Multiple sequence alignment - TraesCS7B01G472500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G472500 chr7B 100.000 7200 0 0 1 7200 728688640 728695839 0.000000e+00 13296.0
1 TraesCS7B01G472500 chr7B 87.410 1390 154 12 2250 3634 728625509 728626882 0.000000e+00 1578.0
2 TraesCS7B01G472500 chr7B 85.793 1443 183 18 2303 3735 728667319 728668749 0.000000e+00 1509.0
3 TraesCS7B01G472500 chr7B 80.505 277 43 7 1629 1900 728624971 728625241 1.220000e-47 202.0
4 TraesCS7B01G472500 chr7B 83.117 231 29 3 6589 6812 743927018 743927245 1.220000e-47 202.0
5 TraesCS7B01G472500 chr7B 83.465 127 16 3 1960 2081 728625327 728625453 5.900000e-21 113.0
6 TraesCS7B01G472500 chr7B 96.000 50 2 0 7145 7194 743918796 743918845 1.660000e-11 82.4
7 TraesCS7B01G472500 chr7B 96.000 50 2 0 7145 7194 743964072 743964121 1.660000e-11 82.4
8 TraesCS7B01G472500 chr7D 92.824 3205 178 37 3785 6966 627324615 627321440 0.000000e+00 4597.0
9 TraesCS7B01G472500 chr7D 97.521 1533 34 4 2258 3788 627326330 627324800 0.000000e+00 2617.0
10 TraesCS7B01G472500 chr7D 87.730 1304 141 9 2335 3633 627357731 627356442 0.000000e+00 1504.0
11 TraesCS7B01G472500 chr7D 85.929 1400 177 16 2345 3734 627348957 627347568 0.000000e+00 1476.0
12 TraesCS7B01G472500 chr7D 89.687 543 45 9 1573 2113 627326896 627326363 0.000000e+00 682.0
13 TraesCS7B01G472500 chr7D 82.686 849 58 30 664 1475 627327759 627326963 0.000000e+00 671.0
14 TraesCS7B01G472500 chr7D 75.534 609 94 32 1509 2084 627358407 627357821 1.550000e-61 248.0
15 TraesCS7B01G472500 chr7D 91.617 167 6 2 36 200 600764281 600764441 2.610000e-54 224.0
16 TraesCS7B01G472500 chr7D 82.075 212 35 2 201 409 627328355 627328144 2.060000e-40 178.0
17 TraesCS7B01G472500 chr7D 85.227 88 6 6 746 827 627359117 627359031 4.630000e-12 84.2
18 TraesCS7B01G472500 chr7D 92.308 52 3 1 7107 7157 627321361 627321310 1.000000e-08 73.1
19 TraesCS7B01G472500 chr7A 89.870 3297 236 55 558 3788 723265650 723262386 0.000000e+00 4148.0
20 TraesCS7B01G472500 chr7A 93.964 2634 124 23 4583 7200 723261476 723258862 0.000000e+00 3951.0
21 TraesCS7B01G472500 chr7A 87.311 1387 155 12 2252 3634 723292309 723290940 0.000000e+00 1567.0
22 TraesCS7B01G472500 chr7A 85.594 1430 188 15 2297 3715 723278652 723277230 0.000000e+00 1483.0
23 TraesCS7B01G472500 chr7A 90.392 739 56 10 3787 4519 723262199 723261470 0.000000e+00 957.0
24 TraesCS7B01G472500 chr7A 91.716 169 7 6 36 202 14929661 14929824 2.020000e-55 228.0
25 TraesCS7B01G472500 chr7A 77.295 414 62 19 3793 4179 723276697 723276289 1.570000e-51 215.0
26 TraesCS7B01G472500 chr7A 74.776 559 94 21 1509 2038 723292979 723292439 2.630000e-49 207.0
27 TraesCS7B01G472500 chr2B 92.262 168 5 2 36 201 296085574 296085735 1.560000e-56 231.0
28 TraesCS7B01G472500 chr5B 90.055 181 8 5 28 205 400107905 400107732 7.270000e-55 226.0
29 TraesCS7B01G472500 chr5B 88.710 186 9 6 25 207 628606758 628606582 4.370000e-52 217.0
30 TraesCS7B01G472500 chr2D 91.617 167 6 3 36 200 391461635 391461475 2.610000e-54 224.0
31 TraesCS7B01G472500 chr2D 92.188 64 5 0 1961 2024 94906808 94906871 2.770000e-14 91.6
32 TraesCS7B01G472500 chr1B 91.124 169 7 3 35 201 17384725 17384563 9.400000e-54 222.0
33 TraesCS7B01G472500 chr4B 90.698 172 6 4 36 204 49076911 49077075 3.380000e-53 220.0
34 TraesCS7B01G472500 chr3A 90.230 174 7 7 31 201 43829113 43829279 1.220000e-52 219.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G472500 chr7B 728688640 728695839 7199 False 13296.000000 13296 100.000000 1 7200 1 chr7B.!!$F2 7199
1 TraesCS7B01G472500 chr7B 728667319 728668749 1430 False 1509.000000 1509 85.793000 2303 3735 1 chr7B.!!$F1 1432
2 TraesCS7B01G472500 chr7B 728624971 728626882 1911 False 631.000000 1578 83.793333 1629 3634 3 chr7B.!!$F6 2005
3 TraesCS7B01G472500 chr7D 627347568 627348957 1389 True 1476.000000 1476 85.929000 2345 3734 1 chr7D.!!$R1 1389
4 TraesCS7B01G472500 chr7D 627321310 627328355 7045 True 1469.683333 4597 89.516833 201 7157 6 chr7D.!!$R2 6956
5 TraesCS7B01G472500 chr7D 627356442 627359117 2675 True 612.066667 1504 82.830333 746 3633 3 chr7D.!!$R3 2887
6 TraesCS7B01G472500 chr7A 723258862 723265650 6788 True 3018.666667 4148 91.408667 558 7200 3 chr7A.!!$R1 6642
7 TraesCS7B01G472500 chr7A 723290940 723292979 2039 True 887.000000 1567 81.043500 1509 3634 2 chr7A.!!$R3 2125
8 TraesCS7B01G472500 chr7A 723276289 723278652 2363 True 849.000000 1483 81.444500 2297 4179 2 chr7A.!!$R2 1882

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
413 417 0.036765 GTGAGGGGTTGCGATACACA 60.037 55.000 0.00 0.0 0.00 3.72 F
1265 1532 0.109342 CCTATCCAGATTTGCGGCCT 59.891 55.000 0.00 0.0 0.00 5.19 F
1685 2026 0.376502 GCCAAGAGCGATTTCTCTGC 59.623 55.000 0.00 0.0 42.25 4.26 F
2661 3088 1.710244 TGTTCACTGGGATCCACCAAT 59.290 47.619 15.23 0.0 40.68 3.16 F
3705 4146 1.052124 TCCCTCCTTTGTCGGTGTGT 61.052 55.000 0.00 0.0 0.00 3.72 F
3895 4801 0.466007 TGACTTGCAGCCTGCTTCAA 60.466 50.000 18.96 6.8 45.31 2.69 F
3896 4802 0.886563 GACTTGCAGCCTGCTTCAAT 59.113 50.000 18.96 0.0 45.31 2.57 F
4786 5724 1.004394 TGGTCTCGTAGCTCTCTTGGA 59.996 52.381 0.00 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 2018 0.318441 CAGACACGGGAGCAGAGAAA 59.682 55.000 0.00 0.00 0.00 2.52 R
2201 2622 0.322277 AGCACAGGACAAGCCATGAG 60.322 55.000 0.00 0.00 40.02 2.90 R
3053 3491 2.032030 CAGAACACGCAACCCTAAACTG 60.032 50.000 0.00 0.00 0.00 3.16 R
3876 4782 0.466007 TTGAAGCAGGCTGCAAGTCA 60.466 50.000 38.09 31.58 44.82 3.41 R
4823 5761 1.065272 TGGAACCCCGTGTAAATAGCC 60.065 52.381 0.00 0.00 34.29 3.93 R
5879 6822 0.827368 CTCCTGGTACTCCTTCAGGC 59.173 60.000 9.55 0.00 45.58 4.85 R
5957 6900 9.811995 CTAGTAATTAGCATTACCACACAAGTA 57.188 33.333 3.89 0.00 44.23 2.24 R
6812 7764 0.033601 TGTGGGCAAACAAGACCTGT 60.034 50.000 0.00 0.00 41.27 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.640473 AGAACTCCAACCCAACCCA 58.360 52.632 0.00 0.00 0.00 4.51
19 20 0.930726 AGAACTCCAACCCAACCCAA 59.069 50.000 0.00 0.00 0.00 4.12
20 21 1.037493 GAACTCCAACCCAACCCAAC 58.963 55.000 0.00 0.00 0.00 3.77
21 22 0.397957 AACTCCAACCCAACCCAACC 60.398 55.000 0.00 0.00 0.00 3.77
22 23 1.231641 CTCCAACCCAACCCAACCA 59.768 57.895 0.00 0.00 0.00 3.67
23 24 1.075896 TCCAACCCAACCCAACCAC 60.076 57.895 0.00 0.00 0.00 4.16
24 25 1.381872 CCAACCCAACCCAACCACA 60.382 57.895 0.00 0.00 0.00 4.17
25 26 0.762461 CCAACCCAACCCAACCACAT 60.762 55.000 0.00 0.00 0.00 3.21
26 27 0.392336 CAACCCAACCCAACCACATG 59.608 55.000 0.00 0.00 0.00 3.21
27 28 1.406860 AACCCAACCCAACCACATGC 61.407 55.000 0.00 0.00 0.00 4.06
28 29 1.533753 CCCAACCCAACCACATGCT 60.534 57.895 0.00 0.00 0.00 3.79
29 30 0.251564 CCCAACCCAACCACATGCTA 60.252 55.000 0.00 0.00 0.00 3.49
30 31 1.619432 CCCAACCCAACCACATGCTAT 60.619 52.381 0.00 0.00 0.00 2.97
31 32 2.357673 CCCAACCCAACCACATGCTATA 60.358 50.000 0.00 0.00 0.00 1.31
32 33 2.687935 CCAACCCAACCACATGCTATAC 59.312 50.000 0.00 0.00 0.00 1.47
33 34 2.325583 ACCCAACCACATGCTATACG 57.674 50.000 0.00 0.00 0.00 3.06
34 35 1.134220 ACCCAACCACATGCTATACGG 60.134 52.381 0.00 0.00 0.00 4.02
35 36 1.134220 CCCAACCACATGCTATACGGT 60.134 52.381 0.00 0.00 0.00 4.83
36 37 2.103432 CCCAACCACATGCTATACGGTA 59.897 50.000 0.00 0.00 0.00 4.02
37 38 3.390135 CCAACCACATGCTATACGGTAG 58.610 50.000 0.00 0.00 0.00 3.18
38 39 3.390135 CAACCACATGCTATACGGTAGG 58.610 50.000 0.00 0.00 0.00 3.18
39 40 1.968493 ACCACATGCTATACGGTAGGG 59.032 52.381 0.00 0.00 0.00 3.53
40 41 2.244695 CCACATGCTATACGGTAGGGA 58.755 52.381 0.00 0.00 0.00 4.20
41 42 2.832129 CCACATGCTATACGGTAGGGAT 59.168 50.000 0.00 0.00 0.00 3.85
42 43 3.368427 CCACATGCTATACGGTAGGGATG 60.368 52.174 17.19 17.19 34.51 3.51
43 44 3.258372 CACATGCTATACGGTAGGGATGT 59.742 47.826 18.08 18.08 40.36 3.06
44 45 4.461431 CACATGCTATACGGTAGGGATGTA 59.539 45.833 21.03 0.00 38.35 2.29
45 46 5.047590 CACATGCTATACGGTAGGGATGTAA 60.048 44.000 21.03 0.00 38.35 2.41
46 47 5.185249 ACATGCTATACGGTAGGGATGTAAG 59.815 44.000 20.51 4.99 38.56 2.34
47 48 4.733165 TGCTATACGGTAGGGATGTAAGT 58.267 43.478 0.00 0.00 0.00 2.24
48 49 4.521639 TGCTATACGGTAGGGATGTAAGTG 59.478 45.833 0.00 0.00 0.00 3.16
49 50 4.082354 GCTATACGGTAGGGATGTAAGTGG 60.082 50.000 0.00 0.00 0.00 4.00
50 51 0.828677 ACGGTAGGGATGTAAGTGGC 59.171 55.000 0.00 0.00 0.00 5.01
51 52 0.828022 CGGTAGGGATGTAAGTGGCA 59.172 55.000 0.00 0.00 0.00 4.92
52 53 1.208535 CGGTAGGGATGTAAGTGGCAA 59.791 52.381 0.00 0.00 0.00 4.52
53 54 2.355310 CGGTAGGGATGTAAGTGGCAAA 60.355 50.000 0.00 0.00 0.00 3.68
54 55 3.684413 CGGTAGGGATGTAAGTGGCAAAT 60.684 47.826 0.00 0.00 0.00 2.32
55 56 4.443739 CGGTAGGGATGTAAGTGGCAAATA 60.444 45.833 0.00 0.00 0.00 1.40
56 57 5.442391 GGTAGGGATGTAAGTGGCAAATAA 58.558 41.667 0.00 0.00 0.00 1.40
57 58 5.889289 GGTAGGGATGTAAGTGGCAAATAAA 59.111 40.000 0.00 0.00 0.00 1.40
58 59 6.549736 GGTAGGGATGTAAGTGGCAAATAAAT 59.450 38.462 0.00 0.00 0.00 1.40
59 60 6.469782 AGGGATGTAAGTGGCAAATAAATG 57.530 37.500 0.00 0.00 0.00 2.32
60 61 5.363580 AGGGATGTAAGTGGCAAATAAATGG 59.636 40.000 0.00 0.00 0.00 3.16
61 62 5.049828 GGATGTAAGTGGCAAATAAATGGC 58.950 41.667 0.00 0.00 45.44 4.40
66 67 3.250220 GGCAAATAAATGGCGTCCG 57.750 52.632 0.00 0.00 36.07 4.79
67 68 0.869880 GGCAAATAAATGGCGTCCGC 60.870 55.000 2.45 2.45 36.07 5.54
68 69 0.179150 GCAAATAAATGGCGTCCGCA 60.179 50.000 14.19 0.24 44.11 5.69
69 70 1.734047 GCAAATAAATGGCGTCCGCAA 60.734 47.619 14.19 1.87 44.11 4.85
70 71 2.808244 CAAATAAATGGCGTCCGCAAT 58.192 42.857 14.19 4.68 44.11 3.56
71 72 2.774439 AATAAATGGCGTCCGCAATC 57.226 45.000 14.19 0.00 44.11 2.67
72 73 0.951558 ATAAATGGCGTCCGCAATCC 59.048 50.000 14.19 0.00 44.11 3.01
73 74 1.098712 TAAATGGCGTCCGCAATCCC 61.099 55.000 14.19 0.00 44.11 3.85
77 78 3.428282 GCGTCCGCAATCCCGTTT 61.428 61.111 6.82 0.00 41.49 3.60
78 79 2.101835 GCGTCCGCAATCCCGTTTA 61.102 57.895 6.82 0.00 41.49 2.01
79 80 2.003672 CGTCCGCAATCCCGTTTAG 58.996 57.895 0.00 0.00 0.00 1.85
80 81 0.738412 CGTCCGCAATCCCGTTTAGT 60.738 55.000 0.00 0.00 0.00 2.24
81 82 1.445871 GTCCGCAATCCCGTTTAGTT 58.554 50.000 0.00 0.00 0.00 2.24
82 83 2.620242 GTCCGCAATCCCGTTTAGTTA 58.380 47.619 0.00 0.00 0.00 2.24
83 84 2.606272 GTCCGCAATCCCGTTTAGTTAG 59.394 50.000 0.00 0.00 0.00 2.34
84 85 2.234414 TCCGCAATCCCGTTTAGTTAGT 59.766 45.455 0.00 0.00 0.00 2.24
85 86 3.004862 CCGCAATCCCGTTTAGTTAGTT 58.995 45.455 0.00 0.00 0.00 2.24
86 87 3.437741 CCGCAATCCCGTTTAGTTAGTTT 59.562 43.478 0.00 0.00 0.00 2.66
87 88 4.083164 CCGCAATCCCGTTTAGTTAGTTTT 60.083 41.667 0.00 0.00 0.00 2.43
88 89 5.454520 CGCAATCCCGTTTAGTTAGTTTTT 58.545 37.500 0.00 0.00 0.00 1.94
89 90 5.341196 CGCAATCCCGTTTAGTTAGTTTTTG 59.659 40.000 0.00 0.00 0.00 2.44
90 91 5.118050 GCAATCCCGTTTAGTTAGTTTTTGC 59.882 40.000 0.00 0.00 0.00 3.68
91 92 6.443792 CAATCCCGTTTAGTTAGTTTTTGCT 58.556 36.000 0.00 0.00 0.00 3.91
92 93 7.586747 CAATCCCGTTTAGTTAGTTTTTGCTA 58.413 34.615 0.00 0.00 0.00 3.49
93 94 6.790285 TCCCGTTTAGTTAGTTTTTGCTAG 57.210 37.500 0.00 0.00 0.00 3.42
94 95 5.179929 TCCCGTTTAGTTAGTTTTTGCTAGC 59.820 40.000 8.10 8.10 0.00 3.42
95 96 5.180680 CCCGTTTAGTTAGTTTTTGCTAGCT 59.819 40.000 17.23 0.00 36.65 3.32
96 97 6.293790 CCCGTTTAGTTAGTTTTTGCTAGCTT 60.294 38.462 17.23 0.00 34.92 3.74
97 98 6.577427 CCGTTTAGTTAGTTTTTGCTAGCTTG 59.423 38.462 17.23 0.00 34.92 4.01
98 99 7.349711 CGTTTAGTTAGTTTTTGCTAGCTTGA 58.650 34.615 17.23 0.00 34.92 3.02
99 100 8.015658 CGTTTAGTTAGTTTTTGCTAGCTTGAT 58.984 33.333 17.23 0.00 34.92 2.57
102 103 9.720769 TTAGTTAGTTTTTGCTAGCTTGATAGT 57.279 29.630 17.23 3.48 34.92 2.12
103 104 8.622948 AGTTAGTTTTTGCTAGCTTGATAGTT 57.377 30.769 17.23 0.00 30.04 2.24
104 105 8.722394 AGTTAGTTTTTGCTAGCTTGATAGTTC 58.278 33.333 17.23 0.95 30.04 3.01
105 106 8.504005 GTTAGTTTTTGCTAGCTTGATAGTTCA 58.496 33.333 17.23 0.00 0.00 3.18
106 107 7.693969 AGTTTTTGCTAGCTTGATAGTTCAT 57.306 32.000 17.23 0.00 0.00 2.57
107 108 8.115490 AGTTTTTGCTAGCTTGATAGTTCATT 57.885 30.769 17.23 0.00 0.00 2.57
108 109 8.579863 AGTTTTTGCTAGCTTGATAGTTCATTT 58.420 29.630 17.23 0.00 0.00 2.32
109 110 9.196552 GTTTTTGCTAGCTTGATAGTTCATTTT 57.803 29.630 17.23 0.00 0.00 1.82
110 111 8.970691 TTTTGCTAGCTTGATAGTTCATTTTC 57.029 30.769 17.23 0.00 0.00 2.29
111 112 7.928307 TTGCTAGCTTGATAGTTCATTTTCT 57.072 32.000 17.23 0.00 0.00 2.52
112 113 7.928307 TGCTAGCTTGATAGTTCATTTTCTT 57.072 32.000 17.23 0.00 0.00 2.52
113 114 7.978982 TGCTAGCTTGATAGTTCATTTTCTTC 58.021 34.615 17.23 0.00 0.00 2.87
114 115 7.607607 TGCTAGCTTGATAGTTCATTTTCTTCA 59.392 33.333 17.23 0.00 0.00 3.02
115 116 8.454106 GCTAGCTTGATAGTTCATTTTCTTCAA 58.546 33.333 7.70 0.00 0.00 2.69
118 119 8.632679 AGCTTGATAGTTCATTTTCTTCAAACA 58.367 29.630 0.00 0.00 0.00 2.83
119 120 9.248291 GCTTGATAGTTCATTTTCTTCAAACAA 57.752 29.630 0.00 0.00 0.00 2.83
178 179 6.835819 AGTGGACTTTAAAAGGGATTAAGC 57.164 37.500 0.00 0.00 0.00 3.09
179 180 5.414765 AGTGGACTTTAAAAGGGATTAAGCG 59.585 40.000 0.00 0.00 0.00 4.68
180 181 4.703093 TGGACTTTAAAAGGGATTAAGCGG 59.297 41.667 0.00 0.00 0.00 5.52
181 182 4.097437 GGACTTTAAAAGGGATTAAGCGGG 59.903 45.833 0.00 0.00 0.00 6.13
182 183 4.925836 ACTTTAAAAGGGATTAAGCGGGA 58.074 39.130 0.00 0.00 0.00 5.14
183 184 4.703575 ACTTTAAAAGGGATTAAGCGGGAC 59.296 41.667 0.00 0.00 0.00 4.46
184 185 2.139323 AAAAGGGATTAAGCGGGACC 57.861 50.000 0.00 0.00 0.00 4.46
185 186 0.257905 AAAGGGATTAAGCGGGACCC 59.742 55.000 0.00 0.00 40.71 4.46
195 196 2.125269 CGGGACCCGGTTGACATC 60.125 66.667 26.15 0.00 44.15 3.06
196 197 2.271173 GGGACCCGGTTGACATCC 59.729 66.667 0.00 0.00 0.00 3.51
197 198 2.271173 GGACCCGGTTGACATCCC 59.729 66.667 0.00 0.00 0.00 3.85
198 199 2.298661 GGACCCGGTTGACATCCCT 61.299 63.158 0.00 0.00 0.00 4.20
199 200 0.979187 GGACCCGGTTGACATCCCTA 60.979 60.000 0.00 0.00 0.00 3.53
206 207 3.057736 CCGGTTGACATCCCTACTATACG 60.058 52.174 0.00 0.00 0.00 3.06
211 212 4.466827 TGACATCCCTACTATACGCTTGA 58.533 43.478 0.00 0.00 0.00 3.02
226 227 3.627577 ACGCTTGATCCATATGAAACCAC 59.372 43.478 3.65 0.00 0.00 4.16
230 231 5.730568 GCTTGATCCATATGAAACCACGTTC 60.731 44.000 3.65 0.00 0.00 3.95
236 237 4.084537 CCATATGAAACCACGTTCGCTATC 60.085 45.833 3.65 0.00 0.00 2.08
237 238 1.717194 TGAAACCACGTTCGCTATCC 58.283 50.000 0.00 0.00 0.00 2.59
240 241 1.880819 AACCACGTTCGCTATCCGGT 61.881 55.000 0.00 0.00 37.59 5.28
242 243 0.593263 CCACGTTCGCTATCCGGTAC 60.593 60.000 0.00 0.00 37.59 3.34
245 246 1.474077 ACGTTCGCTATCCGGTACTTT 59.526 47.619 0.00 0.00 37.59 2.66
253 254 4.510571 GCTATCCGGTACTTTCCTGAAAA 58.489 43.478 0.00 0.00 0.00 2.29
254 255 8.775891 TCGCTATCCGGTACTTTCCTGAAAAG 62.776 46.154 0.00 0.00 42.75 2.27
265 266 4.823790 TTCCTGAAAAGGAAAGTAACGC 57.176 40.909 4.72 0.00 44.21 4.84
272 273 1.180029 AGGAAAGTAACGCTAGCCGA 58.820 50.000 9.66 0.00 41.02 5.54
276 277 3.001026 GGAAAGTAACGCTAGCCGATTTC 59.999 47.826 9.66 11.96 41.02 2.17
278 279 1.479323 AGTAACGCTAGCCGATTTCCA 59.521 47.619 9.66 0.00 41.02 3.53
282 283 1.670811 ACGCTAGCCGATTTCCAATTG 59.329 47.619 9.66 0.00 41.02 2.32
289 290 5.665916 AGCCGATTTCCAATTGAAAGAAT 57.334 34.783 7.12 1.46 45.74 2.40
296 300 8.025445 CGATTTCCAATTGAAAGAATGAGAGTT 58.975 33.333 7.12 0.00 45.74 3.01
303 307 4.645535 TGAAAGAATGAGAGTTGAGGTGG 58.354 43.478 0.00 0.00 0.00 4.61
309 313 2.357034 GAGTTGAGGTGGCGCGAA 60.357 61.111 12.10 0.00 0.00 4.70
331 335 2.801631 CCGAGGCTGAGATGGGGAC 61.802 68.421 0.00 0.00 0.00 4.46
347 351 1.079127 GACGACCATGGTGTCCCTG 60.079 63.158 25.52 7.18 31.35 4.45
348 352 2.268920 CGACCATGGTGTCCCTGG 59.731 66.667 25.52 8.22 35.99 4.45
352 356 0.475632 ACCATGGTGTCCCTGGAGAA 60.476 55.000 18.99 0.00 34.74 2.87
357 361 0.771755 GGTGTCCCTGGAGAAACCTT 59.228 55.000 14.10 0.00 39.86 3.50
358 362 1.545651 GGTGTCCCTGGAGAAACCTTG 60.546 57.143 14.10 0.00 39.86 3.61
393 397 0.179086 TTGCAGTTGACACGAGAGCA 60.179 50.000 0.00 0.00 0.00 4.26
402 406 2.118513 ACGAGAGCAGTGAGGGGT 59.881 61.111 0.00 0.00 0.00 4.95
409 413 1.220749 GCAGTGAGGGGTTGCGATA 59.779 57.895 0.00 0.00 0.00 2.92
411 415 0.249120 CAGTGAGGGGTTGCGATACA 59.751 55.000 0.00 0.00 0.00 2.29
412 416 0.249398 AGTGAGGGGTTGCGATACAC 59.751 55.000 0.00 0.00 0.00 2.90
413 417 0.036765 GTGAGGGGTTGCGATACACA 60.037 55.000 0.00 0.00 0.00 3.72
415 419 2.112190 TGAGGGGTTGCGATACACATA 58.888 47.619 0.00 0.00 0.00 2.29
418 505 0.859232 GGGTTGCGATACACATAGCG 59.141 55.000 0.00 0.00 43.11 4.26
425 512 3.868661 TGCGATACACATAGCGAAACATT 59.131 39.130 0.00 0.00 42.88 2.71
427 514 4.761745 CGATACACATAGCGAAACATTGG 58.238 43.478 0.00 0.00 42.88 3.16
434 521 1.909700 AGCGAAACATTGGACACCAT 58.090 45.000 0.00 0.00 31.53 3.55
472 559 2.991250 ACCTCATTTCATTCTCCCACG 58.009 47.619 0.00 0.00 0.00 4.94
474 561 1.672881 CTCATTTCATTCTCCCACGCC 59.327 52.381 0.00 0.00 0.00 5.68
490 577 1.008538 GCCGACAAGCAACAACCAG 60.009 57.895 0.00 0.00 0.00 4.00
495 582 1.069049 GACAAGCAACAACCAGCCATT 59.931 47.619 0.00 0.00 0.00 3.16
507 603 0.911769 CAGCCATTGGAGTCCCACTA 59.088 55.000 6.95 0.00 43.41 2.74
519 615 3.744660 AGTCCCACTAGTCTTTGCAAAG 58.255 45.455 29.53 29.53 37.36 2.77
525 621 5.763204 CCCACTAGTCTTTGCAAAGAGTAAA 59.237 40.000 37.69 27.40 45.39 2.01
528 624 8.017946 CCACTAGTCTTTGCAAAGAGTAAATTC 58.982 37.037 37.69 26.54 45.39 2.17
543 639 4.583073 AGTAAATTCTTTTTGCCGGACAGT 59.417 37.500 5.05 0.00 0.00 3.55
554 650 1.714794 CCGGACAGTGCAAAGAGTAG 58.285 55.000 0.00 0.00 0.00 2.57
596 733 5.360714 TGATGCCTTTTTAGTGATTGGGATC 59.639 40.000 0.00 0.00 40.98 3.36
678 844 1.605753 AAGGAAAACTGACGAAGGCC 58.394 50.000 0.00 0.00 0.00 5.19
684 850 1.228657 AACTGACGAAGGCCGAAAGC 61.229 55.000 0.00 0.00 41.76 3.51
742 908 4.838486 CGACGCACGCTCTCTCCC 62.838 72.222 0.00 0.00 34.51 4.30
743 909 4.500116 GACGCACGCTCTCTCCCC 62.500 72.222 0.00 0.00 0.00 4.81
834 1018 2.024414 GTTGCTTCCACTCCACTGTTT 58.976 47.619 0.00 0.00 0.00 2.83
835 1019 1.679139 TGCTTCCACTCCACTGTTTG 58.321 50.000 0.00 0.00 0.00 2.93
836 1020 1.064758 TGCTTCCACTCCACTGTTTGT 60.065 47.619 0.00 0.00 0.00 2.83
838 1022 2.223572 GCTTCCACTCCACTGTTTGTTG 60.224 50.000 0.00 0.00 0.00 3.33
845 1030 3.016736 CTCCACTGTTTGTTGTCCTGTT 58.983 45.455 0.00 0.00 0.00 3.16
846 1031 2.752354 TCCACTGTTTGTTGTCCTGTTG 59.248 45.455 0.00 0.00 0.00 3.33
848 1033 3.181497 CCACTGTTTGTTGTCCTGTTGAG 60.181 47.826 0.00 0.00 0.00 3.02
939 1137 2.279918 CTATAAAGCGCGCCGGGT 60.280 61.111 30.33 14.72 0.00 5.28
985 1183 4.891727 GTCCGCCGCCATCGACAT 62.892 66.667 0.00 0.00 38.10 3.06
986 1184 4.585526 TCCGCCGCCATCGACATC 62.586 66.667 0.00 0.00 38.10 3.06
1029 1242 4.824515 ACCTCCTCCTCGCCCTCG 62.825 72.222 0.00 0.00 0.00 4.63
1135 1353 2.745100 GTTTCCGGCCTCCGTTCC 60.745 66.667 0.00 0.00 46.80 3.62
1265 1532 0.109342 CCTATCCAGATTTGCGGCCT 59.891 55.000 0.00 0.00 0.00 5.19
1275 1542 2.837031 TTTGCGGCCTTGATCCCCTC 62.837 60.000 0.00 0.00 0.00 4.30
1305 1572 2.301346 GGCAAACGGAATCTGATCCAT 58.699 47.619 0.00 0.00 39.61 3.41
1306 1573 2.033801 GGCAAACGGAATCTGATCCATG 59.966 50.000 0.00 0.00 39.61 3.66
1307 1574 2.033801 GCAAACGGAATCTGATCCATGG 59.966 50.000 4.97 4.97 39.61 3.66
1308 1575 3.282021 CAAACGGAATCTGATCCATGGT 58.718 45.455 12.58 0.00 39.61 3.55
1320 1587 2.818751 TCCATGGTGGTGGTTATTCC 57.181 50.000 12.58 0.00 39.03 3.01
1372 1660 1.201429 AGGCTGGGATTCGTCCACTT 61.201 55.000 0.00 0.00 0.00 3.16
1373 1661 1.026718 GGCTGGGATTCGTCCACTTG 61.027 60.000 0.00 0.00 0.00 3.16
1382 1670 2.737376 GTCCACTTGACGCCGTCC 60.737 66.667 15.60 0.00 33.49 4.79
1383 1671 3.228017 TCCACTTGACGCCGTCCA 61.228 61.111 15.60 2.22 0.00 4.02
1384 1672 2.047274 CCACTTGACGCCGTCCAT 60.047 61.111 15.60 0.00 0.00 3.41
1385 1673 1.671054 CCACTTGACGCCGTCCATT 60.671 57.895 15.60 0.00 0.00 3.16
1399 1697 2.584835 TCCATTGAGGAACAAGTGGG 57.415 50.000 0.00 0.00 45.65 4.61
1428 1726 3.535561 TCGATTGGATTTCTCTGCCTTC 58.464 45.455 0.00 0.00 0.00 3.46
1441 1739 2.303890 TCTGCCTTCATGCGATCCATAT 59.696 45.455 0.00 0.00 31.47 1.78
1444 1742 3.261643 TGCCTTCATGCGATCCATATACT 59.738 43.478 0.00 0.00 31.47 2.12
1446 1744 4.825422 CCTTCATGCGATCCATATACTGT 58.175 43.478 0.00 0.00 31.47 3.55
1463 1763 4.946478 ACTGTTATATCCTCTCCTGCAC 57.054 45.455 0.00 0.00 0.00 4.57
1472 1777 5.643421 ATCCTCTCCTGCACTATTTCAAT 57.357 39.130 0.00 0.00 0.00 2.57
1475 1780 4.442052 CCTCTCCTGCACTATTTCAATCGA 60.442 45.833 0.00 0.00 0.00 3.59
1477 1782 5.487433 TCTCCTGCACTATTTCAATCGAAA 58.513 37.500 0.00 0.00 44.99 3.46
1490 1795 7.447374 TTTCAATCGAAATGTGGTAATCTGT 57.553 32.000 0.00 0.00 36.19 3.41
1491 1796 6.421377 TCAATCGAAATGTGGTAATCTGTG 57.579 37.500 0.00 0.00 0.00 3.66
1492 1797 6.169800 TCAATCGAAATGTGGTAATCTGTGA 58.830 36.000 0.00 0.00 0.00 3.58
1493 1798 6.823182 TCAATCGAAATGTGGTAATCTGTGAT 59.177 34.615 0.00 0.00 0.00 3.06
1497 1802 6.823182 TCGAAATGTGGTAATCTGTGATGAAT 59.177 34.615 0.00 0.00 0.00 2.57
1498 1803 6.908820 CGAAATGTGGTAATCTGTGATGAATG 59.091 38.462 0.00 0.00 0.00 2.67
1499 1804 7.414429 CGAAATGTGGTAATCTGTGATGAATGT 60.414 37.037 0.00 0.00 0.00 2.71
1500 1805 8.806429 AAATGTGGTAATCTGTGATGAATGTA 57.194 30.769 0.00 0.00 0.00 2.29
1501 1806 8.985315 AATGTGGTAATCTGTGATGAATGTAT 57.015 30.769 0.00 0.00 0.00 2.29
1503 1808 7.563906 TGTGGTAATCTGTGATGAATGTATCA 58.436 34.615 0.00 0.00 43.67 2.15
1504 1809 8.046107 TGTGGTAATCTGTGATGAATGTATCAA 58.954 33.333 0.00 0.00 42.54 2.57
1505 1810 8.338259 GTGGTAATCTGTGATGAATGTATCAAC 58.662 37.037 0.00 0.00 42.54 3.18
1506 1811 7.498900 TGGTAATCTGTGATGAATGTATCAACC 59.501 37.037 0.00 0.00 42.54 3.77
1507 1812 7.498900 GGTAATCTGTGATGAATGTATCAACCA 59.501 37.037 0.00 0.00 42.54 3.67
1538 1843 9.591792 TCTGTGATGAATTTATCAACTACTCTG 57.408 33.333 13.93 5.85 42.54 3.35
1539 1844 9.376075 CTGTGATGAATTTATCAACTACTCTGT 57.624 33.333 13.93 0.00 42.54 3.41
1559 1885 4.484236 TGTAATTAGTTGCTGCATTGTGC 58.516 39.130 1.84 0.00 45.29 4.57
1576 1904 9.610705 TGCATTGTGCCAAATATATTTAATTGT 57.389 25.926 10.34 0.00 44.23 2.71
1577 1905 9.866936 GCATTGTGCCAAATATATTTAATTGTG 57.133 29.630 10.34 5.84 37.42 3.33
1655 1994 1.525596 CTCGCTCTAACTGTCGTTCG 58.474 55.000 0.00 0.00 34.59 3.95
1677 2018 3.403624 TGGAAGGCCAAGAGCGAT 58.596 55.556 5.01 0.00 42.49 4.58
1685 2026 0.376502 GCCAAGAGCGATTTCTCTGC 59.623 55.000 0.00 0.00 42.25 4.26
1884 2225 5.305644 AGAGTTCTCTAAAGGTCAGCTTTCA 59.694 40.000 4.78 0.00 0.00 2.69
1907 2248 7.297391 TCATTCATGTGTTCGAAACAATAGTG 58.703 34.615 14.24 12.16 44.16 2.74
1911 2252 3.496884 TGTGTTCGAAACAATAGTGCTCC 59.503 43.478 0.00 0.00 44.16 4.70
1940 2281 4.705519 CCGCAGCACAAAAGGGCG 62.706 66.667 0.00 0.00 46.61 6.13
1958 2300 5.797051 AGGGCGTAATGTAACTCTGTTTTA 58.203 37.500 0.00 0.00 0.00 1.52
2113 2533 6.868864 GTGCTGATGAAACTGTCTAAGAGTTA 59.131 38.462 0.00 0.00 33.20 2.24
2146 2567 5.832595 TCCATTTTTGTTTCCAGTGAGATGA 59.167 36.000 0.00 0.00 0.00 2.92
2150 2571 7.873719 TTTTTGTTTCCAGTGAGATGACTTA 57.126 32.000 0.00 0.00 0.00 2.24
2205 2626 9.965902 AGATAACTATTTCAGGTTTTCACTCAT 57.034 29.630 0.00 0.00 0.00 2.90
2209 2630 2.957402 TCAGGTTTTCACTCATGGCT 57.043 45.000 0.00 0.00 0.00 4.75
2212 2633 2.624838 CAGGTTTTCACTCATGGCTTGT 59.375 45.455 0.00 0.00 0.00 3.16
2216 2637 2.189594 TTCACTCATGGCTTGTCCTG 57.810 50.000 0.00 0.00 35.26 3.86
2248 2669 9.817809 TTAAGTTAAGCATTACAGGTAGATCAG 57.182 33.333 0.00 0.00 0.00 2.90
2316 2738 6.557253 AGTTATGGTCATAGTTGGCTGGTATA 59.443 38.462 0.00 0.00 0.00 1.47
2321 2743 6.327887 TGGTCATAGTTGGCTGGTATACATTA 59.672 38.462 5.01 0.00 0.00 1.90
2483 2910 6.345096 AGGATAATTTTGGTGTTTGGTCAG 57.655 37.500 0.00 0.00 0.00 3.51
2661 3088 1.710244 TGTTCACTGGGATCCACCAAT 59.290 47.619 15.23 0.00 40.68 3.16
3302 3740 3.057596 TGTTTGATGGCTTCCGATTTGAC 60.058 43.478 0.00 0.00 0.00 3.18
3635 4076 3.753272 CACATACTTTGACCAACAGGAGG 59.247 47.826 0.00 0.00 0.00 4.30
3650 4091 3.836562 ACAGGAGGTATACGGAAAAGTGT 59.163 43.478 0.00 0.00 0.00 3.55
3700 4141 1.975660 TGTTTTCCCTCCTTTGTCGG 58.024 50.000 0.00 0.00 0.00 4.79
3705 4146 1.052124 TCCCTCCTTTGTCGGTGTGT 61.052 55.000 0.00 0.00 0.00 3.72
3715 4156 1.068474 GTCGGTGTGTGTGAGTATGC 58.932 55.000 0.00 0.00 0.00 3.14
3719 4160 1.871039 GGTGTGTGTGAGTATGCGTTT 59.129 47.619 0.00 0.00 0.00 3.60
3876 4782 5.636903 AGGAAATGTATACTGGCATGTCT 57.363 39.130 4.17 0.00 31.72 3.41
3895 4801 0.466007 TGACTTGCAGCCTGCTTCAA 60.466 50.000 18.96 6.80 45.31 2.69
3896 4802 0.886563 GACTTGCAGCCTGCTTCAAT 59.113 50.000 18.96 0.00 45.31 2.57
3901 4807 1.814394 TGCAGCCTGCTTCAATTACAG 59.186 47.619 18.96 0.00 45.31 2.74
3946 4852 6.908284 TCAAAAGGTTCGATTCGTTTTAAGTG 59.092 34.615 15.66 8.84 33.57 3.16
3952 4858 6.424683 GTTCGATTCGTTTTAAGTGTTCCTT 58.575 36.000 5.89 0.00 37.17 3.36
3961 4867 9.672086 TCGTTTTAAGTGTTCCTTAATTTGATG 57.328 29.630 0.00 0.00 43.42 3.07
4031 4964 5.104735 AGTTCTGGTTAGCCCTTGAAGATAG 60.105 44.000 0.00 0.00 30.80 2.08
4141 5074 6.923508 GTGATGGCTACTTAAATTTTATGGGC 59.076 38.462 0.00 9.07 0.00 5.36
4152 5085 9.883142 CTTAAATTTTATGGGCAATGAGGTAAA 57.117 29.630 0.00 0.00 0.00 2.01
4158 5091 8.830915 TTTATGGGCAATGAGGTAAAATCTAA 57.169 30.769 0.00 0.00 0.00 2.10
4192 5125 9.897744 TCAAAACTTGTTTCTGATCAATATGTC 57.102 29.630 0.00 0.00 0.00 3.06
4193 5126 9.681692 CAAAACTTGTTTCTGATCAATATGTCA 57.318 29.630 0.00 0.00 0.00 3.58
4197 5130 9.683069 ACTTGTTTCTGATCAATATGTCAAAAC 57.317 29.630 0.00 0.00 32.44 2.43
4198 5131 9.903682 CTTGTTTCTGATCAATATGTCAAAACT 57.096 29.630 0.00 0.00 32.70 2.66
4226 5159 4.535526 AAAATAAATCCTTTGCGCAGGT 57.464 36.364 11.31 0.00 35.15 4.00
4229 5162 1.462731 AAATCCTTTGCGCAGGTGCA 61.463 50.000 11.31 2.95 44.61 4.57
4242 5175 3.000825 CGCAGGTGCAAAAAGTTTAAACC 59.999 43.478 14.72 0.00 42.21 3.27
4265 5201 6.099269 ACCTCTGTTTTCTAAGACCAAGTACA 59.901 38.462 0.00 0.00 0.00 2.90
4287 5223 4.895297 CACCCCAGCTATTTCCATGTTATT 59.105 41.667 0.00 0.00 0.00 1.40
4307 5243 7.709182 TGTTATTACGTATCATTTAGCTGTGCT 59.291 33.333 0.00 0.00 43.41 4.40
4312 5248 4.209288 CGTATCATTTAGCTGTGCTGGTAC 59.791 45.833 0.00 0.00 40.10 3.34
4313 5249 2.985896 TCATTTAGCTGTGCTGGTACC 58.014 47.619 4.43 4.43 40.10 3.34
4366 5302 2.106511 AGTGTGGCAGTCTATTGTTGGT 59.893 45.455 0.00 0.00 0.00 3.67
4381 5317 4.993705 TGTTGGTTCCTCTTATTCCAGT 57.006 40.909 0.00 0.00 0.00 4.00
4408 5344 5.010617 ACATATATGCCGACATCACACACTA 59.989 40.000 12.79 0.00 37.74 2.74
4415 5351 4.494690 GCCGACATCACACACTAATGAATG 60.495 45.833 0.00 0.00 0.00 2.67
4421 5357 4.000325 TCACACACTAATGAATGTTCCCG 59.000 43.478 0.00 0.00 0.00 5.14
4426 5362 4.217550 ACACTAATGAATGTTCCCGGTTTG 59.782 41.667 0.00 0.00 0.00 2.93
4474 5412 5.593968 TCTCCATAAATGATGCAAACATGC 58.406 37.500 9.85 0.00 36.35 4.06
4486 5424 6.769341 TGATGCAAACATGCTAGAGATGTTAT 59.231 34.615 16.64 9.73 42.04 1.89
4579 5517 2.400399 CAAATTGCTGCAACCTGACAG 58.600 47.619 18.51 0.00 36.96 3.51
4772 5710 5.203060 ACACTCTTACAGTTTCTGGTCTC 57.797 43.478 1.90 0.00 35.51 3.36
4786 5724 1.004394 TGGTCTCGTAGCTCTCTTGGA 59.996 52.381 0.00 0.00 0.00 3.53
4787 5725 2.303175 GGTCTCGTAGCTCTCTTGGAT 58.697 52.381 0.00 0.00 0.00 3.41
4788 5726 2.292292 GGTCTCGTAGCTCTCTTGGATC 59.708 54.545 0.00 0.00 0.00 3.36
4789 5727 3.211045 GTCTCGTAGCTCTCTTGGATCT 58.789 50.000 0.00 0.00 0.00 2.75
4821 5759 6.151985 TCACTTAGTTCCTTCATCTCTGACTC 59.848 42.308 0.00 0.00 0.00 3.36
4823 5761 6.152661 ACTTAGTTCCTTCATCTCTGACTCTG 59.847 42.308 0.00 0.00 0.00 3.35
4835 5774 4.096532 TCTCTGACTCTGGCTATTTACACG 59.903 45.833 0.00 0.00 0.00 4.49
4837 5776 2.167693 TGACTCTGGCTATTTACACGGG 59.832 50.000 0.00 0.00 0.00 5.28
4869 5809 5.779241 TCTGTGTTGGGATAAATTCTCCT 57.221 39.130 6.90 0.00 33.05 3.69
4954 5894 3.935203 CAGTACGATGACCAAATCTTGCT 59.065 43.478 0.00 0.00 0.00 3.91
4955 5895 5.105513 TCAGTACGATGACCAAATCTTGCTA 60.106 40.000 0.00 0.00 0.00 3.49
5023 5963 8.676401 TGTGCATTACATACATTATCCATATGC 58.324 33.333 0.00 0.00 33.42 3.14
5309 6249 6.183360 CGACATGAATGAGGAAAAGAAGGTAC 60.183 42.308 0.00 0.00 0.00 3.34
5361 6301 5.970317 TGTTGCATCATTTGATTCACTCT 57.030 34.783 0.00 0.00 31.21 3.24
5367 6307 6.317140 TGCATCATTTGATTCACTCTTACTCC 59.683 38.462 0.00 0.00 31.21 3.85
5392 6332 5.220710 AGAATAGCAACTCTGACTTGTGT 57.779 39.130 0.00 0.00 0.00 3.72
5406 6346 6.018588 TCTGACTTGTGTGTTTTATGTTACCG 60.019 38.462 0.00 0.00 0.00 4.02
5517 6458 3.485463 TTTGAACGTGGAGATCTGGTT 57.515 42.857 0.00 0.00 0.00 3.67
5783 6726 7.119699 TCTGTTTTGCACACCTATATTCTTCTG 59.880 37.037 0.00 0.00 0.00 3.02
5788 6731 7.603180 TGCACACCTATATTCTTCTGTAGAT 57.397 36.000 0.00 0.00 31.54 1.98
5809 6752 1.434696 GGCCATCAAGGTTGCATCG 59.565 57.895 0.00 0.00 40.61 3.84
5826 6769 6.000891 TGCATCGGATAATCTTATTTGCAC 57.999 37.500 0.00 0.00 0.00 4.57
5845 6788 2.228103 CACTGTTGATCTGTGCTGCATT 59.772 45.455 5.27 0.00 38.68 3.56
5867 6810 2.332654 GGTGGCCCATGACAACGAC 61.333 63.158 0.00 0.00 0.00 4.34
5957 6900 1.584724 AAATCCTGTCTCCATCCCGT 58.415 50.000 0.00 0.00 0.00 5.28
5986 6929 8.029782 TGTGTGGTAATGCTAATTACTAGGAT 57.970 34.615 8.15 0.00 45.11 3.24
6041 6987 0.592247 CGCAGCACAACCTCACAAAC 60.592 55.000 0.00 0.00 0.00 2.93
6096 7042 1.471829 AAAGCGGAAAAGCCCAAGGG 61.472 55.000 0.00 0.00 38.01 3.95
6151 7097 2.738643 CGGGTACATCGATGTTGAAGCT 60.739 50.000 34.06 11.73 41.97 3.74
6156 7102 4.456280 ACATCGATGTTGAAGCTACTCA 57.544 40.909 25.18 0.00 37.90 3.41
6197 7143 0.832135 TGAGGCGACTTCTGGTTCCT 60.832 55.000 0.00 0.00 44.43 3.36
6254 7200 4.042435 AGGGAATTAACTTTGTCTTCCGGA 59.958 41.667 0.00 0.00 36.95 5.14
6341 7288 6.647067 CCTTGTAATACTCCTGCTATTGCTAC 59.353 42.308 0.00 0.00 40.48 3.58
6375 7322 2.677836 TGTCAAACTGTGCAGACTTGAC 59.322 45.455 26.08 26.08 44.82 3.18
6458 7405 0.592148 CGGGTCGAGTCCAGCTATAC 59.408 60.000 5.69 0.00 0.00 1.47
6480 7427 1.966762 CCAAATATGCGCCATCCCC 59.033 57.895 4.18 0.00 0.00 4.81
6506 7453 7.359598 CGAGTCCTCTGTCATAAAGAAAGTTTG 60.360 40.741 0.00 0.00 33.01 2.93
6512 7459 4.280677 TGTCATAAAGAAAGTTTGGGGCTG 59.719 41.667 0.00 0.00 0.00 4.85
6635 7582 1.378531 TTGCTAATAACTGCAGGGCG 58.621 50.000 19.93 1.11 40.46 6.13
6642 7589 2.489938 TAACTGCAGGGCGAAGAAAT 57.510 45.000 19.93 0.00 0.00 2.17
6644 7591 0.036732 ACTGCAGGGCGAAGAAATCA 59.963 50.000 19.93 0.00 0.00 2.57
6652 7599 3.817647 AGGGCGAAGAAATCATAGATTGC 59.182 43.478 0.00 0.00 0.00 3.56
6655 7602 4.274459 GGCGAAGAAATCATAGATTGCACT 59.726 41.667 0.91 0.00 0.00 4.40
6656 7603 5.466728 GGCGAAGAAATCATAGATTGCACTA 59.533 40.000 0.91 0.00 0.00 2.74
6657 7604 6.358762 GCGAAGAAATCATAGATTGCACTAC 58.641 40.000 0.91 0.00 0.00 2.73
6712 7660 3.304057 GCTTCACTCCTTGTTTCCTTTCG 60.304 47.826 0.00 0.00 0.00 3.46
6749 7698 3.819245 TGGCACACAAAGGTAAGCT 57.181 47.368 0.00 0.00 0.00 3.74
6753 7705 2.683362 GGCACACAAAGGTAAGCTATCC 59.317 50.000 0.00 0.00 0.00 2.59
6775 7727 5.193527 TCCTATCATGTCCCAAAATTCTCCA 59.806 40.000 0.00 0.00 0.00 3.86
6787 7739 7.071071 TCCCAAAATTCTCCAGTTGAAAGAAAT 59.929 33.333 0.00 0.00 33.10 2.17
6788 7740 8.367156 CCCAAAATTCTCCAGTTGAAAGAAATA 58.633 33.333 0.00 0.00 33.10 1.40
6789 7741 9.933723 CCAAAATTCTCCAGTTGAAAGAAATAT 57.066 29.630 0.00 0.00 33.10 1.28
6796 7748 9.618890 TCTCCAGTTGAAAGAAATATTATCCAG 57.381 33.333 0.00 0.00 0.00 3.86
6812 7764 3.569194 TCCAGCACTAACTTGTTCCAA 57.431 42.857 0.00 0.00 0.00 3.53
6813 7765 3.211045 TCCAGCACTAACTTGTTCCAAC 58.789 45.455 0.00 0.00 0.00 3.77
6814 7766 2.948979 CCAGCACTAACTTGTTCCAACA 59.051 45.455 0.00 0.00 37.08 3.33
6816 7768 3.003689 CAGCACTAACTTGTTCCAACAGG 59.996 47.826 0.26 0.26 40.50 4.00
6818 7770 3.003378 GCACTAACTTGTTCCAACAGGTC 59.997 47.826 7.58 0.00 46.75 3.85
6819 7771 4.451900 CACTAACTTGTTCCAACAGGTCT 58.548 43.478 7.58 2.39 46.75 3.85
6821 7773 4.881850 ACTAACTTGTTCCAACAGGTCTTG 59.118 41.667 7.58 4.51 46.75 3.02
6822 7774 3.366052 ACTTGTTCCAACAGGTCTTGT 57.634 42.857 1.54 0.00 44.64 3.16
6849 7801 1.247567 CAACCAAAAGGCGACCATCT 58.752 50.000 0.00 0.00 0.00 2.90
6888 7840 1.913262 ACTGACCATCGAGGCCACA 60.913 57.895 5.01 0.00 43.14 4.17
6938 7890 2.767505 ACTTGGACCGCTTCAAAGTAG 58.232 47.619 3.67 0.00 45.49 2.57
6968 7920 1.478288 CCATGGCCATCTTCTTCCTCC 60.478 57.143 17.61 0.00 0.00 4.30
6969 7921 1.493871 CATGGCCATCTTCTTCCTCCT 59.506 52.381 17.61 0.00 0.00 3.69
6971 7923 0.472044 GGCCATCTTCTTCCTCCTCC 59.528 60.000 0.00 0.00 0.00 4.30
6972 7924 0.105778 GCCATCTTCTTCCTCCTCCG 59.894 60.000 0.00 0.00 0.00 4.63
6973 7925 0.105778 CCATCTTCTTCCTCCTCCGC 59.894 60.000 0.00 0.00 0.00 5.54
6974 7926 1.118838 CATCTTCTTCCTCCTCCGCT 58.881 55.000 0.00 0.00 0.00 5.52
6975 7927 1.118838 ATCTTCTTCCTCCTCCGCTG 58.881 55.000 0.00 0.00 0.00 5.18
7016 7968 2.974698 GAGTGGCTGCACTGCGTT 60.975 61.111 0.50 0.00 35.23 4.84
7017 7969 2.516930 AGTGGCTGCACTGCGTTT 60.517 55.556 0.50 0.00 33.58 3.60
7059 8011 1.687612 CAGGGGCATGGACTTGACT 59.312 57.895 0.00 0.00 0.00 3.41
7074 8026 0.749049 TGACTGGCCGAGATGAGATG 59.251 55.000 8.91 0.00 0.00 2.90
7086 8038 2.037620 ATGAGATGGACAGCGGCCTC 62.038 60.000 0.00 0.00 0.00 4.70
7105 8057 2.360191 GCAGGATGGCAGGGGAAA 59.640 61.111 0.00 0.00 35.86 3.13
7106 8058 2.054453 GCAGGATGGCAGGGGAAAC 61.054 63.158 0.00 0.00 35.86 2.78
7107 8059 1.750399 CAGGATGGCAGGGGAAACG 60.750 63.158 0.00 0.00 0.00 3.60
7108 8060 2.440247 GGATGGCAGGGGAAACGG 60.440 66.667 0.00 0.00 0.00 4.44
7109 8061 3.140814 GATGGCAGGGGAAACGGC 61.141 66.667 0.00 0.00 0.00 5.68
7110 8062 3.645268 GATGGCAGGGGAAACGGCT 62.645 63.158 0.00 0.00 0.00 5.52
7111 8063 3.645268 ATGGCAGGGGAAACGGCTC 62.645 63.158 0.00 0.00 0.00 4.70
7118 8070 4.388499 GGAAACGGCTCGGCAGGA 62.388 66.667 0.00 0.00 0.00 3.86
7119 8071 2.125106 GAAACGGCTCGGCAGGAT 60.125 61.111 0.00 0.00 0.00 3.24
7120 8072 2.436646 AAACGGCTCGGCAGGATG 60.437 61.111 0.00 0.00 40.87 3.51
7121 8073 3.976701 AAACGGCTCGGCAGGATGG 62.977 63.158 0.00 0.00 35.86 3.51
7194 8179 3.240069 CCTTTCTTGATTTTCAGCAGCG 58.760 45.455 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.930726 TTGGGTTGGGTTGGAGTTCT 59.069 50.000 0.00 0.00 0.00 3.01
1 2 1.037493 GTTGGGTTGGGTTGGAGTTC 58.963 55.000 0.00 0.00 0.00 3.01
2 3 0.397957 GGTTGGGTTGGGTTGGAGTT 60.398 55.000 0.00 0.00 0.00 3.01
3 4 1.231928 GGTTGGGTTGGGTTGGAGT 59.768 57.895 0.00 0.00 0.00 3.85
4 5 1.112916 GTGGTTGGGTTGGGTTGGAG 61.113 60.000 0.00 0.00 0.00 3.86
5 6 1.075896 GTGGTTGGGTTGGGTTGGA 60.076 57.895 0.00 0.00 0.00 3.53
6 7 0.762461 ATGTGGTTGGGTTGGGTTGG 60.762 55.000 0.00 0.00 0.00 3.77
7 8 0.392336 CATGTGGTTGGGTTGGGTTG 59.608 55.000 0.00 0.00 0.00 3.77
8 9 1.406860 GCATGTGGTTGGGTTGGGTT 61.407 55.000 0.00 0.00 0.00 4.11
9 10 1.836604 GCATGTGGTTGGGTTGGGT 60.837 57.895 0.00 0.00 0.00 4.51
10 11 0.251564 TAGCATGTGGTTGGGTTGGG 60.252 55.000 0.00 0.00 0.00 4.12
11 12 1.851304 ATAGCATGTGGTTGGGTTGG 58.149 50.000 0.00 0.00 0.00 3.77
12 13 2.354510 CGTATAGCATGTGGTTGGGTTG 59.645 50.000 0.00 0.00 0.00 3.77
13 14 2.639065 CGTATAGCATGTGGTTGGGTT 58.361 47.619 0.00 0.00 0.00 4.11
14 15 1.134220 CCGTATAGCATGTGGTTGGGT 60.134 52.381 0.00 0.00 0.00 4.51
15 16 1.134220 ACCGTATAGCATGTGGTTGGG 60.134 52.381 0.00 0.00 0.00 4.12
16 17 2.325583 ACCGTATAGCATGTGGTTGG 57.674 50.000 0.00 0.00 0.00 3.77
17 18 3.390135 CCTACCGTATAGCATGTGGTTG 58.610 50.000 0.00 0.00 34.18 3.77
18 19 2.367567 CCCTACCGTATAGCATGTGGTT 59.632 50.000 0.00 0.00 34.18 3.67
19 20 1.968493 CCCTACCGTATAGCATGTGGT 59.032 52.381 0.00 0.00 36.72 4.16
20 21 2.244695 TCCCTACCGTATAGCATGTGG 58.755 52.381 0.00 0.00 0.00 4.17
21 22 3.258372 ACATCCCTACCGTATAGCATGTG 59.742 47.826 0.00 0.00 0.00 3.21
22 23 3.507411 ACATCCCTACCGTATAGCATGT 58.493 45.455 0.00 0.00 0.00 3.21
23 24 5.185249 ACTTACATCCCTACCGTATAGCATG 59.815 44.000 0.00 0.00 0.00 4.06
24 25 5.185249 CACTTACATCCCTACCGTATAGCAT 59.815 44.000 0.00 0.00 0.00 3.79
25 26 4.521639 CACTTACATCCCTACCGTATAGCA 59.478 45.833 0.00 0.00 0.00 3.49
26 27 4.082354 CCACTTACATCCCTACCGTATAGC 60.082 50.000 0.00 0.00 0.00 2.97
27 28 4.082354 GCCACTTACATCCCTACCGTATAG 60.082 50.000 0.00 0.00 0.00 1.31
28 29 3.828451 GCCACTTACATCCCTACCGTATA 59.172 47.826 0.00 0.00 0.00 1.47
29 30 2.631545 GCCACTTACATCCCTACCGTAT 59.368 50.000 0.00 0.00 0.00 3.06
30 31 2.034124 GCCACTTACATCCCTACCGTA 58.966 52.381 0.00 0.00 0.00 4.02
31 32 0.828677 GCCACTTACATCCCTACCGT 59.171 55.000 0.00 0.00 0.00 4.83
32 33 0.828022 TGCCACTTACATCCCTACCG 59.172 55.000 0.00 0.00 0.00 4.02
33 34 3.359695 TTTGCCACTTACATCCCTACC 57.640 47.619 0.00 0.00 0.00 3.18
34 35 7.425606 CATTTATTTGCCACTTACATCCCTAC 58.574 38.462 0.00 0.00 0.00 3.18
35 36 6.549364 CCATTTATTTGCCACTTACATCCCTA 59.451 38.462 0.00 0.00 0.00 3.53
36 37 5.363580 CCATTTATTTGCCACTTACATCCCT 59.636 40.000 0.00 0.00 0.00 4.20
37 38 5.600696 CCATTTATTTGCCACTTACATCCC 58.399 41.667 0.00 0.00 0.00 3.85
38 39 5.049828 GCCATTTATTTGCCACTTACATCC 58.950 41.667 0.00 0.00 0.00 3.51
39 40 4.739716 CGCCATTTATTTGCCACTTACATC 59.260 41.667 0.00 0.00 0.00 3.06
40 41 4.159506 ACGCCATTTATTTGCCACTTACAT 59.840 37.500 0.00 0.00 0.00 2.29
41 42 3.508012 ACGCCATTTATTTGCCACTTACA 59.492 39.130 0.00 0.00 0.00 2.41
42 43 4.102649 GACGCCATTTATTTGCCACTTAC 58.897 43.478 0.00 0.00 0.00 2.34
43 44 3.129638 GGACGCCATTTATTTGCCACTTA 59.870 43.478 0.00 0.00 0.00 2.24
44 45 2.094234 GGACGCCATTTATTTGCCACTT 60.094 45.455 0.00 0.00 0.00 3.16
45 46 1.476488 GGACGCCATTTATTTGCCACT 59.524 47.619 0.00 0.00 0.00 4.00
46 47 1.797348 CGGACGCCATTTATTTGCCAC 60.797 52.381 0.00 0.00 0.00 5.01
47 48 0.453793 CGGACGCCATTTATTTGCCA 59.546 50.000 0.00 0.00 0.00 4.92
48 49 0.869880 GCGGACGCCATTTATTTGCC 60.870 55.000 5.20 0.00 34.56 4.52
49 50 0.179150 TGCGGACGCCATTTATTTGC 60.179 50.000 14.61 0.00 41.09 3.68
50 51 2.270275 TTGCGGACGCCATTTATTTG 57.730 45.000 14.61 0.00 41.09 2.32
51 52 2.223711 GGATTGCGGACGCCATTTATTT 60.224 45.455 14.61 0.00 41.09 1.40
52 53 1.336755 GGATTGCGGACGCCATTTATT 59.663 47.619 14.61 0.00 41.09 1.40
53 54 0.951558 GGATTGCGGACGCCATTTAT 59.048 50.000 14.61 0.18 41.09 1.40
54 55 1.098712 GGGATTGCGGACGCCATTTA 61.099 55.000 14.61 0.00 41.09 1.40
55 56 2.414785 GGGATTGCGGACGCCATTT 61.415 57.895 14.61 0.00 41.09 2.32
56 57 2.828549 GGGATTGCGGACGCCATT 60.829 61.111 14.61 0.00 41.09 3.16
60 61 2.032185 CTAAACGGGATTGCGGACGC 62.032 60.000 10.13 10.13 42.35 5.19
61 62 0.738412 ACTAAACGGGATTGCGGACG 60.738 55.000 0.00 0.00 0.00 4.79
62 63 1.445871 AACTAAACGGGATTGCGGAC 58.554 50.000 0.00 0.00 0.00 4.79
63 64 2.234414 ACTAACTAAACGGGATTGCGGA 59.766 45.455 0.00 0.00 0.00 5.54
64 65 2.624636 ACTAACTAAACGGGATTGCGG 58.375 47.619 0.00 0.00 0.00 5.69
65 66 4.673534 AAACTAACTAAACGGGATTGCG 57.326 40.909 0.00 0.00 0.00 4.85
66 67 5.118050 GCAAAAACTAACTAAACGGGATTGC 59.882 40.000 0.00 0.00 0.00 3.56
67 68 6.443792 AGCAAAAACTAACTAAACGGGATTG 58.556 36.000 0.00 0.00 0.00 2.67
68 69 6.644248 AGCAAAAACTAACTAAACGGGATT 57.356 33.333 0.00 0.00 0.00 3.01
69 70 6.128090 GCTAGCAAAAACTAACTAAACGGGAT 60.128 38.462 10.63 0.00 0.00 3.85
70 71 5.179929 GCTAGCAAAAACTAACTAAACGGGA 59.820 40.000 10.63 0.00 0.00 5.14
71 72 5.180680 AGCTAGCAAAAACTAACTAAACGGG 59.819 40.000 18.83 0.00 0.00 5.28
72 73 6.237313 AGCTAGCAAAAACTAACTAAACGG 57.763 37.500 18.83 0.00 0.00 4.44
73 74 7.349711 TCAAGCTAGCAAAAACTAACTAAACG 58.650 34.615 18.83 0.00 0.00 3.60
76 77 9.720769 ACTATCAAGCTAGCAAAAACTAACTAA 57.279 29.630 18.83 0.00 0.00 2.24
77 78 9.720769 AACTATCAAGCTAGCAAAAACTAACTA 57.279 29.630 18.83 0.00 0.00 2.24
78 79 8.622948 AACTATCAAGCTAGCAAAAACTAACT 57.377 30.769 18.83 0.00 0.00 2.24
79 80 8.504005 TGAACTATCAAGCTAGCAAAAACTAAC 58.496 33.333 18.83 2.68 30.99 2.34
80 81 8.615878 TGAACTATCAAGCTAGCAAAAACTAA 57.384 30.769 18.83 0.00 30.99 2.24
81 82 8.792830 ATGAACTATCAAGCTAGCAAAAACTA 57.207 30.769 18.83 0.00 39.49 2.24
82 83 7.693969 ATGAACTATCAAGCTAGCAAAAACT 57.306 32.000 18.83 0.00 39.49 2.66
83 84 8.748380 AAATGAACTATCAAGCTAGCAAAAAC 57.252 30.769 18.83 0.00 39.49 2.43
84 85 9.410556 GAAAATGAACTATCAAGCTAGCAAAAA 57.589 29.630 18.83 0.00 39.49 1.94
85 86 8.796475 AGAAAATGAACTATCAAGCTAGCAAAA 58.204 29.630 18.83 1.00 39.49 2.44
86 87 8.340618 AGAAAATGAACTATCAAGCTAGCAAA 57.659 30.769 18.83 1.41 39.49 3.68
87 88 7.928307 AGAAAATGAACTATCAAGCTAGCAA 57.072 32.000 18.83 1.82 39.49 3.91
88 89 7.607607 TGAAGAAAATGAACTATCAAGCTAGCA 59.392 33.333 18.83 0.00 39.49 3.49
89 90 7.978982 TGAAGAAAATGAACTATCAAGCTAGC 58.021 34.615 6.62 6.62 39.49 3.42
92 93 8.632679 TGTTTGAAGAAAATGAACTATCAAGCT 58.367 29.630 0.00 0.00 39.49 3.74
93 94 8.801715 TGTTTGAAGAAAATGAACTATCAAGC 57.198 30.769 0.00 0.00 39.49 4.01
152 153 8.967918 GCTTAATCCCTTTTAAAGTCCACTTAT 58.032 33.333 3.91 0.00 34.61 1.73
153 154 7.120138 CGCTTAATCCCTTTTAAAGTCCACTTA 59.880 37.037 3.91 0.00 34.61 2.24
154 155 6.072119 CGCTTAATCCCTTTTAAAGTCCACTT 60.072 38.462 3.91 0.00 37.91 3.16
155 156 5.414765 CGCTTAATCCCTTTTAAAGTCCACT 59.585 40.000 3.91 0.00 0.00 4.00
156 157 5.392703 CCGCTTAATCCCTTTTAAAGTCCAC 60.393 44.000 3.91 0.00 0.00 4.02
157 158 4.703093 CCGCTTAATCCCTTTTAAAGTCCA 59.297 41.667 3.91 0.00 0.00 4.02
158 159 4.097437 CCCGCTTAATCCCTTTTAAAGTCC 59.903 45.833 3.91 0.00 0.00 3.85
159 160 4.945543 TCCCGCTTAATCCCTTTTAAAGTC 59.054 41.667 3.91 0.00 0.00 3.01
160 161 4.703575 GTCCCGCTTAATCCCTTTTAAAGT 59.296 41.667 3.91 0.00 0.00 2.66
161 162 4.097437 GGTCCCGCTTAATCCCTTTTAAAG 59.903 45.833 0.00 0.00 0.00 1.85
162 163 4.018490 GGTCCCGCTTAATCCCTTTTAAA 58.982 43.478 0.00 0.00 0.00 1.52
163 164 3.623703 GGTCCCGCTTAATCCCTTTTAA 58.376 45.455 0.00 0.00 0.00 1.52
164 165 2.092267 GGGTCCCGCTTAATCCCTTTTA 60.092 50.000 0.00 0.00 35.63 1.52
165 166 1.341679 GGGTCCCGCTTAATCCCTTTT 60.342 52.381 0.00 0.00 35.63 2.27
166 167 0.257905 GGGTCCCGCTTAATCCCTTT 59.742 55.000 0.00 0.00 35.63 3.11
167 168 1.920532 GGGTCCCGCTTAATCCCTT 59.079 57.895 0.00 0.00 35.63 3.95
168 169 2.440817 CGGGTCCCGCTTAATCCCT 61.441 63.158 19.48 0.00 41.17 4.20
169 170 2.110420 CGGGTCCCGCTTAATCCC 59.890 66.667 19.48 0.00 41.17 3.85
170 171 2.110420 CCGGGTCCCGCTTAATCC 59.890 66.667 25.88 0.00 46.86 3.01
171 172 1.093496 CAACCGGGTCCCGCTTAATC 61.093 60.000 25.88 0.00 46.86 1.75
172 173 1.078001 CAACCGGGTCCCGCTTAAT 60.078 57.895 25.88 5.28 46.86 1.40
173 174 2.215625 TCAACCGGGTCCCGCTTAA 61.216 57.895 25.88 0.00 46.86 1.85
174 175 2.604079 TCAACCGGGTCCCGCTTA 60.604 61.111 25.88 6.78 46.86 3.09
175 176 4.324991 GTCAACCGGGTCCCGCTT 62.325 66.667 25.88 15.43 46.86 4.68
177 178 4.404098 ATGTCAACCGGGTCCCGC 62.404 66.667 25.88 11.38 46.86 6.13
179 180 2.271173 GGATGTCAACCGGGTCCC 59.729 66.667 6.32 0.00 0.00 4.46
180 181 0.979187 TAGGGATGTCAACCGGGTCC 60.979 60.000 6.32 0.00 0.00 4.46
181 182 0.177373 GTAGGGATGTCAACCGGGTC 59.823 60.000 6.32 0.00 0.00 4.46
182 183 0.252558 AGTAGGGATGTCAACCGGGT 60.253 55.000 6.32 0.00 0.00 5.28
183 184 1.784358 TAGTAGGGATGTCAACCGGG 58.216 55.000 6.32 0.00 0.00 5.73
184 185 3.057736 CGTATAGTAGGGATGTCAACCGG 60.058 52.174 0.00 0.00 0.00 5.28
185 186 3.611057 GCGTATAGTAGGGATGTCAACCG 60.611 52.174 0.00 0.00 0.00 4.44
186 187 3.573110 AGCGTATAGTAGGGATGTCAACC 59.427 47.826 0.00 0.00 0.00 3.77
187 188 4.850347 AGCGTATAGTAGGGATGTCAAC 57.150 45.455 0.00 0.00 0.00 3.18
188 189 4.891168 TCAAGCGTATAGTAGGGATGTCAA 59.109 41.667 0.00 0.00 0.00 3.18
189 190 4.466827 TCAAGCGTATAGTAGGGATGTCA 58.533 43.478 0.00 0.00 0.00 3.58
190 191 5.393243 GGATCAAGCGTATAGTAGGGATGTC 60.393 48.000 0.00 0.00 0.00 3.06
191 192 4.463186 GGATCAAGCGTATAGTAGGGATGT 59.537 45.833 0.00 0.00 0.00 3.06
192 193 4.462834 TGGATCAAGCGTATAGTAGGGATG 59.537 45.833 0.00 0.00 0.00 3.51
193 194 4.673968 TGGATCAAGCGTATAGTAGGGAT 58.326 43.478 0.00 0.00 0.00 3.85
194 195 4.108501 TGGATCAAGCGTATAGTAGGGA 57.891 45.455 0.00 0.00 0.00 4.20
195 196 6.321435 TCATATGGATCAAGCGTATAGTAGGG 59.679 42.308 2.13 0.00 0.00 3.53
196 197 7.334844 TCATATGGATCAAGCGTATAGTAGG 57.665 40.000 2.13 0.00 0.00 3.18
197 198 9.077674 GTTTCATATGGATCAAGCGTATAGTAG 57.922 37.037 2.13 0.00 0.00 2.57
198 199 8.033038 GGTTTCATATGGATCAAGCGTATAGTA 58.967 37.037 2.13 0.00 0.00 1.82
199 200 6.874134 GGTTTCATATGGATCAAGCGTATAGT 59.126 38.462 2.13 0.00 0.00 2.12
206 207 3.627577 ACGTGGTTTCATATGGATCAAGC 59.372 43.478 2.13 2.15 0.00 4.01
211 212 2.612212 GCGAACGTGGTTTCATATGGAT 59.388 45.455 2.13 0.00 0.00 3.41
226 227 2.114825 GAAAGTACCGGATAGCGAACG 58.885 52.381 9.46 0.00 0.00 3.95
230 231 1.679680 TCAGGAAAGTACCGGATAGCG 59.320 52.381 9.46 0.00 34.73 4.26
253 254 1.180029 TCGGCTAGCGTTACTTTCCT 58.820 50.000 9.00 0.00 0.00 3.36
254 255 2.220479 ATCGGCTAGCGTTACTTTCC 57.780 50.000 9.00 0.00 0.00 3.13
263 264 1.939934 TCAATTGGAAATCGGCTAGCG 59.060 47.619 9.00 4.38 0.00 4.26
265 266 5.818136 TCTTTCAATTGGAAATCGGCTAG 57.182 39.130 5.42 0.00 44.18 3.42
272 273 8.863086 TCAACTCTCATTCTTTCAATTGGAAAT 58.137 29.630 5.42 0.00 44.18 2.17
276 277 6.208204 ACCTCAACTCTCATTCTTTCAATTGG 59.792 38.462 5.42 0.00 0.00 3.16
278 279 6.208204 CCACCTCAACTCTCATTCTTTCAATT 59.792 38.462 0.00 0.00 0.00 2.32
282 283 3.438434 GCCACCTCAACTCTCATTCTTTC 59.562 47.826 0.00 0.00 0.00 2.62
289 290 2.343758 GCGCCACCTCAACTCTCA 59.656 61.111 0.00 0.00 0.00 3.27
296 300 4.742201 GAGCTTCGCGCCACCTCA 62.742 66.667 0.00 0.00 40.39 3.86
309 313 2.132996 CCATCTCAGCCTCGGAGCT 61.133 63.158 0.00 0.00 46.45 4.09
313 317 2.444706 TCCCCATCTCAGCCTCGG 60.445 66.667 0.00 0.00 0.00 4.63
317 321 2.501610 GTCGTCCCCATCTCAGCC 59.498 66.667 0.00 0.00 0.00 4.85
331 335 2.244117 CTCCAGGGACACCATGGTCG 62.244 65.000 16.53 13.35 38.70 4.79
337 341 0.401395 AGGTTTCTCCAGGGACACCA 60.401 55.000 5.67 0.00 38.22 4.17
338 342 0.771755 AAGGTTTCTCCAGGGACACC 59.228 55.000 0.00 0.00 36.59 4.16
339 343 1.897560 CAAGGTTTCTCCAGGGACAC 58.102 55.000 0.00 0.00 39.02 3.67
340 344 0.110486 GCAAGGTTTCTCCAGGGACA 59.890 55.000 0.00 0.00 39.02 4.02
347 351 0.253327 ATCTCCGGCAAGGTTTCTCC 59.747 55.000 0.00 0.00 41.99 3.71
348 352 1.373570 CATCTCCGGCAAGGTTTCTC 58.626 55.000 0.00 0.00 41.99 2.87
352 356 2.677228 CCCATCTCCGGCAAGGTT 59.323 61.111 0.00 0.00 41.99 3.50
357 361 2.000701 AATGTCCCCATCTCCGGCA 61.001 57.895 0.00 0.00 0.00 5.69
358 362 1.526917 CAATGTCCCCATCTCCGGC 60.527 63.158 0.00 0.00 0.00 6.13
393 397 0.249398 GTGTATCGCAACCCCTCACT 59.751 55.000 0.00 0.00 0.00 3.41
402 406 3.254892 TGTTTCGCTATGTGTATCGCAA 58.745 40.909 0.00 0.00 0.00 4.85
409 413 3.188460 GTGTCCAATGTTTCGCTATGTGT 59.812 43.478 0.00 0.00 0.00 3.72
411 415 2.747446 GGTGTCCAATGTTTCGCTATGT 59.253 45.455 0.00 0.00 0.00 2.29
412 416 2.746904 TGGTGTCCAATGTTTCGCTATG 59.253 45.455 0.00 0.00 0.00 2.23
413 417 3.066291 TGGTGTCCAATGTTTCGCTAT 57.934 42.857 0.00 0.00 0.00 2.97
415 419 1.909700 ATGGTGTCCAATGTTTCGCT 58.090 45.000 0.00 0.00 36.95 4.93
439 526 1.568504 ATGAGGTTTCTGTAGGGCGA 58.431 50.000 0.00 0.00 0.00 5.54
440 527 2.403252 AATGAGGTTTCTGTAGGGCG 57.597 50.000 0.00 0.00 0.00 6.13
448 535 5.012893 GTGGGAGAATGAAATGAGGTTTCT 58.987 41.667 2.67 0.00 45.22 2.52
449 536 4.142600 CGTGGGAGAATGAAATGAGGTTTC 60.143 45.833 0.00 0.00 45.21 2.78
466 553 4.243008 TTGCTTGTCGGCGTGGGA 62.243 61.111 6.85 0.00 34.52 4.37
472 559 1.008538 CTGGTTGTTGCTTGTCGGC 60.009 57.895 0.00 0.00 0.00 5.54
474 561 1.008538 GGCTGGTTGTTGCTTGTCG 60.009 57.895 0.00 0.00 0.00 4.35
490 577 0.912486 ACTAGTGGGACTCCAATGGC 59.088 55.000 0.00 0.00 46.04 4.40
495 582 1.623811 GCAAAGACTAGTGGGACTCCA 59.376 52.381 0.00 0.00 41.58 3.86
497 584 3.402628 TTGCAAAGACTAGTGGGACTC 57.597 47.619 0.00 0.00 0.00 3.36
504 600 8.910351 AGAATTTACTCTTTGCAAAGACTAGT 57.090 30.769 32.86 29.11 39.95 2.57
507 603 9.875691 AAAAAGAATTTACTCTTTGCAAAGACT 57.124 25.926 32.86 26.09 43.33 3.24
519 615 5.116069 TGTCCGGCAAAAAGAATTTACTC 57.884 39.130 0.00 0.00 37.28 2.59
525 621 1.000274 GCACTGTCCGGCAAAAAGAAT 60.000 47.619 0.00 0.00 0.00 2.40
528 624 0.102120 TTGCACTGTCCGGCAAAAAG 59.898 50.000 0.00 0.00 46.11 2.27
536 632 2.440539 ACTACTCTTTGCACTGTCCG 57.559 50.000 0.00 0.00 0.00 4.79
543 639 8.445275 TCACAAAAGAAATACTACTCTTTGCA 57.555 30.769 0.00 0.00 40.23 4.08
554 650 7.147976 AGGCATCACTTTCACAAAAGAAATAC 58.852 34.615 4.99 0.00 43.90 1.89
573 710 5.595952 AGATCCCAATCACTAAAAAGGCATC 59.404 40.000 0.00 0.00 34.07 3.91
633 798 0.383949 GCCTTCGCTGGTTTTGTGAA 59.616 50.000 0.00 0.00 33.61 3.18
634 799 0.465460 AGCCTTCGCTGGTTTTGTGA 60.465 50.000 0.00 0.00 46.19 3.58
661 827 0.601841 TCGGCCTTCGTCAGTTTTCC 60.602 55.000 0.00 0.00 40.32 3.13
834 1018 0.249868 CCGCTCTCAACAGGACAACA 60.250 55.000 0.00 0.00 0.00 3.33
835 1019 1.569479 GCCGCTCTCAACAGGACAAC 61.569 60.000 0.00 0.00 0.00 3.32
836 1020 1.301716 GCCGCTCTCAACAGGACAA 60.302 57.895 0.00 0.00 0.00 3.18
838 1022 2.435059 GGCCGCTCTCAACAGGAC 60.435 66.667 0.00 0.00 0.00 3.85
913 1111 3.354645 GCTTTATAGCGGCCGGCC 61.355 66.667 36.69 36.69 45.17 6.13
1179 1434 4.170062 CGCTCAGCCGCACATTGG 62.170 66.667 0.00 0.00 0.00 3.16
1265 1532 1.602237 GGCGACAAGAGGGGATCAA 59.398 57.895 0.00 0.00 0.00 2.57
1275 1542 4.383602 CGTTTGCCCGGCGACAAG 62.384 66.667 9.30 0.00 0.00 3.16
1332 1606 7.436673 CAGCCTCAAGTTTATTAGCAGTAGTAG 59.563 40.741 0.00 0.00 0.00 2.57
1340 1614 3.886123 TCCCAGCCTCAAGTTTATTAGC 58.114 45.455 0.00 0.00 0.00 3.09
1372 1660 1.822114 TTCCTCAATGGACGGCGTCA 61.822 55.000 37.13 24.67 46.14 4.35
1373 1661 1.079405 TTCCTCAATGGACGGCGTC 60.079 57.895 30.72 30.72 46.14 5.19
1376 1664 0.804989 CTTGTTCCTCAATGGACGGC 59.195 55.000 0.00 0.00 46.14 5.68
1381 1669 1.888512 CACCCACTTGTTCCTCAATGG 59.111 52.381 0.00 0.00 35.35 3.16
1382 1670 2.294233 CACACCCACTTGTTCCTCAATG 59.706 50.000 0.00 0.00 35.35 2.82
1383 1671 2.174639 TCACACCCACTTGTTCCTCAAT 59.825 45.455 0.00 0.00 35.35 2.57
1384 1672 1.562008 TCACACCCACTTGTTCCTCAA 59.438 47.619 0.00 0.00 34.61 3.02
1385 1673 1.208706 TCACACCCACTTGTTCCTCA 58.791 50.000 0.00 0.00 0.00 3.86
1399 1697 6.253746 CAGAGAAATCCAATCGAAATCACAC 58.746 40.000 0.00 0.00 0.00 3.82
1428 1726 8.363390 AGGATATAACAGTATATGGATCGCATG 58.637 37.037 6.87 0.00 33.77 4.06
1441 1739 5.706447 AGTGCAGGAGAGGATATAACAGTA 58.294 41.667 0.00 0.00 0.00 2.74
1444 1742 7.290014 TGAAATAGTGCAGGAGAGGATATAACA 59.710 37.037 0.00 0.00 0.00 2.41
1446 1744 7.855784 TGAAATAGTGCAGGAGAGGATATAA 57.144 36.000 0.00 0.00 0.00 0.98
1472 1777 5.729510 TCATCACAGATTACCACATTTCGA 58.270 37.500 0.00 0.00 0.00 3.71
1475 1780 7.707624 ACATTCATCACAGATTACCACATTT 57.292 32.000 0.00 0.00 0.00 2.32
1477 1782 8.212995 TGATACATTCATCACAGATTACCACAT 58.787 33.333 0.00 0.00 29.93 3.21
1479 1784 8.338259 GTTGATACATTCATCACAGATTACCAC 58.662 37.037 0.00 0.00 34.69 4.16
1480 1785 7.498900 GGTTGATACATTCATCACAGATTACCA 59.501 37.037 0.00 0.00 34.69 3.25
1481 1786 7.498900 TGGTTGATACATTCATCACAGATTACC 59.501 37.037 0.00 0.00 34.69 2.85
1485 1790 9.631257 TTATTGGTTGATACATTCATCACAGAT 57.369 29.630 0.00 0.00 34.69 2.90
1486 1791 9.631257 ATTATTGGTTGATACATTCATCACAGA 57.369 29.630 0.00 0.00 34.69 3.41
1488 1793 9.631257 AGATTATTGGTTGATACATTCATCACA 57.369 29.630 0.00 0.00 34.69 3.58
1489 1794 9.888878 CAGATTATTGGTTGATACATTCATCAC 57.111 33.333 0.00 0.00 34.69 3.06
1490 1795 9.631257 ACAGATTATTGGTTGATACATTCATCA 57.369 29.630 0.00 0.00 33.34 3.07
1491 1796 9.888878 CACAGATTATTGGTTGATACATTCATC 57.111 33.333 0.00 0.00 33.34 2.92
1492 1797 9.631257 TCACAGATTATTGGTTGATACATTCAT 57.369 29.630 0.00 0.00 33.34 2.57
1493 1798 9.631257 ATCACAGATTATTGGTTGATACATTCA 57.369 29.630 0.00 0.00 0.00 2.57
1497 1802 9.631257 ATTCATCACAGATTATTGGTTGATACA 57.369 29.630 0.00 0.00 0.00 2.29
1532 1837 6.878923 ACAATGCAGCAACTAATTACAGAGTA 59.121 34.615 0.00 0.00 0.00 2.59
1534 1839 6.025896 CACAATGCAGCAACTAATTACAGAG 58.974 40.000 0.00 0.00 0.00 3.35
1536 1841 4.560035 GCACAATGCAGCAACTAATTACAG 59.440 41.667 0.00 0.00 44.26 2.74
1537 1842 4.484236 GCACAATGCAGCAACTAATTACA 58.516 39.130 0.00 0.00 44.26 2.41
1655 1994 1.401905 CGCTCTTGGCCTTCCATAAAC 59.598 52.381 3.32 0.00 43.05 2.01
1675 2016 1.205893 AGACACGGGAGCAGAGAAATC 59.794 52.381 0.00 0.00 0.00 2.17
1677 2018 0.318441 CAGACACGGGAGCAGAGAAA 59.682 55.000 0.00 0.00 0.00 2.52
1884 2225 6.072508 AGCACTATTGTTTCGAACACATGAAT 60.073 34.615 0.00 0.25 41.97 2.57
1907 2248 3.119096 GGACGCCACGAAAGGAGC 61.119 66.667 0.00 0.00 30.84 4.70
1911 2252 3.777925 CTGCGGACGCCACGAAAG 61.778 66.667 14.61 0.00 41.09 2.62
1958 2300 5.191722 TGATCCCAAACTTCAAGTAGCCTAT 59.808 40.000 0.00 0.00 0.00 2.57
2113 2533 8.704668 ACTGGAAACAAAAATGGAAAATACTCT 58.295 29.630 0.00 0.00 42.06 3.24
2131 2551 7.913674 AAAGATAAGTCATCTCACTGGAAAC 57.086 36.000 0.00 0.00 43.56 2.78
2184 2605 5.183904 GCCATGAGTGAAAACCTGAAATAGT 59.816 40.000 0.00 0.00 0.00 2.12
2187 2608 4.154942 AGCCATGAGTGAAAACCTGAAAT 58.845 39.130 0.00 0.00 0.00 2.17
2193 2614 2.029918 GGACAAGCCATGAGTGAAAACC 60.030 50.000 0.00 0.00 36.34 3.27
2201 2622 0.322277 AGCACAGGACAAGCCATGAG 60.322 55.000 0.00 0.00 40.02 2.90
2205 2626 0.472044 TAACAGCACAGGACAAGCCA 59.528 50.000 0.00 0.00 40.02 4.75
2209 2630 4.274950 GCTTAACTTAACAGCACAGGACAA 59.725 41.667 0.00 0.00 33.45 3.18
2212 2633 4.079980 TGCTTAACTTAACAGCACAGGA 57.920 40.909 0.00 0.00 38.65 3.86
2216 2637 6.072673 ACCTGTAATGCTTAACTTAACAGCAC 60.073 38.462 0.00 0.00 46.09 4.40
2235 2656 1.613925 GCGCATCCTGATCTACCTGTA 59.386 52.381 0.30 0.00 0.00 2.74
2248 2669 5.473931 TCATATTTTCTCTCTAGCGCATCC 58.526 41.667 11.47 0.00 0.00 3.51
2289 2711 5.369699 ACCAGCCAACTATGACCATAACTAT 59.630 40.000 0.00 0.00 0.00 2.12
2483 2910 3.382546 CCATTGACATGGGAAATCCTGAC 59.617 47.826 0.00 0.00 45.99 3.51
3053 3491 2.032030 CAGAACACGCAACCCTAAACTG 60.032 50.000 0.00 0.00 0.00 3.16
3302 3740 2.859165 ATAGCATGGATGTTACCCCG 57.141 50.000 0.00 0.00 0.00 5.73
3635 4076 7.744715 GCATATGCAATACACTTTTCCGTATAC 59.255 37.037 22.84 0.00 41.59 1.47
3650 4091 3.775261 TGGCTCTCAGCATATGCAATA 57.225 42.857 28.62 12.68 44.75 1.90
3700 4141 3.602390 AAAACGCATACTCACACACAC 57.398 42.857 0.00 0.00 0.00 3.82
3728 4169 1.668826 TCTTAGAACAGTGCCCCCAT 58.331 50.000 0.00 0.00 0.00 4.00
3775 4216 5.627780 CGTGAAAATTAACTACCAGGCAAAC 59.372 40.000 0.00 0.00 0.00 2.93
3876 4782 0.466007 TTGAAGCAGGCTGCAAGTCA 60.466 50.000 38.09 31.58 44.82 3.41
3895 4801 3.181497 GCAATGCCACGATCAACTGTAAT 60.181 43.478 0.00 0.00 0.00 1.89
3896 4802 2.161410 GCAATGCCACGATCAACTGTAA 59.839 45.455 0.00 0.00 0.00 2.41
3901 4807 0.523072 AGTGCAATGCCACGATCAAC 59.477 50.000 1.53 0.00 40.59 3.18
3992 4925 5.506708 ACCAGAACTTTGAGTAAACCAACT 58.493 37.500 0.00 0.00 0.00 3.16
3997 4930 5.048921 GGGCTAACCAGAACTTTGAGTAAAC 60.049 44.000 0.00 0.00 39.85 2.01
4006 4939 3.394606 TCTTCAAGGGCTAACCAGAACTT 59.605 43.478 0.00 0.00 43.89 2.66
4031 4964 1.681264 CCAAAAGGGACTGGAACACAC 59.319 52.381 0.00 0.00 40.86 3.82
4204 5137 4.690280 CACCTGCGCAAAGGATTTATTTTT 59.310 37.500 21.44 0.00 40.02 1.94
4209 5142 0.525761 GCACCTGCGCAAAGGATTTA 59.474 50.000 21.44 0.00 40.02 1.40
4220 5153 3.000825 GGTTTAAACTTTTTGCACCTGCG 59.999 43.478 17.50 0.00 45.83 5.18
4226 5159 7.875554 AGAAAACAGAGGTTTAAACTTTTTGCA 59.124 29.630 17.50 0.00 46.20 4.08
4242 5175 6.424207 GGTGTACTTGGTCTTAGAAAACAGAG 59.576 42.308 0.00 0.00 0.00 3.35
4265 5201 4.814224 ATAACATGGAAATAGCTGGGGT 57.186 40.909 0.00 0.00 0.00 4.95
4287 5223 4.142026 ACCAGCACAGCTAAATGATACGTA 60.142 41.667 0.00 0.00 36.40 3.57
4340 5276 6.071952 CCAACAATAGACTGCCACACTAAAAT 60.072 38.462 0.00 0.00 0.00 1.82
4347 5283 2.949177 ACCAACAATAGACTGCCACA 57.051 45.000 0.00 0.00 0.00 4.17
4381 5317 6.201997 GTGTGTGATGTCGGCATATATGTAAA 59.798 38.462 14.14 0.00 35.07 2.01
4408 5344 4.586841 TCTTTCAAACCGGGAACATTCATT 59.413 37.500 6.32 0.00 0.00 2.57
4415 5351 7.956420 AAATAAAATCTTTCAAACCGGGAAC 57.044 32.000 6.32 0.00 0.00 3.62
4486 5424 7.907389 ACATGAGTAGGTTAAGAAAGACATGA 58.093 34.615 0.00 0.00 36.37 3.07
4579 5517 7.892803 ACGAGTTAGAAAACAGATATAAACGC 58.107 34.615 0.00 0.00 38.12 4.84
4712 5650 5.196341 TGTATCGTAGGTGATCAATGTCC 57.804 43.478 0.00 0.00 0.00 4.02
4753 5691 4.506886 ACGAGACCAGAAACTGTAAGAG 57.493 45.455 0.00 0.00 37.43 2.85
4772 5710 4.109050 GTCAAAGATCCAAGAGAGCTACG 58.891 47.826 0.00 0.00 41.49 3.51
4786 5724 6.043243 TGAAGGAACTAAGTGAGGTCAAAGAT 59.957 38.462 0.00 0.00 44.60 2.40
4787 5725 5.365605 TGAAGGAACTAAGTGAGGTCAAAGA 59.634 40.000 0.00 0.00 44.60 2.52
4788 5726 5.611374 TGAAGGAACTAAGTGAGGTCAAAG 58.389 41.667 0.00 0.00 44.60 2.77
4789 5727 5.623956 TGAAGGAACTAAGTGAGGTCAAA 57.376 39.130 0.00 0.00 44.60 2.69
4821 5759 2.285977 GAACCCCGTGTAAATAGCCAG 58.714 52.381 0.00 0.00 0.00 4.85
4823 5761 1.065272 TGGAACCCCGTGTAAATAGCC 60.065 52.381 0.00 0.00 34.29 3.93
4835 5774 1.681264 CAACACAGAAGTTGGAACCCC 59.319 52.381 0.00 0.00 43.89 4.95
4998 5938 8.676401 TGCATATGGATAATGTATGTAATGCAC 58.324 33.333 4.56 0.00 43.20 4.57
5023 5963 5.943706 TGGGAAAATGCAATGTCAATTTG 57.056 34.783 0.00 0.00 0.00 2.32
5309 6249 7.064728 GCCCTGACTAAAGATTGTGTAGTTAAG 59.935 40.741 0.00 0.00 0.00 1.85
5317 6257 3.679389 ACTGCCCTGACTAAAGATTGTG 58.321 45.455 0.00 0.00 0.00 3.33
5323 6263 2.030805 GCAACAACTGCCCTGACTAAAG 60.031 50.000 0.00 0.00 46.13 1.85
5361 6301 7.616150 AGTCAGAGTTGCTATTCTTAGGAGTAA 59.384 37.037 0.00 0.00 0.00 2.24
5367 6307 6.870965 ACACAAGTCAGAGTTGCTATTCTTAG 59.129 38.462 16.75 0.85 31.85 2.18
5392 6332 7.317842 TCAACTTGTTCGGTAACATAAAACA 57.682 32.000 0.00 0.00 44.85 2.83
5406 6346 5.668558 ACAGATACGGTTTCAACTTGTTC 57.331 39.130 1.53 0.00 0.00 3.18
5517 6458 5.534654 ACTGGGATGAAAATTGAAGACGAAA 59.465 36.000 0.00 0.00 0.00 3.46
5788 6731 2.283821 GCAACCTTGATGGCCCCA 60.284 61.111 0.00 0.00 40.22 4.96
5809 6752 8.844244 AGATCAACAGTGCAAATAAGATTATCC 58.156 33.333 0.00 0.00 0.00 2.59
5826 6769 2.863739 CAATGCAGCACAGATCAACAG 58.136 47.619 0.00 0.00 0.00 3.16
5845 6788 3.144121 TTGTCATGGGCCACCTGCA 62.144 57.895 9.28 4.23 43.89 4.41
5867 6810 1.284982 CTTCAGGCGACGTGAAGTGG 61.285 60.000 22.67 8.67 44.00 4.00
5879 6822 0.827368 CTCCTGGTACTCCTTCAGGC 59.173 60.000 9.55 0.00 45.58 4.85
5957 6900 9.811995 CTAGTAATTAGCATTACCACACAAGTA 57.188 33.333 3.89 0.00 44.23 2.24
6041 6987 0.251354 TAAGCCTGGCAAGAGAGCAG 59.749 55.000 22.65 0.00 35.83 4.24
6096 7042 1.163554 CCAAGAAGCAGCTCCTTCAC 58.836 55.000 19.47 0.00 42.84 3.18
6197 7143 2.232941 CACCTCCTGTAGACGCCTTTTA 59.767 50.000 0.00 0.00 0.00 1.52
6254 7200 5.735070 GCTTATTTGTTGTCTTTGTCGGGTT 60.735 40.000 0.00 0.00 0.00 4.11
6341 7288 6.183360 GCACAGTTTGACAGTATTGCTACTAG 60.183 42.308 0.00 0.00 35.99 2.57
6375 7322 1.891150 AGCAAAGTCCAAGCCAGAATG 59.109 47.619 0.00 0.00 0.00 2.67
6458 7405 0.661187 GATGGCGCATATTTGGCACG 60.661 55.000 10.83 0.00 43.86 5.34
6480 7427 5.715070 ACTTTCTTTATGACAGAGGACTCG 58.285 41.667 0.00 0.00 34.09 4.18
6512 7459 5.221244 ACAACTGTTTTTATTCTGGGCTGAC 60.221 40.000 0.00 0.00 0.00 3.51
6583 7530 6.546484 ACAATCCAGGCTTATAGCAATATGT 58.454 36.000 0.67 0.00 44.75 2.29
6635 7582 8.443953 AAGGTAGTGCAATCTATGATTTCTTC 57.556 34.615 0.00 0.00 0.00 2.87
6642 7589 7.144722 CACAAAAAGGTAGTGCAATCTATGA 57.855 36.000 0.00 0.00 0.00 2.15
6652 7599 6.801862 GCAGTTATTAGCACAAAAAGGTAGTG 59.198 38.462 0.00 0.00 36.39 2.74
6655 7602 6.488683 ACTGCAGTTATTAGCACAAAAAGGTA 59.511 34.615 15.25 0.00 36.62 3.08
6656 7603 5.301805 ACTGCAGTTATTAGCACAAAAAGGT 59.698 36.000 15.25 0.00 36.62 3.50
6657 7604 5.630680 CACTGCAGTTATTAGCACAAAAAGG 59.369 40.000 18.94 0.00 36.62 3.11
6696 7644 3.495001 GTCTCACGAAAGGAAACAAGGAG 59.505 47.826 0.00 0.00 0.00 3.69
6749 7698 7.073598 TGGAGAATTTTGGGACATGATAGGATA 59.926 37.037 0.00 0.00 39.30 2.59
6753 7705 6.125029 ACTGGAGAATTTTGGGACATGATAG 58.875 40.000 0.00 0.00 39.30 2.08
6775 7727 8.814038 AGTGCTGGATAATATTTCTTTCAACT 57.186 30.769 0.00 0.00 0.00 3.16
6787 7739 6.953101 TGGAACAAGTTAGTGCTGGATAATA 58.047 36.000 0.00 0.00 31.92 0.98
6788 7740 5.815581 TGGAACAAGTTAGTGCTGGATAAT 58.184 37.500 0.00 0.00 31.92 1.28
6789 7741 5.235850 TGGAACAAGTTAGTGCTGGATAA 57.764 39.130 0.00 0.00 31.92 1.75
6790 7742 4.901197 TGGAACAAGTTAGTGCTGGATA 57.099 40.909 0.00 0.00 31.92 2.59
6791 7743 3.788227 TGGAACAAGTTAGTGCTGGAT 57.212 42.857 0.00 0.00 31.92 3.41
6812 7764 0.033601 TGTGGGCAAACAAGACCTGT 60.034 50.000 0.00 0.00 41.27 4.00
6813 7765 1.110442 TTGTGGGCAAACAAGACCTG 58.890 50.000 1.29 0.00 37.66 4.00
6814 7766 1.111277 GTTGTGGGCAAACAAGACCT 58.889 50.000 5.35 0.00 40.60 3.85
6816 7768 3.659850 GGTTGTGGGCAAACAAGAC 57.340 52.632 5.35 0.00 41.72 3.01
6821 7773 1.662517 CCTTTTGGTTGTGGGCAAAC 58.337 50.000 0.00 0.00 42.42 2.93
6822 7774 0.107459 GCCTTTTGGTTGTGGGCAAA 60.107 50.000 0.00 0.00 42.08 3.68
6823 7775 1.524482 GCCTTTTGGTTGTGGGCAA 59.476 52.632 0.00 0.00 42.08 4.52
6825 7777 2.028925 CGCCTTTTGGTTGTGGGC 59.971 61.111 0.00 0.00 42.99 5.36
6826 7778 1.362355 GTCGCCTTTTGGTTGTGGG 59.638 57.895 0.00 0.00 42.99 4.61
6849 7801 0.525455 CCGTGAGCGATGATGACGAA 60.525 55.000 0.00 0.00 41.33 3.85
6888 7840 1.376424 CGCACTTCTCATGCCCACT 60.376 57.895 0.00 0.00 40.09 4.00
6928 7880 1.727213 GCAGCTTGCGCTACTTTGAAG 60.727 52.381 9.73 2.60 46.99 3.02
6973 7925 4.705519 CCACGGGCGCAAAAGCAG 62.706 66.667 10.83 0.00 39.27 4.24
6975 7927 4.999939 CACCACGGGCGCAAAAGC 63.000 66.667 10.83 0.00 0.00 3.51
7017 7969 2.360483 TCGCTTCTGTTCATGCCAAAAA 59.640 40.909 0.00 0.00 0.00 1.94
7059 8011 0.687427 TGTCCATCTCATCTCGGCCA 60.687 55.000 2.24 0.00 0.00 5.36
7090 8042 2.677228 CGTTTCCCCTGCCATCCT 59.323 61.111 0.00 0.00 0.00 3.24
7101 8053 3.682292 ATCCTGCCGAGCCGTTTCC 62.682 63.158 0.00 0.00 0.00 3.13
7102 8054 2.125106 ATCCTGCCGAGCCGTTTC 60.125 61.111 0.00 0.00 0.00 2.78
7103 8055 2.436646 CATCCTGCCGAGCCGTTT 60.437 61.111 0.00 0.00 0.00 3.60
7104 8056 4.473520 CCATCCTGCCGAGCCGTT 62.474 66.667 0.00 0.00 0.00 4.44
7109 8061 4.559063 CCCTGCCATCCTGCCGAG 62.559 72.222 0.00 0.00 0.00 4.63
7112 8064 3.301222 TTTCCCCTGCCATCCTGCC 62.301 63.158 0.00 0.00 0.00 4.85
7113 8065 2.054453 GTTTCCCCTGCCATCCTGC 61.054 63.158 0.00 0.00 0.00 4.85
7114 8066 1.750399 CGTTTCCCCTGCCATCCTG 60.750 63.158 0.00 0.00 0.00 3.86
7115 8067 2.677228 CGTTTCCCCTGCCATCCT 59.323 61.111 0.00 0.00 0.00 3.24
7116 8068 2.440247 CCGTTTCCCCTGCCATCC 60.440 66.667 0.00 0.00 0.00 3.51
7117 8069 1.749258 GACCGTTTCCCCTGCCATC 60.749 63.158 0.00 0.00 0.00 3.51
7118 8070 0.912487 TAGACCGTTTCCCCTGCCAT 60.912 55.000 0.00 0.00 0.00 4.40
7119 8071 1.536907 TAGACCGTTTCCCCTGCCA 60.537 57.895 0.00 0.00 0.00 4.92
7120 8072 1.221021 CTAGACCGTTTCCCCTGCC 59.779 63.158 0.00 0.00 0.00 4.85
7121 8073 0.831307 ATCTAGACCGTTTCCCCTGC 59.169 55.000 0.00 0.00 0.00 4.85
7166 8151 1.545841 AAATCAAGAAAGGGACGCCC 58.454 50.000 6.80 6.80 45.90 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.