Multiple sequence alignment - TraesCS7B01G468200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G468200 chr7B 100.000 5380 0 0 1 5380 725521614 725516235 0.000000e+00 9936.0
1 TraesCS7B01G468200 chr7B 86.304 2687 304 39 1650 4307 725524453 725527104 0.000000e+00 2865.0
2 TraesCS7B01G468200 chr7B 89.820 167 13 3 5047 5209 725195820 725195986 1.520000e-50 211.0
3 TraesCS7B01G468200 chr7B 92.857 42 3 0 797 838 725522379 725522420 1.620000e-05 62.1
4 TraesCS7B01G468200 chr7D 92.870 2735 156 15 1576 4310 625599389 625596694 0.000000e+00 3934.0
5 TraesCS7B01G468200 chr7D 86.426 2689 297 41 1650 4307 625603843 625606494 0.000000e+00 2881.0
6 TraesCS7B01G468200 chr7D 87.687 934 72 14 4320 5212 625596634 625595703 0.000000e+00 1048.0
7 TraesCS7B01G468200 chr7D 92.563 632 35 4 608 1238 625600488 625599868 0.000000e+00 896.0
8 TraesCS7B01G468200 chr7D 74.248 1829 369 74 1835 3618 483140573 483142344 0.000000e+00 675.0
9 TraesCS7B01G468200 chr7D 91.753 485 32 4 19 496 625600985 625600502 0.000000e+00 667.0
10 TraesCS7B01G468200 chr7D 89.362 235 19 3 1273 1507 625599862 625599634 1.900000e-74 291.0
11 TraesCS7B01G468200 chr7D 83.122 237 20 12 982 1217 625603102 625603319 1.180000e-46 198.0
12 TraesCS7B01G468200 chr1B 87.727 2640 255 30 1667 4276 30544398 30546998 0.000000e+00 3016.0
13 TraesCS7B01G468200 chr1B 81.746 126 23 0 5208 5333 149512529 149512654 7.370000e-19 106.0
14 TraesCS7B01G468200 chr7A 86.858 2686 292 40 1650 4307 721172788 721175440 0.000000e+00 2948.0
15 TraesCS7B01G468200 chr7A 93.229 1595 104 2 1578 3171 721165505 721163914 0.000000e+00 2344.0
16 TraesCS7B01G468200 chr7A 91.085 1088 65 23 3220 4302 721163914 721162854 0.000000e+00 1443.0
17 TraesCS7B01G468200 chr7A 89.511 696 39 18 683 1378 721166435 721165774 0.000000e+00 850.0
18 TraesCS7B01G468200 chr7A 85.259 251 21 12 971 1217 721172022 721172260 1.500000e-60 244.0
19 TraesCS7B01G468200 chr7A 90.446 157 12 3 4463 4618 721124474 721124320 2.540000e-48 204.0
20 TraesCS7B01G468200 chr7A 87.719 171 16 3 118 284 721171435 721171266 1.530000e-45 195.0
21 TraesCS7B01G468200 chr7A 85.792 183 8 5 4320 4484 721162788 721162606 1.540000e-40 178.0
22 TraesCS7B01G468200 chr7A 82.540 126 22 0 5208 5333 193098667 193098792 1.580000e-20 111.0
23 TraesCS7B01G468200 chr7A 92.308 52 2 1 553 604 721170709 721170660 7.470000e-09 73.1
24 TraesCS7B01G468200 chr7A 92.857 42 3 0 797 838 721167977 721168018 1.620000e-05 62.1
25 TraesCS7B01G468200 chr1D 87.393 2570 260 29 1667 4213 16610718 16613246 0.000000e+00 2892.0
26 TraesCS7B01G468200 chr1D 85.350 314 36 7 963 1270 16610352 16610661 3.130000e-82 316.0
27 TraesCS7B01G468200 chr1D 92.857 42 3 0 797 838 16609536 16609577 1.620000e-05 62.1
28 TraesCS7B01G468200 chr1D 100.000 31 0 0 658 688 16609596 16609626 2.090000e-04 58.4
29 TraesCS7B01G468200 chr1A 87.216 2245 242 21 1937 4165 17008893 17011108 0.000000e+00 2514.0
30 TraesCS7B01G468200 chr1A 92.275 233 18 0 1667 1899 17008661 17008893 1.120000e-86 331.0
31 TraesCS7B01G468200 chr1A 92.857 42 3 0 797 838 17007143 17007184 1.620000e-05 62.1
32 TraesCS7B01G468200 chr3A 83.333 126 21 0 5208 5333 437677456 437677331 3.400000e-22 117.0
33 TraesCS7B01G468200 chr3A 84.483 116 18 0 5208 5323 542162154 542162039 1.220000e-21 115.0
34 TraesCS7B01G468200 chr3A 89.011 91 10 0 5208 5298 285834712 285834802 4.400000e-21 113.0
35 TraesCS7B01G468200 chr5A 81.513 119 22 0 3 121 650555972 650556090 1.230000e-16 99.0
36 TraesCS7B01G468200 chr5A 100.000 33 0 0 1563 1595 558137700 558137668 1.620000e-05 62.1
37 TraesCS7B01G468200 chr6D 79.365 126 26 0 5208 5333 239953498 239953373 7.420000e-14 89.8
38 TraesCS7B01G468200 chr3D 76.978 139 26 5 5199 5335 293186083 293186217 2.080000e-09 75.0
39 TraesCS7B01G468200 chr6B 96.970 33 1 0 1248 1280 11409711 11409743 7.530000e-04 56.5
40 TraesCS7B01G468200 chr3B 100.000 28 0 0 1366 1393 830327965 830327938 1.000000e-02 52.8
41 TraesCS7B01G468200 chr3B 100.000 28 0 0 1366 1393 830358557 830358530 1.000000e-02 52.8
42 TraesCS7B01G468200 chr3B 100.000 28 0 0 1366 1393 830617960 830617933 1.000000e-02 52.8
43 TraesCS7B01G468200 chr3B 100.000 28 0 0 1366 1393 830647257 830647230 1.000000e-02 52.8
44 TraesCS7B01G468200 chr2A 100.000 28 0 0 1366 1393 765962646 765962673 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G468200 chr7B 725516235 725521614 5379 True 9936.000000 9936 100.000000 1 5380 1 chr7B.!!$R1 5379
1 TraesCS7B01G468200 chr7B 725522379 725527104 4725 False 1463.550000 2865 89.580500 797 4307 2 chr7B.!!$F2 3510
2 TraesCS7B01G468200 chr7D 625603102 625606494 3392 False 1539.500000 2881 84.774000 982 4307 2 chr7D.!!$F2 3325
3 TraesCS7B01G468200 chr7D 625595703 625600985 5282 True 1367.200000 3934 90.847000 19 5212 5 chr7D.!!$R1 5193
4 TraesCS7B01G468200 chr7D 483140573 483142344 1771 False 675.000000 675 74.248000 1835 3618 1 chr7D.!!$F1 1783
5 TraesCS7B01G468200 chr1B 30544398 30546998 2600 False 3016.000000 3016 87.727000 1667 4276 1 chr1B.!!$F1 2609
6 TraesCS7B01G468200 chr7A 721172022 721175440 3418 False 1596.000000 2948 86.058500 971 4307 2 chr7A.!!$F3 3336
7 TraesCS7B01G468200 chr7A 721162606 721166435 3829 True 1203.750000 2344 89.904250 683 4484 4 chr7A.!!$R2 3801
8 TraesCS7B01G468200 chr1D 16609536 16613246 3710 False 832.125000 2892 91.400000 658 4213 4 chr1D.!!$F1 3555
9 TraesCS7B01G468200 chr1A 17007143 17011108 3965 False 969.033333 2514 90.782667 797 4165 3 chr1A.!!$F1 3368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
535 543 0.032952 CATGTGCTGCTTGGCAAGTT 59.967 50.0 26.71 2.83 44.18 2.66 F
536 544 0.032952 ATGTGCTGCTTGGCAAGTTG 59.967 50.0 26.71 19.81 44.18 3.16 F
1358 2344 0.035056 AGCGCAATTTAGCACCCTCT 60.035 50.0 11.47 0.00 35.48 3.69 F
1528 3680 0.312729 CACCAAACCGTTTAGCACCC 59.687 55.0 0.00 0.00 0.00 4.61 F
1540 3692 0.616371 TAGCACCCCATTAACGCACT 59.384 50.0 0.00 0.00 0.00 4.40 F
3085 5437 0.107456 CCTATGATGCTGGCCTCGTT 59.893 55.0 3.32 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2101 4417 0.840722 GGGAGAAGAAGGTGTGGGGA 60.841 60.000 0.0 0.0 0.00 4.81 R
2168 4484 1.614241 ATCTTGGGGTCGAACTCCGG 61.614 60.000 0.0 0.0 43.44 5.14 R
2678 5021 0.108377 TCGTAGCGTCCATTGCACAT 60.108 50.000 0.0 0.0 33.85 3.21 R
3085 5437 1.367471 CACTCGGTGCTTGTCCTGA 59.633 57.895 0.0 0.0 0.00 3.86 R
3620 5978 6.152323 TCAGATACTATTAATGGAGTACCGGC 59.848 42.308 0.0 0.0 39.42 6.13 R
4981 7488 0.037303 AGTGATGTTGGCTCCTGTGG 59.963 55.000 0.0 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 6.037610 CCCCTTAATTTTTCATGTCTCTCTCG 59.962 42.308 0.00 0.00 0.00 4.04
78 79 4.945246 TCTCGTCCACATAGGCTAAATTC 58.055 43.478 0.00 0.00 37.29 2.17
91 92 2.293399 GCTAAATTCCCATGTAAGCGGG 59.707 50.000 0.00 0.00 44.60 6.13
92 93 2.525105 AAATTCCCATGTAAGCGGGT 57.475 45.000 0.00 0.00 43.57 5.28
103 104 4.145365 TGTAAGCGGGTTATAAGCATGT 57.855 40.909 16.07 1.64 0.00 3.21
108 109 5.689383 AGCGGGTTATAAGCATGTTATTG 57.311 39.130 16.07 0.00 0.00 1.90
114 115 8.067784 CGGGTTATAAGCATGTTATTGTACTTG 58.932 37.037 16.07 0.00 0.00 3.16
133 134 8.689061 TGTACTTGCTCTTATCCGACTTATTAA 58.311 33.333 0.00 0.00 0.00 1.40
185 186 2.349155 GGCCGTTACTTTTTCAGACACG 60.349 50.000 0.00 0.00 33.64 4.49
192 193 4.351131 ACTTTTTCAGACACGTGGAAAC 57.649 40.909 21.57 8.25 30.86 2.78
203 204 2.099921 CACGTGGAAACCATTGGAAACA 59.900 45.455 10.37 0.00 35.28 2.83
229 234 9.740239 AAGCACAACTTATTATTAATGCATGAG 57.260 29.630 0.00 0.00 36.62 2.90
310 315 8.565416 GTCTAATTGATCAGATTCATCAATGCA 58.435 33.333 11.08 0.00 46.01 3.96
325 333 7.953752 TCATCAATGCAGGCATTCATAATTTA 58.046 30.769 16.09 0.00 43.92 1.40
358 366 3.370978 TGATTACGAGCTGCAAAACTAGC 59.629 43.478 1.02 0.00 40.18 3.42
397 405 2.781923 TCTAGCTTTGCTTCACATGCA 58.218 42.857 0.00 0.00 40.44 3.96
398 406 3.349927 TCTAGCTTTGCTTCACATGCAT 58.650 40.909 0.00 0.00 40.44 3.96
426 434 1.335324 GCACCTTGCTGCAAGTGTAAG 60.335 52.381 33.16 22.56 40.96 2.34
469 477 8.379457 AGTTAAACAACACTTACTTCAGATCC 57.621 34.615 0.00 0.00 0.00 3.36
493 501 0.253044 TGTCCATAAGGAGGTGCAGC 59.747 55.000 8.11 8.11 46.92 5.25
496 504 0.034186 CCATAAGGAGGTGCAGCCAA 60.034 55.000 13.29 0.00 40.61 4.52
497 505 1.410648 CCATAAGGAGGTGCAGCCAAT 60.411 52.381 13.29 0.00 40.61 3.16
498 506 2.381911 CATAAGGAGGTGCAGCCAATT 58.618 47.619 13.29 7.27 40.61 2.32
499 507 1.838112 TAAGGAGGTGCAGCCAATTG 58.162 50.000 13.29 0.00 40.61 2.32
500 508 0.901580 AAGGAGGTGCAGCCAATTGG 60.902 55.000 20.81 20.81 40.61 3.16
501 509 1.607467 GGAGGTGCAGCCAATTGGT 60.607 57.895 25.19 9.82 40.61 3.67
502 510 1.187567 GGAGGTGCAGCCAATTGGTT 61.188 55.000 25.19 17.51 40.61 3.67
503 511 0.681175 GAGGTGCAGCCAATTGGTTT 59.319 50.000 25.19 11.70 40.61 3.27
504 512 1.070601 GAGGTGCAGCCAATTGGTTTT 59.929 47.619 25.19 9.19 40.61 2.43
506 514 2.703007 AGGTGCAGCCAATTGGTTTTTA 59.297 40.909 25.19 5.66 40.61 1.52
507 515 3.327464 AGGTGCAGCCAATTGGTTTTTAT 59.673 39.130 25.19 4.51 40.61 1.40
509 517 5.189539 AGGTGCAGCCAATTGGTTTTTATAT 59.810 36.000 25.19 3.88 40.61 0.86
510 518 5.294060 GGTGCAGCCAATTGGTTTTTATATG 59.706 40.000 25.19 7.22 37.57 1.78
511 519 4.874966 TGCAGCCAATTGGTTTTTATATGC 59.125 37.500 25.19 16.60 37.57 3.14
512 520 5.118286 GCAGCCAATTGGTTTTTATATGCT 58.882 37.500 25.19 9.28 37.57 3.79
513 521 5.006941 GCAGCCAATTGGTTTTTATATGCTG 59.993 40.000 25.19 20.21 43.87 4.41
514 522 6.339730 CAGCCAATTGGTTTTTATATGCTGA 58.660 36.000 25.19 0.00 43.78 4.26
515 523 6.987992 CAGCCAATTGGTTTTTATATGCTGAT 59.012 34.615 25.19 0.00 43.78 2.90
516 524 7.170320 CAGCCAATTGGTTTTTATATGCTGATC 59.830 37.037 25.19 2.74 43.78 2.92
517 525 6.985645 GCCAATTGGTTTTTATATGCTGATCA 59.014 34.615 25.19 0.00 37.57 2.92
518 526 7.658575 GCCAATTGGTTTTTATATGCTGATCAT 59.341 33.333 25.19 0.00 37.04 2.45
519 527 8.984764 CCAATTGGTTTTTATATGCTGATCATG 58.015 33.333 16.90 0.00 36.63 3.07
520 528 9.537192 CAATTGGTTTTTATATGCTGATCATGT 57.463 29.630 0.00 0.00 36.63 3.21
521 529 9.537192 AATTGGTTTTTATATGCTGATCATGTG 57.463 29.630 0.00 0.00 36.63 3.21
522 530 6.506147 TGGTTTTTATATGCTGATCATGTGC 58.494 36.000 0.00 0.00 36.63 4.57
523 531 6.321945 TGGTTTTTATATGCTGATCATGTGCT 59.678 34.615 0.00 0.00 36.63 4.40
524 532 6.639686 GGTTTTTATATGCTGATCATGTGCTG 59.360 38.462 0.00 0.00 36.63 4.41
525 533 5.366829 TTTATATGCTGATCATGTGCTGC 57.633 39.130 0.00 10.68 36.63 5.25
526 534 2.632987 TATGCTGATCATGTGCTGCT 57.367 45.000 15.76 7.94 36.63 4.24
527 535 1.763968 ATGCTGATCATGTGCTGCTT 58.236 45.000 15.76 9.79 33.26 3.91
528 536 0.808755 TGCTGATCATGTGCTGCTTG 59.191 50.000 15.76 0.00 0.00 4.01
529 537 0.100682 GCTGATCATGTGCTGCTTGG 59.899 55.000 0.00 0.00 0.00 3.61
530 538 0.100682 CTGATCATGTGCTGCTTGGC 59.899 55.000 0.00 0.00 0.00 4.52
531 539 0.609681 TGATCATGTGCTGCTTGGCA 60.610 50.000 0.00 0.00 40.15 4.92
532 540 0.528924 GATCATGTGCTGCTTGGCAA 59.471 50.000 0.00 0.00 44.18 4.52
533 541 0.530744 ATCATGTGCTGCTTGGCAAG 59.469 50.000 22.75 22.75 44.18 4.01
534 542 0.824595 TCATGTGCTGCTTGGCAAGT 60.825 50.000 26.71 3.77 44.18 3.16
535 543 0.032952 CATGTGCTGCTTGGCAAGTT 59.967 50.000 26.71 2.83 44.18 2.66
536 544 0.032952 ATGTGCTGCTTGGCAAGTTG 59.967 50.000 26.71 19.81 44.18 3.16
537 545 1.952635 GTGCTGCTTGGCAAGTTGC 60.953 57.895 26.71 27.02 44.18 4.17
546 554 3.051210 GCAAGTTGCCTCAACCCC 58.949 61.111 17.36 0.00 44.49 4.95
547 555 1.832167 GCAAGTTGCCTCAACCCCA 60.832 57.895 17.36 0.00 44.49 4.96
548 556 1.187567 GCAAGTTGCCTCAACCCCAT 61.188 55.000 17.36 0.00 44.49 4.00
549 557 0.890683 CAAGTTGCCTCAACCCCATC 59.109 55.000 6.12 0.00 44.49 3.51
550 558 0.779997 AAGTTGCCTCAACCCCATCT 59.220 50.000 6.12 0.00 44.49 2.90
551 559 0.038744 AGTTGCCTCAACCCCATCTG 59.961 55.000 6.12 0.00 44.49 2.90
552 560 1.304381 TTGCCTCAACCCCATCTGC 60.304 57.895 0.00 0.00 0.00 4.26
553 561 1.792757 TTGCCTCAACCCCATCTGCT 61.793 55.000 0.00 0.00 0.00 4.24
554 562 1.751927 GCCTCAACCCCATCTGCTG 60.752 63.158 0.00 0.00 0.00 4.41
555 563 1.751927 CCTCAACCCCATCTGCTGC 60.752 63.158 0.00 0.00 0.00 5.25
556 564 1.001764 CTCAACCCCATCTGCTGCA 60.002 57.895 0.88 0.88 0.00 4.41
557 565 0.609957 CTCAACCCCATCTGCTGCAA 60.610 55.000 3.02 0.00 0.00 4.08
558 566 0.040058 TCAACCCCATCTGCTGCAAT 59.960 50.000 3.02 0.00 0.00 3.56
559 567 0.174845 CAACCCCATCTGCTGCAATG 59.825 55.000 3.02 10.27 0.00 2.82
560 568 0.040058 AACCCCATCTGCTGCAATGA 59.960 50.000 19.41 9.50 0.00 2.57
561 569 0.260816 ACCCCATCTGCTGCAATGAT 59.739 50.000 19.41 11.10 0.00 2.45
562 570 1.496001 ACCCCATCTGCTGCAATGATA 59.504 47.619 19.41 0.23 0.00 2.15
563 571 2.109480 ACCCCATCTGCTGCAATGATAT 59.891 45.455 19.41 7.24 0.00 1.63
564 572 2.753452 CCCCATCTGCTGCAATGATATC 59.247 50.000 19.41 0.00 0.00 1.63
565 573 3.561528 CCCCATCTGCTGCAATGATATCT 60.562 47.826 19.41 0.00 0.00 1.98
566 574 3.440522 CCCATCTGCTGCAATGATATCTG 59.559 47.826 19.41 0.00 0.00 2.90
567 575 4.072839 CCATCTGCTGCAATGATATCTGT 58.927 43.478 19.41 0.00 0.00 3.41
568 576 4.083271 CCATCTGCTGCAATGATATCTGTG 60.083 45.833 19.41 3.28 0.00 3.66
569 577 4.146745 TCTGCTGCAATGATATCTGTGT 57.853 40.909 3.02 0.00 0.00 3.72
570 578 3.875134 TCTGCTGCAATGATATCTGTGTG 59.125 43.478 3.02 0.00 0.00 3.82
571 579 3.613030 TGCTGCAATGATATCTGTGTGT 58.387 40.909 0.00 0.00 0.00 3.72
572 580 4.768583 TGCTGCAATGATATCTGTGTGTA 58.231 39.130 0.00 0.00 0.00 2.90
573 581 5.184711 TGCTGCAATGATATCTGTGTGTAA 58.815 37.500 0.00 0.00 0.00 2.41
574 582 5.647225 TGCTGCAATGATATCTGTGTGTAAA 59.353 36.000 0.00 0.00 0.00 2.01
575 583 6.183360 TGCTGCAATGATATCTGTGTGTAAAG 60.183 38.462 0.00 0.00 0.00 1.85
576 584 6.122850 TGCAATGATATCTGTGTGTAAAGC 57.877 37.500 3.98 0.00 0.00 3.51
577 585 5.647225 TGCAATGATATCTGTGTGTAAAGCA 59.353 36.000 3.98 0.00 0.00 3.91
578 586 6.319405 TGCAATGATATCTGTGTGTAAAGCAT 59.681 34.615 3.98 0.00 0.00 3.79
579 587 6.635641 GCAATGATATCTGTGTGTAAAGCATG 59.364 38.462 3.98 0.00 0.00 4.06
580 588 7.680350 GCAATGATATCTGTGTGTAAAGCATGT 60.680 37.037 3.98 0.00 0.00 3.21
581 589 6.908870 TGATATCTGTGTGTAAAGCATGTC 57.091 37.500 3.98 0.00 0.00 3.06
582 590 5.817296 TGATATCTGTGTGTAAAGCATGTCC 59.183 40.000 3.98 0.00 0.00 4.02
583 591 2.778299 TCTGTGTGTAAAGCATGTCCC 58.222 47.619 0.00 0.00 0.00 4.46
584 592 2.105649 TCTGTGTGTAAAGCATGTCCCA 59.894 45.455 0.00 0.00 0.00 4.37
585 593 3.084039 CTGTGTGTAAAGCATGTCCCAT 58.916 45.455 0.00 0.00 0.00 4.00
586 594 3.081061 TGTGTGTAAAGCATGTCCCATC 58.919 45.455 0.00 0.00 0.00 3.51
587 595 3.244875 TGTGTGTAAAGCATGTCCCATCT 60.245 43.478 0.00 0.00 0.00 2.90
588 596 3.758554 GTGTGTAAAGCATGTCCCATCTT 59.241 43.478 0.00 0.00 0.00 2.40
589 597 3.758023 TGTGTAAAGCATGTCCCATCTTG 59.242 43.478 0.00 0.00 0.00 3.02
590 598 4.009675 GTGTAAAGCATGTCCCATCTTGA 58.990 43.478 0.00 0.00 0.00 3.02
591 599 4.458989 GTGTAAAGCATGTCCCATCTTGAA 59.541 41.667 0.00 0.00 0.00 2.69
592 600 5.126061 GTGTAAAGCATGTCCCATCTTGAAT 59.874 40.000 0.00 0.00 0.00 2.57
593 601 4.996788 AAAGCATGTCCCATCTTGAATC 57.003 40.909 0.00 0.00 0.00 2.52
594 602 3.947612 AGCATGTCCCATCTTGAATCT 57.052 42.857 0.00 0.00 0.00 2.40
595 603 5.378230 AAGCATGTCCCATCTTGAATCTA 57.622 39.130 0.00 0.00 0.00 1.98
596 604 4.712476 AGCATGTCCCATCTTGAATCTAC 58.288 43.478 0.00 0.00 0.00 2.59
597 605 4.164796 AGCATGTCCCATCTTGAATCTACA 59.835 41.667 0.00 0.00 0.00 2.74
598 606 5.068636 GCATGTCCCATCTTGAATCTACAT 58.931 41.667 0.00 0.00 0.00 2.29
599 607 5.180868 GCATGTCCCATCTTGAATCTACATC 59.819 44.000 0.00 0.00 0.00 3.06
600 608 6.531923 CATGTCCCATCTTGAATCTACATCT 58.468 40.000 0.00 0.00 0.00 2.90
601 609 6.566079 TGTCCCATCTTGAATCTACATCTT 57.434 37.500 0.00 0.00 0.00 2.40
602 610 7.675161 TGTCCCATCTTGAATCTACATCTTA 57.325 36.000 0.00 0.00 0.00 2.10
603 611 7.730084 TGTCCCATCTTGAATCTACATCTTAG 58.270 38.462 0.00 0.00 0.00 2.18
604 612 7.565029 TGTCCCATCTTGAATCTACATCTTAGA 59.435 37.037 0.00 0.00 0.00 2.10
605 613 8.087750 GTCCCATCTTGAATCTACATCTTAGAG 58.912 40.741 0.00 0.00 0.00 2.43
606 614 6.873076 CCCATCTTGAATCTACATCTTAGAGC 59.127 42.308 0.00 0.00 0.00 4.09
615 623 3.258971 ACATCTTAGAGCAACTCTGGC 57.741 47.619 7.37 0.00 41.37 4.85
623 631 0.990374 AGCAACTCTGGCAGATCCTT 59.010 50.000 19.11 7.01 35.26 3.36
624 632 1.065564 AGCAACTCTGGCAGATCCTTC 60.066 52.381 19.11 6.72 35.26 3.46
833 858 5.712004 CAAGTGGCACATGATGAATTAACA 58.288 37.500 21.41 0.00 44.52 2.41
838 863 8.786898 AGTGGCACATGATGAATTAACATATAC 58.213 33.333 21.41 0.00 44.52 1.47
839 864 8.567104 GTGGCACATGATGAATTAACATATACA 58.433 33.333 13.86 0.00 44.52 2.29
918 1054 2.735151 TCGATGAACTTAGCCTCCAGA 58.265 47.619 0.00 0.00 0.00 3.86
1000 1802 0.036875 ACTGCCTAGCAACACCCTTC 59.963 55.000 0.00 0.00 38.41 3.46
1137 1952 2.690778 GCTCCACGGCACCATCAAC 61.691 63.158 0.00 0.00 0.00 3.18
1150 1965 1.640428 CATCAACGCTACCATCGTGT 58.360 50.000 0.00 0.00 40.36 4.49
1217 2032 0.392461 GGCTTCCTCGGCAATGTACA 60.392 55.000 0.00 0.00 0.00 2.90
1235 2059 7.687941 ATGTACATCCGTTCTTGATCTTTTT 57.312 32.000 1.41 0.00 0.00 1.94
1268 2117 6.206600 TGTAGTTTTAAATAGCGCGCTATC 57.793 37.500 43.67 31.90 38.20 2.08
1270 2119 5.577860 AGTTTTAAATAGCGCGCTATCTC 57.422 39.130 43.67 29.49 38.20 2.75
1271 2120 4.148348 AGTTTTAAATAGCGCGCTATCTCG 59.852 41.667 43.67 0.00 38.20 4.04
1272 2121 2.257974 TAAATAGCGCGCTATCTCGG 57.742 50.000 43.67 0.00 38.20 4.63
1273 2122 1.009389 AAATAGCGCGCTATCTCGGC 61.009 55.000 43.67 10.24 38.20 5.54
1296 2280 2.507407 ATACCGTTTGGAGTGGCATT 57.493 45.000 0.00 0.00 39.21 3.56
1354 2340 3.188895 GCTATAGCGCAATTTAGCACC 57.811 47.619 11.47 0.00 37.57 5.01
1358 2344 0.035056 AGCGCAATTTAGCACCCTCT 60.035 50.000 11.47 0.00 35.48 3.69
1374 3474 5.628134 CACCCTCTTTTTGTCGCTATTTAC 58.372 41.667 0.00 0.00 0.00 2.01
1420 3521 4.811908 TGTTTGCACTTCATGATGAATGG 58.188 39.130 15.03 5.21 35.59 3.16
1421 3522 4.281435 TGTTTGCACTTCATGATGAATGGT 59.719 37.500 15.03 1.24 35.59 3.55
1422 3523 5.221481 TGTTTGCACTTCATGATGAATGGTT 60.221 36.000 15.03 0.00 35.59 3.67
1423 3524 6.015603 TGTTTGCACTTCATGATGAATGGTTA 60.016 34.615 15.03 0.00 35.59 2.85
1455 3556 6.886178 AACTAGAAGCAATTAGTTCCCCTA 57.114 37.500 0.00 0.00 35.74 3.53
1456 3557 7.453141 AACTAGAAGCAATTAGTTCCCCTAT 57.547 36.000 0.00 0.00 35.74 2.57
1457 3558 6.831976 ACTAGAAGCAATTAGTTCCCCTATG 58.168 40.000 0.00 0.00 0.00 2.23
1493 3594 9.903682 CAATGTGTATGTCTTCTTGATCTTTTT 57.096 29.630 0.00 0.00 0.00 1.94
1495 3596 8.675705 TGTGTATGTCTTCTTGATCTTTTTCA 57.324 30.769 0.00 0.00 0.00 2.69
1496 3597 8.777413 TGTGTATGTCTTCTTGATCTTTTTCAG 58.223 33.333 0.00 0.00 0.00 3.02
1498 3599 8.993121 TGTATGTCTTCTTGATCTTTTTCAGTC 58.007 33.333 0.00 0.00 0.00 3.51
1499 3600 9.213799 GTATGTCTTCTTGATCTTTTTCAGTCT 57.786 33.333 0.00 0.00 0.00 3.24
1501 3602 8.594881 TGTCTTCTTGATCTTTTTCAGTCTAC 57.405 34.615 0.00 0.00 0.00 2.59
1528 3680 0.312729 CACCAAACCGTTTAGCACCC 59.687 55.000 0.00 0.00 0.00 4.61
1529 3681 0.824595 ACCAAACCGTTTAGCACCCC 60.825 55.000 0.00 0.00 0.00 4.95
1530 3682 0.824182 CCAAACCGTTTAGCACCCCA 60.824 55.000 0.00 0.00 0.00 4.96
1532 3684 1.616374 CAAACCGTTTAGCACCCCATT 59.384 47.619 0.00 0.00 0.00 3.16
1533 3685 2.820787 CAAACCGTTTAGCACCCCATTA 59.179 45.455 0.00 0.00 0.00 1.90
1534 3686 2.883122 ACCGTTTAGCACCCCATTAA 57.117 45.000 0.00 0.00 0.00 1.40
1535 3687 2.439409 ACCGTTTAGCACCCCATTAAC 58.561 47.619 0.00 0.00 0.00 2.01
1536 3688 1.399089 CCGTTTAGCACCCCATTAACG 59.601 52.381 0.00 0.00 38.36 3.18
1538 3690 1.813786 GTTTAGCACCCCATTAACGCA 59.186 47.619 0.00 0.00 0.00 5.24
1540 3692 0.616371 TAGCACCCCATTAACGCACT 59.384 50.000 0.00 0.00 0.00 4.40
1541 3693 0.616371 AGCACCCCATTAACGCACTA 59.384 50.000 0.00 0.00 0.00 2.74
1546 3698 4.619628 GCACCCCATTAACGCACTATTTTT 60.620 41.667 0.00 0.00 0.00 1.94
1547 3699 4.862018 CACCCCATTAACGCACTATTTTTG 59.138 41.667 0.00 0.00 0.00 2.44
1556 3708 3.422890 GCACTATTTTTGCGCTGTTTG 57.577 42.857 9.73 0.00 0.00 2.93
1558 3710 3.245048 GCACTATTTTTGCGCTGTTTGTT 59.755 39.130 9.73 0.00 0.00 2.83
1559 3711 4.442733 GCACTATTTTTGCGCTGTTTGTTA 59.557 37.500 9.73 0.00 0.00 2.41
1569 3721 2.292016 CGCTGTTTGTTATTGGGTGTGA 59.708 45.455 0.00 0.00 0.00 3.58
1574 3726 5.931294 TGTTTGTTATTGGGTGTGACTAGA 58.069 37.500 0.00 0.00 0.00 2.43
1603 3903 7.093354 CAGTCAACTGAGATTTAGCAAGACTA 58.907 38.462 4.05 0.00 46.59 2.59
1837 4138 3.917760 GAGCCACTCCGCGCCTAT 61.918 66.667 0.00 0.00 0.00 2.57
2224 4540 2.911143 CTCTACAAGCCCGGGCAT 59.089 61.111 45.13 34.11 44.88 4.40
2367 4695 3.130160 GCTCCTGAAGCGCAAGGG 61.130 66.667 19.83 11.91 42.21 3.95
2546 4880 1.957177 TCAGAGGCTACATCATCGACC 59.043 52.381 0.00 0.00 0.00 4.79
2794 5137 4.755614 GACGAGGACGCGACGCTT 62.756 66.667 15.93 8.77 43.96 4.68
2848 5191 2.669133 CCATGCCAAGGTCGAGGGA 61.669 63.158 0.00 0.00 0.00 4.20
3073 5425 0.697079 CCATGGAGGCTGCCTATGAT 59.303 55.000 25.91 14.64 31.76 2.45
3076 5428 1.058428 TGGAGGCTGCCTATGATGCT 61.058 55.000 23.44 0.00 31.76 3.79
3085 5437 0.107456 CCTATGATGCTGGCCTCGTT 59.893 55.000 3.32 0.00 0.00 3.85
3619 5977 6.136155 TCACTCCAAGATGATGATAGGTACA 58.864 40.000 0.00 0.00 0.00 2.90
3620 5978 6.266330 TCACTCCAAGATGATGATAGGTACAG 59.734 42.308 0.00 0.00 0.00 2.74
3621 5979 5.011533 ACTCCAAGATGATGATAGGTACAGC 59.988 44.000 0.00 0.00 0.00 4.40
3622 5980 4.284490 TCCAAGATGATGATAGGTACAGCC 59.716 45.833 0.00 0.00 37.58 4.85
3638 6019 4.602340 ACAGCCGGTACTCCATTAATAG 57.398 45.455 1.90 0.00 0.00 1.73
3639 6020 3.965347 ACAGCCGGTACTCCATTAATAGT 59.035 43.478 1.90 0.00 0.00 2.12
3640 6021 5.142639 ACAGCCGGTACTCCATTAATAGTA 58.857 41.667 1.90 0.00 0.00 1.82
3641 6022 5.778750 ACAGCCGGTACTCCATTAATAGTAT 59.221 40.000 1.90 0.00 31.25 2.12
3642 6023 6.071503 ACAGCCGGTACTCCATTAATAGTATC 60.072 42.308 1.90 1.22 31.25 2.24
3643 6024 6.153000 CAGCCGGTACTCCATTAATAGTATCT 59.847 42.308 1.90 0.16 31.25 1.98
3644 6025 6.153000 AGCCGGTACTCCATTAATAGTATCTG 59.847 42.308 1.90 2.85 31.25 2.90
3645 6026 6.152323 GCCGGTACTCCATTAATAGTATCTGA 59.848 42.308 1.90 0.00 31.25 3.27
3646 6027 7.147880 GCCGGTACTCCATTAATAGTATCTGAT 60.148 40.741 1.90 0.00 31.25 2.90
3647 6028 8.191446 CCGGTACTCCATTAATAGTATCTGATG 58.809 40.741 0.00 0.00 31.25 3.07
3648 6029 8.740906 CGGTACTCCATTAATAGTATCTGATGT 58.259 37.037 0.00 0.00 31.25 3.06
3723 6122 4.926238 GTCTCGTCTTGTTCAGTTGATGAT 59.074 41.667 0.00 0.00 37.89 2.45
3732 6131 7.879677 TCTTGTTCAGTTGATGATGAGTACATT 59.120 33.333 0.00 0.00 37.89 2.71
3771 6170 4.778143 AACGAGCGGTCCATGGCC 62.778 66.667 6.96 11.03 0.00 5.36
3804 6203 2.663188 GAGATCGCCATCGGTGCC 60.663 66.667 0.00 0.00 33.75 5.01
4014 6413 3.450115 CTCACGGACGACCTCCCC 61.450 72.222 1.72 0.00 35.21 4.81
4077 6476 1.313812 CGGTCTCTACGCTCAAGGGT 61.314 60.000 5.03 5.03 43.82 4.34
4170 6577 8.853077 TGAGCATATAGATCCTGGTTAATTTG 57.147 34.615 0.00 0.00 0.00 2.32
4171 6578 7.391554 TGAGCATATAGATCCTGGTTAATTTGC 59.608 37.037 0.00 1.14 0.00 3.68
4172 6579 7.465116 AGCATATAGATCCTGGTTAATTTGCT 58.535 34.615 9.65 9.65 30.26 3.91
4173 6580 7.392673 AGCATATAGATCCTGGTTAATTTGCTG 59.607 37.037 12.54 0.00 32.74 4.41
4174 6581 7.533426 CATATAGATCCTGGTTAATTTGCTGC 58.467 38.462 0.00 0.00 0.00 5.25
4175 6582 3.973425 AGATCCTGGTTAATTTGCTGCT 58.027 40.909 0.00 0.00 0.00 4.24
4176 6583 3.950395 AGATCCTGGTTAATTTGCTGCTC 59.050 43.478 0.00 0.00 0.00 4.26
4177 6584 2.446435 TCCTGGTTAATTTGCTGCTCC 58.554 47.619 0.00 0.00 0.00 4.70
4178 6585 2.041620 TCCTGGTTAATTTGCTGCTCCT 59.958 45.455 0.00 0.00 0.00 3.69
4179 6586 3.265737 TCCTGGTTAATTTGCTGCTCCTA 59.734 43.478 0.00 0.00 0.00 2.94
4180 6587 3.629398 CCTGGTTAATTTGCTGCTCCTAG 59.371 47.826 0.00 0.00 0.00 3.02
4188 6601 0.757188 TGCTGCTCCTAGTCCTAGCC 60.757 60.000 0.00 0.00 35.33 3.93
4202 6622 5.431765 AGTCCTAGCCAGTGTTGATTAATG 58.568 41.667 0.00 0.00 0.00 1.90
4213 6633 1.667236 TGATTAATGCTGGCACCTCG 58.333 50.000 0.00 0.00 0.00 4.63
4214 6634 1.209261 TGATTAATGCTGGCACCTCGA 59.791 47.619 0.00 0.00 0.00 4.04
4225 6648 2.089980 GGCACCTCGACTGTCTTAGTA 58.910 52.381 6.21 0.00 40.53 1.82
4226 6649 2.097791 GGCACCTCGACTGTCTTAGTAG 59.902 54.545 6.21 0.30 40.53 2.57
4227 6650 2.748532 GCACCTCGACTGTCTTAGTAGT 59.251 50.000 6.21 0.00 40.53 2.73
4228 6651 3.181508 GCACCTCGACTGTCTTAGTAGTC 60.182 52.174 6.21 8.52 40.53 2.59
4235 6658 5.585445 TCGACTGTCTTAGTAGTCAGGATTC 59.415 44.000 15.33 0.00 42.62 2.52
4248 6680 6.814506 AGTCAGGATTCAGTGATTTTCTTG 57.185 37.500 0.00 0.00 0.00 3.02
4312 6747 2.196749 CACGATTTGTGGGAGAGATCG 58.803 52.381 0.00 0.00 45.21 3.69
4314 6749 1.409064 CGATTTGTGGGAGAGATCGGA 59.591 52.381 0.00 0.00 36.79 4.55
4315 6750 2.799917 CGATTTGTGGGAGAGATCGGAC 60.800 54.545 0.00 0.00 36.79 4.79
4318 6803 1.114627 TGTGGGAGAGATCGGACATG 58.885 55.000 0.00 0.00 0.00 3.21
4325 6810 0.596083 GAGATCGGACATGAGCACGG 60.596 60.000 0.00 0.00 0.00 4.94
4387 6872 1.452110 TGCAGACATTTATGCAGCGT 58.548 45.000 0.00 0.00 46.97 5.07
4397 6882 6.904498 ACATTTATGCAGCGTAAAAACACTA 58.096 32.000 21.11 0.07 30.20 2.74
4404 6889 5.080068 GCAGCGTAAAAACACTATCTTGAC 58.920 41.667 0.00 0.00 0.00 3.18
4506 7009 5.964958 AACCACAGGAGAAACAATATGTG 57.035 39.130 0.00 0.00 38.17 3.21
4512 7015 7.067859 CCACAGGAGAAACAATATGTGATTGAT 59.932 37.037 4.78 0.00 40.27 2.57
4583 7086 8.154203 TCTGTGGAGAAACTATATGTCAACAAA 58.846 33.333 0.00 0.00 0.00 2.83
4600 7103 1.734465 CAAAGGTCTCAAAGCGCTAGG 59.266 52.381 12.05 6.04 0.00 3.02
4613 7116 1.468914 GCGCTAGGAAACCTTTTCTGG 59.531 52.381 0.00 0.00 34.61 3.86
4646 7149 4.860907 CAGCAAGCAAATACAGAATTGACC 59.139 41.667 0.00 0.00 0.00 4.02
4651 7154 4.522789 AGCAAATACAGAATTGACCGGTTT 59.477 37.500 9.42 0.00 0.00 3.27
4669 7172 5.648960 CCGGTTTATAAGAAAAACTAGGCCA 59.351 40.000 5.01 0.00 37.09 5.36
4672 7175 8.083462 CGGTTTATAAGAAAAACTAGGCCAAAA 58.917 33.333 5.01 0.00 37.09 2.44
4686 7189 7.787028 ACTAGGCCAAAAACTAACATGAAAAA 58.213 30.769 5.01 0.00 0.00 1.94
4687 7190 8.428852 ACTAGGCCAAAAACTAACATGAAAAAT 58.571 29.630 5.01 0.00 0.00 1.82
4714 7221 3.057526 GCTGTCAAAAATAGACCACCACC 60.058 47.826 0.00 0.00 35.15 4.61
4721 7228 6.011981 TCAAAAATAGACCACCACCTCCTAAT 60.012 38.462 0.00 0.00 0.00 1.73
4730 7237 4.560128 CACCACCTCCTAATATGACATCG 58.440 47.826 0.00 0.00 0.00 3.84
4735 7242 3.832490 CCTCCTAATATGACATCGACCCA 59.168 47.826 0.00 0.00 0.00 4.51
4736 7243 4.081972 CCTCCTAATATGACATCGACCCAG 60.082 50.000 0.00 0.00 0.00 4.45
4737 7244 4.736473 TCCTAATATGACATCGACCCAGA 58.264 43.478 0.00 0.00 0.00 3.86
4741 7248 0.463204 ATGACATCGACCCAGAGCAG 59.537 55.000 0.00 0.00 0.00 4.24
4758 7265 4.934602 AGAGCAGTTGTAAGCAAGATCTTC 59.065 41.667 4.57 0.94 34.94 2.87
4759 7266 4.645535 AGCAGTTGTAAGCAAGATCTTCA 58.354 39.130 4.57 0.00 34.94 3.02
4773 7280 6.460123 GCAAGATCTTCAAAGACACCTTCAAA 60.460 38.462 4.57 0.00 37.98 2.69
4776 7283 7.484140 AGATCTTCAAAGACACCTTCAAAAAC 58.516 34.615 0.00 0.00 37.98 2.43
4777 7284 6.582677 TCTTCAAAGACACCTTCAAAAACA 57.417 33.333 0.00 0.00 0.00 2.83
4778 7285 6.987386 TCTTCAAAGACACCTTCAAAAACAA 58.013 32.000 0.00 0.00 0.00 2.83
4803 7310 2.488836 AGGGTTTCCAAGGATACCGAT 58.511 47.619 18.50 9.84 43.89 4.18
4817 7324 1.449423 CCGATGTCACCGGCATTCA 60.449 57.895 0.00 0.00 40.54 2.57
4839 7346 2.561569 CCCCGTCGATCAATAAGCTTT 58.438 47.619 3.20 0.00 0.00 3.51
4846 7353 5.864474 CGTCGATCAATAAGCTTTAGCCTAT 59.136 40.000 3.20 0.00 43.38 2.57
4852 7359 7.329746 TCAATAAGCTTTAGCCTATACCCAT 57.670 36.000 3.20 0.00 43.38 4.00
4855 7362 2.076863 GCTTTAGCCTATACCCATGCG 58.923 52.381 0.00 0.00 34.31 4.73
4877 7384 2.265182 CCGCCCAACCGAACATTGT 61.265 57.895 0.00 0.00 0.00 2.71
4887 7394 2.225491 ACCGAACATTGTGAAATGTCCG 59.775 45.455 3.59 3.59 42.13 4.79
4917 7424 2.147387 AACCTCCAACGCCACTCCT 61.147 57.895 0.00 0.00 0.00 3.69
4918 7425 2.113243 AACCTCCAACGCCACTCCTC 62.113 60.000 0.00 0.00 0.00 3.71
4922 7429 1.079543 CCAACGCCACTCCTCTCTG 60.080 63.158 0.00 0.00 0.00 3.35
4923 7430 1.079543 CAACGCCACTCCTCTCTGG 60.080 63.158 0.00 0.00 37.10 3.86
4933 7440 4.463879 CTCTCTGGCCGGCCACAG 62.464 72.222 44.23 40.36 41.89 3.66
4955 7462 7.380065 CACAGCCTAATAGAAATACTCTTCGAC 59.620 40.741 0.00 0.00 35.41 4.20
4981 7488 1.645710 TCCAAGAGAAGGAGGACACC 58.354 55.000 0.00 0.00 0.00 4.16
5010 7517 1.955778 CCAACATCACTGGCAAAGACA 59.044 47.619 0.00 0.00 0.00 3.41
5025 7532 4.036734 GCAAAGACATGTCCAAGAACAAGA 59.963 41.667 22.21 0.00 31.81 3.02
5027 7534 3.744660 AGACATGTCCAAGAACAAGACC 58.255 45.455 22.21 0.00 31.81 3.85
5041 7564 0.546988 AAGACCTACCCCACCACCTC 60.547 60.000 0.00 0.00 0.00 3.85
5049 7572 3.252284 CCACCACCTCTGGCTGGT 61.252 66.667 5.46 5.46 42.08 4.00
5058 7581 1.558756 CCTCTGGCTGGTCAATTCTCT 59.441 52.381 0.00 0.00 0.00 3.10
5076 7599 2.681848 CTCTAGTCTGCCTTGGCAATTG 59.318 50.000 15.63 0.00 0.00 2.32
5112 7635 3.125520 GGTCAAAGTCTTTGCCCCA 57.874 52.632 18.80 0.77 40.43 4.96
5153 7676 4.099881 AGAAACAAAGCCTCAAATCTTGCA 59.900 37.500 0.00 0.00 0.00 4.08
5154 7677 3.375782 ACAAAGCCTCAAATCTTGCAC 57.624 42.857 0.00 0.00 0.00 4.57
5156 7679 3.005155 ACAAAGCCTCAAATCTTGCACTC 59.995 43.478 0.00 0.00 0.00 3.51
5187 7710 5.452078 TTCAAAAGGCACTGGACTATTTG 57.548 39.130 0.00 0.00 40.86 2.32
5193 7718 2.289565 GCACTGGACTATTTGCCCTAC 58.710 52.381 0.00 0.00 0.00 3.18
5209 7734 8.797350 TTTGCCCTACTAAACTAAACTAATCC 57.203 34.615 0.00 0.00 0.00 3.01
5210 7735 7.744678 TGCCCTACTAAACTAAACTAATCCT 57.255 36.000 0.00 0.00 0.00 3.24
5211 7736 8.843308 TGCCCTACTAAACTAAACTAATCCTA 57.157 34.615 0.00 0.00 0.00 2.94
5212 7737 8.921205 TGCCCTACTAAACTAAACTAATCCTAG 58.079 37.037 0.00 0.00 0.00 3.02
5213 7738 8.366401 GCCCTACTAAACTAAACTAATCCTAGG 58.634 40.741 0.82 0.82 0.00 3.02
5214 7739 9.652114 CCCTACTAAACTAAACTAATCCTAGGA 57.348 37.037 15.46 15.46 0.00 2.94
5221 7746 7.901283 ACTAAACTAATCCTAGGAGAGAACC 57.099 40.000 23.98 0.00 0.00 3.62
5222 7747 7.420029 ACTAAACTAATCCTAGGAGAGAACCA 58.580 38.462 23.98 5.98 0.00 3.67
5223 7748 8.068733 ACTAAACTAATCCTAGGAGAGAACCAT 58.931 37.037 23.98 7.86 0.00 3.55
5224 7749 6.987403 AACTAATCCTAGGAGAGAACCATC 57.013 41.667 23.98 0.00 0.00 3.51
5225 7750 6.031964 ACTAATCCTAGGAGAGAACCATCA 57.968 41.667 23.98 0.00 0.00 3.07
5226 7751 6.074648 ACTAATCCTAGGAGAGAACCATCAG 58.925 44.000 23.98 2.51 0.00 2.90
5227 7752 4.823364 ATCCTAGGAGAGAACCATCAGA 57.177 45.455 18.34 0.00 0.00 3.27
5228 7753 4.823364 TCCTAGGAGAGAACCATCAGAT 57.177 45.455 7.62 0.00 0.00 2.90
5229 7754 4.478203 TCCTAGGAGAGAACCATCAGATG 58.522 47.826 7.62 3.04 0.00 2.90
5230 7755 3.006752 CCTAGGAGAGAACCATCAGATGC 59.993 52.174 1.05 0.00 0.00 3.91
5231 7756 1.767681 AGGAGAGAACCATCAGATGCC 59.232 52.381 4.68 0.00 0.00 4.40
5232 7757 1.487976 GGAGAGAACCATCAGATGCCA 59.512 52.381 4.68 0.00 0.00 4.92
5233 7758 2.559440 GAGAGAACCATCAGATGCCAC 58.441 52.381 4.68 0.00 0.00 5.01
5234 7759 1.211457 AGAGAACCATCAGATGCCACC 59.789 52.381 4.68 0.00 0.00 4.61
5235 7760 1.211457 GAGAACCATCAGATGCCACCT 59.789 52.381 4.68 0.00 0.00 4.00
5236 7761 1.211457 AGAACCATCAGATGCCACCTC 59.789 52.381 4.68 0.00 0.00 3.85
5237 7762 1.211457 GAACCATCAGATGCCACCTCT 59.789 52.381 4.68 0.00 0.00 3.69
5238 7763 0.835941 ACCATCAGATGCCACCTCTC 59.164 55.000 4.68 0.00 0.00 3.20
5239 7764 0.249784 CCATCAGATGCCACCTCTCG 60.250 60.000 4.68 0.00 0.00 4.04
5240 7765 0.749049 CATCAGATGCCACCTCTCGA 59.251 55.000 0.00 0.00 0.00 4.04
5241 7766 1.137675 CATCAGATGCCACCTCTCGAA 59.862 52.381 0.00 0.00 0.00 3.71
5242 7767 1.489481 TCAGATGCCACCTCTCGAAT 58.511 50.000 0.00 0.00 0.00 3.34
5243 7768 1.410517 TCAGATGCCACCTCTCGAATC 59.589 52.381 0.00 0.00 0.00 2.52
5244 7769 1.411977 CAGATGCCACCTCTCGAATCT 59.588 52.381 0.00 0.00 0.00 2.40
5245 7770 2.625314 CAGATGCCACCTCTCGAATCTA 59.375 50.000 0.00 0.00 0.00 1.98
5246 7771 3.068732 CAGATGCCACCTCTCGAATCTAA 59.931 47.826 0.00 0.00 0.00 2.10
5247 7772 3.320541 AGATGCCACCTCTCGAATCTAAG 59.679 47.826 0.00 0.00 0.00 2.18
5248 7773 2.735151 TGCCACCTCTCGAATCTAAGA 58.265 47.619 0.00 0.00 0.00 2.10
5249 7774 3.096852 TGCCACCTCTCGAATCTAAGAA 58.903 45.455 0.00 0.00 0.00 2.52
5250 7775 3.706594 TGCCACCTCTCGAATCTAAGAAT 59.293 43.478 0.00 0.00 0.00 2.40
5251 7776 4.054671 GCCACCTCTCGAATCTAAGAATG 58.945 47.826 0.00 0.00 0.00 2.67
5252 7777 4.626042 CCACCTCTCGAATCTAAGAATGG 58.374 47.826 0.00 0.00 0.00 3.16
5253 7778 4.342378 CCACCTCTCGAATCTAAGAATGGA 59.658 45.833 0.00 0.00 32.94 3.41
5254 7779 5.163405 CCACCTCTCGAATCTAAGAATGGAA 60.163 44.000 0.00 0.00 32.94 3.53
5255 7780 6.463614 CCACCTCTCGAATCTAAGAATGGAAT 60.464 42.308 0.00 0.00 32.94 3.01
5256 7781 6.423302 CACCTCTCGAATCTAAGAATGGAATG 59.577 42.308 0.00 0.00 0.00 2.67
5257 7782 5.931146 CCTCTCGAATCTAAGAATGGAATGG 59.069 44.000 0.00 0.00 0.00 3.16
5258 7783 5.300752 TCTCGAATCTAAGAATGGAATGGC 58.699 41.667 0.00 0.00 0.00 4.40
5259 7784 5.034852 TCGAATCTAAGAATGGAATGGCA 57.965 39.130 0.00 0.00 0.00 4.92
5260 7785 5.059161 TCGAATCTAAGAATGGAATGGCAG 58.941 41.667 0.00 0.00 0.00 4.85
5261 7786 4.818546 CGAATCTAAGAATGGAATGGCAGT 59.181 41.667 0.00 0.00 0.00 4.40
5262 7787 5.049818 CGAATCTAAGAATGGAATGGCAGTC 60.050 44.000 6.36 6.36 0.00 3.51
5263 7788 3.797039 TCTAAGAATGGAATGGCAGTCG 58.203 45.455 9.03 0.00 0.00 4.18
5264 7789 1.755179 AAGAATGGAATGGCAGTCGG 58.245 50.000 9.03 0.00 0.00 4.79
5265 7790 0.911769 AGAATGGAATGGCAGTCGGA 59.088 50.000 9.03 0.00 0.00 4.55
5266 7791 1.281867 AGAATGGAATGGCAGTCGGAA 59.718 47.619 9.03 0.00 0.00 4.30
5267 7792 1.672881 GAATGGAATGGCAGTCGGAAG 59.327 52.381 9.03 0.00 0.00 3.46
5268 7793 0.620556 ATGGAATGGCAGTCGGAAGT 59.379 50.000 9.03 0.00 0.00 3.01
5269 7794 1.271856 TGGAATGGCAGTCGGAAGTA 58.728 50.000 9.03 0.00 0.00 2.24
5270 7795 1.207089 TGGAATGGCAGTCGGAAGTAG 59.793 52.381 9.03 0.00 0.00 2.57
5271 7796 1.291132 GAATGGCAGTCGGAAGTAGC 58.709 55.000 0.00 0.00 0.00 3.58
5272 7797 0.905357 AATGGCAGTCGGAAGTAGCT 59.095 50.000 0.00 0.00 0.00 3.32
5273 7798 0.461961 ATGGCAGTCGGAAGTAGCTC 59.538 55.000 0.00 0.00 0.00 4.09
5274 7799 1.226717 GGCAGTCGGAAGTAGCTCG 60.227 63.158 0.00 0.00 0.00 5.03
5275 7800 1.874466 GCAGTCGGAAGTAGCTCGC 60.874 63.158 0.00 0.00 0.00 5.03
5276 7801 1.506718 CAGTCGGAAGTAGCTCGCA 59.493 57.895 0.00 0.00 0.00 5.10
5277 7802 0.109272 CAGTCGGAAGTAGCTCGCAA 60.109 55.000 0.00 0.00 0.00 4.85
5278 7803 0.109226 AGTCGGAAGTAGCTCGCAAC 60.109 55.000 0.00 0.00 0.00 4.17
5279 7804 0.388134 GTCGGAAGTAGCTCGCAACA 60.388 55.000 0.00 0.00 0.00 3.33
5280 7805 0.315886 TCGGAAGTAGCTCGCAACAA 59.684 50.000 0.00 0.00 0.00 2.83
5281 7806 0.438830 CGGAAGTAGCTCGCAACAAC 59.561 55.000 0.00 0.00 0.00 3.32
5282 7807 0.796927 GGAAGTAGCTCGCAACAACC 59.203 55.000 0.00 0.00 0.00 3.77
5283 7808 1.608283 GGAAGTAGCTCGCAACAACCT 60.608 52.381 0.00 0.00 0.00 3.50
5284 7809 1.727335 GAAGTAGCTCGCAACAACCTC 59.273 52.381 0.00 0.00 0.00 3.85
5285 7810 0.679505 AGTAGCTCGCAACAACCTCA 59.320 50.000 0.00 0.00 0.00 3.86
5286 7811 1.070134 AGTAGCTCGCAACAACCTCAA 59.930 47.619 0.00 0.00 0.00 3.02
5287 7812 1.461127 GTAGCTCGCAACAACCTCAAG 59.539 52.381 0.00 0.00 0.00 3.02
5288 7813 0.179045 AGCTCGCAACAACCTCAAGT 60.179 50.000 0.00 0.00 0.00 3.16
5289 7814 1.070134 AGCTCGCAACAACCTCAAGTA 59.930 47.619 0.00 0.00 0.00 2.24
5290 7815 1.461127 GCTCGCAACAACCTCAAGTAG 59.539 52.381 0.00 0.00 0.00 2.57
5291 7816 2.866460 GCTCGCAACAACCTCAAGTAGA 60.866 50.000 0.00 0.00 0.00 2.59
5292 7817 2.989840 CTCGCAACAACCTCAAGTAGAG 59.010 50.000 0.00 0.00 44.31 2.43
5305 7830 6.154203 CTCAAGTAGAGGCACATAAGATGA 57.846 41.667 0.00 0.00 40.84 2.92
5306 7831 6.154203 TCAAGTAGAGGCACATAAGATGAG 57.846 41.667 0.00 0.00 0.00 2.90
5307 7832 4.599047 AGTAGAGGCACATAAGATGAGC 57.401 45.455 0.82 0.82 44.57 4.26
5308 7833 2.522836 AGAGGCACATAAGATGAGCG 57.477 50.000 3.35 0.00 45.94 5.03
5309 7834 1.759445 AGAGGCACATAAGATGAGCGT 59.241 47.619 4.18 4.18 45.94 5.07
5310 7835 2.959030 AGAGGCACATAAGATGAGCGTA 59.041 45.455 4.47 0.00 45.94 4.42
5311 7836 3.053455 GAGGCACATAAGATGAGCGTAC 58.947 50.000 4.47 0.00 45.94 3.67
5312 7837 2.430694 AGGCACATAAGATGAGCGTACA 59.569 45.455 2.87 0.00 45.94 2.90
5313 7838 3.118775 AGGCACATAAGATGAGCGTACAA 60.119 43.478 2.87 0.00 45.94 2.41
5314 7839 3.809832 GGCACATAAGATGAGCGTACAAT 59.190 43.478 3.35 0.00 45.94 2.71
5315 7840 4.988540 GGCACATAAGATGAGCGTACAATA 59.011 41.667 3.35 0.00 45.94 1.90
5316 7841 5.465390 GGCACATAAGATGAGCGTACAATAA 59.535 40.000 3.35 0.00 45.94 1.40
5317 7842 6.018262 GGCACATAAGATGAGCGTACAATAAA 60.018 38.462 3.35 0.00 45.94 1.40
5318 7843 6.846283 GCACATAAGATGAGCGTACAATAAAC 59.154 38.462 0.00 0.00 37.14 2.01
5319 7844 7.465379 GCACATAAGATGAGCGTACAATAAACA 60.465 37.037 0.00 0.00 37.14 2.83
5320 7845 8.551205 CACATAAGATGAGCGTACAATAAACAT 58.449 33.333 0.00 0.00 0.00 2.71
5321 7846 8.551205 ACATAAGATGAGCGTACAATAAACATG 58.449 33.333 0.00 0.00 0.00 3.21
5322 7847 5.409643 AGATGAGCGTACAATAAACATGC 57.590 39.130 0.00 0.00 0.00 4.06
5323 7848 4.875536 AGATGAGCGTACAATAAACATGCA 59.124 37.500 0.00 0.00 0.00 3.96
5324 7849 5.528690 AGATGAGCGTACAATAAACATGCAT 59.471 36.000 0.00 0.00 0.00 3.96
5325 7850 4.907579 TGAGCGTACAATAAACATGCATG 58.092 39.130 25.09 25.09 0.00 4.06
5326 7851 3.694734 AGCGTACAATAAACATGCATGC 58.305 40.909 26.53 11.82 0.00 4.06
5327 7852 3.128415 AGCGTACAATAAACATGCATGCA 59.872 39.130 26.53 25.04 30.12 3.96
5328 7853 4.043750 GCGTACAATAAACATGCATGCAT 58.956 39.130 27.46 27.46 37.08 3.96
5329 7854 4.503734 GCGTACAATAAACATGCATGCATT 59.496 37.500 30.32 22.04 33.90 3.56
5330 7855 5.685068 GCGTACAATAAACATGCATGCATTA 59.315 36.000 30.32 23.33 33.90 1.90
5331 7856 6.198029 GCGTACAATAAACATGCATGCATTAA 59.802 34.615 30.32 15.73 33.90 1.40
5332 7857 7.096106 GCGTACAATAAACATGCATGCATTAAT 60.096 33.333 30.32 19.81 33.90 1.40
5333 7858 8.754096 CGTACAATAAACATGCATGCATTAATT 58.246 29.630 30.32 24.10 33.90 1.40
5340 7865 7.775397 AACATGCATGCATTAATTAAGGAAC 57.225 32.000 30.32 0.00 33.90 3.62
5341 7866 6.876155 ACATGCATGCATTAATTAAGGAACA 58.124 32.000 30.32 3.65 33.90 3.18
5342 7867 7.329499 ACATGCATGCATTAATTAAGGAACAA 58.671 30.769 30.32 0.00 33.90 2.83
5343 7868 7.278424 ACATGCATGCATTAATTAAGGAACAAC 59.722 33.333 30.32 0.00 33.90 3.32
5344 7869 6.105333 TGCATGCATTAATTAAGGAACAACC 58.895 36.000 18.46 0.00 39.35 3.77
5345 7870 5.523552 GCATGCATTAATTAAGGAACAACCC 59.476 40.000 14.21 0.00 40.05 4.11
5346 7871 6.638610 CATGCATTAATTAAGGAACAACCCA 58.361 36.000 13.79 0.95 40.05 4.51
5347 7872 6.672266 TGCATTAATTAAGGAACAACCCAA 57.328 33.333 13.79 0.00 40.05 4.12
5348 7873 7.067496 TGCATTAATTAAGGAACAACCCAAA 57.933 32.000 13.79 0.00 40.05 3.28
5349 7874 7.509546 TGCATTAATTAAGGAACAACCCAAAA 58.490 30.769 13.79 0.00 40.05 2.44
5350 7875 8.160106 TGCATTAATTAAGGAACAACCCAAAAT 58.840 29.630 13.79 0.00 40.05 1.82
5351 7876 8.450180 GCATTAATTAAGGAACAACCCAAAATG 58.550 33.333 13.79 0.00 40.05 2.32
5352 7877 8.945057 CATTAATTAAGGAACAACCCAAAATGG 58.055 33.333 3.79 0.00 40.05 3.16
5353 7878 6.755542 AATTAAGGAACAACCCAAAATGGA 57.244 33.333 0.00 0.00 40.96 3.41
5354 7879 5.538849 TTAAGGAACAACCCAAAATGGAC 57.461 39.130 0.00 0.00 40.96 4.02
5355 7880 3.039252 AGGAACAACCCAAAATGGACA 57.961 42.857 0.00 0.00 40.96 4.02
5356 7881 2.965147 AGGAACAACCCAAAATGGACAG 59.035 45.455 0.00 0.00 40.96 3.51
5357 7882 2.962421 GGAACAACCCAAAATGGACAGA 59.038 45.455 0.00 0.00 40.96 3.41
5358 7883 3.386402 GGAACAACCCAAAATGGACAGAA 59.614 43.478 0.00 0.00 40.96 3.02
5359 7884 4.501400 GGAACAACCCAAAATGGACAGAAG 60.501 45.833 0.00 0.00 40.96 2.85
5360 7885 2.365293 ACAACCCAAAATGGACAGAAGC 59.635 45.455 0.00 0.00 40.96 3.86
5361 7886 2.364970 CAACCCAAAATGGACAGAAGCA 59.635 45.455 0.00 0.00 40.96 3.91
5362 7887 1.963515 ACCCAAAATGGACAGAAGCAC 59.036 47.619 0.00 0.00 40.96 4.40
5363 7888 1.962807 CCCAAAATGGACAGAAGCACA 59.037 47.619 0.00 0.00 40.96 4.57
5364 7889 2.029649 CCCAAAATGGACAGAAGCACAG 60.030 50.000 0.00 0.00 40.96 3.66
5365 7890 2.608752 CCAAAATGGACAGAAGCACAGC 60.609 50.000 0.00 0.00 40.96 4.40
5366 7891 1.985473 AAATGGACAGAAGCACAGCA 58.015 45.000 0.00 0.00 0.00 4.41
5367 7892 2.211250 AATGGACAGAAGCACAGCAT 57.789 45.000 0.00 0.00 0.00 3.79
5368 7893 3.354948 AATGGACAGAAGCACAGCATA 57.645 42.857 0.00 0.00 0.00 3.14
5369 7894 2.099141 TGGACAGAAGCACAGCATAC 57.901 50.000 0.00 0.00 0.00 2.39
5370 7895 1.347378 TGGACAGAAGCACAGCATACA 59.653 47.619 0.00 0.00 0.00 2.29
5371 7896 2.224499 TGGACAGAAGCACAGCATACAA 60.224 45.455 0.00 0.00 0.00 2.41
5372 7897 2.813754 GGACAGAAGCACAGCATACAAA 59.186 45.455 0.00 0.00 0.00 2.83
5373 7898 3.253188 GGACAGAAGCACAGCATACAAAA 59.747 43.478 0.00 0.00 0.00 2.44
5374 7899 4.261572 GGACAGAAGCACAGCATACAAAAA 60.262 41.667 0.00 0.00 0.00 1.94
5375 7900 4.610945 ACAGAAGCACAGCATACAAAAAC 58.389 39.130 0.00 0.00 0.00 2.43
5376 7901 4.097741 ACAGAAGCACAGCATACAAAAACA 59.902 37.500 0.00 0.00 0.00 2.83
5377 7902 4.442073 CAGAAGCACAGCATACAAAAACAC 59.558 41.667 0.00 0.00 0.00 3.32
5378 7903 4.097741 AGAAGCACAGCATACAAAAACACA 59.902 37.500 0.00 0.00 0.00 3.72
5379 7904 4.589216 AGCACAGCATACAAAAACACAT 57.411 36.364 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.398390 GGGTCTCATGCAAAAGCGTAG 59.602 52.381 0.00 0.00 0.00 3.51
11 12 1.448985 GGGTCTCATGCAAAAGCGTA 58.551 50.000 0.00 0.00 0.00 4.42
12 13 1.244019 GGGGTCTCATGCAAAAGCGT 61.244 55.000 0.00 0.00 0.00 5.07
13 14 1.243342 TGGGGTCTCATGCAAAAGCG 61.243 55.000 0.00 0.00 0.00 4.68
14 15 0.244721 GTGGGGTCTCATGCAAAAGC 59.755 55.000 0.00 0.00 0.00 3.51
15 16 1.815003 GAGTGGGGTCTCATGCAAAAG 59.185 52.381 0.00 0.00 34.88 2.27
16 17 1.547675 GGAGTGGGGTCTCATGCAAAA 60.548 52.381 0.00 0.00 36.30 2.44
17 18 0.038166 GGAGTGGGGTCTCATGCAAA 59.962 55.000 0.00 0.00 36.30 3.68
28 29 3.785364 TGAAAAATTAAGGGGAGTGGGG 58.215 45.455 0.00 0.00 0.00 4.96
30 31 5.716703 AGACATGAAAAATTAAGGGGAGTGG 59.283 40.000 0.00 0.00 0.00 4.00
60 61 4.164843 TGGGAATTTAGCCTATGTGGAC 57.835 45.455 0.00 0.00 38.35 4.02
103 104 7.108841 AGTCGGATAAGAGCAAGTACAATAA 57.891 36.000 0.00 0.00 0.00 1.40
108 109 9.525409 TTTAATAAGTCGGATAAGAGCAAGTAC 57.475 33.333 0.00 0.00 0.00 2.73
185 186 3.130633 GCTTGTTTCCAATGGTTTCCAC 58.869 45.455 0.00 0.00 35.80 4.02
192 193 3.457610 AGTTGTGCTTGTTTCCAATGG 57.542 42.857 0.00 0.00 0.00 3.16
203 204 9.740239 CTCATGCATTAATAATAAGTTGTGCTT 57.260 29.630 0.00 0.00 41.05 3.91
205 206 9.734620 TTCTCATGCATTAATAATAAGTTGTGC 57.265 29.630 0.00 0.00 0.00 4.57
284 289 8.565416 TGCATTGATGAATCTGATCAATTAGAC 58.435 33.333 6.18 0.23 44.55 2.59
285 290 8.685838 TGCATTGATGAATCTGATCAATTAGA 57.314 30.769 6.18 0.00 44.55 2.10
300 305 6.413783 AATTATGAATGCCTGCATTGATGA 57.586 33.333 21.14 15.20 45.50 2.92
310 315 9.189156 ACATGTGTAGTTAAATTATGAATGCCT 57.811 29.630 0.00 0.00 0.00 4.75
325 333 4.864806 CAGCTCGTAATCACATGTGTAGTT 59.135 41.667 24.63 18.76 0.00 2.24
358 366 5.755861 GCTAGATAACCAAAGTCCTAGCAAG 59.244 44.000 12.61 0.00 41.32 4.01
469 477 0.537188 ACCTCCTTATGGACACTGCG 59.463 55.000 0.00 0.00 37.46 5.18
493 501 8.984764 CATGATCAGCATATAAAAACCAATTGG 58.015 33.333 23.31 23.31 36.96 3.16
496 504 7.654520 GCACATGATCAGCATATAAAAACCAAT 59.345 33.333 0.00 0.00 34.82 3.16
497 505 6.979817 GCACATGATCAGCATATAAAAACCAA 59.020 34.615 0.00 0.00 34.82 3.67
498 506 6.321945 AGCACATGATCAGCATATAAAAACCA 59.678 34.615 0.00 0.00 34.82 3.67
499 507 6.639686 CAGCACATGATCAGCATATAAAAACC 59.360 38.462 0.00 0.00 34.82 3.27
500 508 6.143438 GCAGCACATGATCAGCATATAAAAAC 59.857 38.462 0.00 0.00 34.82 2.43
501 509 6.040054 AGCAGCACATGATCAGCATATAAAAA 59.960 34.615 0.00 0.00 34.82 1.94
502 510 5.533528 AGCAGCACATGATCAGCATATAAAA 59.466 36.000 0.00 0.00 34.82 1.52
503 511 5.067954 AGCAGCACATGATCAGCATATAAA 58.932 37.500 0.00 0.00 34.82 1.40
504 512 4.648651 AGCAGCACATGATCAGCATATAA 58.351 39.130 0.00 0.00 34.82 0.98
506 514 3.141767 AGCAGCACATGATCAGCATAT 57.858 42.857 0.00 0.00 34.82 1.78
507 515 2.616842 CAAGCAGCACATGATCAGCATA 59.383 45.455 0.00 0.00 34.82 3.14
509 517 0.808755 CAAGCAGCACATGATCAGCA 59.191 50.000 0.00 0.00 0.00 4.41
510 518 0.100682 CCAAGCAGCACATGATCAGC 59.899 55.000 0.00 0.00 0.00 4.26
511 519 0.100682 GCCAAGCAGCACATGATCAG 59.899 55.000 0.00 0.00 0.00 2.90
512 520 0.609681 TGCCAAGCAGCACATGATCA 60.610 50.000 0.00 0.00 38.00 2.92
513 521 0.528924 TTGCCAAGCAGCACATGATC 59.471 50.000 0.00 0.00 43.97 2.92
514 522 0.530744 CTTGCCAAGCAGCACATGAT 59.469 50.000 0.00 0.00 43.97 2.45
515 523 0.824595 ACTTGCCAAGCAGCACATGA 60.825 50.000 3.88 0.00 43.97 3.07
516 524 0.032952 AACTTGCCAAGCAGCACATG 59.967 50.000 3.88 0.00 43.97 3.21
517 525 0.032952 CAACTTGCCAAGCAGCACAT 59.967 50.000 3.88 0.00 43.97 3.21
518 526 1.438399 CAACTTGCCAAGCAGCACA 59.562 52.632 3.88 0.00 43.97 4.57
519 527 1.952635 GCAACTTGCCAAGCAGCAC 60.953 57.895 14.55 0.00 43.97 4.40
520 528 2.418356 GCAACTTGCCAAGCAGCA 59.582 55.556 14.55 0.00 40.61 4.41
533 541 1.598701 GCAGATGGGGTTGAGGCAAC 61.599 60.000 1.82 1.82 42.89 4.17
534 542 1.304381 GCAGATGGGGTTGAGGCAA 60.304 57.895 0.00 0.00 0.00 4.52
535 543 2.233566 AGCAGATGGGGTTGAGGCA 61.234 57.895 0.00 0.00 0.00 4.75
536 544 1.751927 CAGCAGATGGGGTTGAGGC 60.752 63.158 0.00 0.00 0.00 4.70
537 545 1.751927 GCAGCAGATGGGGTTGAGG 60.752 63.158 0.00 0.00 0.00 3.86
538 546 0.609957 TTGCAGCAGATGGGGTTGAG 60.610 55.000 0.00 0.00 0.00 3.02
539 547 0.040058 ATTGCAGCAGATGGGGTTGA 59.960 50.000 0.00 0.00 0.00 3.18
540 548 0.174845 CATTGCAGCAGATGGGGTTG 59.825 55.000 0.00 0.00 0.00 3.77
541 549 0.040058 TCATTGCAGCAGATGGGGTT 59.960 50.000 14.05 0.00 0.00 4.11
542 550 0.260816 ATCATTGCAGCAGATGGGGT 59.739 50.000 14.05 3.26 0.00 4.95
543 551 2.281539 TATCATTGCAGCAGATGGGG 57.718 50.000 14.05 0.00 0.00 4.96
544 552 3.440522 CAGATATCATTGCAGCAGATGGG 59.559 47.826 5.32 0.00 0.00 4.00
545 553 4.072839 ACAGATATCATTGCAGCAGATGG 58.927 43.478 5.32 0.00 0.00 3.51
546 554 4.515567 ACACAGATATCATTGCAGCAGATG 59.484 41.667 5.32 8.72 0.00 2.90
547 555 4.515567 CACACAGATATCATTGCAGCAGAT 59.484 41.667 5.32 0.00 0.00 2.90
548 556 3.875134 CACACAGATATCATTGCAGCAGA 59.125 43.478 5.32 0.00 0.00 4.26
549 557 3.626217 ACACACAGATATCATTGCAGCAG 59.374 43.478 5.32 0.00 0.00 4.24
550 558 3.613030 ACACACAGATATCATTGCAGCA 58.387 40.909 5.32 0.00 0.00 4.41
551 559 5.739752 TTACACACAGATATCATTGCAGC 57.260 39.130 5.32 0.00 0.00 5.25
552 560 6.183360 TGCTTTACACACAGATATCATTGCAG 60.183 38.462 5.32 1.14 0.00 4.41
553 561 5.647225 TGCTTTACACACAGATATCATTGCA 59.353 36.000 5.32 0.00 0.00 4.08
554 562 6.122850 TGCTTTACACACAGATATCATTGC 57.877 37.500 5.32 0.00 0.00 3.56
555 563 7.700505 ACATGCTTTACACACAGATATCATTG 58.299 34.615 5.32 3.85 0.00 2.82
556 564 7.012704 GGACATGCTTTACACACAGATATCATT 59.987 37.037 5.32 0.00 0.00 2.57
557 565 6.484643 GGACATGCTTTACACACAGATATCAT 59.515 38.462 5.32 0.00 0.00 2.45
558 566 5.817296 GGACATGCTTTACACACAGATATCA 59.183 40.000 5.32 0.00 0.00 2.15
559 567 5.237344 GGGACATGCTTTACACACAGATATC 59.763 44.000 0.00 0.00 0.00 1.63
560 568 5.126067 GGGACATGCTTTACACACAGATAT 58.874 41.667 0.00 0.00 0.00 1.63
561 569 4.019771 TGGGACATGCTTTACACACAGATA 60.020 41.667 0.00 0.00 0.00 1.98
562 570 3.244875 TGGGACATGCTTTACACACAGAT 60.245 43.478 0.00 0.00 0.00 2.90
563 571 2.105649 TGGGACATGCTTTACACACAGA 59.894 45.455 0.00 0.00 0.00 3.41
564 572 2.503331 TGGGACATGCTTTACACACAG 58.497 47.619 0.00 0.00 0.00 3.66
565 573 2.647683 TGGGACATGCTTTACACACA 57.352 45.000 0.00 0.00 0.00 3.72
579 587 7.957002 TCTAAGATGTAGATTCAAGATGGGAC 58.043 38.462 0.00 0.00 0.00 4.46
580 588 7.256119 GCTCTAAGATGTAGATTCAAGATGGGA 60.256 40.741 0.00 0.00 0.00 4.37
581 589 6.873076 GCTCTAAGATGTAGATTCAAGATGGG 59.127 42.308 0.00 0.00 0.00 4.00
582 590 7.440198 TGCTCTAAGATGTAGATTCAAGATGG 58.560 38.462 0.00 0.00 0.00 3.51
583 591 8.763356 GTTGCTCTAAGATGTAGATTCAAGATG 58.237 37.037 0.00 0.00 0.00 2.90
584 592 8.703743 AGTTGCTCTAAGATGTAGATTCAAGAT 58.296 33.333 0.00 0.00 0.00 2.40
585 593 8.072321 AGTTGCTCTAAGATGTAGATTCAAGA 57.928 34.615 0.00 0.00 0.00 3.02
586 594 8.196771 AGAGTTGCTCTAAGATGTAGATTCAAG 58.803 37.037 0.00 0.00 39.28 3.02
587 595 7.978414 CAGAGTTGCTCTAAGATGTAGATTCAA 59.022 37.037 0.00 0.00 38.99 2.69
588 596 7.417229 CCAGAGTTGCTCTAAGATGTAGATTCA 60.417 40.741 0.00 0.00 38.99 2.57
589 597 6.922957 CCAGAGTTGCTCTAAGATGTAGATTC 59.077 42.308 0.00 0.00 38.99 2.52
590 598 6.685116 GCCAGAGTTGCTCTAAGATGTAGATT 60.685 42.308 0.00 0.00 38.99 2.40
591 599 5.221422 GCCAGAGTTGCTCTAAGATGTAGAT 60.221 44.000 0.00 0.00 38.99 1.98
592 600 4.098654 GCCAGAGTTGCTCTAAGATGTAGA 59.901 45.833 0.00 0.00 38.99 2.59
593 601 4.142071 TGCCAGAGTTGCTCTAAGATGTAG 60.142 45.833 0.00 0.00 38.99 2.74
594 602 3.769300 TGCCAGAGTTGCTCTAAGATGTA 59.231 43.478 0.00 0.00 38.99 2.29
595 603 2.568956 TGCCAGAGTTGCTCTAAGATGT 59.431 45.455 0.00 0.00 38.99 3.06
596 604 3.118847 TCTGCCAGAGTTGCTCTAAGATG 60.119 47.826 0.00 0.00 38.99 2.90
597 605 3.102972 TCTGCCAGAGTTGCTCTAAGAT 58.897 45.455 0.00 0.00 38.99 2.40
598 606 2.529632 TCTGCCAGAGTTGCTCTAAGA 58.470 47.619 0.00 0.95 38.99 2.10
599 607 3.456280 GATCTGCCAGAGTTGCTCTAAG 58.544 50.000 0.00 0.00 38.99 2.18
600 608 2.169352 GGATCTGCCAGAGTTGCTCTAA 59.831 50.000 0.00 0.00 38.99 2.10
601 609 1.759445 GGATCTGCCAGAGTTGCTCTA 59.241 52.381 0.00 0.00 38.99 2.43
602 610 0.540923 GGATCTGCCAGAGTTGCTCT 59.459 55.000 0.00 0.00 42.11 4.09
603 611 0.540923 AGGATCTGCCAGAGTTGCTC 59.459 55.000 0.00 0.00 40.02 4.26
604 612 0.990374 AAGGATCTGCCAGAGTTGCT 59.010 50.000 0.00 0.00 40.02 3.91
605 613 1.377536 GAAGGATCTGCCAGAGTTGC 58.622 55.000 0.00 0.00 40.02 4.17
606 614 1.407989 GGGAAGGATCTGCCAGAGTTG 60.408 57.143 0.00 0.00 40.02 3.16
637 645 3.192633 ACCTATTCACAATGGCGGTTTTC 59.807 43.478 0.00 0.00 0.00 2.29
648 657 7.398829 TCAAATTACCTAGCACCTATTCACAA 58.601 34.615 0.00 0.00 0.00 3.33
833 858 4.833938 TGCATGCCCATGTGATTTGTATAT 59.166 37.500 16.68 0.00 40.80 0.86
838 863 2.276201 CTTGCATGCCCATGTGATTTG 58.724 47.619 16.68 0.00 40.80 2.32
839 864 1.406341 GCTTGCATGCCCATGTGATTT 60.406 47.619 16.68 0.00 40.80 2.17
895 1030 4.162320 TCTGGAGGCTAAGTTCATCGATTT 59.838 41.667 0.00 0.00 0.00 2.17
918 1054 9.743057 CTTCAAGAGATACGTTTAGATTGAGAT 57.257 33.333 0.00 0.00 0.00 2.75
1000 1802 0.032678 CTAGCTAGGATGGTGGCACG 59.967 60.000 13.32 0.00 0.00 5.34
1150 1965 2.033448 GTGGATGTTGTCGGCCCA 59.967 61.111 0.00 0.00 0.00 5.36
1217 2032 9.280174 TGTAAACTAAAAAGATCAAGAACGGAT 57.720 29.630 0.00 0.00 0.00 4.18
1271 2120 1.662122 CACTCCAAACGGTATAACGCC 59.338 52.381 10.79 0.00 37.37 5.68
1272 2121 1.662122 CCACTCCAAACGGTATAACGC 59.338 52.381 10.79 0.00 37.37 4.84
1273 2122 1.662122 GCCACTCCAAACGGTATAACG 59.338 52.381 9.04 9.04 40.31 3.18
1274 2123 2.702261 TGCCACTCCAAACGGTATAAC 58.298 47.619 0.00 0.00 0.00 1.89
1275 2124 3.637911 ATGCCACTCCAAACGGTATAA 57.362 42.857 0.00 0.00 0.00 0.98
1276 2125 3.275143 CAATGCCACTCCAAACGGTATA 58.725 45.455 0.00 0.00 0.00 1.47
1277 2126 2.091541 CAATGCCACTCCAAACGGTAT 58.908 47.619 0.00 0.00 0.00 2.73
1278 2127 1.202830 ACAATGCCACTCCAAACGGTA 60.203 47.619 0.00 0.00 0.00 4.02
1354 2340 5.873179 TGGTAAATAGCGACAAAAAGAGG 57.127 39.130 0.00 0.00 0.00 3.69
1358 2344 5.883673 AGGCTATGGTAAATAGCGACAAAAA 59.116 36.000 10.37 0.00 45.83 1.94
1374 3474 6.396829 AAAGCTTTAAATAGCAGGCTATGG 57.603 37.500 10.72 4.87 43.68 2.74
1393 3493 4.746115 TCATCATGAAGTGCAAACAAAAGC 59.254 37.500 0.00 0.00 0.00 3.51
1455 3556 6.825213 AGACATACACATTGCACAATCTACAT 59.175 34.615 0.00 0.00 0.00 2.29
1456 3557 6.172630 AGACATACACATTGCACAATCTACA 58.827 36.000 0.00 0.00 0.00 2.74
1457 3558 6.668541 AGACATACACATTGCACAATCTAC 57.331 37.500 0.00 0.00 0.00 2.59
1493 3594 5.298276 GGTTTGGTGTGATTTTGTAGACTGA 59.702 40.000 0.00 0.00 0.00 3.41
1494 3595 5.519722 GGTTTGGTGTGATTTTGTAGACTG 58.480 41.667 0.00 0.00 0.00 3.51
1495 3596 4.274950 CGGTTTGGTGTGATTTTGTAGACT 59.725 41.667 0.00 0.00 0.00 3.24
1496 3597 4.035909 ACGGTTTGGTGTGATTTTGTAGAC 59.964 41.667 0.00 0.00 0.00 2.59
1498 3599 4.561735 ACGGTTTGGTGTGATTTTGTAG 57.438 40.909 0.00 0.00 0.00 2.74
1499 3600 4.985538 AACGGTTTGGTGTGATTTTGTA 57.014 36.364 0.00 0.00 0.00 2.41
1500 3601 3.878160 AACGGTTTGGTGTGATTTTGT 57.122 38.095 0.00 0.00 0.00 2.83
1501 3602 4.208253 GCTAAACGGTTTGGTGTGATTTTG 59.792 41.667 16.05 0.00 0.00 2.44
1536 3688 2.794350 ACAAACAGCGCAAAAATAGTGC 59.206 40.909 11.47 0.00 42.55 4.40
1538 3690 6.145371 CCAATAACAAACAGCGCAAAAATAGT 59.855 34.615 11.47 0.00 0.00 2.12
1540 3692 5.406780 CCCAATAACAAACAGCGCAAAAATA 59.593 36.000 11.47 0.00 0.00 1.40
1541 3693 4.213059 CCCAATAACAAACAGCGCAAAAAT 59.787 37.500 11.47 0.00 0.00 1.82
1546 3698 1.000827 CACCCAATAACAAACAGCGCA 60.001 47.619 11.47 0.00 0.00 6.09
1547 3699 1.000717 ACACCCAATAACAAACAGCGC 60.001 47.619 0.00 0.00 0.00 5.92
1552 3704 6.879458 AGATCTAGTCACACCCAATAACAAAC 59.121 38.462 0.00 0.00 0.00 2.93
1555 3707 5.719563 TGAGATCTAGTCACACCCAATAACA 59.280 40.000 0.00 0.00 0.00 2.41
1556 3708 6.127310 ACTGAGATCTAGTCACACCCAATAAC 60.127 42.308 0.00 0.00 0.00 1.89
1558 3710 5.519808 ACTGAGATCTAGTCACACCCAATA 58.480 41.667 0.00 0.00 0.00 1.90
1559 3711 4.357325 ACTGAGATCTAGTCACACCCAAT 58.643 43.478 0.00 0.00 0.00 3.16
1583 3883 8.097038 TGACAATAGTCTTGCTAAATCTCAGTT 58.903 33.333 0.00 0.00 45.20 3.16
1662 3963 6.759356 CACAATCTATGTACGGGAATTACACA 59.241 38.462 0.00 0.00 41.46 3.72
1663 3964 6.292703 GCACAATCTATGTACGGGAATTACAC 60.293 42.308 0.00 0.00 41.46 2.90
1774 4075 2.357760 ACGGCAATGGTACGCGTT 60.358 55.556 20.78 0.80 0.00 4.84
1812 4113 1.079127 CGGAGTGGCTCGTTCCATT 60.079 57.895 2.07 0.00 38.57 3.16
2101 4417 0.840722 GGGAGAAGAAGGTGTGGGGA 60.841 60.000 0.00 0.00 0.00 4.81
2168 4484 1.614241 ATCTTGGGGTCGAACTCCGG 61.614 60.000 0.00 0.00 43.44 5.14
2224 4540 3.490249 CGTCGTATATGTCTTCCCAGCAA 60.490 47.826 0.00 0.00 0.00 3.91
2332 4648 3.665675 CTCGCCGAGGGTTTCCTGG 62.666 68.421 6.13 0.00 45.05 4.45
2494 4825 4.767255 GGGCAGAGGACGCACTGG 62.767 72.222 0.00 0.00 35.05 4.00
2578 4912 1.347707 GTGATGGTCTTCTGGTGGTGA 59.652 52.381 0.00 0.00 0.00 4.02
2678 5021 0.108377 TCGTAGCGTCCATTGCACAT 60.108 50.000 0.00 0.00 33.85 3.21
2794 5137 3.636231 CTCGGCCCACCCTTGTCA 61.636 66.667 0.00 0.00 0.00 3.58
2869 5212 2.171940 CGCTGCTCGAAGTTGTGC 59.828 61.111 0.00 0.00 41.67 4.57
2892 5235 1.733402 CTTGCCACCGCCTTGTTTCA 61.733 55.000 0.00 0.00 0.00 2.69
2989 5341 4.662961 TGCACACTCCACGCCTCG 62.663 66.667 0.00 0.00 0.00 4.63
3073 5425 2.922503 TCCTGAACGAGGCCAGCA 60.923 61.111 5.01 0.00 42.47 4.41
3076 5428 1.371183 CTTGTCCTGAACGAGGCCA 59.629 57.895 5.01 0.00 42.47 5.36
3085 5437 1.367471 CACTCGGTGCTTGTCCTGA 59.633 57.895 0.00 0.00 0.00 3.86
3619 5977 6.153000 CAGATACTATTAATGGAGTACCGGCT 59.847 42.308 0.00 0.00 39.42 5.52
3620 5978 6.152323 TCAGATACTATTAATGGAGTACCGGC 59.848 42.308 0.00 0.00 39.42 6.13
3621 5979 7.698506 TCAGATACTATTAATGGAGTACCGG 57.301 40.000 5.74 0.00 39.42 5.28
3622 5980 8.740906 ACATCAGATACTATTAATGGAGTACCG 58.259 37.037 5.74 0.00 39.42 4.02
3636 6017 6.737720 ATGGAAGCAGAACATCAGATACTA 57.262 37.500 0.00 0.00 0.00 1.82
3637 6018 5.627182 ATGGAAGCAGAACATCAGATACT 57.373 39.130 0.00 0.00 0.00 2.12
3638 6019 5.505324 GCAATGGAAGCAGAACATCAGATAC 60.505 44.000 0.00 0.00 0.00 2.24
3639 6020 4.577693 GCAATGGAAGCAGAACATCAGATA 59.422 41.667 0.00 0.00 0.00 1.98
3640 6021 3.380637 GCAATGGAAGCAGAACATCAGAT 59.619 43.478 0.00 0.00 0.00 2.90
3641 6022 2.751259 GCAATGGAAGCAGAACATCAGA 59.249 45.455 0.00 0.00 0.00 3.27
3642 6023 2.490509 TGCAATGGAAGCAGAACATCAG 59.509 45.455 0.00 0.00 37.02 2.90
3643 6024 2.516906 TGCAATGGAAGCAGAACATCA 58.483 42.857 0.00 0.00 37.02 3.07
3644 6025 3.795623 ATGCAATGGAAGCAGAACATC 57.204 42.857 0.00 0.00 46.36 3.06
3645 6026 3.857052 CAATGCAATGGAAGCAGAACAT 58.143 40.909 0.00 0.00 46.36 2.71
3646 6027 2.610976 GCAATGCAATGGAAGCAGAACA 60.611 45.455 3.49 0.00 46.36 3.18
3647 6028 1.997606 GCAATGCAATGGAAGCAGAAC 59.002 47.619 3.49 0.00 46.36 3.01
3648 6029 1.897133 AGCAATGCAATGGAAGCAGAA 59.103 42.857 8.35 0.00 46.36 3.02
3723 6122 5.368145 GCAGATCCCACAATAATGTACTCA 58.632 41.667 0.00 0.00 37.82 3.41
3732 6131 1.922447 AGGTTGGCAGATCCCACAATA 59.078 47.619 0.00 0.00 33.82 1.90
3804 6203 4.373116 ACACGGTGCGGCTGGTAG 62.373 66.667 8.30 0.00 0.00 3.18
3896 6295 2.804090 GGAAGTCGTCGTGCGTCC 60.804 66.667 8.15 8.15 42.13 4.79
4014 6413 3.390521 TAGGTGAGCAGGTGGCCG 61.391 66.667 0.00 0.00 46.50 6.13
4065 6464 4.394729 AGAATTCAAAACCCTTGAGCGTA 58.605 39.130 8.44 0.00 0.00 4.42
4160 6559 4.261801 GACTAGGAGCAGCAAATTAACCA 58.738 43.478 0.00 0.00 0.00 3.67
4166 6573 2.103941 GCTAGGACTAGGAGCAGCAAAT 59.896 50.000 8.33 0.00 36.20 2.32
4167 6574 1.482593 GCTAGGACTAGGAGCAGCAAA 59.517 52.381 8.33 0.00 36.20 3.68
4169 6576 0.757188 GGCTAGGACTAGGAGCAGCA 60.757 60.000 8.33 0.00 37.98 4.41
4170 6577 0.757188 TGGCTAGGACTAGGAGCAGC 60.757 60.000 8.33 5.62 37.98 5.25
4171 6578 1.327303 CTGGCTAGGACTAGGAGCAG 58.673 60.000 8.33 0.00 37.98 4.24
4172 6579 0.631753 ACTGGCTAGGACTAGGAGCA 59.368 55.000 0.85 0.00 37.98 4.26
4173 6580 1.036707 CACTGGCTAGGACTAGGAGC 58.963 60.000 0.85 0.00 33.87 4.70
4174 6581 2.428890 CAACACTGGCTAGGACTAGGAG 59.571 54.545 0.85 0.00 33.87 3.69
4175 6582 2.042569 TCAACACTGGCTAGGACTAGGA 59.957 50.000 0.85 0.00 33.87 2.94
4176 6583 2.457598 TCAACACTGGCTAGGACTAGG 58.542 52.381 0.85 0.00 33.87 3.02
4177 6584 4.744795 AATCAACACTGGCTAGGACTAG 57.255 45.455 0.85 1.98 36.29 2.57
4178 6585 6.582636 CATTAATCAACACTGGCTAGGACTA 58.417 40.000 0.85 0.00 0.00 2.59
4179 6586 5.431765 CATTAATCAACACTGGCTAGGACT 58.568 41.667 0.85 0.00 0.00 3.85
4180 6587 4.035675 GCATTAATCAACACTGGCTAGGAC 59.964 45.833 0.85 0.00 0.00 3.85
4188 6601 3.504863 GTGCCAGCATTAATCAACACTG 58.495 45.455 0.00 0.00 0.00 3.66
4202 6622 2.433318 GACAGTCGAGGTGCCAGC 60.433 66.667 0.00 0.00 0.00 4.85
4213 6633 6.376018 ACTGAATCCTGACTACTAAGACAGTC 59.624 42.308 0.00 0.00 41.96 3.51
4214 6634 6.151985 CACTGAATCCTGACTACTAAGACAGT 59.848 42.308 0.00 0.00 41.96 3.55
4225 6648 6.537355 TCAAGAAAATCACTGAATCCTGACT 58.463 36.000 0.00 0.00 0.00 3.41
4226 6649 6.808008 TCAAGAAAATCACTGAATCCTGAC 57.192 37.500 0.00 0.00 0.00 3.51
4227 6650 7.822161 TTTCAAGAAAATCACTGAATCCTGA 57.178 32.000 0.00 0.00 0.00 3.86
4303 6738 1.035923 TGCTCATGTCCGATCTCTCC 58.964 55.000 0.00 0.00 0.00 3.71
4307 6742 1.323271 ACCGTGCTCATGTCCGATCT 61.323 55.000 0.00 0.00 0.00 2.75
4310 6745 2.571757 GACCGTGCTCATGTCCGA 59.428 61.111 0.00 0.00 0.00 4.55
4312 6747 0.949105 AAACGACCGTGCTCATGTCC 60.949 55.000 0.00 0.00 0.00 4.02
4314 6749 0.865769 GAAAACGACCGTGCTCATGT 59.134 50.000 0.00 0.00 0.00 3.21
4315 6750 1.126846 GAGAAAACGACCGTGCTCATG 59.873 52.381 12.29 0.00 0.00 3.07
4318 6803 1.499049 AAGAGAAAACGACCGTGCTC 58.501 50.000 0.00 4.34 0.00 4.26
4325 6810 9.118236 CCTTCATTTATTCAAAGAGAAAACGAC 57.882 33.333 0.00 0.00 40.22 4.34
4362 6847 5.342433 GCTGCATAAATGTCTGCAATGTTA 58.658 37.500 0.00 0.00 46.87 2.41
4366 6851 2.424601 ACGCTGCATAAATGTCTGCAAT 59.575 40.909 0.00 0.00 46.87 3.56
4387 6872 5.867716 GCGAGGAGTCAAGATAGTGTTTTTA 59.132 40.000 0.00 0.00 0.00 1.52
4397 6882 2.290122 CTGCGGCGAGGAGTCAAGAT 62.290 60.000 12.98 0.00 33.20 2.40
4404 6889 0.596083 CTATGAACTGCGGCGAGGAG 60.596 60.000 12.98 5.14 44.60 3.69
4540 7043 4.220382 CCACAGAATGGGCTACAATGAAAA 59.780 41.667 0.00 0.00 45.95 2.29
4565 7068 8.547967 TGAGACCTTTGTTGACATATAGTTTC 57.452 34.615 0.00 0.00 0.00 2.78
4566 7069 8.918202 TTGAGACCTTTGTTGACATATAGTTT 57.082 30.769 0.00 0.00 0.00 2.66
4569 7072 7.467623 GCTTTGAGACCTTTGTTGACATATAG 58.532 38.462 0.00 0.00 0.00 1.31
4583 7086 1.267121 TTCCTAGCGCTTTGAGACCT 58.733 50.000 18.68 0.00 0.00 3.85
4600 7103 3.243535 CCTTGCTCACCAGAAAAGGTTTC 60.244 47.826 0.00 0.00 40.77 2.78
4613 7116 2.079020 TTGCTTGCTGCCTTGCTCAC 62.079 55.000 0.00 0.00 42.00 3.51
4635 7138 7.989416 TTTCTTATAAACCGGTCAATTCTGT 57.011 32.000 8.04 0.00 0.00 3.41
4646 7149 6.746745 TGGCCTAGTTTTTCTTATAAACCG 57.253 37.500 3.32 0.00 36.40 4.44
4672 7175 8.132362 TGACAGCGTTTATTTTTCATGTTAGTT 58.868 29.630 0.00 0.00 0.00 2.24
4675 7178 8.858003 TTTGACAGCGTTTATTTTTCATGTTA 57.142 26.923 0.00 0.00 0.00 2.41
4686 7189 6.349033 GGTGGTCTATTTTTGACAGCGTTTAT 60.349 38.462 0.00 0.00 36.26 1.40
4687 7190 5.049267 GGTGGTCTATTTTTGACAGCGTTTA 60.049 40.000 0.00 0.00 36.26 2.01
4714 7221 4.767409 TCTGGGTCGATGTCATATTAGGAG 59.233 45.833 0.00 0.00 0.00 3.69
4721 7228 1.683385 CTGCTCTGGGTCGATGTCATA 59.317 52.381 0.00 0.00 0.00 2.15
4730 7237 1.270839 TGCTTACAACTGCTCTGGGTC 60.271 52.381 0.00 0.00 0.00 4.46
4735 7242 4.550076 AGATCTTGCTTACAACTGCTCT 57.450 40.909 0.00 0.00 0.00 4.09
4736 7243 4.692625 TGAAGATCTTGCTTACAACTGCTC 59.307 41.667 14.00 0.00 0.00 4.26
4737 7244 4.645535 TGAAGATCTTGCTTACAACTGCT 58.354 39.130 14.00 0.00 0.00 4.24
4741 7248 6.853362 GTGTCTTTGAAGATCTTGCTTACAAC 59.147 38.462 14.00 3.24 37.39 3.32
4784 7291 2.092592 ACATCGGTATCCTTGGAAACCC 60.093 50.000 0.00 0.00 0.00 4.11
4788 7295 2.169769 GGTGACATCGGTATCCTTGGAA 59.830 50.000 0.00 0.00 0.00 3.53
4803 7310 2.033448 GGGTGAATGCCGGTGACA 59.967 61.111 1.90 0.00 0.00 3.58
4817 7324 0.106149 GCTTATTGATCGACGGGGGT 59.894 55.000 0.00 0.00 0.00 4.95
4839 7346 0.896479 TCGCGCATGGGTATAGGCTA 60.896 55.000 8.75 0.00 0.00 3.93
4877 7384 3.322541 TGTTGTCTAGACCGGACATTTCA 59.677 43.478 20.11 0.00 42.26 2.69
4887 7394 3.400255 GTTGGAGGTTGTTGTCTAGACC 58.600 50.000 20.11 6.32 0.00 3.85
4933 7440 8.704234 CATTGTCGAAGAGTATTTCTATTAGGC 58.296 37.037 0.00 0.00 36.95 3.93
4938 7445 6.821388 AGGCATTGTCGAAGAGTATTTCTAT 58.179 36.000 0.00 0.00 36.95 1.98
4944 7451 2.766263 TGGAGGCATTGTCGAAGAGTAT 59.234 45.455 0.00 0.00 36.95 2.12
4955 7462 2.641305 CTCCTTCTCTTGGAGGCATTG 58.359 52.381 2.09 0.00 45.39 2.82
4979 7486 1.380302 GATGTTGGCTCCTGTGGGT 59.620 57.895 0.00 0.00 0.00 4.51
4981 7488 0.037303 AGTGATGTTGGCTCCTGTGG 59.963 55.000 0.00 0.00 0.00 4.17
5010 7517 3.009143 GGGTAGGTCTTGTTCTTGGACAT 59.991 47.826 0.00 0.00 0.00 3.06
5025 7532 1.229529 CAGAGGTGGTGGGGTAGGT 60.230 63.158 0.00 0.00 0.00 3.08
5027 7534 2.670148 GCCAGAGGTGGTGGGGTAG 61.670 68.421 0.00 0.00 46.96 3.18
5041 7564 3.450457 AGACTAGAGAATTGACCAGCCAG 59.550 47.826 0.00 0.00 0.00 4.85
5049 7572 3.369892 GCCAAGGCAGACTAGAGAATTGA 60.370 47.826 6.14 0.00 41.49 2.57
5076 7599 6.917217 TTGACCCACAAATTGAAAATTCAC 57.083 33.333 0.00 0.00 34.60 3.18
5112 7635 3.616956 TCTCTCAACGGATGCTTTGAT 57.383 42.857 6.60 0.00 31.41 2.57
5153 7676 0.240945 CTTTTGAATTGGCGGCGAGT 59.759 50.000 12.98 0.63 0.00 4.18
5154 7677 0.456653 CCTTTTGAATTGGCGGCGAG 60.457 55.000 12.98 0.00 0.00 5.03
5156 7679 2.094066 GCCTTTTGAATTGGCGGCG 61.094 57.895 0.51 0.51 37.11 6.46
5187 7710 8.366401 CCTAGGATTAGTTTAGTTTAGTAGGGC 58.634 40.741 1.05 0.00 0.00 5.19
5209 7734 3.006752 GGCATCTGATGGTTCTCTCCTAG 59.993 52.174 18.60 0.00 0.00 3.02
5210 7735 2.968574 GGCATCTGATGGTTCTCTCCTA 59.031 50.000 18.60 0.00 0.00 2.94
5211 7736 1.767681 GGCATCTGATGGTTCTCTCCT 59.232 52.381 18.60 0.00 0.00 3.69
5212 7737 1.487976 TGGCATCTGATGGTTCTCTCC 59.512 52.381 18.60 9.90 0.00 3.71
5213 7738 2.559440 GTGGCATCTGATGGTTCTCTC 58.441 52.381 18.60 0.73 0.00 3.20
5214 7739 1.211457 GGTGGCATCTGATGGTTCTCT 59.789 52.381 18.60 0.00 0.00 3.10
5215 7740 1.211457 AGGTGGCATCTGATGGTTCTC 59.789 52.381 18.60 2.10 0.00 2.87
5216 7741 1.211457 GAGGTGGCATCTGATGGTTCT 59.789 52.381 18.60 0.00 0.00 3.01
5217 7742 1.211457 AGAGGTGGCATCTGATGGTTC 59.789 52.381 18.60 2.80 0.00 3.62
5218 7743 1.211457 GAGAGGTGGCATCTGATGGTT 59.789 52.381 18.60 0.00 0.00 3.67
5219 7744 0.835941 GAGAGGTGGCATCTGATGGT 59.164 55.000 18.60 0.00 0.00 3.55
5220 7745 0.249784 CGAGAGGTGGCATCTGATGG 60.250 60.000 18.60 0.00 0.00 3.51
5221 7746 0.749049 TCGAGAGGTGGCATCTGATG 59.251 55.000 4.20 13.26 0.00 3.07
5222 7747 1.489481 TTCGAGAGGTGGCATCTGAT 58.511 50.000 4.20 0.00 0.00 2.90
5223 7748 1.410517 GATTCGAGAGGTGGCATCTGA 59.589 52.381 4.20 0.00 0.00 3.27
5224 7749 1.411977 AGATTCGAGAGGTGGCATCTG 59.588 52.381 4.20 0.00 0.00 2.90
5225 7750 1.786937 AGATTCGAGAGGTGGCATCT 58.213 50.000 0.00 0.00 0.00 2.90
5226 7751 3.319405 TCTTAGATTCGAGAGGTGGCATC 59.681 47.826 0.00 0.00 0.00 3.91
5227 7752 3.300388 TCTTAGATTCGAGAGGTGGCAT 58.700 45.455 0.00 0.00 0.00 4.40
5228 7753 2.735151 TCTTAGATTCGAGAGGTGGCA 58.265 47.619 0.00 0.00 0.00 4.92
5229 7754 3.802948 TTCTTAGATTCGAGAGGTGGC 57.197 47.619 0.00 0.00 0.00 5.01
5230 7755 4.342378 TCCATTCTTAGATTCGAGAGGTGG 59.658 45.833 13.88 13.88 33.94 4.61
5231 7756 5.521906 TCCATTCTTAGATTCGAGAGGTG 57.478 43.478 0.00 0.00 0.00 4.00
5232 7757 6.463614 CCATTCCATTCTTAGATTCGAGAGGT 60.464 42.308 0.00 0.00 0.00 3.85
5233 7758 5.931146 CCATTCCATTCTTAGATTCGAGAGG 59.069 44.000 0.00 0.00 0.00 3.69
5234 7759 5.407995 GCCATTCCATTCTTAGATTCGAGAG 59.592 44.000 0.00 0.00 0.00 3.20
5235 7760 5.163311 TGCCATTCCATTCTTAGATTCGAGA 60.163 40.000 0.00 0.00 0.00 4.04
5236 7761 5.059161 TGCCATTCCATTCTTAGATTCGAG 58.941 41.667 0.00 0.00 0.00 4.04
5237 7762 5.034852 TGCCATTCCATTCTTAGATTCGA 57.965 39.130 0.00 0.00 0.00 3.71
5238 7763 4.818546 ACTGCCATTCCATTCTTAGATTCG 59.181 41.667 0.00 0.00 0.00 3.34
5239 7764 5.049818 CGACTGCCATTCCATTCTTAGATTC 60.050 44.000 0.00 0.00 0.00 2.52
5240 7765 4.818546 CGACTGCCATTCCATTCTTAGATT 59.181 41.667 0.00 0.00 0.00 2.40
5241 7766 4.384056 CGACTGCCATTCCATTCTTAGAT 58.616 43.478 0.00 0.00 0.00 1.98
5242 7767 3.432186 CCGACTGCCATTCCATTCTTAGA 60.432 47.826 0.00 0.00 0.00 2.10
5243 7768 2.874701 CCGACTGCCATTCCATTCTTAG 59.125 50.000 0.00 0.00 0.00 2.18
5244 7769 2.503765 TCCGACTGCCATTCCATTCTTA 59.496 45.455 0.00 0.00 0.00 2.10
5245 7770 1.281867 TCCGACTGCCATTCCATTCTT 59.718 47.619 0.00 0.00 0.00 2.52
5246 7771 0.911769 TCCGACTGCCATTCCATTCT 59.088 50.000 0.00 0.00 0.00 2.40
5247 7772 1.672881 CTTCCGACTGCCATTCCATTC 59.327 52.381 0.00 0.00 0.00 2.67
5248 7773 1.004745 ACTTCCGACTGCCATTCCATT 59.995 47.619 0.00 0.00 0.00 3.16
5249 7774 0.620556 ACTTCCGACTGCCATTCCAT 59.379 50.000 0.00 0.00 0.00 3.41
5250 7775 1.207089 CTACTTCCGACTGCCATTCCA 59.793 52.381 0.00 0.00 0.00 3.53
5251 7776 1.941325 CTACTTCCGACTGCCATTCC 58.059 55.000 0.00 0.00 0.00 3.01
5252 7777 1.134670 AGCTACTTCCGACTGCCATTC 60.135 52.381 0.00 0.00 0.00 2.67
5253 7778 0.905357 AGCTACTTCCGACTGCCATT 59.095 50.000 0.00 0.00 0.00 3.16
5254 7779 0.461961 GAGCTACTTCCGACTGCCAT 59.538 55.000 0.00 0.00 0.00 4.40
5255 7780 1.890894 GAGCTACTTCCGACTGCCA 59.109 57.895 0.00 0.00 0.00 4.92
5256 7781 1.226717 CGAGCTACTTCCGACTGCC 60.227 63.158 0.00 0.00 0.00 4.85
5257 7782 1.874466 GCGAGCTACTTCCGACTGC 60.874 63.158 0.00 0.00 0.00 4.40
5258 7783 0.109272 TTGCGAGCTACTTCCGACTG 60.109 55.000 0.00 0.00 0.00 3.51
5259 7784 0.109226 GTTGCGAGCTACTTCCGACT 60.109 55.000 2.60 0.00 0.00 4.18
5260 7785 0.388134 TGTTGCGAGCTACTTCCGAC 60.388 55.000 10.57 0.00 0.00 4.79
5261 7786 0.315886 TTGTTGCGAGCTACTTCCGA 59.684 50.000 10.57 0.00 0.00 4.55
5262 7787 0.438830 GTTGTTGCGAGCTACTTCCG 59.561 55.000 10.57 0.00 0.00 4.30
5263 7788 0.796927 GGTTGTTGCGAGCTACTTCC 59.203 55.000 10.57 8.82 0.00 3.46
5264 7789 1.727335 GAGGTTGTTGCGAGCTACTTC 59.273 52.381 10.57 4.35 0.00 3.01
5265 7790 1.070134 TGAGGTTGTTGCGAGCTACTT 59.930 47.619 10.57 0.00 0.00 2.24
5266 7791 0.679505 TGAGGTTGTTGCGAGCTACT 59.320 50.000 10.57 0.00 0.00 2.57
5267 7792 1.461127 CTTGAGGTTGTTGCGAGCTAC 59.539 52.381 2.86 2.86 0.00 3.58
5268 7793 1.070134 ACTTGAGGTTGTTGCGAGCTA 59.930 47.619 0.00 0.00 0.00 3.32
5269 7794 0.179045 ACTTGAGGTTGTTGCGAGCT 60.179 50.000 0.00 0.00 0.00 4.09
5270 7795 1.461127 CTACTTGAGGTTGTTGCGAGC 59.539 52.381 0.00 0.00 0.00 5.03
5271 7796 2.989840 CTCTACTTGAGGTTGTTGCGAG 59.010 50.000 0.00 0.00 39.08 5.03
5272 7797 3.026630 CTCTACTTGAGGTTGTTGCGA 57.973 47.619 0.00 0.00 39.08 5.10
5282 7807 6.154203 TCATCTTATGTGCCTCTACTTGAG 57.846 41.667 0.00 0.00 42.30 3.02
5283 7808 5.452496 GCTCATCTTATGTGCCTCTACTTGA 60.452 44.000 3.21 0.00 42.28 3.02
5284 7809 4.749099 GCTCATCTTATGTGCCTCTACTTG 59.251 45.833 3.21 0.00 42.28 3.16
5285 7810 4.500545 CGCTCATCTTATGTGCCTCTACTT 60.501 45.833 8.01 0.00 44.47 2.24
5286 7811 3.005261 CGCTCATCTTATGTGCCTCTACT 59.995 47.826 8.01 0.00 44.47 2.57
5287 7812 3.243569 ACGCTCATCTTATGTGCCTCTAC 60.244 47.826 8.01 0.00 44.47 2.59
5288 7813 2.959030 ACGCTCATCTTATGTGCCTCTA 59.041 45.455 8.01 0.00 44.47 2.43
5289 7814 1.759445 ACGCTCATCTTATGTGCCTCT 59.241 47.619 8.01 0.00 44.47 3.69
5290 7815 2.231215 ACGCTCATCTTATGTGCCTC 57.769 50.000 8.01 0.00 44.47 4.70
5291 7816 2.430694 TGTACGCTCATCTTATGTGCCT 59.569 45.455 8.01 1.08 44.47 4.75
5292 7817 2.821546 TGTACGCTCATCTTATGTGCC 58.178 47.619 8.01 0.00 44.47 5.01
5293 7818 6.525121 TTATTGTACGCTCATCTTATGTGC 57.475 37.500 4.32 4.32 44.03 4.57
5294 7819 7.905126 TGTTTATTGTACGCTCATCTTATGTG 58.095 34.615 0.00 0.00 0.00 3.21
5295 7820 8.551205 CATGTTTATTGTACGCTCATCTTATGT 58.449 33.333 0.00 0.00 0.00 2.29
5296 7821 7.531871 GCATGTTTATTGTACGCTCATCTTATG 59.468 37.037 0.00 0.00 0.00 1.90
5297 7822 7.226523 TGCATGTTTATTGTACGCTCATCTTAT 59.773 33.333 0.00 0.00 0.00 1.73
5298 7823 6.536941 TGCATGTTTATTGTACGCTCATCTTA 59.463 34.615 0.00 0.00 0.00 2.10
5299 7824 5.353956 TGCATGTTTATTGTACGCTCATCTT 59.646 36.000 0.00 0.00 0.00 2.40
5300 7825 4.875536 TGCATGTTTATTGTACGCTCATCT 59.124 37.500 0.00 0.00 0.00 2.90
5301 7826 5.155509 TGCATGTTTATTGTACGCTCATC 57.844 39.130 0.00 0.00 0.00 2.92
5302 7827 5.513376 CATGCATGTTTATTGTACGCTCAT 58.487 37.500 18.91 0.00 0.00 2.90
5303 7828 4.730324 GCATGCATGTTTATTGTACGCTCA 60.730 41.667 26.79 0.00 0.00 4.26
5304 7829 3.725740 GCATGCATGTTTATTGTACGCTC 59.274 43.478 26.79 2.16 0.00 5.03
5305 7830 3.128415 TGCATGCATGTTTATTGTACGCT 59.872 39.130 26.79 0.00 0.00 5.07
5306 7831 3.433709 TGCATGCATGTTTATTGTACGC 58.566 40.909 26.79 9.23 0.00 4.42
5307 7832 7.676731 TTAATGCATGCATGTTTATTGTACG 57.323 32.000 32.79 0.00 36.68 3.67
5314 7839 9.311916 GTTCCTTAATTAATGCATGCATGTTTA 57.688 29.630 32.79 24.31 36.68 2.01
5315 7840 7.823310 TGTTCCTTAATTAATGCATGCATGTTT 59.177 29.630 32.79 25.23 36.68 2.83
5316 7841 7.329499 TGTTCCTTAATTAATGCATGCATGTT 58.671 30.769 32.79 26.29 36.68 2.71
5317 7842 6.876155 TGTTCCTTAATTAATGCATGCATGT 58.124 32.000 32.79 23.06 36.68 3.21
5318 7843 7.254522 GGTTGTTCCTTAATTAATGCATGCATG 60.255 37.037 32.79 22.70 36.68 4.06
5319 7844 6.762661 GGTTGTTCCTTAATTAATGCATGCAT 59.237 34.615 27.46 27.46 38.46 3.96
5320 7845 6.105333 GGTTGTTCCTTAATTAATGCATGCA 58.895 36.000 25.04 25.04 0.00 3.96
5321 7846 5.523552 GGGTTGTTCCTTAATTAATGCATGC 59.476 40.000 11.82 11.82 36.25 4.06
5322 7847 6.638610 TGGGTTGTTCCTTAATTAATGCATG 58.361 36.000 0.00 0.00 36.25 4.06
5323 7848 6.865834 TGGGTTGTTCCTTAATTAATGCAT 57.134 33.333 0.00 0.00 36.25 3.96
5324 7849 6.672266 TTGGGTTGTTCCTTAATTAATGCA 57.328 33.333 0.00 0.00 36.25 3.96
5325 7850 7.971183 TTTTGGGTTGTTCCTTAATTAATGC 57.029 32.000 0.00 0.00 36.25 3.56
5326 7851 8.945057 CCATTTTGGGTTGTTCCTTAATTAATG 58.055 33.333 0.00 0.00 32.67 1.90
5327 7852 8.885346 TCCATTTTGGGTTGTTCCTTAATTAAT 58.115 29.630 0.00 0.00 38.32 1.40
5328 7853 8.151596 GTCCATTTTGGGTTGTTCCTTAATTAA 58.848 33.333 0.00 0.00 38.32 1.40
5329 7854 7.290248 TGTCCATTTTGGGTTGTTCCTTAATTA 59.710 33.333 0.00 0.00 38.32 1.40
5330 7855 6.100424 TGTCCATTTTGGGTTGTTCCTTAATT 59.900 34.615 0.00 0.00 38.32 1.40
5331 7856 5.604650 TGTCCATTTTGGGTTGTTCCTTAAT 59.395 36.000 0.00 0.00 38.32 1.40
5332 7857 4.962995 TGTCCATTTTGGGTTGTTCCTTAA 59.037 37.500 0.00 0.00 38.32 1.85
5333 7858 4.547671 TGTCCATTTTGGGTTGTTCCTTA 58.452 39.130 0.00 0.00 38.32 2.69
5334 7859 3.379452 TGTCCATTTTGGGTTGTTCCTT 58.621 40.909 0.00 0.00 38.32 3.36
5335 7860 2.965147 CTGTCCATTTTGGGTTGTTCCT 59.035 45.455 0.00 0.00 38.32 3.36
5336 7861 2.962421 TCTGTCCATTTTGGGTTGTTCC 59.038 45.455 0.00 0.00 38.32 3.62
5337 7862 4.620982 CTTCTGTCCATTTTGGGTTGTTC 58.379 43.478 0.00 0.00 38.32 3.18
5338 7863 3.181466 GCTTCTGTCCATTTTGGGTTGTT 60.181 43.478 0.00 0.00 38.32 2.83
5339 7864 2.365293 GCTTCTGTCCATTTTGGGTTGT 59.635 45.455 0.00 0.00 38.32 3.32
5340 7865 2.364970 TGCTTCTGTCCATTTTGGGTTG 59.635 45.455 0.00 0.00 38.32 3.77
5341 7866 2.365293 GTGCTTCTGTCCATTTTGGGTT 59.635 45.455 0.00 0.00 38.32 4.11
5342 7867 1.963515 GTGCTTCTGTCCATTTTGGGT 59.036 47.619 0.00 0.00 38.32 4.51
5343 7868 1.962807 TGTGCTTCTGTCCATTTTGGG 59.037 47.619 0.00 0.00 38.32 4.12
5344 7869 2.608752 GCTGTGCTTCTGTCCATTTTGG 60.609 50.000 0.00 0.00 39.43 3.28
5345 7870 2.034939 TGCTGTGCTTCTGTCCATTTTG 59.965 45.455 0.00 0.00 0.00 2.44
5346 7871 2.309613 TGCTGTGCTTCTGTCCATTTT 58.690 42.857 0.00 0.00 0.00 1.82
5347 7872 1.985473 TGCTGTGCTTCTGTCCATTT 58.015 45.000 0.00 0.00 0.00 2.32
5348 7873 2.211250 ATGCTGTGCTTCTGTCCATT 57.789 45.000 0.00 0.00 0.00 3.16
5349 7874 2.026915 TGTATGCTGTGCTTCTGTCCAT 60.027 45.455 0.00 0.00 0.00 3.41
5350 7875 1.347378 TGTATGCTGTGCTTCTGTCCA 59.653 47.619 0.00 0.00 0.00 4.02
5351 7876 2.099141 TGTATGCTGTGCTTCTGTCC 57.901 50.000 0.00 0.00 0.00 4.02
5352 7877 4.488126 TTTTGTATGCTGTGCTTCTGTC 57.512 40.909 0.00 0.00 0.00 3.51
5353 7878 4.097741 TGTTTTTGTATGCTGTGCTTCTGT 59.902 37.500 0.00 0.00 0.00 3.41
5354 7879 4.442073 GTGTTTTTGTATGCTGTGCTTCTG 59.558 41.667 0.00 0.00 0.00 3.02
5355 7880 4.097741 TGTGTTTTTGTATGCTGTGCTTCT 59.902 37.500 0.00 0.00 0.00 2.85
5356 7881 4.358851 TGTGTTTTTGTATGCTGTGCTTC 58.641 39.130 0.00 0.00 0.00 3.86
5357 7882 4.383850 TGTGTTTTTGTATGCTGTGCTT 57.616 36.364 0.00 0.00 0.00 3.91
5358 7883 4.589216 ATGTGTTTTTGTATGCTGTGCT 57.411 36.364 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.