Multiple sequence alignment - TraesCS7B01G467500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G467500 chr7B 100.000 3371 0 0 1 3371 724983775 724980405 0.000000e+00 6226.0
1 TraesCS7B01G467500 chr7B 84.557 1457 158 38 938 2371 724168441 724169853 0.000000e+00 1382.0
2 TraesCS7B01G467500 chr7B 83.907 988 129 12 963 1946 724285343 724286304 0.000000e+00 917.0
3 TraesCS7B01G467500 chr7B 83.871 992 122 14 966 1946 724791124 724792088 0.000000e+00 911.0
4 TraesCS7B01G467500 chr7B 83.197 976 130 14 969 1940 724401361 724402306 0.000000e+00 863.0
5 TraesCS7B01G467500 chr7B 88.981 481 32 13 99 575 732476383 732475920 2.920000e-160 575.0
6 TraesCS7B01G467500 chr7B 86.820 478 60 2 1969 2443 724792063 724792540 6.400000e-147 531.0
7 TraesCS7B01G467500 chr7B 86.402 478 62 2 1969 2443 724286279 724286756 1.390000e-143 520.0
8 TraesCS7B01G467500 chr7B 88.112 286 23 5 577 852 166767434 166767718 2.510000e-86 329.0
9 TraesCS7B01G467500 chr7B 81.846 325 48 7 2239 2558 723971900 723972218 2.580000e-66 263.0
10 TraesCS7B01G467500 chr7B 79.861 144 15 8 2482 2613 724792555 724792696 3.580000e-15 93.5
11 TraesCS7B01G467500 chrUn 92.960 2429 129 19 888 3298 87733923 87736327 0.000000e+00 3500.0
12 TraesCS7B01G467500 chrUn 83.792 981 121 18 966 1940 93228086 93229034 0.000000e+00 896.0
13 TraesCS7B01G467500 chrUn 88.571 280 21 7 578 852 23672788 23672515 2.510000e-86 329.0
14 TraesCS7B01G467500 chr7D 94.987 1516 71 5 1100 2613 625369975 625368463 0.000000e+00 2374.0
15 TraesCS7B01G467500 chr7D 84.599 1422 158 27 970 2365 625121542 625120156 0.000000e+00 1356.0
16 TraesCS7B01G467500 chr7D 89.362 282 24 1 577 852 45546002 45545721 1.920000e-92 350.0
17 TraesCS7B01G467500 chr7D 82.337 368 51 6 1030 1397 625155339 625154986 1.170000e-79 307.0
18 TraesCS7B01G467500 chr7D 82.229 332 41 13 2789 3119 625109839 625109525 1.540000e-68 270.0
19 TraesCS7B01G467500 chr7D 78.788 264 37 12 2979 3230 625119567 625119311 3.480000e-35 159.0
20 TraesCS7B01G467500 chr7D 91.964 112 9 0 3260 3371 625367480 625367369 1.250000e-34 158.0
21 TraesCS7B01G467500 chr7D 84.277 159 20 3 2403 2558 625120151 625119995 2.100000e-32 150.0
22 TraesCS7B01G467500 chr7D 100.000 34 0 0 860 893 556222622 556222589 2.810000e-06 63.9
23 TraesCS7B01G467500 chr7D 97.368 38 0 1 860 896 556230340 556230377 2.810000e-06 63.9
24 TraesCS7B01G467500 chr7D 100.000 32 0 0 860 891 413241596 413241627 3.630000e-05 60.2
25 TraesCS7B01G467500 chr7A 84.250 1454 166 26 938 2365 720953568 720954984 0.000000e+00 1358.0
26 TraesCS7B01G467500 chr7A 83.768 844 97 21 1105 1946 721024775 721023970 0.000000e+00 763.0
27 TraesCS7B01G467500 chr7A 88.367 447 50 2 1969 2413 721023995 721023549 1.380000e-148 536.0
28 TraesCS7B01G467500 chr7A 84.273 337 26 6 27 363 652296099 652295790 1.520000e-78 303.0
29 TraesCS7B01G467500 chr7A 89.151 212 19 4 367 576 652295814 652295605 9.280000e-66 261.0
30 TraesCS7B01G467500 chr7A 82.667 225 24 7 2403 2613 720954989 720955212 5.740000e-43 185.0
31 TraesCS7B01G467500 chr7A 76.610 295 52 12 2252 2537 672312627 672312913 2.710000e-31 147.0
32 TraesCS7B01G467500 chr6B 92.517 588 30 3 1 574 648070080 648070667 0.000000e+00 830.0
33 TraesCS7B01G467500 chr6B 88.571 280 23 4 577 852 687019351 687019077 6.970000e-87 331.0
34 TraesCS7B01G467500 chr3B 90.878 581 43 4 1 579 89380372 89379800 0.000000e+00 771.0
35 TraesCS7B01G467500 chr3B 87.110 481 42 10 99 576 79302286 79302749 8.280000e-146 527.0
36 TraesCS7B01G467500 chr2D 86.432 597 51 13 1 576 574567717 574568304 7.940000e-176 627.0
37 TraesCS7B01G467500 chr2D 100.000 31 0 0 860 890 574568308 574568338 1.310000e-04 58.4
38 TraesCS7B01G467500 chr6D 91.142 429 27 7 148 575 422224423 422224841 3.770000e-159 571.0
39 TraesCS7B01G467500 chr6D 92.857 98 7 0 1 98 422223689 422223786 3.510000e-30 143.0
40 TraesCS7B01G467500 chr3D 93.145 248 17 0 605 852 590166076 590165829 6.870000e-97 364.0
41 TraesCS7B01G467500 chr1B 92.800 250 18 0 605 854 633975975 633976224 2.470000e-96 363.0
42 TraesCS7B01G467500 chr5B 89.170 277 24 3 577 852 620017628 620017357 1.160000e-89 340.0
43 TraesCS7B01G467500 chr5B 89.552 268 23 2 574 836 531526418 531526685 5.390000e-88 335.0
44 TraesCS7B01G467500 chr5B 88.448 277 30 2 577 852 462751686 462751961 1.940000e-87 333.0
45 TraesCS7B01G467500 chr5B 100.000 33 0 0 860 892 408954918 408954950 1.010000e-05 62.1
46 TraesCS7B01G467500 chr3A 85.846 325 36 10 261 579 13156296 13155976 1.500000e-88 337.0
47 TraesCS7B01G467500 chr3A 78.770 504 78 18 95 576 598944661 598945157 9.080000e-81 311.0
48 TraesCS7B01G467500 chr3A 100.000 34 0 0 862 895 598945163 598945196 2.810000e-06 63.9
49 TraesCS7B01G467500 chr1D 89.552 268 23 1 593 855 386376026 386375759 5.390000e-88 335.0
50 TraesCS7B01G467500 chr6A 91.845 233 17 2 146 377 158089350 158089581 1.170000e-84 324.0
51 TraesCS7B01G467500 chr6A 89.216 204 21 1 373 575 158093884 158094087 1.550000e-63 254.0
52 TraesCS7B01G467500 chr6A 88.272 162 12 1 1 162 158088681 158088835 1.600000e-43 187.0
53 TraesCS7B01G467500 chr6A 84.431 167 24 2 2448 2613 493360737 493360572 2.690000e-36 163.0
54 TraesCS7B01G467500 chr6A 97.222 36 0 1 857 891 158086389 158086354 3.630000e-05 60.2
55 TraesCS7B01G467500 chr6A 100.000 31 0 0 860 890 158094092 158094122 1.310000e-04 58.4
56 TraesCS7B01G467500 chr4B 81.265 411 66 11 2011 2412 466694997 466694589 4.200000e-84 322.0
57 TraesCS7B01G467500 chr2A 83.607 122 18 2 2482 2602 223888553 223888673 2.750000e-21 113.0
58 TraesCS7B01G467500 chr5A 97.143 35 1 0 860 894 536259870 536259904 3.630000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G467500 chr7B 724980405 724983775 3370 True 6226.000000 6226 100.000000 1 3371 1 chr7B.!!$R1 3370
1 TraesCS7B01G467500 chr7B 724168441 724169853 1412 False 1382.000000 1382 84.557000 938 2371 1 chr7B.!!$F3 1433
2 TraesCS7B01G467500 chr7B 724401361 724402306 945 False 863.000000 863 83.197000 969 1940 1 chr7B.!!$F4 971
3 TraesCS7B01G467500 chr7B 724285343 724286756 1413 False 718.500000 917 85.154500 963 2443 2 chr7B.!!$F5 1480
4 TraesCS7B01G467500 chr7B 724791124 724792696 1572 False 511.833333 911 83.517333 966 2613 3 chr7B.!!$F6 1647
5 TraesCS7B01G467500 chrUn 87733923 87736327 2404 False 3500.000000 3500 92.960000 888 3298 1 chrUn.!!$F1 2410
6 TraesCS7B01G467500 chrUn 93228086 93229034 948 False 896.000000 896 83.792000 966 1940 1 chrUn.!!$F2 974
7 TraesCS7B01G467500 chr7D 625367369 625369975 2606 True 1266.000000 2374 93.475500 1100 3371 2 chr7D.!!$R6 2271
8 TraesCS7B01G467500 chr7D 625119311 625121542 2231 True 555.000000 1356 82.554667 970 3230 3 chr7D.!!$R5 2260
9 TraesCS7B01G467500 chr7A 720953568 720955212 1644 False 771.500000 1358 83.458500 938 2613 2 chr7A.!!$F2 1675
10 TraesCS7B01G467500 chr7A 721023549 721024775 1226 True 649.500000 763 86.067500 1105 2413 2 chr7A.!!$R2 1308
11 TraesCS7B01G467500 chr6B 648070080 648070667 587 False 830.000000 830 92.517000 1 574 1 chr6B.!!$F1 573
12 TraesCS7B01G467500 chr3B 89379800 89380372 572 True 771.000000 771 90.878000 1 579 1 chr3B.!!$R1 578
13 TraesCS7B01G467500 chr2D 574567717 574568338 621 False 342.700000 627 93.216000 1 890 2 chr2D.!!$F1 889
14 TraesCS7B01G467500 chr6D 422223689 422224841 1152 False 357.000000 571 91.999500 1 575 2 chr6D.!!$F1 574
15 TraesCS7B01G467500 chr6A 158088681 158089581 900 False 255.500000 324 90.058500 1 377 2 chr6A.!!$F1 376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 987 0.037734 GAGGCGAGGGGAAAAAGGAA 59.962 55.0 0.00 0.00 0.00 3.36 F
656 1293 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.0 0.00 0.00 37.66 5.14 F
705 1342 0.321830 TTTTCTAAAGGTCGGGCCGG 60.322 55.0 27.98 8.04 43.70 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1526 2189 1.069703 CGACATAATGGAATGCGGCAG 60.070 52.381 9.25 0.0 0.00 4.85 R
1529 2192 1.939934 ACACGACATAATGGAATGCGG 59.060 47.619 0.00 0.0 33.58 5.69 R
2383 3227 3.285484 CTTCTTATGAAGGCACCAGCAT 58.715 45.455 9.92 0.0 44.33 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.637872 AGTTGGACAGTAGGCAAGCTAA 59.362 45.455 0.00 0.00 0.00 3.09
67 69 4.828925 GAGGAGGCTGACTGCGGC 62.829 72.222 0.00 0.00 43.20 6.53
119 121 2.282180 CCCTCACCCAAACCCACG 60.282 66.667 0.00 0.00 0.00 4.94
126 128 2.131067 CCCAAACCCACGCCTTTGT 61.131 57.895 0.00 0.00 0.00 2.83
177 786 2.050351 CTGCCGACGAACGACACT 60.050 61.111 0.00 0.00 45.77 3.55
310 947 4.253257 GCGACGACCGAGCCCTAG 62.253 72.222 0.00 0.00 41.76 3.02
311 948 4.253257 CGACGACCGAGCCCTAGC 62.253 72.222 0.00 0.00 41.76 3.42
312 949 4.253257 GACGACCGAGCCCTAGCG 62.253 72.222 0.00 0.00 46.67 4.26
313 950 4.790962 ACGACCGAGCCCTAGCGA 62.791 66.667 0.00 0.00 46.67 4.93
314 951 3.515286 CGACCGAGCCCTAGCGAA 61.515 66.667 0.00 0.00 46.67 4.70
315 952 2.104530 GACCGAGCCCTAGCGAAC 59.895 66.667 0.00 0.00 46.67 3.95
316 953 2.678934 ACCGAGCCCTAGCGAACA 60.679 61.111 0.00 0.00 46.67 3.18
317 954 2.105128 CCGAGCCCTAGCGAACAG 59.895 66.667 0.00 0.00 46.67 3.16
318 955 2.415608 CCGAGCCCTAGCGAACAGA 61.416 63.158 0.00 0.00 46.67 3.41
319 956 1.511305 CGAGCCCTAGCGAACAGAA 59.489 57.895 0.00 0.00 46.67 3.02
320 957 0.526524 CGAGCCCTAGCGAACAGAAG 60.527 60.000 0.00 0.00 46.67 2.85
321 958 0.818296 GAGCCCTAGCGAACAGAAGA 59.182 55.000 0.00 0.00 46.67 2.87
322 959 0.820871 AGCCCTAGCGAACAGAAGAG 59.179 55.000 0.00 0.00 46.67 2.85
323 960 0.808060 GCCCTAGCGAACAGAAGAGC 60.808 60.000 0.00 0.00 0.00 4.09
324 961 0.526524 CCCTAGCGAACAGAAGAGCG 60.527 60.000 0.00 0.00 34.34 5.03
325 962 0.452184 CCTAGCGAACAGAAGAGCGA 59.548 55.000 0.00 0.00 34.34 4.93
326 963 1.066303 CCTAGCGAACAGAAGAGCGAT 59.934 52.381 0.00 0.00 34.34 4.58
327 964 2.480416 CCTAGCGAACAGAAGAGCGATT 60.480 50.000 0.00 0.00 34.34 3.34
328 965 1.634702 AGCGAACAGAAGAGCGATTC 58.365 50.000 0.00 0.00 34.34 2.52
329 966 1.203523 AGCGAACAGAAGAGCGATTCT 59.796 47.619 1.09 1.09 40.17 2.40
335 972 0.463620 AGAAGAGCGATTCTGGAGGC 59.536 55.000 5.76 0.00 38.12 4.70
336 973 0.873743 GAAGAGCGATTCTGGAGGCG 60.874 60.000 0.00 0.00 35.91 5.52
337 974 1.323271 AAGAGCGATTCTGGAGGCGA 61.323 55.000 0.00 0.00 35.91 5.54
338 975 1.299773 GAGCGATTCTGGAGGCGAG 60.300 63.158 0.00 0.00 0.00 5.03
339 976 2.279784 GCGATTCTGGAGGCGAGG 60.280 66.667 0.00 0.00 0.00 4.63
340 977 2.419198 CGATTCTGGAGGCGAGGG 59.581 66.667 0.00 0.00 0.00 4.30
341 978 2.825264 GATTCTGGAGGCGAGGGG 59.175 66.667 0.00 0.00 0.00 4.79
342 979 1.762460 GATTCTGGAGGCGAGGGGA 60.762 63.158 0.00 0.00 0.00 4.81
343 980 1.306997 ATTCTGGAGGCGAGGGGAA 60.307 57.895 0.00 0.00 0.00 3.97
344 981 0.914417 ATTCTGGAGGCGAGGGGAAA 60.914 55.000 0.00 0.00 0.00 3.13
345 982 1.131303 TTCTGGAGGCGAGGGGAAAA 61.131 55.000 0.00 0.00 0.00 2.29
346 983 1.131303 TCTGGAGGCGAGGGGAAAAA 61.131 55.000 0.00 0.00 0.00 1.94
347 984 0.678048 CTGGAGGCGAGGGGAAAAAG 60.678 60.000 0.00 0.00 0.00 2.27
348 985 1.378646 GGAGGCGAGGGGAAAAAGG 60.379 63.158 0.00 0.00 0.00 3.11
349 986 1.683441 GAGGCGAGGGGAAAAAGGA 59.317 57.895 0.00 0.00 0.00 3.36
350 987 0.037734 GAGGCGAGGGGAAAAAGGAA 59.962 55.000 0.00 0.00 0.00 3.36
351 988 0.481128 AGGCGAGGGGAAAAAGGAAA 59.519 50.000 0.00 0.00 0.00 3.13
352 989 0.888619 GGCGAGGGGAAAAAGGAAAG 59.111 55.000 0.00 0.00 0.00 2.62
353 990 1.546998 GGCGAGGGGAAAAAGGAAAGA 60.547 52.381 0.00 0.00 0.00 2.52
354 991 2.235891 GCGAGGGGAAAAAGGAAAGAA 58.764 47.619 0.00 0.00 0.00 2.52
355 992 2.626266 GCGAGGGGAAAAAGGAAAGAAA 59.374 45.455 0.00 0.00 0.00 2.52
356 993 3.305403 GCGAGGGGAAAAAGGAAAGAAAG 60.305 47.826 0.00 0.00 0.00 2.62
357 994 3.255888 CGAGGGGAAAAAGGAAAGAAAGG 59.744 47.826 0.00 0.00 0.00 3.11
358 995 4.480115 GAGGGGAAAAAGGAAAGAAAGGA 58.520 43.478 0.00 0.00 0.00 3.36
359 996 4.890988 AGGGGAAAAAGGAAAGAAAGGAA 58.109 39.130 0.00 0.00 0.00 3.36
360 997 4.901849 AGGGGAAAAAGGAAAGAAAGGAAG 59.098 41.667 0.00 0.00 0.00 3.46
361 998 4.899457 GGGGAAAAAGGAAAGAAAGGAAGA 59.101 41.667 0.00 0.00 0.00 2.87
362 999 5.011125 GGGGAAAAAGGAAAGAAAGGAAGAG 59.989 44.000 0.00 0.00 0.00 2.85
363 1000 5.011125 GGGAAAAAGGAAAGAAAGGAAGAGG 59.989 44.000 0.00 0.00 0.00 3.69
364 1001 5.011125 GGAAAAAGGAAAGAAAGGAAGAGGG 59.989 44.000 0.00 0.00 0.00 4.30
365 1002 4.816048 AAAGGAAAGAAAGGAAGAGGGT 57.184 40.909 0.00 0.00 0.00 4.34
366 1003 3.797559 AGGAAAGAAAGGAAGAGGGTG 57.202 47.619 0.00 0.00 0.00 4.61
367 1004 3.327439 AGGAAAGAAAGGAAGAGGGTGA 58.673 45.455 0.00 0.00 0.00 4.02
368 1005 3.329225 AGGAAAGAAAGGAAGAGGGTGAG 59.671 47.826 0.00 0.00 0.00 3.51
369 1006 3.560239 GGAAAGAAAGGAAGAGGGTGAGG 60.560 52.174 0.00 0.00 0.00 3.86
370 1007 1.662686 AGAAAGGAAGAGGGTGAGGG 58.337 55.000 0.00 0.00 0.00 4.30
371 1008 0.621082 GAAAGGAAGAGGGTGAGGGG 59.379 60.000 0.00 0.00 0.00 4.79
372 1009 0.196118 AAAGGAAGAGGGTGAGGGGA 59.804 55.000 0.00 0.00 0.00 4.81
373 1010 0.196118 AAGGAAGAGGGTGAGGGGAA 59.804 55.000 0.00 0.00 0.00 3.97
374 1011 0.196118 AGGAAGAGGGTGAGGGGAAA 59.804 55.000 0.00 0.00 0.00 3.13
375 1012 1.073098 GGAAGAGGGTGAGGGGAAAA 58.927 55.000 0.00 0.00 0.00 2.29
376 1013 1.004862 GGAAGAGGGTGAGGGGAAAAG 59.995 57.143 0.00 0.00 0.00 2.27
377 1014 1.004862 GAAGAGGGTGAGGGGAAAAGG 59.995 57.143 0.00 0.00 0.00 3.11
378 1015 0.196118 AGAGGGTGAGGGGAAAAGGA 59.804 55.000 0.00 0.00 0.00 3.36
379 1016 1.073098 GAGGGTGAGGGGAAAAGGAA 58.927 55.000 0.00 0.00 0.00 3.36
380 1017 1.427753 GAGGGTGAGGGGAAAAGGAAA 59.572 52.381 0.00 0.00 0.00 3.13
381 1018 1.429299 AGGGTGAGGGGAAAAGGAAAG 59.571 52.381 0.00 0.00 0.00 2.62
382 1019 1.427753 GGGTGAGGGGAAAAGGAAAGA 59.572 52.381 0.00 0.00 0.00 2.52
383 1020 2.158370 GGGTGAGGGGAAAAGGAAAGAA 60.158 50.000 0.00 0.00 0.00 2.52
384 1021 3.572642 GGTGAGGGGAAAAGGAAAGAAA 58.427 45.455 0.00 0.00 0.00 2.52
385 1022 3.574396 GGTGAGGGGAAAAGGAAAGAAAG 59.426 47.826 0.00 0.00 0.00 2.62
386 1023 4.470602 GTGAGGGGAAAAGGAAAGAAAGA 58.529 43.478 0.00 0.00 0.00 2.52
387 1024 4.893524 GTGAGGGGAAAAGGAAAGAAAGAA 59.106 41.667 0.00 0.00 0.00 2.52
388 1025 5.010112 GTGAGGGGAAAAGGAAAGAAAGAAG 59.990 44.000 0.00 0.00 0.00 2.85
389 1026 5.103686 TGAGGGGAAAAGGAAAGAAAGAAGA 60.104 40.000 0.00 0.00 0.00 2.87
390 1027 5.389520 AGGGGAAAAGGAAAGAAAGAAGAG 58.610 41.667 0.00 0.00 0.00 2.85
391 1028 5.134509 AGGGGAAAAGGAAAGAAAGAAGAGA 59.865 40.000 0.00 0.00 0.00 3.10
392 1029 5.475220 GGGGAAAAGGAAAGAAAGAAGAGAG 59.525 44.000 0.00 0.00 0.00 3.20
393 1030 6.299922 GGGAAAAGGAAAGAAAGAAGAGAGA 58.700 40.000 0.00 0.00 0.00 3.10
394 1031 6.429692 GGGAAAAGGAAAGAAAGAAGAGAGAG 59.570 42.308 0.00 0.00 0.00 3.20
395 1032 7.220740 GGAAAAGGAAAGAAAGAAGAGAGAGA 58.779 38.462 0.00 0.00 0.00 3.10
396 1033 7.172532 GGAAAAGGAAAGAAAGAAGAGAGAGAC 59.827 40.741 0.00 0.00 0.00 3.36
397 1034 6.739331 AAGGAAAGAAAGAAGAGAGAGACA 57.261 37.500 0.00 0.00 0.00 3.41
398 1035 6.739331 AGGAAAGAAAGAAGAGAGAGACAA 57.261 37.500 0.00 0.00 0.00 3.18
399 1036 6.521162 AGGAAAGAAAGAAGAGAGAGACAAC 58.479 40.000 0.00 0.00 0.00 3.32
400 1037 5.699001 GGAAAGAAAGAAGAGAGAGACAACC 59.301 44.000 0.00 0.00 0.00 3.77
401 1038 4.513198 AGAAAGAAGAGAGAGACAACCG 57.487 45.455 0.00 0.00 0.00 4.44
402 1039 3.257127 AGAAAGAAGAGAGAGACAACCGG 59.743 47.826 0.00 0.00 0.00 5.28
403 1040 0.892063 AGAAGAGAGAGACAACCGGC 59.108 55.000 0.00 0.00 0.00 6.13
404 1041 0.892063 GAAGAGAGAGACAACCGGCT 59.108 55.000 0.00 0.00 0.00 5.52
405 1042 2.093106 GAAGAGAGAGACAACCGGCTA 58.907 52.381 0.00 0.00 0.00 3.93
406 1043 2.217510 AGAGAGAGACAACCGGCTAA 57.782 50.000 0.00 0.00 0.00 3.09
407 1044 2.741145 AGAGAGAGACAACCGGCTAAT 58.259 47.619 0.00 0.00 0.00 1.73
408 1045 2.691011 AGAGAGAGACAACCGGCTAATC 59.309 50.000 0.00 0.00 0.00 1.75
409 1046 1.405821 AGAGAGACAACCGGCTAATCG 59.594 52.381 0.00 0.00 0.00 3.34
418 1055 3.498676 CGGCTAATCGGATCCACTC 57.501 57.895 13.41 0.00 0.00 3.51
419 1056 0.673985 CGGCTAATCGGATCCACTCA 59.326 55.000 13.41 0.00 0.00 3.41
420 1057 1.068588 CGGCTAATCGGATCCACTCAA 59.931 52.381 13.41 0.00 0.00 3.02
421 1058 2.483013 CGGCTAATCGGATCCACTCAAA 60.483 50.000 13.41 0.00 0.00 2.69
422 1059 3.134458 GGCTAATCGGATCCACTCAAAG 58.866 50.000 13.41 2.17 0.00 2.77
423 1060 3.432326 GGCTAATCGGATCCACTCAAAGT 60.432 47.826 13.41 0.00 0.00 2.66
424 1061 4.192317 GCTAATCGGATCCACTCAAAGTT 58.808 43.478 13.41 0.00 0.00 2.66
425 1062 4.636206 GCTAATCGGATCCACTCAAAGTTT 59.364 41.667 13.41 0.00 0.00 2.66
426 1063 5.123979 GCTAATCGGATCCACTCAAAGTTTT 59.876 40.000 13.41 0.00 0.00 2.43
427 1064 6.349363 GCTAATCGGATCCACTCAAAGTTTTT 60.349 38.462 13.41 0.00 0.00 1.94
445 1082 1.999648 TTTTTGCCCTGTCAGCATCT 58.000 45.000 0.00 0.00 40.59 2.90
446 1083 2.877097 TTTTGCCCTGTCAGCATCTA 57.123 45.000 0.00 0.00 40.59 1.98
447 1084 2.877097 TTTGCCCTGTCAGCATCTAA 57.123 45.000 0.00 0.00 40.59 2.10
448 1085 3.370840 TTTGCCCTGTCAGCATCTAAT 57.629 42.857 0.00 0.00 40.59 1.73
449 1086 2.627515 TGCCCTGTCAGCATCTAATC 57.372 50.000 0.00 0.00 34.69 1.75
450 1087 1.839354 TGCCCTGTCAGCATCTAATCA 59.161 47.619 0.00 0.00 34.69 2.57
451 1088 2.239402 TGCCCTGTCAGCATCTAATCAA 59.761 45.455 0.00 0.00 34.69 2.57
452 1089 2.615912 GCCCTGTCAGCATCTAATCAAC 59.384 50.000 0.00 0.00 0.00 3.18
453 1090 3.877559 CCCTGTCAGCATCTAATCAACA 58.122 45.455 0.00 0.00 0.00 3.33
454 1091 4.458397 CCCTGTCAGCATCTAATCAACAT 58.542 43.478 0.00 0.00 0.00 2.71
455 1092 4.514441 CCCTGTCAGCATCTAATCAACATC 59.486 45.833 0.00 0.00 0.00 3.06
456 1093 5.121105 CCTGTCAGCATCTAATCAACATCA 58.879 41.667 0.00 0.00 0.00 3.07
457 1094 5.236695 CCTGTCAGCATCTAATCAACATCAG 59.763 44.000 0.00 0.00 0.00 2.90
458 1095 5.121105 TGTCAGCATCTAATCAACATCAGG 58.879 41.667 0.00 0.00 0.00 3.86
459 1096 4.514441 GTCAGCATCTAATCAACATCAGGG 59.486 45.833 0.00 0.00 0.00 4.45
460 1097 3.819337 CAGCATCTAATCAACATCAGGGG 59.181 47.826 0.00 0.00 0.00 4.79
461 1098 3.718434 AGCATCTAATCAACATCAGGGGA 59.282 43.478 0.00 0.00 0.00 4.81
462 1099 4.070716 GCATCTAATCAACATCAGGGGAG 58.929 47.826 0.00 0.00 0.00 4.30
463 1100 4.202398 GCATCTAATCAACATCAGGGGAGA 60.202 45.833 0.00 0.00 0.00 3.71
464 1101 5.303971 CATCTAATCAACATCAGGGGAGAC 58.696 45.833 0.00 0.00 0.00 3.36
465 1102 4.361783 TCTAATCAACATCAGGGGAGACA 58.638 43.478 0.00 0.00 0.00 3.41
466 1103 4.782691 TCTAATCAACATCAGGGGAGACAA 59.217 41.667 0.00 0.00 0.00 3.18
467 1104 4.387026 AATCAACATCAGGGGAGACAAA 57.613 40.909 0.00 0.00 0.00 2.83
468 1105 3.874383 TCAACATCAGGGGAGACAAAA 57.126 42.857 0.00 0.00 0.00 2.44
469 1106 3.486383 TCAACATCAGGGGAGACAAAAC 58.514 45.455 0.00 0.00 0.00 2.43
470 1107 2.558359 CAACATCAGGGGAGACAAAACC 59.442 50.000 0.00 0.00 0.00 3.27
471 1108 1.271379 ACATCAGGGGAGACAAAACCG 60.271 52.381 0.00 0.00 0.00 4.44
472 1109 0.322546 ATCAGGGGAGACAAAACCGC 60.323 55.000 0.00 0.00 39.01 5.68
473 1110 3.576232 AGGGGAGACAAAACCGCT 58.424 55.556 0.00 0.00 43.02 5.52
474 1111 0.955919 CAGGGGAGACAAAACCGCTC 60.956 60.000 0.00 0.00 45.35 5.03
475 1112 1.072505 GGGGAGACAAAACCGCTCA 59.927 57.895 0.00 0.00 36.42 4.26
476 1113 0.536460 GGGGAGACAAAACCGCTCAA 60.536 55.000 0.00 0.00 36.42 3.02
477 1114 0.875059 GGGAGACAAAACCGCTCAAG 59.125 55.000 0.00 0.00 0.00 3.02
478 1115 1.542547 GGGAGACAAAACCGCTCAAGA 60.543 52.381 0.00 0.00 0.00 3.02
479 1116 2.427506 GGAGACAAAACCGCTCAAGAT 58.572 47.619 0.00 0.00 0.00 2.40
480 1117 2.814336 GGAGACAAAACCGCTCAAGATT 59.186 45.455 0.00 0.00 0.00 2.40
481 1118 3.253432 GGAGACAAAACCGCTCAAGATTT 59.747 43.478 0.00 0.00 0.00 2.17
482 1119 4.222114 GAGACAAAACCGCTCAAGATTTG 58.778 43.478 0.00 0.00 37.10 2.32
483 1120 3.882888 AGACAAAACCGCTCAAGATTTGA 59.117 39.130 3.81 0.00 35.52 2.69
484 1121 4.520492 AGACAAAACCGCTCAAGATTTGAT 59.480 37.500 3.81 0.00 39.30 2.57
485 1122 5.010012 AGACAAAACCGCTCAAGATTTGATT 59.990 36.000 3.81 0.00 39.30 2.57
486 1123 4.984161 ACAAAACCGCTCAAGATTTGATTG 59.016 37.500 3.81 0.00 39.30 2.67
487 1124 5.221224 ACAAAACCGCTCAAGATTTGATTGA 60.221 36.000 3.81 0.00 39.30 2.57
488 1125 5.452078 AAACCGCTCAAGATTTGATTGAA 57.548 34.783 0.00 0.00 39.30 2.69
489 1126 5.452078 AACCGCTCAAGATTTGATTGAAA 57.548 34.783 0.00 0.00 39.30 2.69
490 1127 4.798574 ACCGCTCAAGATTTGATTGAAAC 58.201 39.130 0.00 0.00 39.30 2.78
491 1128 4.168760 CCGCTCAAGATTTGATTGAAACC 58.831 43.478 0.00 0.00 39.30 3.27
492 1129 4.321156 CCGCTCAAGATTTGATTGAAACCA 60.321 41.667 0.00 0.00 39.30 3.67
493 1130 4.618489 CGCTCAAGATTTGATTGAAACCAC 59.382 41.667 0.00 0.00 39.30 4.16
494 1131 5.563475 CGCTCAAGATTTGATTGAAACCACT 60.563 40.000 0.00 0.00 39.30 4.00
495 1132 6.348458 CGCTCAAGATTTGATTGAAACCACTA 60.348 38.462 0.00 0.00 39.30 2.74
496 1133 7.370383 GCTCAAGATTTGATTGAAACCACTAA 58.630 34.615 0.00 0.00 39.30 2.24
497 1134 7.867403 GCTCAAGATTTGATTGAAACCACTAAA 59.133 33.333 0.00 0.00 39.30 1.85
498 1135 9.403110 CTCAAGATTTGATTGAAACCACTAAAG 57.597 33.333 0.00 0.00 39.30 1.85
499 1136 8.359642 TCAAGATTTGATTGAAACCACTAAAGG 58.640 33.333 0.00 0.00 33.85 3.11
500 1137 7.232118 AGATTTGATTGAAACCACTAAAGGG 57.768 36.000 0.00 0.00 0.00 3.95
501 1138 6.782494 AGATTTGATTGAAACCACTAAAGGGT 59.218 34.615 0.00 0.00 41.41 4.34
502 1139 5.782893 TTGATTGAAACCACTAAAGGGTG 57.217 39.130 0.00 0.00 39.01 4.61
503 1140 4.798882 TGATTGAAACCACTAAAGGGTGT 58.201 39.130 0.00 0.00 39.01 4.16
504 1141 5.205056 TGATTGAAACCACTAAAGGGTGTT 58.795 37.500 0.00 0.00 39.01 3.32
505 1142 6.366340 TGATTGAAACCACTAAAGGGTGTTA 58.634 36.000 0.00 0.00 39.01 2.41
506 1143 7.007723 TGATTGAAACCACTAAAGGGTGTTAT 58.992 34.615 0.00 0.00 39.01 1.89
507 1144 7.507616 TGATTGAAACCACTAAAGGGTGTTATT 59.492 33.333 0.00 0.00 39.01 1.40
508 1145 8.943594 ATTGAAACCACTAAAGGGTGTTATTA 57.056 30.769 0.00 0.00 39.01 0.98
509 1146 8.763984 TTGAAACCACTAAAGGGTGTTATTAA 57.236 30.769 0.00 0.00 39.01 1.40
510 1147 8.168790 TGAAACCACTAAAGGGTGTTATTAAC 57.831 34.615 0.00 0.00 39.01 2.01
511 1148 7.231115 TGAAACCACTAAAGGGTGTTATTAACC 59.769 37.037 4.17 0.00 39.01 2.85
523 1160 7.680442 GGTGTTATTAACCCGGTTTTAGTAA 57.320 36.000 8.44 2.54 0.00 2.24
524 1161 8.279970 GGTGTTATTAACCCGGTTTTAGTAAT 57.720 34.615 8.44 4.40 0.00 1.89
525 1162 8.739039 GGTGTTATTAACCCGGTTTTAGTAATT 58.261 33.333 8.44 0.00 0.00 1.40
530 1167 5.970317 AACCCGGTTTTAGTAATTTGAGG 57.030 39.130 0.00 0.00 0.00 3.86
531 1168 4.338012 ACCCGGTTTTAGTAATTTGAGGG 58.662 43.478 0.00 8.52 40.79 4.30
532 1169 4.202599 ACCCGGTTTTAGTAATTTGAGGGT 60.203 41.667 0.00 9.47 42.95 4.34
533 1170 4.157105 CCCGGTTTTAGTAATTTGAGGGTG 59.843 45.833 0.00 0.00 0.00 4.61
534 1171 4.763279 CCGGTTTTAGTAATTTGAGGGTGT 59.237 41.667 0.00 0.00 0.00 4.16
535 1172 5.335348 CCGGTTTTAGTAATTTGAGGGTGTG 60.335 44.000 0.00 0.00 0.00 3.82
536 1173 5.470777 CGGTTTTAGTAATTTGAGGGTGTGA 59.529 40.000 0.00 0.00 0.00 3.58
537 1174 6.150474 CGGTTTTAGTAATTTGAGGGTGTGAT 59.850 38.462 0.00 0.00 0.00 3.06
538 1175 7.308951 CGGTTTTAGTAATTTGAGGGTGTGATT 60.309 37.037 0.00 0.00 0.00 2.57
539 1176 7.812669 GGTTTTAGTAATTTGAGGGTGTGATTG 59.187 37.037 0.00 0.00 0.00 2.67
540 1177 8.357402 GTTTTAGTAATTTGAGGGTGTGATTGT 58.643 33.333 0.00 0.00 0.00 2.71
541 1178 8.472007 TTTAGTAATTTGAGGGTGTGATTGTT 57.528 30.769 0.00 0.00 0.00 2.83
542 1179 6.976934 AGTAATTTGAGGGTGTGATTGTTT 57.023 33.333 0.00 0.00 0.00 2.83
543 1180 6.981722 AGTAATTTGAGGGTGTGATTGTTTC 58.018 36.000 0.00 0.00 0.00 2.78
544 1181 3.980646 TTTGAGGGTGTGATTGTTTCG 57.019 42.857 0.00 0.00 0.00 3.46
545 1182 1.890876 TGAGGGTGTGATTGTTTCGG 58.109 50.000 0.00 0.00 0.00 4.30
546 1183 1.142060 TGAGGGTGTGATTGTTTCGGT 59.858 47.619 0.00 0.00 0.00 4.69
547 1184 2.227194 GAGGGTGTGATTGTTTCGGTT 58.773 47.619 0.00 0.00 0.00 4.44
548 1185 2.621526 GAGGGTGTGATTGTTTCGGTTT 59.378 45.455 0.00 0.00 0.00 3.27
549 1186 3.028130 AGGGTGTGATTGTTTCGGTTTT 58.972 40.909 0.00 0.00 0.00 2.43
550 1187 3.120041 GGGTGTGATTGTTTCGGTTTTG 58.880 45.455 0.00 0.00 0.00 2.44
551 1188 3.181485 GGGTGTGATTGTTTCGGTTTTGA 60.181 43.478 0.00 0.00 0.00 2.69
552 1189 4.041723 GGTGTGATTGTTTCGGTTTTGAG 58.958 43.478 0.00 0.00 0.00 3.02
553 1190 3.485743 GTGTGATTGTTTCGGTTTTGAGC 59.514 43.478 0.00 0.00 0.00 4.26
554 1191 3.380004 TGTGATTGTTTCGGTTTTGAGCT 59.620 39.130 0.00 0.00 0.00 4.09
555 1192 3.975035 GTGATTGTTTCGGTTTTGAGCTC 59.025 43.478 6.82 6.82 0.00 4.09
556 1193 3.629855 TGATTGTTTCGGTTTTGAGCTCA 59.370 39.130 13.74 13.74 0.00 4.26
557 1194 3.691049 TTGTTTCGGTTTTGAGCTCAG 57.309 42.857 17.43 4.96 0.00 3.35
558 1195 1.946768 TGTTTCGGTTTTGAGCTCAGG 59.053 47.619 17.43 5.58 0.00 3.86
559 1196 1.266989 GTTTCGGTTTTGAGCTCAGGG 59.733 52.381 17.43 5.93 0.00 4.45
560 1197 0.250727 TTCGGTTTTGAGCTCAGGGG 60.251 55.000 17.43 6.28 0.00 4.79
561 1198 1.675641 CGGTTTTGAGCTCAGGGGG 60.676 63.158 17.43 3.13 0.00 5.40
582 1219 6.903340 GGGGTATGTATCCCAAATATACCT 57.097 41.667 3.40 0.00 46.40 3.08
583 1220 6.659824 GGGGTATGTATCCCAAATATACCTG 58.340 44.000 3.40 0.00 46.40 4.00
584 1221 6.353602 GGGGTATGTATCCCAAATATACCTGG 60.354 46.154 3.40 0.00 46.40 4.45
585 1222 6.120220 GGTATGTATCCCAAATATACCTGGC 58.880 44.000 0.00 0.00 39.91 4.85
586 1223 4.650972 TGTATCCCAAATATACCTGGCC 57.349 45.455 0.00 0.00 0.00 5.36
587 1224 3.984090 TGTATCCCAAATATACCTGGCCA 59.016 43.478 4.71 4.71 0.00 5.36
588 1225 4.605813 TGTATCCCAAATATACCTGGCCAT 59.394 41.667 5.51 0.00 0.00 4.40
589 1226 3.524095 TCCCAAATATACCTGGCCATG 57.476 47.619 5.51 6.06 0.00 3.66
590 1227 2.109834 TCCCAAATATACCTGGCCATGG 59.890 50.000 5.51 13.05 0.00 3.66
591 1228 2.528564 CCAAATATACCTGGCCATGGG 58.471 52.381 20.97 16.10 0.00 4.00
592 1229 2.109834 CCAAATATACCTGGCCATGGGA 59.890 50.000 17.65 12.89 0.00 4.37
593 1230 3.437784 CCAAATATACCTGGCCATGGGAA 60.438 47.826 17.65 9.02 0.00 3.97
594 1231 3.814504 AATATACCTGGCCATGGGAAG 57.185 47.619 17.65 0.00 0.00 3.46
595 1232 0.771127 TATACCTGGCCATGGGAAGC 59.229 55.000 17.65 0.00 0.00 3.86
652 1289 1.406898 GCTTGGGCCTAGATTTTGAGC 59.593 52.381 19.48 0.00 0.00 4.26
653 1290 2.027385 CTTGGGCCTAGATTTTGAGCC 58.973 52.381 9.57 0.00 43.09 4.70
655 1292 2.707902 GGCCTAGATTTTGAGCCCG 58.292 57.895 0.00 0.00 37.66 6.13
656 1293 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.000 0.00 0.00 37.66 5.14
657 1294 1.408266 GGCCTAGATTTTGAGCCCGAA 60.408 52.381 0.00 0.00 37.66 4.30
658 1295 1.943340 GCCTAGATTTTGAGCCCGAAG 59.057 52.381 0.00 0.00 0.00 3.79
680 1317 4.994471 GGTCGGGCCCGTCGTTTT 62.994 66.667 41.57 0.00 40.74 2.43
681 1318 2.974148 GTCGGGCCCGTCGTTTTT 60.974 61.111 41.57 0.00 40.74 1.94
682 1319 2.973600 TCGGGCCCGTCGTTTTTG 60.974 61.111 41.57 12.90 40.74 2.44
683 1320 4.693525 CGGGCCCGTCGTTTTTGC 62.694 66.667 36.64 0.00 34.35 3.68
684 1321 4.693525 GGGCCCGTCGTTTTTGCG 62.694 66.667 5.69 0.00 0.00 4.85
685 1322 3.956317 GGCCCGTCGTTTTTGCGT 61.956 61.111 0.00 0.00 0.00 5.24
686 1323 2.025013 GCCCGTCGTTTTTGCGTT 59.975 55.556 0.00 0.00 0.00 4.84
687 1324 1.586826 GCCCGTCGTTTTTGCGTTT 60.587 52.632 0.00 0.00 0.00 3.60
688 1325 1.140999 GCCCGTCGTTTTTGCGTTTT 61.141 50.000 0.00 0.00 0.00 2.43
689 1326 1.270068 CCCGTCGTTTTTGCGTTTTT 58.730 45.000 0.00 0.00 0.00 1.94
690 1327 1.253289 CCCGTCGTTTTTGCGTTTTTC 59.747 47.619 0.00 0.00 0.00 2.29
691 1328 2.178783 CCGTCGTTTTTGCGTTTTTCT 58.821 42.857 0.00 0.00 0.00 2.52
692 1329 3.352652 CCGTCGTTTTTGCGTTTTTCTA 58.647 40.909 0.00 0.00 0.00 2.10
693 1330 3.784994 CCGTCGTTTTTGCGTTTTTCTAA 59.215 39.130 0.00 0.00 0.00 2.10
694 1331 4.262510 CCGTCGTTTTTGCGTTTTTCTAAA 59.737 37.500 0.00 0.00 0.00 1.85
695 1332 5.400549 CGTCGTTTTTGCGTTTTTCTAAAG 58.599 37.500 0.00 0.00 0.00 1.85
696 1333 5.551187 CGTCGTTTTTGCGTTTTTCTAAAGG 60.551 40.000 0.00 0.00 33.41 3.11
697 1334 5.286797 GTCGTTTTTGCGTTTTTCTAAAGGT 59.713 36.000 0.00 0.00 32.96 3.50
698 1335 5.512434 TCGTTTTTGCGTTTTTCTAAAGGTC 59.488 36.000 0.00 0.00 32.96 3.85
699 1336 5.551187 CGTTTTTGCGTTTTTCTAAAGGTCG 60.551 40.000 0.00 0.00 32.96 4.79
700 1337 3.612472 TTGCGTTTTTCTAAAGGTCGG 57.388 42.857 0.00 0.00 32.96 4.79
701 1338 1.874872 TGCGTTTTTCTAAAGGTCGGG 59.125 47.619 0.00 0.00 32.96 5.14
702 1339 1.400629 GCGTTTTTCTAAAGGTCGGGC 60.401 52.381 0.00 0.00 32.96 6.13
703 1340 1.198408 CGTTTTTCTAAAGGTCGGGCC 59.802 52.381 0.00 0.00 37.58 5.80
704 1341 1.198408 GTTTTTCTAAAGGTCGGGCCG 59.802 52.381 22.51 22.51 43.70 6.13
705 1342 0.321830 TTTTCTAAAGGTCGGGCCGG 60.322 55.000 27.98 8.04 43.70 6.13
706 1343 2.187896 TTTCTAAAGGTCGGGCCGGG 62.188 60.000 27.98 7.82 43.70 5.73
707 1344 3.396570 CTAAAGGTCGGGCCGGGT 61.397 66.667 27.98 8.04 43.70 5.28
708 1345 3.381333 CTAAAGGTCGGGCCGGGTC 62.381 68.421 27.98 16.32 43.70 4.46
735 1372 3.493440 CCCGACGGGCTTTTACGC 61.493 66.667 22.37 0.00 35.35 4.42
740 1377 2.095096 CGGGCTTTTACGCGTTCG 59.905 61.111 20.78 4.61 40.69 3.95
741 1378 2.477396 GGGCTTTTACGCGTTCGG 59.523 61.111 20.78 6.96 40.69 4.30
742 1379 2.477396 GGCTTTTACGCGTTCGGG 59.523 61.111 20.78 7.36 40.69 5.14
743 1380 2.202260 GCTTTTACGCGTTCGGGC 60.202 61.111 20.78 14.00 40.69 6.13
744 1381 2.477396 CTTTTACGCGTTCGGGCC 59.523 61.111 20.78 0.00 40.69 5.80
745 1382 3.357276 CTTTTACGCGTTCGGGCCG 62.357 63.158 22.51 22.51 40.69 6.13
764 1401 3.758172 GCTCGGGCCAAGAAAACA 58.242 55.556 4.39 0.00 0.00 2.83
765 1402 1.581447 GCTCGGGCCAAGAAAACAG 59.419 57.895 4.39 0.00 0.00 3.16
766 1403 1.866853 GCTCGGGCCAAGAAAACAGG 61.867 60.000 4.39 0.00 0.00 4.00
770 1407 2.650778 GCCAAGAAAACAGGCCCG 59.349 61.111 0.00 0.00 42.58 6.13
771 1408 1.901464 GCCAAGAAAACAGGCCCGA 60.901 57.895 0.00 0.00 42.58 5.14
772 1409 1.250840 GCCAAGAAAACAGGCCCGAT 61.251 55.000 0.00 0.00 42.58 4.18
773 1410 0.527565 CCAAGAAAACAGGCCCGATG 59.472 55.000 0.00 0.00 0.00 3.84
774 1411 0.527565 CAAGAAAACAGGCCCGATGG 59.472 55.000 0.00 0.00 0.00 3.51
804 1441 3.647771 GGGCTCGGACCTGGGTTT 61.648 66.667 0.00 0.00 0.00 3.27
805 1442 2.434774 GGCTCGGACCTGGGTTTT 59.565 61.111 0.00 0.00 0.00 2.43
806 1443 1.228459 GGCTCGGACCTGGGTTTTT 60.228 57.895 0.00 0.00 0.00 1.94
820 1457 2.725008 TTTTTGCGTCGGGCTTGG 59.275 55.556 0.00 0.00 44.05 3.61
821 1458 3.492311 TTTTTGCGTCGGGCTTGGC 62.492 57.895 0.00 0.00 44.05 4.52
822 1459 4.947147 TTTGCGTCGGGCTTGGCT 62.947 61.111 0.00 0.00 44.05 4.75
823 1460 3.538785 TTTGCGTCGGGCTTGGCTA 62.539 57.895 0.00 0.00 44.05 3.93
824 1461 3.950794 TTGCGTCGGGCTTGGCTAG 62.951 63.158 0.00 0.00 44.05 3.42
841 1478 4.929707 GGCCGGGCCCGAGTTATG 62.930 72.222 45.44 27.62 44.06 1.90
842 1479 4.929707 GCCGGGCCCGAGTTATGG 62.930 72.222 45.44 26.84 42.83 2.74
847 1484 2.203209 GCCCGAGTTATGGCCAGG 60.203 66.667 13.05 6.01 41.97 4.45
848 1485 3.043999 GCCCGAGTTATGGCCAGGT 62.044 63.158 13.05 0.00 41.97 4.00
849 1486 1.692173 GCCCGAGTTATGGCCAGGTA 61.692 60.000 13.05 0.00 41.97 3.08
850 1487 1.056660 CCCGAGTTATGGCCAGGTAT 58.943 55.000 13.05 0.00 0.00 2.73
851 1488 2.253610 CCCGAGTTATGGCCAGGTATA 58.746 52.381 13.05 0.00 0.00 1.47
852 1489 2.635915 CCCGAGTTATGGCCAGGTATAA 59.364 50.000 13.05 1.28 0.00 0.98
853 1490 3.263425 CCCGAGTTATGGCCAGGTATAAT 59.737 47.826 13.05 0.00 0.00 1.28
854 1491 4.504858 CCGAGTTATGGCCAGGTATAATC 58.495 47.826 13.05 2.26 0.00 1.75
855 1492 4.504858 CGAGTTATGGCCAGGTATAATCC 58.495 47.826 13.05 0.53 0.00 3.01
856 1493 4.623171 CGAGTTATGGCCAGGTATAATCCC 60.623 50.000 13.05 0.00 0.00 3.85
857 1494 4.247814 AGTTATGGCCAGGTATAATCCCA 58.752 43.478 13.05 0.00 0.00 4.37
858 1495 4.667858 AGTTATGGCCAGGTATAATCCCAA 59.332 41.667 13.05 0.00 0.00 4.12
859 1496 5.315914 AGTTATGGCCAGGTATAATCCCAAT 59.684 40.000 13.05 0.00 0.00 3.16
860 1497 3.524095 TGGCCAGGTATAATCCCAATG 57.476 47.619 0.00 0.00 0.00 2.82
861 1498 2.109834 TGGCCAGGTATAATCCCAATGG 59.890 50.000 0.00 0.00 0.00 3.16
877 1514 3.876341 CAATGGATTTGGGGGTGATTTG 58.124 45.455 0.00 0.00 0.00 2.32
878 1515 2.711895 TGGATTTGGGGGTGATTTGT 57.288 45.000 0.00 0.00 0.00 2.83
879 1516 3.835478 TGGATTTGGGGGTGATTTGTA 57.165 42.857 0.00 0.00 0.00 2.41
880 1517 4.344938 TGGATTTGGGGGTGATTTGTAT 57.655 40.909 0.00 0.00 0.00 2.29
881 1518 5.473849 TGGATTTGGGGGTGATTTGTATA 57.526 39.130 0.00 0.00 0.00 1.47
882 1519 5.205056 TGGATTTGGGGGTGATTTGTATAC 58.795 41.667 0.00 0.00 0.00 1.47
883 1520 5.043732 TGGATTTGGGGGTGATTTGTATACT 60.044 40.000 4.17 0.00 0.00 2.12
884 1521 5.897250 GGATTTGGGGGTGATTTGTATACTT 59.103 40.000 4.17 0.00 0.00 2.24
885 1522 6.040504 GGATTTGGGGGTGATTTGTATACTTC 59.959 42.308 4.17 0.00 0.00 3.01
886 1523 5.789574 TTGGGGGTGATTTGTATACTTCT 57.210 39.130 4.17 0.00 0.00 2.85
903 1540 4.720046 ACTTCTTTCTTTTCACTCCCCTC 58.280 43.478 0.00 0.00 0.00 4.30
908 1545 1.132527 TCTTTTCACTCCCCTCCCTCA 60.133 52.381 0.00 0.00 0.00 3.86
911 1548 0.687757 TTCACTCCCCTCCCTCATCG 60.688 60.000 0.00 0.00 0.00 3.84
916 1553 2.506061 CCCCTCCCTCATCGCTCTG 61.506 68.421 0.00 0.00 0.00 3.35
920 1557 1.380380 TCCCTCATCGCTCTGCTCA 60.380 57.895 0.00 0.00 0.00 4.26
921 1558 0.972471 TCCCTCATCGCTCTGCTCAA 60.972 55.000 0.00 0.00 0.00 3.02
924 1561 2.286872 CCTCATCGCTCTGCTCAAAAT 58.713 47.619 0.00 0.00 0.00 1.82
929 1568 5.631026 TCATCGCTCTGCTCAAAATAAAAC 58.369 37.500 0.00 0.00 0.00 2.43
932 1571 5.826586 TCGCTCTGCTCAAAATAAAACAAA 58.173 33.333 0.00 0.00 0.00 2.83
934 1573 6.922957 TCGCTCTGCTCAAAATAAAACAAAAT 59.077 30.769 0.00 0.00 0.00 1.82
952 1591 3.602205 AATAAAATCCCCTGCCTCCTC 57.398 47.619 0.00 0.00 0.00 3.71
954 1593 2.558380 AAAATCCCCTGCCTCCTCGC 62.558 60.000 0.00 0.00 0.00 5.03
1078 1726 3.479370 GGTACGCAGAGCAGCAAG 58.521 61.111 0.00 0.00 0.00 4.01
1452 2112 1.152567 CACCTTCCTGCCCAACCAA 60.153 57.895 0.00 0.00 0.00 3.67
1579 2242 1.296715 ACCGAGAAGTGGGTCATGC 59.703 57.895 0.00 0.00 25.31 4.06
1973 2811 3.942439 GATACTCGGGGCCCCTGC 61.942 72.222 38.17 16.51 0.00 4.85
1992 2830 5.340803 CCTGCTGATCAGTTTGATGATTTG 58.659 41.667 23.38 0.00 40.02 2.32
2232 3075 3.721035 GGAATGCAACTTGCTGTTCTTT 58.279 40.909 21.34 7.11 45.31 2.52
2383 3227 9.791820 CATTGCACATTTGACATTAATAGAGAA 57.208 29.630 0.00 0.00 0.00 2.87
2546 3394 4.640647 GTGGTTCAGTATGGAGGGAATTTC 59.359 45.833 0.00 0.00 36.16 2.17
2555 3403 7.941238 CAGTATGGAGGGAATTTCACTGATTAT 59.059 37.037 5.75 0.00 35.32 1.28
2687 3552 8.592809 TGATCATTATTGGGCTTAAACTTTGTT 58.407 29.630 0.00 0.00 0.00 2.83
2699 3593 6.816640 GCTTAAACTTTGTTATCCAAATCCCC 59.183 38.462 0.00 0.00 42.02 4.81
2798 3699 3.969899 TGTCTGCTGACGATATGATGTC 58.030 45.455 17.59 0.00 45.70 3.06
2839 3740 5.403246 TGTTATGCGGCAAATCGTATTTTT 58.597 33.333 6.82 0.00 36.84 1.94
2866 3767 6.347696 TCTTCACTGCCAATGTTTTGAAAAT 58.652 32.000 0.00 0.00 34.60 1.82
2872 3773 9.008289 CACTGCCAATGTTTTGAAAATTAAAAC 57.992 29.630 7.73 7.73 44.31 2.43
2913 3814 8.783093 TCTGTTAGTGTAAAACTTGGATGAATG 58.217 33.333 0.00 0.00 40.56 2.67
2947 3848 5.248477 TCTTTGGATGCTAGTTACTTCTGGT 59.752 40.000 0.00 0.00 0.00 4.00
2977 3878 4.036027 CACATAGGAAATGTTGCTAGCAGG 59.964 45.833 18.45 0.00 37.01 4.85
2986 3887 1.863454 GTTGCTAGCAGGACATCATCG 59.137 52.381 18.45 0.00 0.00 3.84
2998 3899 2.246739 ATCATCGAACGCGCCATGG 61.247 57.895 7.63 7.63 37.46 3.66
3087 3989 6.713762 TGTTTGTGGATCTTGATCAGTTTT 57.286 33.333 12.02 0.00 0.00 2.43
3141 4047 3.441163 CGTGCGCCTTTCTATTGTAGTA 58.559 45.455 4.18 0.00 0.00 1.82
3142 4048 3.486108 CGTGCGCCTTTCTATTGTAGTAG 59.514 47.826 4.18 0.00 0.00 2.57
3143 4049 4.430908 GTGCGCCTTTCTATTGTAGTAGT 58.569 43.478 4.18 0.00 0.00 2.73
3156 4062 8.459635 TCTATTGTAGTAGTTGTGCTTCTAGTG 58.540 37.037 0.00 0.00 29.50 2.74
3177 4093 2.073056 CGGTACTTGTAATGCTGCACA 58.927 47.619 3.57 0.00 0.00 4.57
3317 4673 2.163613 CCCGAATTTGACCAAAGCTACC 59.836 50.000 0.00 0.00 33.32 3.18
3323 4679 6.423604 CGAATTTGACCAAAGCTACCAAAAAT 59.576 34.615 1.57 0.00 33.32 1.82
3324 4680 7.359181 CGAATTTGACCAAAGCTACCAAAAATC 60.359 37.037 1.57 0.00 33.32 2.17
3340 4696 8.690203 ACCAAAAATCCCCTTCTAAAATTTTG 57.310 30.769 13.76 4.15 36.67 2.44
3359 4715 6.935741 TTTTGTATACACAGTTGCTGAACT 57.064 33.333 4.68 0.00 43.63 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.373169 TCAGCCTCCTCACATGAAACTT 59.627 45.455 0.00 0.00 0.00 2.66
72 74 4.323409 GGAATGGGGTGTGCAAATTTATGT 60.323 41.667 0.00 0.00 0.00 2.29
177 786 1.893137 TGCTCCTCTGCTTCGTTTCTA 59.107 47.619 0.00 0.00 0.00 2.10
293 930 4.253257 CTAGGGCTCGGTCGTCGC 62.253 72.222 0.00 0.00 39.05 5.19
294 931 4.253257 GCTAGGGCTCGGTCGTCG 62.253 72.222 0.00 0.00 40.90 5.12
295 932 4.253257 CGCTAGGGCTCGGTCGTC 62.253 72.222 0.00 0.00 36.09 4.20
296 933 4.790962 TCGCTAGGGCTCGGTCGT 62.791 66.667 1.02 0.00 36.09 4.34
297 934 3.515286 TTCGCTAGGGCTCGGTCG 61.515 66.667 1.02 0.00 36.09 4.79
298 935 2.104530 GTTCGCTAGGGCTCGGTC 59.895 66.667 1.02 0.00 36.09 4.79
299 936 2.678934 TGTTCGCTAGGGCTCGGT 60.679 61.111 1.02 0.00 36.09 4.69
300 937 1.945354 TTCTGTTCGCTAGGGCTCGG 61.945 60.000 1.02 3.12 36.09 4.63
301 938 0.526524 CTTCTGTTCGCTAGGGCTCG 60.527 60.000 1.02 0.00 36.09 5.03
302 939 0.818296 TCTTCTGTTCGCTAGGGCTC 59.182 55.000 1.02 0.00 36.09 4.70
303 940 0.820871 CTCTTCTGTTCGCTAGGGCT 59.179 55.000 1.02 0.00 36.09 5.19
304 941 0.808060 GCTCTTCTGTTCGCTAGGGC 60.808 60.000 1.02 0.00 0.00 5.19
305 942 0.526524 CGCTCTTCTGTTCGCTAGGG 60.527 60.000 0.00 0.00 0.00 3.53
306 943 0.452184 TCGCTCTTCTGTTCGCTAGG 59.548 55.000 0.00 0.00 0.00 3.02
307 944 2.483583 ATCGCTCTTCTGTTCGCTAG 57.516 50.000 0.00 0.00 0.00 3.42
308 945 2.423892 AGAATCGCTCTTCTGTTCGCTA 59.576 45.455 0.00 0.00 34.22 4.26
309 946 1.203523 AGAATCGCTCTTCTGTTCGCT 59.796 47.619 0.00 0.00 34.22 4.93
310 947 1.322936 CAGAATCGCTCTTCTGTTCGC 59.677 52.381 13.95 0.00 44.60 4.70
316 953 0.463620 GCCTCCAGAATCGCTCTTCT 59.536 55.000 0.00 0.00 35.88 2.85
317 954 0.873743 CGCCTCCAGAATCGCTCTTC 60.874 60.000 0.00 0.00 29.07 2.87
318 955 1.142748 CGCCTCCAGAATCGCTCTT 59.857 57.895 0.00 0.00 29.07 2.85
319 956 1.733402 CTCGCCTCCAGAATCGCTCT 61.733 60.000 0.00 0.00 33.23 4.09
320 957 1.299773 CTCGCCTCCAGAATCGCTC 60.300 63.158 0.00 0.00 0.00 5.03
321 958 2.790791 CCTCGCCTCCAGAATCGCT 61.791 63.158 0.00 0.00 0.00 4.93
322 959 2.279784 CCTCGCCTCCAGAATCGC 60.280 66.667 0.00 0.00 0.00 4.58
323 960 2.419198 CCCTCGCCTCCAGAATCG 59.581 66.667 0.00 0.00 0.00 3.34
324 961 1.338136 TTCCCCTCGCCTCCAGAATC 61.338 60.000 0.00 0.00 0.00 2.52
325 962 0.914417 TTTCCCCTCGCCTCCAGAAT 60.914 55.000 0.00 0.00 0.00 2.40
326 963 1.131303 TTTTCCCCTCGCCTCCAGAA 61.131 55.000 0.00 0.00 0.00 3.02
327 964 1.131303 TTTTTCCCCTCGCCTCCAGA 61.131 55.000 0.00 0.00 0.00 3.86
328 965 0.678048 CTTTTTCCCCTCGCCTCCAG 60.678 60.000 0.00 0.00 0.00 3.86
329 966 1.378762 CTTTTTCCCCTCGCCTCCA 59.621 57.895 0.00 0.00 0.00 3.86
330 967 1.378646 CCTTTTTCCCCTCGCCTCC 60.379 63.158 0.00 0.00 0.00 4.30
331 968 0.037734 TTCCTTTTTCCCCTCGCCTC 59.962 55.000 0.00 0.00 0.00 4.70
332 969 0.481128 TTTCCTTTTTCCCCTCGCCT 59.519 50.000 0.00 0.00 0.00 5.52
333 970 0.888619 CTTTCCTTTTTCCCCTCGCC 59.111 55.000 0.00 0.00 0.00 5.54
334 971 1.905637 TCTTTCCTTTTTCCCCTCGC 58.094 50.000 0.00 0.00 0.00 5.03
335 972 3.255888 CCTTTCTTTCCTTTTTCCCCTCG 59.744 47.826 0.00 0.00 0.00 4.63
336 973 4.480115 TCCTTTCTTTCCTTTTTCCCCTC 58.520 43.478 0.00 0.00 0.00 4.30
337 974 4.552883 TCCTTTCTTTCCTTTTTCCCCT 57.447 40.909 0.00 0.00 0.00 4.79
338 975 4.899457 TCTTCCTTTCTTTCCTTTTTCCCC 59.101 41.667 0.00 0.00 0.00 4.81
339 976 5.011125 CCTCTTCCTTTCTTTCCTTTTTCCC 59.989 44.000 0.00 0.00 0.00 3.97
340 977 5.011125 CCCTCTTCCTTTCTTTCCTTTTTCC 59.989 44.000 0.00 0.00 0.00 3.13
341 978 5.598830 ACCCTCTTCCTTTCTTTCCTTTTTC 59.401 40.000 0.00 0.00 0.00 2.29
342 979 5.363868 CACCCTCTTCCTTTCTTTCCTTTTT 59.636 40.000 0.00 0.00 0.00 1.94
343 980 4.895889 CACCCTCTTCCTTTCTTTCCTTTT 59.104 41.667 0.00 0.00 0.00 2.27
344 981 4.168088 TCACCCTCTTCCTTTCTTTCCTTT 59.832 41.667 0.00 0.00 0.00 3.11
345 982 3.722101 TCACCCTCTTCCTTTCTTTCCTT 59.278 43.478 0.00 0.00 0.00 3.36
346 983 3.327439 TCACCCTCTTCCTTTCTTTCCT 58.673 45.455 0.00 0.00 0.00 3.36
347 984 3.560239 CCTCACCCTCTTCCTTTCTTTCC 60.560 52.174 0.00 0.00 0.00 3.13
348 985 3.560239 CCCTCACCCTCTTCCTTTCTTTC 60.560 52.174 0.00 0.00 0.00 2.62
349 986 2.376855 CCCTCACCCTCTTCCTTTCTTT 59.623 50.000 0.00 0.00 0.00 2.52
350 987 1.988846 CCCTCACCCTCTTCCTTTCTT 59.011 52.381 0.00 0.00 0.00 2.52
351 988 1.662686 CCCTCACCCTCTTCCTTTCT 58.337 55.000 0.00 0.00 0.00 2.52
352 989 0.621082 CCCCTCACCCTCTTCCTTTC 59.379 60.000 0.00 0.00 0.00 2.62
353 990 0.196118 TCCCCTCACCCTCTTCCTTT 59.804 55.000 0.00 0.00 0.00 3.11
354 991 0.196118 TTCCCCTCACCCTCTTCCTT 59.804 55.000 0.00 0.00 0.00 3.36
355 992 0.196118 TTTCCCCTCACCCTCTTCCT 59.804 55.000 0.00 0.00 0.00 3.36
356 993 1.004862 CTTTTCCCCTCACCCTCTTCC 59.995 57.143 0.00 0.00 0.00 3.46
357 994 1.004862 CCTTTTCCCCTCACCCTCTTC 59.995 57.143 0.00 0.00 0.00 2.87
358 995 1.076438 CCTTTTCCCCTCACCCTCTT 58.924 55.000 0.00 0.00 0.00 2.85
359 996 0.196118 TCCTTTTCCCCTCACCCTCT 59.804 55.000 0.00 0.00 0.00 3.69
360 997 1.073098 TTCCTTTTCCCCTCACCCTC 58.927 55.000 0.00 0.00 0.00 4.30
361 998 1.429299 CTTTCCTTTTCCCCTCACCCT 59.571 52.381 0.00 0.00 0.00 4.34
362 999 1.427753 TCTTTCCTTTTCCCCTCACCC 59.572 52.381 0.00 0.00 0.00 4.61
363 1000 2.971901 TCTTTCCTTTTCCCCTCACC 57.028 50.000 0.00 0.00 0.00 4.02
364 1001 4.470602 TCTTTCTTTCCTTTTCCCCTCAC 58.529 43.478 0.00 0.00 0.00 3.51
365 1002 4.806952 TCTTTCTTTCCTTTTCCCCTCA 57.193 40.909 0.00 0.00 0.00 3.86
366 1003 5.386060 TCTTCTTTCTTTCCTTTTCCCCTC 58.614 41.667 0.00 0.00 0.00 4.30
367 1004 5.134509 TCTCTTCTTTCTTTCCTTTTCCCCT 59.865 40.000 0.00 0.00 0.00 4.79
368 1005 5.386060 TCTCTTCTTTCTTTCCTTTTCCCC 58.614 41.667 0.00 0.00 0.00 4.81
369 1006 6.299922 TCTCTCTTCTTTCTTTCCTTTTCCC 58.700 40.000 0.00 0.00 0.00 3.97
370 1007 7.172532 GTCTCTCTCTTCTTTCTTTCCTTTTCC 59.827 40.741 0.00 0.00 0.00 3.13
371 1008 7.713073 TGTCTCTCTCTTCTTTCTTTCCTTTTC 59.287 37.037 0.00 0.00 0.00 2.29
372 1009 7.569240 TGTCTCTCTCTTCTTTCTTTCCTTTT 58.431 34.615 0.00 0.00 0.00 2.27
373 1010 7.130681 TGTCTCTCTCTTCTTTCTTTCCTTT 57.869 36.000 0.00 0.00 0.00 3.11
374 1011 6.739331 TGTCTCTCTCTTCTTTCTTTCCTT 57.261 37.500 0.00 0.00 0.00 3.36
375 1012 6.463755 GGTTGTCTCTCTCTTCTTTCTTTCCT 60.464 42.308 0.00 0.00 0.00 3.36
376 1013 5.699001 GGTTGTCTCTCTCTTCTTTCTTTCC 59.301 44.000 0.00 0.00 0.00 3.13
377 1014 5.404066 CGGTTGTCTCTCTCTTCTTTCTTTC 59.596 44.000 0.00 0.00 0.00 2.62
378 1015 5.293560 CGGTTGTCTCTCTCTTCTTTCTTT 58.706 41.667 0.00 0.00 0.00 2.52
379 1016 4.262249 CCGGTTGTCTCTCTCTTCTTTCTT 60.262 45.833 0.00 0.00 0.00 2.52
380 1017 3.257127 CCGGTTGTCTCTCTCTTCTTTCT 59.743 47.826 0.00 0.00 0.00 2.52
381 1018 3.580731 CCGGTTGTCTCTCTCTTCTTTC 58.419 50.000 0.00 0.00 0.00 2.62
382 1019 2.289133 GCCGGTTGTCTCTCTCTTCTTT 60.289 50.000 1.90 0.00 0.00 2.52
383 1020 1.273886 GCCGGTTGTCTCTCTCTTCTT 59.726 52.381 1.90 0.00 0.00 2.52
384 1021 0.892063 GCCGGTTGTCTCTCTCTTCT 59.108 55.000 1.90 0.00 0.00 2.85
385 1022 0.892063 AGCCGGTTGTCTCTCTCTTC 59.108 55.000 1.90 0.00 0.00 2.87
386 1023 2.217510 TAGCCGGTTGTCTCTCTCTT 57.782 50.000 1.90 0.00 0.00 2.85
387 1024 2.217510 TTAGCCGGTTGTCTCTCTCT 57.782 50.000 1.90 0.00 0.00 3.10
388 1025 2.541999 CGATTAGCCGGTTGTCTCTCTC 60.542 54.545 1.90 0.00 0.00 3.20
389 1026 1.405821 CGATTAGCCGGTTGTCTCTCT 59.594 52.381 1.90 0.00 0.00 3.10
390 1027 1.536284 CCGATTAGCCGGTTGTCTCTC 60.536 57.143 1.90 0.00 44.23 3.20
391 1028 0.460311 CCGATTAGCCGGTTGTCTCT 59.540 55.000 1.90 0.00 44.23 3.10
392 1029 2.973420 CCGATTAGCCGGTTGTCTC 58.027 57.895 1.90 0.00 44.23 3.36
400 1037 0.673985 TGAGTGGATCCGATTAGCCG 59.326 55.000 7.39 0.00 0.00 5.52
401 1038 2.910688 TTGAGTGGATCCGATTAGCC 57.089 50.000 7.39 0.00 0.00 3.93
402 1039 3.798202 ACTTTGAGTGGATCCGATTAGC 58.202 45.455 7.39 0.00 0.00 3.09
403 1040 6.743575 AAAACTTTGAGTGGATCCGATTAG 57.256 37.500 7.39 2.30 0.00 1.73
426 1063 1.999648 AGATGCTGACAGGGCAAAAA 58.000 45.000 4.26 0.00 43.14 1.94
427 1064 2.877097 TAGATGCTGACAGGGCAAAA 57.123 45.000 4.26 0.00 43.14 2.44
428 1065 2.877097 TTAGATGCTGACAGGGCAAA 57.123 45.000 4.26 0.00 43.14 3.68
429 1066 2.239402 TGATTAGATGCTGACAGGGCAA 59.761 45.455 4.26 0.00 43.14 4.52
430 1067 1.839354 TGATTAGATGCTGACAGGGCA 59.161 47.619 4.26 0.00 44.05 5.36
431 1068 2.615912 GTTGATTAGATGCTGACAGGGC 59.384 50.000 4.26 0.00 0.00 5.19
432 1069 3.877559 TGTTGATTAGATGCTGACAGGG 58.122 45.455 4.26 0.00 0.00 4.45
433 1070 5.121105 TGATGTTGATTAGATGCTGACAGG 58.879 41.667 4.26 0.00 0.00 4.00
434 1071 5.236695 CCTGATGTTGATTAGATGCTGACAG 59.763 44.000 0.00 0.00 0.00 3.51
435 1072 5.121105 CCTGATGTTGATTAGATGCTGACA 58.879 41.667 0.00 0.00 0.00 3.58
436 1073 4.514441 CCCTGATGTTGATTAGATGCTGAC 59.486 45.833 0.00 0.00 0.00 3.51
437 1074 4.445305 CCCCTGATGTTGATTAGATGCTGA 60.445 45.833 0.00 0.00 0.00 4.26
438 1075 3.819337 CCCCTGATGTTGATTAGATGCTG 59.181 47.826 0.00 0.00 0.00 4.41
439 1076 3.718434 TCCCCTGATGTTGATTAGATGCT 59.282 43.478 0.00 0.00 0.00 3.79
440 1077 4.070716 CTCCCCTGATGTTGATTAGATGC 58.929 47.826 0.00 0.00 0.00 3.91
441 1078 5.163269 TGTCTCCCCTGATGTTGATTAGATG 60.163 44.000 0.00 0.00 0.00 2.90
442 1079 4.971282 TGTCTCCCCTGATGTTGATTAGAT 59.029 41.667 0.00 0.00 0.00 1.98
443 1080 4.361783 TGTCTCCCCTGATGTTGATTAGA 58.638 43.478 0.00 0.00 0.00 2.10
444 1081 4.760530 TGTCTCCCCTGATGTTGATTAG 57.239 45.455 0.00 0.00 0.00 1.73
445 1082 5.512942 TTTGTCTCCCCTGATGTTGATTA 57.487 39.130 0.00 0.00 0.00 1.75
446 1083 4.387026 TTTGTCTCCCCTGATGTTGATT 57.613 40.909 0.00 0.00 0.00 2.57
447 1084 4.082125 GTTTTGTCTCCCCTGATGTTGAT 58.918 43.478 0.00 0.00 0.00 2.57
448 1085 3.486383 GTTTTGTCTCCCCTGATGTTGA 58.514 45.455 0.00 0.00 0.00 3.18
449 1086 2.558359 GGTTTTGTCTCCCCTGATGTTG 59.442 50.000 0.00 0.00 0.00 3.33
450 1087 2.814097 CGGTTTTGTCTCCCCTGATGTT 60.814 50.000 0.00 0.00 0.00 2.71
451 1088 1.271379 CGGTTTTGTCTCCCCTGATGT 60.271 52.381 0.00 0.00 0.00 3.06
452 1089 1.453155 CGGTTTTGTCTCCCCTGATG 58.547 55.000 0.00 0.00 0.00 3.07
453 1090 0.322546 GCGGTTTTGTCTCCCCTGAT 60.323 55.000 0.00 0.00 0.00 2.90
454 1091 1.072505 GCGGTTTTGTCTCCCCTGA 59.927 57.895 0.00 0.00 0.00 3.86
455 1092 0.955919 GAGCGGTTTTGTCTCCCCTG 60.956 60.000 0.00 0.00 0.00 4.45
456 1093 1.375326 GAGCGGTTTTGTCTCCCCT 59.625 57.895 0.00 0.00 0.00 4.79
457 1094 0.536460 TTGAGCGGTTTTGTCTCCCC 60.536 55.000 0.00 0.00 0.00 4.81
458 1095 0.875059 CTTGAGCGGTTTTGTCTCCC 59.125 55.000 0.00 0.00 0.00 4.30
459 1096 1.878953 TCTTGAGCGGTTTTGTCTCC 58.121 50.000 0.00 0.00 0.00 3.71
460 1097 4.024048 TCAAATCTTGAGCGGTTTTGTCTC 60.024 41.667 8.16 0.00 34.08 3.36
461 1098 3.882888 TCAAATCTTGAGCGGTTTTGTCT 59.117 39.130 8.16 0.00 34.08 3.41
462 1099 4.223320 TCAAATCTTGAGCGGTTTTGTC 57.777 40.909 8.16 0.00 34.08 3.18
463 1100 4.853924 ATCAAATCTTGAGCGGTTTTGT 57.146 36.364 8.16 0.00 43.98 2.83
464 1101 5.221880 TCAATCAAATCTTGAGCGGTTTTG 58.778 37.500 3.00 3.00 43.98 2.44
465 1102 5.452078 TCAATCAAATCTTGAGCGGTTTT 57.548 34.783 0.00 0.00 43.98 2.43
466 1103 5.452078 TTCAATCAAATCTTGAGCGGTTT 57.548 34.783 0.00 0.00 43.98 3.27
467 1104 5.222631 GTTTCAATCAAATCTTGAGCGGTT 58.777 37.500 0.00 0.00 43.98 4.44
468 1105 4.321230 GGTTTCAATCAAATCTTGAGCGGT 60.321 41.667 0.00 0.00 43.98 5.68
469 1106 4.168760 GGTTTCAATCAAATCTTGAGCGG 58.831 43.478 0.00 0.00 43.98 5.52
470 1107 4.618489 GTGGTTTCAATCAAATCTTGAGCG 59.382 41.667 0.00 0.00 43.98 5.03
471 1108 5.776744 AGTGGTTTCAATCAAATCTTGAGC 58.223 37.500 0.00 0.00 43.98 4.26
472 1109 9.403110 CTTTAGTGGTTTCAATCAAATCTTGAG 57.597 33.333 0.00 0.00 43.98 3.02
473 1110 8.359642 CCTTTAGTGGTTTCAATCAAATCTTGA 58.640 33.333 0.00 0.00 45.01 3.02
474 1111 7.599998 CCCTTTAGTGGTTTCAATCAAATCTTG 59.400 37.037 0.00 0.00 0.00 3.02
475 1112 7.290014 ACCCTTTAGTGGTTTCAATCAAATCTT 59.710 33.333 0.00 0.00 29.75 2.40
476 1113 6.782494 ACCCTTTAGTGGTTTCAATCAAATCT 59.218 34.615 0.00 0.00 29.75 2.40
477 1114 6.868339 CACCCTTTAGTGGTTTCAATCAAATC 59.132 38.462 0.00 0.00 32.46 2.17
478 1115 6.326323 ACACCCTTTAGTGGTTTCAATCAAAT 59.674 34.615 0.00 0.00 42.28 2.32
479 1116 5.659079 ACACCCTTTAGTGGTTTCAATCAAA 59.341 36.000 0.00 0.00 42.28 2.69
480 1117 5.205056 ACACCCTTTAGTGGTTTCAATCAA 58.795 37.500 0.00 0.00 42.28 2.57
481 1118 4.798882 ACACCCTTTAGTGGTTTCAATCA 58.201 39.130 0.00 0.00 42.28 2.57
482 1119 5.784578 AACACCCTTTAGTGGTTTCAATC 57.215 39.130 0.00 0.00 42.28 2.67
483 1120 7.849322 AATAACACCCTTTAGTGGTTTCAAT 57.151 32.000 0.00 0.00 42.28 2.57
484 1121 8.631797 GTTAATAACACCCTTTAGTGGTTTCAA 58.368 33.333 0.00 0.00 42.28 2.69
485 1122 7.231115 GGTTAATAACACCCTTTAGTGGTTTCA 59.769 37.037 5.45 0.00 42.28 2.69
486 1123 7.596494 GGTTAATAACACCCTTTAGTGGTTTC 58.404 38.462 5.45 0.00 42.28 2.78
487 1124 7.528996 GGTTAATAACACCCTTTAGTGGTTT 57.471 36.000 5.45 0.00 42.28 3.27
499 1136 7.680442 TTACTAAAACCGGGTTAATAACACC 57.320 36.000 13.79 3.46 0.00 4.16
504 1141 9.176460 CCTCAAATTACTAAAACCGGGTTAATA 57.824 33.333 13.79 8.79 0.00 0.98
505 1142 7.123098 CCCTCAAATTACTAAAACCGGGTTAAT 59.877 37.037 13.79 5.95 0.00 1.40
506 1143 6.433716 CCCTCAAATTACTAAAACCGGGTTAA 59.566 38.462 13.79 3.56 0.00 2.01
507 1144 5.945191 CCCTCAAATTACTAAAACCGGGTTA 59.055 40.000 13.79 1.94 0.00 2.85
508 1145 4.768448 CCCTCAAATTACTAAAACCGGGTT 59.232 41.667 6.59 6.59 0.00 4.11
509 1146 4.202599 ACCCTCAAATTACTAAAACCGGGT 60.203 41.667 6.32 0.00 36.42 5.28
510 1147 4.157105 CACCCTCAAATTACTAAAACCGGG 59.843 45.833 6.32 0.00 0.00 5.73
511 1148 4.763279 ACACCCTCAAATTACTAAAACCGG 59.237 41.667 0.00 0.00 0.00 5.28
512 1149 5.470777 TCACACCCTCAAATTACTAAAACCG 59.529 40.000 0.00 0.00 0.00 4.44
513 1150 6.887626 TCACACCCTCAAATTACTAAAACC 57.112 37.500 0.00 0.00 0.00 3.27
514 1151 8.357402 ACAATCACACCCTCAAATTACTAAAAC 58.643 33.333 0.00 0.00 0.00 2.43
515 1152 8.472007 ACAATCACACCCTCAAATTACTAAAA 57.528 30.769 0.00 0.00 0.00 1.52
516 1153 8.472007 AACAATCACACCCTCAAATTACTAAA 57.528 30.769 0.00 0.00 0.00 1.85
517 1154 8.472007 AAACAATCACACCCTCAAATTACTAA 57.528 30.769 0.00 0.00 0.00 2.24
518 1155 7.094975 CGAAACAATCACACCCTCAAATTACTA 60.095 37.037 0.00 0.00 0.00 1.82
519 1156 6.293955 CGAAACAATCACACCCTCAAATTACT 60.294 38.462 0.00 0.00 0.00 2.24
520 1157 5.856455 CGAAACAATCACACCCTCAAATTAC 59.144 40.000 0.00 0.00 0.00 1.89
521 1158 5.048364 CCGAAACAATCACACCCTCAAATTA 60.048 40.000 0.00 0.00 0.00 1.40
522 1159 4.261994 CCGAAACAATCACACCCTCAAATT 60.262 41.667 0.00 0.00 0.00 1.82
523 1160 3.255642 CCGAAACAATCACACCCTCAAAT 59.744 43.478 0.00 0.00 0.00 2.32
524 1161 2.621055 CCGAAACAATCACACCCTCAAA 59.379 45.455 0.00 0.00 0.00 2.69
525 1162 2.226330 CCGAAACAATCACACCCTCAA 58.774 47.619 0.00 0.00 0.00 3.02
526 1163 1.142060 ACCGAAACAATCACACCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
527 1164 1.892209 ACCGAAACAATCACACCCTC 58.108 50.000 0.00 0.00 0.00 4.30
528 1165 2.358322 AACCGAAACAATCACACCCT 57.642 45.000 0.00 0.00 0.00 4.34
529 1166 3.120041 CAAAACCGAAACAATCACACCC 58.880 45.455 0.00 0.00 0.00 4.61
530 1167 4.035278 TCAAAACCGAAACAATCACACC 57.965 40.909 0.00 0.00 0.00 4.16
531 1168 3.485743 GCTCAAAACCGAAACAATCACAC 59.514 43.478 0.00 0.00 0.00 3.82
532 1169 3.380004 AGCTCAAAACCGAAACAATCACA 59.620 39.130 0.00 0.00 0.00 3.58
533 1170 3.964909 AGCTCAAAACCGAAACAATCAC 58.035 40.909 0.00 0.00 0.00 3.06
534 1171 3.629855 TGAGCTCAAAACCGAAACAATCA 59.370 39.130 15.67 0.00 0.00 2.57
535 1172 4.222114 CTGAGCTCAAAACCGAAACAATC 58.778 43.478 18.85 0.00 0.00 2.67
536 1173 3.004734 CCTGAGCTCAAAACCGAAACAAT 59.995 43.478 18.85 0.00 0.00 2.71
537 1174 2.357637 CCTGAGCTCAAAACCGAAACAA 59.642 45.455 18.85 0.00 0.00 2.83
538 1175 1.946768 CCTGAGCTCAAAACCGAAACA 59.053 47.619 18.85 0.00 0.00 2.83
539 1176 1.266989 CCCTGAGCTCAAAACCGAAAC 59.733 52.381 18.85 0.00 0.00 2.78
540 1177 1.604604 CCCTGAGCTCAAAACCGAAA 58.395 50.000 18.85 0.00 0.00 3.46
541 1178 0.250727 CCCCTGAGCTCAAAACCGAA 60.251 55.000 18.85 0.00 0.00 4.30
542 1179 1.374947 CCCCTGAGCTCAAAACCGA 59.625 57.895 18.85 0.00 0.00 4.69
543 1180 1.675641 CCCCCTGAGCTCAAAACCG 60.676 63.158 18.85 5.35 0.00 4.44
544 1181 4.423231 CCCCCTGAGCTCAAAACC 57.577 61.111 18.85 0.00 0.00 3.27
558 1195 5.734634 AGGTATATTTGGGATACATACCCCC 59.265 44.000 0.00 0.00 46.21 5.40
559 1196 6.353602 CCAGGTATATTTGGGATACATACCCC 60.354 46.154 0.00 0.00 46.21 4.95
560 1197 6.659824 CCAGGTATATTTGGGATACATACCC 58.340 44.000 5.64 0.00 46.87 3.69
561 1198 6.120220 GCCAGGTATATTTGGGATACATACC 58.880 44.000 7.38 0.00 40.88 2.73
562 1199 6.120220 GGCCAGGTATATTTGGGATACATAC 58.880 44.000 0.00 0.00 34.96 2.39
563 1200 5.793237 TGGCCAGGTATATTTGGGATACATA 59.207 40.000 0.00 0.00 34.96 2.29
564 1201 4.605813 TGGCCAGGTATATTTGGGATACAT 59.394 41.667 0.00 0.00 34.96 2.29
565 1202 3.984090 TGGCCAGGTATATTTGGGATACA 59.016 43.478 0.00 0.00 34.96 2.29
566 1203 4.650972 TGGCCAGGTATATTTGGGATAC 57.349 45.455 0.00 0.00 34.96 2.24
567 1204 4.017591 CCATGGCCAGGTATATTTGGGATA 60.018 45.833 17.55 0.00 34.96 2.59
568 1205 3.245730 CCATGGCCAGGTATATTTGGGAT 60.246 47.826 17.55 0.00 34.96 3.85
569 1206 2.109834 CCATGGCCAGGTATATTTGGGA 59.890 50.000 17.55 0.00 34.96 4.37
570 1207 2.528564 CCATGGCCAGGTATATTTGGG 58.471 52.381 17.55 0.00 34.96 4.12
571 1208 2.109834 TCCCATGGCCAGGTATATTTGG 59.890 50.000 17.55 13.54 37.53 3.28
572 1209 3.524095 TCCCATGGCCAGGTATATTTG 57.476 47.619 17.55 4.03 0.00 2.32
573 1210 3.755155 GCTTCCCATGGCCAGGTATATTT 60.755 47.826 17.55 0.00 0.00 1.40
574 1211 2.225117 GCTTCCCATGGCCAGGTATATT 60.225 50.000 17.55 0.00 0.00 1.28
575 1212 1.355720 GCTTCCCATGGCCAGGTATAT 59.644 52.381 17.55 0.00 0.00 0.86
576 1213 0.771127 GCTTCCCATGGCCAGGTATA 59.229 55.000 17.55 0.00 0.00 1.47
577 1214 1.538666 GCTTCCCATGGCCAGGTAT 59.461 57.895 17.55 0.00 0.00 2.73
578 1215 2.689691 GGCTTCCCATGGCCAGGTA 61.690 63.158 17.55 3.27 46.84 3.08
579 1216 4.066139 GGCTTCCCATGGCCAGGT 62.066 66.667 17.55 0.00 46.84 4.00
632 1269 1.406898 GCTCAAAATCTAGGCCCAAGC 59.593 52.381 0.00 0.00 38.76 4.01
633 1270 2.027385 GGCTCAAAATCTAGGCCCAAG 58.973 52.381 0.00 0.00 37.12 3.61
634 1271 2.143876 GGCTCAAAATCTAGGCCCAA 57.856 50.000 0.00 0.00 37.12 4.12
635 1272 3.903208 GGCTCAAAATCTAGGCCCA 57.097 52.632 0.00 0.00 37.12 5.36
638 1275 1.943340 CTTCGGGCTCAAAATCTAGGC 59.057 52.381 0.00 0.00 37.55 3.93
639 1276 2.565841 CCTTCGGGCTCAAAATCTAGG 58.434 52.381 0.00 0.00 0.00 3.02
666 1303 4.693525 GCAAAAACGACGGGCCCG 62.694 66.667 42.17 42.17 46.03 6.13
667 1304 4.693525 CGCAAAAACGACGGGCCC 62.694 66.667 13.57 13.57 34.06 5.80
668 1305 2.940250 AAACGCAAAAACGACGGGCC 62.940 55.000 0.00 0.00 36.70 5.80
669 1306 1.140999 AAAACGCAAAAACGACGGGC 61.141 50.000 0.00 0.00 36.70 6.13
670 1307 1.253289 GAAAAACGCAAAAACGACGGG 59.747 47.619 0.00 0.00 36.70 5.28
671 1308 2.178783 AGAAAAACGCAAAAACGACGG 58.821 42.857 0.00 0.00 36.70 4.79
672 1309 4.977414 TTAGAAAAACGCAAAAACGACG 57.023 36.364 0.00 0.00 36.70 5.12
673 1310 5.286797 ACCTTTAGAAAAACGCAAAAACGAC 59.713 36.000 0.00 0.00 36.70 4.34
674 1311 5.400703 ACCTTTAGAAAAACGCAAAAACGA 58.599 33.333 0.00 0.00 36.70 3.85
675 1312 5.551187 CGACCTTTAGAAAAACGCAAAAACG 60.551 40.000 0.00 0.00 39.50 3.60
676 1313 5.276020 CCGACCTTTAGAAAAACGCAAAAAC 60.276 40.000 0.00 0.00 0.00 2.43
677 1314 4.799428 CCGACCTTTAGAAAAACGCAAAAA 59.201 37.500 0.00 0.00 0.00 1.94
678 1315 4.352887 CCGACCTTTAGAAAAACGCAAAA 58.647 39.130 0.00 0.00 0.00 2.44
679 1316 3.243134 CCCGACCTTTAGAAAAACGCAAA 60.243 43.478 0.00 0.00 0.00 3.68
680 1317 2.291190 CCCGACCTTTAGAAAAACGCAA 59.709 45.455 0.00 0.00 0.00 4.85
681 1318 1.874872 CCCGACCTTTAGAAAAACGCA 59.125 47.619 0.00 0.00 0.00 5.24
682 1319 1.400629 GCCCGACCTTTAGAAAAACGC 60.401 52.381 0.00 0.00 0.00 4.84
683 1320 1.198408 GGCCCGACCTTTAGAAAAACG 59.802 52.381 0.00 0.00 34.51 3.60
684 1321 1.198408 CGGCCCGACCTTTAGAAAAAC 59.802 52.381 0.00 0.00 35.61 2.43
685 1322 1.525941 CGGCCCGACCTTTAGAAAAA 58.474 50.000 0.00 0.00 35.61 1.94
686 1323 0.321830 CCGGCCCGACCTTTAGAAAA 60.322 55.000 3.71 0.00 35.61 2.29
687 1324 1.297364 CCGGCCCGACCTTTAGAAA 59.703 57.895 3.71 0.00 35.61 2.52
688 1325 2.662070 CCCGGCCCGACCTTTAGAA 61.662 63.158 3.71 0.00 35.61 2.10
689 1326 3.078836 CCCGGCCCGACCTTTAGA 61.079 66.667 3.71 0.00 35.61 2.10
690 1327 3.381333 GACCCGGCCCGACCTTTAG 62.381 68.421 3.71 0.00 35.61 1.85
691 1328 3.393106 GACCCGGCCCGACCTTTA 61.393 66.667 3.71 0.00 35.61 1.85
719 1356 3.845472 CGCGTAAAAGCCCGTCGG 61.845 66.667 3.60 3.60 0.00 4.79
720 1357 2.538542 GAACGCGTAAAAGCCCGTCG 62.539 60.000 14.46 0.00 32.89 5.12
721 1358 1.131218 GAACGCGTAAAAGCCCGTC 59.869 57.895 14.46 0.00 32.89 4.79
722 1359 2.660612 CGAACGCGTAAAAGCCCGT 61.661 57.895 14.46 0.00 35.14 5.28
723 1360 2.095096 CGAACGCGTAAAAGCCCG 59.905 61.111 14.46 4.05 0.00 6.13
724 1361 2.477396 CCGAACGCGTAAAAGCCC 59.523 61.111 14.46 0.00 35.23 5.19
725 1362 2.477396 CCCGAACGCGTAAAAGCC 59.523 61.111 14.46 0.00 35.23 4.35
726 1363 2.202260 GCCCGAACGCGTAAAAGC 60.202 61.111 14.46 10.58 35.23 3.51
727 1364 2.477396 GGCCCGAACGCGTAAAAG 59.523 61.111 14.46 3.17 35.23 2.27
728 1365 3.413023 CGGCCCGAACGCGTAAAA 61.413 61.111 14.46 0.00 35.23 1.52
747 1384 1.581447 CTGTTTTCTTGGCCCGAGC 59.419 57.895 0.00 0.00 38.76 5.03
748 1385 1.866853 GCCTGTTTTCTTGGCCCGAG 61.867 60.000 0.00 0.00 40.71 4.63
749 1386 1.901464 GCCTGTTTTCTTGGCCCGA 60.901 57.895 0.00 0.00 40.71 5.14
750 1387 2.650778 GCCTGTTTTCTTGGCCCG 59.349 61.111 0.00 0.00 40.71 6.13
753 1390 1.250840 ATCGGGCCTGTTTTCTTGGC 61.251 55.000 12.43 0.00 45.42 4.52
754 1391 0.527565 CATCGGGCCTGTTTTCTTGG 59.472 55.000 12.43 0.00 0.00 3.61
755 1392 0.527565 CCATCGGGCCTGTTTTCTTG 59.472 55.000 12.43 1.40 0.00 3.02
756 1393 2.961424 CCATCGGGCCTGTTTTCTT 58.039 52.632 12.43 0.00 0.00 2.52
757 1394 4.743018 CCATCGGGCCTGTTTTCT 57.257 55.556 12.43 0.00 0.00 2.52
787 1424 2.708593 AAAAACCCAGGTCCGAGCCC 62.709 60.000 0.00 0.00 0.00 5.19
788 1425 1.228459 AAAAACCCAGGTCCGAGCC 60.228 57.895 0.00 0.00 0.00 4.70
789 1426 4.494515 AAAAACCCAGGTCCGAGC 57.505 55.556 0.00 0.00 0.00 5.03
803 1440 2.725008 CCAAGCCCGACGCAAAAA 59.275 55.556 0.00 0.00 41.38 1.94
804 1441 3.972276 GCCAAGCCCGACGCAAAA 61.972 61.111 0.00 0.00 41.38 2.44
805 1442 3.538785 TAGCCAAGCCCGACGCAAA 62.539 57.895 0.00 0.00 41.38 3.68
806 1443 3.950794 CTAGCCAAGCCCGACGCAA 62.951 63.158 0.00 0.00 41.38 4.85
807 1444 4.451150 CTAGCCAAGCCCGACGCA 62.451 66.667 0.00 0.00 41.38 5.24
825 1462 4.929707 CCATAACTCGGGCCCGGC 62.930 72.222 42.36 5.75 40.25 6.13
826 1463 4.929707 GCCATAACTCGGGCCCGG 62.930 72.222 42.36 33.07 44.53 5.73
831 1468 1.056660 ATACCTGGCCATAACTCGGG 58.943 55.000 5.51 4.26 0.00 5.14
832 1469 4.504858 GATTATACCTGGCCATAACTCGG 58.495 47.826 5.51 5.16 0.00 4.63
833 1470 4.504858 GGATTATACCTGGCCATAACTCG 58.495 47.826 5.51 0.00 0.00 4.18
834 1471 4.288626 TGGGATTATACCTGGCCATAACTC 59.711 45.833 5.51 2.31 0.00 3.01
835 1472 4.247814 TGGGATTATACCTGGCCATAACT 58.752 43.478 5.51 0.00 0.00 2.24
836 1473 4.650972 TGGGATTATACCTGGCCATAAC 57.349 45.455 5.51 0.00 0.00 1.89
837 1474 5.518189 CCATTGGGATTATACCTGGCCATAA 60.518 44.000 5.51 1.61 35.59 1.90
838 1475 4.017591 CCATTGGGATTATACCTGGCCATA 60.018 45.833 5.51 0.00 35.59 2.74
839 1476 3.245730 CCATTGGGATTATACCTGGCCAT 60.246 47.826 5.51 0.00 35.59 4.40
840 1477 2.109834 CCATTGGGATTATACCTGGCCA 59.890 50.000 4.71 4.71 35.59 5.36
841 1478 2.378547 TCCATTGGGATTATACCTGGCC 59.621 50.000 2.09 0.00 38.64 5.36
842 1479 3.806949 TCCATTGGGATTATACCTGGC 57.193 47.619 2.09 0.00 38.64 4.85
856 1493 3.263937 ACAAATCACCCCCAAATCCATTG 59.736 43.478 0.00 0.00 38.84 2.82
857 1494 3.530017 ACAAATCACCCCCAAATCCATT 58.470 40.909 0.00 0.00 0.00 3.16
858 1495 3.203997 ACAAATCACCCCCAAATCCAT 57.796 42.857 0.00 0.00 0.00 3.41
859 1496 2.711895 ACAAATCACCCCCAAATCCA 57.288 45.000 0.00 0.00 0.00 3.41
860 1497 5.454966 AGTATACAAATCACCCCCAAATCC 58.545 41.667 5.50 0.00 0.00 3.01
861 1498 6.833933 AGAAGTATACAAATCACCCCCAAATC 59.166 38.462 5.50 0.00 0.00 2.17
862 1499 6.741724 AGAAGTATACAAATCACCCCCAAAT 58.258 36.000 5.50 0.00 0.00 2.32
863 1500 6.147437 AGAAGTATACAAATCACCCCCAAA 57.853 37.500 5.50 0.00 0.00 3.28
864 1501 5.789574 AGAAGTATACAAATCACCCCCAA 57.210 39.130 5.50 0.00 0.00 4.12
865 1502 5.789574 AAGAAGTATACAAATCACCCCCA 57.210 39.130 5.50 0.00 0.00 4.96
866 1503 6.424032 AGAAAGAAGTATACAAATCACCCCC 58.576 40.000 5.50 0.00 0.00 5.40
867 1504 7.939784 AAGAAAGAAGTATACAAATCACCCC 57.060 36.000 5.50 0.00 0.00 4.95
868 1505 9.841880 GAAAAGAAAGAAGTATACAAATCACCC 57.158 33.333 5.50 0.00 0.00 4.61
874 1511 9.063615 GGGAGTGAAAAGAAAGAAGTATACAAA 57.936 33.333 5.50 0.00 0.00 2.83
875 1512 7.664318 GGGGAGTGAAAAGAAAGAAGTATACAA 59.336 37.037 5.50 0.00 0.00 2.41
876 1513 7.017254 AGGGGAGTGAAAAGAAAGAAGTATACA 59.983 37.037 5.50 0.00 0.00 2.29
877 1514 7.395617 AGGGGAGTGAAAAGAAAGAAGTATAC 58.604 38.462 0.00 0.00 0.00 1.47
878 1515 7.311109 GGAGGGGAGTGAAAAGAAAGAAGTATA 60.311 40.741 0.00 0.00 0.00 1.47
879 1516 6.455690 AGGGGAGTGAAAAGAAAGAAGTAT 57.544 37.500 0.00 0.00 0.00 2.12
880 1517 5.221864 GGAGGGGAGTGAAAAGAAAGAAGTA 60.222 44.000 0.00 0.00 0.00 2.24
881 1518 4.446455 GGAGGGGAGTGAAAAGAAAGAAGT 60.446 45.833 0.00 0.00 0.00 3.01
882 1519 4.075682 GGAGGGGAGTGAAAAGAAAGAAG 58.924 47.826 0.00 0.00 0.00 2.85
883 1520 3.181433 GGGAGGGGAGTGAAAAGAAAGAA 60.181 47.826 0.00 0.00 0.00 2.52
884 1521 2.375509 GGGAGGGGAGTGAAAAGAAAGA 59.624 50.000 0.00 0.00 0.00 2.52
885 1522 2.376855 AGGGAGGGGAGTGAAAAGAAAG 59.623 50.000 0.00 0.00 0.00 2.62
886 1523 2.375509 GAGGGAGGGGAGTGAAAAGAAA 59.624 50.000 0.00 0.00 0.00 2.52
897 1534 2.123251 GAGCGATGAGGGAGGGGA 60.123 66.667 0.00 0.00 0.00 4.81
903 1540 0.107993 TTTGAGCAGAGCGATGAGGG 60.108 55.000 0.00 0.00 0.00 4.30
908 1545 5.627499 TGTTTTATTTTGAGCAGAGCGAT 57.373 34.783 0.00 0.00 0.00 4.58
921 1558 9.019656 GGCAGGGGATTTTATTTTGTTTTATTT 57.980 29.630 0.00 0.00 0.00 1.40
924 1561 7.323052 AGGCAGGGGATTTTATTTTGTTTTA 57.677 32.000 0.00 0.00 0.00 1.52
929 1568 4.033009 AGGAGGCAGGGGATTTTATTTTG 58.967 43.478 0.00 0.00 0.00 2.44
932 1571 2.158608 CGAGGAGGCAGGGGATTTTATT 60.159 50.000 0.00 0.00 0.00 1.40
934 1573 0.837272 CGAGGAGGCAGGGGATTTTA 59.163 55.000 0.00 0.00 0.00 1.52
1452 2112 2.680352 AGATCGACGGGCAGGTGT 60.680 61.111 0.00 0.00 0.00 4.16
1476 2139 3.249189 AGGAGGCCGTTGCAGGAA 61.249 61.111 0.00 0.00 40.13 3.36
1526 2189 1.069703 CGACATAATGGAATGCGGCAG 60.070 52.381 9.25 0.00 0.00 4.85
1529 2192 1.939934 ACACGACATAATGGAATGCGG 59.060 47.619 0.00 0.00 33.58 5.69
1973 2811 7.418408 CAGATCCAAATCATCAAACTGATCAG 58.582 38.462 21.37 21.37 34.28 2.90
1992 2830 4.889409 TGAATAAAACCATGAGCCAGATCC 59.111 41.667 0.00 0.00 0.00 3.36
2383 3227 3.285484 CTTCTTATGAAGGCACCAGCAT 58.715 45.455 9.92 0.00 44.33 3.79
2555 3403 9.321562 AGAAAGTTCAGTACAAATTACGAAAGA 57.678 29.630 0.00 0.00 0.00 2.52
2687 3552 4.231890 AGTTTAAGCCTGGGGATTTGGATA 59.768 41.667 0.00 0.00 31.96 2.59
2798 3699 6.637254 GCATAACATCATCAGCAGAATTTCAG 59.363 38.462 0.00 0.00 0.00 3.02
2839 3740 5.728471 TCAAAACATTGGCAGTGAAGAAAA 58.272 33.333 17.47 0.00 0.00 2.29
2913 3814 1.738030 GCATCCAAAGAAGTGGCATGC 60.738 52.381 9.90 9.90 38.68 4.06
2977 3878 1.490693 ATGGCGCGTTCGATGATGTC 61.491 55.000 8.43 0.00 38.10 3.06
3141 4047 0.393077 ACCGCACTAGAAGCACAACT 59.607 50.000 0.00 0.00 0.00 3.16
3142 4048 1.725164 GTACCGCACTAGAAGCACAAC 59.275 52.381 0.00 0.00 0.00 3.32
3143 4049 1.616865 AGTACCGCACTAGAAGCACAA 59.383 47.619 0.00 0.00 34.98 3.33
3156 4062 1.083489 TGCAGCATTACAAGTACCGC 58.917 50.000 0.00 0.00 0.00 5.68
3298 4654 4.497473 TTGGTAGCTTTGGTCAAATTCG 57.503 40.909 0.00 0.00 0.00 3.34
3323 4679 9.238368 CTGTGTATACAAAATTTTAGAAGGGGA 57.762 33.333 7.25 0.00 36.14 4.81
3324 4680 9.020731 ACTGTGTATACAAAATTTTAGAAGGGG 57.979 33.333 7.25 0.00 36.14 4.79
3340 4696 5.004821 CGATGAGTTCAGCAACTGTGTATAC 59.995 44.000 0.00 0.00 43.37 1.47
3345 4701 2.138320 ACGATGAGTTCAGCAACTGTG 58.862 47.619 0.00 0.00 43.37 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.