AutoCloner

Multiple sequence alignment - TraesCS7B01G470300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7B01G470300	chr7B	100.000	2705	0	0	1	2705	726611110	726613814	0.000000e+00	4996.0
1	TraesCS7B01G470300	chr7B	84.761	899	128	7	825	1718	726754619	726755513	0.000000e+00	893.0
2	TraesCS7B01G470300	chr7B	83.445	894	127	7	825	1709	726887694	726886813	0.000000e+00	811.0
3	TraesCS7B01G470300	chr7B	82.742	846	138	7	877	1719	726697166	726698006	0.000000e+00	747.0
4	TraesCS7B01G470300	chr7B	94.444	396	8	2	2323	2704	6560270	6560665	4.980000e-167	597.0
5	TraesCS7B01G470300	chr7B	93.717	382	20	3	2326	2704	747670936	747670556	1.090000e-158	569.0
6	TraesCS7B01G470300	chr7B	93.352	361	22	2	1	360	151621031	151621390	1.430000e-147	532.0
7	TraesCS7B01G470300	chr7B	92.615	325	20	4	1877	2200	11666496	11666175	5.280000e-127	464.0
8	TraesCS7B01G470300	chr7B	94.007	267	15	1	425	691	151620974	151621239	1.170000e-108	403.0
9	TraesCS7B01G470300	chr7B	86.957	322	42	0	825	1146	726748518	726748839	1.980000e-96	363.0
10	TraesCS7B01G470300	chr7B	96.825	63	2	0	1785	1847	726302873	726302935	3.680000e-19	106.0
11	TraesCS7B01G470300	chr7B	90.541	74	7	0	1710	1783	667453313	667453386	6.160000e-17	99.0
12	TraesCS7B01G470300	chr7B	92.727	55	3	1	1665	1718	726923904	726923850	8.030000e-11	78.7
13	TraesCS7B01G470300	chr7A	87.695	1024	94	11	718	1721	722019356	722020367	0.000000e+00	1164.0
14	TraesCS7B01G470300	chr7A	84.530	905	127	6	825	1719	722128074	722128975	0.000000e+00	883.0
15	TraesCS7B01G470300	chr7A	88.514	148	6	7	2180	2325	722021366	722021504	4.630000e-38	169.0
16	TraesCS7B01G470300	chr7A	94.898	98	5	0	1784	1881	722020366	722020463	1.300000e-33	154.0
17	TraesCS7B01G470300	chr7A	92.857	70	5	0	1713	1782	205174993	205175062	4.760000e-18	102.0
18	TraesCS7B01G470300	chr7D	84.753	951	121	11	777	1709	626438377	626439321	0.000000e+00	931.0
19	TraesCS7B01G470300	chr7D	83.186	904	139	6	825	1718	626597966	626597066	0.000000e+00	815.0
20	TraesCS7B01G470300	chr7D	92.500	360	27	0	1	360	102993701	102994060	1.440000e-142	516.0
21	TraesCS7B01G470300	chr7D	90.659	364	30	3	1	363	329108781	329109141	5.240000e-132	481.0
22	TraesCS7B01G470300	chr7D	87.293	362	37	8	3	360	566464221	566463865	3.240000e-109	405.0
23	TraesCS7B01G470300	chr7D	93.182	264	18	0	427	690	102993646	102993909	3.270000e-104	388.0
24	TraesCS7B01G470300	chr7D	91.440	257	21	1	435	691	329108734	329108989	4.290000e-93	351.0
25	TraesCS7B01G470300	chr7D	86.316	190	17	8	318	499	45132611	45132423	5.910000e-47	198.0
26	TraesCS7B01G470300	chr7D	92.157	102	5	1	1781	1879	626439323	626439424	1.010000e-29	141.0
27	TraesCS7B01G470300	chr7D	91.089	101	4	3	2162	2260	626439850	626439947	6.080000e-27	132.0
28	TraesCS7B01G470300	chr7D	96.875	64	2	0	1719	1782	423587104	423587167	1.020000e-19	108.0
29	TraesCS7B01G470300	chr7D	96.825	63	2	0	1720	1782	195626183	195626121	3.680000e-19	106.0
30	TraesCS7B01G470300	chr7D	85.294	102	5	6	1781	1875	626755160	626755062	2.220000e-16	97.1
31	TraesCS7B01G470300	chr5D	92.913	381	24	3	2326	2704	490551058	490550679	3.940000e-153	551.0
32	TraesCS7B01G470300	chr5D	90.608	362	31	3	1	360	319621892	319621532	6.780000e-131	477.0
33	TraesCS7B01G470300	chr5D	87.812	361	40	3	1	360	1721104	1721461	1.160000e-113	420.0
34	TraesCS7B01G470300	chr5D	92.164	268	19	2	425	691	319621949	319621683	7.070000e-101	377.0
35	TraesCS7B01G470300	chr5D	89.513	267	26	1	425	691	1721047	1721311	1.200000e-88	337.0
36	TraesCS7B01G470300	chr5D	84.290	331	44	7	361	691	278350103	278350425	1.560000e-82	316.0
37	TraesCS7B01G470300	chr5D	84.539	304	43	4	361	664	278438640	278438939	5.660000e-77	298.0
38	TraesCS7B01G470300	chr5D	83.105	219	28	8	2	219	278350224	278350434	9.890000e-45	191.0
39	TraesCS7B01G470300	chr5D	96.825	63	2	0	1720	1782	122203930	122203992	3.680000e-19	106.0
40	TraesCS7B01G470300	chr5D	96.774	62	2	0	1721	1782	509426555	509426494	1.320000e-18	104.0
41	TraesCS7B01G470300	chr5D	95.238	63	3	0	1720	1782	310705351	310705289	1.710000e-17	100.0
42	TraesCS7B01G470300	chr4D	92.838	377	25	2	2324	2699	450890482	450890107	1.830000e-151	545.0
43	TraesCS7B01G470300	chr4D	92.308	377	27	2	2325	2700	495585846	495585471	3.960000e-148	534.0
44	TraesCS7B01G470300	chr4D	95.161	186	9	0	471	656	365394607	365394422	7.320000e-76	294.0
45	TraesCS7B01G470300	chr4D	93.367	196	13	0	461	656	365394431	365394236	9.470000e-75	291.0
46	TraesCS7B01G470300	chr4D	88.571	210	22	2	435	643	309942133	309941925	1.240000e-63	254.0
47	TraesCS7B01G470300	chr4D	90.566	159	5	7	318	468	329665960	329665804	4.570000e-48	202.0
48	TraesCS7B01G470300	chr4D	95.238	126	5	1	353	477	485381480	485381605	5.910000e-47	198.0
49	TraesCS7B01G470300	chr4D	82.805	221	26	5	442	661	113157438	113157229	1.280000e-43	187.0
50	TraesCS7B01G470300	chr4D	92.754	69	4	1	1721	1788	14609597	14609665	6.160000e-17	99.0
51	TraesCS7B01G470300	chr4D	95.161	62	3	0	1721	1782	245478338	245478399	6.160000e-17	99.0
52	TraesCS7B01G470300	chr4D	95.161	62	3	0	1721	1782	282080032	282079971	6.160000e-17	99.0
53	TraesCS7B01G470300	chr4D	92.537	67	4	1	1716	1782	298526782	298526847	7.970000e-16	95.3
54	TraesCS7B01G470300	chr6D	92.126	381	28	2	2325	2704	27012631	27013010	1.100000e-148	536.0
55	TraesCS7B01G470300	chr6D	92.532	308	22	1	383	690	14229962	14230268	8.890000e-120	440.0
56	TraesCS7B01G470300	chr6D	92.509	267	20	0	425	691	14229688	14229954	1.520000e-102	383.0
57	TraesCS7B01G470300	chr6D	94.359	195	11	0	166	360	18165023	18165217	1.570000e-77	300.0
58	TraesCS7B01G470300	chr6D	91.284	218	19	0	1	218	14229745	14229962	5.660000e-77	298.0
59	TraesCS7B01G470300	chr6D	90.196	204	19	1	3	206	14230063	14230265	5.740000e-67	265.0
60	TraesCS7B01G470300	chr6D	89.744	156	13	3	526	679	102984162	102984316	2.120000e-46	196.0
61	TraesCS7B01G470300	chr6D	94.444	126	5	2	353	477	273973803	273973927	2.750000e-45	193.0
62	TraesCS7B01G470300	chr6D	93.651	126	6	2	353	477	273966195	273966319	1.280000e-43	187.0
63	TraesCS7B01G470300	chr6D	93.651	126	6	2	353	477	458198835	458198959	1.280000e-43	187.0
64	TraesCS7B01G470300	chr6D	93.651	126	6	2	353	477	458222346	458222470	1.280000e-43	187.0
65	TraesCS7B01G470300	chr6D	93.651	126	6	2	353	477	458229208	458229332	1.280000e-43	187.0
66	TraesCS7B01G470300	chr6D	93.651	126	6	2	353	477	458263200	458263324	1.280000e-43	187.0
67	TraesCS7B01G470300	chr6D	88.387	155	12	5	353	502	414926916	414926763	5.950000e-42	182.0
68	TraesCS7B01G470300	chr6D	89.706	136	13	1	45	179	102984162	102984297	3.580000e-39	172.0
69	TraesCS7B01G470300	chr6D	94.203	69	4	0	1714	1782	199210419	199210351	3.680000e-19	106.0
70	TraesCS7B01G470300	chr6D	94.030	67	4	0	1720	1786	114156705	114156771	4.760000e-18	102.0
71	TraesCS7B01G470300	chr6D	95.312	64	3	0	1719	1782	437774048	437774111	4.760000e-18	102.0
72	TraesCS7B01G470300	chr6D	95.238	63	2	1	1721	1782	462439582	462439520	6.160000e-17	99.0
73	TraesCS7B01G470300	chr6D	95.161	62	2	1	1721	1782	1551883	1551823	2.220000e-16	97.1
74	TraesCS7B01G470300	chr6D	91.304	69	6	0	1714	1782	299191354	299191286	7.970000e-16	95.3
75	TraesCS7B01G470300	chr6D	88.889	72	7	1	594	664	55437235	55437164	1.330000e-13	87.9
76	TraesCS7B01G470300	chr4A	92.147	382	27	3	2325	2704	148159083	148159463	1.100000e-148	536.0
77	TraesCS7B01G470300	chr4A	90.000	360	34	2	1	360	716968428	716968071	5.280000e-127	464.0
78	TraesCS7B01G470300	chr4A	90.335	269	25	1	423	691	716968487	716968220	4.290000e-93	351.0
79	TraesCS7B01G470300	chr3A	91.906	383	27	4	2324	2704	665231005	665230625	1.430000e-147	532.0
80	TraesCS7B01G470300	chr3A	91.358	81	4	2	1704	1782	710277866	710277945	1.020000e-19	108.0
81	TraesCS7B01G470300	chr5B	91.688	385	24	6	2326	2704	655024482	655024864	6.630000e-146	527.0
82	TraesCS7B01G470300	chr5B	94.463	307	16	1	353	659	137655828	137656133	3.150000e-129	472.0
83	TraesCS7B01G470300	chr5B	87.829	304	34	3	361	664	316528952	316529252	1.190000e-93	353.0
84	TraesCS7B01G470300	chr3D	93.056	360	25	0	1	360	449755030	449755389	6.630000e-146	527.0
85	TraesCS7B01G470300	chr3D	94.796	269	14	0	423	691	449754971	449755239	1.160000e-113	420.0
86	TraesCS7B01G470300	chr3D	94.416	197	11	0	164	360	179355741	179355545	1.220000e-78	303.0
87	TraesCS7B01G470300	chr3D	94.416	197	11	0	164	360	333504522	333504718	1.220000e-78	303.0
88	TraesCS7B01G470300	chr3D	87.243	243	27	3	120	360	553334992	553335232	9.540000e-70	274.0
89	TraesCS7B01G470300	chr3D	95.238	147	6	1	353	499	449755276	449755421	5.820000e-57	231.0
90	TraesCS7B01G470300	chr3D	96.032	126	3	2	353	477	92747717	92747841	1.270000e-48	204.0
91	TraesCS7B01G470300	chr3D	88.623	167	12	5	352	512	586365269	586365104	2.120000e-46	196.0
92	TraesCS7B01G470300	chr3D	78.846	312	44	17	44	340	175442942	175443246	9.890000e-45	191.0
93	TraesCS7B01G470300	chr3D	96.774	62	2	0	1721	1782	371366825	371366886	1.320000e-18	104.0
94	TraesCS7B01G470300	chr3D	93.939	66	3	1	1719	1783	548275641	548275706	6.160000e-17	99.0
95	TraesCS7B01G470300	chr3D	90.541	74	6	1	1712	1784	548271339	548271412	2.220000e-16	97.1
96	TraesCS7B01G470300	chr2B	92.222	360	28	0	1	360	218624063	218624422	6.680000e-141	510.0
97	TraesCS7B01G470300	chr2B	95.349	301	12	2	1877	2176	593792212	593791913	6.780000e-131	477.0
98	TraesCS7B01G470300	chr2B	95.318	299	14	0	1878	2176	594061663	594061365	2.440000e-130	475.0
99	TraesCS7B01G470300	chr2B	92.830	265	19	0	427	691	218624008	218624272	4.220000e-103	385.0
100	TraesCS7B01G470300	chr5A	91.944	360	28	1	2	360	44340537	44340896	1.120000e-138	503.0
101	TraesCS7B01G470300	chr5A	95.522	67	3	0	1720	1786	117506648	117506582	1.020000e-19	108.0
102	TraesCS7B01G470300	chr2A	91.944	360	28	1	1	360	14876918	14877276	1.120000e-138	503.0
103	TraesCS7B01G470300	chr2A	90.855	339	28	3	353	691	214729249	214728914	4.110000e-123	451.0
104	TraesCS7B01G470300	chr1B	91.667	360	30	0	1	360	660416098	660415739	1.450000e-137	499.0
105	TraesCS7B01G470300	chr1B	95.318	299	13	1	1878	2176	657044585	657044882	8.770000e-130	473.0
106	TraesCS7B01G470300	chr1B	93.831	308	19	0	1869	2176	496875750	496876057	5.280000e-127	464.0
107	TraesCS7B01G470300	chr1B	92.135	267	21	0	425	691	660416155	660415889	7.070000e-101	377.0
108	TraesCS7B01G470300	chr6B	91.341	358	31	0	2	359	545466588	545466231	8.700000e-135	490.0
109	TraesCS7B01G470300	chr6B	94.371	302	16	1	1878	2178	479295958	479296259	1.900000e-126	462.0
110	TraesCS7B01G470300	chr6B	91.923	260	18	3	396	655	519339262	519339006	7.120000e-96	361.0
111	TraesCS7B01G470300	chr6B	91.078	269	21	1	426	691	545466648	545466380	7.120000e-96	361.0
112	TraesCS7B01G470300	chr1D	91.837	343	26	2	19	360	62799955	62799614	6.780000e-131	477.0
113	TraesCS7B01G470300	chr1D	90.556	360	26	4	1	360	269822686	269822335	1.130000e-128	470.0
114	TraesCS7B01G470300	chr1D	89.888	267	18	2	425	691	269822742	269822485	4.320000e-88	335.0
115	TraesCS7B01G470300	chr1D	87.636	275	32	2	386	660	387563970	387564242	4.350000e-83	318.0
116	TraesCS7B01G470300	chr1D	95.385	195	9	0	166	360	419022149	419022343	7.270000e-81	311.0
117	TraesCS7B01G470300	chr1D	94.872	195	10	0	166	360	323930351	323930157	3.380000e-79	305.0
118	TraesCS7B01G470300	chr1D	92.188	192	15	0	500	691	62799955	62799764	3.430000e-69	272.0
119	TraesCS7B01G470300	chr1D	82.943	299	43	8	37	332	476752723	476753016	2.070000e-66	263.0
120	TraesCS7B01G470300	chr1D	86.607	224	28	2	437	660	26288828	26289049	2.080000e-61	246.0
121	TraesCS7B01G470300	chr1D	95.683	139	5	1	361	499	269822440	269822303	3.510000e-54	222.0
122	TraesCS7B01G470300	chr1D	89.091	165	12	4	353	512	62799539	62799376	1.640000e-47	200.0
123	TraesCS7B01G470300	chr1D	88.485	165	13	5	353	512	198525845	198525682	7.640000e-46	195.0
124	TraesCS7B01G470300	chr1D	87.117	163	15	3	353	510	62799727	62799566	2.140000e-41	180.0
125	TraesCS7B01G470300	chr1D	81.448	221	29	10	5	222	6199529	6199318	1.290000e-38	171.0
126	TraesCS7B01G470300	chr1D	77.256	277	41	14	80	341	387563190	387562921	2.810000e-30	143.0
127	TraesCS7B01G470300	chr1D	95.455	66	3	0	1717	1782	206041070	206041005	3.680000e-19	106.0
128	TraesCS7B01G470300	chr1D	93.939	66	4	0	1717	1782	318382790	318382855	1.710000e-17	100.0
129	TraesCS7B01G470300	chr1D	93.846	65	3	1	1718	1782	263868011	263867948	2.220000e-16	97.1
130	TraesCS7B01G470300	chr3B	95.318	299	14	0	1875	2173	127361282	127361580	2.440000e-130	475.0
131	TraesCS7B01G470300	chr3B	95.270	296	13	1	1878	2173	127358674	127358968	4.080000e-128	468.0
132	TraesCS7B01G470300	chr1A	89.646	367	35	3	1	365	91042579	91042944	5.280000e-127	464.0
133	TraesCS7B01G470300	chr1A	92.606	284	19	2	353	636	554972121	554972402	9.020000e-110	407.0
134	TraesCS7B01G470300	chr1A	92.742	248	17	1	425	672	91042522	91042768	9.210000e-95	357.0
135	TraesCS7B01G470300	chr1A	91.983	237	18	1	88	324	511618504	511618739	5.580000e-87	331.0
136	TraesCS7B01G470300	chr1A	88.835	206	18	4	1	206	221666310	221666510	5.780000e-62	248.0
137	TraesCS7B01G470300	chr1A	96.825	63	2	0	1720	1782	530756574	530756636	3.680000e-19	106.0
138	TraesCS7B01G470300	chr4B	94.333	300	15	2	1874	2173	450948935	450949232	2.450000e-125	459.0
139	TraesCS7B01G470300	chr4B	95.652	69	3	0	1714	1782	640009166	640009098	7.920000e-21	111.0
140	TraesCS7B01G470300	chr4B	91.781	73	5	1	1714	1786	111788069	111787998	1.710000e-17	100.0
141	TraesCS7B01G470300	chr2D	87.222	360	25	5	1	360	619706860	619706522	9.080000e-105	390.0
142	TraesCS7B01G470300	chr2D	92.381	210	16	0	1	210	583160323	583160532	1.570000e-77	300.0
143	TraesCS7B01G470300	chr2D	96.970	66	2	0	1717	1782	534925553	534925488	7.920000e-21	111.0
144	TraesCS7B01G470300	chr2D	92.754	69	5	0	1714	1782	117843033	117843101	1.710000e-17	100.0
145	TraesCS7B01G470300	chr6A	86.313	358	45	1	3	360	125486526	125486879	1.170000e-103	387.0
146	TraesCS7B01G470300	chr6A	90.706	269	23	1	425	691	58424026	58424294	9.210000e-95	357.0
147	TraesCS7B01G470300	chrUn	94.872	195	10	0	166	360	98277888	98278082	3.380000e-79	305.0
148	TraesCS7B01G470300	chrUn	94.359	195	11	0	166	360	253448694	253448888	1.570000e-77	300.0
149	TraesCS7B01G470300	chrUn	94.359	195	11	0	166	360	364164540	364164346	1.570000e-77	300.0
150	TraesCS7B01G470300	chrUn	93.846	195	12	0	166	360	378881290	378881096	7.320000e-76	294.0
151	TraesCS7B01G470300	chrUn	93.846	195	12	0	166	360	393591937	393591743	7.320000e-76	294.0
152	TraesCS7B01G470300	chrUn	93.782	193	12	0	168	360	270511260	270511068	9.470000e-75	291.0
153	TraesCS7B01G470300	chrUn	93.333	195	13	0	166	360	60670660	60670466	3.410000e-74	289.0
154	TraesCS7B01G470300	chrUn	93.333	195	13	0	166	360	60728129	60727935	3.410000e-74	289.0
155	TraesCS7B01G470300	chrUn	93.333	195	13	0	166	360	249053458	249053652	3.410000e-74	289.0
156	TraesCS7B01G470300	chrUn	85.638	188	20	7	478	664	48581043	48581224	9.890000e-45	191.0
157	TraesCS7B01G470300	chrUn	95.763	118	3	2	361	477	98277977	98278093	3.560000e-44	189.0
158	TraesCS7B01G470300	chrUn	93.651	126	6	2	353	477	249053539	249053663	1.280000e-43	187.0
159	TraesCS7B01G470300	chrUn	93.651	126	6	2	353	477	362324316	362324440	1.280000e-43	187.0
160	TraesCS7B01G470300	chrUn	92.857	126	7	2	353	477	253448775	253448899	5.950000e-42	182.0
161	TraesCS7B01G470300	chrUn	92.857	126	7	2	353	477	270511181	270511057	5.950000e-42	182.0
162	TraesCS7B01G470300	chrUn	92.857	126	7	2	353	477	364164459	364164335	5.950000e-42	182.0
163	TraesCS7B01G470300	chrUn	92.857	126	7	2	353	477	393591856	393591732	5.950000e-42	182.0
164	TraesCS7B01G470300	chrUn	92.063	126	8	2	353	477	378881209	378881085	2.770000e-40	176.0
165	TraesCS7B01G470300	chrUn	92.063	126	8	2	353	477	411428467	411428591	2.770000e-40	176.0
166	TraesCS7B01G470300	chrUn	82.609	184	25	7	1	183	48581047	48581224	3.610000e-34	156.0
167	TraesCS7B01G470300	chrUn	93.137	102	6	1	590	691	17020935	17021035	6.030000e-32	148.0
168	TraesCS7B01G470300	chrUn	93.684	95	5	1	597	691	292135557	292135464	1.010000e-29	141.0
169	TraesCS7B01G470300	chrUn	86.598	97	8	2	425	516	54975136	54975232	4.760000e-18	102.0
170	TraesCS7B01G470300	chrUn	96.667	60	2	0	1718	1777	3346395	3346454	1.710000e-17	100.0
171	TraesCS7B01G470300	chrUn	95.000	60	3	0	1723	1782	320256179	320256120	7.970000e-16	95.3
172	TraesCS7B01G470300	chrUn	95.000	60	3	0	1723	1782	357700829	357700770	7.970000e-16	95.3
173	TraesCS7B01G470300	chrUn	92.063	63	5	0	1720	1782	28955435	28955497	3.710000e-14	89.8
174	TraesCS7B01G470300	chrUn	92.063	63	5	0	1720	1782	29029201	29029263	3.710000e-14	89.8
175	TraesCS7B01G470300	chrUn	92.063	63	5	0	1720	1782	55723697	55723635	3.710000e-14	89.8
176	TraesCS7B01G470300	chrUn	92.063	63	5	0	1720	1782	316200624	316200562	3.710000e-14	89.8
177	TraesCS7B01G470300	chrUn	90.323	62	6	0	1721	1782	8111450	8111511	6.210000e-12	82.4
178	TraesCS7B01G470300	chrUn	90.323	62	6	0	1721	1782	16901625	16901686	6.210000e-12	82.4
179	TraesCS7B01G470300	chrUn	92.308	52	4	0	640	691	270511269	270511218	1.040000e-09	75.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7B01G470300	chr7B	726611110	726613814	2704	False	4996.000000	4996	100.00000	1	2705	1	chr7B.!!$F4	2704
1	TraesCS7B01G470300	chr7B	726754619	726755513	894	False	893.000000	893	84.76100	825	1718	1	chr7B.!!$F7	893
2	TraesCS7B01G470300	chr7B	726886813	726887694	881	True	811.000000	811	83.44500	825	1709	1	chr7B.!!$R2	884
3	TraesCS7B01G470300	chr7B	726697166	726698006	840	False	747.000000	747	82.74200	877	1719	1	chr7B.!!$F5	842
4	TraesCS7B01G470300	chr7A	722128074	722128975	901	False	883.000000	883	84.53000	825	1719	1	chr7A.!!$F2	894
5	TraesCS7B01G470300	chr7A	722019356	722021504	2148	False	495.666667	1164	90.36900	718	2325	3	chr7A.!!$F3	1607
6	TraesCS7B01G470300	chr7D	626597066	626597966	900	True	815.000000	815	83.18600	825	1718	1	chr7D.!!$R4	893
7	TraesCS7B01G470300	chr7D	626438377	626439947	1570	False	401.333333	931	89.33300	777	2260	3	chr7D.!!$F4	1483
8	TraesCS7B01G470300	chr6D	14229688	14230268	580	False	346.500000	440	91.63025	1	691	4	chr6D.!!$F11	690
9	TraesCS7B01G470300	chr1D	62799376	62799955	579	True	282.250000	477	90.05825	19	691	4	chr1D.!!$R7	672
10	TraesCS7B01G470300	chr3B	127358674	127361580	2906	False	471.500000	475	95.29400	1875	2173	2	chr3B.!!$F1	298

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
298	356	0.032952	CCGGGTCGTGAACTCAAGAA	59.967	55.0	0.0	0.0	36.21	2.52	F
545	608	0.034059	AGCTATATGACGTGGGCAGC	59.966	55.0	0.0	0.0	0.00	5.25	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1108	1199	0.178891	AGAAAGGAGTCCAGGAGGCA	60.179	55.0	12.86	0.0	33.74	4.75	R
2334	4865	0.099436	CGCCACTAGCATGCCTTTTC	59.901	55.0	15.66	0.0	44.04	2.29	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
59	117	6.106648	CTCCTTTGGAGCTATATGACATGA	57.893	41.667	0.00	0.00	43.29	3.07
61	119	7.083062	TCCTTTGGAGCTATATGACATGAAT	57.917	36.000	0.00	0.00	0.00	2.57
206	264	2.550978	AGGCAGCACATTATACGTCAC	58.449	47.619	0.00	0.00	0.00	3.67
243	301	1.153349	GCTCCCTCAGGCCTAAACG	60.153	63.158	3.98	0.00	0.00	3.60
249	307	0.608640	CTCAGGCCTAAACGTGGACT	59.391	55.000	3.98	0.00	45.41	3.85
252	310	1.276622	AGGCCTAAACGTGGACTGAT	58.723	50.000	1.29	0.00	42.31	2.90
269	327	4.599041	ACTGATAGTGGGCTGCAATTTAA	58.401	39.130	0.50	0.00	0.00	1.52
270	328	5.203528	ACTGATAGTGGGCTGCAATTTAAT	58.796	37.500	0.50	0.00	0.00	1.40
271	329	5.658190	ACTGATAGTGGGCTGCAATTTAATT	59.342	36.000	0.50	0.00	0.00	1.40
272	330	5.904941	TGATAGTGGGCTGCAATTTAATTG	58.095	37.500	12.84	12.84	43.06	2.32
281	339	0.922717	CAATTTAATTGCGCCAGCCG	59.077	50.000	4.18	0.00	44.33	5.52
283	341	2.015227	ATTTAATTGCGCCAGCCGGG	62.015	55.000	4.18	0.00	44.33	5.73
292	350	4.003788	CCAGCCGGGTCGTGAACT	62.004	66.667	1.27	0.00	0.00	3.01
293	351	2.432628	CAGCCGGGTCGTGAACTC	60.433	66.667	1.27	0.00	0.00	3.01
294	352	2.915659	AGCCGGGTCGTGAACTCA	60.916	61.111	0.00	0.00	0.00	3.41
296	354	2.027625	GCCGGGTCGTGAACTCAAG	61.028	63.158	2.18	0.00	0.00	3.02
297	355	1.663739	CCGGGTCGTGAACTCAAGA	59.336	57.895	0.00	0.00	32.16	3.02
298	356	0.032952	CCGGGTCGTGAACTCAAGAA	59.967	55.000	0.00	0.00	36.21	2.52
299	357	1.137513	CGGGTCGTGAACTCAAGAAC	58.862	55.000	2.46	2.46	40.55	3.01
301	359	2.405172	GGGTCGTGAACTCAAGAACTC	58.595	52.381	9.96	0.00	40.96	3.01
303	361	3.492829	GGGTCGTGAACTCAAGAACTCTT	60.493	47.826	9.96	0.00	40.96	2.85
314	372	3.528597	AAGAACTCTTGGCTCCGATAC	57.471	47.619	0.00	0.00	34.38	2.24
315	373	1.757699	AGAACTCTTGGCTCCGATACC	59.242	52.381	0.00	0.00	0.00	2.73
316	374	1.480954	GAACTCTTGGCTCCGATACCA	59.519	52.381	0.00	0.00	0.00	3.25
317	375	1.794714	ACTCTTGGCTCCGATACCAT	58.205	50.000	0.00	0.00	35.42	3.55
318	376	1.414181	ACTCTTGGCTCCGATACCATG	59.586	52.381	0.00	0.00	35.42	3.66
319	377	1.414181	CTCTTGGCTCCGATACCATGT	59.586	52.381	0.00	0.00	35.42	3.21
320	378	2.628178	CTCTTGGCTCCGATACCATGTA	59.372	50.000	0.00	0.00	35.42	2.29
321	379	2.628178	TCTTGGCTCCGATACCATGTAG	59.372	50.000	0.00	0.00	35.42	2.74
322	380	2.375014	TGGCTCCGATACCATGTAGA	57.625	50.000	0.00	0.00	0.00	2.59
323	381	2.673258	TGGCTCCGATACCATGTAGAA	58.327	47.619	0.00	0.00	0.00	2.10
324	382	2.628178	TGGCTCCGATACCATGTAGAAG	59.372	50.000	0.00	0.00	0.00	2.85
325	383	2.628657	GGCTCCGATACCATGTAGAAGT	59.371	50.000	0.00	0.00	0.00	3.01
326	384	3.553096	GGCTCCGATACCATGTAGAAGTG	60.553	52.174	0.00	0.00	0.00	3.16
327	385	3.643763	CTCCGATACCATGTAGAAGTGC	58.356	50.000	0.00	0.00	0.00	4.40
328	386	3.028130	TCCGATACCATGTAGAAGTGCA	58.972	45.455	0.00	0.00	0.00	4.57
329	387	3.641436	TCCGATACCATGTAGAAGTGCAT	59.359	43.478	0.00	0.00	0.00	3.96
330	388	3.742882	CCGATACCATGTAGAAGTGCATG	59.257	47.826	0.00	0.00	44.17	4.06
331	389	3.185188	CGATACCATGTAGAAGTGCATGC	59.815	47.826	11.82	11.82	43.45	4.06
332	390	2.795231	ACCATGTAGAAGTGCATGCT	57.205	45.000	20.33	0.00	43.45	3.79
333	391	2.636830	ACCATGTAGAAGTGCATGCTC	58.363	47.619	20.33	15.94	43.45	4.26
334	392	2.238144	ACCATGTAGAAGTGCATGCTCT	59.762	45.455	20.33	18.23	43.45	4.09
335	393	3.452264	ACCATGTAGAAGTGCATGCTCTA	59.548	43.478	21.70	15.62	43.45	2.43
336	394	4.056740	CCATGTAGAAGTGCATGCTCTAG	58.943	47.826	21.70	7.70	43.45	2.43
337	395	3.170791	TGTAGAAGTGCATGCTCTAGC	57.829	47.619	21.70	16.29	42.50	3.42
338	396	2.159043	TGTAGAAGTGCATGCTCTAGCC	60.159	50.000	21.70	13.81	41.18	3.93
339	397	0.907486	AGAAGTGCATGCTCTAGCCA	59.093	50.000	21.70	0.00	41.18	4.75
340	398	1.280133	AGAAGTGCATGCTCTAGCCAA	59.720	47.619	21.70	0.00	41.18	4.52
341	399	2.092538	AGAAGTGCATGCTCTAGCCAAT	60.093	45.455	21.70	5.92	41.18	3.16
342	400	3.135348	AGAAGTGCATGCTCTAGCCAATA	59.865	43.478	21.70	0.00	41.18	1.90
343	401	2.843701	AGTGCATGCTCTAGCCAATAC	58.156	47.619	20.22	4.96	41.18	1.89
344	402	2.171237	AGTGCATGCTCTAGCCAATACA	59.829	45.455	20.22	0.00	41.18	2.29
345	403	2.945008	GTGCATGCTCTAGCCAATACAA	59.055	45.455	20.33	0.00	41.18	2.41
346	404	2.945008	TGCATGCTCTAGCCAATACAAC	59.055	45.455	20.33	0.00	41.18	3.32
347	405	2.945008	GCATGCTCTAGCCAATACAACA	59.055	45.455	11.37	0.00	41.18	3.33
348	406	3.567164	GCATGCTCTAGCCAATACAACAT	59.433	43.478	11.37	0.00	41.18	2.71
349	407	4.756642	GCATGCTCTAGCCAATACAACATA	59.243	41.667	11.37	0.00	41.18	2.29
350	408	5.239306	GCATGCTCTAGCCAATACAACATAA	59.761	40.000	11.37	0.00	41.18	1.90
351	409	6.238731	GCATGCTCTAGCCAATACAACATAAA	60.239	38.462	11.37	0.00	41.18	1.40
352	410	6.925610	TGCTCTAGCCAATACAACATAAAG	57.074	37.500	0.00	0.00	41.18	1.85
353	411	6.649155	TGCTCTAGCCAATACAACATAAAGA	58.351	36.000	0.00	0.00	41.18	2.52
354	412	6.538742	TGCTCTAGCCAATACAACATAAAGAC	59.461	38.462	0.00	0.00	41.18	3.01
355	413	6.017852	GCTCTAGCCAATACAACATAAAGACC	60.018	42.308	0.00	0.00	34.31	3.85
356	414	6.046593	TCTAGCCAATACAACATAAAGACCG	58.953	40.000	0.00	0.00	0.00	4.79
357	415	4.839121	AGCCAATACAACATAAAGACCGA	58.161	39.130	0.00	0.00	0.00	4.69
358	416	5.437060	AGCCAATACAACATAAAGACCGAT	58.563	37.500	0.00	0.00	0.00	4.18
359	417	5.527582	AGCCAATACAACATAAAGACCGATC	59.472	40.000	0.00	0.00	0.00	3.69
360	418	5.558273	GCCAATACAACATAAAGACCGATCG	60.558	44.000	8.51	8.51	0.00	3.69
361	419	5.522460	CCAATACAACATAAAGACCGATCGT	59.478	40.000	15.09	1.83	0.00	3.73
362	420	6.410845	CAATACAACATAAAGACCGATCGTG	58.589	40.000	15.09	8.18	0.00	4.35
363	421	3.259064	ACAACATAAAGACCGATCGTGG	58.741	45.455	15.09	1.70	0.00	4.94
364	422	2.596904	ACATAAAGACCGATCGTGGG	57.403	50.000	15.09	0.90	0.00	4.61
365	423	1.217882	CATAAAGACCGATCGTGGGC	58.782	55.000	15.09	1.10	37.26	5.36
369	427	4.451150	GACCGATCGTGGGCTGCA	62.451	66.667	15.09	0.00	32.64	4.41
370	428	3.950794	GACCGATCGTGGGCTGCAA	62.951	63.158	15.09	0.00	32.64	4.08
371	429	2.514592	CCGATCGTGGGCTGCAAT	60.515	61.111	15.09	0.00	0.00	3.56
372	430	2.114670	CCGATCGTGGGCTGCAATT	61.115	57.895	15.09	0.00	0.00	2.32
373	431	1.656818	CCGATCGTGGGCTGCAATTT	61.657	55.000	15.09	0.00	0.00	1.82
374	432	0.171007	CGATCGTGGGCTGCAATTTT	59.829	50.000	7.03	0.00	0.00	1.82
375	433	1.400142	CGATCGTGGGCTGCAATTTTA	59.600	47.619	7.03	0.00	0.00	1.52
459	517	3.554752	GCTCTAGCCAATGCAACCAAAAA	60.555	43.478	0.00	0.00	41.13	1.94
479	542	1.231641	CCGATCTGAGGGAGAGGGT	59.768	63.158	0.00	0.00	32.80	4.34
482	545	0.825840	GATCTGAGGGAGAGGGTCGG	60.826	65.000	0.00	0.00	32.80	4.79
524	587	2.544685	CCTCACGTCTATGCTCCTTTG	58.455	52.381	0.00	0.00	0.00	2.77
525	588	2.544685	CTCACGTCTATGCTCCTTTGG	58.455	52.381	0.00	0.00	0.00	3.28
526	589	2.166459	CTCACGTCTATGCTCCTTTGGA	59.834	50.000	0.00	0.00	0.00	3.53
538	601	4.592485	CTCCTTTGGAGCTATATGACGT	57.408	45.455	0.27	0.00	43.29	4.34
539	602	4.302455	CTCCTTTGGAGCTATATGACGTG	58.698	47.826	0.00	0.00	43.29	4.49
540	603	3.069586	TCCTTTGGAGCTATATGACGTGG	59.930	47.826	0.00	0.00	0.00	4.94
541	604	3.393800	CTTTGGAGCTATATGACGTGGG	58.606	50.000	0.00	0.00	0.00	4.61
542	605	0.679505	TGGAGCTATATGACGTGGGC	59.320	55.000	0.00	0.00	0.00	5.36
543	606	0.679505	GGAGCTATATGACGTGGGCA	59.320	55.000	0.00	0.00	0.00	5.36
544	607	1.337260	GGAGCTATATGACGTGGGCAG	60.337	57.143	0.00	0.00	0.00	4.85
545	608	0.034059	AGCTATATGACGTGGGCAGC	59.966	55.000	0.00	0.00	0.00	5.25
546	609	1.284982	GCTATATGACGTGGGCAGCG	61.285	60.000	0.00	0.00	0.00	5.18
547	610	0.667487	CTATATGACGTGGGCAGCGG	60.667	60.000	0.00	0.00	0.00	5.52
548	611	1.110518	TATATGACGTGGGCAGCGGA	61.111	55.000	0.00	0.00	0.00	5.54
549	612	1.966901	ATATGACGTGGGCAGCGGAA	61.967	55.000	0.00	0.00	0.00	4.30
550	613	2.572095	TATGACGTGGGCAGCGGAAG	62.572	60.000	0.00	0.00	0.00	3.46
569	632	2.607442	GGGGGCAGGCCACAATTT	60.607	61.111	15.54	0.00	42.49	1.82
570	633	2.223443	GGGGGCAGGCCACAATTTT	61.223	57.895	15.54	0.00	42.49	1.82
571	634	1.760527	GGGGCAGGCCACAATTTTT	59.239	52.632	16.36	0.00	39.85	1.94
594	657	9.798994	TTTTTATTGCGTTTACTAGGTTTTGAA	57.201	25.926	0.00	0.00	0.00	2.69
595	658	8.785468	TTTATTGCGTTTACTAGGTTTTGAAC	57.215	30.769	0.00	0.00	0.00	3.18
606	669	2.945456	GGTTTTGAACCCTGAACCTCT	58.055	47.619	0.00	0.00	46.12	3.69
607	670	3.296854	GGTTTTGAACCCTGAACCTCTT	58.703	45.455	0.00	0.00	46.12	2.85
608	671	3.068165	GGTTTTGAACCCTGAACCTCTTG	59.932	47.826	0.00	0.00	46.12	3.02
609	672	2.656947	TTGAACCCTGAACCTCTTGG	57.343	50.000	0.00	0.00	39.83	3.61
623	686	5.959618	ACCTCTTGGTTGTAAGTTTATGC	57.040	39.130	0.00	0.00	46.05	3.14
624	687	5.381757	ACCTCTTGGTTGTAAGTTTATGCA	58.618	37.500	0.00	0.00	46.05	3.96
625	688	5.240844	ACCTCTTGGTTGTAAGTTTATGCAC	59.759	40.000	0.00	0.00	46.05	4.57
626	689	5.335661	CCTCTTGGTTGTAAGTTTATGCACC	60.336	44.000	0.00	0.00	0.00	5.01
627	690	5.381757	TCTTGGTTGTAAGTTTATGCACCT	58.618	37.500	0.00	0.00	0.00	4.00
628	691	6.535540	TCTTGGTTGTAAGTTTATGCACCTA	58.464	36.000	0.00	0.00	0.00	3.08
629	692	6.999272	TCTTGGTTGTAAGTTTATGCACCTAA	59.001	34.615	0.00	0.00	0.00	2.69
630	693	6.563222	TGGTTGTAAGTTTATGCACCTAAC	57.437	37.500	0.00	0.00	0.00	2.34
631	694	5.474189	TGGTTGTAAGTTTATGCACCTAACC	59.526	40.000	0.00	0.00	35.59	2.85
632	695	5.474189	GGTTGTAAGTTTATGCACCTAACCA	59.526	40.000	0.00	0.00	35.23	3.67
633	696	6.349033	GGTTGTAAGTTTATGCACCTAACCAG	60.349	42.308	0.00	0.00	35.23	4.00
634	697	5.871834	TGTAAGTTTATGCACCTAACCAGT	58.128	37.500	0.00	0.00	0.00	4.00
635	698	6.300703	TGTAAGTTTATGCACCTAACCAGTT	58.699	36.000	0.00	0.00	0.00	3.16
636	699	5.959618	AAGTTTATGCACCTAACCAGTTC	57.040	39.130	0.00	0.00	0.00	3.01
637	700	4.980573	AGTTTATGCACCTAACCAGTTCA	58.019	39.130	0.00	0.00	0.00	3.18
638	701	5.570320	AGTTTATGCACCTAACCAGTTCAT	58.430	37.500	0.00	0.00	0.00	2.57
639	702	5.648092	AGTTTATGCACCTAACCAGTTCATC	59.352	40.000	0.00	0.00	0.00	2.92
640	703	2.489938	TGCACCTAACCAGTTCATCC	57.510	50.000	0.00	0.00	0.00	3.51
641	704	1.702401	TGCACCTAACCAGTTCATCCA	59.298	47.619	0.00	0.00	0.00	3.41
642	705	2.308570	TGCACCTAACCAGTTCATCCAT	59.691	45.455	0.00	0.00	0.00	3.41
643	706	3.521531	TGCACCTAACCAGTTCATCCATA	59.478	43.478	0.00	0.00	0.00	2.74
644	707	4.018870	TGCACCTAACCAGTTCATCCATAA	60.019	41.667	0.00	0.00	0.00	1.90
645	708	4.576463	GCACCTAACCAGTTCATCCATAAG	59.424	45.833	0.00	0.00	0.00	1.73
646	709	5.629133	GCACCTAACCAGTTCATCCATAAGA	60.629	44.000	0.00	0.00	0.00	2.10
647	710	6.595682	CACCTAACCAGTTCATCCATAAGAT	58.404	40.000	0.00	0.00	34.66	2.40
648	711	6.708054	CACCTAACCAGTTCATCCATAAGATC	59.292	42.308	0.00	0.00	30.59	2.75
649	712	5.928839	CCTAACCAGTTCATCCATAAGATCG	59.071	44.000	0.00	0.00	30.59	3.69
650	713	5.614324	AACCAGTTCATCCATAAGATCGA	57.386	39.130	0.00	0.00	30.59	3.59
651	714	5.815233	ACCAGTTCATCCATAAGATCGAT	57.185	39.130	0.00	0.00	30.59	3.59
652	715	5.788450	ACCAGTTCATCCATAAGATCGATC	58.212	41.667	17.91	17.91	30.59	3.69
653	716	5.541868	ACCAGTTCATCCATAAGATCGATCT	59.458	40.000	22.32	22.32	39.22	2.75
654	717	5.868258	CCAGTTCATCCATAAGATCGATCTG	59.132	44.000	27.93	16.29	37.19	2.90
655	718	6.294955	CCAGTTCATCCATAAGATCGATCTGA	60.295	42.308	27.93	21.63	37.19	3.27
656	719	7.321908	CAGTTCATCCATAAGATCGATCTGAT	58.678	38.462	27.93	22.94	41.06	2.90
657	720	7.275999	CAGTTCATCCATAAGATCGATCTGATG	59.724	40.741	33.34	33.34	42.88	3.07
664	727	7.155655	CATAAGATCGATCTGATGGAAGAGA	57.844	40.000	32.93	10.86	40.60	3.10
665	728	5.452078	AAGATCGATCTGATGGAAGAGAC	57.548	43.478	27.93	0.00	37.47	3.36
666	729	4.728772	AGATCGATCTGATGGAAGAGACT	58.271	43.478	26.78	0.00	37.47	3.24
667	730	5.875224	AGATCGATCTGATGGAAGAGACTA	58.125	41.667	26.78	0.00	37.47	2.59
668	731	5.939883	AGATCGATCTGATGGAAGAGACTAG	59.060	44.000	26.78	0.00	37.47	2.57
669	732	4.393834	TCGATCTGATGGAAGAGACTAGG	58.606	47.826	0.00	0.00	0.00	3.02
670	733	3.057596	CGATCTGATGGAAGAGACTAGGC	60.058	52.174	0.00	0.00	0.00	3.93
671	734	3.388552	TCTGATGGAAGAGACTAGGCA	57.611	47.619	0.00	0.00	0.00	4.75
672	735	3.295093	TCTGATGGAAGAGACTAGGCAG	58.705	50.000	0.00	0.00	0.00	4.85
673	736	1.759445	TGATGGAAGAGACTAGGCAGC	59.241	52.381	0.00	0.00	0.00	5.25
674	737	1.759445	GATGGAAGAGACTAGGCAGCA	59.241	52.381	0.00	0.00	0.00	4.41
675	738	1.871418	TGGAAGAGACTAGGCAGCAT	58.129	50.000	0.00	0.00	0.00	3.79
676	739	3.032265	TGGAAGAGACTAGGCAGCATA	57.968	47.619	0.00	0.00	0.00	3.14
677	740	3.581101	TGGAAGAGACTAGGCAGCATAT	58.419	45.455	0.00	0.00	0.00	1.78
678	741	3.969976	TGGAAGAGACTAGGCAGCATATT	59.030	43.478	0.00	0.00	0.00	1.28
679	742	5.147767	TGGAAGAGACTAGGCAGCATATTA	58.852	41.667	0.00	0.00	0.00	0.98
680	743	5.782331	TGGAAGAGACTAGGCAGCATATTAT	59.218	40.000	0.00	0.00	0.00	1.28
681	744	6.954102	TGGAAGAGACTAGGCAGCATATTATA	59.046	38.462	0.00	0.00	0.00	0.98
682	745	7.621285	TGGAAGAGACTAGGCAGCATATTATAT	59.379	37.037	0.00	0.00	0.00	0.86
683	746	7.925483	GGAAGAGACTAGGCAGCATATTATATG	59.075	40.741	7.79	7.79	0.00	1.78
684	747	6.815089	AGAGACTAGGCAGCATATTATATGC	58.185	40.000	24.87	24.87	44.85	3.14
691	754	5.375417	GCAGCATATTATATGCCAACACA	57.625	39.130	27.45	0.00	45.59	3.72
692	755	5.771469	GCAGCATATTATATGCCAACACAA	58.229	37.500	27.45	0.00	45.59	3.33
693	756	5.630680	GCAGCATATTATATGCCAACACAAC	59.369	40.000	27.45	9.52	45.59	3.32
694	757	6.515531	GCAGCATATTATATGCCAACACAACT	60.516	38.462	27.45	8.39	45.59	3.16
695	758	6.859508	CAGCATATTATATGCCAACACAACTG	59.140	38.462	27.45	15.23	45.59	3.16
696	759	6.772233	AGCATATTATATGCCAACACAACTGA	59.228	34.615	27.45	0.00	45.59	3.41
697	760	7.449395	AGCATATTATATGCCAACACAACTGAT	59.551	33.333	27.45	7.13	45.59	2.90
698	761	8.729756	GCATATTATATGCCAACACAACTGATA	58.270	33.333	22.59	0.00	39.01	2.15
701	764	7.786178	TTATATGCCAACACAACTGATACTC	57.214	36.000	0.00	0.00	0.00	2.59
702	765	2.412870	TGCCAACACAACTGATACTCG	58.587	47.619	0.00	0.00	0.00	4.18
703	766	2.036604	TGCCAACACAACTGATACTCGA	59.963	45.455	0.00	0.00	0.00	4.04
704	767	2.668457	GCCAACACAACTGATACTCGAG	59.332	50.000	11.84	11.84	0.00	4.04
705	768	3.614150	GCCAACACAACTGATACTCGAGA	60.614	47.826	21.68	2.92	0.00	4.04
706	769	4.169508	CCAACACAACTGATACTCGAGAG	58.830	47.826	21.68	8.48	0.00	3.20
707	770	4.082733	CCAACACAACTGATACTCGAGAGA	60.083	45.833	21.68	6.86	39.12	3.10
740	803	5.803552	AGCTCAGATGGGATCTTTATAAGC	58.196	41.667	0.00	0.00	37.58	3.09
762	825	1.858041	CAACGCTGCACAGACTCAG	59.142	57.895	0.81	0.00	0.00	3.35
765	828	1.006922	CGCTGCACAGACTCAGACA	60.007	57.895	0.81	0.00	32.26	3.41
768	831	1.780806	CTGCACAGACTCAGACACAG	58.219	55.000	0.00	0.00	32.26	3.66
769	832	1.339291	CTGCACAGACTCAGACACAGA	59.661	52.381	0.00	0.00	32.26	3.41
772	835	2.736978	CACAGACTCAGACACAGACAC	58.263	52.381	0.00	0.00	0.00	3.67
773	836	2.099756	CACAGACTCAGACACAGACACA	59.900	50.000	0.00	0.00	0.00	3.72
815	882	1.805945	CAGCTCGACCGTAAGCCAC	60.806	63.158	2.51	0.00	39.39	5.01
858	949	2.280552	CCCGTCGAGGTCTCCCAAA	61.281	63.158	4.18	0.00	38.74	3.28
860	951	1.533469	CCGTCGAGGTCTCCCAAAGT	61.533	60.000	4.18	0.00	34.51	2.66
861	952	1.171308	CGTCGAGGTCTCCCAAAGTA	58.829	55.000	0.00	0.00	0.00	2.24
927	1018	1.450312	CCGCTCACACCCAATCCTC	60.450	63.158	0.00	0.00	0.00	3.71
930	1021	1.599047	CTCACACCCAATCCTCGCT	59.401	57.895	0.00	0.00	0.00	4.93
933	1024	0.107508	CACACCCAATCCTCGCTCAT	60.108	55.000	0.00	0.00	0.00	2.90
1037	1128	2.102357	CGTAGACGCGCTCCATGT	59.898	61.111	5.73	0.00	0.00	3.21
1046	1137	4.854784	GCTCCATGTCGCGCTCGA	62.855	66.667	5.56	0.00	43.28	4.04
1062	1153	1.153489	CGACGACCTCCTCGACCTA	60.153	63.158	0.00	0.00	46.14	3.08
1125	1216	0.474660	ACTGCCTCCTGGACTCCTTT	60.475	55.000	0.00	0.00	34.57	3.11
1130	1221	1.553417	CCTCCTGGACTCCTTTCTCCA	60.553	57.143	0.00	0.00	35.20	3.86
1161	1252	2.032528	CACGGCTGCTTCCAGGAA	59.967	61.111	0.71	0.71	39.54	3.36
1172	1263	1.434513	TTCCAGGAAGCCATGGTGGT	61.435	55.000	14.67	0.00	40.46	4.16
1272	1406	3.702048	CGCAGGACCGGGAAGGAA	61.702	66.667	6.32	0.00	45.00	3.36
1273	1407	2.998949	GCAGGACCGGGAAGGAAT	59.001	61.111	6.32	0.00	45.00	3.01
1509	1643	3.702048	GCGCTGGTGTCCCTGGTA	61.702	66.667	0.00	0.00	0.00	3.25
1629	1766	2.123251	GAGGAGATGGAGGCCGGA	60.123	66.667	5.05	0.00	0.00	5.14
1646	1783	0.673956	GGAAGCGAGAAGGTGTTCCC	60.674	60.000	0.00	0.00	32.48	3.97
1662	1799	3.753434	CCGAGCCTCGTGCAGACT	61.753	66.667	13.83	0.00	44.83	3.24
1711	1848	3.753272	GCTCCACATCTTCTAACTTTGCA	59.247	43.478	0.00	0.00	0.00	4.08
1712	1849	4.378874	GCTCCACATCTTCTAACTTTGCAC	60.379	45.833	0.00	0.00	0.00	4.57
1713	1850	4.973168	TCCACATCTTCTAACTTTGCACT	58.027	39.130	0.00	0.00	0.00	4.40
1714	1851	4.756642	TCCACATCTTCTAACTTTGCACTG	59.243	41.667	0.00	0.00	0.00	3.66
1717	1854	5.237127	CACATCTTCTAACTTTGCACTGTCA	59.763	40.000	0.00	0.00	0.00	3.58
1718	1855	6.000219	ACATCTTCTAACTTTGCACTGTCAT	59.000	36.000	0.00	0.00	0.00	3.06
1719	1856	5.929697	TCTTCTAACTTTGCACTGTCATG	57.070	39.130	0.00	0.00	0.00	3.07
1720	1857	5.368145	TCTTCTAACTTTGCACTGTCATGT	58.632	37.500	0.00	0.00	0.00	3.21
1721	1858	6.521162	TCTTCTAACTTTGCACTGTCATGTA	58.479	36.000	0.00	0.00	0.00	2.29
1723	1860	5.853936	TCTAACTTTGCACTGTCATGTACT	58.146	37.500	0.00	0.00	0.00	2.73
1724	1861	5.926542	TCTAACTTTGCACTGTCATGTACTC	59.073	40.000	0.00	0.00	0.00	2.59
1726	1863	4.310769	ACTTTGCACTGTCATGTACTCTC	58.689	43.478	0.00	0.00	0.00	3.20
1728	1865	3.857549	TGCACTGTCATGTACTCTCTC	57.142	47.619	0.00	0.00	0.00	3.20
1730	1867	2.478709	GCACTGTCATGTACTCTCTCCG	60.479	54.545	0.00	0.00	0.00	4.63
1732	1869	3.939592	CACTGTCATGTACTCTCTCCGTA	59.060	47.826	0.00	0.00	0.00	4.02
1733	1870	4.395231	CACTGTCATGTACTCTCTCCGTAA	59.605	45.833	0.00	0.00	0.00	3.18
1734	1871	5.008331	ACTGTCATGTACTCTCTCCGTAAA	58.992	41.667	0.00	0.00	0.00	2.01
1735	1872	5.124138	ACTGTCATGTACTCTCTCCGTAAAG	59.876	44.000	0.00	0.00	0.00	1.85
1736	1873	5.250982	TGTCATGTACTCTCTCCGTAAAGA	58.749	41.667	0.00	0.00	0.00	2.52
1737	1874	5.708697	TGTCATGTACTCTCTCCGTAAAGAA	59.291	40.000	0.00	0.00	0.00	2.52
1738	1875	6.208007	TGTCATGTACTCTCTCCGTAAAGAAA	59.792	38.462	0.00	0.00	0.00	2.52
1739	1876	7.093902	TGTCATGTACTCTCTCCGTAAAGAAAT	60.094	37.037	0.00	0.00	0.00	2.17
1740	1877	8.404000	GTCATGTACTCTCTCCGTAAAGAAATA	58.596	37.037	0.00	0.00	0.00	1.40
1741	1878	9.132923	TCATGTACTCTCTCCGTAAAGAAATAT	57.867	33.333	0.00	0.00	0.00	1.28
1748	1885	8.348983	TCTCTCCGTAAAGAAATATAAAAGCG	57.651	34.615	0.00	0.00	0.00	4.68
1749	1886	7.977853	TCTCTCCGTAAAGAAATATAAAAGCGT	59.022	33.333	0.00	0.00	0.00	5.07
1750	1887	8.483307	TCTCCGTAAAGAAATATAAAAGCGTT	57.517	30.769	0.00	0.00	0.00	4.84
1751	1888	8.938906	TCTCCGTAAAGAAATATAAAAGCGTTT	58.061	29.630	2.53	2.53	0.00	3.60
1767	1904	8.828688	AAAAGCGTTTAGATCACTAAAGTAGT	57.171	30.769	0.00	0.00	45.42	2.73
1781	1918	7.393841	ACTAAAGTAGTGATCTAAACGCTCT	57.606	36.000	0.00	0.00	37.69	4.09
1783	1920	8.614346	ACTAAAGTAGTGATCTAAACGCTCTAG	58.386	37.037	0.00	0.00	37.69	2.43
1784	1921	7.393841	AAAGTAGTGATCTAAACGCTCTAGT	57.606	36.000	0.00	0.00	0.00	2.57
1884	3863	5.695424	AGAAGGAATTTGTAGTACTCCCC	57.305	43.478	0.00	0.00	0.00	4.81
1943	3922	1.636003	GACAAAGGAGGAGGGGACAAT	59.364	52.381	0.00	0.00	0.00	2.71
1957	3936	6.099845	GGAGGGGACAATGAGAGACTTTAATA	59.900	42.308	0.00	0.00	0.00	0.98
2016	3995	3.462483	ACCACTACATGTCGTGTTTGA	57.538	42.857	24.11	0.00	42.29	2.69
2107	4086	3.128242	ACGAGGTAGAAGTCAATGTACCG	59.872	47.826	0.00	0.00	42.49	4.02
2139	4118	7.569240	AGTGTTTTGGGATTATTTGGTTTTCA	58.431	30.769	0.00	0.00	0.00	2.69
2160	4682	9.653287	TTTTCATAAGATGACTTACACACCTAG	57.347	33.333	0.00	0.00	40.71	3.02
2193	4722	4.137116	ACTAATCTTGGTTCTGCGCATA	57.863	40.909	12.24	0.00	0.00	3.14
2197	4726	6.765989	ACTAATCTTGGTTCTGCGCATAATTA	59.234	34.615	12.24	3.79	0.00	1.40
2198	4727	5.679734	ATCTTGGTTCTGCGCATAATTAG	57.320	39.130	12.24	9.10	0.00	1.73
2199	4728	4.513442	TCTTGGTTCTGCGCATAATTAGT	58.487	39.130	12.24	0.00	0.00	2.24
2200	4729	4.332543	TCTTGGTTCTGCGCATAATTAGTG	59.667	41.667	12.24	0.00	0.00	2.74
2262	4793	8.986991	AGAGAAGTGGAGAGTGATAAAATATGT	58.013	33.333	0.00	0.00	0.00	2.29
2266	4797	9.823647	AAGTGGAGAGTGATAAAATATGTAGTG	57.176	33.333	0.00	0.00	0.00	2.74
2267	4798	7.928706	AGTGGAGAGTGATAAAATATGTAGTGC	59.071	37.037	0.00	0.00	0.00	4.40
2273	4804	7.868775	AGTGATAAAATATGTAGTGCATGCAG	58.131	34.615	23.41	0.00	38.47	4.41
2280	4811	2.093890	TGTAGTGCATGCAGGGAATTG	58.906	47.619	23.41	0.00	0.00	2.32
2320	4851	9.979578	ATCACTGATCAGAAGTAATCTTATCAC	57.020	33.333	29.27	0.00	41.61	3.06
2325	4856	7.987458	TGATCAGAAGTAATCTTATCACCCAAC	59.013	37.037	0.00	0.00	41.61	3.77
2326	4857	7.252612	TCAGAAGTAATCTTATCACCCAACA	57.747	36.000	0.00	0.00	35.73	3.33
2327	4858	7.103641	TCAGAAGTAATCTTATCACCCAACAC	58.896	38.462	0.00	0.00	35.73	3.32
2328	4859	7.038302	TCAGAAGTAATCTTATCACCCAACACT	60.038	37.037	0.00	0.00	35.73	3.55
2329	4860	8.258007	CAGAAGTAATCTTATCACCCAACACTA	58.742	37.037	0.00	0.00	35.73	2.74
2330	4861	8.258708	AGAAGTAATCTTATCACCCAACACTAC	58.741	37.037	0.00	0.00	33.39	2.73
2331	4862	7.735326	AGTAATCTTATCACCCAACACTACT	57.265	36.000	0.00	0.00	0.00	2.57
2332	4863	8.834004	AGTAATCTTATCACCCAACACTACTA	57.166	34.615	0.00	0.00	0.00	1.82
2333	4864	8.915036	AGTAATCTTATCACCCAACACTACTAG	58.085	37.037	0.00	0.00	0.00	2.57
2334	4865	6.732896	ATCTTATCACCCAACACTACTAGG	57.267	41.667	0.00	0.00	0.00	3.02
2335	4866	5.834460	TCTTATCACCCAACACTACTAGGA	58.166	41.667	0.00	0.00	0.00	2.94
2336	4867	6.258354	TCTTATCACCCAACACTACTAGGAA	58.742	40.000	0.00	0.00	0.00	3.36
2337	4868	6.727231	TCTTATCACCCAACACTACTAGGAAA	59.273	38.462	0.00	0.00	0.00	3.13
2338	4869	5.836024	ATCACCCAACACTACTAGGAAAA	57.164	39.130	0.00	0.00	0.00	2.29
2339	4870	5.223449	TCACCCAACACTACTAGGAAAAG	57.777	43.478	0.00	0.00	0.00	2.27
2340	4871	4.041198	TCACCCAACACTACTAGGAAAAGG	59.959	45.833	0.00	0.00	0.00	3.11
2341	4872	3.244805	ACCCAACACTACTAGGAAAAGGC	60.245	47.826	0.00	0.00	0.00	4.35
2342	4873	3.244770	CCCAACACTACTAGGAAAAGGCA	60.245	47.826	0.00	0.00	0.00	4.75
2343	4874	4.567747	CCCAACACTACTAGGAAAAGGCAT	60.568	45.833	0.00	0.00	0.00	4.40
2344	4875	4.396166	CCAACACTACTAGGAAAAGGCATG	59.604	45.833	0.00	0.00	0.00	4.06
2345	4876	3.610911	ACACTACTAGGAAAAGGCATGC	58.389	45.455	9.90	9.90	0.00	4.06
2346	4877	3.264450	ACACTACTAGGAAAAGGCATGCT	59.736	43.478	18.92	0.00	0.00	3.79
2347	4878	4.469945	ACACTACTAGGAAAAGGCATGCTA	59.530	41.667	18.92	0.00	0.00	3.49
2348	4879	5.053145	CACTACTAGGAAAAGGCATGCTAG	58.947	45.833	18.92	11.65	42.54	3.42
2350	4881	3.878778	ACTAGGAAAAGGCATGCTAGTG	58.121	45.455	18.92	1.52	46.30	2.74
2351	4882	2.134789	AGGAAAAGGCATGCTAGTGG	57.865	50.000	18.92	0.00	0.00	4.00
2352	4883	0.457443	GGAAAAGGCATGCTAGTGGC	59.543	55.000	18.92	0.00	44.31	5.01
2356	4887	3.880846	GGCATGCTAGTGGCGCAC	61.881	66.667	18.92	5.73	45.43	5.34
2357	4888	3.880846	GCATGCTAGTGGCGCACC	61.881	66.667	11.37	0.00	45.43	5.01
2358	4889	2.436469	CATGCTAGTGGCGCACCA	60.436	61.111	10.83	0.00	46.51	4.17
2366	4897	3.910490	TGGCGCACCAGTTTTGCC	61.910	61.111	10.83	0.00	42.67	4.52
2367	4898	3.605664	GGCGCACCAGTTTTGCCT	61.606	61.111	10.83	0.00	42.44	4.75
2368	4899	2.417097	GCGCACCAGTTTTGCCTT	59.583	55.556	0.30	0.00	36.57	4.35
2369	4900	1.661509	GCGCACCAGTTTTGCCTTC	60.662	57.895	0.30	0.00	36.57	3.46
2370	4901	2.032981	CGCACCAGTTTTGCCTTCT	58.967	52.632	0.00	0.00	36.57	2.85
2371	4902	1.234821	CGCACCAGTTTTGCCTTCTA	58.765	50.000	0.00	0.00	36.57	2.10
2372	4903	1.606668	CGCACCAGTTTTGCCTTCTAA	59.393	47.619	0.00	0.00	36.57	2.10
2373	4904	2.228822	CGCACCAGTTTTGCCTTCTAAT	59.771	45.455	0.00	0.00	36.57	1.73
2374	4905	3.578688	GCACCAGTTTTGCCTTCTAATG	58.421	45.455	0.00	0.00	33.58	1.90
2375	4906	3.614870	GCACCAGTTTTGCCTTCTAATGG	60.615	47.826	0.00	0.00	33.58	3.16
2381	4912	4.225497	GCCTTCTAATGGCGCACT	57.775	55.556	10.83	0.00	41.03	4.40
2382	4913	3.379650	GCCTTCTAATGGCGCACTA	57.620	52.632	10.83	0.00	41.03	2.74
2383	4914	0.938008	GCCTTCTAATGGCGCACTAC	59.062	55.000	10.83	0.00	41.03	2.73
2384	4915	1.473434	GCCTTCTAATGGCGCACTACT	60.473	52.381	10.83	0.00	41.03	2.57
2385	4916	2.205074	CCTTCTAATGGCGCACTACTG	58.795	52.381	10.83	0.00	0.00	2.74
2386	4917	2.205074	CTTCTAATGGCGCACTACTGG	58.795	52.381	10.83	0.00	0.00	4.00
2387	4918	1.191535	TCTAATGGCGCACTACTGGT	58.808	50.000	10.83	0.00	0.00	4.00
2395	4926	2.343758	CACTACTGGTGCGCCACT	59.656	61.111	16.89	9.49	40.46	4.00
2396	4927	1.589630	CACTACTGGTGCGCCACTA	59.410	57.895	16.89	10.21	40.46	2.74
2397	4928	0.458543	CACTACTGGTGCGCCACTAG	60.459	60.000	23.61	23.61	46.13	2.57
2398	4929	1.519455	CTACTGGTGCGCCACTAGC	60.519	63.158	16.89	5.63	44.89	3.42
2399	4930	2.225791	CTACTGGTGCGCCACTAGCA	62.226	60.000	16.89	9.57	44.89	3.49
2400	4931	1.613317	TACTGGTGCGCCACTAGCAT	61.613	55.000	16.89	0.00	44.89	3.79
2401	4932	2.125147	TGGTGCGCCACTAGCATC	60.125	61.111	16.89	0.00	46.96	3.91
2402	4933	2.125147	GGTGCGCCACTAGCATCA	60.125	61.111	12.58	0.00	46.96	3.07
2403	4934	2.464459	GGTGCGCCACTAGCATCAC	61.464	63.158	12.58	0.00	46.96	3.06
2404	4935	2.509111	TGCGCCACTAGCATCACG	60.509	61.111	4.18	0.00	44.04	4.35
2405	4936	3.929948	GCGCCACTAGCATCACGC	61.930	66.667	0.00	0.00	44.04	5.34
2406	4937	3.264897	CGCCACTAGCATCACGCC	61.265	66.667	0.00	0.00	44.04	5.68
2407	4938	2.125147	GCCACTAGCATCACGCCA	60.125	61.111	0.00	0.00	44.04	5.69
2408	4939	1.524621	GCCACTAGCATCACGCCAT	60.525	57.895	0.00	0.00	44.04	4.40
2409	4940	1.097547	GCCACTAGCATCACGCCATT	61.098	55.000	0.00	0.00	44.04	3.16
2410	4941	1.810031	GCCACTAGCATCACGCCATTA	60.810	52.381	0.00	0.00	44.04	1.90
2411	4942	2.138320	CCACTAGCATCACGCCATTAG	58.862	52.381	0.00	0.00	44.04	1.73
2412	4943	2.224042	CCACTAGCATCACGCCATTAGA	60.224	50.000	0.00	0.00	44.04	2.10
2413	4944	3.457234	CACTAGCATCACGCCATTAGAA	58.543	45.455	0.00	0.00	44.04	2.10
2414	4945	4.060900	CACTAGCATCACGCCATTAGAAT	58.939	43.478	0.00	0.00	44.04	2.40
2415	4946	4.512944	CACTAGCATCACGCCATTAGAATT	59.487	41.667	0.00	0.00	44.04	2.17
2416	4947	5.696270	CACTAGCATCACGCCATTAGAATTA	59.304	40.000	0.00	0.00	44.04	1.40
2417	4948	6.202762	CACTAGCATCACGCCATTAGAATTAA	59.797	38.462	0.00	0.00	44.04	1.40
2418	4949	6.765989	ACTAGCATCACGCCATTAGAATTAAA	59.234	34.615	0.00	0.00	44.04	1.52
2419	4950	6.639632	AGCATCACGCCATTAGAATTAAAT	57.360	33.333	0.00	0.00	44.04	1.40
2420	4951	7.042797	AGCATCACGCCATTAGAATTAAATT	57.957	32.000	0.00	0.00	44.04	1.82
2421	4952	7.141363	AGCATCACGCCATTAGAATTAAATTC	58.859	34.615	0.00	0.00	44.04	2.17
2422	4953	7.013655	AGCATCACGCCATTAGAATTAAATTCT	59.986	33.333	0.00	0.00	46.52	2.40
2423	4954	8.289618	GCATCACGCCATTAGAATTAAATTCTA	58.710	33.333	0.00	0.00	41.60	2.10
2435	4966	7.755582	GAATTAAATTCTAATGGTGCACCAC	57.244	36.000	39.95	18.31	41.45	4.16
2436	4967	7.547227	GAATTAAATTCTAATGGTGCACCACT	58.453	34.615	39.95	32.56	41.45	4.00
2437	4968	7.489113	GAATTAAATTCTAATGGTGCACCACTG	59.511	37.037	39.95	29.25	41.45	3.66
2448	4979	2.753701	ACCACTGGTGCGCCATTA	59.246	55.556	21.54	0.00	45.05	1.90
2449	4980	1.377202	ACCACTGGTGCGCCATTAG	60.377	57.895	21.54	10.23	45.05	1.73
2450	4981	1.377202	CCACTGGTGCGCCATTAGT	60.377	57.895	21.54	11.93	45.05	2.24
2451	4982	0.107897	CCACTGGTGCGCCATTAGTA	60.108	55.000	21.54	0.00	45.05	1.82
2452	4983	1.475034	CCACTGGTGCGCCATTAGTAT	60.475	52.381	21.54	0.00	45.05	2.12
2453	4984	1.867233	CACTGGTGCGCCATTAGTATC	59.133	52.381	21.54	0.00	45.05	2.24
2454	4985	1.762957	ACTGGTGCGCCATTAGTATCT	59.237	47.619	21.54	0.00	45.05	1.98
2455	4986	2.138320	CTGGTGCGCCATTAGTATCTG	58.862	52.381	21.54	0.01	45.05	2.90
2456	4987	1.202639	TGGTGCGCCATTAGTATCTGG	60.203	52.381	16.89	0.00	40.46	3.86
2457	4988	1.202651	GGTGCGCCATTAGTATCTGGT	60.203	52.381	12.58	0.00	34.86	4.00
2458	4989	1.867233	GTGCGCCATTAGTATCTGGTG	59.133	52.381	4.18	7.98	44.21	4.17
2459	4990	1.484653	TGCGCCATTAGTATCTGGTGT	59.515	47.619	4.18	0.00	43.47	4.16
2460	4991	2.093181	TGCGCCATTAGTATCTGGTGTT	60.093	45.455	4.18	0.00	43.47	3.32
2461	4992	2.544267	GCGCCATTAGTATCTGGTGTTC	59.456	50.000	0.00	0.00	43.47	3.18
2462	4993	3.741388	GCGCCATTAGTATCTGGTGTTCT	60.741	47.826	0.00	0.00	43.47	3.01
2463	4994	4.500887	GCGCCATTAGTATCTGGTGTTCTA	60.501	45.833	0.00	0.00	43.47	2.10
2464	4995	5.597806	CGCCATTAGTATCTGGTGTTCTAA	58.402	41.667	5.17	0.00	38.07	2.10
2465	4996	6.223852	CGCCATTAGTATCTGGTGTTCTAAT	58.776	40.000	5.17	0.00	38.07	1.73
2466	4997	6.146184	CGCCATTAGTATCTGGTGTTCTAATG	59.854	42.308	13.08	13.08	43.13	1.90
2468	4999	7.426929	CATTAGTATCTGGTGTTCTAATGGC	57.573	40.000	12.51	0.00	41.44	4.40
2469	5000	4.060038	AGTATCTGGTGTTCTAATGGCG	57.940	45.455	0.00	0.00	0.00	5.69
2470	5001	1.668419	ATCTGGTGTTCTAATGGCGC	58.332	50.000	0.00	0.00	0.00	6.53
2471	5002	0.323302	TCTGGTGTTCTAATGGCGCA	59.677	50.000	10.83	0.00	0.00	6.09
2472	5003	0.447801	CTGGTGTTCTAATGGCGCAC	59.552	55.000	10.83	0.00	0.00	5.34
2473	5004	0.958382	TGGTGTTCTAATGGCGCACC	60.958	55.000	10.83	5.12	46.97	5.01
2487	5018	4.223800	CACCATGTAGTGCGCCAT	57.776	55.556	4.18	0.00	0.00	4.40
2488	5019	2.481212	CACCATGTAGTGCGCCATT	58.519	52.632	4.18	0.00	0.00	3.16
2489	5020	1.662517	CACCATGTAGTGCGCCATTA	58.337	50.000	4.18	0.00	0.00	1.90
2490	5021	1.599071	CACCATGTAGTGCGCCATTAG	59.401	52.381	4.18	0.00	0.00	1.73
2491	5022	1.209504	ACCATGTAGTGCGCCATTAGT	59.790	47.619	4.18	0.00	0.00	2.24
2492	5023	2.432874	ACCATGTAGTGCGCCATTAGTA	59.567	45.455	4.18	0.00	0.00	1.82
2493	5024	2.800544	CCATGTAGTGCGCCATTAGTAC	59.199	50.000	4.18	4.09	0.00	2.73
2494	5025	3.453424	CATGTAGTGCGCCATTAGTACA	58.547	45.455	13.56	13.56	37.19	2.90
2495	5026	3.159353	TGTAGTGCGCCATTAGTACAG	57.841	47.619	4.18	0.00	31.18	2.74
2496	5027	2.159156	TGTAGTGCGCCATTAGTACAGG	60.159	50.000	4.18	0.00	31.18	4.00
2497	5028	0.462047	AGTGCGCCATTAGTACAGGC	60.462	55.000	4.18	8.16	44.89	4.85
2498	5029	1.153249	TGCGCCATTAGTACAGGCC	60.153	57.895	4.18	0.00	45.56	5.19
2499	5030	1.153249	GCGCCATTAGTACAGGCCA	60.153	57.895	5.01	0.00	45.56	5.36
2500	5031	1.436983	GCGCCATTAGTACAGGCCAC	61.437	60.000	5.01	0.00	45.56	5.01
2501	5032	1.151777	CGCCATTAGTACAGGCCACG	61.152	60.000	5.01	0.00	45.56	4.94
2502	5033	0.814010	GCCATTAGTACAGGCCACGG	60.814	60.000	5.01	0.00	42.58	4.94
2503	5034	0.539986	CCATTAGTACAGGCCACGGT	59.460	55.000	5.01	2.16	0.00	4.83
2504	5035	1.651987	CATTAGTACAGGCCACGGTG	58.348	55.000	5.01	0.00	0.00	4.94
2505	5036	0.107848	ATTAGTACAGGCCACGGTGC	60.108	55.000	5.01	3.61	0.00	5.01
2506	5037	2.495366	TTAGTACAGGCCACGGTGCG	62.495	60.000	5.01	0.00	33.12	5.34
2513	5044	3.876198	GCCACGGTGCGCCATTAG	61.876	66.667	18.18	1.79	34.09	1.73
2514	5045	2.435938	CCACGGTGCGCCATTAGT	60.436	61.111	18.18	2.53	34.09	2.24
2515	5046	1.153529	CCACGGTGCGCCATTAGTA	60.154	57.895	18.18	0.00	34.09	1.82
2516	5047	0.531974	CCACGGTGCGCCATTAGTAT	60.532	55.000	18.18	0.00	34.09	2.12
2517	5048	1.295792	CACGGTGCGCCATTAGTATT	58.704	50.000	18.18	0.00	34.09	1.89
2518	5049	1.668751	CACGGTGCGCCATTAGTATTT	59.331	47.619	18.18	0.00	34.09	1.40
2519	5050	2.096819	CACGGTGCGCCATTAGTATTTT	59.903	45.455	18.18	0.00	34.09	1.82
2520	5051	2.750712	ACGGTGCGCCATTAGTATTTTT	59.249	40.909	18.18	0.00	34.09	1.94
2521	5052	3.105203	CGGTGCGCCATTAGTATTTTTG	58.895	45.455	18.18	0.00	34.09	2.44
2522	5053	3.181505	CGGTGCGCCATTAGTATTTTTGA	60.182	43.478	18.18	0.00	34.09	2.69
2523	5054	4.673061	CGGTGCGCCATTAGTATTTTTGAA	60.673	41.667	18.18	0.00	34.09	2.69
2524	5055	5.348164	GGTGCGCCATTAGTATTTTTGAAT	58.652	37.500	12.58	0.00	34.09	2.57
2525	5056	5.810074	GGTGCGCCATTAGTATTTTTGAATT	59.190	36.000	12.58	0.00	34.09	2.17
2526	5057	6.312672	GGTGCGCCATTAGTATTTTTGAATTT	59.687	34.615	12.58	0.00	34.09	1.82
2527	5058	7.148490	GGTGCGCCATTAGTATTTTTGAATTTT	60.148	33.333	12.58	0.00	34.09	1.82
2528	5059	7.687757	GTGCGCCATTAGTATTTTTGAATTTTG	59.312	33.333	4.18	0.00	0.00	2.44
2529	5060	7.600375	TGCGCCATTAGTATTTTTGAATTTTGA	59.400	29.630	4.18	0.00	0.00	2.69
2530	5061	8.439286	GCGCCATTAGTATTTTTGAATTTTGAA	58.561	29.630	0.00	0.00	0.00	2.69
2531	5062	9.956797	CGCCATTAGTATTTTTGAATTTTGAAG	57.043	29.630	0.00	0.00	0.00	3.02
2534	5065	9.956797	CATTAGTATTTTTGAATTTTGAAGGCG	57.043	29.630	0.00	0.00	0.00	5.52
2535	5066	8.527567	TTAGTATTTTTGAATTTTGAAGGCGG	57.472	30.769	0.00	0.00	0.00	6.13
2536	5067	5.931724	AGTATTTTTGAATTTTGAAGGCGGG	59.068	36.000	0.00	0.00	0.00	6.13
2537	5068	4.408182	TTTTTGAATTTTGAAGGCGGGA	57.592	36.364	0.00	0.00	0.00	5.14
2538	5069	4.408182	TTTTGAATTTTGAAGGCGGGAA	57.592	36.364	0.00	0.00	0.00	3.97
2539	5070	4.408182	TTTGAATTTTGAAGGCGGGAAA	57.592	36.364	0.00	0.00	0.00	3.13
2540	5071	4.408182	TTGAATTTTGAAGGCGGGAAAA	57.592	36.364	0.00	0.00	0.00	2.29
2541	5072	4.615588	TGAATTTTGAAGGCGGGAAAAT	57.384	36.364	0.00	0.00	32.01	1.82
2542	5073	5.730296	TGAATTTTGAAGGCGGGAAAATA	57.270	34.783	0.00	0.00	30.81	1.40
2543	5074	5.719173	TGAATTTTGAAGGCGGGAAAATAG	58.281	37.500	0.00	0.00	30.81	1.73
2544	5075	5.245075	TGAATTTTGAAGGCGGGAAAATAGT	59.755	36.000	0.00	0.00	30.81	2.12
2545	5076	6.434652	TGAATTTTGAAGGCGGGAAAATAGTA	59.565	34.615	0.00	0.00	30.81	1.82
2546	5077	5.890424	TTTTGAAGGCGGGAAAATAGTAG	57.110	39.130	0.00	0.00	0.00	2.57
2547	5078	4.563140	TTGAAGGCGGGAAAATAGTAGT	57.437	40.909	0.00	0.00	0.00	2.73
2548	5079	3.869065	TGAAGGCGGGAAAATAGTAGTG	58.131	45.455	0.00	0.00	0.00	2.74
2549	5080	3.203716	GAAGGCGGGAAAATAGTAGTGG	58.796	50.000	0.00	0.00	0.00	4.00
2550	5081	1.134189	AGGCGGGAAAATAGTAGTGGC	60.134	52.381	0.00	0.00	0.00	5.01
2551	5082	0.935196	GCGGGAAAATAGTAGTGGCG	59.065	55.000	0.00	0.00	0.00	5.69
2552	5083	0.935196	CGGGAAAATAGTAGTGGCGC	59.065	55.000	0.00	0.00	0.00	6.53
2553	5084	1.741055	CGGGAAAATAGTAGTGGCGCA	60.741	52.381	10.83	0.00	0.00	6.09
2554	5085	2.572290	GGGAAAATAGTAGTGGCGCAT	58.428	47.619	10.83	0.00	0.00	4.73
2555	5086	2.548480	GGGAAAATAGTAGTGGCGCATC	59.452	50.000	10.83	0.41	0.00	3.91
2556	5087	2.221055	GGAAAATAGTAGTGGCGCATCG	59.779	50.000	10.83	0.00	0.00	3.84
2557	5088	2.596904	AAATAGTAGTGGCGCATCGT	57.403	45.000	10.83	0.00	0.00	3.73
2558	5089	2.135664	AATAGTAGTGGCGCATCGTC	57.864	50.000	10.83	0.00	0.00	4.20
2559	5090	1.319541	ATAGTAGTGGCGCATCGTCT	58.680	50.000	10.83	4.24	30.55	4.18
2560	5091	1.957668	TAGTAGTGGCGCATCGTCTA	58.042	50.000	10.83	3.18	30.55	2.59
2561	5092	1.100510	AGTAGTGGCGCATCGTCTAA	58.899	50.000	10.83	0.00	30.55	2.10
2562	5093	1.197910	GTAGTGGCGCATCGTCTAAC	58.802	55.000	10.83	0.00	30.55	2.34
2563	5094	0.101759	TAGTGGCGCATCGTCTAACC	59.898	55.000	10.83	0.00	30.55	2.85
2564	5095	2.171725	GTGGCGCATCGTCTAACCC	61.172	63.158	10.83	0.00	30.55	4.11
2565	5096	2.588034	GGCGCATCGTCTAACCCC	60.588	66.667	10.83	0.00	0.00	4.95
2566	5097	2.588034	GCGCATCGTCTAACCCCC	60.588	66.667	0.30	0.00	0.00	5.40
2567	5098	2.897207	CGCATCGTCTAACCCCCA	59.103	61.111	0.00	0.00	0.00	4.96
2568	5099	1.520787	CGCATCGTCTAACCCCCAC	60.521	63.158	0.00	0.00	0.00	4.61
2569	5100	1.153229	GCATCGTCTAACCCCCACC	60.153	63.158	0.00	0.00	0.00	4.61
2570	5101	1.143183	CATCGTCTAACCCCCACCG	59.857	63.158	0.00	0.00	0.00	4.94
2571	5102	1.305549	ATCGTCTAACCCCCACCGT	60.306	57.895	0.00	0.00	0.00	4.83
2572	5103	1.610554	ATCGTCTAACCCCCACCGTG	61.611	60.000	0.00	0.00	0.00	4.94
2573	5104	2.046604	GTCTAACCCCCACCGTGC	60.047	66.667	0.00	0.00	0.00	5.34
2574	5105	3.697747	TCTAACCCCCACCGTGCG	61.698	66.667	0.00	0.00	0.00	5.34
2575	5106	4.011517	CTAACCCCCACCGTGCGT	62.012	66.667	0.00	0.00	0.00	5.24
2576	5107	3.945304	CTAACCCCCACCGTGCGTC	62.945	68.421	0.00	0.00	0.00	5.19
2579	5110	4.715523	CCCCCACCGTGCGTCATT	62.716	66.667	0.00	0.00	0.00	2.57
2580	5111	3.430862	CCCCACCGTGCGTCATTG	61.431	66.667	0.00	0.00	0.00	2.82
2581	5112	4.101790	CCCACCGTGCGTCATTGC	62.102	66.667	0.00	0.00	0.00	3.56
2582	5113	3.049674	CCACCGTGCGTCATTGCT	61.050	61.111	0.00	0.00	35.36	3.91
2583	5114	1.739929	CCACCGTGCGTCATTGCTA	60.740	57.895	0.00	0.00	35.36	3.49
2584	5115	1.089481	CCACCGTGCGTCATTGCTAT	61.089	55.000	0.00	0.00	35.36	2.97
2585	5116	0.726827	CACCGTGCGTCATTGCTATT	59.273	50.000	0.00	0.00	35.36	1.73
2586	5117	1.130373	CACCGTGCGTCATTGCTATTT	59.870	47.619	0.00	0.00	35.36	1.40
2587	5118	1.810151	ACCGTGCGTCATTGCTATTTT	59.190	42.857	0.00	0.00	35.36	1.82
2588	5119	2.227865	ACCGTGCGTCATTGCTATTTTT	59.772	40.909	0.00	0.00	35.36	1.94
2589	5120	2.593775	CCGTGCGTCATTGCTATTTTTG	59.406	45.455	0.00	0.00	35.36	2.44
2590	5121	3.487536	CGTGCGTCATTGCTATTTTTGA	58.512	40.909	0.00	0.00	35.36	2.69
2591	5122	3.911365	CGTGCGTCATTGCTATTTTTGAA	59.089	39.130	0.00	0.00	35.36	2.69
2592	5123	4.558470	CGTGCGTCATTGCTATTTTTGAAT	59.442	37.500	0.00	0.00	35.36	2.57
2593	5124	5.060816	CGTGCGTCATTGCTATTTTTGAATT	59.939	36.000	0.00	0.00	35.36	2.17
2594	5125	6.399880	CGTGCGTCATTGCTATTTTTGAATTT	60.400	34.615	0.00	0.00	35.36	1.82
2595	5126	7.290118	GTGCGTCATTGCTATTTTTGAATTTT	58.710	30.769	0.00	0.00	35.36	1.82
2596	5127	7.266756	GTGCGTCATTGCTATTTTTGAATTTTG	59.733	33.333	0.00	0.00	35.36	2.44
2597	5128	7.170489	TGCGTCATTGCTATTTTTGAATTTTGA	59.830	29.630	0.00	0.00	35.36	2.69
2598	5129	8.008844	GCGTCATTGCTATTTTTGAATTTTGAA	58.991	29.630	0.00	0.00	0.00	2.69
2610	5141	9.624373	TTTTTGAATTTTGAATTTGGATCTGGA	57.376	25.926	0.00	0.00	0.00	3.86
2611	5142	9.796180	TTTTGAATTTTGAATTTGGATCTGGAT	57.204	25.926	0.00	0.00	0.00	3.41
2612	5143	9.439500	TTTGAATTTTGAATTTGGATCTGGATC	57.561	29.630	2.24	2.24	37.11	3.36
2613	5144	7.259882	TGAATTTTGAATTTGGATCTGGATCG	58.740	34.615	4.75	0.00	38.69	3.69
2614	5145	4.637483	TTTGAATTTGGATCTGGATCGC	57.363	40.909	4.75	0.00	38.69	4.58
2615	5146	2.212652	TGAATTTGGATCTGGATCGCG	58.787	47.619	0.00	0.00	38.69	5.87
2616	5147	2.158971	TGAATTTGGATCTGGATCGCGA	60.159	45.455	13.09	13.09	38.69	5.87
2617	5148	2.847327	ATTTGGATCTGGATCGCGAT	57.153	45.000	23.97	23.97	38.69	4.58
2618	5149	2.620251	TTTGGATCTGGATCGCGATT	57.380	45.000	24.55	6.48	38.69	3.34
2619	5150	2.620251	TTGGATCTGGATCGCGATTT	57.380	45.000	24.55	1.31	38.69	2.17
2620	5151	2.620251	TGGATCTGGATCGCGATTTT	57.380	45.000	24.55	0.35	38.69	1.82
2621	5152	2.917933	TGGATCTGGATCGCGATTTTT	58.082	42.857	24.55	0.00	38.69	1.94
2672	5203	9.081997	TGCACGATATTATTTCAAATTTGTTCC	57.918	29.630	17.47	0.00	0.00	3.62
2673	5204	8.539674	GCACGATATTATTTCAAATTTGTTCCC	58.460	33.333	17.47	0.00	0.00	3.97
2674	5205	8.742188	CACGATATTATTTCAAATTTGTTCCCG	58.258	33.333	17.47	11.53	0.00	5.14
2675	5206	8.463607	ACGATATTATTTCAAATTTGTTCCCGT	58.536	29.630	17.47	12.04	0.00	5.28
2676	5207	9.296400	CGATATTATTTCAAATTTGTTCCCGTT	57.704	29.630	17.47	2.57	0.00	4.44
2680	5211	9.943163	ATTATTTCAAATTTGTTCCCGTTTTTG	57.057	25.926	17.47	0.00	0.00	2.44
2681	5212	5.803020	TTCAAATTTGTTCCCGTTTTTGG	57.197	34.783	17.47	0.00	0.00	3.28
2682	5213	5.086104	TCAAATTTGTTCCCGTTTTTGGA	57.914	34.783	17.47	0.00	0.00	3.53
2683	5214	5.675538	TCAAATTTGTTCCCGTTTTTGGAT	58.324	33.333	17.47	0.00	0.00	3.41
2684	5215	5.755861	TCAAATTTGTTCCCGTTTTTGGATC	59.244	36.000	17.47	0.00	0.00	3.36
2685	5216	5.545063	AATTTGTTCCCGTTTTTGGATCT	57.455	34.783	0.00	0.00	0.00	2.75
2686	5217	5.545063	ATTTGTTCCCGTTTTTGGATCTT	57.455	34.783	0.00	0.00	0.00	2.40
2687	5218	4.314740	TTGTTCCCGTTTTTGGATCTTG	57.685	40.909	0.00	0.00	0.00	3.02
2688	5219	3.292460	TGTTCCCGTTTTTGGATCTTGT	58.708	40.909	0.00	0.00	0.00	3.16
2689	5220	4.462133	TGTTCCCGTTTTTGGATCTTGTA	58.538	39.130	0.00	0.00	0.00	2.41
2690	5221	4.276431	TGTTCCCGTTTTTGGATCTTGTAC	59.724	41.667	0.00	0.00	0.00	2.90
2691	5222	3.068560	TCCCGTTTTTGGATCTTGTACG	58.931	45.455	0.00	0.00	0.00	3.67
2692	5223	2.809696	CCCGTTTTTGGATCTTGTACGT	59.190	45.455	0.00	0.00	0.00	3.57
2693	5224	3.251487	CCCGTTTTTGGATCTTGTACGTT	59.749	43.478	0.00	0.00	0.00	3.99
2694	5225	4.460505	CCGTTTTTGGATCTTGTACGTTC	58.539	43.478	0.00	0.00	0.00	3.95
2695	5226	4.212636	CCGTTTTTGGATCTTGTACGTTCT	59.787	41.667	0.00	0.00	0.00	3.01
2696	5227	5.277634	CCGTTTTTGGATCTTGTACGTTCTT	60.278	40.000	0.00	0.00	0.00	2.52
2697	5228	6.196571	CGTTTTTGGATCTTGTACGTTCTTT	58.803	36.000	0.00	0.00	0.00	2.52
2698	5229	6.689669	CGTTTTTGGATCTTGTACGTTCTTTT	59.310	34.615	0.00	0.00	0.00	2.27
2699	5230	7.305190	CGTTTTTGGATCTTGTACGTTCTTTTG	60.305	37.037	0.00	0.00	0.00	2.44
2700	5231	6.928979	TTTGGATCTTGTACGTTCTTTTGA	57.071	33.333	0.00	0.00	0.00	2.69
2701	5232	5.917541	TGGATCTTGTACGTTCTTTTGAC	57.082	39.130	0.00	0.00	0.00	3.18
2702	5233	4.446385	TGGATCTTGTACGTTCTTTTGACG	59.554	41.667	0.00	0.00	0.00	4.35
2703	5234	4.446719	GGATCTTGTACGTTCTTTTGACGT	59.553	41.667	7.46	7.46	38.75	4.34
2704	5235	5.630680	GGATCTTGTACGTTCTTTTGACGTA	59.369	40.000	0.00	5.51	37.38	3.57

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
2	3	3.458487	GGGGGAGTGTTGGACTATAATGT	59.542	47.826	0.00	0.00	33.83	2.71
3	4	3.716872	AGGGGGAGTGTTGGACTATAATG	59.283	47.826	0.00	0.00	33.83	1.90
4	5	3.974642	GAGGGGGAGTGTTGGACTATAAT	59.025	47.826	0.00	0.00	33.83	1.28
10	68	1.375326	GTGAGGGGGAGTGTTGGAC	59.625	63.158	0.00	0.00	0.00	4.02
15	73	0.335361	ATAGACGTGAGGGGGAGTGT	59.665	55.000	0.00	0.00	0.00	3.55
59	117	4.564110	GCCCCCGCTTCCGCTATT	62.564	66.667	0.00	0.00	0.00	1.73
88	146	6.570692	TCAAAACCCAGTAAACGCAATAAAA	58.429	32.000	0.00	0.00	0.00	1.52
206	264	2.923035	ACACGTGAGGGGGAGTGG	60.923	66.667	25.01	0.00	40.46	4.00
243	301	0.462759	GCAGCCCACTATCAGTCCAC	60.463	60.000	0.00	0.00	0.00	4.02
249	307	5.904941	CAATTAAATTGCAGCCCACTATCA	58.095	37.500	0.00	0.00	32.92	2.15
276	334	2.432628	GAGTTCACGACCCGGCTG	60.433	66.667	0.00	0.00	0.00	4.85
278	336	2.027625	CTTGAGTTCACGACCCGGC	61.028	63.158	0.00	0.00	0.00	6.13
279	337	0.032952	TTCTTGAGTTCACGACCCGG	59.967	55.000	0.00	0.00	0.00	5.73
280	338	1.137513	GTTCTTGAGTTCACGACCCG	58.862	55.000	0.00	0.00	0.00	5.28
281	339	2.036089	AGAGTTCTTGAGTTCACGACCC	59.964	50.000	0.00	0.00	0.00	4.46
294	352	2.168728	GGTATCGGAGCCAAGAGTTCTT	59.831	50.000	0.00	0.00	36.45	2.52
296	354	1.480954	TGGTATCGGAGCCAAGAGTTC	59.519	52.381	2.13	0.00	0.00	3.01
297	355	1.568504	TGGTATCGGAGCCAAGAGTT	58.431	50.000	2.13	0.00	0.00	3.01
298	356	1.414181	CATGGTATCGGAGCCAAGAGT	59.586	52.381	7.94	0.00	38.38	3.24
299	357	1.414181	ACATGGTATCGGAGCCAAGAG	59.586	52.381	11.73	6.85	38.38	2.85
301	359	2.628178	TCTACATGGTATCGGAGCCAAG	59.372	50.000	7.94	6.62	38.38	3.61
303	361	2.375014	TCTACATGGTATCGGAGCCA	57.625	50.000	6.55	6.55	39.33	4.75
305	363	3.643763	CACTTCTACATGGTATCGGAGC	58.356	50.000	0.00	0.00	0.00	4.70
306	364	3.068165	TGCACTTCTACATGGTATCGGAG	59.932	47.826	0.00	0.00	0.00	4.63
308	366	3.452755	TGCACTTCTACATGGTATCGG	57.547	47.619	0.00	0.00	0.00	4.18
310	368	4.739046	GCATGCACTTCTACATGGTATC	57.261	45.455	14.21	0.00	43.13	2.24
313	371	2.795231	AGCATGCACTTCTACATGGT	57.205	45.000	21.98	2.10	46.94	3.55
314	372	2.915349	AGAGCATGCACTTCTACATGG	58.085	47.619	21.98	0.00	43.13	3.66
315	373	3.493877	GCTAGAGCATGCACTTCTACATG	59.506	47.826	22.83	8.90	45.19	3.21
316	374	3.494048	GGCTAGAGCATGCACTTCTACAT	60.494	47.826	22.83	0.00	44.36	2.29
317	375	2.159043	GGCTAGAGCATGCACTTCTACA	60.159	50.000	22.83	3.70	44.36	2.74
318	376	2.159043	TGGCTAGAGCATGCACTTCTAC	60.159	50.000	22.83	12.67	44.36	2.59
319	377	2.110578	TGGCTAGAGCATGCACTTCTA	58.889	47.619	22.83	17.21	44.36	2.10
320	378	0.907486	TGGCTAGAGCATGCACTTCT	59.093	50.000	22.83	17.00	44.36	2.85
321	379	1.742761	TTGGCTAGAGCATGCACTTC	58.257	50.000	22.83	14.30	44.36	3.01
322	380	2.431954	ATTGGCTAGAGCATGCACTT	57.568	45.000	22.83	8.33	44.36	3.16
323	381	2.171237	TGTATTGGCTAGAGCATGCACT	59.829	45.455	21.45	21.45	44.36	4.40
324	382	2.564771	TGTATTGGCTAGAGCATGCAC	58.435	47.619	21.98	14.59	44.36	4.57
325	383	2.945008	GTTGTATTGGCTAGAGCATGCA	59.055	45.455	21.98	0.00	44.36	3.96
326	384	2.945008	TGTTGTATTGGCTAGAGCATGC	59.055	45.455	10.51	10.51	44.36	4.06
327	385	6.866010	TTATGTTGTATTGGCTAGAGCATG	57.134	37.500	3.54	0.00	44.36	4.06
328	386	7.227512	GTCTTTATGTTGTATTGGCTAGAGCAT	59.772	37.037	3.54	0.00	44.36	3.79
329	387	6.538742	GTCTTTATGTTGTATTGGCTAGAGCA	59.461	38.462	3.54	0.00	44.36	4.26
330	388	6.017852	GGTCTTTATGTTGTATTGGCTAGAGC	60.018	42.308	0.00	0.00	41.14	4.09
331	389	6.201044	CGGTCTTTATGTTGTATTGGCTAGAG	59.799	42.308	0.00	0.00	0.00	2.43
332	390	6.046593	CGGTCTTTATGTTGTATTGGCTAGA	58.953	40.000	0.00	0.00	0.00	2.43
333	391	6.046593	TCGGTCTTTATGTTGTATTGGCTAG	58.953	40.000	0.00	0.00	0.00	3.42
334	392	5.979993	TCGGTCTTTATGTTGTATTGGCTA	58.020	37.500	0.00	0.00	0.00	3.93
335	393	4.839121	TCGGTCTTTATGTTGTATTGGCT	58.161	39.130	0.00	0.00	0.00	4.75
336	394	5.558273	CGATCGGTCTTTATGTTGTATTGGC	60.558	44.000	7.38	0.00	0.00	4.52
337	395	5.522460	ACGATCGGTCTTTATGTTGTATTGG	59.478	40.000	20.98	0.00	0.00	3.16
338	396	6.410845	CACGATCGGTCTTTATGTTGTATTG	58.589	40.000	20.98	0.00	0.00	1.90
339	397	5.522460	CCACGATCGGTCTTTATGTTGTATT	59.478	40.000	20.98	0.00	0.00	1.89
340	398	5.047847	CCACGATCGGTCTTTATGTTGTAT	58.952	41.667	20.98	0.00	0.00	2.29
341	399	4.426416	CCACGATCGGTCTTTATGTTGTA	58.574	43.478	20.98	0.00	0.00	2.41
342	400	3.259064	CCACGATCGGTCTTTATGTTGT	58.741	45.455	20.98	0.00	0.00	3.32
343	401	2.607635	CCCACGATCGGTCTTTATGTTG	59.392	50.000	20.98	4.06	0.00	3.33
344	402	2.901249	CCCACGATCGGTCTTTATGTT	58.099	47.619	20.98	0.00	0.00	2.71
345	403	1.472728	GCCCACGATCGGTCTTTATGT	60.473	52.381	20.98	0.00	0.00	2.29
346	404	1.202533	AGCCCACGATCGGTCTTTATG	60.203	52.381	20.98	6.36	0.00	1.90
347	405	1.120530	AGCCCACGATCGGTCTTTAT	58.879	50.000	20.98	0.00	0.00	1.40
348	406	0.174845	CAGCCCACGATCGGTCTTTA	59.825	55.000	20.98	0.00	0.00	1.85
349	407	1.079127	CAGCCCACGATCGGTCTTT	60.079	57.895	20.98	0.00	0.00	2.52
350	408	2.579201	CAGCCCACGATCGGTCTT	59.421	61.111	20.98	0.00	0.00	3.01
351	409	4.148825	GCAGCCCACGATCGGTCT	62.149	66.667	20.98	7.42	0.00	3.85
352	410	3.950794	TTGCAGCCCACGATCGGTC	62.951	63.158	20.98	5.12	0.00	4.79
353	411	2.819984	AATTGCAGCCCACGATCGGT	62.820	55.000	20.98	1.94	0.00	4.69
354	412	1.656818	AAATTGCAGCCCACGATCGG	61.657	55.000	20.98	8.32	0.00	4.18
355	413	0.171007	AAAATTGCAGCCCACGATCG	59.829	50.000	14.88	14.88	0.00	3.69
356	414	3.502191	TTAAAATTGCAGCCCACGATC	57.498	42.857	0.00	0.00	0.00	3.69
357	415	4.183101	CAATTAAAATTGCAGCCCACGAT	58.817	39.130	2.68	0.00	39.29	3.73
358	416	3.583806	CAATTAAAATTGCAGCCCACGA	58.416	40.909	2.68	0.00	39.29	4.35
359	417	3.995412	CAATTAAAATTGCAGCCCACG	57.005	42.857	2.68	0.00	39.29	4.94
368	426	1.324134	CGGCTGGCGCAATTAAAATTG	59.676	47.619	11.55	10.43	46.55	2.32
369	427	1.639280	CGGCTGGCGCAATTAAAATT	58.361	45.000	11.55	0.00	38.10	1.82
370	428	0.179113	CCGGCTGGCGCAATTAAAAT	60.179	50.000	18.95	0.00	38.10	1.82
371	429	1.214062	CCGGCTGGCGCAATTAAAA	59.786	52.632	18.95	0.00	38.10	1.52
372	430	2.705821	CCCGGCTGGCGCAATTAAA	61.706	57.895	18.95	0.00	38.10	1.52
373	431	3.137459	CCCGGCTGGCGCAATTAA	61.137	61.111	18.95	0.00	38.10	1.40
374	432	4.418328	ACCCGGCTGGCGCAATTA	62.418	61.111	18.95	0.00	37.83	1.40
416	474	4.129380	GCATGCACTTCTACATGGTATCA	58.871	43.478	14.21	0.00	43.13	2.15
459	517	0.397816	CCCTCTCCCTCAGATCGGTT	60.398	60.000	0.00	0.00	0.00	4.44
468	531	0.688087	AATGTCCGACCCTCTCCCTC	60.688	60.000	0.00	0.00	0.00	4.30
471	534	3.498334	AGTATAATGTCCGACCCTCTCC	58.502	50.000	0.00	0.00	0.00	3.71
479	542	4.098960	GGAGTGTTGGAGTATAATGTCCGA	59.901	45.833	0.00	0.00	35.37	4.55
482	545	4.444449	GGGGGAGTGTTGGAGTATAATGTC	60.444	50.000	0.00	0.00	0.00	3.06
524	587	0.679505	TGCCCACGTCATATAGCTCC	59.320	55.000	0.00	0.00	0.00	4.70
525	588	1.937108	GCTGCCCACGTCATATAGCTC	60.937	57.143	0.00	0.00	0.00	4.09
526	589	0.034059	GCTGCCCACGTCATATAGCT	59.966	55.000	0.00	0.00	0.00	3.32
527	590	1.284982	CGCTGCCCACGTCATATAGC	61.285	60.000	0.00	0.00	0.00	2.97
528	591	0.667487	CCGCTGCCCACGTCATATAG	60.667	60.000	0.00	0.00	0.00	1.31
529	592	1.110518	TCCGCTGCCCACGTCATATA	61.111	55.000	0.00	0.00	0.00	0.86
530	593	1.966901	TTCCGCTGCCCACGTCATAT	61.967	55.000	0.00	0.00	0.00	1.78
531	594	2.572095	CTTCCGCTGCCCACGTCATA	62.572	60.000	0.00	0.00	0.00	2.15
532	595	3.958147	CTTCCGCTGCCCACGTCAT	62.958	63.158	0.00	0.00	0.00	3.06
533	596	4.680237	CTTCCGCTGCCCACGTCA	62.680	66.667	0.00	0.00	0.00	4.35
552	615	1.778017	AAAAATTGTGGCCTGCCCCC	61.778	55.000	3.32	0.00	34.56	5.40
553	616	1.760527	AAAAATTGTGGCCTGCCCC	59.239	52.632	3.32	0.00	34.56	5.80
568	631	9.798994	TTCAAAACCTAGTAAACGCAATAAAAA	57.201	25.926	0.00	0.00	0.00	1.94
569	632	9.235537	GTTCAAAACCTAGTAAACGCAATAAAA	57.764	29.630	0.00	0.00	0.00	1.52
570	633	8.785468	GTTCAAAACCTAGTAAACGCAATAAA	57.215	30.769	0.00	0.00	0.00	1.40
587	650	3.068165	CCAAGAGGTTCAGGGTTCAAAAC	59.932	47.826	0.00	0.00	0.00	2.43
588	651	3.295973	CCAAGAGGTTCAGGGTTCAAAA	58.704	45.455	0.00	0.00	0.00	2.44
589	652	2.944129	CCAAGAGGTTCAGGGTTCAAA	58.056	47.619	0.00	0.00	0.00	2.69
590	653	2.656947	CCAAGAGGTTCAGGGTTCAA	57.343	50.000	0.00	0.00	0.00	2.69
602	665	5.335661	GGTGCATAAACTTACAACCAAGAGG	60.336	44.000	0.00	0.00	42.21	3.69
603	666	5.473504	AGGTGCATAAACTTACAACCAAGAG	59.526	40.000	0.00	0.00	0.00	2.85
604	667	5.381757	AGGTGCATAAACTTACAACCAAGA	58.618	37.500	0.00	0.00	0.00	3.02
605	668	5.705609	AGGTGCATAAACTTACAACCAAG	57.294	39.130	0.00	0.00	0.00	3.61
606	669	6.016108	GGTTAGGTGCATAAACTTACAACCAA	60.016	38.462	0.00	0.00	0.00	3.67
607	670	5.474189	GGTTAGGTGCATAAACTTACAACCA	59.526	40.000	0.00	0.00	0.00	3.67
608	671	5.474189	TGGTTAGGTGCATAAACTTACAACC	59.526	40.000	0.00	0.00	0.00	3.77
609	672	6.206048	ACTGGTTAGGTGCATAAACTTACAAC	59.794	38.462	0.00	0.00	0.00	3.32
610	673	6.300703	ACTGGTTAGGTGCATAAACTTACAA	58.699	36.000	0.00	0.00	0.00	2.41
611	674	5.871834	ACTGGTTAGGTGCATAAACTTACA	58.128	37.500	0.00	0.00	0.00	2.41
612	675	6.428771	TGAACTGGTTAGGTGCATAAACTTAC	59.571	38.462	0.00	0.00	0.00	2.34
613	676	6.535540	TGAACTGGTTAGGTGCATAAACTTA	58.464	36.000	0.00	0.00	0.00	2.24
614	677	5.381757	TGAACTGGTTAGGTGCATAAACTT	58.618	37.500	0.00	0.00	0.00	2.66
615	678	4.980573	TGAACTGGTTAGGTGCATAAACT	58.019	39.130	0.00	0.00	0.00	2.66
616	679	5.163652	GGATGAACTGGTTAGGTGCATAAAC	60.164	44.000	0.00	0.00	33.49	2.01
617	680	4.947388	GGATGAACTGGTTAGGTGCATAAA	59.053	41.667	0.00	0.00	33.49	1.40
618	681	4.018870	TGGATGAACTGGTTAGGTGCATAA	60.019	41.667	0.00	0.00	33.49	1.90
619	682	3.521531	TGGATGAACTGGTTAGGTGCATA	59.478	43.478	0.00	0.00	33.49	3.14
620	683	2.308570	TGGATGAACTGGTTAGGTGCAT	59.691	45.455	0.00	0.00	35.81	3.96
621	684	1.702401	TGGATGAACTGGTTAGGTGCA	59.298	47.619	0.00	0.00	0.00	4.57
622	685	2.489938	TGGATGAACTGGTTAGGTGC	57.510	50.000	0.00	0.00	0.00	5.01
623	686	5.989477	TCTTATGGATGAACTGGTTAGGTG	58.011	41.667	0.00	0.00	0.00	4.00
624	687	6.463049	CGATCTTATGGATGAACTGGTTAGGT	60.463	42.308	0.00	0.00	34.33	3.08
625	688	5.928839	CGATCTTATGGATGAACTGGTTAGG	59.071	44.000	0.00	0.00	34.33	2.69
626	689	6.749139	TCGATCTTATGGATGAACTGGTTAG	58.251	40.000	0.00	0.00	34.33	2.34
627	690	6.724893	TCGATCTTATGGATGAACTGGTTA	57.275	37.500	0.00	0.00	34.33	2.85
628	691	5.614324	TCGATCTTATGGATGAACTGGTT	57.386	39.130	0.00	0.00	34.33	3.67
629	692	5.541868	AGATCGATCTTATGGATGAACTGGT	59.458	40.000	22.32	0.00	34.33	4.00
630	693	5.868258	CAGATCGATCTTATGGATGAACTGG	59.132	44.000	25.25	5.29	34.22	4.00
631	694	6.685657	TCAGATCGATCTTATGGATGAACTG	58.314	40.000	25.25	10.25	35.88	3.16
632	695	6.907853	TCAGATCGATCTTATGGATGAACT	57.092	37.500	25.25	0.00	34.22	3.01
633	696	7.522901	CATCAGATCGATCTTATGGATGAAC	57.477	40.000	30.98	5.89	36.49	3.18
640	703	7.028962	GTCTCTTCCATCAGATCGATCTTATG	58.971	42.308	30.26	30.26	37.94	1.90
641	704	6.947733	AGTCTCTTCCATCAGATCGATCTTAT	59.052	38.462	25.25	19.71	34.22	1.73
642	705	6.303054	AGTCTCTTCCATCAGATCGATCTTA	58.697	40.000	25.25	18.23	34.22	2.10
643	706	5.139727	AGTCTCTTCCATCAGATCGATCTT	58.860	41.667	25.25	9.56	34.22	2.40
644	707	4.728772	AGTCTCTTCCATCAGATCGATCT	58.271	43.478	22.32	22.32	37.72	2.75
645	708	5.123820	CCTAGTCTCTTCCATCAGATCGATC	59.876	48.000	17.91	17.91	29.21	3.69
646	709	5.009631	CCTAGTCTCTTCCATCAGATCGAT	58.990	45.833	0.00	0.00	33.27	3.59
647	710	4.393834	CCTAGTCTCTTCCATCAGATCGA	58.606	47.826	0.00	0.00	0.00	3.59
648	711	3.057596	GCCTAGTCTCTTCCATCAGATCG	60.058	52.174	0.00	0.00	0.00	3.69
649	712	3.894427	TGCCTAGTCTCTTCCATCAGATC	59.106	47.826	0.00	0.00	0.00	2.75
650	713	3.896888	CTGCCTAGTCTCTTCCATCAGAT	59.103	47.826	0.00	0.00	0.00	2.90
651	714	3.295093	CTGCCTAGTCTCTTCCATCAGA	58.705	50.000	0.00	0.00	0.00	3.27
652	715	2.224018	GCTGCCTAGTCTCTTCCATCAG	60.224	54.545	0.00	0.00	0.00	2.90
653	716	1.759445	GCTGCCTAGTCTCTTCCATCA	59.241	52.381	0.00	0.00	0.00	3.07
654	717	1.759445	TGCTGCCTAGTCTCTTCCATC	59.241	52.381	0.00	0.00	0.00	3.51
655	718	1.871418	TGCTGCCTAGTCTCTTCCAT	58.129	50.000	0.00	0.00	0.00	3.41
656	719	1.871418	ATGCTGCCTAGTCTCTTCCA	58.129	50.000	0.00	0.00	0.00	3.53
657	720	4.615588	AATATGCTGCCTAGTCTCTTCC	57.384	45.455	0.00	0.00	0.00	3.46
658	721	7.437862	GCATATAATATGCTGCCTAGTCTCTTC	59.562	40.741	0.00	0.00	41.52	2.87
659	722	7.271511	GCATATAATATGCTGCCTAGTCTCTT	58.728	38.462	0.00	0.00	41.52	2.85
660	723	6.815089	GCATATAATATGCTGCCTAGTCTCT	58.185	40.000	0.00	0.00	41.52	3.10
669	732	5.375417	TGTGTTGGCATATAATATGCTGC	57.625	39.130	0.10	10.32	44.02	5.25
670	733	6.859508	CAGTTGTGTTGGCATATAATATGCTG	59.140	38.462	0.10	2.02	44.02	4.41
671	734	6.772233	TCAGTTGTGTTGGCATATAATATGCT	59.228	34.615	0.10	0.00	44.02	3.79
672	735	6.969366	TCAGTTGTGTTGGCATATAATATGC	58.031	36.000	0.00	0.00	43.85	3.14
675	738	9.489084	GAGTATCAGTTGTGTTGGCATATAATA	57.511	33.333	0.00	0.00	33.17	0.98
676	739	7.171508	CGAGTATCAGTTGTGTTGGCATATAAT	59.828	37.037	0.00	0.00	33.17	1.28
677	740	6.478673	CGAGTATCAGTTGTGTTGGCATATAA	59.521	38.462	0.00	0.00	33.17	0.98
678	741	5.983118	CGAGTATCAGTTGTGTTGGCATATA	59.017	40.000	0.00	0.00	33.17	0.86
679	742	4.811024	CGAGTATCAGTTGTGTTGGCATAT	59.189	41.667	0.00	0.00	33.17	1.78
680	743	4.081917	TCGAGTATCAGTTGTGTTGGCATA	60.082	41.667	0.00	0.00	33.17	3.14
681	744	3.002791	CGAGTATCAGTTGTGTTGGCAT	58.997	45.455	0.00	0.00	33.17	4.40
682	745	2.036604	TCGAGTATCAGTTGTGTTGGCA	59.963	45.455	0.00	0.00	33.17	4.92
683	746	2.668457	CTCGAGTATCAGTTGTGTTGGC	59.332	50.000	3.62	0.00	33.17	4.52
684	747	4.082733	TCTCTCGAGTATCAGTTGTGTTGG	60.083	45.833	13.13	0.00	33.17	3.77
685	748	5.048153	TCTCTCGAGTATCAGTTGTGTTG	57.952	43.478	13.13	0.00	33.17	3.33
686	749	4.380023	GCTCTCTCGAGTATCAGTTGTGTT	60.380	45.833	13.13	0.00	39.53	3.32
687	750	3.127895	GCTCTCTCGAGTATCAGTTGTGT	59.872	47.826	13.13	0.00	39.53	3.72
688	751	3.376859	AGCTCTCTCGAGTATCAGTTGTG	59.623	47.826	13.13	0.00	39.53	3.33
689	752	3.616219	AGCTCTCTCGAGTATCAGTTGT	58.384	45.455	13.13	0.00	39.53	3.32
690	753	3.625313	TGAGCTCTCTCGAGTATCAGTTG	59.375	47.826	16.19	2.00	42.26	3.16
691	754	3.876914	CTGAGCTCTCTCGAGTATCAGTT	59.123	47.826	16.19	2.30	42.26	3.16
692	755	3.466836	CTGAGCTCTCTCGAGTATCAGT	58.533	50.000	16.19	0.00	42.26	3.41
693	756	2.224079	GCTGAGCTCTCTCGAGTATCAG	59.776	54.545	16.19	17.97	45.71	2.90
694	757	2.158827	AGCTGAGCTCTCTCGAGTATCA	60.159	50.000	16.19	9.44	42.26	2.15
695	758	2.494059	AGCTGAGCTCTCTCGAGTATC	58.506	52.381	16.19	5.39	42.26	2.24
696	759	2.638480	AGCTGAGCTCTCTCGAGTAT	57.362	50.000	16.19	0.00	42.26	2.12
697	760	2.411628	AAGCTGAGCTCTCTCGAGTA	57.588	50.000	16.19	1.01	42.26	2.59
698	761	2.288666	CTAAGCTGAGCTCTCTCGAGT	58.711	52.381	16.19	0.00	42.26	4.18
699	762	1.002468	GCTAAGCTGAGCTCTCTCGAG	60.002	57.143	16.54	5.93	42.26	4.04
700	763	1.021202	GCTAAGCTGAGCTCTCTCGA	58.979	55.000	16.54	3.65	42.26	4.04
701	764	3.549997	GCTAAGCTGAGCTCTCTCG	57.450	57.895	16.54	8.03	42.26	4.04
708	771	1.540797	CCCATCTGAGCTAAGCTGAGC	60.541	57.143	16.05	16.05	39.63	4.26
709	772	2.037901	TCCCATCTGAGCTAAGCTGAG	58.962	52.381	3.29	0.00	41.09	3.35
710	773	2.165357	TCCCATCTGAGCTAAGCTGA	57.835	50.000	3.29	0.00	39.88	4.26
711	774	2.633967	AGATCCCATCTGAGCTAAGCTG	59.366	50.000	0.00	0.00	36.33	4.24
712	775	2.975075	AGATCCCATCTGAGCTAAGCT	58.025	47.619	0.00	0.00	38.44	3.74
713	776	3.767902	AAGATCCCATCTGAGCTAAGC	57.232	47.619	0.00	0.00	40.13	3.09
714	777	7.548780	GCTTATAAAGATCCCATCTGAGCTAAG	59.451	40.741	0.00	0.00	40.13	2.18
715	778	7.390027	GCTTATAAAGATCCCATCTGAGCTAA	58.610	38.462	0.00	0.00	40.13	3.09
716	779	6.070538	GGCTTATAAAGATCCCATCTGAGCTA	60.071	42.308	0.00	0.00	40.13	3.32
724	787	4.729552	TGCTGGCTTATAAAGATCCCAT	57.270	40.909	0.00	0.00	0.00	4.00
759	822	1.134818	GGTGTGTGTGTCTGTGTCTGA	60.135	52.381	0.00	0.00	0.00	3.27
760	823	1.290203	GGTGTGTGTGTCTGTGTCTG	58.710	55.000	0.00	0.00	0.00	3.51
762	825	1.396996	GTTGGTGTGTGTGTCTGTGTC	59.603	52.381	0.00	0.00	0.00	3.67
765	828	0.326595	TGGTTGGTGTGTGTGTCTGT	59.673	50.000	0.00	0.00	0.00	3.41
768	831	0.951558	GGATGGTTGGTGTGTGTGTC	59.048	55.000	0.00	0.00	0.00	3.67
769	832	0.550914	AGGATGGTTGGTGTGTGTGT	59.449	50.000	0.00	0.00	0.00	3.72
772	835	1.979855	TTGAGGATGGTTGGTGTGTG	58.020	50.000	0.00	0.00	0.00	3.82
773	836	2.586425	CTTTGAGGATGGTTGGTGTGT	58.414	47.619	0.00	0.00	0.00	3.72
817	884	2.600769	AGGGAAGGAGACGCACGT	60.601	61.111	0.00	0.00	0.00	4.49
820	887	0.967887	CTGAGAGGGAAGGAGACGCA	60.968	60.000	0.00	0.00	0.00	5.24
858	949	2.126580	GACAACGGAGCGCGTACT	60.127	61.111	8.43	0.00	0.00	2.73
860	951	3.933900	GACGACAACGGAGCGCGTA	62.934	63.158	8.43	0.00	44.46	4.42
872	963	3.376078	GCCCGTGGTAGGACGACA	61.376	66.667	0.00	0.00	42.10	4.35
915	1006	0.179000	GATGAGCGAGGATTGGGTGT	59.821	55.000	0.00	0.00	0.00	4.16
921	1012	1.137872	GTGTGGAGATGAGCGAGGATT	59.862	52.381	0.00	0.00	0.00	3.01
927	1018	1.448540	GTGGGTGTGGAGATGAGCG	60.449	63.158	0.00	0.00	0.00	5.03
930	1021	0.911769	GGATGTGGGTGTGGAGATGA	59.088	55.000	0.00	0.00	0.00	2.92
933	1024	2.954684	GCGGATGTGGGTGTGGAGA	61.955	63.158	0.00	0.00	0.00	3.71
1108	1199	0.178891	AGAAAGGAGTCCAGGAGGCA	60.179	55.000	12.86	0.00	33.74	4.75
1161	1252	1.303888	CTTGAGCACCACCATGGCT	60.304	57.895	13.04	1.63	42.67	4.75
1261	1395	2.125269	CGCGAATTCCTTCCCGGT	60.125	61.111	0.00	0.00	30.77	5.28
1502	1636	5.061179	TCTTCTTTTTCTTCGTTACCAGGG	58.939	41.667	0.00	0.00	0.00	4.45
1509	1643	3.626217	ACGCCTTCTTCTTTTTCTTCGTT	59.374	39.130	0.00	0.00	0.00	3.85
1553	1690	4.514577	CCACAGGTAGCTCCGCCG	62.515	72.222	0.00	0.00	41.99	6.46
1556	1693	2.185350	CAGCCACAGGTAGCTCCG	59.815	66.667	0.00	0.00	41.99	4.63
1559	1696	4.087892	CGGCAGCCACAGGTAGCT	62.088	66.667	13.30	0.00	40.89	3.32
1561	1698	2.434884	CACGGCAGCCACAGGTAG	60.435	66.667	13.30	0.00	0.00	3.18
1629	1766	1.004918	CGGGAACACCTTCTCGCTT	60.005	57.895	0.00	0.00	43.30	4.68
1646	1783	1.063327	CTAGTCTGCACGAGGCTCG	59.937	63.158	33.42	33.42	46.93	5.03
1662	1799	2.361992	TTGAGGAGCGCGACCCTA	60.362	61.111	12.10	9.05	31.84	3.53
1711	1848	3.074675	ACGGAGAGAGTACATGACAGT	57.925	47.619	0.00	0.00	0.00	3.55
1712	1849	5.354513	TCTTTACGGAGAGAGTACATGACAG	59.645	44.000	0.00	0.00	0.00	3.51
1713	1850	5.250982	TCTTTACGGAGAGAGTACATGACA	58.749	41.667	0.00	0.00	0.00	3.58
1714	1851	5.814764	TCTTTACGGAGAGAGTACATGAC	57.185	43.478	0.00	0.00	0.00	3.06
1721	1858	9.315525	GCTTTTATATTTCTTTACGGAGAGAGT	57.684	33.333	0.00	0.00	0.00	3.24
1723	1860	7.977853	ACGCTTTTATATTTCTTTACGGAGAGA	59.022	33.333	0.00	0.00	0.00	3.10
1724	1861	8.128016	ACGCTTTTATATTTCTTTACGGAGAG	57.872	34.615	0.00	0.00	0.00	3.20
1741	1878	9.918630	ACTACTTTAGTGATCTAAACGCTTTTA	57.081	29.630	0.00	0.00	40.05	1.52
1742	1879	8.828688	ACTACTTTAGTGATCTAAACGCTTTT	57.171	30.769	0.00	0.00	40.05	2.27
1758	1895	8.614346	ACTAGAGCGTTTAGATCACTACTTTAG	58.386	37.037	0.00	0.00	37.82	1.85
1759	1896	8.503458	ACTAGAGCGTTTAGATCACTACTTTA	57.497	34.615	0.00	0.00	37.82	1.85
1760	1897	7.393841	ACTAGAGCGTTTAGATCACTACTTT	57.606	36.000	0.00	0.00	37.82	2.66
1761	1898	7.012232	GGTACTAGAGCGTTTAGATCACTACTT	59.988	40.741	0.00	0.00	37.82	2.24
1763	1900	6.259608	TGGTACTAGAGCGTTTAGATCACTAC	59.740	42.308	0.00	0.00	37.82	2.73
1764	1901	6.351711	TGGTACTAGAGCGTTTAGATCACTA	58.648	40.000	0.00	0.00	37.82	2.74
1765	1902	5.191426	TGGTACTAGAGCGTTTAGATCACT	58.809	41.667	0.00	0.00	37.82	3.41
1767	1904	5.241064	GGATGGTACTAGAGCGTTTAGATCA	59.759	44.000	0.00	0.00	37.82	2.92
1768	1905	5.241064	TGGATGGTACTAGAGCGTTTAGATC	59.759	44.000	0.00	0.00	35.01	2.75
1769	1906	5.138276	TGGATGGTACTAGAGCGTTTAGAT	58.862	41.667	0.00	0.00	0.00	1.98
1770	1907	4.529897	TGGATGGTACTAGAGCGTTTAGA	58.470	43.478	0.00	0.00	0.00	2.10
1771	1908	4.913335	TGGATGGTACTAGAGCGTTTAG	57.087	45.455	0.00	0.00	0.00	1.85
1772	1909	5.138276	AGATGGATGGTACTAGAGCGTTTA	58.862	41.667	0.00	0.00	0.00	2.01
1773	1910	3.961408	AGATGGATGGTACTAGAGCGTTT	59.039	43.478	0.00	0.00	0.00	3.60
1775	1912	3.231207	AGATGGATGGTACTAGAGCGT	57.769	47.619	0.00	0.00	0.00	5.07
1776	1913	4.380023	GCTAAGATGGATGGTACTAGAGCG	60.380	50.000	0.00	0.00	0.00	5.03
1777	1914	4.770010	AGCTAAGATGGATGGTACTAGAGC	59.230	45.833	0.00	0.00	0.00	4.09
1778	1915	5.772672	ACAGCTAAGATGGATGGTACTAGAG	59.227	44.000	0.00	0.00	0.00	2.43
1779	1916	5.706447	ACAGCTAAGATGGATGGTACTAGA	58.294	41.667	0.00	0.00	0.00	2.43
1780	1917	6.717540	AGTACAGCTAAGATGGATGGTACTAG	59.282	42.308	0.00	0.00	0.00	2.57
1781	1918	6.611785	AGTACAGCTAAGATGGATGGTACTA	58.388	40.000	0.00	0.00	0.00	1.82
1783	1920	5.793030	AGTACAGCTAAGATGGATGGTAC	57.207	43.478	0.00	0.00	0.00	3.34
1784	1921	6.490381	CACTAGTACAGCTAAGATGGATGGTA	59.510	42.308	0.00	0.00	0.00	3.25
1884	3863	2.719739	TGACTTACTCACCTAGACGGG	58.280	52.381	0.00	0.00	36.97	5.28
1926	3905	1.918957	CTCATTGTCCCCTCCTCCTTT	59.081	52.381	0.00	0.00	0.00	3.11
2002	3981	5.134202	TGAGACTATCAAACACGACATGT	57.866	39.130	0.00	0.00	36.49	3.21
2016	3995	9.013229	TGCATGTTTTTAATGACTTGAGACTAT	57.987	29.630	0.00	0.00	0.00	2.12
2082	4061	5.930569	GGTACATTGACTTCTACCTCGTTTT	59.069	40.000	0.00	0.00	0.00	2.43
2098	4077	0.650512	CACTTAGGCGCGGTACATTG	59.349	55.000	8.83	0.00	0.00	2.82
2107	4086	1.173913	ATCCCAAAACACTTAGGCGC	58.826	50.000	0.00	0.00	0.00	6.53
2139	4118	6.039493	CCGTCTAGGTGTGTAAGTCATCTTAT	59.961	42.308	0.00	0.00	35.59	1.73
2160	4682	3.318557	CCAAGATTAGTACTCCCTCCGTC	59.681	52.174	0.00	0.00	0.00	4.79
2198	4727	7.766219	TGAAAAGTGTACTAAACTCTGACAC	57.234	36.000	0.00	0.00	40.55	3.67
2199	4728	8.201464	TCATGAAAAGTGTACTAAACTCTGACA	58.799	33.333	0.00	0.00	32.34	3.58
2200	4729	8.589335	TCATGAAAAGTGTACTAAACTCTGAC	57.411	34.615	0.00	0.00	32.34	3.51
2231	4762	4.592485	TCACTCTCCACTTCTCTTTCAC	57.408	45.455	0.00	0.00	0.00	3.18
2232	4763	6.918067	TTATCACTCTCCACTTCTCTTTCA	57.082	37.500	0.00	0.00	0.00	2.69
2233	4764	8.785329	ATTTTATCACTCTCCACTTCTCTTTC	57.215	34.615	0.00	0.00	0.00	2.62
2262	4793	2.646930	CTCAATTCCCTGCATGCACTA	58.353	47.619	18.46	1.56	0.00	2.74
2263	4794	1.471119	CTCAATTCCCTGCATGCACT	58.529	50.000	18.46	0.00	0.00	4.40
2264	4795	0.179119	GCTCAATTCCCTGCATGCAC	60.179	55.000	18.46	0.00	0.00	4.57
2265	4796	0.612453	TGCTCAATTCCCTGCATGCA	60.612	50.000	21.29	21.29	0.00	3.96
2266	4797	0.750850	ATGCTCAATTCCCTGCATGC	59.249	50.000	11.82	11.82	43.41	4.06
2273	4804	1.398390	GACACGTCATGCTCAATTCCC	59.602	52.381	0.00	0.00	0.00	3.97
2320	4851	3.244770	TGCCTTTTCCTAGTAGTGTTGGG	60.245	47.826	0.00	0.00	0.00	4.12
2325	4856	3.878778	AGCATGCCTTTTCCTAGTAGTG	58.121	45.455	15.66	0.00	0.00	2.74
2326	4857	4.717280	ACTAGCATGCCTTTTCCTAGTAGT	59.283	41.667	15.66	8.52	37.52	2.73
2327	4858	5.053145	CACTAGCATGCCTTTTCCTAGTAG	58.947	45.833	15.66	7.85	37.27	2.57
2328	4859	4.141711	CCACTAGCATGCCTTTTCCTAGTA	60.142	45.833	15.66	0.00	37.27	1.82
2329	4860	3.370953	CCACTAGCATGCCTTTTCCTAGT	60.371	47.826	15.66	10.77	39.27	2.57
2330	4861	3.209410	CCACTAGCATGCCTTTTCCTAG	58.791	50.000	15.66	10.09	33.48	3.02
2331	4862	2.683742	GCCACTAGCATGCCTTTTCCTA	60.684	50.000	15.66	0.00	42.97	2.94
2332	4863	1.957113	GCCACTAGCATGCCTTTTCCT	60.957	52.381	15.66	0.00	42.97	3.36
2333	4864	0.457443	GCCACTAGCATGCCTTTTCC	59.543	55.000	15.66	0.00	42.97	3.13
2334	4865	0.099436	CGCCACTAGCATGCCTTTTC	59.901	55.000	15.66	0.00	44.04	2.29
2335	4866	1.937546	GCGCCACTAGCATGCCTTTT	61.938	55.000	15.66	0.00	44.04	2.27
2336	4867	2.409870	GCGCCACTAGCATGCCTTT	61.410	57.895	15.66	0.00	44.04	3.11
2337	4868	2.825836	GCGCCACTAGCATGCCTT	60.826	61.111	15.66	0.00	44.04	4.35
2338	4869	4.100084	TGCGCCACTAGCATGCCT	62.100	61.111	15.66	4.37	44.04	4.75
2339	4870	3.880846	GTGCGCCACTAGCATGCC	61.881	66.667	15.66	0.00	46.96	4.40
2340	4871	3.880846	GGTGCGCCACTAGCATGC	61.881	66.667	12.58	10.51	46.96	4.06
2341	4872	2.436469	TGGTGCGCCACTAGCATG	60.436	61.111	16.89	0.00	46.96	4.06
2342	4873	2.124983	CTGGTGCGCCACTAGCAT	60.125	61.111	16.89	0.00	46.96	3.79
2343	4874	2.674563	AAACTGGTGCGCCACTAGCA	62.675	55.000	16.89	9.57	44.89	3.49
2344	4875	1.515521	AAAACTGGTGCGCCACTAGC	61.516	55.000	16.89	5.63	44.89	3.42
2345	4876	0.238289	CAAAACTGGTGCGCCACTAG	59.762	55.000	16.89	17.26	46.13	2.57
2346	4877	1.791103	GCAAAACTGGTGCGCCACTA	61.791	55.000	16.89	0.00	40.46	2.74
2347	4878	3.119193	CAAAACTGGTGCGCCACT	58.881	55.556	16.89	3.24	40.46	4.00
2348	4879	2.658268	GCAAAACTGGTGCGCCAC	60.658	61.111	16.89	0.00	40.46	5.01
2349	4880	3.910490	GGCAAAACTGGTGCGCCA	61.910	61.111	19.93	19.93	43.18	5.69
2350	4881	3.150647	AAGGCAAAACTGGTGCGCC	62.151	57.895	10.11	10.11	43.18	6.53
2351	4882	1.661509	GAAGGCAAAACTGGTGCGC	60.662	57.895	0.00	0.00	43.18	6.09
2352	4883	1.234821	TAGAAGGCAAAACTGGTGCG	58.765	50.000	0.00	0.00	43.18	5.34
2353	4884	3.578688	CATTAGAAGGCAAAACTGGTGC	58.421	45.455	0.00	0.00	41.45	5.01
2354	4885	4.178545	CCATTAGAAGGCAAAACTGGTG	57.821	45.455	0.00	0.00	0.00	4.17
2365	4896	2.205074	CAGTAGTGCGCCATTAGAAGG	58.795	52.381	4.18	0.00	0.00	3.46
2366	4897	2.205074	CCAGTAGTGCGCCATTAGAAG	58.795	52.381	4.18	0.00	0.00	2.85
2367	4898	1.553248	ACCAGTAGTGCGCCATTAGAA	59.447	47.619	4.18	0.00	0.00	2.10
2368	4899	1.134818	CACCAGTAGTGCGCCATTAGA	60.135	52.381	4.18	0.00	40.28	2.10
2369	4900	1.290203	CACCAGTAGTGCGCCATTAG	58.710	55.000	4.18	0.00	40.28	1.73
2370	4901	3.451793	CACCAGTAGTGCGCCATTA	57.548	52.632	4.18	0.00	40.28	1.90
2371	4902	4.301505	CACCAGTAGTGCGCCATT	57.698	55.556	4.18	0.00	40.28	3.16
2384	4915	2.125147	GATGCTAGTGGCGCACCA	60.125	61.111	10.83	0.00	46.51	4.17
2385	4916	2.125147	TGATGCTAGTGGCGCACC	60.125	61.111	10.83	0.00	45.43	5.01
2386	4917	2.802667	CGTGATGCTAGTGGCGCAC	61.803	63.158	10.83	12.35	45.43	5.34
2387	4918	2.509111	CGTGATGCTAGTGGCGCA	60.509	61.111	10.83	0.00	45.43	6.09
2388	4919	3.929948	GCGTGATGCTAGTGGCGC	61.930	66.667	0.00	0.00	45.43	6.53
2389	4920	3.264897	GGCGTGATGCTAGTGGCG	61.265	66.667	0.00	0.00	45.43	5.69
2390	4921	1.097547	AATGGCGTGATGCTAGTGGC	61.098	55.000	0.00	0.00	45.43	5.01
2391	4922	2.138320	CTAATGGCGTGATGCTAGTGG	58.862	52.381	0.00	0.00	45.43	4.00
2392	4923	3.097877	TCTAATGGCGTGATGCTAGTG	57.902	47.619	0.00	0.00	45.43	2.74
2393	4924	3.819564	TTCTAATGGCGTGATGCTAGT	57.180	42.857	0.00	0.00	45.43	2.57
2394	4925	6.785488	TTAATTCTAATGGCGTGATGCTAG	57.215	37.500	0.00	0.00	45.43	3.42
2395	4926	7.744087	ATTTAATTCTAATGGCGTGATGCTA	57.256	32.000	0.00	0.00	45.43	3.49
2396	4927	6.639632	ATTTAATTCTAATGGCGTGATGCT	57.360	33.333	0.00	0.00	45.43	3.79
2397	4928	7.325599	GAATTTAATTCTAATGGCGTGATGC	57.674	36.000	10.15	0.00	38.42	3.91
2409	4940	8.815565	TGGTGCACCATTAGAATTTAATTCTA	57.184	30.769	34.74	19.83	43.55	2.10
2410	4941	7.716799	TGGTGCACCATTAGAATTTAATTCT	57.283	32.000	34.74	21.70	45.51	2.40
2437	4968	1.202651	ACCAGATACTAATGGCGCACC	60.203	52.381	10.83	0.00	40.45	5.01
2438	4969	1.867233	CACCAGATACTAATGGCGCAC	59.133	52.381	10.83	0.00	40.45	5.34
2439	4970	1.484653	ACACCAGATACTAATGGCGCA	59.515	47.619	10.83	0.00	40.45	6.09
2440	4971	2.240493	ACACCAGATACTAATGGCGC	57.760	50.000	0.00	0.00	40.45	6.53
2441	4972	4.060038	AGAACACCAGATACTAATGGCG	57.940	45.455	0.00	0.00	40.45	5.69
2442	4973	7.426929	CATTAGAACACCAGATACTAATGGC	57.573	40.000	0.92	0.00	42.64	4.40
2444	4975	6.146184	CGCCATTAGAACACCAGATACTAATG	59.854	42.308	1.54	1.54	44.31	1.90
2445	4976	6.223852	CGCCATTAGAACACCAGATACTAAT	58.776	40.000	0.00	0.00	35.18	1.73
2446	4977	5.597806	CGCCATTAGAACACCAGATACTAA	58.402	41.667	0.00	0.00	0.00	2.24
2447	4978	4.500887	GCGCCATTAGAACACCAGATACTA	60.501	45.833	0.00	0.00	0.00	1.82
2448	4979	3.741388	GCGCCATTAGAACACCAGATACT	60.741	47.826	0.00	0.00	0.00	2.12
2449	4980	2.544267	GCGCCATTAGAACACCAGATAC	59.456	50.000	0.00	0.00	0.00	2.24
2450	4981	2.169561	TGCGCCATTAGAACACCAGATA	59.830	45.455	4.18	0.00	0.00	1.98
2451	4982	1.065491	TGCGCCATTAGAACACCAGAT	60.065	47.619	4.18	0.00	0.00	2.90
2452	4983	0.323302	TGCGCCATTAGAACACCAGA	59.677	50.000	4.18	0.00	0.00	3.86
2453	4984	0.447801	GTGCGCCATTAGAACACCAG	59.552	55.000	4.18	0.00	0.00	4.00
2454	4985	2.550487	GTGCGCCATTAGAACACCA	58.450	52.632	4.18	0.00	0.00	4.17
2455	4986	1.800681	GGTGCGCCATTAGAACACC	59.199	57.895	12.58	0.00	43.57	4.16
2456	4987	2.550487	TGGTGCGCCATTAGAACAC	58.450	52.632	16.89	0.00	40.46	3.32
2470	5001	1.599071	CTAATGGCGCACTACATGGTG	59.401	52.381	10.83	0.00	39.91	4.17
2471	5002	1.209504	ACTAATGGCGCACTACATGGT	59.790	47.619	10.83	3.81	0.00	3.55
2472	5003	1.953559	ACTAATGGCGCACTACATGG	58.046	50.000	10.83	3.19	0.00	3.66
2473	5004	3.453424	TGTACTAATGGCGCACTACATG	58.547	45.455	10.83	0.00	0.00	3.21
2474	5005	3.492656	CCTGTACTAATGGCGCACTACAT	60.493	47.826	10.83	0.00	0.00	2.29
2475	5006	2.159156	CCTGTACTAATGGCGCACTACA	60.159	50.000	10.83	0.00	0.00	2.74
2476	5007	2.470821	CCTGTACTAATGGCGCACTAC	58.529	52.381	10.83	0.00	0.00	2.73
2477	5008	1.202486	GCCTGTACTAATGGCGCACTA	60.202	52.381	10.83	0.00	37.11	2.74
2478	5009	0.462047	GCCTGTACTAATGGCGCACT	60.462	55.000	10.83	0.00	37.11	4.40
2479	5010	1.436983	GGCCTGTACTAATGGCGCAC	61.437	60.000	10.83	0.00	46.97	5.34
2480	5011	1.153249	GGCCTGTACTAATGGCGCA	60.153	57.895	10.83	0.00	46.97	6.09
2481	5012	1.153249	TGGCCTGTACTAATGGCGC	60.153	57.895	3.32	0.00	46.97	6.53
2482	5013	1.151777	CGTGGCCTGTACTAATGGCG	61.152	60.000	3.32	0.00	46.97	5.69
2483	5014	0.814010	CCGTGGCCTGTACTAATGGC	60.814	60.000	3.32	9.97	45.42	4.40
2484	5015	0.539986	ACCGTGGCCTGTACTAATGG	59.460	55.000	3.32	0.00	0.00	3.16
2485	5016	1.651987	CACCGTGGCCTGTACTAATG	58.348	55.000	3.32	0.00	0.00	1.90
2486	5017	0.107848	GCACCGTGGCCTGTACTAAT	60.108	55.000	3.32	0.00	0.00	1.73
2487	5018	1.294138	GCACCGTGGCCTGTACTAA	59.706	57.895	3.32	0.00	0.00	2.24
2488	5019	2.975536	GCACCGTGGCCTGTACTA	59.024	61.111	3.32	0.00	0.00	1.82
2489	5020	4.373116	CGCACCGTGGCCTGTACT	62.373	66.667	3.32	0.00	0.00	2.73
2496	5027	3.876198	CTAATGGCGCACCGTGGC	61.876	66.667	10.83	2.21	39.70	5.01
2497	5028	0.531974	ATACTAATGGCGCACCGTGG	60.532	55.000	10.83	0.00	39.70	4.94
2498	5029	1.295792	AATACTAATGGCGCACCGTG	58.704	50.000	10.83	0.00	39.70	4.94
2499	5030	2.032680	AAATACTAATGGCGCACCGT	57.967	45.000	10.83	0.65	39.70	4.83
2500	5031	3.105203	CAAAAATACTAATGGCGCACCG	58.895	45.455	10.83	0.00	39.70	4.94
2501	5032	4.364415	TCAAAAATACTAATGGCGCACC	57.636	40.909	10.83	0.00	0.00	5.01
2502	5033	6.885735	AATTCAAAAATACTAATGGCGCAC	57.114	33.333	10.83	0.00	0.00	5.34
2503	5034	7.600375	TCAAAATTCAAAAATACTAATGGCGCA	59.400	29.630	10.83	0.00	0.00	6.09
2504	5035	7.958674	TCAAAATTCAAAAATACTAATGGCGC	58.041	30.769	0.00	0.00	0.00	6.53
2505	5036	9.956797	CTTCAAAATTCAAAAATACTAATGGCG	57.043	29.630	0.00	0.00	0.00	5.69
2508	5039	9.956797	CGCCTTCAAAATTCAAAAATACTAATG	57.043	29.630	0.00	0.00	0.00	1.90
2509	5040	9.150348	CCGCCTTCAAAATTCAAAAATACTAAT	57.850	29.630	0.00	0.00	0.00	1.73
2510	5041	7.600752	CCCGCCTTCAAAATTCAAAAATACTAA	59.399	33.333	0.00	0.00	0.00	2.24
2511	5042	7.039644	TCCCGCCTTCAAAATTCAAAAATACTA	60.040	33.333	0.00	0.00	0.00	1.82
2512	5043	5.931724	CCCGCCTTCAAAATTCAAAAATACT	59.068	36.000	0.00	0.00	0.00	2.12
2513	5044	5.929415	TCCCGCCTTCAAAATTCAAAAATAC	59.071	36.000	0.00	0.00	0.00	1.89
2514	5045	6.102897	TCCCGCCTTCAAAATTCAAAAATA	57.897	33.333	0.00	0.00	0.00	1.40
2515	5046	4.967036	TCCCGCCTTCAAAATTCAAAAAT	58.033	34.783	0.00	0.00	0.00	1.82
2516	5047	4.408182	TCCCGCCTTCAAAATTCAAAAA	57.592	36.364	0.00	0.00	0.00	1.94
2517	5048	4.408182	TTCCCGCCTTCAAAATTCAAAA	57.592	36.364	0.00	0.00	0.00	2.44
2518	5049	4.408182	TTTCCCGCCTTCAAAATTCAAA	57.592	36.364	0.00	0.00	0.00	2.69
2519	5050	4.408182	TTTTCCCGCCTTCAAAATTCAA	57.592	36.364	0.00	0.00	0.00	2.69
2520	5051	4.615588	ATTTTCCCGCCTTCAAAATTCA	57.384	36.364	0.00	0.00	0.00	2.57
2521	5052	5.720202	ACTATTTTCCCGCCTTCAAAATTC	58.280	37.500	0.00	0.00	33.02	2.17
2522	5053	5.738619	ACTATTTTCCCGCCTTCAAAATT	57.261	34.783	0.00	0.00	33.02	1.82
2523	5054	5.949952	ACTACTATTTTCCCGCCTTCAAAAT	59.050	36.000	0.00	0.00	34.75	1.82
2524	5055	5.182380	CACTACTATTTTCCCGCCTTCAAAA	59.818	40.000	0.00	0.00	0.00	2.44
2525	5056	4.698304	CACTACTATTTTCCCGCCTTCAAA	59.302	41.667	0.00	0.00	0.00	2.69
2526	5057	4.258543	CACTACTATTTTCCCGCCTTCAA	58.741	43.478	0.00	0.00	0.00	2.69
2527	5058	3.370103	CCACTACTATTTTCCCGCCTTCA	60.370	47.826	0.00	0.00	0.00	3.02
2528	5059	3.203716	CCACTACTATTTTCCCGCCTTC	58.796	50.000	0.00	0.00	0.00	3.46
2529	5060	2.682858	GCCACTACTATTTTCCCGCCTT	60.683	50.000	0.00	0.00	0.00	4.35
2530	5061	1.134189	GCCACTACTATTTTCCCGCCT	60.134	52.381	0.00	0.00	0.00	5.52
2531	5062	1.306148	GCCACTACTATTTTCCCGCC	58.694	55.000	0.00	0.00	0.00	6.13
2532	5063	0.935196	CGCCACTACTATTTTCCCGC	59.065	55.000	0.00	0.00	0.00	6.13
2533	5064	0.935196	GCGCCACTACTATTTTCCCG	59.065	55.000	0.00	0.00	0.00	5.14
2534	5065	2.032680	TGCGCCACTACTATTTTCCC	57.967	50.000	4.18	0.00	0.00	3.97
2535	5066	2.221055	CGATGCGCCACTACTATTTTCC	59.779	50.000	4.18	0.00	0.00	3.13
2536	5067	2.864343	ACGATGCGCCACTACTATTTTC	59.136	45.455	4.18	0.00	0.00	2.29
2537	5068	2.864343	GACGATGCGCCACTACTATTTT	59.136	45.455	4.18	0.00	0.00	1.82
2538	5069	2.100916	AGACGATGCGCCACTACTATTT	59.899	45.455	4.18	0.00	0.00	1.40
2539	5070	1.681793	AGACGATGCGCCACTACTATT	59.318	47.619	4.18	0.00	0.00	1.73
2540	5071	1.319541	AGACGATGCGCCACTACTAT	58.680	50.000	4.18	0.00	0.00	2.12
2541	5072	1.957668	TAGACGATGCGCCACTACTA	58.042	50.000	4.18	0.49	0.00	1.82
2542	5073	1.100510	TTAGACGATGCGCCACTACT	58.899	50.000	4.18	1.56	0.00	2.57
2543	5074	1.197910	GTTAGACGATGCGCCACTAC	58.802	55.000	4.18	0.00	0.00	2.73
2544	5075	0.101759	GGTTAGACGATGCGCCACTA	59.898	55.000	4.18	0.00	0.00	2.74
2545	5076	1.153628	GGTTAGACGATGCGCCACT	60.154	57.895	4.18	0.00	0.00	4.00
2546	5077	2.171725	GGGTTAGACGATGCGCCAC	61.172	63.158	4.18	0.00	0.00	5.01
2547	5078	2.185867	GGGTTAGACGATGCGCCA	59.814	61.111	4.18	0.00	0.00	5.69
2548	5079	2.588034	GGGGTTAGACGATGCGCC	60.588	66.667	4.18	0.00	0.00	6.53
2549	5080	2.588034	GGGGGTTAGACGATGCGC	60.588	66.667	0.00	0.00	0.00	6.09
2550	5081	1.520787	GTGGGGGTTAGACGATGCG	60.521	63.158	0.00	0.00	0.00	4.73
2551	5082	1.153229	GGTGGGGGTTAGACGATGC	60.153	63.158	0.00	0.00	0.00	3.91
2552	5083	1.143183	CGGTGGGGGTTAGACGATG	59.857	63.158	0.00	0.00	0.00	3.84
2553	5084	1.305549	ACGGTGGGGGTTAGACGAT	60.306	57.895	0.00	0.00	0.00	3.73
2554	5085	2.118076	ACGGTGGGGGTTAGACGA	59.882	61.111	0.00	0.00	0.00	4.20
2555	5086	2.263540	CACGGTGGGGGTTAGACG	59.736	66.667	0.00	0.00	0.00	4.18
2556	5087	2.046604	GCACGGTGGGGGTTAGAC	60.047	66.667	10.60	0.00	0.00	2.59
2557	5088	3.697747	CGCACGGTGGGGGTTAGA	61.698	66.667	16.62	0.00	0.00	2.10
2558	5089	3.945304	GACGCACGGTGGGGGTTAG	62.945	68.421	26.02	0.00	34.28	2.34
2559	5090	4.006357	GACGCACGGTGGGGGTTA	62.006	66.667	26.02	0.00	34.28	2.85
2562	5093	4.715523	AATGACGCACGGTGGGGG	62.716	66.667	26.02	5.64	34.28	5.40
2563	5094	3.430862	CAATGACGCACGGTGGGG	61.431	66.667	26.02	10.72	34.28	4.96
2564	5095	4.101790	GCAATGACGCACGGTGGG	62.102	66.667	21.86	21.86	36.28	4.61
2565	5096	1.089481	ATAGCAATGACGCACGGTGG	61.089	55.000	10.60	2.76	0.00	4.61
2566	5097	0.726827	AATAGCAATGACGCACGGTG	59.273	50.000	3.15	3.15	0.00	4.94
2567	5098	1.448985	AAATAGCAATGACGCACGGT	58.551	45.000	0.00	0.00	0.00	4.83
2568	5099	2.542766	AAAATAGCAATGACGCACGG	57.457	45.000	0.00	0.00	0.00	4.94
2569	5100	3.487536	TCAAAAATAGCAATGACGCACG	58.512	40.909	0.00	0.00	0.00	5.34
2570	5101	6.393720	AATTCAAAAATAGCAATGACGCAC	57.606	33.333	0.00	0.00	0.00	5.34
2571	5102	7.170489	TCAAAATTCAAAAATAGCAATGACGCA	59.830	29.630	0.00	0.00	0.00	5.24
2572	5103	7.508965	TCAAAATTCAAAAATAGCAATGACGC	58.491	30.769	0.00	0.00	0.00	5.19
2584	5115	9.624373	TCCAGATCCAAATTCAAAATTCAAAAA	57.376	25.926	0.00	0.00	0.00	1.94
2585	5116	9.796180	ATCCAGATCCAAATTCAAAATTCAAAA	57.204	25.926	0.00	0.00	0.00	2.44
2586	5117	9.439500	GATCCAGATCCAAATTCAAAATTCAAA	57.561	29.630	0.00	0.00	31.76	2.69
2587	5118	7.760794	CGATCCAGATCCAAATTCAAAATTCAA	59.239	33.333	2.11	0.00	34.40	2.69
2588	5119	7.259882	CGATCCAGATCCAAATTCAAAATTCA	58.740	34.615	2.11	0.00	34.40	2.57
2589	5120	6.199719	GCGATCCAGATCCAAATTCAAAATTC	59.800	38.462	2.11	0.00	34.40	2.17
2590	5121	6.044682	GCGATCCAGATCCAAATTCAAAATT	58.955	36.000	2.11	0.00	34.40	1.82
2591	5122	5.594926	GCGATCCAGATCCAAATTCAAAAT	58.405	37.500	2.11	0.00	34.40	1.82
2592	5123	4.438608	CGCGATCCAGATCCAAATTCAAAA	60.439	41.667	0.00	0.00	34.40	2.44
2593	5124	3.065233	CGCGATCCAGATCCAAATTCAAA	59.935	43.478	0.00	0.00	34.40	2.69
2594	5125	2.613595	CGCGATCCAGATCCAAATTCAA	59.386	45.455	0.00	0.00	34.40	2.69
2595	5126	2.158971	TCGCGATCCAGATCCAAATTCA	60.159	45.455	3.71	0.00	34.40	2.57
2596	5127	2.483876	TCGCGATCCAGATCCAAATTC	58.516	47.619	3.71	0.00	34.40	2.17
2597	5128	2.620251	TCGCGATCCAGATCCAAATT	57.380	45.000	3.71	0.00	34.40	1.82
2598	5129	2.847327	ATCGCGATCCAGATCCAAAT	57.153	45.000	17.62	0.00	34.40	2.32
2599	5130	2.620251	AATCGCGATCCAGATCCAAA	57.380	45.000	23.92	0.00	34.40	3.28
2600	5131	2.620251	AAATCGCGATCCAGATCCAA	57.380	45.000	23.92	0.00	34.40	3.53
2601	5132	2.620251	AAAATCGCGATCCAGATCCA	57.380	45.000	23.92	0.00	34.40	3.41
2646	5177	9.081997	GGAACAAATTTGAAATAATATCGTGCA	57.918	29.630	24.64	0.00	0.00	4.57
2647	5178	8.539674	GGGAACAAATTTGAAATAATATCGTGC	58.460	33.333	24.64	0.00	0.00	5.34
2648	5179	8.742188	CGGGAACAAATTTGAAATAATATCGTG	58.258	33.333	24.64	0.00	0.00	4.35
2649	5180	8.463607	ACGGGAACAAATTTGAAATAATATCGT	58.536	29.630	24.64	15.66	0.00	3.73
2650	5181	8.850454	ACGGGAACAAATTTGAAATAATATCG	57.150	30.769	24.64	15.14	0.00	2.92
2654	5185	9.943163	CAAAAACGGGAACAAATTTGAAATAAT	57.057	25.926	24.64	3.35	31.14	1.28
2655	5186	8.398665	CCAAAAACGGGAACAAATTTGAAATAA	58.601	29.630	24.64	0.00	31.14	1.40
2656	5187	7.769044	TCCAAAAACGGGAACAAATTTGAAATA	59.231	29.630	24.64	0.00	31.14	1.40
2657	5188	6.599638	TCCAAAAACGGGAACAAATTTGAAAT	59.400	30.769	24.64	10.03	31.14	2.17
2658	5189	5.938125	TCCAAAAACGGGAACAAATTTGAAA	59.062	32.000	24.64	0.00	31.14	2.69
2659	5190	5.488341	TCCAAAAACGGGAACAAATTTGAA	58.512	33.333	24.64	0.00	31.14	2.69
2660	5191	5.086104	TCCAAAAACGGGAACAAATTTGA	57.914	34.783	24.64	0.00	31.14	2.69
2661	5192	5.757808	AGATCCAAAAACGGGAACAAATTTG	59.242	36.000	16.67	16.67	38.09	2.32
2662	5193	5.924356	AGATCCAAAAACGGGAACAAATTT	58.076	33.333	0.00	0.00	38.09	1.82
2663	5194	5.545063	AGATCCAAAAACGGGAACAAATT	57.455	34.783	0.00	0.00	38.09	1.82
2664	5195	5.163353	ACAAGATCCAAAAACGGGAACAAAT	60.163	36.000	0.00	0.00	38.09	2.32
2665	5196	4.160626	ACAAGATCCAAAAACGGGAACAAA	59.839	37.500	0.00	0.00	38.09	2.83
2666	5197	3.702045	ACAAGATCCAAAAACGGGAACAA	59.298	39.130	0.00	0.00	38.09	2.83
2667	5198	3.292460	ACAAGATCCAAAAACGGGAACA	58.708	40.909	0.00	0.00	38.09	3.18
2668	5199	4.612033	CGTACAAGATCCAAAAACGGGAAC	60.612	45.833	0.00	0.00	38.09	3.62
2669	5200	3.499157	CGTACAAGATCCAAAAACGGGAA	59.501	43.478	0.00	0.00	38.09	3.97
2670	5201	3.068560	CGTACAAGATCCAAAAACGGGA	58.931	45.455	0.00	0.00	39.14	5.14
2671	5202	2.809696	ACGTACAAGATCCAAAAACGGG	59.190	45.455	9.18	0.00	33.44	5.28
2672	5203	4.212636	AGAACGTACAAGATCCAAAAACGG	59.787	41.667	0.00	0.00	33.44	4.44
2673	5204	5.338614	AGAACGTACAAGATCCAAAAACG	57.661	39.130	0.00	0.00	35.17	3.60
2674	5205	7.698970	TCAAAAGAACGTACAAGATCCAAAAAC	59.301	33.333	0.00	0.00	0.00	2.43
2675	5206	7.698970	GTCAAAAGAACGTACAAGATCCAAAAA	59.301	33.333	0.00	0.00	0.00	1.94
2676	5207	7.190871	GTCAAAAGAACGTACAAGATCCAAAA	58.809	34.615	0.00	0.00	0.00	2.44
2677	5208	6.510478	CGTCAAAAGAACGTACAAGATCCAAA	60.510	38.462	0.00	0.00	35.47	3.28
2678	5209	5.050634	CGTCAAAAGAACGTACAAGATCCAA	60.051	40.000	0.00	0.00	35.47	3.53
2679	5210	4.446385	CGTCAAAAGAACGTACAAGATCCA	59.554	41.667	0.00	0.00	35.47	3.41
2680	5211	4.942765	CGTCAAAAGAACGTACAAGATCC	58.057	43.478	0.00	0.00	35.47	3.36

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.