Multiple sequence alignment - TraesCS7B01G465000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G465000 chr7B 100.000 3971 0 0 1 3971 721210728 721206758 0.000000e+00 7334.0
1 TraesCS7B01G465000 chr7B 79.861 144 22 5 1273 1411 2888256 2888397 9.080000e-17 99.0
2 TraesCS7B01G465000 chr7A 86.083 2012 156 55 1 1979 719577480 719575560 0.000000e+00 2050.0
3 TraesCS7B01G465000 chr7A 84.078 358 40 10 2799 3155 719571481 719571140 2.960000e-86 329.0
4 TraesCS7B01G465000 chr7A 88.034 117 14 0 1601 1717 579789084 579789200 5.350000e-29 139.0
5 TraesCS7B01G465000 chr7A 78.286 175 18 8 2377 2542 719571817 719571654 1.170000e-15 95.3
6 TraesCS7B01G465000 chr7A 90.625 64 5 1 2175 2238 17458915 17458853 2.540000e-12 84.2
7 TraesCS7B01G465000 chr7A 96.154 52 1 1 2175 2226 32947893 32947943 2.540000e-12 84.2
8 TraesCS7B01G465000 chr7D 83.689 2158 190 67 1 2095 623541873 623539815 0.000000e+00 1886.0
9 TraesCS7B01G465000 chr7D 83.754 357 40 9 2799 3155 623539262 623538924 4.950000e-84 322.0
10 TraesCS7B01G465000 chr1B 94.531 768 35 6 3209 3971 651903076 651902311 0.000000e+00 1179.0
11 TraesCS7B01G465000 chr4B 94.626 763 36 3 3210 3971 573397858 573398616 0.000000e+00 1177.0
12 TraesCS7B01G465000 chr3A 94.495 763 38 3 3211 3971 100863661 100864421 0.000000e+00 1173.0
13 TraesCS7B01G465000 chr3A 93.979 764 42 3 3210 3971 127190847 127190086 0.000000e+00 1153.0
14 TraesCS7B01G465000 chr3A 89.231 65 6 1 2174 2238 479689407 479689344 3.290000e-11 80.5
15 TraesCS7B01G465000 chr2B 94.379 765 37 5 3210 3971 768649455 768648694 0.000000e+00 1170.0
16 TraesCS7B01G465000 chr2B 94.248 765 39 4 3210 3971 669239048 669239810 0.000000e+00 1164.0
17 TraesCS7B01G465000 chr2B 84.127 252 39 1 1467 1717 752902848 752903099 3.960000e-60 243.0
18 TraesCS7B01G465000 chr2B 84.058 207 33 0 1511 1717 252084289 252084495 2.420000e-47 200.0
19 TraesCS7B01G465000 chr2B 83.212 137 18 3 1280 1411 252084113 252084249 1.940000e-23 121.0
20 TraesCS7B01G465000 chr6B 94.110 764 39 5 3210 3971 682643308 682644067 0.000000e+00 1157.0
21 TraesCS7B01G465000 chr6B 94.087 761 41 3 3210 3968 29973968 29973210 0.000000e+00 1153.0
22 TraesCS7B01G465000 chr6B 90.625 64 5 1 2175 2238 124060043 124059981 2.540000e-12 84.2
23 TraesCS7B01G465000 chr2D 94.400 750 38 3 3224 3971 546412171 546411424 0.000000e+00 1149.0
24 TraesCS7B01G465000 chr6D 90.625 64 5 1 2175 2238 413024441 413024379 2.540000e-12 84.2
25 TraesCS7B01G465000 chr5D 96.154 52 1 1 2175 2226 485921214 485921264 2.540000e-12 84.2
26 TraesCS7B01G465000 chr5A 96.154 52 1 1 2175 2226 552381788 552381838 2.540000e-12 84.2
27 TraesCS7B01G465000 chr4D 90.625 64 5 1 2175 2238 506095114 506095052 2.540000e-12 84.2
28 TraesCS7B01G465000 chr4A 90.625 64 5 1 2175 2238 648980004 648979942 2.540000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G465000 chr7B 721206758 721210728 3970 True 7334.000000 7334 100.000000 1 3971 1 chr7B.!!$R1 3970
1 TraesCS7B01G465000 chr7A 719571140 719577480 6340 True 824.766667 2050 82.815667 1 3155 3 chr7A.!!$R2 3154
2 TraesCS7B01G465000 chr7D 623538924 623541873 2949 True 1104.000000 1886 83.721500 1 3155 2 chr7D.!!$R1 3154
3 TraesCS7B01G465000 chr1B 651902311 651903076 765 True 1179.000000 1179 94.531000 3209 3971 1 chr1B.!!$R1 762
4 TraesCS7B01G465000 chr4B 573397858 573398616 758 False 1177.000000 1177 94.626000 3210 3971 1 chr4B.!!$F1 761
5 TraesCS7B01G465000 chr3A 100863661 100864421 760 False 1173.000000 1173 94.495000 3211 3971 1 chr3A.!!$F1 760
6 TraesCS7B01G465000 chr3A 127190086 127190847 761 True 1153.000000 1153 93.979000 3210 3971 1 chr3A.!!$R1 761
7 TraesCS7B01G465000 chr2B 768648694 768649455 761 True 1170.000000 1170 94.379000 3210 3971 1 chr2B.!!$R1 761
8 TraesCS7B01G465000 chr2B 669239048 669239810 762 False 1164.000000 1164 94.248000 3210 3971 1 chr2B.!!$F1 761
9 TraesCS7B01G465000 chr6B 682643308 682644067 759 False 1157.000000 1157 94.110000 3210 3971 1 chr6B.!!$F1 761
10 TraesCS7B01G465000 chr6B 29973210 29973968 758 True 1153.000000 1153 94.087000 3210 3968 1 chr6B.!!$R1 758
11 TraesCS7B01G465000 chr2D 546411424 546412171 747 True 1149.000000 1149 94.400000 3224 3971 1 chr2D.!!$R1 747

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 493 0.108774 GCCTCATAGCACCCCTTACC 59.891 60.0 0.0 0.0 0.0 2.85 F
1414 1484 0.107214 CGCCTTCCCCTGATTTGCTA 60.107 55.0 0.0 0.0 0.0 3.49 F
1441 1511 0.029834 TCGTCCGATTTAGCCTACGC 59.970 55.0 0.0 0.0 0.0 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1426 1496 0.248743 TGACGCGTAGGCTAAATCGG 60.249 55.0 13.97 4.13 36.88 4.18 R
2732 6240 0.108585 GACACTCAGGGAAACAGGCA 59.891 55.0 0.00 0.00 0.00 4.75 R
3399 6933 0.257039 CAGCACTAGGCCCTTCCATT 59.743 55.0 0.00 0.00 46.50 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 39 2.363306 TGTTGTGACAGGGCTGAAAT 57.637 45.000 0.00 0.00 0.00 2.17
38 44 4.835284 TGTGACAGGGCTGAAATACATA 57.165 40.909 0.00 0.00 0.00 2.29
47 53 4.941263 GGGCTGAAATACATACACAAGTCA 59.059 41.667 0.00 0.00 0.00 3.41
56 62 9.618890 AAATACATACACAAGTCATATCTTGCT 57.381 29.630 6.38 0.00 45.86 3.91
145 166 8.306761 ACATGTGGATTTTCTACCTTTTGATTC 58.693 33.333 0.00 0.00 0.00 2.52
155 176 6.418101 TCTACCTTTTGATTCTGATGAAGGG 58.582 40.000 5.10 0.00 38.32 3.95
388 409 1.661821 GACGGAGATTCGGGCGATG 60.662 63.158 0.00 0.00 0.00 3.84
389 410 2.356313 CGGAGATTCGGGCGATGG 60.356 66.667 0.00 0.00 0.00 3.51
390 411 2.856628 CGGAGATTCGGGCGATGGA 61.857 63.158 0.00 0.00 0.00 3.41
428 449 4.812476 CGGCGCCGAAGACATGGA 62.812 66.667 44.86 0.00 42.83 3.41
429 450 3.195698 GGCGCCGAAGACATGGAC 61.196 66.667 12.58 0.00 0.00 4.02
430 451 3.554692 GCGCCGAAGACATGGACG 61.555 66.667 0.00 0.00 0.00 4.79
465 486 1.301009 GTAGCGGCCTCATAGCACC 60.301 63.158 0.00 0.00 0.00 5.01
467 488 4.937431 GCGGCCTCATAGCACCCC 62.937 72.222 0.00 0.00 0.00 4.95
469 490 2.746375 CGGCCTCATAGCACCCCTT 61.746 63.158 0.00 0.00 0.00 3.95
472 493 0.108774 GCCTCATAGCACCCCTTACC 59.891 60.000 0.00 0.00 0.00 2.85
473 494 1.507140 CCTCATAGCACCCCTTACCA 58.493 55.000 0.00 0.00 0.00 3.25
475 496 2.119495 CTCATAGCACCCCTTACCAGT 58.881 52.381 0.00 0.00 0.00 4.00
476 497 2.505819 CTCATAGCACCCCTTACCAGTT 59.494 50.000 0.00 0.00 0.00 3.16
479 500 0.989602 AGCACCCCTTACCAGTTACC 59.010 55.000 0.00 0.00 0.00 2.85
480 501 0.989602 GCACCCCTTACCAGTTACCT 59.010 55.000 0.00 0.00 0.00 3.08
481 502 1.065636 GCACCCCTTACCAGTTACCTC 60.066 57.143 0.00 0.00 0.00 3.85
482 503 2.262637 CACCCCTTACCAGTTACCTCA 58.737 52.381 0.00 0.00 0.00 3.86
483 504 2.640826 CACCCCTTACCAGTTACCTCAA 59.359 50.000 0.00 0.00 0.00 3.02
484 505 3.073356 CACCCCTTACCAGTTACCTCAAA 59.927 47.826 0.00 0.00 0.00 2.69
485 506 3.073503 ACCCCTTACCAGTTACCTCAAAC 59.926 47.826 0.00 0.00 0.00 2.93
486 507 3.073356 CCCCTTACCAGTTACCTCAAACA 59.927 47.826 0.00 0.00 0.00 2.83
487 508 4.446600 CCCCTTACCAGTTACCTCAAACAA 60.447 45.833 0.00 0.00 0.00 2.83
488 509 4.760204 CCCTTACCAGTTACCTCAAACAAG 59.240 45.833 0.00 0.00 0.00 3.16
489 510 4.760204 CCTTACCAGTTACCTCAAACAAGG 59.240 45.833 0.00 0.00 42.55 3.61
490 511 3.223674 ACCAGTTACCTCAAACAAGGG 57.776 47.619 0.00 0.00 41.04 3.95
491 512 2.512476 ACCAGTTACCTCAAACAAGGGT 59.488 45.455 0.00 0.00 41.04 4.34
510 531 2.114411 GGCGTCCTTTTGACCCCA 59.886 61.111 0.00 0.00 40.96 4.96
511 532 2.265904 GGCGTCCTTTTGACCCCAC 61.266 63.158 0.00 0.00 40.96 4.61
512 533 1.527380 GCGTCCTTTTGACCCCACA 60.527 57.895 0.00 0.00 41.18 4.17
513 534 1.515521 GCGTCCTTTTGACCCCACAG 61.516 60.000 0.00 0.00 41.18 3.66
514 535 1.515521 CGTCCTTTTGACCCCACAGC 61.516 60.000 0.00 0.00 41.18 4.40
515 536 0.467290 GTCCTTTTGACCCCACAGCA 60.467 55.000 0.00 0.00 38.09 4.41
516 537 0.482446 TCCTTTTGACCCCACAGCAT 59.518 50.000 0.00 0.00 0.00 3.79
517 538 1.133199 TCCTTTTGACCCCACAGCATT 60.133 47.619 0.00 0.00 0.00 3.56
518 539 2.109128 TCCTTTTGACCCCACAGCATTA 59.891 45.455 0.00 0.00 0.00 1.90
519 540 2.493278 CCTTTTGACCCCACAGCATTAG 59.507 50.000 0.00 0.00 0.00 1.73
520 541 1.544724 TTTGACCCCACAGCATTAGC 58.455 50.000 0.00 0.00 42.56 3.09
544 566 3.708451 TCTTGTACATAGGCACTCTCCA 58.292 45.455 0.00 0.00 41.75 3.86
566 588 2.093447 GTCCAGGATAGTTGAGTGGTGG 60.093 54.545 0.00 0.00 0.00 4.61
568 590 2.355108 CCAGGATAGTTGAGTGGTGGTG 60.355 54.545 0.00 0.00 0.00 4.17
569 591 2.567169 CAGGATAGTTGAGTGGTGGTGA 59.433 50.000 0.00 0.00 0.00 4.02
570 592 3.198635 CAGGATAGTTGAGTGGTGGTGAT 59.801 47.826 0.00 0.00 0.00 3.06
571 593 4.405680 CAGGATAGTTGAGTGGTGGTGATA 59.594 45.833 0.00 0.00 0.00 2.15
572 594 4.651503 AGGATAGTTGAGTGGTGGTGATAG 59.348 45.833 0.00 0.00 0.00 2.08
573 595 4.406003 GGATAGTTGAGTGGTGGTGATAGT 59.594 45.833 0.00 0.00 0.00 2.12
574 596 3.685139 AGTTGAGTGGTGGTGATAGTG 57.315 47.619 0.00 0.00 0.00 2.74
673 698 5.157781 AGAAAGAAAGAAGACGACGATGAG 58.842 41.667 0.00 0.00 0.00 2.90
697 722 3.156879 CGGTTTCGCGCGCTTTTC 61.157 61.111 30.48 16.18 0.00 2.29
754 781 6.155475 TGAATTTCGTTTGAATTTCCCACT 57.845 33.333 9.05 0.00 40.92 4.00
769 796 4.447138 TCCCACTGTTTGGTGATAACTT 57.553 40.909 0.00 0.00 45.25 2.66
770 797 5.570205 TCCCACTGTTTGGTGATAACTTA 57.430 39.130 0.00 0.00 45.25 2.24
771 798 6.134535 TCCCACTGTTTGGTGATAACTTAT 57.865 37.500 0.00 0.00 45.25 1.73
772 799 6.548321 TCCCACTGTTTGGTGATAACTTATT 58.452 36.000 0.00 0.00 45.25 1.40
773 800 7.691213 TCCCACTGTTTGGTGATAACTTATTA 58.309 34.615 0.00 0.00 45.25 0.98
774 801 8.333235 TCCCACTGTTTGGTGATAACTTATTAT 58.667 33.333 0.00 0.00 45.25 1.28
775 802 8.966868 CCCACTGTTTGGTGATAACTTATTATT 58.033 33.333 0.00 0.00 45.25 1.40
831 859 2.164219 GACTTCAGAGAGCTCCTGTGAG 59.836 54.545 23.28 22.31 44.62 3.51
834 862 1.074566 TCAGAGAGCTCCTGTGAGTGA 59.925 52.381 23.28 9.86 39.88 3.41
854 890 2.125753 CGGCTCTGAGGCTGACAC 60.126 66.667 25.94 0.00 40.74 3.67
902 938 4.899239 GCGCTGATCCTCACCCCG 62.899 72.222 0.00 0.00 0.00 5.73
946 982 2.440539 TCGCTTCTCTTTCACCAGTC 57.559 50.000 0.00 0.00 0.00 3.51
994 1035 3.631127 GAATCTTCTCGCCGCCGC 61.631 66.667 0.00 0.00 0.00 6.53
1141 1182 2.728435 CGCACCACCCTACCCCTAC 61.728 68.421 0.00 0.00 0.00 3.18
1146 1187 1.074699 CACCCTACCCCTACCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
1178 1227 2.979676 TTTCTGCTGCCGGTGCTG 60.980 61.111 19.25 18.32 38.71 4.41
1264 1322 2.338015 CGGTCTTCGTCTTCGGGGA 61.338 63.158 0.00 0.00 37.69 4.81
1265 1323 1.511768 GGTCTTCGTCTTCGGGGAG 59.488 63.158 0.00 0.00 37.69 4.30
1266 1324 1.153804 GTCTTCGTCTTCGGGGAGC 60.154 63.158 0.00 0.00 37.69 4.70
1267 1325 2.202623 CTTCGTCTTCGGGGAGCG 60.203 66.667 0.00 0.00 37.69 5.03
1268 1326 4.430765 TTCGTCTTCGGGGAGCGC 62.431 66.667 0.00 0.00 37.69 5.92
1346 1404 4.060038 CAAGGTACGGACGGCGGT 62.060 66.667 13.24 6.72 0.00 5.68
1362 1429 3.964875 GTGGCGGTGCTTGTGGTG 61.965 66.667 0.00 0.00 0.00 4.17
1363 1430 4.497984 TGGCGGTGCTTGTGGTGT 62.498 61.111 0.00 0.00 0.00 4.16
1365 1432 4.012895 GCGGTGCTTGTGGTGTCG 62.013 66.667 0.00 0.00 0.00 4.35
1366 1433 2.279851 CGGTGCTTGTGGTGTCGA 60.280 61.111 0.00 0.00 0.00 4.20
1367 1434 1.667830 CGGTGCTTGTGGTGTCGAT 60.668 57.895 0.00 0.00 0.00 3.59
1368 1435 1.626654 CGGTGCTTGTGGTGTCGATC 61.627 60.000 0.00 0.00 0.00 3.69
1369 1436 0.320771 GGTGCTTGTGGTGTCGATCT 60.321 55.000 0.00 0.00 0.00 2.75
1370 1437 1.071605 GTGCTTGTGGTGTCGATCTC 58.928 55.000 0.00 0.00 0.00 2.75
1371 1438 0.678950 TGCTTGTGGTGTCGATCTCA 59.321 50.000 0.00 0.00 0.00 3.27
1378 1448 2.027385 TGGTGTCGATCTCATCCTCTG 58.973 52.381 0.00 0.00 0.00 3.35
1379 1449 2.302260 GGTGTCGATCTCATCCTCTGA 58.698 52.381 0.00 0.00 0.00 3.27
1391 1461 2.105128 CTCTGACCACGCGATCCC 59.895 66.667 15.93 0.00 0.00 3.85
1414 1484 0.107214 CGCCTTCCCCTGATTTGCTA 60.107 55.000 0.00 0.00 0.00 3.49
1415 1485 1.681780 CGCCTTCCCCTGATTTGCTAA 60.682 52.381 0.00 0.00 0.00 3.09
1421 1491 3.430453 TCCCCTGATTTGCTAAGTTTGG 58.570 45.455 0.00 0.00 0.00 3.28
1426 1496 4.378459 CCTGATTTGCTAAGTTTGGTCGTC 60.378 45.833 0.00 0.00 0.00 4.20
1440 1510 1.598924 GGTCGTCCGATTTAGCCTACG 60.599 57.143 0.00 0.00 0.00 3.51
1441 1511 0.029834 TCGTCCGATTTAGCCTACGC 59.970 55.000 0.00 0.00 0.00 4.42
1445 1515 0.248743 CCGATTTAGCCTACGCGTCA 60.249 55.000 18.63 0.96 41.18 4.35
1468 1539 0.178767 TTGGATCAGACTCCATGCCG 59.821 55.000 0.00 0.00 44.66 5.69
1483 1554 2.680913 GCCGTGTGTCTCATGTGGC 61.681 63.158 0.00 0.00 35.65 5.01
1504 1575 1.066093 TCGATTCGCGGCGGATTTA 59.934 52.632 23.46 8.64 41.33 1.40
1508 1579 2.596553 ATTCGCGGCGGATTTACCCA 62.597 55.000 23.46 0.00 34.64 4.51
1565 1636 1.130373 GCTCGCCGATTGATTTGTTCA 59.870 47.619 0.00 0.00 0.00 3.18
1592 1663 0.861837 GCACTCCGAATTATCAGCGG 59.138 55.000 0.00 0.00 46.08 5.52
1595 1666 2.829094 TCCGAATTATCAGCGGGGA 58.171 52.632 0.00 0.00 44.87 4.81
1617 1688 2.237143 CTGGGATCAGTGCTCTGGTTTA 59.763 50.000 15.39 0.00 41.59 2.01
1621 1692 2.113860 TCAGTGCTCTGGTTTATGCC 57.886 50.000 15.39 0.00 41.59 4.40
1622 1693 1.350684 TCAGTGCTCTGGTTTATGCCA 59.649 47.619 15.39 0.00 41.59 4.92
1639 1711 4.511246 ATGCCGGGGGTGCATCAG 62.511 66.667 2.18 0.00 46.04 2.90
1648 1720 2.292267 GGGGTGCATCAGTATGTTCTG 58.708 52.381 0.00 0.00 37.40 3.02
1937 2026 4.065281 GCCTACACCGACGGCACT 62.065 66.667 15.39 0.00 43.25 4.40
1940 2029 1.443872 CTACACCGACGGCACTGTC 60.444 63.158 15.39 0.00 35.49 3.51
1967 2056 6.265876 TCGTTCAGGTATATATTGCCACTGTA 59.734 38.462 8.23 0.00 0.00 2.74
1970 2059 8.557029 GTTCAGGTATATATTGCCACTGTAAAC 58.443 37.037 8.23 0.00 0.00 2.01
1975 2064 8.899771 GGTATATATTGCCACTGTAAACTGTTT 58.100 33.333 10.98 10.98 0.00 2.83
1990 5478 6.759497 AAACTGTTTGATAAGTATCCAGGC 57.241 37.500 4.73 0.00 31.71 4.85
2000 5488 1.969923 AGTATCCAGGCTGAGCTGATC 59.030 52.381 17.94 4.79 0.00 2.92
2001 5489 1.969923 GTATCCAGGCTGAGCTGATCT 59.030 52.381 17.94 0.00 0.00 2.75
2002 5490 0.759959 ATCCAGGCTGAGCTGATCTG 59.240 55.000 17.94 2.72 0.00 2.90
2010 5505 3.212685 GCTGAGCTGATCTGCCTTAAAT 58.787 45.455 19.74 1.32 44.70 1.40
2035 5530 6.855763 ATTGGGCTGAGATGAATTTTACAA 57.144 33.333 0.00 0.00 0.00 2.41
2044 5539 5.733676 AGATGAATTTTACAATGGTTGGCC 58.266 37.500 0.00 0.00 34.12 5.36
2051 5546 8.560355 AATTTTACAATGGTTGGCCTTATTTC 57.440 30.769 3.32 0.00 35.27 2.17
2052 5547 6.672266 TTTACAATGGTTGGCCTTATTTCA 57.328 33.333 3.32 0.00 35.27 2.69
2053 5548 6.865834 TTACAATGGTTGGCCTTATTTCAT 57.134 33.333 3.32 0.00 35.27 2.57
2054 5549 7.962995 TTACAATGGTTGGCCTTATTTCATA 57.037 32.000 3.32 0.00 35.27 2.15
2055 5550 8.546083 TTACAATGGTTGGCCTTATTTCATAT 57.454 30.769 3.32 0.00 35.27 1.78
2059 5555 7.860649 ATGGTTGGCCTTATTTCATATGATT 57.139 32.000 6.17 0.08 35.27 2.57
2095 5591 9.991388 GATGAATACCTAGACATAATCGTAGTC 57.009 37.037 0.00 0.00 0.00 2.59
2096 5592 8.026341 TGAATACCTAGACATAATCGTAGTCG 57.974 38.462 0.00 0.00 37.36 4.18
2110 5606 4.548494 TCGTAGTCGAGTTAACAAATGCA 58.452 39.130 8.61 0.00 41.35 3.96
2111 5607 4.619760 TCGTAGTCGAGTTAACAAATGCAG 59.380 41.667 8.61 0.00 41.35 4.41
2112 5608 4.201589 CGTAGTCGAGTTAACAAATGCAGG 60.202 45.833 8.61 0.00 39.71 4.85
2113 5609 3.740115 AGTCGAGTTAACAAATGCAGGT 58.260 40.909 8.61 0.00 0.00 4.00
2117 5613 6.430000 AGTCGAGTTAACAAATGCAGGTTATT 59.570 34.615 8.61 0.00 30.29 1.40
2118 5614 7.604927 AGTCGAGTTAACAAATGCAGGTTATTA 59.395 33.333 8.61 0.00 30.29 0.98
2120 5616 6.964934 CGAGTTAACAAATGCAGGTTATTACC 59.035 38.462 8.61 0.00 45.39 2.85
2131 5627 5.473162 TGCAGGTTATTACCATATGACATGC 59.527 40.000 17.63 17.63 45.90 4.06
2132 5628 6.691233 TGCAGGTTATTACCATATGACATGCT 60.691 38.462 22.11 1.23 45.89 3.79
2133 5629 8.437440 TGCAGGTTATTACCATATGACATGCTC 61.437 40.741 22.11 4.29 45.89 4.26
2154 5650 6.416514 GCTCTTTGCACAGAATTTTCTTTTG 58.583 36.000 3.79 0.00 42.31 2.44
2155 5651 6.256321 GCTCTTTGCACAGAATTTTCTTTTGA 59.744 34.615 3.79 0.00 42.31 2.69
2156 5652 7.524294 TCTTTGCACAGAATTTTCTTTTGAC 57.476 32.000 0.00 0.00 34.74 3.18
2158 5657 6.645700 TTGCACAGAATTTTCTTTTGACAC 57.354 33.333 0.00 0.00 34.74 3.67
2163 5662 7.479980 CACAGAATTTTCTTTTGACACCTGTA 58.520 34.615 0.00 0.00 34.74 2.74
2164 5663 7.973388 CACAGAATTTTCTTTTGACACCTGTAA 59.027 33.333 0.00 0.00 34.74 2.41
2167 5666 7.973944 AGAATTTTCTTTTGACACCTGTAACAC 59.026 33.333 0.00 0.00 32.55 3.32
2170 5669 4.196193 TCTTTTGACACCTGTAACACTGG 58.804 43.478 1.11 1.11 42.22 4.00
2171 5670 2.631160 TTGACACCTGTAACACTGGG 57.369 50.000 7.09 0.00 41.00 4.45
2178 5677 2.108250 ACCTGTAACACTGGGCTTGAAT 59.892 45.455 7.09 0.00 41.00 2.57
2185 5684 3.844640 ACACTGGGCTTGAATAAGGTTT 58.155 40.909 0.00 0.00 34.40 3.27
2186 5685 4.223144 ACACTGGGCTTGAATAAGGTTTT 58.777 39.130 0.00 0.00 34.40 2.43
2187 5686 5.390387 ACACTGGGCTTGAATAAGGTTTTA 58.610 37.500 0.00 0.00 34.40 1.52
2188 5687 5.476945 ACACTGGGCTTGAATAAGGTTTTAG 59.523 40.000 0.00 0.00 34.40 1.85
2189 5688 5.476945 CACTGGGCTTGAATAAGGTTTTAGT 59.523 40.000 0.00 0.00 34.40 2.24
2190 5689 6.015434 CACTGGGCTTGAATAAGGTTTTAGTT 60.015 38.462 0.00 0.00 34.40 2.24
2191 5690 6.208797 ACTGGGCTTGAATAAGGTTTTAGTTC 59.791 38.462 0.00 0.00 34.40 3.01
2192 5691 6.071984 TGGGCTTGAATAAGGTTTTAGTTCA 58.928 36.000 0.00 0.00 34.40 3.18
2193 5692 6.723977 TGGGCTTGAATAAGGTTTTAGTTCAT 59.276 34.615 0.00 0.00 34.40 2.57
2194 5693 7.093945 TGGGCTTGAATAAGGTTTTAGTTCATC 60.094 37.037 0.00 0.00 34.40 2.92
2195 5694 7.122799 GGGCTTGAATAAGGTTTTAGTTCATCT 59.877 37.037 0.00 0.00 34.40 2.90
2196 5695 8.523658 GGCTTGAATAAGGTTTTAGTTCATCTT 58.476 33.333 0.00 0.00 34.40 2.40
2225 5724 6.612306 CAGAATGGCATGAATCATGATACTG 58.388 40.000 25.77 19.34 43.81 2.74
2226 5725 5.183331 AGAATGGCATGAATCATGATACTGC 59.817 40.000 25.77 20.56 43.81 4.40
2227 5726 3.822940 TGGCATGAATCATGATACTGCA 58.177 40.909 25.77 16.19 43.81 4.41
2233 5732 5.684550 TGAATCATGATACTGCAATGCTC 57.315 39.130 9.04 0.00 0.00 4.26
2234 5733 4.517832 TGAATCATGATACTGCAATGCTCC 59.482 41.667 9.04 0.00 0.00 4.70
2238 5737 4.041938 TCATGATACTGCAATGCTCCCATA 59.958 41.667 6.82 0.00 0.00 2.74
2240 5739 4.790937 TGATACTGCAATGCTCCCATAAA 58.209 39.130 6.82 0.00 0.00 1.40
2242 5741 5.655974 TGATACTGCAATGCTCCCATAAAAA 59.344 36.000 6.82 0.00 0.00 1.94
2245 5744 4.713321 ACTGCAATGCTCCCATAAAAAGAT 59.287 37.500 6.82 0.00 0.00 2.40
2249 5748 5.221303 GCAATGCTCCCATAAAAAGATGCTA 60.221 40.000 0.00 0.00 0.00 3.49
2252 5751 4.640201 TGCTCCCATAAAAAGATGCTACAC 59.360 41.667 0.00 0.00 0.00 2.90
2267 5766 8.375608 AGATGCTACACAGATAAAAATAGCAG 57.624 34.615 9.37 0.00 45.82 4.24
2278 5777 8.892723 CAGATAAAAATAGCAGGTGTGATACAA 58.107 33.333 0.00 0.00 0.00 2.41
2283 5782 7.701539 AAATAGCAGGTGTGATACAAATTCA 57.298 32.000 0.00 0.00 0.00 2.57
2284 5783 7.886629 AATAGCAGGTGTGATACAAATTCAT 57.113 32.000 0.00 0.00 0.00 2.57
2286 5785 5.012239 AGCAGGTGTGATACAAATTCATGT 58.988 37.500 0.00 0.00 37.32 3.21
2290 5789 7.975616 GCAGGTGTGATACAAATTCATGTTATT 59.024 33.333 0.00 0.00 34.75 1.40
2291 5790 9.292846 CAGGTGTGATACAAATTCATGTTATTG 57.707 33.333 0.00 0.00 34.75 1.90
2307 5806 8.946085 TCATGTTATTGTTTCAGTGTAGGATTC 58.054 33.333 0.00 0.00 0.00 2.52
2311 5810 8.443937 GTTATTGTTTCAGTGTAGGATTCTGTC 58.556 37.037 0.00 0.00 0.00 3.51
2325 5824 6.610741 GGATTCTGTCCATTCAATCTGTAC 57.389 41.667 0.00 0.00 46.96 2.90
2327 5826 6.599244 GGATTCTGTCCATTCAATCTGTACAA 59.401 38.462 0.00 0.00 46.96 2.41
2396 5895 4.153958 TGGCTTAAATAAACGTGCAGTG 57.846 40.909 0.00 0.00 0.00 3.66
2397 5896 2.914838 GGCTTAAATAAACGTGCAGTGC 59.085 45.455 8.58 8.58 0.00 4.40
2403 5902 0.856641 TAAACGTGCAGTGCGAGTTC 59.143 50.000 22.54 6.32 31.83 3.01
2407 5906 1.856012 GTGCAGTGCGAGTTCAGTC 59.144 57.895 11.20 0.00 0.00 3.51
2425 5924 4.080356 TCAGTCAGCCAATAGCCAGTTATT 60.080 41.667 0.00 0.00 45.47 1.40
2428 5927 4.757149 GTCAGCCAATAGCCAGTTATTAGG 59.243 45.833 0.00 0.00 45.47 2.69
2429 5928 4.412199 TCAGCCAATAGCCAGTTATTAGGT 59.588 41.667 0.00 0.00 45.47 3.08
2430 5929 4.516698 CAGCCAATAGCCAGTTATTAGGTG 59.483 45.833 0.00 0.00 45.47 4.00
2433 5940 4.516698 CCAATAGCCAGTTATTAGGTGCAG 59.483 45.833 0.00 0.00 0.00 4.41
2448 5955 4.440839 GGTGCAGAAACCTTTAATCCTG 57.559 45.455 0.00 0.00 37.24 3.86
2449 5956 3.826729 GGTGCAGAAACCTTTAATCCTGT 59.173 43.478 0.00 0.00 37.24 4.00
2452 5959 6.015772 GGTGCAGAAACCTTTAATCCTGTTAA 60.016 38.462 0.00 0.00 37.24 2.01
2455 5962 6.571731 GCAGAAACCTTTAATCCTGTTAACCC 60.572 42.308 2.48 0.00 0.00 4.11
2464 5971 8.943594 TTTAATCCTGTTAACCCAATGTACTT 57.056 30.769 2.48 0.00 0.00 2.24
2465 5972 8.943594 TTAATCCTGTTAACCCAATGTACTTT 57.056 30.769 2.48 0.00 0.00 2.66
2466 5973 7.462571 AATCCTGTTAACCCAATGTACTTTC 57.537 36.000 2.48 0.00 0.00 2.62
2467 5974 5.318630 TCCTGTTAACCCAATGTACTTTCC 58.681 41.667 2.48 0.00 0.00 3.13
2468 5975 5.073965 TCCTGTTAACCCAATGTACTTTCCT 59.926 40.000 2.48 0.00 0.00 3.36
2469 5976 5.414765 CCTGTTAACCCAATGTACTTTCCTC 59.585 44.000 2.48 0.00 0.00 3.71
2470 5977 5.942961 TGTTAACCCAATGTACTTTCCTCA 58.057 37.500 2.48 0.00 0.00 3.86
2471 5978 6.001460 TGTTAACCCAATGTACTTTCCTCAG 58.999 40.000 2.48 0.00 0.00 3.35
2475 5982 4.010349 CCCAATGTACTTTCCTCAGTTCC 58.990 47.826 0.00 0.00 0.00 3.62
2478 5985 5.513094 CCAATGTACTTTCCTCAGTTCCTGA 60.513 44.000 0.00 0.00 38.25 3.86
2488 5995 8.561536 TTTCCTCAGTTCCTGATAATACCATA 57.438 34.615 0.00 0.00 39.92 2.74
2492 5999 6.759272 TCAGTTCCTGATAATACCATAGTGC 58.241 40.000 0.00 0.00 35.39 4.40
2495 6002 5.801531 TCCTGATAATACCATAGTGCGTT 57.198 39.130 0.00 0.00 0.00 4.84
2526 6033 6.311200 CCCTACAAAATCAAACTTGCTTATGC 59.689 38.462 0.00 0.00 40.20 3.14
2542 6050 4.083590 GCTTATGCAGGAGCTAGTAATTGC 60.084 45.833 14.85 0.00 42.74 3.56
2543 6051 3.565764 ATGCAGGAGCTAGTAATTGCA 57.434 42.857 13.66 13.66 44.49 4.08
2546 6054 2.352960 GCAGGAGCTAGTAATTGCACAC 59.647 50.000 0.00 0.00 37.91 3.82
2547 6055 2.939103 CAGGAGCTAGTAATTGCACACC 59.061 50.000 0.00 0.17 0.00 4.16
2548 6056 2.840651 AGGAGCTAGTAATTGCACACCT 59.159 45.455 0.00 2.39 0.00 4.00
2550 6058 3.375299 GGAGCTAGTAATTGCACACCTTG 59.625 47.826 0.00 0.00 0.00 3.61
2551 6059 4.003648 GAGCTAGTAATTGCACACCTTGT 58.996 43.478 0.00 0.00 0.00 3.16
2552 6060 4.398319 AGCTAGTAATTGCACACCTTGTT 58.602 39.130 0.00 0.00 0.00 2.83
2553 6061 4.827284 AGCTAGTAATTGCACACCTTGTTT 59.173 37.500 0.00 0.00 0.00 2.83
2554 6062 4.917415 GCTAGTAATTGCACACCTTGTTTG 59.083 41.667 0.00 0.00 0.00 2.93
2555 6063 4.320608 AGTAATTGCACACCTTGTTTGG 57.679 40.909 0.00 0.00 0.00 3.28
2556 6064 3.704061 AGTAATTGCACACCTTGTTTGGT 59.296 39.130 0.00 0.00 41.77 3.67
2558 6066 4.744795 AATTGCACACCTTGTTTGGTTA 57.255 36.364 0.00 0.00 38.45 2.85
2561 6069 4.052159 TGCACACCTTGTTTGGTTATTG 57.948 40.909 0.00 0.00 38.45 1.90
2565 6073 5.689961 GCACACCTTGTTTGGTTATTGTTAG 59.310 40.000 0.00 0.00 38.45 2.34
2566 6074 6.681865 GCACACCTTGTTTGGTTATTGTTAGT 60.682 38.462 0.00 0.00 38.45 2.24
2567 6075 7.262048 CACACCTTGTTTGGTTATTGTTAGTT 58.738 34.615 0.00 0.00 38.45 2.24
2568 6076 7.762159 CACACCTTGTTTGGTTATTGTTAGTTT 59.238 33.333 0.00 0.00 38.45 2.66
2569 6077 7.762159 ACACCTTGTTTGGTTATTGTTAGTTTG 59.238 33.333 0.00 0.00 38.45 2.93
2570 6078 7.762159 CACCTTGTTTGGTTATTGTTAGTTTGT 59.238 33.333 0.00 0.00 38.45 2.83
2571 6079 7.762159 ACCTTGTTTGGTTATTGTTAGTTTGTG 59.238 33.333 0.00 0.00 36.89 3.33
2572 6080 7.976734 CCTTGTTTGGTTATTGTTAGTTTGTGA 59.023 33.333 0.00 0.00 0.00 3.58
2573 6081 9.360093 CTTGTTTGGTTATTGTTAGTTTGTGAA 57.640 29.630 0.00 0.00 0.00 3.18
2574 6082 9.877178 TTGTTTGGTTATTGTTAGTTTGTGAAT 57.123 25.926 0.00 0.00 0.00 2.57
2575 6083 9.522804 TGTTTGGTTATTGTTAGTTTGTGAATC 57.477 29.630 0.00 0.00 0.00 2.52
2576 6084 9.744468 GTTTGGTTATTGTTAGTTTGTGAATCT 57.256 29.630 0.00 0.00 0.00 2.40
2616 6124 9.733556 TTTTATGCACTAGATTCTACTTTTGGA 57.266 29.630 0.00 0.00 0.00 3.53
2617 6125 9.905713 TTTATGCACTAGATTCTACTTTTGGAT 57.094 29.630 0.00 0.00 0.00 3.41
2618 6126 9.905713 TTATGCACTAGATTCTACTTTTGGATT 57.094 29.630 0.00 0.00 0.00 3.01
2619 6127 8.814038 ATGCACTAGATTCTACTTTTGGATTT 57.186 30.769 0.00 0.00 0.00 2.17
2620 6128 8.268850 TGCACTAGATTCTACTTTTGGATTTC 57.731 34.615 0.00 0.00 0.00 2.17
2621 6129 8.103305 TGCACTAGATTCTACTTTTGGATTTCT 58.897 33.333 0.00 0.00 0.00 2.52
2622 6130 8.951243 GCACTAGATTCTACTTTTGGATTTCTT 58.049 33.333 0.00 0.00 0.00 2.52
2716 6224 9.534565 TGCATCAGTAGTATCTCATTTTCTTAC 57.465 33.333 0.00 0.00 0.00 2.34
2717 6225 9.534565 GCATCAGTAGTATCTCATTTTCTTACA 57.465 33.333 0.00 0.00 0.00 2.41
2722 6230 9.319143 AGTAGTATCTCATTTTCTTACATGTGC 57.681 33.333 9.11 0.00 0.00 4.57
2723 6231 9.098355 GTAGTATCTCATTTTCTTACATGTGCA 57.902 33.333 9.11 0.00 0.00 4.57
2724 6232 7.978982 AGTATCTCATTTTCTTACATGTGCAC 58.021 34.615 10.75 10.75 0.00 4.57
2725 6233 7.826252 AGTATCTCATTTTCTTACATGTGCACT 59.174 33.333 19.41 0.00 0.00 4.40
2726 6234 6.245115 TCTCATTTTCTTACATGTGCACTG 57.755 37.500 19.41 15.53 0.00 3.66
2727 6235 5.181811 TCTCATTTTCTTACATGTGCACTGG 59.818 40.000 19.41 12.38 0.00 4.00
2728 6236 4.826733 TCATTTTCTTACATGTGCACTGGT 59.173 37.500 19.41 17.53 0.00 4.00
2729 6237 5.301551 TCATTTTCTTACATGTGCACTGGTT 59.698 36.000 19.41 2.24 0.00 3.67
2730 6238 5.590530 TTTTCTTACATGTGCACTGGTTT 57.409 34.783 19.41 0.39 0.00 3.27
2731 6239 6.701145 TTTTCTTACATGTGCACTGGTTTA 57.299 33.333 19.41 7.01 0.00 2.01
2732 6240 6.892658 TTTCTTACATGTGCACTGGTTTAT 57.107 33.333 19.41 0.00 0.00 1.40
2733 6241 5.878332 TCTTACATGTGCACTGGTTTATG 57.122 39.130 19.41 14.11 0.00 1.90
2734 6242 4.155826 TCTTACATGTGCACTGGTTTATGC 59.844 41.667 19.41 0.00 42.40 3.14
2735 6243 1.545582 ACATGTGCACTGGTTTATGCC 59.454 47.619 19.41 0.00 41.33 4.40
2736 6244 1.820519 CATGTGCACTGGTTTATGCCT 59.179 47.619 19.41 0.00 41.33 4.75
2737 6245 1.246649 TGTGCACTGGTTTATGCCTG 58.753 50.000 19.41 0.00 41.33 4.85
2738 6246 1.247567 GTGCACTGGTTTATGCCTGT 58.752 50.000 10.32 0.00 41.33 4.00
2739 6247 1.613437 GTGCACTGGTTTATGCCTGTT 59.387 47.619 10.32 0.00 41.33 3.16
2740 6248 2.035832 GTGCACTGGTTTATGCCTGTTT 59.964 45.455 10.32 0.00 41.33 2.83
2741 6249 2.295909 TGCACTGGTTTATGCCTGTTTC 59.704 45.455 0.00 0.00 41.33 2.78
2742 6250 2.352715 GCACTGGTTTATGCCTGTTTCC 60.353 50.000 0.00 0.00 38.40 3.13
2743 6251 2.231235 CACTGGTTTATGCCTGTTTCCC 59.769 50.000 0.00 0.00 38.40 3.97
2744 6252 2.110011 ACTGGTTTATGCCTGTTTCCCT 59.890 45.455 0.00 0.00 37.40 4.20
2745 6253 2.493278 CTGGTTTATGCCTGTTTCCCTG 59.507 50.000 0.00 0.00 0.00 4.45
2746 6254 2.109128 TGGTTTATGCCTGTTTCCCTGA 59.891 45.455 0.00 0.00 0.00 3.86
2747 6255 2.755103 GGTTTATGCCTGTTTCCCTGAG 59.245 50.000 0.00 0.00 0.00 3.35
2748 6256 3.421844 GTTTATGCCTGTTTCCCTGAGT 58.578 45.455 0.00 0.00 0.00 3.41
2749 6257 2.787473 TATGCCTGTTTCCCTGAGTG 57.213 50.000 0.00 0.00 0.00 3.51
2750 6258 0.773644 ATGCCTGTTTCCCTGAGTGT 59.226 50.000 0.00 0.00 0.00 3.55
2751 6259 0.108585 TGCCTGTTTCCCTGAGTGTC 59.891 55.000 0.00 0.00 0.00 3.67
2752 6260 0.398318 GCCTGTTTCCCTGAGTGTCT 59.602 55.000 0.00 0.00 0.00 3.41
2753 6261 1.609320 GCCTGTTTCCCTGAGTGTCTC 60.609 57.143 0.00 0.00 0.00 3.36
2754 6262 1.694150 CCTGTTTCCCTGAGTGTCTCA 59.306 52.381 0.00 0.00 38.25 3.27
2776 6284 6.270064 TCAGCATTTATCAAAGCACATCATG 58.730 36.000 0.00 0.00 0.00 3.07
2783 6291 7.936496 TTATCAAAGCACATCATGTCCTAAA 57.064 32.000 0.00 0.00 0.00 1.85
2785 6293 4.458989 TCAAAGCACATCATGTCCTAAACC 59.541 41.667 0.00 0.00 0.00 3.27
2786 6294 4.307032 AAGCACATCATGTCCTAAACCT 57.693 40.909 0.00 0.00 0.00 3.50
2787 6295 5.435686 AAGCACATCATGTCCTAAACCTA 57.564 39.130 0.00 0.00 0.00 3.08
2788 6296 5.636903 AGCACATCATGTCCTAAACCTAT 57.363 39.130 0.00 0.00 0.00 2.57
2789 6297 6.747414 AGCACATCATGTCCTAAACCTATA 57.253 37.500 0.00 0.00 0.00 1.31
2790 6298 6.525629 AGCACATCATGTCCTAAACCTATAC 58.474 40.000 0.00 0.00 0.00 1.47
2791 6299 5.405571 GCACATCATGTCCTAAACCTATACG 59.594 44.000 0.00 0.00 0.00 3.06
2792 6300 5.405571 CACATCATGTCCTAAACCTATACGC 59.594 44.000 0.00 0.00 0.00 4.42
2793 6301 5.304614 ACATCATGTCCTAAACCTATACGCT 59.695 40.000 0.00 0.00 0.00 5.07
2795 6303 5.839621 TCATGTCCTAAACCTATACGCTTC 58.160 41.667 0.00 0.00 0.00 3.86
2796 6304 5.361571 TCATGTCCTAAACCTATACGCTTCA 59.638 40.000 0.00 0.00 0.00 3.02
2797 6305 5.864418 TGTCCTAAACCTATACGCTTCAT 57.136 39.130 0.00 0.00 0.00 2.57
2801 6332 4.814234 CCTAAACCTATACGCTTCATTGCA 59.186 41.667 0.00 0.00 0.00 4.08
2877 6408 2.596452 CACGAGATGAAGTGCTACGTT 58.404 47.619 0.00 0.00 0.00 3.99
2880 6411 1.661112 GAGATGAAGTGCTACGTTGGC 59.339 52.381 0.00 0.00 0.00 4.52
2922 6453 1.447314 CGCCCCGTTCAACTACCTC 60.447 63.158 0.00 0.00 0.00 3.85
2925 6456 0.108945 CCCCGTTCAACTACCTCGAC 60.109 60.000 0.00 0.00 0.00 4.20
2928 6459 1.069378 CGTTCAACTACCTCGACGGC 61.069 60.000 0.00 0.00 35.61 5.68
2931 6462 4.125695 AACTACCTCGACGGCGGC 62.126 66.667 12.58 7.52 38.28 6.53
2937 6468 4.630785 CTCGACGGCGGCGATGAT 62.631 66.667 39.55 16.22 37.13 2.45
2940 6471 2.356313 GACGGCGGCGATGATGAT 60.356 61.111 38.93 14.02 0.00 2.45
2958 6489 0.960364 ATGACGGCGGCAACATCTTT 60.960 50.000 23.82 0.00 0.00 2.52
2961 6492 2.485122 GGCGGCAACATCTTTCCG 59.515 61.111 3.07 0.00 44.29 4.30
2973 6504 2.233305 TCTTTCCGCTTCTCTAGGGT 57.767 50.000 0.00 0.00 35.13 4.34
2975 6506 0.902531 TTTCCGCTTCTCTAGGGTGG 59.097 55.000 0.00 0.00 35.13 4.61
2976 6507 1.614241 TTCCGCTTCTCTAGGGTGGC 61.614 60.000 0.00 0.00 35.13 5.01
2977 6508 2.105128 CGCTTCTCTAGGGTGGCG 59.895 66.667 14.85 14.85 36.89 5.69
2978 6509 2.415608 CGCTTCTCTAGGGTGGCGA 61.416 63.158 20.93 0.00 44.36 5.54
2979 6510 1.439644 GCTTCTCTAGGGTGGCGAG 59.560 63.158 0.00 0.00 0.00 5.03
2982 6513 2.759973 CTCTAGGGTGGCGAGGCA 60.760 66.667 0.00 0.00 0.00 4.75
2983 6514 2.759973 TCTAGGGTGGCGAGGCAG 60.760 66.667 0.00 0.00 0.00 4.85
2984 6515 2.759973 CTAGGGTGGCGAGGCAGA 60.760 66.667 0.00 0.00 0.00 4.26
2985 6516 3.075005 TAGGGTGGCGAGGCAGAC 61.075 66.667 0.00 0.00 0.00 3.51
2994 6525 2.294078 CGAGGCAGACCCCTTCCTT 61.294 63.158 0.00 0.00 36.14 3.36
2996 6527 1.916206 GAGGCAGACCCCTTCCTTCC 61.916 65.000 0.00 0.00 36.14 3.46
2998 6529 2.269241 CAGACCCCTTCCTTCCGC 59.731 66.667 0.00 0.00 0.00 5.54
2999 6530 3.009714 AGACCCCTTCCTTCCGCC 61.010 66.667 0.00 0.00 0.00 6.13
3001 6532 4.677151 ACCCCTTCCTTCCGCCCT 62.677 66.667 0.00 0.00 0.00 5.19
3004 6535 4.803908 CCTTCCTTCCGCCCTGGC 62.804 72.222 0.00 0.00 37.80 4.85
3025 6556 3.451556 ATGGTGGCGCTCTGATCCG 62.452 63.158 7.64 0.00 0.00 4.18
3047 6578 0.597637 CTCGCCCGGTTAGCTGTATG 60.598 60.000 0.00 0.00 0.00 2.39
3071 6602 8.615878 TGTTAATAAGCAGACTGTATGTTGTT 57.384 30.769 3.99 5.07 0.00 2.83
3072 6603 9.062524 TGTTAATAAGCAGACTGTATGTTGTTT 57.937 29.630 3.99 0.00 0.00 2.83
3078 6609 7.133891 AGCAGACTGTATGTTGTTTAATGTC 57.866 36.000 3.99 0.00 0.00 3.06
3081 6612 7.413000 GCAGACTGTATGTTGTTTAATGTCGAT 60.413 37.037 3.99 0.00 0.00 3.59
3084 6615 6.093495 ACTGTATGTTGTTTAATGTCGATGGG 59.907 38.462 0.00 0.00 0.00 4.00
3089 6620 1.098712 TTTAATGTCGATGGGCGCCC 61.099 55.000 39.40 39.40 40.61 6.13
3093 6624 4.517815 GTCGATGGGCGCCCGTAA 62.518 66.667 39.75 27.24 40.61 3.18
3102 6633 0.306533 GGCGCCCGTAAATATGTGTG 59.693 55.000 18.11 0.00 0.00 3.82
3129 6660 8.992073 TGCAGATGTATGTAAATAGCATAAGTG 58.008 33.333 0.00 0.00 31.54 3.16
3195 6726 9.817809 ATAATGACATGATACAGAAGTTTACGT 57.182 29.630 0.00 0.00 0.00 3.57
3196 6727 8.547967 AATGACATGATACAGAAGTTTACGTT 57.452 30.769 0.00 0.00 0.00 3.99
3197 6728 7.956420 TGACATGATACAGAAGTTTACGTTT 57.044 32.000 0.00 0.00 0.00 3.60
3198 6729 8.014322 TGACATGATACAGAAGTTTACGTTTC 57.986 34.615 0.00 0.00 0.00 2.78
3199 6730 7.870954 TGACATGATACAGAAGTTTACGTTTCT 59.129 33.333 0.00 0.00 34.09 2.52
3205 6736 5.986004 CAGAAGTTTACGTTTCTGGACTT 57.014 39.130 16.53 8.18 44.06 3.01
3206 6737 5.975442 CAGAAGTTTACGTTTCTGGACTTC 58.025 41.667 16.53 14.57 44.06 3.01
3207 6738 5.050295 CAGAAGTTTACGTTTCTGGACTTCC 60.050 44.000 16.53 0.00 44.06 3.46
3208 6739 3.736720 AGTTTACGTTTCTGGACTTCCC 58.263 45.455 0.00 0.00 34.29 3.97
3294 6827 3.489059 GGCATCAAACCACCATTACATCG 60.489 47.826 0.00 0.00 0.00 3.84
3349 6883 4.285517 CCTATCCAGCCTAATCATCACACT 59.714 45.833 0.00 0.00 0.00 3.55
3384 6918 5.263599 TCACCACATTAGGATGCTTCAAAT 58.736 37.500 0.00 0.00 36.72 2.32
3399 6933 5.163468 TGCTTCAAATTGTCCAAAACTAGCA 60.163 36.000 0.00 0.00 0.00 3.49
3422 6956 3.273788 AAGGGCCTAGTGCTGTGCC 62.274 63.158 6.41 0.00 43.26 5.01
3452 6986 7.690256 ACAAAGGTATCAACAGACTAAAGGAT 58.310 34.615 0.00 0.00 0.00 3.24
3534 7068 0.254178 AATCCTTCTCACATGCGGCT 59.746 50.000 0.00 0.00 0.00 5.52
3554 7088 0.918983 CCAAACCATGCCCTCCTCTA 59.081 55.000 0.00 0.00 0.00 2.43
3639 7174 5.010415 CCTCTTTTCTGCAGATTTTTCCTGT 59.990 40.000 19.04 0.00 34.29 4.00
3672 7207 8.250143 AGGGAACAAACAAGAAAGATAATGTT 57.750 30.769 0.00 0.00 37.59 2.71
3689 7224 8.394822 AGATAATGTTAGTAGGATCTCTAGGCA 58.605 37.037 0.00 0.00 0.00 4.75
3690 7225 9.196139 GATAATGTTAGTAGGATCTCTAGGCAT 57.804 37.037 0.00 0.00 0.00 4.40
3789 7324 8.978472 ACAACTACTCTATCTTTGCCAGTATAA 58.022 33.333 0.00 0.00 0.00 0.98
3900 7435 8.155821 ACTTAGCTAAGGAACAAGAGAAAAAC 57.844 34.615 31.67 0.00 37.62 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 39 9.448438 AAAAGCAAGATATGACTTGTGTATGTA 57.552 29.630 0.00 0.00 45.98 2.29
38 44 7.042797 ACAAAAAGCAAGATATGACTTGTGT 57.957 32.000 0.00 0.00 45.98 3.72
90 111 3.802139 TCTGTCACCGATGATAAATTCGC 59.198 43.478 0.00 0.00 37.14 4.70
96 117 4.122046 CAGCATTCTGTCACCGATGATAA 58.878 43.478 0.00 0.00 37.14 1.75
145 166 0.173481 TCTTCGTCGCCCTTCATCAG 59.827 55.000 0.00 0.00 0.00 2.90
166 187 0.169672 ATGCTGCTGAACATGAACGC 59.830 50.000 0.00 0.00 0.00 4.84
214 235 5.200454 CGCAAAGATAAAATCGTCCATCAG 58.800 41.667 0.00 0.00 0.00 2.90
296 317 1.673337 TCGTCGTCCGTGTCCTCAT 60.673 57.895 0.00 0.00 37.94 2.90
327 348 1.226435 CTCTTCGTCGCCTTCCTCG 60.226 63.158 0.00 0.00 0.00 4.63
339 360 1.327303 CCTCCTCATCCTCCTCTTCG 58.673 60.000 0.00 0.00 0.00 3.79
388 409 2.416432 CCCCCTCGTCGTCTTCTCC 61.416 68.421 0.00 0.00 0.00 3.71
389 410 3.198582 CCCCCTCGTCGTCTTCTC 58.801 66.667 0.00 0.00 0.00 2.87
427 448 1.103015 GATCAATCGTCGTCGTCGTC 58.897 55.000 11.41 0.00 38.33 4.20
428 449 0.585764 CGATCAATCGTCGTCGTCGT 60.586 55.000 11.41 0.00 44.74 4.34
429 450 2.105858 CGATCAATCGTCGTCGTCG 58.894 57.895 5.50 5.50 44.74 5.12
452 473 0.108774 GTAAGGGGTGCTATGAGGCC 59.891 60.000 0.00 0.00 0.00 5.19
475 496 1.479757 GCCCACCCTTGTTTGAGGTAA 60.480 52.381 0.00 0.00 34.88 2.85
476 497 0.111639 GCCCACCCTTGTTTGAGGTA 59.888 55.000 0.00 0.00 34.88 3.08
479 500 1.515521 GACGCCCACCCTTGTTTGAG 61.516 60.000 0.00 0.00 0.00 3.02
480 501 1.527380 GACGCCCACCCTTGTTTGA 60.527 57.895 0.00 0.00 0.00 2.69
481 502 2.561037 GGACGCCCACCCTTGTTTG 61.561 63.158 0.00 0.00 0.00 2.93
482 503 2.203437 GGACGCCCACCCTTGTTT 60.203 61.111 0.00 0.00 0.00 2.83
483 504 2.292785 AAAGGACGCCCACCCTTGTT 62.293 55.000 0.00 0.00 41.61 2.83
484 505 2.292785 AAAAGGACGCCCACCCTTGT 62.293 55.000 0.00 0.00 41.61 3.16
485 506 1.530655 AAAAGGACGCCCACCCTTG 60.531 57.895 0.00 0.00 41.61 3.61
486 507 1.530655 CAAAAGGACGCCCACCCTT 60.531 57.895 0.00 0.00 44.13 3.95
487 508 2.115266 CAAAAGGACGCCCACCCT 59.885 61.111 0.00 0.00 33.88 4.34
488 509 2.114411 TCAAAAGGACGCCCACCC 59.886 61.111 0.00 0.00 33.88 4.61
489 510 3.351450 GTCAAAAGGACGCCCACC 58.649 61.111 0.00 0.00 36.65 4.61
513 534 5.296780 TGCCTATGTACAAGAAAGCTAATGC 59.703 40.000 0.00 0.00 40.05 3.56
514 535 6.540189 AGTGCCTATGTACAAGAAAGCTAATG 59.460 38.462 0.00 0.00 0.00 1.90
515 536 6.653989 AGTGCCTATGTACAAGAAAGCTAAT 58.346 36.000 0.00 0.00 0.00 1.73
516 537 6.049955 AGTGCCTATGTACAAGAAAGCTAA 57.950 37.500 0.00 0.00 0.00 3.09
517 538 5.422331 AGAGTGCCTATGTACAAGAAAGCTA 59.578 40.000 0.00 0.00 0.00 3.32
518 539 4.223923 AGAGTGCCTATGTACAAGAAAGCT 59.776 41.667 0.00 0.00 0.00 3.74
519 540 4.508662 AGAGTGCCTATGTACAAGAAAGC 58.491 43.478 0.00 0.00 0.00 3.51
520 541 5.112686 GGAGAGTGCCTATGTACAAGAAAG 58.887 45.833 0.00 0.00 0.00 2.62
521 542 4.530553 TGGAGAGTGCCTATGTACAAGAAA 59.469 41.667 0.00 0.00 0.00 2.52
544 566 2.834549 CACCACTCAACTATCCTGGACT 59.165 50.000 0.00 0.00 0.00 3.85
566 588 5.472137 ACATTTACACCAACACCACTATCAC 59.528 40.000 0.00 0.00 0.00 3.06
568 590 6.569179 AACATTTACACCAACACCACTATC 57.431 37.500 0.00 0.00 0.00 2.08
569 591 6.737346 GCAAACATTTACACCAACACCACTAT 60.737 38.462 0.00 0.00 0.00 2.12
570 592 5.450688 GCAAACATTTACACCAACACCACTA 60.451 40.000 0.00 0.00 0.00 2.74
571 593 4.679372 GCAAACATTTACACCAACACCACT 60.679 41.667 0.00 0.00 0.00 4.00
572 594 3.553917 GCAAACATTTACACCAACACCAC 59.446 43.478 0.00 0.00 0.00 4.16
573 595 3.449018 AGCAAACATTTACACCAACACCA 59.551 39.130 0.00 0.00 0.00 4.17
574 596 3.801594 CAGCAAACATTTACACCAACACC 59.198 43.478 0.00 0.00 0.00 4.16
692 717 2.498887 CGGGCGCGTTTCGAAAAG 60.499 61.111 17.96 17.96 41.67 2.27
722 749 4.087956 TCAAACGAAATTCATGCGAATCG 58.912 39.130 0.00 0.00 41.12 3.34
831 859 2.183046 GCCTCAGAGCCGAGTCAC 59.817 66.667 0.00 0.00 0.00 3.67
834 862 2.036414 TCAGCCTCAGAGCCGAGT 59.964 61.111 0.00 0.00 0.00 4.18
918 954 4.964555 GTGAAAGAGAAGCGAAAGACAAAC 59.035 41.667 0.00 0.00 0.00 2.93
970 1006 2.084546 CGGCGAGAAGATTCCCTTTTT 58.915 47.619 0.00 0.00 34.68 1.94
994 1035 4.570663 GACGGACTCCATCGGCGG 62.571 72.222 7.21 0.00 0.00 6.13
1126 1167 2.790039 GGGTAGGGGTAGGGTGGT 59.210 66.667 0.00 0.00 0.00 4.16
1129 1170 1.231231 AGAGGGGTAGGGGTAGGGT 60.231 63.158 0.00 0.00 0.00 4.34
1130 1171 1.547760 GAGAGGGGTAGGGGTAGGG 59.452 68.421 0.00 0.00 0.00 3.53
1131 1172 1.547760 GGAGAGGGGTAGGGGTAGG 59.452 68.421 0.00 0.00 0.00 3.18
1133 1174 2.397902 CGGGAGAGGGGTAGGGGTA 61.398 68.421 0.00 0.00 0.00 3.69
1134 1175 3.763757 CGGGAGAGGGGTAGGGGT 61.764 72.222 0.00 0.00 0.00 4.95
1158 1199 3.726517 CACCGGCAGCAGAAACCG 61.727 66.667 0.00 0.00 46.50 4.44
1159 1200 4.043200 GCACCGGCAGCAGAAACC 62.043 66.667 14.06 0.00 40.72 3.27
1178 1227 0.893727 AAGGCAAACGGGGACACATC 60.894 55.000 0.00 0.00 0.00 3.06
1237 1289 4.452733 CGAAGACCGCCTGGACCC 62.453 72.222 0.00 0.00 39.21 4.46
1238 1290 3.644399 GACGAAGACCGCCTGGACC 62.644 68.421 0.00 0.00 43.32 4.46
1249 1307 2.697761 CGCTCCCCGAAGACGAAGA 61.698 63.158 0.00 0.00 42.66 2.87
1250 1308 2.202623 CGCTCCCCGAAGACGAAG 60.203 66.667 0.00 0.00 42.66 3.79
1251 1309 4.430765 GCGCTCCCCGAAGACGAA 62.431 66.667 0.00 0.00 42.66 3.85
1308 1366 2.762043 AAGGGCGAGAGGGAGAGC 60.762 66.667 0.00 0.00 0.00 4.09
1315 1373 1.519719 CCTTGGAGAAGGGCGAGAG 59.480 63.158 0.00 0.00 44.76 3.20
1346 1404 4.497984 ACACCACAAGCACCGCCA 62.498 61.111 0.00 0.00 0.00 5.69
1354 1421 2.167281 AGGATGAGATCGACACCACAAG 59.833 50.000 0.00 0.00 0.00 3.16
1355 1422 2.166459 GAGGATGAGATCGACACCACAA 59.834 50.000 0.00 0.00 0.00 3.33
1356 1423 1.751351 GAGGATGAGATCGACACCACA 59.249 52.381 0.00 0.00 0.00 4.17
1358 1425 2.027385 CAGAGGATGAGATCGACACCA 58.973 52.381 0.00 0.00 0.00 4.17
1359 1426 2.034053 GTCAGAGGATGAGATCGACACC 59.966 54.545 0.00 0.00 39.07 4.16
1360 1427 2.034053 GGTCAGAGGATGAGATCGACAC 59.966 54.545 0.00 0.00 39.07 3.67
1361 1428 2.302260 GGTCAGAGGATGAGATCGACA 58.698 52.381 0.00 0.00 39.07 4.35
1362 1429 2.034053 GTGGTCAGAGGATGAGATCGAC 59.966 54.545 0.00 0.00 39.07 4.20
1363 1430 2.302260 GTGGTCAGAGGATGAGATCGA 58.698 52.381 0.00 0.00 39.07 3.59
1365 1432 1.269517 GCGTGGTCAGAGGATGAGATC 60.270 57.143 0.00 0.00 39.07 2.75
1366 1433 0.749649 GCGTGGTCAGAGGATGAGAT 59.250 55.000 0.00 0.00 39.07 2.75
1367 1434 1.657751 CGCGTGGTCAGAGGATGAGA 61.658 60.000 0.00 0.00 39.07 3.27
1368 1435 1.226802 CGCGTGGTCAGAGGATGAG 60.227 63.158 0.00 0.00 39.07 2.90
1369 1436 1.037579 ATCGCGTGGTCAGAGGATGA 61.038 55.000 5.77 0.00 34.79 2.92
1370 1437 0.596083 GATCGCGTGGTCAGAGGATG 60.596 60.000 5.77 0.00 0.00 3.51
1371 1438 1.736586 GATCGCGTGGTCAGAGGAT 59.263 57.895 5.77 0.00 0.00 3.24
1391 1461 3.976701 AATCAGGGGAAGGCGCGTG 62.977 63.158 8.43 0.00 42.19 5.34
1414 1484 2.740447 GCTAAATCGGACGACCAAACTT 59.260 45.455 4.48 0.00 35.59 2.66
1415 1485 2.344025 GCTAAATCGGACGACCAAACT 58.656 47.619 4.48 0.00 35.59 2.66
1421 1491 1.751552 CGTAGGCTAAATCGGACGAC 58.248 55.000 0.00 0.00 32.20 4.34
1426 1496 0.248743 TGACGCGTAGGCTAAATCGG 60.249 55.000 13.97 4.13 36.88 4.18
1440 1510 1.071605 GTCTGATCCAACAGTGACGC 58.928 55.000 0.00 0.00 38.79 5.19
1441 1511 2.600731 GAGTCTGATCCAACAGTGACG 58.399 52.381 0.00 0.00 38.79 4.35
1468 1539 1.291877 GACCGCCACATGAGACACAC 61.292 60.000 0.00 0.00 0.00 3.82
1508 1579 1.444895 CGAAAACCGTCGGGATCGT 60.445 57.895 17.28 0.00 37.37 3.73
1565 1636 6.114187 TGATAATTCGGAGTGCTATCCAAT 57.886 37.500 8.27 4.79 39.53 3.16
1639 1711 2.675348 GTCAGCTGAAGGCAGAACATAC 59.325 50.000 20.19 0.00 45.17 2.39
1648 1720 1.079503 CTAAACCGTCAGCTGAAGGC 58.920 55.000 38.52 18.80 45.74 4.35
1661 1738 1.398390 CCGATCAGCAACAGCTAAACC 59.602 52.381 0.00 0.00 36.70 3.27
1679 1768 2.107750 AGATGCCACAGCGATCCG 59.892 61.111 0.00 0.00 44.31 4.18
1937 2026 6.183360 TGGCAATATATACCTGAACGAAGACA 60.183 38.462 0.00 0.00 0.00 3.41
1940 2029 6.146184 CAGTGGCAATATATACCTGAACGAAG 59.854 42.308 0.00 0.00 0.00 3.79
1967 2056 6.375455 CAGCCTGGATACTTATCAAACAGTTT 59.625 38.462 0.00 0.00 34.40 2.66
1970 2059 5.674525 TCAGCCTGGATACTTATCAAACAG 58.325 41.667 0.00 0.00 34.40 3.16
1975 2064 3.323115 CAGCTCAGCCTGGATACTTATCA 59.677 47.826 0.00 0.00 34.40 2.15
1990 5478 7.361127 CAATTATTTAAGGCAGATCAGCTCAG 58.639 38.462 10.16 0.00 34.17 3.35
2000 5488 4.889409 TCTCAGCCCAATTATTTAAGGCAG 59.111 41.667 11.45 5.27 46.35 4.85
2001 5489 4.865905 TCTCAGCCCAATTATTTAAGGCA 58.134 39.130 11.45 0.00 46.35 4.75
2002 5490 5.536161 TCATCTCAGCCCAATTATTTAAGGC 59.464 40.000 3.07 3.07 44.20 4.35
2003 5491 7.587037 TTCATCTCAGCCCAATTATTTAAGG 57.413 36.000 0.00 0.00 0.00 2.69
2010 5505 7.953005 TGTAAAATTCATCTCAGCCCAATTA 57.047 32.000 0.00 0.00 0.00 1.40
2035 5530 7.860649 AATCATATGAAATAAGGCCAACCAT 57.139 32.000 9.99 1.91 39.06 3.55
2059 5555 8.706322 TGTCTAGGTATTCATCAGCTATTGTA 57.294 34.615 0.00 0.00 0.00 2.41
2064 5560 8.678199 CGATTATGTCTAGGTATTCATCAGCTA 58.322 37.037 0.00 0.00 0.00 3.32
2067 5563 9.995957 CTACGATTATGTCTAGGTATTCATCAG 57.004 37.037 0.00 0.00 0.00 2.90
2089 5585 4.201589 CCTGCATTTGTTAACTCGACTACG 60.202 45.833 7.22 0.00 41.26 3.51
2095 5591 6.964934 GGTAATAACCTGCATTTGTTAACTCG 59.035 38.462 7.22 0.00 43.08 4.18
2096 5592 7.822658 TGGTAATAACCTGCATTTGTTAACTC 58.177 34.615 7.22 5.14 46.91 3.01
2100 5596 9.634021 TCATATGGTAATAACCTGCATTTGTTA 57.366 29.630 2.13 6.20 46.91 2.41
2101 5597 8.413229 GTCATATGGTAATAACCTGCATTTGTT 58.587 33.333 2.13 0.00 46.91 2.83
2102 5598 7.559533 TGTCATATGGTAATAACCTGCATTTGT 59.440 33.333 2.13 0.00 46.91 2.83
2103 5599 7.939782 TGTCATATGGTAATAACCTGCATTTG 58.060 34.615 2.13 0.00 46.91 2.32
2104 5600 8.579006 CATGTCATATGGTAATAACCTGCATTT 58.421 33.333 2.13 0.00 46.91 2.32
2105 5601 7.309377 GCATGTCATATGGTAATAACCTGCATT 60.309 37.037 12.32 0.00 46.91 3.56
2106 5602 6.151648 GCATGTCATATGGTAATAACCTGCAT 59.848 38.462 12.32 0.00 46.91 3.96
2108 5604 5.707298 AGCATGTCATATGGTAATAACCTGC 59.293 40.000 2.13 7.38 46.91 4.85
2109 5605 7.164122 AGAGCATGTCATATGGTAATAACCTG 58.836 38.462 2.13 0.00 46.91 4.00
2110 5606 7.321717 AGAGCATGTCATATGGTAATAACCT 57.678 36.000 2.13 0.00 46.91 3.50
2111 5607 7.986085 AAGAGCATGTCATATGGTAATAACC 57.014 36.000 2.13 0.00 46.98 2.85
2112 5608 7.805071 GCAAAGAGCATGTCATATGGTAATAAC 59.195 37.037 2.13 0.00 44.79 1.89
2113 5609 7.874940 GCAAAGAGCATGTCATATGGTAATAA 58.125 34.615 2.13 0.00 44.79 1.40
2125 5621 8.421870 AAGAAAATTCTGTGCAAAGAGCATGTC 61.422 37.037 6.70 2.61 46.28 3.06
2126 5622 6.684613 AAGAAAATTCTGTGCAAAGAGCATGT 60.685 34.615 6.70 0.00 46.28 3.21
2127 5623 5.694910 AAGAAAATTCTGTGCAAAGAGCATG 59.305 36.000 6.70 0.00 46.28 4.06
2128 5624 5.850614 AAGAAAATTCTGTGCAAAGAGCAT 58.149 33.333 6.70 0.00 46.28 3.79
2129 5625 4.924305 AGAAAATTCTGTGCAAAGAGCA 57.076 36.364 6.70 0.00 43.42 4.26
2130 5626 6.256321 TCAAAAGAAAATTCTGTGCAAAGAGC 59.744 34.615 6.70 0.00 39.89 4.09
2131 5627 7.276218 TGTCAAAAGAAAATTCTGTGCAAAGAG 59.724 33.333 6.70 0.00 37.65 2.85
2132 5628 7.063308 GTGTCAAAAGAAAATTCTGTGCAAAGA 59.937 33.333 1.21 1.21 37.65 2.52
2133 5629 7.175410 GTGTCAAAAGAAAATTCTGTGCAAAG 58.825 34.615 0.00 0.00 37.65 2.77
2134 5630 6.091986 GGTGTCAAAAGAAAATTCTGTGCAAA 59.908 34.615 0.00 0.00 37.65 3.68
2140 5636 7.973388 TGTTACAGGTGTCAAAAGAAAATTCTG 59.027 33.333 0.00 0.00 37.65 3.02
2148 5644 4.196193 CCAGTGTTACAGGTGTCAAAAGA 58.804 43.478 0.00 0.00 0.00 2.52
2150 5646 3.283751 CCCAGTGTTACAGGTGTCAAAA 58.716 45.455 0.00 0.00 0.00 2.44
2154 5650 0.396811 AGCCCAGTGTTACAGGTGTC 59.603 55.000 0.00 0.00 0.00 3.67
2155 5651 0.843984 AAGCCCAGTGTTACAGGTGT 59.156 50.000 0.00 0.00 0.00 4.16
2156 5652 1.202758 TCAAGCCCAGTGTTACAGGTG 60.203 52.381 0.00 0.00 0.00 4.00
2158 5657 2.270352 TTCAAGCCCAGTGTTACAGG 57.730 50.000 0.00 0.00 0.00 4.00
2163 5662 3.525800 ACCTTATTCAAGCCCAGTGTT 57.474 42.857 0.00 0.00 0.00 3.32
2164 5663 3.525800 AACCTTATTCAAGCCCAGTGT 57.474 42.857 0.00 0.00 0.00 3.55
2167 5666 6.208599 TGAACTAAAACCTTATTCAAGCCCAG 59.791 38.462 0.00 0.00 0.00 4.45
2170 5669 8.056407 AGATGAACTAAAACCTTATTCAAGCC 57.944 34.615 0.00 0.00 33.29 4.35
2185 5684 7.801104 TGCCATTCTGGTATAAGATGAACTAA 58.199 34.615 0.00 0.00 40.46 2.24
2186 5685 7.373617 TGCCATTCTGGTATAAGATGAACTA 57.626 36.000 0.00 0.00 40.46 2.24
2187 5686 6.252599 TGCCATTCTGGTATAAGATGAACT 57.747 37.500 0.00 0.00 40.46 3.01
2188 5687 6.712095 TCATGCCATTCTGGTATAAGATGAAC 59.288 38.462 0.00 0.00 41.03 3.18
2189 5688 6.840527 TCATGCCATTCTGGTATAAGATGAA 58.159 36.000 0.00 0.00 41.03 2.57
2190 5689 6.438186 TCATGCCATTCTGGTATAAGATGA 57.562 37.500 0.00 0.00 41.03 2.92
2191 5690 7.392393 TGATTCATGCCATTCTGGTATAAGATG 59.608 37.037 0.00 0.00 41.03 2.90
2192 5691 7.464273 TGATTCATGCCATTCTGGTATAAGAT 58.536 34.615 0.00 0.00 41.03 2.40
2193 5692 6.840527 TGATTCATGCCATTCTGGTATAAGA 58.159 36.000 0.00 0.00 41.03 2.10
2194 5693 7.392393 TCATGATTCATGCCATTCTGGTATAAG 59.608 37.037 19.74 0.00 41.03 1.73
2195 5694 7.232910 TCATGATTCATGCCATTCTGGTATAA 58.767 34.615 19.74 0.00 41.03 0.98
2196 5695 6.781943 TCATGATTCATGCCATTCTGGTATA 58.218 36.000 19.74 0.00 41.03 1.47
2197 5696 5.637127 TCATGATTCATGCCATTCTGGTAT 58.363 37.500 19.74 0.00 43.89 2.73
2198 5697 5.051409 TCATGATTCATGCCATTCTGGTA 57.949 39.130 19.74 0.00 41.18 3.25
2199 5698 3.905968 TCATGATTCATGCCATTCTGGT 58.094 40.909 19.74 0.00 41.18 4.00
2200 5699 5.710567 AGTATCATGATTCATGCCATTCTGG 59.289 40.000 19.74 0.00 41.18 3.86
2201 5700 6.612306 CAGTATCATGATTCATGCCATTCTG 58.388 40.000 19.74 16.76 41.18 3.02
2202 5701 5.183331 GCAGTATCATGATTCATGCCATTCT 59.817 40.000 19.74 10.51 41.18 2.40
2203 5702 5.048294 TGCAGTATCATGATTCATGCCATTC 60.048 40.000 24.75 8.71 41.18 2.67
2204 5703 4.830600 TGCAGTATCATGATTCATGCCATT 59.169 37.500 24.75 8.53 41.18 3.16
2205 5704 4.403734 TGCAGTATCATGATTCATGCCAT 58.596 39.130 24.75 12.43 41.18 4.40
2206 5705 3.822940 TGCAGTATCATGATTCATGCCA 58.177 40.909 24.75 15.76 41.18 4.92
2207 5706 4.841443 TTGCAGTATCATGATTCATGCC 57.159 40.909 24.75 10.97 41.18 4.40
2208 5707 4.621460 GCATTGCAGTATCATGATTCATGC 59.379 41.667 22.68 22.68 41.18 4.06
2209 5708 6.013842 AGCATTGCAGTATCATGATTCATG 57.986 37.500 18.71 18.71 42.60 3.07
2210 5709 5.183331 GGAGCATTGCAGTATCATGATTCAT 59.817 40.000 14.65 0.00 0.00 2.57
2211 5710 4.517832 GGAGCATTGCAGTATCATGATTCA 59.482 41.667 14.65 4.69 0.00 2.57
2212 5711 4.082895 GGGAGCATTGCAGTATCATGATTC 60.083 45.833 14.65 9.02 0.00 2.52
2213 5712 3.825014 GGGAGCATTGCAGTATCATGATT 59.175 43.478 14.65 0.00 0.00 2.57
2215 5714 2.173143 TGGGAGCATTGCAGTATCATGA 59.827 45.455 11.91 0.00 0.00 3.07
2218 5717 4.436113 TTATGGGAGCATTGCAGTATCA 57.564 40.909 11.91 2.39 0.00 2.15
2225 5724 3.805971 GCATCTTTTTATGGGAGCATTGC 59.194 43.478 0.00 0.00 0.00 3.56
2226 5725 5.272283 AGCATCTTTTTATGGGAGCATTG 57.728 39.130 0.00 0.00 0.00 2.82
2227 5726 5.893255 TGTAGCATCTTTTTATGGGAGCATT 59.107 36.000 0.00 0.00 0.00 3.56
2233 5732 6.949352 ATCTGTGTAGCATCTTTTTATGGG 57.051 37.500 0.00 0.00 0.00 4.00
2240 5739 9.177608 TGCTATTTTTATCTGTGTAGCATCTTT 57.822 29.630 0.00 0.00 39.46 2.52
2242 5741 7.443575 CCTGCTATTTTTATCTGTGTAGCATCT 59.556 37.037 5.48 0.00 42.28 2.90
2245 5744 6.316140 CACCTGCTATTTTTATCTGTGTAGCA 59.684 38.462 5.00 5.00 41.35 3.49
2249 5748 6.237901 TCACACCTGCTATTTTTATCTGTGT 58.762 36.000 0.00 0.00 35.00 3.72
2252 5751 8.437360 TGTATCACACCTGCTATTTTTATCTG 57.563 34.615 0.00 0.00 0.00 2.90
2260 5759 7.340232 ACATGAATTTGTATCACACCTGCTATT 59.660 33.333 0.00 0.00 0.00 1.73
2267 5766 9.638239 AACAATAACATGAATTTGTATCACACC 57.362 29.630 0.00 0.00 32.31 4.16
2278 5777 9.295825 TCCTACACTGAAACAATAACATGAATT 57.704 29.630 0.00 0.00 0.00 2.17
2283 5782 8.950210 CAGAATCCTACACTGAAACAATAACAT 58.050 33.333 0.00 0.00 34.07 2.71
2284 5783 7.936847 ACAGAATCCTACACTGAAACAATAACA 59.063 33.333 0.00 0.00 35.85 2.41
2286 5785 7.606456 GGACAGAATCCTACACTGAAACAATAA 59.394 37.037 0.00 0.00 45.22 1.40
2290 5789 4.894784 GGACAGAATCCTACACTGAAACA 58.105 43.478 0.00 0.00 45.22 2.83
2307 5806 9.778993 CTAAATTTGTACAGATTGAATGGACAG 57.221 33.333 12.02 0.00 42.33 3.51
2366 5865 9.291664 GCACGTTTATTTAAGCCATTGTTAATA 57.708 29.630 0.00 0.00 0.00 0.98
2367 5866 7.815068 TGCACGTTTATTTAAGCCATTGTTAAT 59.185 29.630 0.00 0.00 0.00 1.40
2368 5867 7.145985 TGCACGTTTATTTAAGCCATTGTTAA 58.854 30.769 0.00 0.00 0.00 2.01
2369 5868 6.678878 TGCACGTTTATTTAAGCCATTGTTA 58.321 32.000 0.00 0.00 0.00 2.41
2370 5869 5.533482 TGCACGTTTATTTAAGCCATTGTT 58.467 33.333 0.00 0.00 0.00 2.83
2371 5870 5.127693 TGCACGTTTATTTAAGCCATTGT 57.872 34.783 0.00 0.00 0.00 2.71
2372 5871 5.060816 CACTGCACGTTTATTTAAGCCATTG 59.939 40.000 0.00 0.00 0.00 2.82
2375 5874 3.610585 GCACTGCACGTTTATTTAAGCCA 60.611 43.478 0.00 0.00 0.00 4.75
2380 5879 3.061322 ACTCGCACTGCACGTTTATTTA 58.939 40.909 1.11 0.00 0.00 1.40
2387 5886 1.951130 CTGAACTCGCACTGCACGT 60.951 57.895 1.11 0.00 0.00 4.49
2396 5895 1.929836 CTATTGGCTGACTGAACTCGC 59.070 52.381 0.00 0.00 0.00 5.03
2397 5896 1.929836 GCTATTGGCTGACTGAACTCG 59.070 52.381 0.00 0.00 38.06 4.18
2403 5902 2.119801 AACTGGCTATTGGCTGACTG 57.880 50.000 13.60 0.00 41.46 3.51
2407 5906 4.516698 CACCTAATAACTGGCTATTGGCTG 59.483 45.833 6.11 6.11 41.46 4.85
2428 5927 5.453567 AACAGGATTAAAGGTTTCTGCAC 57.546 39.130 0.00 0.00 0.00 4.57
2429 5928 6.015772 GGTTAACAGGATTAAAGGTTTCTGCA 60.016 38.462 8.10 0.00 0.00 4.41
2430 5929 6.387465 GGTTAACAGGATTAAAGGTTTCTGC 58.613 40.000 8.10 0.00 0.00 4.26
2433 5940 6.904463 TGGGTTAACAGGATTAAAGGTTTC 57.096 37.500 8.10 0.00 0.00 2.78
2440 5947 8.943594 AAAGTACATTGGGTTAACAGGATTAA 57.056 30.769 8.10 0.00 0.00 1.40
2447 5954 5.942961 TGAGGAAAGTACATTGGGTTAACA 58.057 37.500 8.10 0.00 0.00 2.41
2448 5955 6.002082 ACTGAGGAAAGTACATTGGGTTAAC 58.998 40.000 0.00 0.00 0.00 2.01
2449 5956 6.195600 ACTGAGGAAAGTACATTGGGTTAA 57.804 37.500 0.00 0.00 0.00 2.01
2452 5959 4.506802 GGAACTGAGGAAAGTACATTGGGT 60.507 45.833 0.00 0.00 0.00 4.51
2470 5977 5.304614 ACGCACTATGGTATTATCAGGAACT 59.695 40.000 0.00 0.00 43.88 3.01
2471 5978 5.539048 ACGCACTATGGTATTATCAGGAAC 58.461 41.667 0.00 0.00 0.00 3.62
2526 6033 2.939103 GGTGTGCAATTACTAGCTCCTG 59.061 50.000 0.00 0.00 0.00 3.86
2542 6050 6.801575 ACTAACAATAACCAAACAAGGTGTG 58.198 36.000 0.00 0.00 42.25 3.82
2543 6051 7.412853 AACTAACAATAACCAAACAAGGTGT 57.587 32.000 0.00 0.00 42.25 4.16
2546 6054 7.976734 TCACAAACTAACAATAACCAAACAAGG 59.023 33.333 0.00 0.00 0.00 3.61
2547 6055 8.918961 TCACAAACTAACAATAACCAAACAAG 57.081 30.769 0.00 0.00 0.00 3.16
2548 6056 9.877178 ATTCACAAACTAACAATAACCAAACAA 57.123 25.926 0.00 0.00 0.00 2.83
2550 6058 9.744468 AGATTCACAAACTAACAATAACCAAAC 57.256 29.630 0.00 0.00 0.00 2.93
2592 6100 9.905713 AATCCAAAAGTAGAATCTAGTGCATAA 57.094 29.630 0.00 0.00 0.00 1.90
2690 6198 9.534565 GTAAGAAAATGAGATACTACTGATGCA 57.465 33.333 0.00 0.00 0.00 3.96
2691 6199 9.534565 TGTAAGAAAATGAGATACTACTGATGC 57.465 33.333 0.00 0.00 0.00 3.91
2696 6204 9.319143 GCACATGTAAGAAAATGAGATACTACT 57.681 33.333 0.00 0.00 0.00 2.57
2697 6205 9.098355 TGCACATGTAAGAAAATGAGATACTAC 57.902 33.333 0.00 0.00 0.00 2.73
2698 6206 9.098355 GTGCACATGTAAGAAAATGAGATACTA 57.902 33.333 13.17 0.00 0.00 1.82
2699 6207 7.826252 AGTGCACATGTAAGAAAATGAGATACT 59.174 33.333 21.04 0.00 0.00 2.12
2700 6208 7.907045 CAGTGCACATGTAAGAAAATGAGATAC 59.093 37.037 21.04 0.00 0.00 2.24
2701 6209 7.066163 CCAGTGCACATGTAAGAAAATGAGATA 59.934 37.037 21.04 0.00 0.00 1.98
2702 6210 6.127814 CCAGTGCACATGTAAGAAAATGAGAT 60.128 38.462 21.04 0.00 0.00 2.75
2703 6211 5.181811 CCAGTGCACATGTAAGAAAATGAGA 59.818 40.000 21.04 0.00 0.00 3.27
2704 6212 5.048504 ACCAGTGCACATGTAAGAAAATGAG 60.049 40.000 21.04 1.17 0.00 2.90
2705 6213 4.826733 ACCAGTGCACATGTAAGAAAATGA 59.173 37.500 21.04 0.00 0.00 2.57
2706 6214 5.125100 ACCAGTGCACATGTAAGAAAATG 57.875 39.130 21.04 3.40 0.00 2.32
2707 6215 5.789643 AACCAGTGCACATGTAAGAAAAT 57.210 34.783 21.04 0.00 0.00 1.82
2708 6216 5.590530 AAACCAGTGCACATGTAAGAAAA 57.409 34.783 21.04 0.00 0.00 2.29
2709 6217 6.676950 CATAAACCAGTGCACATGTAAGAAA 58.323 36.000 21.04 1.10 0.00 2.52
2710 6218 5.335583 GCATAAACCAGTGCACATGTAAGAA 60.336 40.000 21.04 2.74 40.94 2.52
2711 6219 4.155826 GCATAAACCAGTGCACATGTAAGA 59.844 41.667 21.04 4.85 40.94 2.10
2712 6220 4.414852 GCATAAACCAGTGCACATGTAAG 58.585 43.478 21.04 1.99 40.94 2.34
2713 6221 3.192422 GGCATAAACCAGTGCACATGTAA 59.808 43.478 21.04 7.76 43.00 2.41
2714 6222 2.752354 GGCATAAACCAGTGCACATGTA 59.248 45.455 21.04 3.84 43.00 2.29
2715 6223 1.545582 GGCATAAACCAGTGCACATGT 59.454 47.619 21.04 12.60 43.00 3.21
2716 6224 1.820519 AGGCATAAACCAGTGCACATG 59.179 47.619 21.04 13.52 43.00 3.21
2717 6225 1.820519 CAGGCATAAACCAGTGCACAT 59.179 47.619 21.04 0.29 43.00 3.21
2718 6226 1.246649 CAGGCATAAACCAGTGCACA 58.753 50.000 21.04 0.00 43.00 4.57
2719 6227 1.247567 ACAGGCATAAACCAGTGCAC 58.752 50.000 9.40 9.40 43.00 4.57
2720 6228 1.993956 AACAGGCATAAACCAGTGCA 58.006 45.000 0.00 0.00 43.00 4.57
2721 6229 2.352715 GGAAACAGGCATAAACCAGTGC 60.353 50.000 0.00 0.00 40.55 4.40
2722 6230 2.231235 GGGAAACAGGCATAAACCAGTG 59.769 50.000 0.00 0.00 28.58 3.66
2723 6231 2.110011 AGGGAAACAGGCATAAACCAGT 59.890 45.455 0.00 0.00 0.00 4.00
2724 6232 2.493278 CAGGGAAACAGGCATAAACCAG 59.507 50.000 0.00 0.00 0.00 4.00
2725 6233 2.109128 TCAGGGAAACAGGCATAAACCA 59.891 45.455 0.00 0.00 0.00 3.67
2726 6234 2.755103 CTCAGGGAAACAGGCATAAACC 59.245 50.000 0.00 0.00 0.00 3.27
2727 6235 3.191371 CACTCAGGGAAACAGGCATAAAC 59.809 47.826 0.00 0.00 0.00 2.01
2728 6236 3.181434 ACACTCAGGGAAACAGGCATAAA 60.181 43.478 0.00 0.00 0.00 1.40
2729 6237 2.375174 ACACTCAGGGAAACAGGCATAA 59.625 45.455 0.00 0.00 0.00 1.90
2730 6238 1.985159 ACACTCAGGGAAACAGGCATA 59.015 47.619 0.00 0.00 0.00 3.14
2731 6239 0.773644 ACACTCAGGGAAACAGGCAT 59.226 50.000 0.00 0.00 0.00 4.40
2732 6240 0.108585 GACACTCAGGGAAACAGGCA 59.891 55.000 0.00 0.00 0.00 4.75
2733 6241 0.398318 AGACACTCAGGGAAACAGGC 59.602 55.000 0.00 0.00 0.00 4.85
2734 6242 1.694150 TGAGACACTCAGGGAAACAGG 59.306 52.381 0.00 0.00 35.39 4.00
2744 6252 5.122869 GCTTTGATAAATGCTGAGACACTCA 59.877 40.000 0.00 0.00 38.25 3.41
2745 6253 5.122869 TGCTTTGATAAATGCTGAGACACTC 59.877 40.000 2.57 0.00 0.00 3.51
2746 6254 5.005740 TGCTTTGATAAATGCTGAGACACT 58.994 37.500 2.57 0.00 0.00 3.55
2747 6255 5.091431 GTGCTTTGATAAATGCTGAGACAC 58.909 41.667 2.57 0.00 0.00 3.67
2748 6256 4.761227 TGTGCTTTGATAAATGCTGAGACA 59.239 37.500 2.57 0.00 0.00 3.41
2749 6257 5.300969 TGTGCTTTGATAAATGCTGAGAC 57.699 39.130 2.57 0.00 0.00 3.36
2750 6258 5.648960 TGATGTGCTTTGATAAATGCTGAGA 59.351 36.000 2.57 0.00 0.00 3.27
2751 6259 5.886992 TGATGTGCTTTGATAAATGCTGAG 58.113 37.500 2.57 0.00 0.00 3.35
2752 6260 5.900865 TGATGTGCTTTGATAAATGCTGA 57.099 34.783 2.57 0.00 0.00 4.26
2753 6261 6.040247 ACATGATGTGCTTTGATAAATGCTG 58.960 36.000 0.00 0.00 0.00 4.41
2754 6262 6.216801 ACATGATGTGCTTTGATAAATGCT 57.783 33.333 0.00 0.00 0.00 3.79
2755 6263 5.461078 GGACATGATGTGCTTTGATAAATGC 59.539 40.000 9.97 0.00 35.71 3.56
2776 6284 5.050295 GCAATGAAGCGTATAGGTTTAGGAC 60.050 44.000 0.00 0.00 41.18 3.85
2783 6291 4.060900 CTGATGCAATGAAGCGTATAGGT 58.939 43.478 0.00 0.00 37.31 3.08
2785 6293 5.015067 CACTGATGCAATGAAGCGTATAG 57.985 43.478 0.00 0.00 37.31 1.31
2787 6295 3.957671 CACTGATGCAATGAAGCGTAT 57.042 42.857 0.00 0.00 37.31 3.06
2801 6332 4.710167 TGCAGCCGCAGCACTGAT 62.710 61.111 15.14 0.00 45.36 2.90
2907 6438 0.455633 CGTCGAGGTAGTTGAACGGG 60.456 60.000 0.00 0.00 0.00 5.28
2922 6453 4.923710 TCATCATCGCCGCCGTCG 62.924 66.667 0.00 0.00 35.54 5.12
2925 6456 2.356194 TCATCATCATCGCCGCCG 60.356 61.111 0.00 0.00 0.00 6.46
2928 6459 2.661566 GCCGTCATCATCATCGCCG 61.662 63.158 0.00 0.00 0.00 6.46
2931 6462 2.661566 GCCGCCGTCATCATCATCG 61.662 63.158 0.00 0.00 0.00 3.84
2932 6463 1.159713 TTGCCGCCGTCATCATCATC 61.160 55.000 0.00 0.00 0.00 2.92
2933 6464 1.153188 TTGCCGCCGTCATCATCAT 60.153 52.632 0.00 0.00 0.00 2.45
2934 6465 2.106074 GTTGCCGCCGTCATCATCA 61.106 57.895 0.00 0.00 0.00 3.07
2937 6468 2.046411 ATGTTGCCGCCGTCATCA 60.046 55.556 0.00 0.00 0.00 3.07
2940 6471 1.573829 GAAAGATGTTGCCGCCGTCA 61.574 55.000 0.00 0.00 0.00 4.35
2958 6489 2.058595 GCCACCCTAGAGAAGCGGA 61.059 63.158 0.00 0.00 0.00 5.54
2961 6492 1.439644 CTCGCCACCCTAGAGAAGC 59.560 63.158 0.00 0.00 34.13 3.86
2975 6506 4.475135 GGAAGGGGTCTGCCTCGC 62.475 72.222 0.00 0.00 41.22 5.03
2976 6507 2.245438 GAAGGAAGGGGTCTGCCTCG 62.245 65.000 0.00 0.00 46.32 4.63
2977 6508 1.604915 GAAGGAAGGGGTCTGCCTC 59.395 63.158 0.00 0.00 46.32 4.70
2979 6510 2.677848 GGAAGGAAGGGGTCTGCC 59.322 66.667 0.00 0.00 39.13 4.85
2982 6513 3.009714 GGCGGAAGGAAGGGGTCT 61.010 66.667 0.00 0.00 0.00 3.85
2983 6514 4.111053 GGGCGGAAGGAAGGGGTC 62.111 72.222 0.00 0.00 0.00 4.46
2984 6515 4.677151 AGGGCGGAAGGAAGGGGT 62.677 66.667 0.00 0.00 0.00 4.95
2985 6516 4.115199 CAGGGCGGAAGGAAGGGG 62.115 72.222 0.00 0.00 0.00 4.79
2986 6517 4.115199 CCAGGGCGGAAGGAAGGG 62.115 72.222 0.00 0.00 36.56 3.95
3027 6558 2.365095 ATACAGCTAACCGGGCGAGC 62.365 60.000 14.70 14.70 36.42 5.03
3029 6560 1.324740 ACATACAGCTAACCGGGCGA 61.325 55.000 6.32 0.00 34.52 5.54
3030 6561 0.461339 AACATACAGCTAACCGGGCG 60.461 55.000 6.32 0.00 34.52 6.13
3031 6562 2.607631 TAACATACAGCTAACCGGGC 57.392 50.000 6.32 0.00 0.00 6.13
3032 6563 5.178809 GCTTATTAACATACAGCTAACCGGG 59.821 44.000 6.32 0.00 0.00 5.73
3033 6564 5.756347 TGCTTATTAACATACAGCTAACCGG 59.244 40.000 0.00 0.00 0.00 5.28
3034 6565 6.700081 TCTGCTTATTAACATACAGCTAACCG 59.300 38.462 0.00 0.00 0.00 4.44
3035 6566 7.711339 AGTCTGCTTATTAACATACAGCTAACC 59.289 37.037 0.00 0.00 0.00 2.85
3036 6567 8.543774 CAGTCTGCTTATTAACATACAGCTAAC 58.456 37.037 0.00 0.00 0.00 2.34
3037 6568 8.258007 ACAGTCTGCTTATTAACATACAGCTAA 58.742 33.333 0.00 0.00 0.00 3.09
3078 6609 0.672401 ATATTTACGGGCGCCCATCG 60.672 55.000 42.78 31.09 42.12 3.84
3081 6612 0.816018 CACATATTTACGGGCGCCCA 60.816 55.000 42.78 26.05 35.37 5.36
3084 6615 1.011333 ACACACATATTTACGGGCGC 58.989 50.000 0.00 0.00 0.00 6.53
3089 6620 5.469373 ACATCTGCACACACATATTTACG 57.531 39.130 0.00 0.00 0.00 3.18
3093 6624 8.504812 TTTACATACATCTGCACACACATATT 57.495 30.769 0.00 0.00 0.00 1.28
3102 6633 8.993121 ACTTATGCTATTTACATACATCTGCAC 58.007 33.333 0.00 0.00 29.89 4.57
3169 6700 9.817809 ACGTAAACTTCTGTATCATGTCATTAT 57.182 29.630 0.00 0.00 0.00 1.28
3170 6701 9.647797 AACGTAAACTTCTGTATCATGTCATTA 57.352 29.630 0.00 0.00 0.00 1.90
3171 6702 8.547967 AACGTAAACTTCTGTATCATGTCATT 57.452 30.769 0.00 0.00 0.00 2.57
3172 6703 8.547967 AAACGTAAACTTCTGTATCATGTCAT 57.452 30.769 0.00 0.00 0.00 3.06
3173 6704 7.870954 AGAAACGTAAACTTCTGTATCATGTCA 59.129 33.333 0.00 0.00 30.67 3.58
3174 6705 8.162880 CAGAAACGTAAACTTCTGTATCATGTC 58.837 37.037 16.22 0.00 42.32 3.06
3175 6706 7.117812 CCAGAAACGTAAACTTCTGTATCATGT 59.882 37.037 20.61 0.00 44.66 3.21
3176 6707 7.330946 TCCAGAAACGTAAACTTCTGTATCATG 59.669 37.037 20.61 8.97 44.66 3.07
3177 6708 7.331193 GTCCAGAAACGTAAACTTCTGTATCAT 59.669 37.037 20.61 0.00 44.66 2.45
3178 6709 6.643770 GTCCAGAAACGTAAACTTCTGTATCA 59.356 38.462 20.61 5.05 44.66 2.15
3179 6710 6.867293 AGTCCAGAAACGTAAACTTCTGTATC 59.133 38.462 20.61 12.87 44.66 2.24
3180 6711 6.756221 AGTCCAGAAACGTAAACTTCTGTAT 58.244 36.000 20.61 8.17 44.66 2.29
3181 6712 6.152932 AGTCCAGAAACGTAAACTTCTGTA 57.847 37.500 20.61 7.66 44.66 2.74
3182 6713 5.019785 AGTCCAGAAACGTAAACTTCTGT 57.980 39.130 20.61 5.57 44.66 3.41
3183 6714 5.050295 GGAAGTCCAGAAACGTAAACTTCTG 60.050 44.000 17.13 17.13 45.37 3.02
3184 6715 5.055144 GGAAGTCCAGAAACGTAAACTTCT 58.945 41.667 16.84 8.72 41.33 2.85
3185 6716 4.212847 GGGAAGTCCAGAAACGTAAACTTC 59.787 45.833 12.42 12.42 41.02 3.01
3186 6717 4.132336 GGGAAGTCCAGAAACGTAAACTT 58.868 43.478 0.00 0.00 37.91 2.66
3187 6718 3.390311 AGGGAAGTCCAGAAACGTAAACT 59.610 43.478 0.00 0.00 38.24 2.66
3188 6719 3.736720 AGGGAAGTCCAGAAACGTAAAC 58.263 45.455 0.00 0.00 38.24 2.01
3189 6720 4.426736 AAGGGAAGTCCAGAAACGTAAA 57.573 40.909 0.00 0.00 38.24 2.01
3190 6721 4.426736 AAAGGGAAGTCCAGAAACGTAA 57.573 40.909 0.00 0.00 38.24 3.18
3191 6722 4.426736 AAAAGGGAAGTCCAGAAACGTA 57.573 40.909 0.00 0.00 38.24 3.57
3192 6723 3.292492 AAAAGGGAAGTCCAGAAACGT 57.708 42.857 0.00 0.00 38.24 3.99
3294 6827 1.208052 TGGTGTGGCTTCTAGATCAGC 59.792 52.381 7.76 7.76 35.07 4.26
3384 6918 4.280677 CCTTCCATTGCTAGTTTTGGACAA 59.719 41.667 8.59 0.00 37.97 3.18
3399 6933 0.257039 CAGCACTAGGCCCTTCCATT 59.743 55.000 0.00 0.00 46.50 3.16
3422 6956 5.482908 AGTCTGTTGATACCTTTGTAGCTG 58.517 41.667 0.00 0.00 34.44 4.24
3475 7009 3.332034 GAAATGCTTGCTGGCTTCAAAT 58.668 40.909 3.49 0.00 0.00 2.32
3534 7068 0.846427 AGAGGAGGGCATGGTTTGGA 60.846 55.000 0.00 0.00 0.00 3.53
3554 7088 4.657436 GAGGGTGACTCGTGATATCTTT 57.343 45.455 3.98 0.00 36.29 2.52
3639 7174 5.105567 TCTTGTTTGTTCCCTACTTGACA 57.894 39.130 0.00 0.00 0.00 3.58
3672 7207 8.837737 AGTGTTATATGCCTAGAGATCCTACTA 58.162 37.037 0.00 0.00 0.00 1.82
3900 7435 6.204301 ACTGTGAAGAGAGTGTGAATCATTTG 59.796 38.462 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.