Multiple sequence alignment - TraesCS7B01G465100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G465100 chr7B 100.000 4432 0 0 1 4432 721213715 721209284 0.000000e+00 8185
1 TraesCS7B01G465100 chr7B 91.131 451 26 4 5 442 36915320 36914871 2.280000e-167 599
2 TraesCS7B01G465100 chr7B 91.275 447 26 3 5 438 733442051 733441605 8.210000e-167 597
3 TraesCS7B01G465100 chr7B 90.950 442 32 4 5 439 570215219 570215659 4.940000e-164 588
4 TraesCS7B01G465100 chr7B 90.991 444 27 4 5 435 725048834 725049277 1.780000e-163 586
5 TraesCS7B01G465100 chr7B 79.861 144 22 5 4260 4398 2888256 2888397 1.010000e-16 99
6 TraesCS7B01G465100 chr7D 86.594 3864 261 108 662 4423 623544200 623540492 0.000000e+00 4028
7 TraesCS7B01G465100 chr7D 81.553 309 54 1 2368 2673 623554802 623554494 7.360000e-63 252
8 TraesCS7B01G465100 chr7D 78.889 270 54 3 1303 1571 623555796 623555529 3.520000e-41 180
9 TraesCS7B01G465100 chr7D 95.238 84 4 0 453 536 623553241 623553158 2.780000e-27 134
10 TraesCS7B01G465100 chr7D 80.556 144 28 0 2161 2304 623554964 623554821 1.300000e-20 111
11 TraesCS7B01G465100 chr7A 87.448 3370 213 90 1118 4427 719579318 719576099 0.000000e+00 3687
12 TraesCS7B01G465100 chr7A 86.207 464 41 6 5 445 662992102 662992565 8.620000e-132 481
13 TraesCS7B01G465100 chr7A 84.595 383 15 24 753 1121 719579695 719579343 1.530000e-89 340
14 TraesCS7B01G465100 chr7A 81.877 309 53 1 2368 2673 719581836 719581528 1.580000e-64 257
15 TraesCS7B01G465100 chr7A 91.534 189 10 3 453 636 719580239 719580052 5.690000e-64 255
16 TraesCS7B01G465100 chr7A 78.889 270 52 4 1303 1571 719582825 719582560 1.270000e-40 178
17 TraesCS7B01G465100 chr1B 91.131 451 26 4 5 441 13907747 13907297 2.280000e-167 599
18 TraesCS7B01G465100 chr2B 91.051 447 27 3 5 438 655529238 655528792 3.820000e-165 592
19 TraesCS7B01G465100 chr2B 90.869 449 26 3 5 438 615764165 615763717 4.940000e-164 588
20 TraesCS7B01G465100 chr2B 83.212 137 18 3 4267 4398 252084113 252084249 2.170000e-23 121
21 TraesCS7B01G465100 chr4A 90.402 448 29 4 5 438 690913182 690912735 1.070000e-160 577
22 TraesCS7B01G465100 chr4A 89.955 448 30 5 5 438 727195893 727195447 8.320000e-157 564
23 TraesCS7B01G465100 chrUn 87.419 461 34 6 5 442 85079707 85079248 3.950000e-140 508
24 TraesCS7B01G465100 chrUn 87.202 461 35 6 5 442 282308061 282308520 1.840000e-138 503
25 TraesCS7B01G465100 chrUn 87.202 461 35 6 5 442 292341569 292342028 1.840000e-138 503
26 TraesCS7B01G465100 chr5B 87.229 462 35 7 5 446 538021315 538021772 5.120000e-139 505
27 TraesCS7B01G465100 chr2A 85.903 454 42 4 7 438 80486374 80485921 8.680000e-127 464
28 TraesCS7B01G465100 chr1D 84.946 465 45 10 5 444 416798439 416798903 8.740000e-122 448
29 TraesCS7B01G465100 chr2D 94.366 71 4 0 375 445 642845999 642845929 4.690000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G465100 chr7B 721209284 721213715 4431 True 8185.0 8185 100.0000 1 4432 1 chr7B.!!$R2 4431
1 TraesCS7B01G465100 chr7D 623540492 623544200 3708 True 4028.0 4028 86.5940 662 4423 1 chr7D.!!$R1 3761
2 TraesCS7B01G465100 chr7A 719576099 719582825 6726 True 943.4 3687 84.8686 453 4427 5 chr7A.!!$R1 3974

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
250 251 0.033796 ATCAATGGCTGTGGTCCAGG 60.034 55.0 0.00 0.0 41.81 4.45 F
273 274 0.034477 GTGGACCATTGATCCCGGTT 60.034 55.0 0.00 0.0 35.12 4.44 F
294 295 0.035739 GTGCCTAGAACCGGGACAAA 59.964 55.0 6.32 0.0 41.87 2.83 F
390 391 0.036765 CCATTCGTGAAGAACCGGGA 60.037 55.0 6.32 0.0 42.39 5.14 F
1727 4190 0.178941 GATAGAGGAAGGGGGCCGTA 60.179 60.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1287 3731 0.038892 CAAGCAGGCACCATTGTCAC 60.039 55.0 0.00 0.0 0.00 3.67 R
1596 4059 0.108804 GGATGGACAGAAGCGTCGAA 60.109 55.0 0.00 0.0 36.73 3.71 R
2045 4509 0.804989 GATTTCTTGGGTCCACAGCG 59.195 55.0 0.00 0.0 0.00 5.18 R
2066 4530 1.350193 CACAGACTGCCACACGATAC 58.650 55.0 1.25 0.0 0.00 2.24 R
3439 5933 0.108774 GTAAGGGGTGCTATGAGGCC 59.891 60.0 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.151502 AATGGAGCTTCGAGAGGAGA 57.848 50.000 0.00 0.00 39.93 3.71
20 21 2.151502 ATGGAGCTTCGAGAGGAGAA 57.848 50.000 0.00 0.00 39.93 2.87
21 22 1.924731 TGGAGCTTCGAGAGGAGAAA 58.075 50.000 0.00 0.00 39.93 2.52
22 23 1.821753 TGGAGCTTCGAGAGGAGAAAG 59.178 52.381 0.00 0.00 39.93 2.62
23 24 1.470805 GGAGCTTCGAGAGGAGAAAGC 60.471 57.143 0.00 0.00 39.93 3.51
26 27 3.093057 AGCTTCGAGAGGAGAAAGCTTA 58.907 45.455 0.00 0.00 39.93 3.09
27 28 3.511934 AGCTTCGAGAGGAGAAAGCTTAA 59.488 43.478 0.00 0.00 39.93 1.85
30 31 5.393243 GCTTCGAGAGGAGAAAGCTTAACTA 60.393 44.000 0.00 0.00 39.93 2.24
32 33 5.254901 TCGAGAGGAGAAAGCTTAACTAGT 58.745 41.667 0.00 0.00 0.00 2.57
33 34 5.124138 TCGAGAGGAGAAAGCTTAACTAGTG 59.876 44.000 0.00 0.00 0.00 2.74
34 35 5.106078 CGAGAGGAGAAAGCTTAACTAGTGT 60.106 44.000 0.00 0.00 0.00 3.55
35 36 6.031751 AGAGGAGAAAGCTTAACTAGTGTG 57.968 41.667 0.00 0.00 0.00 3.82
36 37 5.540719 AGAGGAGAAAGCTTAACTAGTGTGT 59.459 40.000 0.00 0.00 0.00 3.72
38 39 5.540719 AGGAGAAAGCTTAACTAGTGTGTCT 59.459 40.000 0.00 0.00 0.00 3.41
39 40 5.865013 GGAGAAAGCTTAACTAGTGTGTCTC 59.135 44.000 0.00 4.14 0.00 3.36
40 41 5.462405 AGAAAGCTTAACTAGTGTGTCTCG 58.538 41.667 0.00 0.00 0.00 4.04
43 44 2.877335 CTTAACTAGTGTGTCTCGGGC 58.123 52.381 0.00 0.00 0.00 6.13
44 45 1.913778 TAACTAGTGTGTCTCGGGCA 58.086 50.000 0.00 0.00 0.00 5.36
45 46 1.267121 AACTAGTGTGTCTCGGGCAT 58.733 50.000 0.00 0.00 0.00 4.40
46 47 1.267121 ACTAGTGTGTCTCGGGCATT 58.733 50.000 0.00 0.00 0.00 3.56
48 49 2.271800 CTAGTGTGTCTCGGGCATTTC 58.728 52.381 0.00 0.00 0.00 2.17
49 50 0.396435 AGTGTGTCTCGGGCATTTCA 59.604 50.000 0.00 0.00 0.00 2.69
50 51 1.003580 AGTGTGTCTCGGGCATTTCAT 59.996 47.619 0.00 0.00 0.00 2.57
51 52 1.398390 GTGTGTCTCGGGCATTTCATC 59.602 52.381 0.00 0.00 0.00 2.92
52 53 0.652592 GTGTCTCGGGCATTTCATCG 59.347 55.000 0.00 0.00 0.00 3.84
54 55 1.066502 TGTCTCGGGCATTTCATCGAA 60.067 47.619 0.00 0.00 0.00 3.71
57 58 1.062587 CTCGGGCATTTCATCGAACAC 59.937 52.381 0.00 0.00 0.00 3.32
58 59 1.086696 CGGGCATTTCATCGAACACT 58.913 50.000 0.00 0.00 0.00 3.55
59 60 1.468520 CGGGCATTTCATCGAACACTT 59.531 47.619 0.00 0.00 0.00 3.16
60 61 2.476185 CGGGCATTTCATCGAACACTTC 60.476 50.000 0.00 0.00 0.00 3.01
61 62 2.487762 GGGCATTTCATCGAACACTTCA 59.512 45.455 0.00 0.00 0.00 3.02
62 63 3.129287 GGGCATTTCATCGAACACTTCAT 59.871 43.478 0.00 0.00 0.00 2.57
63 64 4.100529 GGCATTTCATCGAACACTTCATG 58.899 43.478 0.00 0.00 0.00 3.07
64 65 4.379813 GGCATTTCATCGAACACTTCATGT 60.380 41.667 0.00 0.00 46.42 3.21
76 77 2.941064 CACTTCATGTGCATAGGAGGTG 59.059 50.000 21.86 21.86 40.06 4.00
81 82 2.159179 TGTGCATAGGAGGTGAGCTA 57.841 50.000 0.00 0.00 0.00 3.32
82 83 2.034878 TGTGCATAGGAGGTGAGCTAG 58.965 52.381 0.00 0.00 0.00 3.42
84 85 2.295909 GTGCATAGGAGGTGAGCTAGAG 59.704 54.545 0.00 0.00 0.00 2.43
87 88 2.060050 TAGGAGGTGAGCTAGAGCAC 57.940 55.000 4.01 0.00 45.16 4.40
90 91 3.713650 GGTGAGCTAGAGCACCCA 58.286 61.111 18.65 0.00 46.91 4.51
91 92 1.983224 GGTGAGCTAGAGCACCCAA 59.017 57.895 18.65 0.00 46.91 4.12
92 93 0.324943 GGTGAGCTAGAGCACCCAAA 59.675 55.000 18.65 0.00 46.91 3.28
93 94 1.065126 GGTGAGCTAGAGCACCCAAAT 60.065 52.381 18.65 0.00 46.91 2.32
95 96 1.020437 GAGCTAGAGCACCCAAATGC 58.980 55.000 4.01 0.00 46.50 3.56
102 103 2.364186 CACCCAAATGCCCTCCCC 60.364 66.667 0.00 0.00 0.00 4.81
103 104 2.537959 ACCCAAATGCCCTCCCCT 60.538 61.111 0.00 0.00 0.00 4.79
105 106 2.124151 CCAAATGCCCTCCCCTCG 60.124 66.667 0.00 0.00 0.00 4.63
106 107 2.830370 CAAATGCCCTCCCCTCGC 60.830 66.667 0.00 0.00 0.00 5.03
107 108 4.129148 AAATGCCCTCCCCTCGCC 62.129 66.667 0.00 0.00 0.00 5.54
118 119 2.671619 CCTCGCCGGCCAGAAAAA 60.672 61.111 23.78 0.00 0.00 1.94
134 135 2.208326 AAAAACAAAGTGCTCTGCCG 57.792 45.000 0.00 0.00 0.00 5.69
135 136 0.249031 AAAACAAAGTGCTCTGCCGC 60.249 50.000 0.00 0.00 0.00 6.53
137 138 4.093952 CAAAGTGCTCTGCCGCGG 62.094 66.667 24.05 24.05 0.00 6.46
146 147 4.969196 CTGCCGCGGCGATGGTAT 62.969 66.667 41.73 0.00 45.51 2.73
148 149 2.125673 GCCGCGGCGATGGTATAT 60.126 61.111 37.24 0.00 0.00 0.86
149 150 1.140161 GCCGCGGCGATGGTATATA 59.860 57.895 37.24 0.00 0.00 0.86
150 151 0.249322 GCCGCGGCGATGGTATATAT 60.249 55.000 37.24 0.00 0.00 0.86
151 152 1.001048 GCCGCGGCGATGGTATATATA 60.001 52.381 37.24 0.00 0.00 0.86
153 154 2.351447 CCGCGGCGATGGTATATATAGG 60.351 54.545 25.92 0.00 0.00 2.57
154 155 2.673833 GCGGCGATGGTATATATAGGC 58.326 52.381 12.98 0.00 0.00 3.93
155 156 2.035449 GCGGCGATGGTATATATAGGCA 59.965 50.000 12.98 0.00 0.00 4.75
156 157 3.491964 GCGGCGATGGTATATATAGGCAA 60.492 47.826 12.98 0.00 0.00 4.52
157 158 4.049186 CGGCGATGGTATATATAGGCAAC 58.951 47.826 0.00 0.00 0.00 4.17
172 173 1.890489 GGCAACTTATTTGTCCCGGTT 59.110 47.619 0.00 0.00 37.54 4.44
175 176 3.192633 GCAACTTATTTGTCCCGGTTCAT 59.807 43.478 0.00 0.00 37.54 2.57
176 177 4.732784 CAACTTATTTGTCCCGGTTCATG 58.267 43.478 0.00 0.00 0.00 3.07
177 178 3.352648 ACTTATTTGTCCCGGTTCATGG 58.647 45.455 0.00 0.00 0.00 3.66
179 180 0.251564 ATTTGTCCCGGTTCATGGCA 60.252 50.000 0.00 0.00 0.00 4.92
180 181 0.251564 TTTGTCCCGGTTCATGGCAT 60.252 50.000 0.00 0.00 0.00 4.40
181 182 0.251564 TTGTCCCGGTTCATGGCATT 60.252 50.000 0.00 0.00 0.00 3.56
182 183 0.621082 TGTCCCGGTTCATGGCATTA 59.379 50.000 0.00 0.00 0.00 1.90
185 186 0.744281 CCCGGTTCATGGCATTAACC 59.256 55.000 26.55 26.55 39.44 2.85
188 189 0.744281 GGTTCATGGCATTAACCGGG 59.256 55.000 23.61 0.35 33.85 5.73
189 190 1.683629 GGTTCATGGCATTAACCGGGA 60.684 52.381 23.61 2.80 33.85 5.14
190 191 1.404035 GTTCATGGCATTAACCGGGAC 59.596 52.381 12.47 0.00 0.00 4.46
191 192 0.916086 TCATGGCATTAACCGGGACT 59.084 50.000 6.32 0.00 0.00 3.85
193 194 2.506231 TCATGGCATTAACCGGGACTAA 59.494 45.455 6.32 0.31 0.00 2.24
194 195 3.054287 TCATGGCATTAACCGGGACTAAA 60.054 43.478 6.32 0.00 0.00 1.85
196 197 3.970842 TGGCATTAACCGGGACTAAATT 58.029 40.909 6.32 0.00 0.00 1.82
198 199 3.317149 GGCATTAACCGGGACTAAATTCC 59.683 47.826 6.32 0.00 34.52 3.01
199 200 4.204799 GCATTAACCGGGACTAAATTCCT 58.795 43.478 6.32 0.00 35.76 3.36
201 202 4.492494 TTAACCGGGACTAAATTCCTCC 57.508 45.455 6.32 0.00 35.76 4.30
202 203 2.265526 ACCGGGACTAAATTCCTCCT 57.734 50.000 6.32 0.00 35.76 3.69
203 204 2.558974 ACCGGGACTAAATTCCTCCTT 58.441 47.619 6.32 0.00 35.76 3.36
205 206 2.772515 CCGGGACTAAATTCCTCCTTCT 59.227 50.000 0.00 0.00 35.76 2.85
206 207 3.965347 CCGGGACTAAATTCCTCCTTCTA 59.035 47.826 0.00 0.00 35.76 2.10
207 208 4.593634 CCGGGACTAAATTCCTCCTTCTAT 59.406 45.833 0.00 0.00 35.76 1.98
208 209 5.778750 CCGGGACTAAATTCCTCCTTCTATA 59.221 44.000 0.00 0.00 35.76 1.31
209 210 6.295180 CCGGGACTAAATTCCTCCTTCTATAC 60.295 46.154 0.00 0.00 35.76 1.47
210 211 6.295180 CGGGACTAAATTCCTCCTTCTATACC 60.295 46.154 0.00 0.00 35.76 2.73
211 212 6.295180 GGGACTAAATTCCTCCTTCTATACCG 60.295 46.154 0.00 0.00 35.76 4.02
212 213 6.295180 GGACTAAATTCCTCCTTCTATACCGG 60.295 46.154 0.00 0.00 32.24 5.28
214 215 5.970501 AAATTCCTCCTTCTATACCGGTT 57.029 39.130 15.04 3.05 0.00 4.44
216 217 3.675348 TCCTCCTTCTATACCGGTTCA 57.325 47.619 15.04 0.00 0.00 3.18
217 218 4.194678 TCCTCCTTCTATACCGGTTCAT 57.805 45.455 15.04 3.06 0.00 2.57
218 219 3.895656 TCCTCCTTCTATACCGGTTCATG 59.104 47.826 15.04 0.75 0.00 3.07
219 220 3.006967 CCTCCTTCTATACCGGTTCATGG 59.993 52.174 15.04 2.78 0.00 3.66
220 221 2.367567 TCCTTCTATACCGGTTCATGGC 59.632 50.000 15.04 0.00 0.00 4.40
221 222 2.104111 CCTTCTATACCGGTTCATGGCA 59.896 50.000 15.04 0.00 0.00 4.92
224 225 1.067974 CTATACCGGTTCATGGCACGA 59.932 52.381 15.04 0.00 0.00 4.35
229 230 2.867472 GTTCATGGCACGAACCGG 59.133 61.111 15.10 0.00 37.40 5.28
230 231 1.964373 GTTCATGGCACGAACCGGT 60.964 57.895 15.10 0.00 37.40 5.28
231 232 0.671163 GTTCATGGCACGAACCGGTA 60.671 55.000 15.10 0.00 37.40 4.02
232 233 0.250793 TTCATGGCACGAACCGGTAT 59.749 50.000 8.00 0.00 0.00 2.73
233 234 0.179094 TCATGGCACGAACCGGTATC 60.179 55.000 8.00 7.14 0.00 2.24
234 235 0.461163 CATGGCACGAACCGGTATCA 60.461 55.000 8.00 0.36 0.00 2.15
235 236 0.250793 ATGGCACGAACCGGTATCAA 59.749 50.000 8.00 0.00 0.00 2.57
236 237 0.250793 TGGCACGAACCGGTATCAAT 59.749 50.000 8.00 0.00 0.00 2.57
237 238 0.655733 GGCACGAACCGGTATCAATG 59.344 55.000 8.00 10.04 0.00 2.82
238 239 0.655733 GCACGAACCGGTATCAATGG 59.344 55.000 8.00 0.00 0.00 3.16
239 240 0.655733 CACGAACCGGTATCAATGGC 59.344 55.000 8.00 0.00 0.00 4.40
241 242 0.937304 CGAACCGGTATCAATGGCTG 59.063 55.000 8.00 0.00 0.00 4.85
242 243 1.742411 CGAACCGGTATCAATGGCTGT 60.742 52.381 8.00 0.00 0.00 4.40
243 244 1.670811 GAACCGGTATCAATGGCTGTG 59.329 52.381 8.00 0.00 0.00 3.66
244 245 0.107214 ACCGGTATCAATGGCTGTGG 60.107 55.000 4.49 0.00 0.00 4.17
246 247 1.299541 CGGTATCAATGGCTGTGGTC 58.700 55.000 0.00 0.00 0.00 4.02
248 249 1.064758 GGTATCAATGGCTGTGGTCCA 60.065 52.381 0.00 0.00 38.09 4.02
250 251 0.033796 ATCAATGGCTGTGGTCCAGG 60.034 55.000 0.00 0.00 41.81 4.45
251 252 1.133181 TCAATGGCTGTGGTCCAGGA 61.133 55.000 0.00 0.00 41.81 3.86
252 253 0.679002 CAATGGCTGTGGTCCAGGAG 60.679 60.000 0.00 0.00 41.81 3.69
253 254 2.490270 AATGGCTGTGGTCCAGGAGC 62.490 60.000 12.14 12.14 41.81 4.70
255 256 4.008933 GCTGTGGTCCAGGAGCGT 62.009 66.667 14.10 0.00 41.81 5.07
256 257 2.047844 CTGTGGTCCAGGAGCGTG 60.048 66.667 14.10 2.85 37.54 5.34
258 259 3.311110 GTGGTCCAGGAGCGTGGA 61.311 66.667 14.10 7.76 44.82 4.02
262 263 2.284625 TCCAGGAGCGTGGACCAT 60.285 61.111 7.76 0.00 41.99 3.55
263 264 1.918293 TCCAGGAGCGTGGACCATT 60.918 57.895 7.76 0.00 41.99 3.16
264 265 1.746615 CCAGGAGCGTGGACCATTG 60.747 63.158 0.00 0.00 40.44 2.82
266 267 0.107508 CAGGAGCGTGGACCATTGAT 60.108 55.000 0.00 0.00 0.00 2.57
267 268 0.179000 AGGAGCGTGGACCATTGATC 59.821 55.000 0.00 1.60 0.00 2.92
268 269 0.815615 GGAGCGTGGACCATTGATCC 60.816 60.000 15.59 15.59 36.70 3.36
270 271 2.180204 GCGTGGACCATTGATCCCG 61.180 63.158 0.00 0.00 35.12 5.14
271 272 1.523711 CGTGGACCATTGATCCCGG 60.524 63.158 0.00 0.00 35.12 5.73
272 273 1.607612 GTGGACCATTGATCCCGGT 59.392 57.895 0.00 0.00 35.12 5.28
273 274 0.034477 GTGGACCATTGATCCCGGTT 60.034 55.000 0.00 0.00 35.12 4.44
274 275 0.254747 TGGACCATTGATCCCGGTTC 59.745 55.000 0.00 0.00 35.12 3.62
275 276 0.814010 GGACCATTGATCCCGGTTCG 60.814 60.000 0.00 0.00 31.63 3.95
276 277 0.107848 GACCATTGATCCCGGTTCGT 60.108 55.000 0.00 0.00 31.63 3.85
278 279 1.714899 CCATTGATCCCGGTTCGTGC 61.715 60.000 0.00 0.00 0.00 5.34
279 280 1.451387 ATTGATCCCGGTTCGTGCC 60.451 57.895 0.00 0.00 0.00 5.01
281 282 1.259142 TTGATCCCGGTTCGTGCCTA 61.259 55.000 0.00 0.00 0.00 3.93
282 283 1.067582 GATCCCGGTTCGTGCCTAG 59.932 63.158 0.00 0.00 0.00 3.02
283 284 1.380785 ATCCCGGTTCGTGCCTAGA 60.381 57.895 0.00 0.00 0.00 2.43
284 285 0.974010 ATCCCGGTTCGTGCCTAGAA 60.974 55.000 0.00 0.00 0.00 2.10
285 286 1.447314 CCCGGTTCGTGCCTAGAAC 60.447 63.158 0.00 7.30 45.16 3.01
288 289 4.180496 GTTCGTGCCTAGAACCGG 57.820 61.111 0.00 0.00 41.38 5.28
290 291 1.607178 TTCGTGCCTAGAACCGGGA 60.607 57.895 6.32 0.00 0.00 5.14
291 292 1.880819 TTCGTGCCTAGAACCGGGAC 61.881 60.000 6.32 0.00 39.24 4.46
292 293 2.642254 CGTGCCTAGAACCGGGACA 61.642 63.158 6.32 0.00 42.32 4.02
293 294 1.675219 GTGCCTAGAACCGGGACAA 59.325 57.895 6.32 0.00 41.87 3.18
294 295 0.035739 GTGCCTAGAACCGGGACAAA 59.964 55.000 6.32 0.00 41.87 2.83
295 296 0.988832 TGCCTAGAACCGGGACAAAT 59.011 50.000 6.32 0.00 0.00 2.32
296 297 1.339631 TGCCTAGAACCGGGACAAATG 60.340 52.381 6.32 0.00 0.00 2.32
297 298 2.017113 GCCTAGAACCGGGACAAATGG 61.017 57.143 6.32 0.00 0.00 3.16
300 301 2.420058 AGAACCGGGACAAATGGATC 57.580 50.000 6.32 0.00 0.00 3.36
301 302 1.064685 AGAACCGGGACAAATGGATCC 60.065 52.381 6.32 4.20 0.00 3.36
309 310 3.203716 GGACAAATGGATCCCTACGAAC 58.796 50.000 9.90 0.00 0.00 3.95
311 312 2.210116 CAAATGGATCCCTACGAACCG 58.790 52.381 9.90 0.00 36.19 4.44
312 313 0.756903 AATGGATCCCTACGAACCGG 59.243 55.000 9.90 0.00 36.19 5.28
317 318 2.681064 CCCTACGAACCGGGACCA 60.681 66.667 6.32 0.00 43.44 4.02
318 319 2.285024 CCCTACGAACCGGGACCAA 61.285 63.158 6.32 0.00 43.44 3.67
320 321 0.461339 CCTACGAACCGGGACCAATG 60.461 60.000 6.32 0.00 0.00 2.82
321 322 1.078988 TACGAACCGGGACCAATGC 60.079 57.895 6.32 0.00 0.00 3.56
322 323 2.524951 TACGAACCGGGACCAATGCC 62.525 60.000 6.32 0.00 0.00 4.40
325 326 3.879180 AACCGGGACCAATGCCCAC 62.879 63.158 6.32 0.00 46.36 4.61
327 328 4.402528 CGGGACCAATGCCCACGA 62.403 66.667 0.00 0.00 46.36 4.35
328 329 2.438434 GGGACCAATGCCCACGAG 60.438 66.667 0.00 0.00 45.31 4.18
329 330 2.438434 GGACCAATGCCCACGAGG 60.438 66.667 0.00 0.00 39.47 4.63
351 352 3.403558 GGCTGACCCCCTGGACTC 61.404 72.222 0.00 0.00 34.81 3.36
354 355 1.910722 CTGACCCCCTGGACTCATG 59.089 63.158 0.00 0.00 34.81 3.07
355 356 0.618680 CTGACCCCCTGGACTCATGA 60.619 60.000 0.00 0.00 34.81 3.07
356 357 0.178876 TGACCCCCTGGACTCATGAA 60.179 55.000 0.00 0.00 34.81 2.57
357 358 0.253327 GACCCCCTGGACTCATGAAC 59.747 60.000 0.00 0.00 34.81 3.18
359 360 0.254178 CCCCCTGGACTCATGAACTG 59.746 60.000 0.00 0.00 0.00 3.16
361 362 0.254178 CCCTGGACTCATGAACTGGG 59.746 60.000 16.85 16.85 36.06 4.45
362 363 0.987294 CCTGGACTCATGAACTGGGT 59.013 55.000 0.00 0.00 42.99 4.51
369 370 3.878778 ACTCATGAACTGGGTCTAATGC 58.121 45.455 0.00 0.00 30.59 3.56
370 371 3.209410 CTCATGAACTGGGTCTAATGCC 58.791 50.000 0.00 0.00 0.00 4.40
371 372 2.092429 TCATGAACTGGGTCTAATGCCC 60.092 50.000 0.00 0.00 46.26 5.36
377 378 0.182537 TGGGTCTAATGCCCCATTCG 59.817 55.000 0.00 0.00 46.06 3.34
378 379 0.182775 GGGTCTAATGCCCCATTCGT 59.817 55.000 0.00 0.00 40.88 3.85
380 381 1.134220 GGTCTAATGCCCCATTCGTGA 60.134 52.381 0.00 0.00 35.54 4.35
381 382 2.639065 GTCTAATGCCCCATTCGTGAA 58.361 47.619 0.00 0.00 35.54 3.18
382 383 2.614057 GTCTAATGCCCCATTCGTGAAG 59.386 50.000 0.00 0.00 35.54 3.02
383 384 2.503765 TCTAATGCCCCATTCGTGAAGA 59.496 45.455 0.00 0.00 35.54 2.87
384 385 2.214376 AATGCCCCATTCGTGAAGAA 57.786 45.000 0.00 0.00 43.93 2.52
386 387 0.608035 TGCCCCATTCGTGAAGAACC 60.608 55.000 0.00 0.00 42.39 3.62
387 388 1.644786 GCCCCATTCGTGAAGAACCG 61.645 60.000 0.00 0.00 42.39 4.44
388 389 1.024579 CCCCATTCGTGAAGAACCGG 61.025 60.000 0.00 0.00 42.39 5.28
389 390 1.024579 CCCATTCGTGAAGAACCGGG 61.025 60.000 6.32 3.66 44.06 5.73
390 391 0.036765 CCATTCGTGAAGAACCGGGA 60.037 55.000 6.32 0.00 42.39 5.14
391 392 1.076332 CATTCGTGAAGAACCGGGAC 58.924 55.000 6.32 0.00 42.39 4.46
392 393 0.974383 ATTCGTGAAGAACCGGGACT 59.026 50.000 6.32 0.73 42.39 3.85
393 394 1.619654 TTCGTGAAGAACCGGGACTA 58.380 50.000 6.32 0.00 33.14 2.59
395 396 2.173519 TCGTGAAGAACCGGGACTAAT 58.826 47.619 6.32 0.00 0.00 1.73
396 397 2.094390 TCGTGAAGAACCGGGACTAATG 60.094 50.000 6.32 2.94 0.00 1.90
397 398 2.629051 GTGAAGAACCGGGACTAATGG 58.371 52.381 6.32 0.00 0.00 3.16
398 399 1.557832 TGAAGAACCGGGACTAATGGG 59.442 52.381 6.32 0.00 0.00 4.00
399 400 0.255033 AAGAACCGGGACTAATGGGC 59.745 55.000 6.32 0.00 0.00 5.36
400 401 0.620700 AGAACCGGGACTAATGGGCT 60.621 55.000 6.32 0.00 0.00 5.19
403 404 2.203209 CGGGACTAATGGGCTGGC 60.203 66.667 0.00 0.00 0.00 4.85
404 405 2.195956 GGGACTAATGGGCTGGCC 59.804 66.667 14.23 14.23 0.00 5.36
405 406 2.689691 GGGACTAATGGGCTGGCCA 61.690 63.158 26.08 26.08 37.98 5.36
406 407 1.306296 GGACTAATGGGCTGGCCAA 59.694 57.895 27.56 10.85 37.98 4.52
419 420 2.650778 GCCAAGCCCGAACCAAAG 59.349 61.111 0.00 0.00 0.00 2.77
420 421 2.650778 CCAAGCCCGAACCAAAGC 59.349 61.111 0.00 0.00 0.00 3.51
421 422 2.650778 CAAGCCCGAACCAAAGCC 59.349 61.111 0.00 0.00 0.00 4.35
422 423 2.600470 AAGCCCGAACCAAAGCCC 60.600 61.111 0.00 0.00 0.00 5.19
423 424 3.146828 AAGCCCGAACCAAAGCCCT 62.147 57.895 0.00 0.00 0.00 5.19
424 425 3.373565 GCCCGAACCAAAGCCCTG 61.374 66.667 0.00 0.00 0.00 4.45
426 427 1.530655 CCCGAACCAAAGCCCTGTT 60.531 57.895 0.00 0.00 0.00 3.16
427 428 1.112916 CCCGAACCAAAGCCCTGTTT 61.113 55.000 0.00 0.00 0.00 2.83
428 429 0.750249 CCGAACCAAAGCCCTGTTTT 59.250 50.000 0.00 0.00 0.00 2.43
429 430 1.269569 CCGAACCAAAGCCCTGTTTTC 60.270 52.381 0.00 0.00 0.00 2.29
430 431 1.681264 CGAACCAAAGCCCTGTTTTCT 59.319 47.619 0.00 0.00 0.00 2.52
431 432 2.882137 CGAACCAAAGCCCTGTTTTCTA 59.118 45.455 0.00 0.00 0.00 2.10
434 435 4.717279 ACCAAAGCCCTGTTTTCTACTA 57.283 40.909 0.00 0.00 0.00 1.82
435 436 5.056553 ACCAAAGCCCTGTTTTCTACTAA 57.943 39.130 0.00 0.00 0.00 2.24
436 437 5.641155 ACCAAAGCCCTGTTTTCTACTAAT 58.359 37.500 0.00 0.00 0.00 1.73
438 439 5.105756 CCAAAGCCCTGTTTTCTACTAATGG 60.106 44.000 0.00 0.00 0.00 3.16
439 440 4.929146 AGCCCTGTTTTCTACTAATGGT 57.071 40.909 0.00 0.00 0.00 3.55
440 441 4.589908 AGCCCTGTTTTCTACTAATGGTG 58.410 43.478 0.00 0.00 0.00 4.17
443 444 5.652452 GCCCTGTTTTCTACTAATGGTGATT 59.348 40.000 0.00 0.00 0.00 2.57
445 446 6.884295 CCCTGTTTTCTACTAATGGTGATTGA 59.116 38.462 0.00 0.00 0.00 2.57
446 447 7.393234 CCCTGTTTTCTACTAATGGTGATTGAA 59.607 37.037 0.00 0.00 0.00 2.69
447 448 8.454106 CCTGTTTTCTACTAATGGTGATTGAAG 58.546 37.037 0.00 0.00 0.00 3.02
449 450 9.219603 TGTTTTCTACTAATGGTGATTGAAGAG 57.780 33.333 0.00 0.00 0.00 2.85
451 452 6.798427 TCTACTAATGGTGATTGAAGAGCT 57.202 37.500 0.00 0.00 0.00 4.09
452 453 7.187824 TCTACTAATGGTGATTGAAGAGCTT 57.812 36.000 0.00 0.00 0.00 3.74
453 454 7.624549 TCTACTAATGGTGATTGAAGAGCTTT 58.375 34.615 0.00 0.00 0.00 3.51
454 455 6.506500 ACTAATGGTGATTGAAGAGCTTTG 57.493 37.500 0.00 0.00 0.00 2.77
476 2611 7.718272 TTGTGTGATTAGTTAGGTTGTGTAC 57.282 36.000 0.00 0.00 0.00 2.90
626 2766 3.935203 CAGACCGCAATTATCTTGTGAGT 59.065 43.478 0.34 0.00 32.02 3.41
644 3018 4.624882 GTGAGTGAGTACTGCATTTCTCAG 59.375 45.833 12.65 0.00 37.25 3.35
645 3019 3.594134 AGTGAGTACTGCATTTCTCAGC 58.406 45.455 12.65 8.63 37.56 4.26
682 3062 9.971922 ACTATGATTTACCACGGTAATAACTAC 57.028 33.333 9.43 0.39 39.87 2.73
706 3091 2.266689 GCATTGCCTTTGCCCCAG 59.733 61.111 0.00 0.00 36.33 4.45
707 3092 2.983791 CATTGCCTTTGCCCCAGG 59.016 61.111 0.00 0.00 36.33 4.45
708 3093 2.284847 ATTGCCTTTGCCCCAGGG 60.285 61.111 0.00 0.00 36.33 4.45
709 3094 2.867508 ATTGCCTTTGCCCCAGGGA 61.868 57.895 7.25 0.00 37.50 4.20
710 3095 2.399600 ATTGCCTTTGCCCCAGGGAA 62.400 55.000 7.25 0.00 44.95 3.97
717 3102 0.476808 TTGCCCCAGGGAAGGAAGTA 60.477 55.000 7.25 0.00 37.50 2.24
718 3103 0.914417 TGCCCCAGGGAAGGAAGTAG 60.914 60.000 7.25 0.00 37.50 2.57
815 3206 4.821589 GCCGAGGCCCGACAGAAG 62.822 72.222 14.30 0.00 41.76 2.85
824 3215 1.587054 CCGACAGAAGAACCGCTCT 59.413 57.895 0.00 0.00 35.13 4.09
874 3266 2.506061 CCTCTGGCTCGGAGATGGG 61.506 68.421 9.69 0.00 39.05 4.00
1163 3607 1.370657 GCCGACCTAGCGAGATTCG 60.371 63.158 9.75 9.75 43.89 3.34
1180 3624 3.270092 GCCGCGCTTAACCTAGGC 61.270 66.667 9.30 4.05 37.61 3.93
1182 3626 1.591863 CCGCGCTTAACCTAGGCTC 60.592 63.158 9.30 0.00 0.00 4.70
1190 3634 1.486211 TAACCTAGGCTCAGAGCACC 58.514 55.000 24.09 7.65 44.75 5.01
1255 3699 2.433239 TCTGGCTCCGGTAGTATTTTCC 59.567 50.000 0.00 0.00 0.00 3.13
1262 3706 5.587388 TCCGGTAGTATTTTCCACAGTAG 57.413 43.478 0.00 0.00 0.00 2.57
1267 3711 7.983484 CCGGTAGTATTTTCCACAGTAGTTAAT 59.017 37.037 0.00 0.00 0.00 1.40
1268 3712 9.028185 CGGTAGTATTTTCCACAGTAGTTAATC 57.972 37.037 0.00 0.00 0.00 1.75
1269 3713 9.880157 GGTAGTATTTTCCACAGTAGTTAATCA 57.120 33.333 0.00 0.00 0.00 2.57
1288 3732 2.031163 GCTGTTGCTCTCCGTGGT 59.969 61.111 0.00 0.00 36.03 4.16
1289 3733 2.320587 GCTGTTGCTCTCCGTGGTG 61.321 63.158 0.00 0.00 36.03 4.17
1381 3840 2.690778 GGGCTGCGTCAACACCATC 61.691 63.158 0.00 0.00 0.00 3.51
1528 3987 4.972875 CAGTTCATGCCCCTCTCC 57.027 61.111 0.00 0.00 0.00 3.71
1591 4054 1.067142 CACCTGTACCGCACATACACT 60.067 52.381 0.00 0.00 36.29 3.55
1596 4059 4.202121 CCTGTACCGCACATACACTCTTAT 60.202 45.833 0.00 0.00 36.29 1.73
1608 4071 3.502920 ACACTCTTATTCGACGCTTCTG 58.497 45.455 0.00 0.00 0.00 3.02
1628 4091 3.018856 TGTCCATCCATGTTCATCTTGC 58.981 45.455 0.00 0.00 0.00 4.01
1630 4093 1.268896 CCATCCATGTTCATCTTGCGC 60.269 52.381 0.00 0.00 0.00 6.09
1633 4096 2.093890 TCCATGTTCATCTTGCGCAAT 58.906 42.857 25.26 6.90 0.00 3.56
1634 4097 3.277715 TCCATGTTCATCTTGCGCAATA 58.722 40.909 25.26 17.81 0.00 1.90
1672 4135 4.067913 GCCGCCATGGTTTGGGTG 62.068 66.667 14.67 0.00 46.55 4.61
1684 4147 1.398958 TTTGGGTGTTTGCTCTGGCC 61.399 55.000 0.00 0.00 37.74 5.36
1703 4166 1.957186 GCGAAACAGGTGCGGTACA 60.957 57.895 0.00 0.00 0.00 2.90
1727 4190 0.178941 GATAGAGGAAGGGGGCCGTA 60.179 60.000 0.00 0.00 0.00 4.02
1852 4315 1.938577 TGGCGCGTAAGTTGTTGTTAA 59.061 42.857 8.43 0.00 41.68 2.01
1853 4316 2.286301 TGGCGCGTAAGTTGTTGTTAAC 60.286 45.455 8.43 0.00 41.68 2.01
1854 4317 2.032636 GGCGCGTAAGTTGTTGTTAACT 60.033 45.455 8.43 0.00 42.43 2.24
1856 4319 3.416352 GCGCGTAAGTTGTTGTTAACTTG 59.584 43.478 8.43 0.72 46.98 3.16
1857 4320 3.416352 CGCGTAAGTTGTTGTTAACTTGC 59.584 43.478 12.65 10.61 46.98 4.01
1858 4321 4.344448 GCGTAAGTTGTTGTTAACTTGCA 58.656 39.130 15.90 0.51 46.75 4.08
1859 4322 4.436523 GCGTAAGTTGTTGTTAACTTGCAG 59.563 41.667 15.90 11.04 46.75 4.41
1860 4323 4.436523 CGTAAGTTGTTGTTAACTTGCAGC 59.563 41.667 15.90 5.46 46.75 5.25
1861 4324 4.718940 AAGTTGTTGTTAACTTGCAGCT 57.281 36.364 7.22 7.49 46.15 4.24
1862 4325 5.828299 AAGTTGTTGTTAACTTGCAGCTA 57.172 34.783 7.22 0.00 46.15 3.32
1863 4326 5.169836 AGTTGTTGTTAACTTGCAGCTAC 57.830 39.130 7.22 0.00 37.62 3.58
1864 4327 4.036380 AGTTGTTGTTAACTTGCAGCTACC 59.964 41.667 7.22 0.00 37.62 3.18
1865 4328 2.546368 TGTTGTTAACTTGCAGCTACCG 59.454 45.455 7.22 0.00 0.00 4.02
1866 4329 2.803956 GTTGTTAACTTGCAGCTACCGA 59.196 45.455 7.22 0.00 0.00 4.69
1867 4330 3.114668 TGTTAACTTGCAGCTACCGAA 57.885 42.857 7.22 0.00 0.00 4.30
1868 4331 3.670625 TGTTAACTTGCAGCTACCGAAT 58.329 40.909 7.22 0.00 0.00 3.34
1896 4359 4.024809 GCAGCTACCTTCATTCGGTAATTC 60.025 45.833 0.00 0.00 36.63 2.17
1938 4402 2.087646 GGATCCCTTTGTTGCTGACTC 58.912 52.381 0.00 0.00 0.00 3.36
1939 4403 1.734465 GATCCCTTTGTTGCTGACTCG 59.266 52.381 0.00 0.00 0.00 4.18
2001 4465 2.820197 GAGCTCTTTAAAGTTGGGGTGG 59.180 50.000 14.74 0.00 0.00 4.61
2045 4509 1.655329 CCTCGACCTCTACGCCATC 59.345 63.158 0.00 0.00 0.00 3.51
2066 4530 1.453155 CTGTGGACCCAAGAAATCCG 58.547 55.000 0.00 0.00 35.06 4.18
2083 4547 0.802222 CCGTATCGTGTGGCAGTCTG 60.802 60.000 0.00 0.00 0.00 3.51
2183 4647 0.750546 GCCCTCCGGGTTTGATTACC 60.751 60.000 0.00 0.00 46.51 2.85
2315 4779 5.176407 TCAACGATTTTAAGGTTGGTGTG 57.824 39.130 0.00 0.00 40.96 3.82
2474 4938 0.251354 TTGCCTCTGGATCAGACTGC 59.749 55.000 0.00 7.38 35.39 4.40
2534 4998 0.458543 TGCGAGCGATGAAAGGAGAC 60.459 55.000 0.00 0.00 0.00 3.36
2674 5138 5.532779 ACTTTGATGAGGTTTGTTCTCTTCC 59.467 40.000 0.00 0.00 35.70 3.46
2725 5189 5.467735 TGCTGATGATCATTACATTCTTCCG 59.532 40.000 10.14 0.00 0.00 4.30
2741 5205 4.250464 TCTTCCGTGCATAACTTGTTAGG 58.750 43.478 0.00 1.39 0.00 2.69
2742 5206 3.688694 TCCGTGCATAACTTGTTAGGT 57.311 42.857 6.96 0.00 0.00 3.08
2743 5207 4.010667 TCCGTGCATAACTTGTTAGGTT 57.989 40.909 6.96 0.00 0.00 3.50
2744 5208 5.149973 TCCGTGCATAACTTGTTAGGTTA 57.850 39.130 6.96 0.00 34.32 2.85
2745 5209 5.172934 TCCGTGCATAACTTGTTAGGTTAG 58.827 41.667 6.96 0.26 33.50 2.34
2764 5228 8.219660 AGGTTAGATATATGGCCTAATGTGTT 57.780 34.615 3.32 0.00 0.00 3.32
2768 5232 6.176183 AGATATATGGCCTAATGTGTTGAGC 58.824 40.000 3.32 0.00 0.00 4.26
2779 5243 0.524862 GTGTTGAGCAGGCCTGATTG 59.475 55.000 37.21 11.65 0.00 2.67
2783 5247 4.728110 AGCAGGCCTGATTGCGCA 62.728 61.111 37.21 5.66 44.80 6.09
2871 5335 4.621991 TCTCCTCTCGCACTTTAATATGC 58.378 43.478 2.13 2.13 38.52 3.14
2915 5379 1.761449 TGCAATGCGGAACCATATGT 58.239 45.000 0.00 0.00 0.00 2.29
2967 5441 3.248024 TCCATTTGGTCCAGTGTCTACT 58.752 45.455 0.00 0.00 35.32 2.57
2982 5456 3.134458 GTCTACTGCTTTGTGTTCTGCT 58.866 45.455 0.00 0.00 0.00 4.24
2985 5459 3.155093 ACTGCTTTGTGTTCTGCTTTG 57.845 42.857 0.00 0.00 0.00 2.77
3020 5499 2.363306 TGTTGTGACAGGGCTGAAAT 57.637 45.000 0.00 0.00 0.00 2.17
3025 5504 4.835284 TGTGACAGGGCTGAAATACATA 57.165 40.909 0.00 0.00 0.00 2.29
3034 5513 4.941263 GGGCTGAAATACATACACAAGTCA 59.059 41.667 0.00 0.00 0.00 3.41
3043 5522 9.618890 AAATACATACACAAGTCATATCTTGCT 57.381 29.630 6.38 0.00 45.86 3.91
3132 5626 8.306761 ACATGTGGATTTTCTACCTTTTGATTC 58.693 33.333 0.00 0.00 0.00 2.52
3142 5636 6.418101 TCTACCTTTTGATTCTGATGAAGGG 58.582 40.000 5.10 0.00 38.32 3.95
3375 5869 1.661821 GACGGAGATTCGGGCGATG 60.662 63.158 0.00 0.00 0.00 3.84
3376 5870 2.356313 CGGAGATTCGGGCGATGG 60.356 66.667 0.00 0.00 0.00 3.51
3377 5871 2.856628 CGGAGATTCGGGCGATGGA 61.857 63.158 0.00 0.00 0.00 3.41
3415 5909 4.812476 CGGCGCCGAAGACATGGA 62.812 66.667 44.86 0.00 42.83 3.41
3416 5910 3.195698 GGCGCCGAAGACATGGAC 61.196 66.667 12.58 0.00 0.00 4.02
3417 5911 3.554692 GCGCCGAAGACATGGACG 61.555 66.667 0.00 0.00 0.00 4.79
3452 5946 1.301009 GTAGCGGCCTCATAGCACC 60.301 63.158 0.00 0.00 0.00 5.01
3454 5948 4.937431 GCGGCCTCATAGCACCCC 62.937 72.222 0.00 0.00 0.00 4.95
3456 5950 2.746375 CGGCCTCATAGCACCCCTT 61.746 63.158 0.00 0.00 0.00 3.95
3459 5953 0.108774 GCCTCATAGCACCCCTTACC 59.891 60.000 0.00 0.00 0.00 2.85
3460 5954 1.507140 CCTCATAGCACCCCTTACCA 58.493 55.000 0.00 0.00 0.00 3.25
3462 5956 2.119495 CTCATAGCACCCCTTACCAGT 58.881 52.381 0.00 0.00 0.00 4.00
3463 5957 2.505819 CTCATAGCACCCCTTACCAGTT 59.494 50.000 0.00 0.00 0.00 3.16
3466 5960 0.989602 AGCACCCCTTACCAGTTACC 59.010 55.000 0.00 0.00 0.00 2.85
3467 5961 0.989602 GCACCCCTTACCAGTTACCT 59.010 55.000 0.00 0.00 0.00 3.08
3468 5962 1.065636 GCACCCCTTACCAGTTACCTC 60.066 57.143 0.00 0.00 0.00 3.85
3469 5963 2.262637 CACCCCTTACCAGTTACCTCA 58.737 52.381 0.00 0.00 0.00 3.86
3470 5964 2.640826 CACCCCTTACCAGTTACCTCAA 59.359 50.000 0.00 0.00 0.00 3.02
3471 5965 3.073356 CACCCCTTACCAGTTACCTCAAA 59.927 47.826 0.00 0.00 0.00 2.69
3472 5966 3.073503 ACCCCTTACCAGTTACCTCAAAC 59.926 47.826 0.00 0.00 0.00 2.93
3473 5967 3.073356 CCCCTTACCAGTTACCTCAAACA 59.927 47.826 0.00 0.00 0.00 2.83
3474 5968 4.446600 CCCCTTACCAGTTACCTCAAACAA 60.447 45.833 0.00 0.00 0.00 2.83
3475 5969 4.760204 CCCTTACCAGTTACCTCAAACAAG 59.240 45.833 0.00 0.00 0.00 3.16
3476 5970 4.760204 CCTTACCAGTTACCTCAAACAAGG 59.240 45.833 0.00 0.00 42.55 3.61
3477 5971 3.223674 ACCAGTTACCTCAAACAAGGG 57.776 47.619 0.00 0.00 41.04 3.95
3478 5972 2.512476 ACCAGTTACCTCAAACAAGGGT 59.488 45.455 0.00 0.00 41.04 4.34
3497 5991 2.114411 GGCGTCCTTTTGACCCCA 59.886 61.111 0.00 0.00 40.96 4.96
3498 5992 2.265904 GGCGTCCTTTTGACCCCAC 61.266 63.158 0.00 0.00 40.96 4.61
3499 5993 1.527380 GCGTCCTTTTGACCCCACA 60.527 57.895 0.00 0.00 41.18 4.17
3500 5994 1.515521 GCGTCCTTTTGACCCCACAG 61.516 60.000 0.00 0.00 41.18 3.66
3501 5995 1.515521 CGTCCTTTTGACCCCACAGC 61.516 60.000 0.00 0.00 41.18 4.40
3502 5996 0.467290 GTCCTTTTGACCCCACAGCA 60.467 55.000 0.00 0.00 38.09 4.41
3503 5997 0.482446 TCCTTTTGACCCCACAGCAT 59.518 50.000 0.00 0.00 0.00 3.79
3504 5998 1.133199 TCCTTTTGACCCCACAGCATT 60.133 47.619 0.00 0.00 0.00 3.56
3505 5999 2.109128 TCCTTTTGACCCCACAGCATTA 59.891 45.455 0.00 0.00 0.00 1.90
3506 6000 2.493278 CCTTTTGACCCCACAGCATTAG 59.507 50.000 0.00 0.00 0.00 1.73
3507 6001 1.544724 TTTGACCCCACAGCATTAGC 58.455 50.000 0.00 0.00 42.56 3.09
3531 6026 3.708451 TCTTGTACATAGGCACTCTCCA 58.292 45.455 0.00 0.00 41.75 3.86
3553 6048 2.093447 GTCCAGGATAGTTGAGTGGTGG 60.093 54.545 0.00 0.00 0.00 4.61
3555 6050 2.355108 CCAGGATAGTTGAGTGGTGGTG 60.355 54.545 0.00 0.00 0.00 4.17
3556 6051 2.567169 CAGGATAGTTGAGTGGTGGTGA 59.433 50.000 0.00 0.00 0.00 4.02
3557 6052 3.198635 CAGGATAGTTGAGTGGTGGTGAT 59.801 47.826 0.00 0.00 0.00 3.06
3558 6053 4.405680 CAGGATAGTTGAGTGGTGGTGATA 59.594 45.833 0.00 0.00 0.00 2.15
3559 6054 4.651503 AGGATAGTTGAGTGGTGGTGATAG 59.348 45.833 0.00 0.00 0.00 2.08
3560 6055 4.406003 GGATAGTTGAGTGGTGGTGATAGT 59.594 45.833 0.00 0.00 0.00 2.12
3561 6056 3.685139 AGTTGAGTGGTGGTGATAGTG 57.315 47.619 0.00 0.00 0.00 2.74
3660 6158 5.157781 AGAAAGAAAGAAGACGACGATGAG 58.842 41.667 0.00 0.00 0.00 2.90
3684 6182 3.156879 CGGTTTCGCGCGCTTTTC 61.157 61.111 30.48 16.18 0.00 2.29
3741 6241 6.155475 TGAATTTCGTTTGAATTTCCCACT 57.845 33.333 9.05 0.00 40.92 4.00
3756 6256 4.447138 TCCCACTGTTTGGTGATAACTT 57.553 40.909 0.00 0.00 45.25 2.66
3757 6257 5.570205 TCCCACTGTTTGGTGATAACTTA 57.430 39.130 0.00 0.00 45.25 2.24
3758 6258 6.134535 TCCCACTGTTTGGTGATAACTTAT 57.865 37.500 0.00 0.00 45.25 1.73
3759 6259 6.548321 TCCCACTGTTTGGTGATAACTTATT 58.452 36.000 0.00 0.00 45.25 1.40
3760 6260 7.691213 TCCCACTGTTTGGTGATAACTTATTA 58.309 34.615 0.00 0.00 45.25 0.98
3761 6261 8.333235 TCCCACTGTTTGGTGATAACTTATTAT 58.667 33.333 0.00 0.00 45.25 1.28
3762 6262 8.966868 CCCACTGTTTGGTGATAACTTATTATT 58.033 33.333 0.00 0.00 45.25 1.40
3818 6319 2.164219 GACTTCAGAGAGCTCCTGTGAG 59.836 54.545 23.28 22.31 44.62 3.51
3821 6322 1.074566 TCAGAGAGCTCCTGTGAGTGA 59.925 52.381 23.28 9.86 39.88 3.41
3841 6350 2.125753 CGGCTCTGAGGCTGACAC 60.126 66.667 25.94 0.00 40.74 3.67
3889 6398 4.899239 GCGCTGATCCTCACCCCG 62.899 72.222 0.00 0.00 0.00 5.73
3933 6442 2.440539 TCGCTTCTCTTTCACCAGTC 57.559 50.000 0.00 0.00 0.00 3.51
3981 6495 3.631127 GAATCTTCTCGCCGCCGC 61.631 66.667 0.00 0.00 0.00 6.53
4128 6642 2.728435 CGCACCACCCTACCCCTAC 61.728 68.421 0.00 0.00 0.00 3.18
4133 6647 1.074699 CACCCTACCCCTACCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
4165 6687 2.979676 TTTCTGCTGCCGGTGCTG 60.980 61.111 19.25 18.32 38.71 4.41
4251 6779 2.338015 CGGTCTTCGTCTTCGGGGA 61.338 63.158 0.00 0.00 37.69 4.81
4252 6780 1.511768 GGTCTTCGTCTTCGGGGAG 59.488 63.158 0.00 0.00 37.69 4.30
4253 6781 1.153804 GTCTTCGTCTTCGGGGAGC 60.154 63.158 0.00 0.00 37.69 4.70
4254 6782 2.202623 CTTCGTCTTCGGGGAGCG 60.203 66.667 0.00 0.00 37.69 5.03
4255 6783 4.430765 TTCGTCTTCGGGGAGCGC 62.431 66.667 0.00 0.00 37.69 5.92
4333 6861 4.060038 CAAGGTACGGACGGCGGT 62.060 66.667 13.24 6.72 0.00 5.68
4349 6886 3.964875 GTGGCGGTGCTTGTGGTG 61.965 66.667 0.00 0.00 0.00 4.17
4350 6887 4.497984 TGGCGGTGCTTGTGGTGT 62.498 61.111 0.00 0.00 0.00 4.16
4358 6898 0.678950 TGCTTGTGGTGTCGATCTCA 59.321 50.000 0.00 0.00 0.00 3.27
4359 6899 1.276138 TGCTTGTGGTGTCGATCTCAT 59.724 47.619 0.00 0.00 0.00 2.90
4366 6906 2.302260 GGTGTCGATCTCATCCTCTGA 58.698 52.381 0.00 0.00 0.00 3.27
4378 6918 2.105128 CTCTGACCACGCGATCCC 59.895 66.667 15.93 0.00 0.00 3.85
4401 6941 0.107214 CGCCTTCCCCTGATTTGCTA 60.107 55.000 0.00 0.00 0.00 3.49
4402 6942 1.681780 CGCCTTCCCCTGATTTGCTAA 60.682 52.381 0.00 0.00 0.00 3.09
4408 6948 3.430453 TCCCCTGATTTGCTAAGTTTGG 58.570 45.455 0.00 0.00 0.00 3.28
4413 6953 4.378459 CCTGATTTGCTAAGTTTGGTCGTC 60.378 45.833 0.00 0.00 0.00 4.20
4427 6967 1.598924 GGTCGTCCGATTTAGCCTACG 60.599 57.143 0.00 0.00 0.00 3.51
4428 6968 0.029834 TCGTCCGATTTAGCCTACGC 59.970 55.000 0.00 0.00 0.00 4.42
4429 6969 1.266786 CGTCCGATTTAGCCTACGCG 61.267 60.000 3.53 3.53 41.18 6.01
4430 6970 0.248784 GTCCGATTTAGCCTACGCGT 60.249 55.000 19.17 19.17 41.18 6.01
4431 6971 0.029834 TCCGATTTAGCCTACGCGTC 59.970 55.000 18.63 0.16 41.18 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.151502 TCTCCTCTCGAAGCTCCATT 57.848 50.000 0.00 0.00 0.00 3.16
1 2 2.151502 TTCTCCTCTCGAAGCTCCAT 57.848 50.000 0.00 0.00 0.00 3.41
3 4 1.470805 GCTTTCTCCTCTCGAAGCTCC 60.471 57.143 0.00 0.00 0.00 4.70
5 6 1.555967 AGCTTTCTCCTCTCGAAGCT 58.444 50.000 3.79 3.79 0.00 3.74
6 7 2.378445 AAGCTTTCTCCTCTCGAAGC 57.622 50.000 0.00 0.00 0.00 3.86
7 8 5.066968 AGTTAAGCTTTCTCCTCTCGAAG 57.933 43.478 3.20 0.00 0.00 3.79
9 10 5.124138 CACTAGTTAAGCTTTCTCCTCTCGA 59.876 44.000 3.20 0.00 0.00 4.04
11 12 6.096695 CACACTAGTTAAGCTTTCTCCTCTC 58.903 44.000 3.20 0.00 0.00 3.20
12 13 5.540719 ACACACTAGTTAAGCTTTCTCCTCT 59.459 40.000 3.20 0.00 0.00 3.69
15 16 5.785243 AGACACACTAGTTAAGCTTTCTCC 58.215 41.667 3.20 0.00 0.00 3.71
16 17 5.569823 CGAGACACACTAGTTAAGCTTTCTC 59.430 44.000 3.20 5.85 0.00 2.87
17 18 5.462405 CGAGACACACTAGTTAAGCTTTCT 58.538 41.667 3.20 6.68 0.00 2.52
18 19 4.621886 CCGAGACACACTAGTTAAGCTTTC 59.378 45.833 3.20 0.00 0.00 2.62
19 20 4.557205 CCGAGACACACTAGTTAAGCTTT 58.443 43.478 3.20 0.00 0.00 3.51
20 21 3.056749 CCCGAGACACACTAGTTAAGCTT 60.057 47.826 3.48 3.48 0.00 3.74
21 22 2.492484 CCCGAGACACACTAGTTAAGCT 59.508 50.000 0.00 0.00 0.00 3.74
22 23 2.877335 CCCGAGACACACTAGTTAAGC 58.123 52.381 0.00 0.00 0.00 3.09
23 24 2.230508 TGCCCGAGACACACTAGTTAAG 59.769 50.000 0.00 0.00 0.00 1.85
26 27 1.267121 ATGCCCGAGACACACTAGTT 58.733 50.000 0.00 0.00 0.00 2.24
27 28 1.267121 AATGCCCGAGACACACTAGT 58.733 50.000 0.00 0.00 0.00 2.57
30 31 0.396435 TGAAATGCCCGAGACACACT 59.604 50.000 0.00 0.00 0.00 3.55
32 33 1.737838 GATGAAATGCCCGAGACACA 58.262 50.000 0.00 0.00 0.00 3.72
33 34 0.652592 CGATGAAATGCCCGAGACAC 59.347 55.000 0.00 0.00 0.00 3.67
34 35 0.534873 TCGATGAAATGCCCGAGACA 59.465 50.000 0.00 0.00 0.00 3.41
35 36 1.327764 GTTCGATGAAATGCCCGAGAC 59.672 52.381 0.00 0.00 32.41 3.36
36 37 1.066502 TGTTCGATGAAATGCCCGAGA 60.067 47.619 0.00 0.00 32.41 4.04
38 39 1.083489 GTGTTCGATGAAATGCCCGA 58.917 50.000 0.00 0.00 0.00 5.14
39 40 1.086696 AGTGTTCGATGAAATGCCCG 58.913 50.000 0.00 0.00 0.00 6.13
40 41 2.487762 TGAAGTGTTCGATGAAATGCCC 59.512 45.455 0.00 0.00 0.00 5.36
57 58 3.464907 CTCACCTCCTATGCACATGAAG 58.535 50.000 0.00 0.00 0.00 3.02
58 59 2.420547 GCTCACCTCCTATGCACATGAA 60.421 50.000 0.00 0.00 0.00 2.57
59 60 1.139654 GCTCACCTCCTATGCACATGA 59.860 52.381 0.00 0.00 0.00 3.07
60 61 1.140452 AGCTCACCTCCTATGCACATG 59.860 52.381 0.00 0.00 0.00 3.21
61 62 1.504912 AGCTCACCTCCTATGCACAT 58.495 50.000 0.00 0.00 0.00 3.21
62 63 2.034878 CTAGCTCACCTCCTATGCACA 58.965 52.381 0.00 0.00 0.00 4.57
63 64 2.295909 CTCTAGCTCACCTCCTATGCAC 59.704 54.545 0.00 0.00 0.00 4.57
64 65 2.591923 CTCTAGCTCACCTCCTATGCA 58.408 52.381 0.00 0.00 0.00 3.96
66 67 2.295909 GTGCTCTAGCTCACCTCCTATG 59.704 54.545 3.26 0.00 42.66 2.23
67 68 2.593026 GTGCTCTAGCTCACCTCCTAT 58.407 52.381 3.26 0.00 42.66 2.57
68 69 1.410365 GGTGCTCTAGCTCACCTCCTA 60.410 57.143 19.69 0.00 46.90 2.94
70 71 1.819905 GGTGCTCTAGCTCACCTCC 59.180 63.158 19.69 0.00 46.90 4.30
74 75 2.012673 CATTTGGGTGCTCTAGCTCAC 58.987 52.381 3.26 1.23 42.66 3.51
76 77 1.020437 GCATTTGGGTGCTCTAGCTC 58.980 55.000 3.26 0.00 41.82 4.09
82 83 2.054453 GGAGGGCATTTGGGTGCTC 61.054 63.158 0.00 0.00 46.05 4.26
84 85 3.076916 GGGAGGGCATTTGGGTGC 61.077 66.667 0.00 0.00 44.31 5.01
87 88 2.280079 GAGGGGAGGGCATTTGGG 59.720 66.667 0.00 0.00 0.00 4.12
89 90 2.830370 GCGAGGGGAGGGCATTTG 60.830 66.667 0.00 0.00 0.00 2.32
90 91 4.129148 GGCGAGGGGAGGGCATTT 62.129 66.667 0.00 0.00 0.00 2.32
100 101 4.715523 TTTTCTGGCCGGCGAGGG 62.716 66.667 34.26 14.73 41.48 4.30
118 119 2.896801 CGCGGCAGAGCACTTTGTT 61.897 57.895 0.00 0.00 36.85 2.83
119 120 3.349006 CGCGGCAGAGCACTTTGT 61.349 61.111 0.00 0.00 36.85 2.83
120 121 4.093952 CCGCGGCAGAGCACTTTG 62.094 66.667 14.67 0.00 36.85 2.77
130 131 1.596895 TATATACCATCGCCGCGGCA 61.597 55.000 45.26 33.00 42.06 5.69
132 133 2.351447 CCTATATATACCATCGCCGCGG 60.351 54.545 24.05 24.05 0.00 6.46
133 134 2.921069 GCCTATATATACCATCGCCGCG 60.921 54.545 6.39 6.39 0.00 6.46
134 135 2.035449 TGCCTATATATACCATCGCCGC 59.965 50.000 0.00 0.00 0.00 6.53
135 136 4.049186 GTTGCCTATATATACCATCGCCG 58.951 47.826 0.00 0.00 0.00 6.46
137 138 8.888579 AATAAGTTGCCTATATATACCATCGC 57.111 34.615 0.00 0.00 0.00 4.58
141 142 9.953565 GGACAAATAAGTTGCCTATATATACCA 57.046 33.333 0.00 0.00 41.31 3.25
142 143 9.392259 GGGACAAATAAGTTGCCTATATATACC 57.608 37.037 0.00 0.00 41.31 2.73
143 144 9.095065 CGGGACAAATAAGTTGCCTATATATAC 57.905 37.037 0.00 0.00 41.31 1.47
144 145 8.262227 CCGGGACAAATAAGTTGCCTATATATA 58.738 37.037 0.00 0.00 41.31 0.86
145 146 7.110155 CCGGGACAAATAAGTTGCCTATATAT 58.890 38.462 0.00 0.00 41.31 0.86
146 147 6.043474 ACCGGGACAAATAAGTTGCCTATATA 59.957 38.462 6.32 0.00 41.31 0.86
148 149 4.164604 ACCGGGACAAATAAGTTGCCTATA 59.835 41.667 6.32 0.00 41.31 1.31
149 150 3.053917 ACCGGGACAAATAAGTTGCCTAT 60.054 43.478 6.32 0.00 41.31 2.57
150 151 2.306512 ACCGGGACAAATAAGTTGCCTA 59.693 45.455 6.32 0.00 41.31 3.93
151 152 1.074889 ACCGGGACAAATAAGTTGCCT 59.925 47.619 6.32 0.00 41.31 4.75
153 154 2.554893 TGAACCGGGACAAATAAGTTGC 59.445 45.455 6.32 0.00 41.31 4.17
154 155 4.380444 CCATGAACCGGGACAAATAAGTTG 60.380 45.833 6.32 0.00 43.43 3.16
155 156 3.761752 CCATGAACCGGGACAAATAAGTT 59.238 43.478 6.32 0.00 0.00 2.66
156 157 3.352648 CCATGAACCGGGACAAATAAGT 58.647 45.455 6.32 0.00 0.00 2.24
157 158 2.099098 GCCATGAACCGGGACAAATAAG 59.901 50.000 6.32 0.00 0.00 1.73
158 159 2.096248 GCCATGAACCGGGACAAATAA 58.904 47.619 6.32 0.00 0.00 1.40
159 160 1.004862 TGCCATGAACCGGGACAAATA 59.995 47.619 6.32 0.00 0.00 1.40
160 161 0.251564 TGCCATGAACCGGGACAAAT 60.252 50.000 6.32 0.00 0.00 2.32
161 162 0.251564 ATGCCATGAACCGGGACAAA 60.252 50.000 6.32 0.00 0.00 2.83
162 163 0.251564 AATGCCATGAACCGGGACAA 60.252 50.000 6.32 0.00 0.00 3.18
163 164 0.621082 TAATGCCATGAACCGGGACA 59.379 50.000 6.32 5.75 0.00 4.02
164 165 1.404035 GTTAATGCCATGAACCGGGAC 59.596 52.381 6.32 0.00 0.00 4.46
166 167 0.744281 GGTTAATGCCATGAACCGGG 59.256 55.000 8.23 0.00 33.75 5.73
170 171 1.404035 GTCCCGGTTAATGCCATGAAC 59.596 52.381 0.00 0.00 0.00 3.18
172 173 0.916086 AGTCCCGGTTAATGCCATGA 59.084 50.000 0.00 0.00 0.00 3.07
175 176 3.655615 ATTTAGTCCCGGTTAATGCCA 57.344 42.857 0.00 0.00 0.00 4.92
176 177 3.317149 GGAATTTAGTCCCGGTTAATGCC 59.683 47.826 0.00 0.00 0.00 4.40
177 178 4.204799 AGGAATTTAGTCCCGGTTAATGC 58.795 43.478 0.00 0.00 38.59 3.56
179 180 4.725304 AGGAGGAATTTAGTCCCGGTTAAT 59.275 41.667 0.00 0.00 38.59 1.40
180 181 4.106324 AGGAGGAATTTAGTCCCGGTTAA 58.894 43.478 0.00 0.00 38.59 2.01
181 182 3.727948 AGGAGGAATTTAGTCCCGGTTA 58.272 45.455 0.00 0.00 38.59 2.85
182 183 2.558974 AGGAGGAATTTAGTCCCGGTT 58.441 47.619 0.00 0.00 38.59 4.44
185 186 5.810080 ATAGAAGGAGGAATTTAGTCCCG 57.190 43.478 0.00 0.00 38.59 5.14
187 188 6.295180 CCGGTATAGAAGGAGGAATTTAGTCC 60.295 46.154 0.00 0.00 38.03 3.85
188 189 6.267242 ACCGGTATAGAAGGAGGAATTTAGTC 59.733 42.308 4.49 0.00 0.00 2.59
189 190 6.141790 ACCGGTATAGAAGGAGGAATTTAGT 58.858 40.000 4.49 0.00 0.00 2.24
190 191 6.667558 ACCGGTATAGAAGGAGGAATTTAG 57.332 41.667 4.49 0.00 0.00 1.85
191 192 6.612456 TGAACCGGTATAGAAGGAGGAATTTA 59.388 38.462 8.00 0.00 0.00 1.40
193 194 4.966805 TGAACCGGTATAGAAGGAGGAATT 59.033 41.667 8.00 0.00 0.00 2.17
194 195 4.553678 TGAACCGGTATAGAAGGAGGAAT 58.446 43.478 8.00 0.00 0.00 3.01
196 197 3.675348 TGAACCGGTATAGAAGGAGGA 57.325 47.619 8.00 0.00 0.00 3.71
198 199 3.555168 GCCATGAACCGGTATAGAAGGAG 60.555 52.174 8.00 0.00 0.00 3.69
199 200 2.367567 GCCATGAACCGGTATAGAAGGA 59.632 50.000 8.00 0.00 0.00 3.36
201 202 3.131396 GTGCCATGAACCGGTATAGAAG 58.869 50.000 8.00 0.00 0.00 2.85
202 203 2.482316 CGTGCCATGAACCGGTATAGAA 60.482 50.000 8.00 0.00 0.00 2.10
203 204 1.067974 CGTGCCATGAACCGGTATAGA 59.932 52.381 8.00 0.00 0.00 1.98
205 206 1.112950 TCGTGCCATGAACCGGTATA 58.887 50.000 8.00 0.00 0.00 1.47
206 207 0.250793 TTCGTGCCATGAACCGGTAT 59.749 50.000 8.00 0.00 0.00 2.73
207 208 0.671163 GTTCGTGCCATGAACCGGTA 60.671 55.000 17.21 0.00 37.98 4.02
208 209 1.964373 GTTCGTGCCATGAACCGGT 60.964 57.895 17.21 0.00 37.98 5.28
209 210 2.867472 GTTCGTGCCATGAACCGG 59.133 61.111 17.21 0.00 37.98 5.28
212 213 0.671163 TACCGGTTCGTGCCATGAAC 60.671 55.000 15.04 19.30 42.00 3.18
214 215 0.179094 GATACCGGTTCGTGCCATGA 60.179 55.000 15.04 0.00 0.00 3.07
216 217 0.250793 TTGATACCGGTTCGTGCCAT 59.749 50.000 15.04 0.00 0.00 4.40
217 218 0.250793 ATTGATACCGGTTCGTGCCA 59.749 50.000 15.04 0.00 0.00 4.92
218 219 0.655733 CATTGATACCGGTTCGTGCC 59.344 55.000 15.04 0.00 0.00 5.01
219 220 0.655733 CCATTGATACCGGTTCGTGC 59.344 55.000 15.04 0.00 0.00 5.34
220 221 0.655733 GCCATTGATACCGGTTCGTG 59.344 55.000 15.04 12.49 0.00 4.35
221 222 0.539986 AGCCATTGATACCGGTTCGT 59.460 50.000 15.04 0.00 0.00 3.85
224 225 1.681780 CCACAGCCATTGATACCGGTT 60.682 52.381 15.04 0.00 0.00 4.44
227 228 1.299541 GACCACAGCCATTGATACCG 58.700 55.000 0.00 0.00 0.00 4.02
228 229 1.064758 TGGACCACAGCCATTGATACC 60.065 52.381 0.00 0.00 0.00 2.73
229 230 2.292267 CTGGACCACAGCCATTGATAC 58.708 52.381 0.00 0.00 40.97 2.24
230 231 1.212688 CCTGGACCACAGCCATTGATA 59.787 52.381 0.00 0.00 46.14 2.15
231 232 0.033796 CCTGGACCACAGCCATTGAT 60.034 55.000 0.00 0.00 46.14 2.57
232 233 1.133181 TCCTGGACCACAGCCATTGA 61.133 55.000 0.00 0.00 46.14 2.57
233 234 0.679002 CTCCTGGACCACAGCCATTG 60.679 60.000 0.00 0.00 46.14 2.82
234 235 1.687612 CTCCTGGACCACAGCCATT 59.312 57.895 0.00 0.00 46.14 3.16
235 236 2.976490 GCTCCTGGACCACAGCCAT 61.976 63.158 8.93 0.00 46.14 4.40
236 237 3.640407 GCTCCTGGACCACAGCCA 61.640 66.667 8.93 0.00 46.14 4.75
237 238 4.767255 CGCTCCTGGACCACAGCC 62.767 72.222 13.08 0.00 46.14 4.85
238 239 4.008933 ACGCTCCTGGACCACAGC 62.009 66.667 9.81 9.81 46.14 4.40
241 242 3.311110 TCCACGCTCCTGGACCAC 61.311 66.667 0.00 0.00 35.23 4.16
246 247 1.746615 CAATGGTCCACGCTCCTGG 60.747 63.158 0.00 0.00 0.00 4.45
248 249 0.179000 GATCAATGGTCCACGCTCCT 59.821 55.000 0.00 0.00 0.00 3.69
250 251 0.815615 GGGATCAATGGTCCACGCTC 60.816 60.000 15.29 0.00 37.49 5.03
251 252 1.224592 GGGATCAATGGTCCACGCT 59.775 57.895 15.29 0.00 37.49 5.07
252 253 2.180204 CGGGATCAATGGTCCACGC 61.180 63.158 15.29 0.00 37.49 5.34
253 254 1.523711 CCGGGATCAATGGTCCACG 60.524 63.158 15.29 14.49 37.49 4.94
255 256 0.254747 GAACCGGGATCAATGGTCCA 59.745 55.000 15.29 0.00 37.49 4.02
256 257 0.814010 CGAACCGGGATCAATGGTCC 60.814 60.000 6.32 3.39 34.11 4.46
258 259 0.392461 CACGAACCGGGATCAATGGT 60.392 55.000 6.32 0.00 37.68 3.55
259 260 1.714899 GCACGAACCGGGATCAATGG 61.715 60.000 6.32 0.00 28.17 3.16
260 261 1.714899 GGCACGAACCGGGATCAATG 61.715 60.000 6.32 6.42 28.17 2.82
262 263 1.259142 TAGGCACGAACCGGGATCAA 61.259 55.000 6.32 0.00 28.17 2.57
263 264 1.672854 CTAGGCACGAACCGGGATCA 61.673 60.000 6.32 0.00 28.17 2.92
264 265 1.067582 CTAGGCACGAACCGGGATC 59.932 63.158 6.32 2.37 28.17 3.36
266 267 1.607178 TTCTAGGCACGAACCGGGA 60.607 57.895 6.32 0.00 28.17 5.14
267 268 1.447314 GTTCTAGGCACGAACCGGG 60.447 63.158 6.32 0.00 35.81 5.73
268 269 4.180496 GTTCTAGGCACGAACCGG 57.820 61.111 0.00 0.00 35.81 5.28
271 272 1.447314 CCCGGTTCTAGGCACGAAC 60.447 63.158 0.00 9.57 39.92 3.95
272 273 1.607178 TCCCGGTTCTAGGCACGAA 60.607 57.895 0.00 0.00 0.00 3.85
273 274 2.036098 TCCCGGTTCTAGGCACGA 59.964 61.111 0.00 0.00 0.00 4.35
274 275 2.162338 TTGTCCCGGTTCTAGGCACG 62.162 60.000 0.00 0.00 0.00 5.34
275 276 0.035739 TTTGTCCCGGTTCTAGGCAC 59.964 55.000 0.00 0.00 0.00 5.01
276 277 0.988832 ATTTGTCCCGGTTCTAGGCA 59.011 50.000 0.00 0.00 0.00 4.75
278 279 1.557832 TCCATTTGTCCCGGTTCTAGG 59.442 52.381 0.00 0.00 0.00 3.02
279 280 3.467803 GATCCATTTGTCCCGGTTCTAG 58.532 50.000 0.00 0.00 0.00 2.43
281 282 1.064685 GGATCCATTTGTCCCGGTTCT 60.065 52.381 6.95 0.00 0.00 3.01
282 283 1.389555 GGATCCATTTGTCCCGGTTC 58.610 55.000 6.95 0.00 0.00 3.62
283 284 0.033503 GGGATCCATTTGTCCCGGTT 60.034 55.000 15.23 0.00 44.30 4.44
284 285 1.613061 GGGATCCATTTGTCCCGGT 59.387 57.895 15.23 0.00 44.30 5.28
285 286 4.579127 GGGATCCATTTGTCCCGG 57.421 61.111 15.23 0.00 44.30 5.73
288 289 3.203716 GTTCGTAGGGATCCATTTGTCC 58.796 50.000 15.23 0.00 0.00 4.02
290 291 2.419574 CGGTTCGTAGGGATCCATTTGT 60.420 50.000 15.23 0.00 34.67 2.83
291 292 2.210116 CGGTTCGTAGGGATCCATTTG 58.790 52.381 15.23 2.44 34.67 2.32
292 293 1.140252 CCGGTTCGTAGGGATCCATTT 59.860 52.381 15.23 0.65 34.67 2.32
293 294 0.756903 CCGGTTCGTAGGGATCCATT 59.243 55.000 15.23 3.45 34.67 3.16
294 295 2.437625 CCGGTTCGTAGGGATCCAT 58.562 57.895 15.23 9.63 34.67 3.41
295 296 3.944123 CCGGTTCGTAGGGATCCA 58.056 61.111 15.23 0.00 34.67 3.41
301 302 0.461339 CATTGGTCCCGGTTCGTAGG 60.461 60.000 0.00 0.00 0.00 3.18
302 303 1.087771 GCATTGGTCCCGGTTCGTAG 61.088 60.000 0.00 0.00 0.00 3.51
304 305 2.359478 GCATTGGTCCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
305 306 3.131478 GGCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
306 307 2.754254 GGGCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 33.43 3.62
307 308 3.585428 TGGGCATTGGTCCCGGTT 61.585 61.111 0.00 0.00 46.92 4.44
311 312 2.438434 CTCGTGGGCATTGGTCCC 60.438 66.667 0.00 0.00 44.17 4.46
312 313 2.438434 CCTCGTGGGCATTGGTCC 60.438 66.667 0.00 0.00 40.08 4.46
334 335 3.403558 GAGTCCAGGGGGTCAGCC 61.404 72.222 0.00 0.00 34.93 4.85
335 336 1.997874 ATGAGTCCAGGGGGTCAGC 60.998 63.158 0.00 0.00 34.93 4.26
336 337 0.618680 TCATGAGTCCAGGGGGTCAG 60.619 60.000 0.00 0.00 34.93 3.51
337 338 0.178876 TTCATGAGTCCAGGGGGTCA 60.179 55.000 0.00 0.00 34.93 4.02
338 339 0.253327 GTTCATGAGTCCAGGGGGTC 59.747 60.000 0.00 0.00 34.93 4.46
339 340 0.178861 AGTTCATGAGTCCAGGGGGT 60.179 55.000 0.00 0.00 34.93 4.95
340 341 0.254178 CAGTTCATGAGTCCAGGGGG 59.746 60.000 0.00 0.00 0.00 5.40
341 342 0.254178 CCAGTTCATGAGTCCAGGGG 59.746 60.000 0.00 0.00 0.00 4.79
342 343 0.254178 CCCAGTTCATGAGTCCAGGG 59.746 60.000 0.00 4.88 0.00 4.45
343 344 0.987294 ACCCAGTTCATGAGTCCAGG 59.013 55.000 0.00 0.00 0.00 4.45
346 347 4.446371 CATTAGACCCAGTTCATGAGTCC 58.554 47.826 8.08 0.00 0.00 3.85
347 348 3.873952 GCATTAGACCCAGTTCATGAGTC 59.126 47.826 0.00 0.00 0.00 3.36
348 349 3.370953 GGCATTAGACCCAGTTCATGAGT 60.371 47.826 0.00 0.00 0.00 3.41
350 351 3.281727 GGCATTAGACCCAGTTCATGA 57.718 47.619 0.00 0.00 0.00 3.07
361 362 2.325583 TCACGAATGGGGCATTAGAC 57.674 50.000 0.00 0.00 33.90 2.59
362 363 2.503765 TCTTCACGAATGGGGCATTAGA 59.496 45.455 0.00 0.00 33.90 2.10
363 364 2.917933 TCTTCACGAATGGGGCATTAG 58.082 47.619 0.00 0.00 33.90 1.73
364 365 3.013921 GTTCTTCACGAATGGGGCATTA 58.986 45.455 0.00 0.00 33.90 1.90
365 366 1.818674 GTTCTTCACGAATGGGGCATT 59.181 47.619 0.00 0.00 36.72 3.56
366 367 1.463674 GTTCTTCACGAATGGGGCAT 58.536 50.000 0.00 0.00 33.45 4.40
368 369 1.644786 CGGTTCTTCACGAATGGGGC 61.645 60.000 0.00 0.00 33.45 5.80
369 370 1.024579 CCGGTTCTTCACGAATGGGG 61.025 60.000 0.00 0.00 33.45 4.96
370 371 1.024579 CCCGGTTCTTCACGAATGGG 61.025 60.000 0.00 0.00 41.12 4.00
371 372 0.036765 TCCCGGTTCTTCACGAATGG 60.037 55.000 0.00 0.00 33.45 3.16
374 375 1.619654 TAGTCCCGGTTCTTCACGAA 58.380 50.000 0.00 0.00 0.00 3.85
375 376 1.619654 TTAGTCCCGGTTCTTCACGA 58.380 50.000 0.00 0.00 0.00 4.35
376 377 2.268298 CATTAGTCCCGGTTCTTCACG 58.732 52.381 0.00 0.00 0.00 4.35
377 378 2.629051 CCATTAGTCCCGGTTCTTCAC 58.371 52.381 0.00 0.00 0.00 3.18
378 379 1.557832 CCCATTAGTCCCGGTTCTTCA 59.442 52.381 0.00 0.00 0.00 3.02
380 381 0.255033 GCCCATTAGTCCCGGTTCTT 59.745 55.000 0.00 0.00 0.00 2.52
381 382 0.620700 AGCCCATTAGTCCCGGTTCT 60.621 55.000 0.00 0.15 0.00 3.01
382 383 0.463833 CAGCCCATTAGTCCCGGTTC 60.464 60.000 0.00 0.00 0.00 3.62
383 384 1.607612 CAGCCCATTAGTCCCGGTT 59.392 57.895 0.00 0.00 0.00 4.44
384 385 2.375345 CCAGCCCATTAGTCCCGGT 61.375 63.158 0.00 0.00 0.00 5.28
386 387 2.203209 GCCAGCCCATTAGTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
387 388 2.195956 GGCCAGCCCATTAGTCCC 59.804 66.667 0.00 0.00 0.00 4.46
388 389 0.753111 CTTGGCCAGCCCATTAGTCC 60.753 60.000 5.11 0.00 44.89 3.85
389 390 1.387295 GCTTGGCCAGCCCATTAGTC 61.387 60.000 5.11 0.00 44.89 2.59
390 391 1.380380 GCTTGGCCAGCCCATTAGT 60.380 57.895 5.11 0.00 44.89 2.24
391 392 3.530067 GCTTGGCCAGCCCATTAG 58.470 61.111 5.11 0.00 44.89 1.73
403 404 2.650778 GCTTTGGTTCGGGCTTGG 59.349 61.111 0.00 0.00 0.00 3.61
404 405 2.650778 GGCTTTGGTTCGGGCTTG 59.349 61.111 0.00 0.00 0.00 4.01
405 406 2.600470 GGGCTTTGGTTCGGGCTT 60.600 61.111 0.00 0.00 0.00 4.35
406 407 3.580319 AGGGCTTTGGTTCGGGCT 61.580 61.111 0.00 0.00 0.00 5.19
408 409 1.112916 AAACAGGGCTTTGGTTCGGG 61.113 55.000 0.00 0.00 0.00 5.14
409 410 0.750249 AAAACAGGGCTTTGGTTCGG 59.250 50.000 0.00 0.00 0.00 4.30
410 411 1.681264 AGAAAACAGGGCTTTGGTTCG 59.319 47.619 0.00 0.00 0.00 3.95
411 412 3.889538 AGTAGAAAACAGGGCTTTGGTTC 59.110 43.478 0.00 0.00 0.00 3.62
412 413 3.910989 AGTAGAAAACAGGGCTTTGGTT 58.089 40.909 0.00 0.00 0.00 3.67
413 414 3.595190 AGTAGAAAACAGGGCTTTGGT 57.405 42.857 0.00 0.00 0.00 3.67
414 415 5.105756 CCATTAGTAGAAAACAGGGCTTTGG 60.106 44.000 0.00 0.00 0.00 3.28
416 417 5.476945 CACCATTAGTAGAAAACAGGGCTTT 59.523 40.000 0.00 0.00 0.00 3.51
417 418 5.010282 CACCATTAGTAGAAAACAGGGCTT 58.990 41.667 0.00 0.00 0.00 4.35
419 420 4.585879 TCACCATTAGTAGAAAACAGGGC 58.414 43.478 0.00 0.00 0.00 5.19
420 421 6.884295 TCAATCACCATTAGTAGAAAACAGGG 59.116 38.462 0.00 0.00 0.00 4.45
421 422 7.921786 TCAATCACCATTAGTAGAAAACAGG 57.078 36.000 0.00 0.00 0.00 4.00
422 423 9.219603 TCTTCAATCACCATTAGTAGAAAACAG 57.780 33.333 0.00 0.00 0.00 3.16
423 424 9.219603 CTCTTCAATCACCATTAGTAGAAAACA 57.780 33.333 0.00 0.00 0.00 2.83
424 425 8.178313 GCTCTTCAATCACCATTAGTAGAAAAC 58.822 37.037 0.00 0.00 0.00 2.43
426 427 7.624549 AGCTCTTCAATCACCATTAGTAGAAA 58.375 34.615 0.00 0.00 0.00 2.52
427 428 7.187824 AGCTCTTCAATCACCATTAGTAGAA 57.812 36.000 0.00 0.00 0.00 2.10
428 429 6.798427 AGCTCTTCAATCACCATTAGTAGA 57.202 37.500 0.00 0.00 0.00 2.59
429 430 7.335422 ACAAAGCTCTTCAATCACCATTAGTAG 59.665 37.037 0.00 0.00 0.00 2.57
430 431 7.119699 CACAAAGCTCTTCAATCACCATTAGTA 59.880 37.037 0.00 0.00 0.00 1.82
431 432 6.006449 ACAAAGCTCTTCAATCACCATTAGT 58.994 36.000 0.00 0.00 0.00 2.24
434 435 4.586001 ACACAAAGCTCTTCAATCACCATT 59.414 37.500 0.00 0.00 0.00 3.16
435 436 4.022589 CACACAAAGCTCTTCAATCACCAT 60.023 41.667 0.00 0.00 0.00 3.55
436 437 3.316029 CACACAAAGCTCTTCAATCACCA 59.684 43.478 0.00 0.00 0.00 4.17
438 439 4.818534 TCACACAAAGCTCTTCAATCAC 57.181 40.909 0.00 0.00 0.00 3.06
439 440 6.712095 ACTAATCACACAAAGCTCTTCAATCA 59.288 34.615 0.00 0.00 0.00 2.57
440 441 7.138692 ACTAATCACACAAAGCTCTTCAATC 57.861 36.000 0.00 0.00 0.00 2.67
443 444 6.650807 CCTAACTAATCACACAAAGCTCTTCA 59.349 38.462 0.00 0.00 0.00 3.02
445 446 6.534634 ACCTAACTAATCACACAAAGCTCTT 58.465 36.000 0.00 0.00 0.00 2.85
446 447 6.115448 ACCTAACTAATCACACAAAGCTCT 57.885 37.500 0.00 0.00 0.00 4.09
447 448 6.204882 ACAACCTAACTAATCACACAAAGCTC 59.795 38.462 0.00 0.00 0.00 4.09
449 450 6.142817 CACAACCTAACTAATCACACAAAGC 58.857 40.000 0.00 0.00 0.00 3.51
451 452 7.988599 AGTACACAACCTAACTAATCACACAAA 59.011 33.333 0.00 0.00 0.00 2.83
452 453 7.439955 CAGTACACAACCTAACTAATCACACAA 59.560 37.037 0.00 0.00 0.00 3.33
453 454 6.926826 CAGTACACAACCTAACTAATCACACA 59.073 38.462 0.00 0.00 0.00 3.72
454 455 6.927381 ACAGTACACAACCTAACTAATCACAC 59.073 38.462 0.00 0.00 0.00 3.82
476 2611 4.579869 AGCACTTGATGGTAACCTAACAG 58.420 43.478 0.00 0.00 37.23 3.16
547 2683 4.895224 AGAATGTATACTGCGTCTCGAA 57.105 40.909 4.17 0.00 0.00 3.71
549 2685 4.798907 ACAAAGAATGTATACTGCGTCTCG 59.201 41.667 4.17 0.72 41.63 4.04
550 2686 6.090898 ACAACAAAGAATGTATACTGCGTCTC 59.909 38.462 4.17 0.00 42.99 3.36
551 2687 5.932303 ACAACAAAGAATGTATACTGCGTCT 59.068 36.000 4.17 0.00 42.99 4.18
552 2688 6.165659 ACAACAAAGAATGTATACTGCGTC 57.834 37.500 4.17 0.00 42.99 5.19
553 2689 6.872020 ACTACAACAAAGAATGTATACTGCGT 59.128 34.615 4.17 0.00 42.99 5.24
554 2690 7.290857 ACTACAACAAAGAATGTATACTGCG 57.709 36.000 4.17 0.00 42.99 5.18
555 2691 8.717821 TCAACTACAACAAAGAATGTATACTGC 58.282 33.333 4.17 0.00 42.99 4.40
563 2699 8.961092 CAGAACAATCAACTACAACAAAGAATG 58.039 33.333 0.00 0.00 0.00 2.67
626 2766 3.683365 TGCTGAGAAATGCAGTACTCA 57.317 42.857 15.24 15.24 37.71 3.41
656 3030 9.971922 GTAGTTATTACCGTGGTAAATCATAGT 57.028 33.333 14.99 0.51 42.82 2.12
660 3034 8.137437 GCTAGTAGTTATTACCGTGGTAAATCA 58.863 37.037 14.99 2.00 42.82 2.57
697 3082 1.368268 ACTTCCTTCCCTGGGGCAAA 61.368 55.000 14.00 0.00 34.68 3.68
698 3083 0.476808 TACTTCCTTCCCTGGGGCAA 60.477 55.000 14.00 0.00 34.68 4.52
699 3084 0.914417 CTACTTCCTTCCCTGGGGCA 60.914 60.000 14.00 0.00 34.68 5.36
701 3086 1.205055 GACTACTTCCTTCCCTGGGG 58.795 60.000 14.00 2.42 0.00 4.96
702 3087 2.255770 AGACTACTTCCTTCCCTGGG 57.744 55.000 6.33 6.33 0.00 4.45
703 3088 4.642466 AAAAGACTACTTCCTTCCCTGG 57.358 45.455 0.00 0.00 35.05 4.45
729 3114 1.277557 CTTCCCTGTGGGTCTCAGAAG 59.722 57.143 2.25 0.00 44.74 2.85
730 3115 1.352083 CTTCCCTGTGGGTCTCAGAA 58.648 55.000 2.25 0.00 44.74 3.02
732 3117 0.610687 GACTTCCCTGTGGGTCTCAG 59.389 60.000 2.25 0.00 44.74 3.35
734 3119 1.186267 ACGACTTCCCTGTGGGTCTC 61.186 60.000 2.25 0.00 44.74 3.36
735 3120 1.152312 ACGACTTCCCTGTGGGTCT 60.152 57.895 2.25 0.00 44.74 3.85
741 3127 0.898320 CCAGATGACGACTTCCCTGT 59.102 55.000 0.00 0.00 0.00 4.00
815 3206 1.074872 CGTTACCGGAAGAGCGGTTC 61.075 60.000 9.46 0.00 39.45 3.62
855 3247 2.506061 CCATCTCCGAGCCAGAGGG 61.506 68.421 0.00 0.00 35.59 4.30
858 3250 3.157252 GCCCATCTCCGAGCCAGA 61.157 66.667 0.00 0.00 0.00 3.86
859 3251 4.598894 CGCCCATCTCCGAGCCAG 62.599 72.222 0.00 0.00 0.00 4.85
930 3337 2.511600 CGTTCACGGGGATGAGCC 60.512 66.667 0.00 0.00 35.37 4.70
932 3339 1.519455 GCTCGTTCACGGGGATGAG 60.519 63.158 11.15 11.15 40.87 2.90
935 3342 2.579201 CTGCTCGTTCACGGGGAT 59.421 61.111 0.57 0.00 40.03 3.85
1137 3581 1.289380 GCTAGGTCGGCCTAATCCG 59.711 63.158 18.14 6.46 45.99 4.18
1163 3607 3.270092 GCCTAGGTTAAGCGCGGC 61.270 66.667 19.43 19.43 0.00 6.53
1169 3613 2.159028 GGTGCTCTGAGCCTAGGTTAAG 60.159 54.545 25.61 7.21 41.51 1.85
1180 3624 4.463879 CTGCGGGGGTGCTCTGAG 62.464 72.222 0.00 0.00 35.36 3.35
1233 3677 3.492829 GGAAAATACTACCGGAGCCAGAG 60.493 52.174 9.46 0.00 0.00 3.35
1237 3681 2.093341 TGTGGAAAATACTACCGGAGCC 60.093 50.000 9.46 0.00 0.00 4.70
1238 3682 3.195661 CTGTGGAAAATACTACCGGAGC 58.804 50.000 9.46 0.00 0.00 4.70
1239 3683 4.467198 ACTGTGGAAAATACTACCGGAG 57.533 45.455 9.46 3.52 0.00 4.63
1240 3684 5.018809 ACTACTGTGGAAAATACTACCGGA 58.981 41.667 9.46 0.00 0.00 5.14
1241 3685 5.334724 ACTACTGTGGAAAATACTACCGG 57.665 43.478 0.00 0.00 0.00 5.28
1242 3686 8.937634 ATTAACTACTGTGGAAAATACTACCG 57.062 34.615 0.00 0.00 0.00 4.02
1243 3687 9.880157 TGATTAACTACTGTGGAAAATACTACC 57.120 33.333 0.00 0.00 0.00 3.18
1255 3699 5.180117 AGCAACAGCTTGATTAACTACTGTG 59.820 40.000 0.00 0.00 38.32 3.66
1262 3706 3.181516 CGGAGAGCAACAGCTTGATTAAC 60.182 47.826 0.00 0.00 39.10 2.01
1267 3711 0.601046 CACGGAGAGCAACAGCTTGA 60.601 55.000 0.00 0.00 39.10 3.02
1268 3712 1.572085 CCACGGAGAGCAACAGCTTG 61.572 60.000 0.00 0.00 39.10 4.01
1269 3713 1.302033 CCACGGAGAGCAACAGCTT 60.302 57.895 0.00 0.00 39.10 3.74
1270 3714 2.345244 CCACGGAGAGCAACAGCT 59.655 61.111 0.00 0.00 42.41 4.24
1280 3724 1.577328 GCACCATTGTCACCACGGAG 61.577 60.000 0.00 0.00 0.00 4.63
1286 3730 1.181098 AAGCAGGCACCATTGTCACC 61.181 55.000 0.00 0.00 0.00 4.02
1287 3731 0.038892 CAAGCAGGCACCATTGTCAC 60.039 55.000 0.00 0.00 0.00 3.67
1288 3732 1.180456 CCAAGCAGGCACCATTGTCA 61.180 55.000 0.00 0.00 0.00 3.58
1289 3733 1.588082 CCAAGCAGGCACCATTGTC 59.412 57.895 0.00 0.00 0.00 3.18
1309 3753 0.238289 AATTCACAAAGTCCTGCGCG 59.762 50.000 0.00 0.00 0.00 6.86
1570 4029 0.970640 TGTATGTGCGGTACAGGTGT 59.029 50.000 4.97 0.00 43.80 4.16
1572 4031 1.203994 GAGTGTATGTGCGGTACAGGT 59.796 52.381 4.97 0.00 43.80 4.00
1575 4038 4.994907 ATAAGAGTGTATGTGCGGTACA 57.005 40.909 0.33 0.33 44.87 2.90
1577 4040 4.336153 TCGAATAAGAGTGTATGTGCGGTA 59.664 41.667 0.00 0.00 0.00 4.02
1591 4054 2.490509 TGGACAGAAGCGTCGAATAAGA 59.509 45.455 0.00 0.00 36.73 2.10
1596 4059 0.108804 GGATGGACAGAAGCGTCGAA 60.109 55.000 0.00 0.00 36.73 3.71
1608 4071 2.032550 CGCAAGATGAACATGGATGGAC 59.967 50.000 0.00 0.00 43.02 4.02
1630 4093 3.817238 AGCAACGTAAACCGCTTTATTG 58.183 40.909 0.00 0.00 41.42 1.90
1633 4096 2.221517 GTGAGCAACGTAAACCGCTTTA 59.778 45.455 0.00 0.00 41.42 1.85
1634 4097 1.003223 GTGAGCAACGTAAACCGCTTT 60.003 47.619 0.00 0.00 41.42 3.51
1672 4135 2.903547 TTTCGCGGCCAGAGCAAAC 61.904 57.895 6.13 0.00 42.56 2.93
1703 4166 1.739750 CCCCCTTCCTCTATCTGCAT 58.260 55.000 0.00 0.00 0.00 3.96
1727 4190 2.697761 CGACCTGATCCACGACCGT 61.698 63.158 0.00 0.00 0.00 4.83
1852 4315 3.262420 CAAGTATTCGGTAGCTGCAAGT 58.738 45.455 3.61 0.00 35.30 3.16
1853 4316 2.030946 GCAAGTATTCGGTAGCTGCAAG 59.969 50.000 3.61 0.00 0.00 4.01
1854 4317 2.006888 GCAAGTATTCGGTAGCTGCAA 58.993 47.619 3.61 0.00 0.00 4.08
1855 4318 1.066502 TGCAAGTATTCGGTAGCTGCA 60.067 47.619 3.61 0.00 0.00 4.41
1856 4319 1.594862 CTGCAAGTATTCGGTAGCTGC 59.405 52.381 0.00 0.00 0.00 5.25
1857 4320 1.594862 GCTGCAAGTATTCGGTAGCTG 59.405 52.381 0.00 0.00 35.30 4.24
1858 4321 1.482593 AGCTGCAAGTATTCGGTAGCT 59.517 47.619 1.02 0.00 35.30 3.32
1859 4322 1.941325 AGCTGCAAGTATTCGGTAGC 58.059 50.000 1.02 0.00 35.30 3.58
1860 4323 3.068307 AGGTAGCTGCAAGTATTCGGTAG 59.932 47.826 3.61 0.00 35.30 3.18
1861 4324 3.028850 AGGTAGCTGCAAGTATTCGGTA 58.971 45.455 3.61 0.00 35.30 4.02
1862 4325 1.831736 AGGTAGCTGCAAGTATTCGGT 59.168 47.619 3.61 0.00 35.30 4.69
1863 4326 2.604046 AGGTAGCTGCAAGTATTCGG 57.396 50.000 3.61 0.00 35.30 4.30
1864 4327 3.521560 TGAAGGTAGCTGCAAGTATTCG 58.478 45.455 0.00 0.00 35.30 3.34
1865 4328 5.277058 CGAATGAAGGTAGCTGCAAGTATTC 60.277 44.000 6.71 5.38 35.30 1.75
1866 4329 4.572389 CGAATGAAGGTAGCTGCAAGTATT 59.428 41.667 6.71 0.00 35.30 1.89
1867 4330 4.122776 CGAATGAAGGTAGCTGCAAGTAT 58.877 43.478 6.71 0.00 35.30 2.12
1868 4331 3.521560 CGAATGAAGGTAGCTGCAAGTA 58.478 45.455 6.71 0.00 35.30 2.24
1896 4359 9.903682 GATCCATCCAACAATGATAAATAACAG 57.096 33.333 0.00 0.00 0.00 3.16
1938 4402 2.143925 GTCAAACTGGAAGGAGAACCG 58.856 52.381 0.00 0.00 39.30 4.44
1939 4403 2.106684 AGGTCAAACTGGAAGGAGAACC 59.893 50.000 0.00 0.00 39.30 3.62
1979 4443 3.498661 CCACCCCAACTTTAAAGAGCTCT 60.499 47.826 21.92 11.45 0.00 4.09
2001 4465 3.308595 TCATTCACGCCATCATCGTAAAC 59.691 43.478 0.00 0.00 38.19 2.01
2030 4494 2.353607 GCGATGGCGTAGAGGTCG 60.354 66.667 0.00 0.00 40.36 4.79
2045 4509 0.804989 GATTTCTTGGGTCCACAGCG 59.195 55.000 0.00 0.00 0.00 5.18
2066 4530 1.350193 CACAGACTGCCACACGATAC 58.650 55.000 1.25 0.00 0.00 2.24
2083 4547 2.932614 CTCACAAACTCATCGGATCCAC 59.067 50.000 13.41 0.00 0.00 4.02
2183 4647 5.092781 CCGGTTATTCCATCTTCGTTTTTG 58.907 41.667 0.00 0.00 35.57 2.44
2315 4779 1.586154 CGTCACCAAACAGGGGCATC 61.586 60.000 0.00 0.00 42.23 3.91
2474 4938 5.766150 TTCTCCAAATAAATACATGGCCG 57.234 39.130 0.00 0.00 32.87 6.13
2534 4998 1.864711 ACACAGTTGACGATCCGTTTG 59.135 47.619 0.00 0.00 41.37 2.93
2701 5165 5.467735 CGGAAGAATGTAATGATCATCAGCA 59.532 40.000 9.06 8.75 0.00 4.41
2704 5168 5.237127 GCACGGAAGAATGTAATGATCATCA 59.763 40.000 9.06 3.98 0.00 3.07
2705 5169 5.237127 TGCACGGAAGAATGTAATGATCATC 59.763 40.000 9.06 0.00 0.00 2.92
2706 5170 5.125356 TGCACGGAAGAATGTAATGATCAT 58.875 37.500 1.18 1.18 0.00 2.45
2741 5205 9.155975 CTCAACACATTAGGCCATATATCTAAC 57.844 37.037 5.01 0.00 0.00 2.34
2742 5206 7.824289 GCTCAACACATTAGGCCATATATCTAA 59.176 37.037 5.01 0.00 0.00 2.10
2743 5207 7.038373 TGCTCAACACATTAGGCCATATATCTA 60.038 37.037 5.01 0.00 0.00 1.98
2744 5208 6.176183 GCTCAACACATTAGGCCATATATCT 58.824 40.000 5.01 0.00 0.00 1.98
2745 5209 5.939883 TGCTCAACACATTAGGCCATATATC 59.060 40.000 5.01 0.00 0.00 1.63
2760 5224 0.524862 CAATCAGGCCTGCTCAACAC 59.475 55.000 28.91 0.00 0.00 3.32
2764 5228 2.437180 CGCAATCAGGCCTGCTCA 60.437 61.111 28.91 11.93 36.38 4.26
2768 5232 0.740149 TAAATGCGCAATCAGGCCTG 59.260 50.000 27.87 27.87 0.00 4.85
2779 5243 4.926732 GCAAGTGCTATGCATAAATGCGC 61.927 47.826 17.64 17.64 46.62 6.09
2871 5335 5.109210 TGGACATATTTGAGTTGCGTCTAG 58.891 41.667 0.00 0.00 0.00 2.43
2919 5383 8.357402 ACGCCGCATAGTATATATCATTATTGA 58.643 33.333 0.00 0.00 36.00 2.57
2920 5384 8.520835 ACGCCGCATAGTATATATCATTATTG 57.479 34.615 0.00 0.00 0.00 1.90
2921 5385 9.193133 GAACGCCGCATAGTATATATCATTATT 57.807 33.333 0.00 0.00 0.00 1.40
2923 5387 7.143340 GGAACGCCGCATAGTATATATCATTA 58.857 38.462 0.00 0.00 0.00 1.90
2924 5388 5.983720 GGAACGCCGCATAGTATATATCATT 59.016 40.000 0.00 0.00 0.00 2.57
2925 5389 5.068591 TGGAACGCCGCATAGTATATATCAT 59.931 40.000 0.00 0.00 36.79 2.45
2926 5390 4.399934 TGGAACGCCGCATAGTATATATCA 59.600 41.667 0.00 0.00 36.79 2.15
2927 5391 4.928601 TGGAACGCCGCATAGTATATATC 58.071 43.478 0.00 0.00 36.79 1.63
2938 5412 2.596046 ACCAAATGGAACGCCGCA 60.596 55.556 6.42 0.00 38.94 5.69
2967 5441 1.477700 AGCAAAGCAGAACACAAAGCA 59.522 42.857 0.00 0.00 0.00 3.91
2985 5459 2.427095 ACAACAAACCTCTGGTGAAAGC 59.573 45.455 0.00 0.00 35.97 3.51
3020 5499 9.448438 AAAAGCAAGATATGACTTGTGTATGTA 57.552 29.630 0.00 0.00 45.98 2.29
3025 5504 7.042797 ACAAAAAGCAAGATATGACTTGTGT 57.957 32.000 0.00 0.00 45.98 3.72
3077 5571 3.802139 TCTGTCACCGATGATAAATTCGC 59.198 43.478 0.00 0.00 37.14 4.70
3083 5577 4.122046 CAGCATTCTGTCACCGATGATAA 58.878 43.478 0.00 0.00 37.14 1.75
3132 5626 0.173481 TCTTCGTCGCCCTTCATCAG 59.827 55.000 0.00 0.00 0.00 2.90
3153 5647 0.169672 ATGCTGCTGAACATGAACGC 59.830 50.000 0.00 0.00 0.00 4.84
3201 5695 5.200454 CGCAAAGATAAAATCGTCCATCAG 58.800 41.667 0.00 0.00 0.00 2.90
3283 5777 1.673337 TCGTCGTCCGTGTCCTCAT 60.673 57.895 0.00 0.00 37.94 2.90
3314 5808 1.226435 CTCTTCGTCGCCTTCCTCG 60.226 63.158 0.00 0.00 0.00 4.63
3326 5820 1.327303 CCTCCTCATCCTCCTCTTCG 58.673 60.000 0.00 0.00 0.00 3.79
3375 5869 2.416432 CCCCCTCGTCGTCTTCTCC 61.416 68.421 0.00 0.00 0.00 3.71
3376 5870 3.198582 CCCCCTCGTCGTCTTCTC 58.801 66.667 0.00 0.00 0.00 2.87
3414 5908 1.103015 GATCAATCGTCGTCGTCGTC 58.897 55.000 11.41 0.00 38.33 4.20
3415 5909 0.585764 CGATCAATCGTCGTCGTCGT 60.586 55.000 11.41 0.00 44.74 4.34
3416 5910 2.105858 CGATCAATCGTCGTCGTCG 58.894 57.895 5.50 5.50 44.74 5.12
3439 5933 0.108774 GTAAGGGGTGCTATGAGGCC 59.891 60.000 0.00 0.00 0.00 5.19
3462 5956 1.479757 GCCCACCCTTGTTTGAGGTAA 60.480 52.381 0.00 0.00 34.88 2.85
3463 5957 0.111639 GCCCACCCTTGTTTGAGGTA 59.888 55.000 0.00 0.00 34.88 3.08
3466 5960 1.515521 GACGCCCACCCTTGTTTGAG 61.516 60.000 0.00 0.00 0.00 3.02
3467 5961 1.527380 GACGCCCACCCTTGTTTGA 60.527 57.895 0.00 0.00 0.00 2.69
3468 5962 2.561037 GGACGCCCACCCTTGTTTG 61.561 63.158 0.00 0.00 0.00 2.93
3469 5963 2.203437 GGACGCCCACCCTTGTTT 60.203 61.111 0.00 0.00 0.00 2.83
3470 5964 2.292785 AAAGGACGCCCACCCTTGTT 62.293 55.000 0.00 0.00 41.61 2.83
3471 5965 2.292785 AAAAGGACGCCCACCCTTGT 62.293 55.000 0.00 0.00 41.61 3.16
3472 5966 1.530655 AAAAGGACGCCCACCCTTG 60.531 57.895 0.00 0.00 41.61 3.61
3473 5967 1.530655 CAAAAGGACGCCCACCCTT 60.531 57.895 0.00 0.00 44.13 3.95
3474 5968 2.115266 CAAAAGGACGCCCACCCT 59.885 61.111 0.00 0.00 33.88 4.34
3475 5969 2.114411 TCAAAAGGACGCCCACCC 59.886 61.111 0.00 0.00 33.88 4.61
3476 5970 3.351450 GTCAAAAGGACGCCCACC 58.649 61.111 0.00 0.00 36.65 4.61
3500 5994 5.296780 TGCCTATGTACAAGAAAGCTAATGC 59.703 40.000 0.00 0.00 40.05 3.56
3501 5995 6.540189 AGTGCCTATGTACAAGAAAGCTAATG 59.460 38.462 0.00 0.00 0.00 1.90
3502 5996 6.653989 AGTGCCTATGTACAAGAAAGCTAAT 58.346 36.000 0.00 0.00 0.00 1.73
3503 5997 6.049955 AGTGCCTATGTACAAGAAAGCTAA 57.950 37.500 0.00 0.00 0.00 3.09
3504 5998 5.422331 AGAGTGCCTATGTACAAGAAAGCTA 59.578 40.000 0.00 0.00 0.00 3.32
3505 5999 4.223923 AGAGTGCCTATGTACAAGAAAGCT 59.776 41.667 0.00 0.00 0.00 3.74
3506 6000 4.508662 AGAGTGCCTATGTACAAGAAAGC 58.491 43.478 0.00 0.00 0.00 3.51
3507 6001 5.112686 GGAGAGTGCCTATGTACAAGAAAG 58.887 45.833 0.00 0.00 0.00 2.62
3508 6002 4.530553 TGGAGAGTGCCTATGTACAAGAAA 59.469 41.667 0.00 0.00 0.00 2.52
3531 6026 2.834549 CACCACTCAACTATCCTGGACT 59.165 50.000 0.00 0.00 0.00 3.85
3553 6048 5.472137 ACATTTACACCAACACCACTATCAC 59.528 40.000 0.00 0.00 0.00 3.06
3555 6050 6.569179 AACATTTACACCAACACCACTATC 57.431 37.500 0.00 0.00 0.00 2.08
3556 6051 6.737346 GCAAACATTTACACCAACACCACTAT 60.737 38.462 0.00 0.00 0.00 2.12
3557 6052 5.450688 GCAAACATTTACACCAACACCACTA 60.451 40.000 0.00 0.00 0.00 2.74
3558 6053 4.679372 GCAAACATTTACACCAACACCACT 60.679 41.667 0.00 0.00 0.00 4.00
3559 6054 3.553917 GCAAACATTTACACCAACACCAC 59.446 43.478 0.00 0.00 0.00 4.16
3560 6055 3.449018 AGCAAACATTTACACCAACACCA 59.551 39.130 0.00 0.00 0.00 4.17
3561 6056 3.801594 CAGCAAACATTTACACCAACACC 59.198 43.478 0.00 0.00 0.00 4.16
3679 6177 2.498887 CGGGCGCGTTTCGAAAAG 60.499 61.111 17.96 17.96 41.67 2.27
3709 6209 4.087956 TCAAACGAAATTCATGCGAATCG 58.912 39.130 0.00 0.00 41.12 3.34
3818 6319 2.183046 GCCTCAGAGCCGAGTCAC 59.817 66.667 0.00 0.00 0.00 3.67
3821 6322 2.036414 TCAGCCTCAGAGCCGAGT 59.964 61.111 0.00 0.00 0.00 4.18
3905 6414 4.964555 GTGAAAGAGAAGCGAAAGACAAAC 59.035 41.667 0.00 0.00 0.00 2.93
3957 6466 2.084546 CGGCGAGAAGATTCCCTTTTT 58.915 47.619 0.00 0.00 34.68 1.94
3981 6495 4.570663 GACGGACTCCATCGGCGG 62.571 72.222 7.21 0.00 0.00 6.13
4113 6627 2.790039 GGGTAGGGGTAGGGTGGT 59.210 66.667 0.00 0.00 0.00 4.16
4116 6630 1.231231 AGAGGGGTAGGGGTAGGGT 60.231 63.158 0.00 0.00 0.00 4.34
4117 6631 1.547760 GAGAGGGGTAGGGGTAGGG 59.452 68.421 0.00 0.00 0.00 3.53
4118 6632 1.547760 GGAGAGGGGTAGGGGTAGG 59.452 68.421 0.00 0.00 0.00 3.18
4120 6634 2.397902 CGGGAGAGGGGTAGGGGTA 61.398 68.421 0.00 0.00 0.00 3.69
4121 6635 3.763757 CGGGAGAGGGGTAGGGGT 61.764 72.222 0.00 0.00 0.00 4.95
4145 6659 3.726517 CACCGGCAGCAGAAACCG 61.727 66.667 0.00 0.00 46.50 4.44
4146 6660 4.043200 GCACCGGCAGCAGAAACC 62.043 66.667 14.06 0.00 40.72 3.27
4165 6687 0.893727 AAGGCAAACGGGGACACATC 60.894 55.000 0.00 0.00 0.00 3.06
4224 6749 4.452733 CGAAGACCGCCTGGACCC 62.453 72.222 0.00 0.00 39.21 4.46
4225 6750 3.644399 GACGAAGACCGCCTGGACC 62.644 68.421 0.00 0.00 43.32 4.46
4226 6751 2.126031 GACGAAGACCGCCTGGAC 60.126 66.667 0.00 0.00 43.32 4.02
4227 6752 1.874345 GAAGACGAAGACCGCCTGGA 61.874 60.000 0.00 0.00 43.32 3.86
4228 6753 1.446272 GAAGACGAAGACCGCCTGG 60.446 63.158 0.00 0.00 43.32 4.45
4229 6754 1.801913 CGAAGACGAAGACCGCCTG 60.802 63.158 0.00 0.00 43.32 4.85
4230 6755 2.567049 CGAAGACGAAGACCGCCT 59.433 61.111 0.00 0.00 43.32 5.52
4231 6756 2.506438 CCGAAGACGAAGACCGCC 60.506 66.667 0.00 0.00 43.32 6.13
4234 6759 1.511768 CTCCCCGAAGACGAAGACC 59.488 63.158 0.00 0.00 42.66 3.85
4235 6760 1.153804 GCTCCCCGAAGACGAAGAC 60.154 63.158 0.00 0.00 42.66 3.01
4236 6761 2.697761 CGCTCCCCGAAGACGAAGA 61.698 63.158 0.00 0.00 42.66 2.87
4237 6762 2.202623 CGCTCCCCGAAGACGAAG 60.203 66.667 0.00 0.00 42.66 3.79
4238 6763 4.430765 GCGCTCCCCGAAGACGAA 62.431 66.667 0.00 0.00 42.66 3.85
4295 6823 2.762043 AAGGGCGAGAGGGAGAGC 60.762 66.667 0.00 0.00 0.00 4.09
4302 6830 1.519719 CCTTGGAGAAGGGCGAGAG 59.480 63.158 0.00 0.00 44.76 3.20
4333 6861 4.497984 ACACCACAAGCACCGCCA 62.498 61.111 0.00 0.00 0.00 5.69
4341 6878 2.167281 AGGATGAGATCGACACCACAAG 59.833 50.000 0.00 0.00 0.00 3.16
4342 6879 2.166459 GAGGATGAGATCGACACCACAA 59.834 50.000 0.00 0.00 0.00 3.33
4343 6880 1.751351 GAGGATGAGATCGACACCACA 59.249 52.381 0.00 0.00 0.00 4.17
4345 6882 2.027385 CAGAGGATGAGATCGACACCA 58.973 52.381 0.00 0.00 0.00 4.17
4346 6883 2.034053 GTCAGAGGATGAGATCGACACC 59.966 54.545 0.00 0.00 39.07 4.16
4347 6884 2.034053 GGTCAGAGGATGAGATCGACAC 59.966 54.545 0.00 0.00 39.07 3.67
4348 6885 2.302260 GGTCAGAGGATGAGATCGACA 58.698 52.381 0.00 0.00 39.07 4.35
4349 6886 2.034053 GTGGTCAGAGGATGAGATCGAC 59.966 54.545 0.00 0.00 39.07 4.20
4350 6887 2.302260 GTGGTCAGAGGATGAGATCGA 58.698 52.381 0.00 0.00 39.07 3.59
4358 6898 1.736586 GATCGCGTGGTCAGAGGAT 59.263 57.895 5.77 0.00 0.00 3.24
4359 6899 2.415608 GGATCGCGTGGTCAGAGGA 61.416 63.158 12.01 0.00 0.00 3.71
4378 6918 3.976701 AATCAGGGGAAGGCGCGTG 62.977 63.158 8.43 0.00 42.19 5.34
4401 6941 2.740447 GCTAAATCGGACGACCAAACTT 59.260 45.455 4.48 0.00 35.59 2.66
4402 6942 2.344025 GCTAAATCGGACGACCAAACT 58.656 47.619 4.48 0.00 35.59 2.66
4408 6948 1.751552 CGTAGGCTAAATCGGACGAC 58.248 55.000 0.00 0.00 32.20 4.34
4413 6953 2.503256 GACGCGTAGGCTAAATCGG 58.497 57.895 13.97 4.13 36.88 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.