCTTTCCCTCCTCCCT 60.550 60.000 0.00 0.00 43.85 4.20
1244 3058 0.913205 GGTTCTTTCCCTCCTCCCTC 59.087 60.000 0.00 0.00 0.00 4.30
1248 3062 0.692756 CTTTCCCTCCTCCCTCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
1265 3079 3.827898 CCCTCGCTCCTGACCGTC 61.828 72.222 0.00 0.00 0.00 4.79
1398 3229 2.174969 CCCGCGCCGTGCTTAATAA 61.175 57.895 0.00 0.00 43.27 1.40
1399 3230 1.707239 CCCGCGCCGTGCTTAATAAA 61.707 55.000 0.00 0.00 43.27 1.40
1400 3231 0.306533 CCGCGCCGTGCTTAATAAAT 59.693 50.000 0.00 0.00 43.27 1.40
1401 3232 1.527736 CCGCGCCGTGCTTAATAAATA 59.472 47.619 0.00 0.00 43.27 1.40
1402 3233 2.411031 CCGCGCCGTGCTTAATAAATAG 60.411 50.000 0.00 0.00 43.27 1.73
1403 3234 2.473609 CGCGCCGTGCTTAATAAATAGA 59.526 45.455 0.00 0.00 43.27 1.98
1404 3235 3.660904 CGCGCCGTGCTTAATAAATAGAC 60.661 47.826 0.00 0.00 43.27 2.59
1405 3236 3.660904 GCGCCGTGCTTAATAAATAGACG 60.661 47.826 0.00 0.00 41.73 4.18
1412 3243 7.358187 CCGTGCTTAATAAATAGACGCTCTAAC 60.358 40.741 0.00 0.00 31.96 2.34
1425 3256 0.524392 CTCTAACTCTGACGCTGCCG 60.524 60.000 0.00 0.00 41.14 5.69
1437 3268 4.776322 CTGCCGTGAATCCCCGCA 62.776 66.667 0.00 0.00 0.00 5.69
1502 3333 2.747855 CAGGTTCTGCCCCGCTTC 60.748 66.667 0.00 0.00 38.26 3.86
1503 3334 4.035102 AGGTTCTGCCCCGCTTCC 62.035 66.667 0.00 0.00 38.26 3.46
1509 3340 4.344865 TGCCCCGCTTCCACTTCC 62.345 66.667 0.00 0.00 0.00 3.46
1522 3356 0.394899 CACTTCCCAGCCCAGGAATC 60.395 60.000 0.55 0.00 42.44 2.52
1528 3362 0.106819 CCAGCCCAGGAATCTTGGAG 60.107 60.000 13.40 4.40 0.00 3.86
1534 3368 1.078143 AGGAATCTTGGAGCCGTGC 60.078 57.895 0.00 0.00 0.00 5.34
1548 3382 1.439201 CGTGCGTGTGATTGTGCAG 60.439 57.895 0.00 0.00 38.14 4.41
1579 3413 0.809636 GTGGGGTTGTGTTTGCTTGC 60.810 55.000 0.00 0.00 0.00 4.01
1608 3442 2.484264 GTGGAGGATTTCAACAAGACCG 59.516 50.000 0.00 0.00 29.42 4.79
1619 3453 2.084681 CAAGACCGTCGCGTACACC 61.085 63.158 5.77 0.00 0.00 4.16
1746 3580 5.079406 CCGAAATTGTATGTCGTGAACAAG 58.921 41.667 0.00 0.00 42.37 3.16
1763 3597 1.577328 AAGCATGTTCCGCCGTCAAG 61.577 55.000 0.00 0.00 0.00 3.02
1765 3599 1.970917 GCATGTTCCGCCGTCAAGAG 61.971 60.000 0.00 0.00 0.00 2.85
1768 3602 0.319555 TGTTCCGCCGTCAAGAGAAG 60.320 55.000 0.00 0.00 0.00 2.85
1772 3606 1.493311 CGCCGTCAAGAGAAGTTGC 59.507 57.895 0.00 0.00 0.00 4.17
1780 3614 4.496895 CGTCAAGAGAAGTTGCAAAAACTG 59.503 41.667 0.00 0.00 0.00 3.16
1781 3615 5.640732 GTCAAGAGAAGTTGCAAAAACTGA 58.359 37.500 0.00 0.00 0.00 3.41
1788 3622 7.922811 AGAGAAGTTGCAAAAACTGATTTTAGG 59.077 33.333 0.00 0.00 39.20 2.69
1796 3630 8.470805 TGCAAAAACTGATTTTAGGTTCTAACA 58.529 29.630 0.00 0.00 39.20 2.41
1839 3673 0.384309 TATGGTAGCAAGAGACCGCG 59.616 55.000 0.00 0.00 38.69 6.46
1860 3694 2.359230 GAGCAGCCACTGGACACC 60.359 66.667 0.00 0.00 31.21 4.16
1869 3703 0.174389 CACTGGACACCGGATCAGAG 59.826 60.000 9.46 7.74 33.36 3.35
1898 3732 1.748493 TCTTTCAAGTGCAGCGGTTTT 59.252 42.857 0.00 0.00 0.00 2.43
1903 3737 2.354074 AAGTGCAGCGGTTTTGGCAG 62.354 55.000 0.00 0.00 36.86 4.85
1949 3784 2.376808 AAGCGAGAGGTCAGACATTG 57.623 50.000 2.17 0.00 43.76 2.82
1987 3822 8.055279 AGTTGTTTTGTAAGATGGTGGATATG 57.945 34.615 0.00 0.00 0.00 1.78
1989 3824 5.948758 TGTTTTGTAAGATGGTGGATATGCA 59.051 36.000 0.00 0.00 0.00 3.96
2033 3973 6.040504 GTGTTTCTGGTTCACTCCCTAAATTT 59.959 38.462 0.00 0.00 0.00 1.82
2036 3976 6.200878 TCTGGTTCACTCCCTAAATTTTCT 57.799 37.500 0.00 0.00 0.00 2.52
2059 3999 2.611292 GCTCTTATTCATTGCTGTCGCT 59.389 45.455 0.00 0.00 36.97 4.93
2196 4136 2.221981 CACAAACAGCTCGAGGAACTTC 59.778 50.000 15.58 0.00 41.55 3.01
2279 4219 0.684535 TCCACGGTGAAGCTCATGAA 59.315 50.000 10.28 0.00 0.00 2.57
2280 4220 0.798776 CCACGGTGAAGCTCATGAAC 59.201 55.000 10.28 0.00 0.00 3.18
2298 4238 6.595326 TCATGAACGATCAGATAATAATGGCC 59.405 38.462 0.00 0.00 39.39 5.36
2388 4328 6.020041 GCATAAAAGAAAGCAAAGCAGCTATC 60.020 38.462 0.00 0.00 45.89 2.08
2397 4337 2.359230 GCAGCTATCGGGGATGCC 60.359 66.667 0.00 0.00 39.77 4.40
2398 4338 3.150949 CAGCTATCGGGGATGCCA 58.849 61.111 5.30 0.00 0.00 4.92
2492 4503 3.914356 TTGTTCGCATTGGCATGGAACA 61.914 45.455 14.85 14.85 42.58 3.18
2601 4617 5.985530 TGTTCTGTACAACTCTGATGAAGTG 59.014 40.000 0.00 0.00 32.64 3.16
2604 4620 4.546570 TGTACAACTCTGATGAAGTGTCG 58.453 43.478 0.00 0.00 31.39 4.35
2613 4629 6.375736 ACTCTGATGAAGTGTCGAGAAGATTA 59.624 38.462 0.00 0.00 0.00 1.75
2775 4791 4.184629 GTGATGGTGTGATCAAGGAGTAC 58.815 47.826 0.00 0.00 34.11 2.73
3078 5149 0.878416 TGGTTATGCGGCAACTTGAC 59.122 50.000 6.82 0.00 0.00 3.18
3234 5305 3.350833 ACATCCCAAGCTTGACAAGATC 58.649 45.455 28.05 2.04 0.00 2.75
3455 5526 2.104792 TGTTTGACCTGAAGGAGTGGAG 59.895 50.000 2.62 0.00 38.94 3.86
3513 5584 5.288472 GCAAAATTTGGTAAGTAATGGAGCG 59.712 40.000 7.89 0.00 0.00 5.03
3567 5638 3.254470 TCCCACCGTGTATGTTATGTG 57.746 47.619 0.00 0.00 0.00 3.21
3572 5643 4.168014 CACCGTGTATGTTATGTGTACGT 58.832 43.478 0.00 0.00 0.00 3.57
3573 5644 4.263677 CACCGTGTATGTTATGTGTACGTC 59.736 45.833 0.00 0.00 0.00 4.34
3577 5648 4.496895 GTGTATGTTATGTGTACGTCGTCC 59.503 45.833 0.00 0.00 0.00 4.79
3602 5673 5.404366 TCTTACAACAATCGCTTGTCAGTAC 59.596 40.000 4.93 0.00 44.83 2.73
3603 5674 3.728845 ACAACAATCGCTTGTCAGTACT 58.271 40.909 4.93 0.00 44.83 2.73
3604 5675 3.741344 ACAACAATCGCTTGTCAGTACTC 59.259 43.478 4.93 0.00 44.83 2.59
3605 5676 2.960819 ACAATCGCTTGTCAGTACTCC 58.039 47.619 0.00 0.00 41.86 3.85
3606 5677 2.271800 CAATCGCTTGTCAGTACTCCC 58.728 52.381 0.00 0.00 0.00 4.30
3607 5678 1.853963 ATCGCTTGTCAGTACTCCCT 58.146 50.000 0.00 0.00 0.00 4.20
3608 5679 1.174783 TCGCTTGTCAGTACTCCCTC 58.825 55.000 0.00 0.00 0.00 4.30
3609 5680 0.173708 CGCTTGTCAGTACTCCCTCC 59.826 60.000 0.00 0.00 0.00 4.30
3610 5681 0.173708 GCTTGTCAGTACTCCCTCCG 59.826 60.000 0.00 0.00 0.00 4.63
3611 5682 1.835494 CTTGTCAGTACTCCCTCCGA 58.165 55.000 0.00 0.00 0.00 4.55
3612 5683 1.473278 CTTGTCAGTACTCCCTCCGAC 59.527 57.143 0.00 0.00 0.00 4.79
3613 5684 0.323178 TGTCAGTACTCCCTCCGACC 60.323 60.000 0.00 0.00 0.00 4.79
3614 5685 1.036481 GTCAGTACTCCCTCCGACCC 61.036 65.000 0.00 0.00 0.00 4.46
3615 5686 1.000019 CAGTACTCCCTCCGACCCA 60.000 63.158 0.00 0.00 0.00 4.51
3616 5687 0.613853 CAGTACTCCCTCCGACCCAA 60.614 60.000 0.00 0.00 0.00 4.12
3617 5688 0.115745 AGTACTCCCTCCGACCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3618 5689 0.978907 GTACTCCCTCCGACCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3619 5690 1.558294 GTACTCCCTCCGACCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3620 5691 1.961133 ACTCCCTCCGACCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3621 5692 2.271777 ACTCCCTCCGACCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3622 5693 2.238898 ACTCCCTCCGACCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3623 5694 1.562475 TCCCTCCGACCCAAAATAAGG 59.438 52.381 0.00 0.00 0.00 2.69
3624 5695 1.283905 CCCTCCGACCCAAAATAAGGT 59.716 52.381 0.00 0.00 39.75 3.50
3625 5696 2.291346 CCCTCCGACCCAAAATAAGGTT 60.291 50.000 0.00 0.00 36.17 3.50
3626 5697 3.427573 CCTCCGACCCAAAATAAGGTTT 58.572 45.455 0.00 0.00 36.17 3.27
3627 5698 3.830178 CCTCCGACCCAAAATAAGGTTTT 59.170 43.478 0.00 0.00 36.17 2.43
3628 5699 5.011586 CCTCCGACCCAAAATAAGGTTTTA 58.988 41.667 0.00 0.00 36.17 1.52
3629 5700 5.477637 CCTCCGACCCAAAATAAGGTTTTAA 59.522 40.000 0.00 0.00 36.17 1.52
3630 5701 6.015265 CCTCCGACCCAAAATAAGGTTTTAAA 60.015 38.462 0.00 0.00 36.17 1.52
3631 5702 6.747125 TCCGACCCAAAATAAGGTTTTAAAC 58.253 36.000 0.00 0.00 36.17 2.01
3647 5718 7.902032 GGTTTTAAACCTTAGTTCAAAACTGC 58.098 34.615 18.69 0.14 46.63 4.40
3648 5719 7.546316 GGTTTTAAACCTTAGTTCAAAACTGCA 59.454 33.333 18.69 0.00 46.63 4.41
3649 5720 8.927721 GTTTTAAACCTTAGTTCAAAACTGCAA 58.072 29.630 9.25 0.00 45.10 4.08
3650 5721 8.468720 TTTAAACCTTAGTTCAAAACTGCAAC 57.531 30.769 2.65 0.00 42.84 4.17
3651 5722 5.652994 AACCTTAGTTCAAAACTGCAACA 57.347 34.783 2.65 0.00 42.84 3.33
3652 5723 4.993905 ACCTTAGTTCAAAACTGCAACAC 58.006 39.130 2.65 0.00 42.84 3.32
3653 5724 4.705023 ACCTTAGTTCAAAACTGCAACACT 59.295 37.500 2.65 0.00 42.84 3.55
3654 5725 5.185056 ACCTTAGTTCAAAACTGCAACACTT 59.815 36.000 2.65 0.00 42.84 3.16
3655 5726 6.376018 ACCTTAGTTCAAAACTGCAACACTTA 59.624 34.615 2.65 0.00 42.84 2.24
3656 5727 7.068226 ACCTTAGTTCAAAACTGCAACACTTAT 59.932 33.333 2.65 0.00 42.84 1.73
3657 5728 7.920682 CCTTAGTTCAAAACTGCAACACTTATT 59.079 33.333 2.65 0.00 42.84 1.40
3658 5729 9.944663 CTTAGTTCAAAACTGCAACACTTATTA 57.055 29.630 2.65 0.00 42.84 0.98
3660 5731 8.801715 AGTTCAAAACTGCAACACTTATTATG 57.198 30.769 0.00 0.00 41.01 1.90
3661 5732 7.867403 AGTTCAAAACTGCAACACTTATTATGG 59.133 33.333 0.00 0.00 41.01 2.74
3662 5733 6.686630 TCAAAACTGCAACACTTATTATGGG 58.313 36.000 0.00 0.00 0.00 4.00
3663 5734 6.266558 TCAAAACTGCAACACTTATTATGGGT 59.733 34.615 0.00 0.00 0.00 4.51
3664 5735 5.897377 AACTGCAACACTTATTATGGGTC 57.103 39.130 0.00 0.00 0.00 4.46
3665 5736 3.938963 ACTGCAACACTTATTATGGGTCG 59.061 43.478 0.00 0.00 0.00 4.79
3666 5737 3.275143 TGCAACACTTATTATGGGTCGG 58.725 45.455 0.00 0.00 0.00 4.79
3667 5738 3.055021 TGCAACACTTATTATGGGTCGGA 60.055 43.478 0.00 0.00 0.00 4.55
3668 5739 3.560068 GCAACACTTATTATGGGTCGGAG 59.440 47.826 0.00 0.00 0.00 4.63
3669 5740 4.127171 CAACACTTATTATGGGTCGGAGG 58.873 47.826 0.00 0.00 0.00 4.30
3670 5741 2.704065 ACACTTATTATGGGTCGGAGGG 59.296 50.000 0.00 0.00 0.00 4.30
3671 5742 2.969950 CACTTATTATGGGTCGGAGGGA 59.030 50.000 0.00 0.00 0.00 4.20
3672 5743 3.006967 CACTTATTATGGGTCGGAGGGAG 59.993 52.174 0.00 0.00 0.00 4.30
3673 5744 3.240302 CTTATTATGGGTCGGAGGGAGT 58.760 50.000 0.00 0.00 0.00 3.85
3674 5745 4.140853 ACTTATTATGGGTCGGAGGGAGTA 60.141 45.833 0.00 0.00 0.00 2.59
3689 5760 5.715279 GGAGGGAGTAGCTTTTATTGGTTTT 59.285 40.000 0.00 0.00 0.00 2.43
3826 5898 0.034089 ATGTCTTGGGCCTTGGCTAC 60.034 55.000 11.71 5.85 0.00 3.58
3877 5949 2.295253 ATGCAGCGGTAGTTCACTAC 57.705 50.000 8.41 8.41 46.09 2.73
3969 6041 2.916640 TGTTGACAGCTCACACATTCA 58.083 42.857 0.00 0.00 0.00 2.57
3972 6044 0.441533 GACAGCTCACACATTCAGCG 59.558 55.000 0.00 0.00 38.26 5.18
4078 6150 7.663905 AGTTAGGTAGAGCAGTGATATGTCTAG 59.336 40.741 0.00 0.00 0.00 2.43
4103 6175 6.755141 GCATTGTTCAGCATCATAATCTTGTT 59.245 34.615 0.00 0.00 0.00 2.83
4159 6318 2.698803 ACTACATGCACAGCGATTTGA 58.301 42.857 0.00 0.00 0.00 2.69
4162 6321 3.581024 ACATGCACAGCGATTTGAAAT 57.419 38.095 0.00 0.00 0.00 2.17
4188 6347 9.890629 TTCACAGCATAGTAAATATTCTTCTGT 57.109 29.630 0.00 0.00 0.00 3.41
4197 6356 8.480643 AGTAAATATTCTTCTGTTCTCAACCG 57.519 34.615 0.00 0.00 0.00 4.44
4308 6473 0.313043 CTACACGTGGTCCAACGAGT 59.687 55.000 21.57 16.76 46.49 4.18
4420 6587 2.346803 CTCCGTTGTTTCCGATCACAT 58.653 47.619 0.00 0.00 0.00 3.21
4679 6846 0.178921 TCCTTCTCAGGCTGGACACT 60.179 55.000 15.73 0.00 40.58 3.55
4786 6953 4.457496 CACCATCGCCCGACAGCT 62.457 66.667 0.00 0.00 0.00 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.178758 GGGAGTAGATGATAGACAAATGTTTTT 57.821 33.333 0.00 0.00 0.00 1.94
5 6 8.552296 AGGGAGTAGATGATAGACAAATGTTTT 58.448 33.333 0.00 0.00 0.00 2.43
6 7 8.095452 AGGGAGTAGATGATAGACAAATGTTT 57.905 34.615 0.00 0.00 0.00 2.83
7 8 7.202047 GGAGGGAGTAGATGATAGACAAATGTT 60.202 40.741 0.00 0.00 0.00 2.71
8 9 6.268847 GGAGGGAGTAGATGATAGACAAATGT 59.731 42.308 0.00 0.00 0.00 2.71
9 10 6.571344 CGGAGGGAGTAGATGATAGACAAATG 60.571 46.154 0.00 0.00 0.00 2.32
10 11 5.478679 CGGAGGGAGTAGATGATAGACAAAT 59.521 44.000 0.00 0.00 0.00 2.32
11 12 4.827835 CGGAGGGAGTAGATGATAGACAAA 59.172 45.833 0.00 0.00 0.00 2.83
12 13 4.141228 ACGGAGGGAGTAGATGATAGACAA 60.141 45.833 0.00 0.00 0.00 3.18
13 14 3.394940 ACGGAGGGAGTAGATGATAGACA 59.605 47.826 0.00 0.00 0.00 3.41
14 15 4.004982 GACGGAGGGAGTAGATGATAGAC 58.995 52.174 0.00 0.00 0.00 2.59
15 16 3.009253 GGACGGAGGGAGTAGATGATAGA 59.991 52.174 0.00 0.00 0.00 1.98
16 17 3.349022 GGACGGAGGGAGTAGATGATAG 58.651 54.545 0.00 0.00 0.00 2.08
17 18 2.041350 GGGACGGAGGGAGTAGATGATA 59.959 54.545 0.00 0.00 0.00 2.15
18 19 1.203075 GGGACGGAGGGAGTAGATGAT 60.203 57.143 0.00 0.00 0.00 2.45
19 20 0.185416 GGGACGGAGGGAGTAGATGA 59.815 60.000 0.00 0.00 0.00 2.92
20 21 0.106167 TGGGACGGAGGGAGTAGATG 60.106 60.000 0.00 0.00 0.00 2.90
21 22 0.635009 TTGGGACGGAGGGAGTAGAT 59.365 55.000 0.00 0.00 0.00 1.98
22 23 0.410663 TTTGGGACGGAGGGAGTAGA 59.589 55.000 0.00 0.00 0.00 2.59
23 24 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
24 25 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
25 26 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
26 27 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
27 28 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
28 29 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
29 30 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
30 31 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
31 32 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
32 33 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
33 34 5.880054 ATTGAGTCACTTATTTTGGGACG 57.120 39.130 0.00 0.00 33.84 4.79
71 72 8.777865 TCTGTGTTTTATTAGAAGACAGGATG 57.222 34.615 18.36 1.60 44.18 3.51
74 75 9.877178 ACTATCTGTGTTTTATTAGAAGACAGG 57.123 33.333 18.36 9.41 44.18 4.00
92 93 3.952323 TCTACTTTAGCGGCACTATCTGT 59.048 43.478 1.45 0.00 0.00 3.41
93 94 4.569761 TCTACTTTAGCGGCACTATCTG 57.430 45.455 1.45 0.00 0.00 2.90
94 95 4.401519 TGTTCTACTTTAGCGGCACTATCT 59.598 41.667 1.45 0.00 0.00 1.98
95 96 4.503370 GTGTTCTACTTTAGCGGCACTATC 59.497 45.833 1.45 0.00 0.00 2.08
96 97 4.430908 GTGTTCTACTTTAGCGGCACTAT 58.569 43.478 1.45 0.00 0.00 2.12
97 98 3.671433 CGTGTTCTACTTTAGCGGCACTA 60.671 47.826 1.45 0.00 0.00 2.74
98 99 2.685100 GTGTTCTACTTTAGCGGCACT 58.315 47.619 1.45 0.00 0.00 4.40
99 100 1.389106 CGTGTTCTACTTTAGCGGCAC 59.611 52.381 1.45 0.00 0.00 5.01
100 101 1.270274 TCGTGTTCTACTTTAGCGGCA 59.730 47.619 1.45 0.00 0.00 5.69
101 102 1.986698 TCGTGTTCTACTTTAGCGGC 58.013 50.000 0.00 0.00 0.00 6.53
102 103 3.508762 ACATCGTGTTCTACTTTAGCGG 58.491 45.455 0.00 0.00 0.00 5.52
103 104 5.511088 AAACATCGTGTTCTACTTTAGCG 57.489 39.130 4.28 0.00 40.14 4.26
132 133 6.405538 AGTGTTCCTGCAAATTTCTTGAAAA 58.594 32.000 0.00 0.00 0.00 2.29
133 134 5.976458 AGTGTTCCTGCAAATTTCTTGAAA 58.024 33.333 0.00 0.00 0.00 2.69
134 135 5.360714 AGAGTGTTCCTGCAAATTTCTTGAA 59.639 36.000 0.00 0.00 0.00 2.69
135 136 4.889409 AGAGTGTTCCTGCAAATTTCTTGA 59.111 37.500 0.00 0.00 0.00 3.02
136 137 5.009410 AGAGAGTGTTCCTGCAAATTTCTTG 59.991 40.000 0.00 0.00 0.00 3.02
137 138 5.136105 AGAGAGTGTTCCTGCAAATTTCTT 58.864 37.500 0.00 0.00 0.00 2.52
138 139 4.723309 AGAGAGTGTTCCTGCAAATTTCT 58.277 39.130 0.00 0.00 0.00 2.52
139 140 5.444663 AAGAGAGTGTTCCTGCAAATTTC 57.555 39.130 0.00 0.00 0.00 2.17
140 141 5.859205 AAAGAGAGTGTTCCTGCAAATTT 57.141 34.783 0.00 0.00 0.00 1.82
141 142 5.859205 AAAAGAGAGTGTTCCTGCAAATT 57.141 34.783 0.00 0.00 0.00 1.82
142 143 6.064717 ACTAAAAGAGAGTGTTCCTGCAAAT 58.935 36.000 0.00 0.00 0.00 2.32
143 144 5.437060 ACTAAAAGAGAGTGTTCCTGCAAA 58.563 37.500 0.00 0.00 0.00 3.68
144 145 5.036117 ACTAAAAGAGAGTGTTCCTGCAA 57.964 39.130 0.00 0.00 0.00 4.08
145 146 4.689612 ACTAAAAGAGAGTGTTCCTGCA 57.310 40.909 0.00 0.00 0.00 4.41
146 147 5.639931 CCTAACTAAAAGAGAGTGTTCCTGC 59.360 44.000 0.00 0.00 0.00 4.85
147 148 6.994221 TCCTAACTAAAAGAGAGTGTTCCTG 58.006 40.000 0.00 0.00 0.00 3.86
148 149 7.613551 TTCCTAACTAAAAGAGAGTGTTCCT 57.386 36.000 0.00 0.00 0.00 3.36
149 150 7.713942 TGTTTCCTAACTAAAAGAGAGTGTTCC 59.286 37.037 0.00 0.00 35.24 3.62
150 151 8.658499 TGTTTCCTAACTAAAAGAGAGTGTTC 57.342 34.615 0.00 0.00 35.24 3.18
151 152 8.483758 TCTGTTTCCTAACTAAAAGAGAGTGTT 58.516 33.333 0.00 0.00 31.94 3.32
152 153 8.019656 TCTGTTTCCTAACTAAAAGAGAGTGT 57.980 34.615 0.00 0.00 31.94 3.55
153 154 8.527567 CTCTGTTTCCTAACTAAAAGAGAGTG 57.472 38.462 11.66 0.00 43.01 3.51
184 185 9.357161 ACCAAAAACAACCTCATAGTATGTAAA 57.643 29.630 9.94 0.00 0.00 2.01
185 186 8.788806 CACCAAAAACAACCTCATAGTATGTAA 58.211 33.333 9.94 0.00 0.00 2.41
186 187 8.158132 TCACCAAAAACAACCTCATAGTATGTA 58.842 33.333 9.94 0.00 0.00 2.29
187 188 7.001674 TCACCAAAAACAACCTCATAGTATGT 58.998 34.615 9.94 0.00 0.00 2.29
188 189 7.447374 TCACCAAAAACAACCTCATAGTATG 57.553 36.000 3.55 3.55 0.00 2.39
189 190 8.357402 GTTTCACCAAAAACAACCTCATAGTAT 58.643 33.333 0.00 0.00 38.68 2.12
190 191 7.339721 TGTTTCACCAAAAACAACCTCATAGTA 59.660 33.333 0.01 0.00 44.02 1.82
191 192 6.153680 TGTTTCACCAAAAACAACCTCATAGT 59.846 34.615 0.01 0.00 44.02 2.12
192 193 6.568869 TGTTTCACCAAAAACAACCTCATAG 58.431 36.000 0.01 0.00 44.02 2.23
193 194 6.531503 TGTTTCACCAAAAACAACCTCATA 57.468 33.333 0.01 0.00 44.02 2.15
194 195 5.413309 TGTTTCACCAAAAACAACCTCAT 57.587 34.783 0.01 0.00 44.02 2.90
195 196 4.873746 TGTTTCACCAAAAACAACCTCA 57.126 36.364 0.01 0.00 44.02 3.86
207 208 2.122167 GGGCGTGGTTGTTTCACCA 61.122 57.895 0.00 0.00 45.13 4.17
208 209 1.668101 TTGGGCGTGGTTGTTTCACC 61.668 55.000 0.00 0.00 37.34 4.02
209 210 0.173708 TTTGGGCGTGGTTGTTTCAC 59.826 50.000 0.00 0.00 0.00 3.18
210 211 1.115467 ATTTGGGCGTGGTTGTTTCA 58.885 45.000 0.00 0.00 0.00 2.69
211 212 1.496934 CATTTGGGCGTGGTTGTTTC 58.503 50.000 0.00 0.00 0.00 2.78
212 213 0.105778 CCATTTGGGCGTGGTTGTTT 59.894 50.000 0.00 0.00 0.00 2.83
213 214 1.745264 CCATTTGGGCGTGGTTGTT 59.255 52.632 0.00 0.00 0.00 2.83
214 215 3.453988 CCATTTGGGCGTGGTTGT 58.546 55.556 0.00 0.00 0.00 3.32
223 224 1.873591 GTATGTAGAGCGCCATTTGGG 59.126 52.381 2.29 0.00 40.85 4.12
224 225 2.802816 GAGTATGTAGAGCGCCATTTGG 59.197 50.000 2.29 0.00 38.53 3.28
225 226 3.722147 AGAGTATGTAGAGCGCCATTTG 58.278 45.455 2.29 0.00 0.00 2.32
226 227 5.069251 ACTTAGAGTATGTAGAGCGCCATTT 59.931 40.000 2.29 0.00 0.00 2.32
227 228 4.585162 ACTTAGAGTATGTAGAGCGCCATT 59.415 41.667 2.29 0.00 0.00 3.16
228 229 4.145807 ACTTAGAGTATGTAGAGCGCCAT 58.854 43.478 2.29 2.41 0.00 4.40
229 230 3.552875 ACTTAGAGTATGTAGAGCGCCA 58.447 45.455 2.29 0.00 0.00 5.69
230 231 5.686159 TTACTTAGAGTATGTAGAGCGCC 57.314 43.478 2.29 0.00 29.64 6.53
231 232 8.480853 CAAATTTACTTAGAGTATGTAGAGCGC 58.519 37.037 0.00 0.00 29.64 5.92
232 233 9.517609 ACAAATTTACTTAGAGTATGTAGAGCG 57.482 33.333 0.00 0.00 29.64 5.03
282 283 8.560124 AATCTATTTGGGGGTTGCAAAATATA 57.440 30.769 0.00 0.00 0.00 0.86
287 288 5.046231 GGTTAATCTATTTGGGGGTTGCAAA 60.046 40.000 0.00 0.00 0.00 3.68
290 291 3.386726 GGGTTAATCTATTTGGGGGTTGC 59.613 47.826 0.00 0.00 0.00 4.17
299 300 8.950007 TTCAACTTCCTTGGGTTAATCTATTT 57.050 30.769 0.00 0.00 0.00 1.40
318 319 2.089980 GGAGCATGCATGACTTCAACT 58.910 47.619 30.64 15.17 0.00 3.16
346 347 5.005682 CGTGTATGTCATGTTGAGTATGTGG 59.994 44.000 0.00 0.00 0.00 4.17
370 371 2.094545 GCATCCTTGGACCACAATCAAC 60.095 50.000 0.00 0.00 38.65 3.18
374 375 2.537633 ATGCATCCTTGGACCACAAT 57.462 45.000 0.00 0.00 38.65 2.71
425 426 2.264794 CCTCAACCCTCGTTCCCG 59.735 66.667 0.00 0.00 0.00 5.14
441 442 1.598685 TTTCGCGTGGAGTTTCCCC 60.599 57.895 5.77 0.00 35.03 4.81
456 457 5.278315 GGGATTGTTGTCAACTAGTGGTTTC 60.278 44.000 16.45 3.06 35.74 2.78
475 476 2.105134 TCACCGTACAAAGTGTGGGATT 59.895 45.455 7.36 0.00 35.45 3.01
478 479 1.956297 TTCACCGTACAAAGTGTGGG 58.044 50.000 7.36 0.00 35.45 4.61
501 502 3.609853 TGCTCGCCTTCATAAAGATTGT 58.390 40.909 0.00 0.00 34.14 2.71
528 529 8.989653 AACTTTATGTCTTTCCGTTTCAAAAA 57.010 26.923 0.00 0.00 0.00 1.94
534 535 4.521639 GGGGAACTTTATGTCTTTCCGTTT 59.478 41.667 0.00 0.00 38.78 3.60
536 537 3.560668 GGGGGAACTTTATGTCTTTCCGT 60.561 47.826 0.00 0.00 38.78 4.69
547 548 4.106663 TGCCTAAAAAGAGGGGGAACTTTA 59.893 41.667 0.00 0.00 37.06 1.85
550 551 2.041755 CTGCCTAAAAAGAGGGGGAACT 59.958 50.000 0.00 0.00 37.06 3.01
551 552 2.447443 CTGCCTAAAAAGAGGGGGAAC 58.553 52.381 0.00 0.00 37.06 3.62
552 553 1.357761 CCTGCCTAAAAAGAGGGGGAA 59.642 52.381 0.00 0.00 37.06 3.97
553 554 0.999712 CCTGCCTAAAAAGAGGGGGA 59.000 55.000 0.00 0.00 37.06 4.81
555 556 1.075536 ACACCTGCCTAAAAAGAGGGG 59.924 52.381 0.00 0.00 37.06 4.79
556 557 2.162681 CACACCTGCCTAAAAAGAGGG 58.837 52.381 0.00 0.00 37.06 4.30
557 558 2.162681 CCACACCTGCCTAAAAAGAGG 58.837 52.381 0.00 0.00 39.88 3.69
558 559 2.814336 GACCACACCTGCCTAAAAAGAG 59.186 50.000 0.00 0.00 0.00 2.85
559 560 2.173782 TGACCACACCTGCCTAAAAAGA 59.826 45.455 0.00 0.00 0.00 2.52
560 561 2.554032 CTGACCACACCTGCCTAAAAAG 59.446 50.000 0.00 0.00 0.00 2.27
561 562 2.582052 CTGACCACACCTGCCTAAAAA 58.418 47.619 0.00 0.00 0.00 1.94
562 563 1.817740 GCTGACCACACCTGCCTAAAA 60.818 52.381 0.00 0.00 0.00 1.52
563 564 0.250727 GCTGACCACACCTGCCTAAA 60.251 55.000 0.00 0.00 0.00 1.85
564 565 1.127567 AGCTGACCACACCTGCCTAA 61.128 55.000 0.00 0.00 0.00 2.69
565 566 1.536418 AGCTGACCACACCTGCCTA 60.536 57.895 0.00 0.00 0.00 3.93
566 567 2.851102 AGCTGACCACACCTGCCT 60.851 61.111 0.00 0.00 0.00 4.75
567 568 2.670934 CAGCTGACCACACCTGCC 60.671 66.667 8.42 0.00 0.00 4.85
568 569 0.250295 TAACAGCTGACCACACCTGC 60.250 55.000 23.35 0.00 34.22 4.85
569 570 1.202639 TGTAACAGCTGACCACACCTG 60.203 52.381 23.35 0.00 36.23 4.00
570 571 1.128200 TGTAACAGCTGACCACACCT 58.872 50.000 23.35 0.00 0.00 4.00
571 572 1.961793 TTGTAACAGCTGACCACACC 58.038 50.000 23.35 1.17 0.00 4.16
572 573 2.943033 AGTTTGTAACAGCTGACCACAC 59.057 45.455 23.35 15.37 0.00 3.82
573 574 3.275617 AGTTTGTAACAGCTGACCACA 57.724 42.857 23.35 17.12 0.00 4.17
574 575 5.744666 TTTAGTTTGTAACAGCTGACCAC 57.255 39.130 23.35 14.69 0.00 4.16
575 576 6.544197 TCATTTTAGTTTGTAACAGCTGACCA 59.456 34.615 23.35 10.62 0.00 4.02
576 577 6.966021 TCATTTTAGTTTGTAACAGCTGACC 58.034 36.000 23.35 7.90 0.00 4.02
605 606 5.991606 GCCTTTGTAAAGATTGCTCCTTTTT 59.008 36.000 5.95 0.00 38.28 1.94
606 607 5.541845 GCCTTTGTAAAGATTGCTCCTTTT 58.458 37.500 5.95 0.00 38.28 2.27
607 608 4.321230 CGCCTTTGTAAAGATTGCTCCTTT 60.321 41.667 5.95 0.00 38.28 3.11
608 609 3.191371 CGCCTTTGTAAAGATTGCTCCTT 59.809 43.478 5.95 0.00 38.28 3.36
609 610 2.749621 CGCCTTTGTAAAGATTGCTCCT 59.250 45.455 5.95 0.00 38.28 3.69
610 611 2.159379 CCGCCTTTGTAAAGATTGCTCC 60.159 50.000 5.95 0.00 38.28 4.70
611 612 2.159379 CCCGCCTTTGTAAAGATTGCTC 60.159 50.000 5.95 0.00 38.28 4.26
612 613 1.818674 CCCGCCTTTGTAAAGATTGCT 59.181 47.619 5.95 0.00 38.28 3.91
613 614 1.735700 GCCCGCCTTTGTAAAGATTGC 60.736 52.381 5.95 0.89 38.28 3.56
614 615 1.543802 TGCCCGCCTTTGTAAAGATTG 59.456 47.619 5.95 0.00 38.28 2.67
615 616 1.917872 TGCCCGCCTTTGTAAAGATT 58.082 45.000 5.95 0.00 38.28 2.40
616 617 1.544246 GTTGCCCGCCTTTGTAAAGAT 59.456 47.619 5.95 0.00 38.28 2.40
617 618 0.955905 GTTGCCCGCCTTTGTAAAGA 59.044 50.000 5.95 0.00 38.28 2.52
618 619 0.038618 GGTTGCCCGCCTTTGTAAAG 60.039 55.000 0.00 0.00 35.79 1.85
619 620 1.465200 GGGTTGCCCGCCTTTGTAAA 61.465 55.000 0.00 0.00 32.13 2.01
620 621 1.904378 GGGTTGCCCGCCTTTGTAA 60.904 57.895 0.00 0.00 32.13 2.41
621 622 2.282603 GGGTTGCCCGCCTTTGTA 60.283 61.111 0.00 0.00 32.13 2.41
630 631 1.536073 GCCTCAAAAGAGGGTTGCCC 61.536 60.000 13.01 0.00 45.90 5.36
631 632 1.866853 CGCCTCAAAAGAGGGTTGCC 61.867 60.000 13.01 0.00 42.50 4.52
632 633 1.581447 CGCCTCAAAAGAGGGTTGC 59.419 57.895 13.01 0.00 42.50 4.17
633 634 1.172180 TGCGCCTCAAAAGAGGGTTG 61.172 55.000 4.18 0.00 42.50 3.77
634 635 0.467290 TTGCGCCTCAAAAGAGGGTT 60.467 50.000 4.18 0.00 42.50 4.11
635 636 1.150536 TTGCGCCTCAAAAGAGGGT 59.849 52.632 4.18 0.00 42.50 4.34
636 637 1.581447 GTTGCGCCTCAAAAGAGGG 59.419 57.895 4.18 4.97 42.50 4.30
637 638 1.207593 CGTTGCGCCTCAAAAGAGG 59.792 57.895 4.18 7.16 44.98 3.69
638 639 0.307760 AACGTTGCGCCTCAAAAGAG 59.692 50.000 4.18 0.00 36.26 2.85
639 640 1.584175 TAACGTTGCGCCTCAAAAGA 58.416 45.000 11.99 0.00 36.26 2.52
640 641 2.392933 TTAACGTTGCGCCTCAAAAG 57.607 45.000 11.99 0.00 36.26 2.27
641 642 2.541999 CCTTTAACGTTGCGCCTCAAAA 60.542 45.455 11.99 0.00 36.26 2.44
642 643 1.002251 CCTTTAACGTTGCGCCTCAAA 60.002 47.619 11.99 0.32 36.26 2.69
643 644 0.589223 CCTTTAACGTTGCGCCTCAA 59.411 50.000 11.99 0.00 0.00 3.02
644 645 0.533308 ACCTTTAACGTTGCGCCTCA 60.533 50.000 11.99 0.00 0.00 3.86
645 646 0.110373 CACCTTTAACGTTGCGCCTC 60.110 55.000 11.99 0.00 0.00 4.70
646 647 1.512156 CCACCTTTAACGTTGCGCCT 61.512 55.000 11.99 0.00 0.00 5.52
647 648 1.081708 CCACCTTTAACGTTGCGCC 60.082 57.895 11.99 0.00 0.00 6.53
648 649 0.867086 TACCACCTTTAACGTTGCGC 59.133 50.000 11.99 0.00 0.00 6.09
649 650 1.865970 TGTACCACCTTTAACGTTGCG 59.134 47.619 11.99 0.00 0.00 4.85
650 651 3.967203 TTGTACCACCTTTAACGTTGC 57.033 42.857 11.99 0.00 0.00 4.17
651 652 6.647895 ACTCTATTGTACCACCTTTAACGTTG 59.352 38.462 11.99 0.00 0.00 4.10
652 653 6.762333 ACTCTATTGTACCACCTTTAACGTT 58.238 36.000 5.88 5.88 0.00 3.99
653 654 6.350629 ACTCTATTGTACCACCTTTAACGT 57.649 37.500 0.00 0.00 0.00 3.99
654 655 6.647895 ACAACTCTATTGTACCACCTTTAACG 59.352 38.462 0.00 0.00 0.00 3.18
655 656 7.974482 ACAACTCTATTGTACCACCTTTAAC 57.026 36.000 0.00 0.00 0.00 2.01
656 657 9.715121 CTTACAACTCTATTGTACCACCTTTAA 57.285 33.333 0.00 0.00 34.93 1.52
657 658 8.316214 CCTTACAACTCTATTGTACCACCTTTA 58.684 37.037 0.00 0.00 34.93 1.85
658 659 7.166167 CCTTACAACTCTATTGTACCACCTTT 58.834 38.462 0.00 0.00 34.93 3.11
659 660 6.708285 CCTTACAACTCTATTGTACCACCTT 58.292 40.000 0.00 0.00 34.93 3.50
660 661 5.338137 GCCTTACAACTCTATTGTACCACCT 60.338 44.000 0.00 0.00 34.93 4.00
661 662 4.874396 GCCTTACAACTCTATTGTACCACC 59.126 45.833 0.00 0.00 34.93 4.61
662 663 4.874396 GGCCTTACAACTCTATTGTACCAC 59.126 45.833 0.00 0.00 34.93 4.16
663 664 4.532916 TGGCCTTACAACTCTATTGTACCA 59.467 41.667 3.32 2.17 34.93 3.25
664 665 5.093849 TGGCCTTACAACTCTATTGTACC 57.906 43.478 3.32 0.00 34.93 3.34
665 666 5.007724 GCATGGCCTTACAACTCTATTGTAC 59.992 44.000 3.32 0.00 34.93 2.90
666 667 5.104527 AGCATGGCCTTACAACTCTATTGTA 60.105 40.000 3.32 0.00 34.11 2.41
667 668 3.947834 GCATGGCCTTACAACTCTATTGT 59.052 43.478 3.32 0.00 36.49 2.71
668 669 4.202441 AGCATGGCCTTACAACTCTATTG 58.798 43.478 3.32 0.00 0.00 1.90
669 670 4.080356 TGAGCATGGCCTTACAACTCTATT 60.080 41.667 3.32 0.00 32.15 1.73
670 671 3.455910 TGAGCATGGCCTTACAACTCTAT 59.544 43.478 3.32 0.00 32.15 1.98
671 672 2.837591 TGAGCATGGCCTTACAACTCTA 59.162 45.455 3.32 0.00 32.15 2.43
672 673 1.630369 TGAGCATGGCCTTACAACTCT 59.370 47.619 3.32 0.00 32.15 3.24
680 681 0.108520 CGCAATTTGAGCATGGCCTT 60.109 50.000 3.32 0.00 0.00 4.35
689 690 1.608093 GCACAACCGCGCAATTTGAG 61.608 55.000 16.90 11.27 0.00 3.02
692 693 1.067250 AAGCACAACCGCGCAATTT 59.933 47.368 8.75 0.00 36.85 1.82
693 694 1.661197 CAAGCACAACCGCGCAATT 60.661 52.632 8.75 0.00 36.85 2.32
695 696 4.263209 CCAAGCACAACCGCGCAA 62.263 61.111 8.75 0.00 36.85 4.85
697 698 4.389576 CTCCAAGCACAACCGCGC 62.390 66.667 0.00 0.00 36.85 6.86
698 699 2.972505 ACTCCAAGCACAACCGCG 60.973 61.111 0.00 0.00 36.85 6.46
699 700 2.186826 ACACTCCAAGCACAACCGC 61.187 57.895 0.00 0.00 0.00 5.68
700 701 1.648720 CACACTCCAAGCACAACCG 59.351 57.895 0.00 0.00 0.00 4.44
701 702 1.360192 GCACACTCCAAGCACAACC 59.640 57.895 0.00 0.00 0.00 3.77
702 703 1.360192 GGCACACTCCAAGCACAAC 59.640 57.895 0.00 0.00 0.00 3.32
703 704 1.827789 GGGCACACTCCAAGCACAA 60.828 57.895 0.00 0.00 0.00 3.33
704 705 2.203337 GGGCACACTCCAAGCACA 60.203 61.111 0.00 0.00 0.00 4.57
705 706 1.968540 GAGGGCACACTCCAAGCAC 60.969 63.158 0.00 0.00 0.00 4.40
706 707 2.431683 GAGGGCACACTCCAAGCA 59.568 61.111 0.00 0.00 0.00 3.91
713 733 3.971702 GGGCTTGGAGGGCACACT 61.972 66.667 0.00 0.00 32.68 3.55
759 779 1.067142 TCACGGAAAGATCAAGGACGG 60.067 52.381 0.00 0.00 0.00 4.79
774 794 2.806244 AGAAAATGTCGACCTTTCACGG 59.194 45.455 28.10 0.00 32.59 4.94
776 796 5.816919 TGAAAGAAAATGTCGACCTTTCAC 58.183 37.500 28.11 20.28 44.19 3.18
784 804 8.672815 TGCATTGTATATGAAAGAAAATGTCGA 58.327 29.630 0.00 0.00 0.00 4.20
804 824 3.431572 CGGGTAAAACCACAATTGCATTG 59.568 43.478 5.05 7.16 41.02 2.82
806 826 2.611722 GCGGGTAAAACCACAATTGCAT 60.612 45.455 5.05 0.00 41.02 3.96
807 827 1.269831 GCGGGTAAAACCACAATTGCA 60.270 47.619 5.05 0.00 41.02 4.08
811 858 1.989706 ACTGCGGGTAAAACCACAAT 58.010 45.000 0.00 0.00 41.02 2.71
824 871 1.743394 GGGTGGAGAAAAATACTGCGG 59.257 52.381 0.00 0.00 0.00 5.69
828 875 6.078456 TCATCATGGGTGGAGAAAAATACT 57.922 37.500 0.00 0.00 0.00 2.12
834 881 4.227982 TGAGAATCATCATGGGTGGAGAAA 59.772 41.667 0.00 0.00 42.56 2.52
850 897 1.815003 CACCCAAGGCAGTTGAGAATC 59.185 52.381 0.00 0.00 38.60 2.52
880 2665 0.589708 GGAAACTGTTACGGCCACAC 59.410 55.000 2.24 0.00 0.00 3.82
921 2706 1.843734 TAGCGGCCGTTTTTCCGTTG 61.844 55.000 28.70 0.00 46.79 4.10
990 2786 2.285368 AACGCCATGGAGGAGGGA 60.285 61.111 18.40 0.00 42.23 4.20
991 2787 2.190578 GAACGCCATGGAGGAGGG 59.809 66.667 18.40 0.00 42.23 4.30
1069 2878 4.567385 GAGCAGGAGGAGCGCGAG 62.567 72.222 12.10 0.00 37.01 5.03
1122 2931 1.229723 GGGTGGGTGGTAAGGAGGA 60.230 63.158 0.00 0.00 0.00 3.71
1124 2933 1.683441 GTGGGTGGGTGGTAAGGAG 59.317 63.158 0.00 0.00 0.00 3.69
1128 2937 2.038654 TGGGTGGGTGGGTGGTAA 60.039 61.111 0.00 0.00 0.00 2.85
1129 2938 2.855014 GTGGGTGGGTGGGTGGTA 60.855 66.667 0.00 0.00 0.00 3.25
1135 2944 4.329545 CGGAGTGTGGGTGGGTGG 62.330 72.222 0.00 0.00 0.00 4.61
1145 2954 2.421739 GTGTGGAGTGCGGAGTGT 59.578 61.111 0.00 0.00 0.00 3.55
1241 3055 4.150454 AGGAGCGAGGGAGGGAGG 62.150 72.222 0.00 0.00 0.00 4.30
1242 3056 2.837291 CAGGAGCGAGGGAGGGAG 60.837 72.222 0.00 0.00 0.00 4.30
1243 3057 3.347590 TCAGGAGCGAGGGAGGGA 61.348 66.667 0.00 0.00 0.00 4.20
1244 3058 3.151022 GTCAGGAGCGAGGGAGGG 61.151 72.222 0.00 0.00 0.00 4.30
1389 3220 8.630917 AGAGTTAGAGCGTCTATTTATTAAGCA 58.369 33.333 0.00 0.00 0.00 3.91
1394 3225 7.133513 CGTCAGAGTTAGAGCGTCTATTTATT 58.866 38.462 0.00 0.00 0.00 1.40
1396 3227 5.503683 GCGTCAGAGTTAGAGCGTCTATTTA 60.504 44.000 0.00 0.00 0.00 1.40
1398 3229 3.242804 GCGTCAGAGTTAGAGCGTCTATT 60.243 47.826 0.00 0.00 0.00 1.73
1399 3230 2.288458 GCGTCAGAGTTAGAGCGTCTAT 59.712 50.000 0.00 0.00 0.00 1.98
1400 3231 1.664659 GCGTCAGAGTTAGAGCGTCTA 59.335 52.381 0.00 0.00 0.00 2.59
1401 3232 0.448593 GCGTCAGAGTTAGAGCGTCT 59.551 55.000 0.00 0.00 0.00 4.18
1402 3233 0.448593 AGCGTCAGAGTTAGAGCGTC 59.551 55.000 0.00 0.00 0.00 5.19
1403 3234 0.169230 CAGCGTCAGAGTTAGAGCGT 59.831 55.000 0.00 0.00 0.00 5.07
1404 3235 1.136872 GCAGCGTCAGAGTTAGAGCG 61.137 60.000 0.00 0.00 0.00 5.03
1405 3236 0.804156 GGCAGCGTCAGAGTTAGAGC 60.804 60.000 0.00 0.00 0.00 4.09
1412 3243 1.416813 GATTCACGGCAGCGTCAGAG 61.417 60.000 0.00 0.00 0.00 3.35
1491 3322 2.747855 GAAGTGGAAGCGGGGCAG 60.748 66.667 0.00 0.00 0.00 4.85
1495 3326 2.045926 CTGGGAAGTGGAAGCGGG 60.046 66.667 0.00 0.00 0.00 6.13
1496 3327 2.747855 GCTGGGAAGTGGAAGCGG 60.748 66.667 0.00 0.00 0.00 5.52
1497 3328 2.747855 GGCTGGGAAGTGGAAGCG 60.748 66.667 0.00 0.00 36.50 4.68
1498 3329 2.361737 GGGCTGGGAAGTGGAAGC 60.362 66.667 0.00 0.00 34.86 3.86
1500 3331 2.538141 CCTGGGCTGGGAAGTGGAA 61.538 63.158 0.00 0.00 0.00 3.53
1502 3333 1.867595 ATTCCTGGGCTGGGAAGTGG 61.868 60.000 14.57 0.00 44.68 4.00
1503 3334 0.394899 GATTCCTGGGCTGGGAAGTG 60.395 60.000 14.57 0.00 44.68 3.16
1509 3340 0.106819 CTCCAAGATTCCTGGGCTGG 60.107 60.000 1.45 0.00 33.23 4.85
1522 3356 3.716006 CACACGCACGGCTCCAAG 61.716 66.667 0.00 0.00 0.00 3.61
1528 3362 2.127270 CACAATCACACGCACGGC 60.127 61.111 0.00 0.00 0.00 5.68
1534 3368 0.936600 TCACACTGCACAATCACACG 59.063 50.000 0.00 0.00 0.00 4.49
1548 3382 2.167487 ACAACCCCACATTGTTTCACAC 59.833 45.455 0.00 0.00 36.93 3.82
1586 3420 2.484264 GGTCTTGTTGAAATCCTCCACG 59.516 50.000 0.00 0.00 0.00 4.94
1608 3442 2.503375 CTGGTCGGTGTACGCGAC 60.503 66.667 15.93 17.43 43.86 5.19
1746 3580 1.970917 CTCTTGACGGCGGAACATGC 61.971 60.000 13.24 0.00 0.00 4.06
1753 3587 1.901650 GCAACTTCTCTTGACGGCGG 61.902 60.000 13.24 0.00 0.00 6.13
1763 3597 7.706607 ACCTAAAATCAGTTTTTGCAACTTCTC 59.293 33.333 0.00 0.00 38.03 2.87
1765 3599 7.770801 ACCTAAAATCAGTTTTTGCAACTTC 57.229 32.000 0.00 0.00 38.03 3.01
1768 3602 7.770801 AGAACCTAAAATCAGTTTTTGCAAC 57.229 32.000 0.00 0.00 38.03 4.17
1780 3614 5.063564 CCGCTGAGTGTTAGAACCTAAAATC 59.936 44.000 0.00 0.00 0.00 2.17
1781 3615 4.935808 CCGCTGAGTGTTAGAACCTAAAAT 59.064 41.667 0.00 0.00 0.00 1.82
1788 3622 1.270147 ACCACCGCTGAGTGTTAGAAC 60.270 52.381 0.00 0.00 35.93 3.01
1796 3630 0.759346 AAGAAGAACCACCGCTGAGT 59.241 50.000 0.00 0.00 0.00 3.41
1839 3673 3.005539 TCCAGTGGCTGCTCCTCC 61.006 66.667 3.51 0.00 35.26 4.30
1860 3694 1.134280 AGATTGTTGGCCTCTGATCCG 60.134 52.381 3.32 0.00 0.00 4.18
1869 3703 2.224018 TGCACTTGAAAGATTGTTGGCC 60.224 45.455 0.00 0.00 0.00 5.36
1898 3732 4.659172 CGGGTCTTTGGGCTGCCA 62.659 66.667 22.05 3.69 0.00 4.92
1903 3737 2.325393 ATCGGATCGGGTCTTTGGGC 62.325 60.000 0.00 0.00 0.00 5.36
1949 3784 6.885735 ACAAAACAACTATGCAAGACAAAC 57.114 33.333 0.00 0.00 0.00 2.93
1987 3822 3.181520 ACTTGCGACGTAAAGATGAATGC 60.182 43.478 16.17 0.00 0.00 3.56
1989 3824 3.994392 ACACTTGCGACGTAAAGATGAAT 59.006 39.130 16.17 0.00 0.00 2.57
2033 3973 5.750547 CGACAGCAATGAATAAGAGCTAGAA 59.249 40.000 0.00 0.00 33.59 2.10
2036 3976 3.804325 GCGACAGCAATGAATAAGAGCTA 59.196 43.478 0.00 0.00 44.35 3.32
2059 3999 4.966965 ACCGTGTGATGTTTACAACAAA 57.033 36.364 0.00 0.00 45.86 2.83
2279 4219 5.221925 ACCTTGGCCATTATTATCTGATCGT 60.222 40.000 6.09 0.00 0.00 3.73
2280 4220 5.122869 CACCTTGGCCATTATTATCTGATCG 59.877 44.000 6.09 0.00 0.00 3.69
2388 4328 0.110295 TGTCCATATTGGCATCCCCG 59.890 55.000 0.00 0.00 37.47 5.73
2397 4337 5.882000 TGAATCCAGTTCACTGTCCATATTG 59.118 40.000 6.22 0.00 41.79 1.90
2398 4338 6.065976 TGAATCCAGTTCACTGTCCATATT 57.934 37.500 6.22 0.00 41.79 1.28
2451 4392 6.442513 ACAAGAAACTGAAGAAAAGTCTGG 57.557 37.500 0.00 0.00 33.05 3.86
2492 4503 6.859112 AGAGAGGGCGACAATATATACATT 57.141 37.500 0.00 0.00 0.00 2.71
2503 4519 0.318441 CAGAACAAGAGAGGGCGACA 59.682 55.000 0.00 0.00 0.00 4.35
2504 4520 1.016653 GCAGAACAAGAGAGGGCGAC 61.017 60.000 0.00 0.00 0.00 5.19
2505 4521 1.293498 GCAGAACAAGAGAGGGCGA 59.707 57.895 0.00 0.00 0.00 5.54
2506 4522 1.004560 TGCAGAACAAGAGAGGGCG 60.005 57.895 0.00 0.00 0.00 6.13
2507 4523 1.304509 GCTGCAGAACAAGAGAGGGC 61.305 60.000 20.43 0.00 0.00 5.19
2601 4617 5.035443 AGCATAACACGTAATCTTCTCGAC 58.965 41.667 0.00 0.00 0.00 4.20
2604 4620 4.566759 TGCAGCATAACACGTAATCTTCTC 59.433 41.667 0.00 0.00 0.00 2.87
2613 4629 1.014044 CGGACTGCAGCATAACACGT 61.014 55.000 15.27 0.00 0.00 4.49
2820 4836 3.117851 AGTGATAGAGTGACCGATCCTCA 60.118 47.826 0.00 0.00 0.00 3.86
3078 5149 2.957491 ATTCCTTGAGACGAGCTGAG 57.043 50.000 0.00 0.00 0.00 3.35
3234 5305 6.263516 ACAACATCATCATCAAGAAACAGG 57.736 37.500 0.00 0.00 0.00 4.00
3288 5359 6.995511 TTTACCATCCCTTTAAGATCAACG 57.004 37.500 0.00 0.00 0.00 4.10
3455 5526 1.808411 TCCAGTGATGTTTCGCTTCC 58.192 50.000 0.00 0.00 40.75 3.46
3567 5638 3.542712 TGTTGTAAGAGGACGACGTAC 57.457 47.619 0.62 0.62 36.63 3.67
3572 5643 2.230508 AGCGATTGTTGTAAGAGGACGA 59.769 45.455 0.00 0.00 0.00 4.20
3573 5644 2.607187 AGCGATTGTTGTAAGAGGACG 58.393 47.619 0.00 0.00 0.00 4.79
3577 5648 4.449068 ACTGACAAGCGATTGTTGTAAGAG 59.551 41.667 21.37 11.63 38.29 2.85
3602 5673 2.421529 CCTTATTTTGGGTCGGAGGGAG 60.422 54.545 0.00 0.00 0.00 4.30
3603 5674 1.562475 CCTTATTTTGGGTCGGAGGGA 59.438 52.381 0.00 0.00 0.00 4.20
3604 5675 1.283905 ACCTTATTTTGGGTCGGAGGG 59.716 52.381 0.00 0.00 0.00 4.30
3605 5676 2.801077 ACCTTATTTTGGGTCGGAGG 57.199 50.000 0.00 0.00 0.00 4.30
3606 5677 6.578163 TTAAAACCTTATTTTGGGTCGGAG 57.422 37.500 0.00 0.00 34.35 4.63
3607 5678 6.747125 GTTTAAAACCTTATTTTGGGTCGGA 58.253 36.000 0.00 0.00 34.35 4.55
3624 5695 8.927721 GTTGCAGTTTTGAACTAAGGTTTAAAA 58.072 29.630 7.23 7.23 43.57 1.52
3625 5696 8.088981 TGTTGCAGTTTTGAACTAAGGTTTAAA 58.911 29.630 0.00 0.00 40.46 1.52
3626 5697 7.542824 GTGTTGCAGTTTTGAACTAAGGTTTAA 59.457 33.333 0.00 0.00 40.46 1.52
3627 5698 7.030768 GTGTTGCAGTTTTGAACTAAGGTTTA 58.969 34.615 0.00 0.00 40.46 2.01
3628 5699 5.867174 GTGTTGCAGTTTTGAACTAAGGTTT 59.133 36.000 0.00 0.00 40.46 3.27
3629 5700 5.185056 AGTGTTGCAGTTTTGAACTAAGGTT 59.815 36.000 0.00 0.00 40.46 3.50
3630 5701 4.705023 AGTGTTGCAGTTTTGAACTAAGGT 59.295 37.500 0.00 0.00 40.46 3.50
3631 5702 5.248870 AGTGTTGCAGTTTTGAACTAAGG 57.751 39.130 0.00 0.00 40.46 2.69
3632 5703 8.856490 AATAAGTGTTGCAGTTTTGAACTAAG 57.144 30.769 0.00 0.00 40.46 2.18
3634 5705 9.891828 CATAATAAGTGTTGCAGTTTTGAACTA 57.108 29.630 0.00 0.00 40.46 2.24
3635 5706 7.867403 CCATAATAAGTGTTGCAGTTTTGAACT 59.133 33.333 0.00 0.00 44.06 3.01
3636 5707 7.116233 CCCATAATAAGTGTTGCAGTTTTGAAC 59.884 37.037 0.00 0.00 0.00 3.18
3637 5708 7.151308 CCCATAATAAGTGTTGCAGTTTTGAA 58.849 34.615 0.00 0.00 0.00 2.69
3638 5709 6.266558 ACCCATAATAAGTGTTGCAGTTTTGA 59.733 34.615 0.00 0.00 0.00 2.69
3639 5710 6.454795 ACCCATAATAAGTGTTGCAGTTTTG 58.545 36.000 0.00 0.00 0.00 2.44
3640 5711 6.569610 CGACCCATAATAAGTGTTGCAGTTTT 60.570 38.462 0.00 0.00 0.00 2.43
3641 5712 5.106317 CGACCCATAATAAGTGTTGCAGTTT 60.106 40.000 0.00 0.00 0.00 2.66
3642 5713 4.394920 CGACCCATAATAAGTGTTGCAGTT 59.605 41.667 0.00 0.00 0.00 3.16
3643 5714 3.938963 CGACCCATAATAAGTGTTGCAGT 59.061 43.478 0.00 0.00 0.00 4.40
3644 5715 3.312421 CCGACCCATAATAAGTGTTGCAG 59.688 47.826 0.00 0.00 0.00 4.41
3645 5716 3.055021 TCCGACCCATAATAAGTGTTGCA 60.055 43.478 0.00 0.00 0.00 4.08
3646 5717 3.537580 TCCGACCCATAATAAGTGTTGC 58.462 45.455 0.00 0.00 0.00 4.17
3647 5718 4.127171 CCTCCGACCCATAATAAGTGTTG 58.873 47.826 0.00 0.00 0.00 3.33
3648 5719 3.135895 CCCTCCGACCCATAATAAGTGTT 59.864 47.826 0.00 0.00 0.00 3.32
3649 5720 2.704065 CCCTCCGACCCATAATAAGTGT 59.296 50.000 0.00 0.00 0.00 3.55
3650 5721 2.969950 TCCCTCCGACCCATAATAAGTG 59.030 50.000 0.00 0.00 0.00 3.16
3651 5722 3.240302 CTCCCTCCGACCCATAATAAGT 58.760 50.000 0.00 0.00 0.00 2.24
3652 5723 3.240302 ACTCCCTCCGACCCATAATAAG 58.760 50.000 0.00 0.00 0.00 1.73
3653 5724 3.339713 ACTCCCTCCGACCCATAATAA 57.660 47.619 0.00 0.00 0.00 1.40
3654 5725 3.816842 GCTACTCCCTCCGACCCATAATA 60.817 52.174 0.00 0.00 0.00 0.98
3655 5726 2.890814 CTACTCCCTCCGACCCATAAT 58.109 52.381 0.00 0.00 0.00 1.28
3656 5727 1.756690 GCTACTCCCTCCGACCCATAA 60.757 57.143 0.00 0.00 0.00 1.90
3657 5728 0.178970 GCTACTCCCTCCGACCCATA 60.179 60.000 0.00 0.00 0.00 2.74
3658 5729 1.457831 GCTACTCCCTCCGACCCAT 60.458 63.158 0.00 0.00 0.00 4.00
3659 5730 2.043248 GCTACTCCCTCCGACCCA 60.043 66.667 0.00 0.00 0.00 4.51
3660 5731 0.976590 AAAGCTACTCCCTCCGACCC 60.977 60.000 0.00 0.00 0.00 4.46
3661 5732 0.903236 AAAAGCTACTCCCTCCGACC 59.097 55.000 0.00 0.00 0.00 4.79
3662 5733 4.120589 CAATAAAAGCTACTCCCTCCGAC 58.879 47.826 0.00 0.00 0.00 4.79
3663 5734 3.134081 CCAATAAAAGCTACTCCCTCCGA 59.866 47.826 0.00 0.00 0.00 4.55
3664 5735 3.118371 ACCAATAAAAGCTACTCCCTCCG 60.118 47.826 0.00 0.00 0.00 4.63
3665 5736 4.505324 ACCAATAAAAGCTACTCCCTCC 57.495 45.455 0.00 0.00 0.00 4.30
3666 5737 6.835819 AAAACCAATAAAAGCTACTCCCTC 57.164 37.500 0.00 0.00 0.00 4.30
3667 5738 7.467650 AGTAAAACCAATAAAAGCTACTCCCT 58.532 34.615 0.00 0.00 0.00 4.20
3668 5739 7.698506 AGTAAAACCAATAAAAGCTACTCCC 57.301 36.000 0.00 0.00 0.00 4.30
3689 5760 9.477484 CTGAAAAACAGCTTCTCTTAGTAAGTA 57.523 33.333 9.71 0.00 39.86 2.24
3712 5783 3.264947 CAACTTGCGATCCTCATTCTGA 58.735 45.455 0.00 0.00 0.00 3.27
3826 5898 1.202110 GCAATGTCAACAGCAGGATCG 60.202 52.381 0.00 0.00 0.00 3.69
3877 5949 2.431782 CCAGGGCTTGTAATTCCCATTG 59.568 50.000 2.24 0.00 42.52 2.82
4039 6111 2.532843 ACCTAACTCGCTCCTGGTAAA 58.467 47.619 0.00 0.00 0.00 2.01
4040 6112 2.226962 ACCTAACTCGCTCCTGGTAA 57.773 50.000 0.00 0.00 0.00 2.85
4041 6113 2.507058 TCTACCTAACTCGCTCCTGGTA 59.493 50.000 0.00 0.00 0.00 3.25
4078 6150 6.270815 ACAAGATTATGATGCTGAACAATGC 58.729 36.000 0.00 0.00 0.00 3.56
4152 6311 8.894409 TTTACTATGCTGTGAATTTCAAATCG 57.106 30.769 0.00 0.00 0.00 3.34
4162 6321 9.890629 ACAGAAGAATATTTACTATGCTGTGAA 57.109 29.630 0.00 0.00 32.30 3.18
4188 6347 0.825425 TTGCCATTGCCGGTTGAGAA 60.825 50.000 1.90 0.00 36.33 2.87
4191 6350 0.611618 AGATTGCCATTGCCGGTTGA 60.612 50.000 1.90 0.00 36.33 3.18
4192 6351 0.179129 GAGATTGCCATTGCCGGTTG 60.179 55.000 1.90 0.00 36.33 3.77
4193 6352 0.611618 TGAGATTGCCATTGCCGGTT 60.612 50.000 1.90 0.00 36.33 4.44
4194 6353 0.611618 TTGAGATTGCCATTGCCGGT 60.612 50.000 1.90 0.00 36.33 5.28
4195 6354 0.179129 GTTGAGATTGCCATTGCCGG 60.179 55.000 0.00 0.00 36.33 6.13
4196 6355 0.179129 GGTTGAGATTGCCATTGCCG 60.179 55.000 0.00 0.00 36.33 5.69
4197 6356 0.179129 CGGTTGAGATTGCCATTGCC 60.179 55.000 0.00 0.00 36.33 4.52
4420 6587 0.533491 GCAATCAAGCAGCAATGGGA 59.467 50.000 0.00 0.00 0.00 4.37
4579 6746 2.575262 GCTTGCGCGCAGTGATTC 60.575 61.111 34.25 15.94 43.07 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.