Multiple sequence alignment - TraesCS7B01G463700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G463700 chr7B 100.000 3466 0 0 1 3466 720539135 720535670 0.000000e+00 6401.0
1 TraesCS7B01G463700 chr7B 86.061 165 15 5 2781 2941 734392650 734392810 1.650000e-38 171.0
2 TraesCS7B01G463700 chr7B 91.549 71 6 0 21 91 720538670 720538600 7.920000e-17 99.0
3 TraesCS7B01G463700 chr7B 91.549 71 6 0 466 536 720539115 720539045 7.920000e-17 99.0
4 TraesCS7B01G463700 chrUn 96.899 1419 38 3 1363 2781 361327633 361326221 0.000000e+00 2372.0
5 TraesCS7B01G463700 chrUn 93.508 878 41 3 496 1361 93252461 93253334 0.000000e+00 1291.0
6 TraesCS7B01G463700 chrUn 94.257 505 26 3 2963 3466 361326229 361325727 0.000000e+00 769.0
7 TraesCS7B01G463700 chrUn 89.222 167 10 5 2779 2941 183017630 183017468 5.870000e-48 202.0
8 TraesCS7B01G463700 chr6D 87.332 1192 133 14 1238 2420 388152808 388151626 0.000000e+00 1349.0
9 TraesCS7B01G463700 chr6D 88.830 188 15 2 2778 2962 18932559 18932743 3.480000e-55 226.0
10 TraesCS7B01G463700 chr6A 87.259 1193 134 13 1238 2421 534798830 534797647 0.000000e+00 1345.0
11 TraesCS7B01G463700 chr6B 85.882 1190 152 11 1238 2419 579888011 579886830 0.000000e+00 1253.0
12 TraesCS7B01G463700 chr2D 86.360 1173 130 15 1256 2413 57259002 57257845 0.000000e+00 1253.0
13 TraesCS7B01G463700 chr2D 82.749 1026 160 10 1360 2375 538272223 538271205 0.000000e+00 898.0
14 TraesCS7B01G463700 chr2D 87.838 222 27 0 2200 2421 57168175 57167954 9.540000e-66 261.0
15 TraesCS7B01G463700 chr2D 89.677 155 9 3 2781 2931 174691250 174691099 1.270000e-44 191.0
16 TraesCS7B01G463700 chr2A 82.422 1024 161 11 1360 2375 680502145 680501133 0.000000e+00 876.0
17 TraesCS7B01G463700 chr2A 86.711 602 74 3 1531 2132 58398881 58398286 0.000000e+00 664.0
18 TraesCS7B01G463700 chr2B 81.880 1032 155 15 1366 2375 641075730 641074709 0.000000e+00 841.0
19 TraesCS7B01G463700 chr2B 82.384 562 86 5 1851 2412 90556540 90555992 8.700000e-131 477.0
20 TraesCS7B01G463700 chr2B 90.323 186 12 2 2780 2962 51800973 51800791 4.470000e-59 239.0
21 TraesCS7B01G463700 chr2B 87.845 181 13 5 2785 2962 547430819 547430993 1.630000e-48 204.0
22 TraesCS7B01G463700 chr7D 91.398 186 9 4 2781 2962 610417460 610417278 7.430000e-62 248.0
23 TraesCS7B01G463700 chr3A 89.529 191 14 2 2775 2962 701862436 701862623 1.610000e-58 237.0
24 TraesCS7B01G463700 chr3B 93.103 145 7 1 2821 2962 816279213 816279069 3.510000e-50 209.0
25 TraesCS7B01G463700 chr3B 77.008 361 69 11 102 457 15860577 15860928 9.820000e-46 195.0
26 TraesCS7B01G463700 chr3B 82.653 196 7 6 2781 2962 6599270 6599088 7.750000e-32 148.0
27 TraesCS7B01G463700 chr4A 84.559 136 4 4 2779 2900 662130133 662130001 6.080000e-23 119.0
28 TraesCS7B01G463700 chr5A 100.000 31 0 0 3436 3466 662405508 662405478 1.340000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G463700 chr7B 720535670 720539135 3465 True 2199.666667 6401 94.366 1 3466 3 chr7B.!!$R1 3465
1 TraesCS7B01G463700 chrUn 361325727 361327633 1906 True 1570.500000 2372 95.578 1363 3466 2 chrUn.!!$R2 2103
2 TraesCS7B01G463700 chrUn 93252461 93253334 873 False 1291.000000 1291 93.508 496 1361 1 chrUn.!!$F1 865
3 TraesCS7B01G463700 chr6D 388151626 388152808 1182 True 1349.000000 1349 87.332 1238 2420 1 chr6D.!!$R1 1182
4 TraesCS7B01G463700 chr6A 534797647 534798830 1183 True 1345.000000 1345 87.259 1238 2421 1 chr6A.!!$R1 1183
5 TraesCS7B01G463700 chr6B 579886830 579888011 1181 True 1253.000000 1253 85.882 1238 2419 1 chr6B.!!$R1 1181
6 TraesCS7B01G463700 chr2D 57257845 57259002 1157 True 1253.000000 1253 86.360 1256 2413 1 chr2D.!!$R2 1157
7 TraesCS7B01G463700 chr2D 538271205 538272223 1018 True 898.000000 898 82.749 1360 2375 1 chr2D.!!$R4 1015
8 TraesCS7B01G463700 chr2A 680501133 680502145 1012 True 876.000000 876 82.422 1360 2375 1 chr2A.!!$R2 1015
9 TraesCS7B01G463700 chr2A 58398286 58398881 595 True 664.000000 664 86.711 1531 2132 1 chr2A.!!$R1 601
10 TraesCS7B01G463700 chr2B 641074709 641075730 1021 True 841.000000 841 81.880 1366 2375 1 chr2B.!!$R3 1009
11 TraesCS7B01G463700 chr2B 90555992 90556540 548 True 477.000000 477 82.384 1851 2412 1 chr2B.!!$R2 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.036952 CGAGATCATGCGGGCCTAAT 60.037 55.0 0.84 0.00 0.00 1.73 F
153 154 0.038343 AACATTTGGATGCCACGTGC 60.038 50.0 10.91 6.53 36.72 5.34 F
535 536 0.104120 CTGGTCCATGCATGCATTGG 59.896 55.0 30.32 29.42 33.90 3.16 F
603 604 0.109532 TTGTTGGTTGATCTCCGGCA 59.890 50.0 0.00 0.00 0.00 5.69 F
2306 2376 0.251341 GGGTGGTGGTGAAGATGCTT 60.251 55.0 0.00 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1079 1092 1.832608 CCGATGACGATGGGGAGGA 60.833 63.158 0.00 0.0 42.66 3.71 R
1080 1093 2.134287 ACCGATGACGATGGGGAGG 61.134 63.158 0.00 0.0 42.66 4.30 R
2335 2405 0.036388 GAGATGCTGGAACGGGTTCA 60.036 55.000 13.08 0.0 41.20 3.18 R
2368 2438 1.112315 GGTCCACATGTTTGCCACCA 61.112 55.000 0.00 0.0 0.00 4.17 R
3422 3493 0.178068 GGAGGCTCCAGATGCGTTAA 59.822 55.000 28.55 0.0 36.28 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.280197 TGCATGCCAAAGCTATAGTCA 57.720 42.857 16.68 0.00 40.80 3.41
21 22 3.824133 TGCATGCCAAAGCTATAGTCAT 58.176 40.909 16.68 0.00 40.80 3.06
22 23 4.971939 TGCATGCCAAAGCTATAGTCATA 58.028 39.130 16.68 0.00 40.80 2.15
23 24 5.375773 TGCATGCCAAAGCTATAGTCATAA 58.624 37.500 16.68 0.00 40.80 1.90
24 25 5.471116 TGCATGCCAAAGCTATAGTCATAAG 59.529 40.000 16.68 0.00 40.80 1.73
25 26 5.471456 GCATGCCAAAGCTATAGTCATAAGT 59.529 40.000 6.36 0.00 40.80 2.24
26 27 6.348050 GCATGCCAAAGCTATAGTCATAAGTC 60.348 42.308 6.36 0.00 40.80 3.01
27 28 5.289595 TGCCAAAGCTATAGTCATAAGTCG 58.710 41.667 0.84 0.00 40.80 4.18
28 29 5.163447 TGCCAAAGCTATAGTCATAAGTCGT 60.163 40.000 0.84 0.00 40.80 4.34
29 30 5.753921 GCCAAAGCTATAGTCATAAGTCGTT 59.246 40.000 0.84 0.00 35.50 3.85
30 31 6.074249 GCCAAAGCTATAGTCATAAGTCGTTC 60.074 42.308 0.84 0.00 35.50 3.95
31 32 7.203910 CCAAAGCTATAGTCATAAGTCGTTCT 58.796 38.462 0.84 0.00 0.00 3.01
32 33 7.380065 CCAAAGCTATAGTCATAAGTCGTTCTC 59.620 40.741 0.84 0.00 0.00 2.87
33 34 7.569639 AAGCTATAGTCATAAGTCGTTCTCA 57.430 36.000 0.84 0.00 0.00 3.27
34 35 7.569639 AGCTATAGTCATAAGTCGTTCTCAA 57.430 36.000 0.84 0.00 0.00 3.02
35 36 7.419204 AGCTATAGTCATAAGTCGTTCTCAAC 58.581 38.462 0.84 0.00 0.00 3.18
36 37 7.067129 AGCTATAGTCATAAGTCGTTCTCAACA 59.933 37.037 0.84 0.00 0.00 3.33
37 38 7.701078 GCTATAGTCATAAGTCGTTCTCAACAA 59.299 37.037 0.84 0.00 0.00 2.83
38 39 9.569167 CTATAGTCATAAGTCGTTCTCAACAAA 57.431 33.333 0.00 0.00 0.00 2.83
39 40 8.827177 ATAGTCATAAGTCGTTCTCAACAAAA 57.173 30.769 0.00 0.00 0.00 2.44
40 41 7.548196 AGTCATAAGTCGTTCTCAACAAAAA 57.452 32.000 0.00 0.00 0.00 1.94
41 42 7.630924 AGTCATAAGTCGTTCTCAACAAAAAG 58.369 34.615 0.00 0.00 0.00 2.27
42 43 7.494625 AGTCATAAGTCGTTCTCAACAAAAAGA 59.505 33.333 0.00 0.00 0.00 2.52
43 44 8.120465 GTCATAAGTCGTTCTCAACAAAAAGAA 58.880 33.333 0.00 0.00 0.00 2.52
44 45 8.335356 TCATAAGTCGTTCTCAACAAAAAGAAG 58.665 33.333 0.00 0.00 32.40 2.85
45 46 4.909894 AGTCGTTCTCAACAAAAAGAAGC 58.090 39.130 0.00 0.00 32.40 3.86
46 47 4.636206 AGTCGTTCTCAACAAAAAGAAGCT 59.364 37.500 0.00 0.00 32.40 3.74
47 48 5.123979 AGTCGTTCTCAACAAAAAGAAGCTT 59.876 36.000 0.00 0.00 32.40 3.74
48 49 5.452623 GTCGTTCTCAACAAAAAGAAGCTTC 59.547 40.000 19.11 19.11 32.40 3.86
49 50 5.123186 TCGTTCTCAACAAAAAGAAGCTTCA 59.877 36.000 27.57 3.27 32.40 3.02
50 51 5.973565 CGTTCTCAACAAAAAGAAGCTTCAT 59.026 36.000 27.57 14.17 32.40 2.57
51 52 7.011950 TCGTTCTCAACAAAAAGAAGCTTCATA 59.988 33.333 27.57 0.00 32.40 2.15
52 53 7.643764 CGTTCTCAACAAAAAGAAGCTTCATAA 59.356 33.333 27.57 1.68 32.40 1.90
53 54 9.468532 GTTCTCAACAAAAAGAAGCTTCATAAT 57.531 29.630 27.57 8.93 32.40 1.28
59 60 9.696917 AACAAAAAGAAGCTTCATAATAAGTGG 57.303 29.630 27.57 8.99 0.00 4.00
60 61 9.077885 ACAAAAAGAAGCTTCATAATAAGTGGA 57.922 29.630 27.57 0.00 0.00 4.02
61 62 9.565213 CAAAAAGAAGCTTCATAATAAGTGGAG 57.435 33.333 27.57 1.36 0.00 3.86
62 63 8.870075 AAAAGAAGCTTCATAATAAGTGGAGT 57.130 30.769 27.57 0.00 0.00 3.85
63 64 8.499403 AAAGAAGCTTCATAATAAGTGGAGTC 57.501 34.615 27.57 0.00 0.00 3.36
64 65 7.187824 AGAAGCTTCATAATAAGTGGAGTCA 57.812 36.000 27.57 0.00 0.00 3.41
65 66 7.624549 AGAAGCTTCATAATAAGTGGAGTCAA 58.375 34.615 27.57 0.00 0.00 3.18
66 67 8.103305 AGAAGCTTCATAATAAGTGGAGTCAAA 58.897 33.333 27.57 0.00 0.00 2.69
67 68 7.856145 AGCTTCATAATAAGTGGAGTCAAAG 57.144 36.000 0.00 0.00 0.00 2.77
68 69 7.398024 AGCTTCATAATAAGTGGAGTCAAAGT 58.602 34.615 0.00 0.00 0.00 2.66
69 70 7.885399 AGCTTCATAATAAGTGGAGTCAAAGTT 59.115 33.333 0.00 0.00 0.00 2.66
70 71 8.515414 GCTTCATAATAAGTGGAGTCAAAGTTT 58.485 33.333 0.00 0.00 0.00 2.66
72 73 9.793259 TTCATAATAAGTGGAGTCAAAGTTTCT 57.207 29.630 0.00 0.00 0.00 2.52
76 77 8.834749 AATAAGTGGAGTCAAAGTTTCTAGTC 57.165 34.615 0.00 0.00 0.00 2.59
77 78 5.216614 AGTGGAGTCAAAGTTTCTAGTCC 57.783 43.478 11.93 11.93 32.93 3.85
78 79 4.654262 AGTGGAGTCAAAGTTTCTAGTCCA 59.346 41.667 15.57 15.57 38.77 4.02
79 80 5.308237 AGTGGAGTCAAAGTTTCTAGTCCAT 59.692 40.000 19.82 10.97 42.04 3.41
80 81 5.409826 GTGGAGTCAAAGTTTCTAGTCCATG 59.590 44.000 19.82 0.00 42.04 3.66
81 82 4.393371 GGAGTCAAAGTTTCTAGTCCATGC 59.607 45.833 13.24 0.00 32.63 4.06
82 83 4.973168 AGTCAAAGTTTCTAGTCCATGCA 58.027 39.130 0.00 0.00 0.00 3.96
83 84 5.564550 AGTCAAAGTTTCTAGTCCATGCAT 58.435 37.500 0.00 0.00 0.00 3.96
84 85 6.711277 AGTCAAAGTTTCTAGTCCATGCATA 58.289 36.000 0.00 0.00 0.00 3.14
85 86 6.595716 AGTCAAAGTTTCTAGTCCATGCATAC 59.404 38.462 0.00 0.00 0.00 2.39
86 87 6.371548 GTCAAAGTTTCTAGTCCATGCATACA 59.628 38.462 0.00 0.00 0.00 2.29
87 88 7.066284 GTCAAAGTTTCTAGTCCATGCATACAT 59.934 37.037 0.00 0.00 36.79 2.29
88 89 7.611467 TCAAAGTTTCTAGTCCATGCATACATT 59.389 33.333 0.00 0.00 32.87 2.71
89 90 6.932356 AGTTTCTAGTCCATGCATACATTG 57.068 37.500 0.00 0.00 32.87 2.82
90 91 5.824624 AGTTTCTAGTCCATGCATACATTGG 59.175 40.000 0.00 0.00 32.87 3.16
91 92 3.743521 TCTAGTCCATGCATACATTGGC 58.256 45.455 0.00 0.00 32.87 4.52
92 93 2.440517 AGTCCATGCATACATTGGCA 57.559 45.000 0.00 0.00 45.23 4.92
93 94 2.737544 AGTCCATGCATACATTGGCAA 58.262 42.857 0.68 0.68 44.20 4.52
94 95 2.428171 AGTCCATGCATACATTGGCAAC 59.572 45.455 0.00 0.00 44.20 4.17
95 96 1.404748 TCCATGCATACATTGGCAACG 59.595 47.619 0.00 0.00 44.20 4.10
96 97 1.404748 CCATGCATACATTGGCAACGA 59.595 47.619 0.00 0.00 44.20 3.85
97 98 2.034939 CCATGCATACATTGGCAACGAT 59.965 45.455 0.00 0.00 44.20 3.73
98 99 3.302555 CATGCATACATTGGCAACGATC 58.697 45.455 0.00 0.00 44.20 3.69
99 100 1.330213 TGCATACATTGGCAACGATCG 59.670 47.619 14.88 14.88 39.28 3.69
100 101 1.597195 GCATACATTGGCAACGATCGA 59.403 47.619 24.34 0.00 39.28 3.59
101 102 2.348872 GCATACATTGGCAACGATCGAG 60.349 50.000 24.34 14.75 39.28 4.04
102 103 2.665649 TACATTGGCAACGATCGAGT 57.334 45.000 24.34 6.14 39.28 4.18
103 104 1.808411 ACATTGGCAACGATCGAGTT 58.192 45.000 24.34 3.17 39.28 3.01
104 105 2.151202 ACATTGGCAACGATCGAGTTT 58.849 42.857 24.34 2.31 39.28 2.66
105 106 2.095768 ACATTGGCAACGATCGAGTTTG 60.096 45.455 24.34 16.77 39.28 2.93
106 107 0.237235 TTGGCAACGATCGAGTTTGC 59.763 50.000 25.40 25.40 42.51 3.68
107 108 1.134694 GGCAACGATCGAGTTTGCC 59.865 57.895 32.23 32.23 39.30 4.52
108 109 1.225745 GCAACGATCGAGTTTGCCG 60.226 57.895 24.34 1.60 30.96 5.69
109 110 1.623081 GCAACGATCGAGTTTGCCGA 61.623 55.000 24.34 0.00 40.53 5.54
110 111 0.366871 CAACGATCGAGTTTGCCGAG 59.633 55.000 24.34 0.00 39.55 4.63
111 112 0.242825 AACGATCGAGTTTGCCGAGA 59.757 50.000 24.34 0.00 39.55 4.04
112 113 0.456221 ACGATCGAGTTTGCCGAGAT 59.544 50.000 24.34 0.00 39.55 2.75
113 114 1.124462 CGATCGAGTTTGCCGAGATC 58.876 55.000 10.26 0.00 39.55 2.75
114 115 1.533965 CGATCGAGTTTGCCGAGATCA 60.534 52.381 10.26 0.00 39.55 2.92
115 116 2.748605 GATCGAGTTTGCCGAGATCAT 58.251 47.619 0.00 0.00 39.55 2.45
116 117 1.926561 TCGAGTTTGCCGAGATCATG 58.073 50.000 0.00 0.00 0.00 3.07
117 118 0.302890 CGAGTTTGCCGAGATCATGC 59.697 55.000 0.00 0.00 0.00 4.06
118 119 0.302890 GAGTTTGCCGAGATCATGCG 59.697 55.000 0.00 0.00 0.00 4.73
123 124 3.933722 CCGAGATCATGCGGGCCT 61.934 66.667 0.84 0.00 43.67 5.19
124 125 2.574018 CCGAGATCATGCGGGCCTA 61.574 63.158 0.84 0.00 43.67 3.93
125 126 1.367471 CGAGATCATGCGGGCCTAA 59.633 57.895 0.84 0.00 0.00 2.69
126 127 0.036952 CGAGATCATGCGGGCCTAAT 60.037 55.000 0.84 0.00 0.00 1.73
127 128 1.731720 GAGATCATGCGGGCCTAATC 58.268 55.000 0.84 0.00 0.00 1.75
128 129 1.277557 GAGATCATGCGGGCCTAATCT 59.722 52.381 0.84 2.38 0.00 2.40
129 130 1.277557 AGATCATGCGGGCCTAATCTC 59.722 52.381 0.84 0.00 0.00 2.75
130 131 0.036952 ATCATGCGGGCCTAATCTCG 60.037 55.000 0.84 0.00 0.00 4.04
131 132 1.669115 CATGCGGGCCTAATCTCGG 60.669 63.158 0.84 0.00 0.00 4.63
132 133 3.537206 ATGCGGGCCTAATCTCGGC 62.537 63.158 0.84 0.00 46.83 5.54
140 141 3.782889 GCCTAATCTCGGCAAACATTT 57.217 42.857 0.00 0.00 46.77 2.32
141 142 3.438360 GCCTAATCTCGGCAAACATTTG 58.562 45.455 0.00 0.00 46.77 2.32
142 143 3.734902 GCCTAATCTCGGCAAACATTTGG 60.735 47.826 6.49 0.00 46.77 3.28
143 144 3.694072 CCTAATCTCGGCAAACATTTGGA 59.306 43.478 6.49 0.00 38.57 3.53
144 145 4.339247 CCTAATCTCGGCAAACATTTGGAT 59.661 41.667 6.49 0.00 38.57 3.41
145 146 3.788333 ATCTCGGCAAACATTTGGATG 57.212 42.857 6.49 0.00 38.57 3.51
146 147 1.202114 TCTCGGCAAACATTTGGATGC 59.798 47.619 6.49 0.00 38.57 3.91
150 151 1.070038 GCAAACATTTGGATGCCACG 58.930 50.000 6.49 0.00 38.57 4.94
151 152 1.605202 GCAAACATTTGGATGCCACGT 60.605 47.619 6.49 0.00 38.57 4.49
152 153 2.060284 CAAACATTTGGATGCCACGTG 58.940 47.619 9.08 9.08 36.72 4.49
153 154 0.038343 AACATTTGGATGCCACGTGC 60.038 50.000 10.91 6.53 36.72 5.34
154 155 1.153784 CATTTGGATGCCACGTGCC 60.154 57.895 10.91 6.50 40.16 5.01
155 156 1.606025 ATTTGGATGCCACGTGCCA 60.606 52.632 10.91 5.63 40.16 4.92
156 157 0.971959 ATTTGGATGCCACGTGCCAT 60.972 50.000 12.45 12.45 40.16 4.40
157 158 1.875420 TTTGGATGCCACGTGCCATG 61.875 55.000 17.80 0.35 40.16 3.66
158 159 4.197498 GGATGCCACGTGCCATGC 62.197 66.667 17.80 16.32 40.16 4.06
159 160 3.136123 GATGCCACGTGCCATGCT 61.136 61.111 17.80 0.00 40.16 3.79
160 161 3.117175 GATGCCACGTGCCATGCTC 62.117 63.158 17.80 0.00 40.16 4.26
163 164 2.584064 CCACGTGCCATGCTCCTA 59.416 61.111 10.91 0.00 0.00 2.94
164 165 1.522355 CCACGTGCCATGCTCCTAG 60.522 63.158 10.91 0.00 0.00 3.02
165 166 1.522355 CACGTGCCATGCTCCTAGG 60.522 63.158 0.82 0.82 0.00 3.02
166 167 1.990060 ACGTGCCATGCTCCTAGGT 60.990 57.895 9.08 0.00 0.00 3.08
167 168 1.221840 CGTGCCATGCTCCTAGGTT 59.778 57.895 9.08 0.00 0.00 3.50
168 169 0.392998 CGTGCCATGCTCCTAGGTTT 60.393 55.000 9.08 0.00 0.00 3.27
169 170 1.383523 GTGCCATGCTCCTAGGTTTC 58.616 55.000 9.08 0.00 0.00 2.78
170 171 0.255890 TGCCATGCTCCTAGGTTTCC 59.744 55.000 9.08 0.00 0.00 3.13
171 172 0.255890 GCCATGCTCCTAGGTTTCCA 59.744 55.000 9.08 2.43 0.00 3.53
172 173 1.340991 GCCATGCTCCTAGGTTTCCAA 60.341 52.381 9.08 0.00 0.00 3.53
173 174 2.648059 CCATGCTCCTAGGTTTCCAAG 58.352 52.381 9.08 0.00 0.00 3.61
174 175 2.025887 CCATGCTCCTAGGTTTCCAAGT 60.026 50.000 9.08 0.00 0.00 3.16
175 176 3.562176 CCATGCTCCTAGGTTTCCAAGTT 60.562 47.826 9.08 0.00 0.00 2.66
176 177 3.418684 TGCTCCTAGGTTTCCAAGTTC 57.581 47.619 9.08 0.00 0.00 3.01
177 178 2.289444 TGCTCCTAGGTTTCCAAGTTCG 60.289 50.000 9.08 0.00 0.00 3.95
178 179 2.289506 GCTCCTAGGTTTCCAAGTTCGT 60.290 50.000 9.08 0.00 0.00 3.85
179 180 3.586892 CTCCTAGGTTTCCAAGTTCGTC 58.413 50.000 9.08 0.00 0.00 4.20
180 181 2.029649 TCCTAGGTTTCCAAGTTCGTCG 60.030 50.000 9.08 0.00 0.00 5.12
181 182 2.029649 CCTAGGTTTCCAAGTTCGTCGA 60.030 50.000 0.00 0.00 0.00 4.20
182 183 2.150397 AGGTTTCCAAGTTCGTCGAG 57.850 50.000 0.00 0.00 0.00 4.04
183 184 1.411612 AGGTTTCCAAGTTCGTCGAGT 59.588 47.619 0.00 0.00 0.00 4.18
184 185 1.791204 GGTTTCCAAGTTCGTCGAGTC 59.209 52.381 0.00 0.00 0.00 3.36
185 186 1.791204 GTTTCCAAGTTCGTCGAGTCC 59.209 52.381 0.00 0.00 0.00 3.85
186 187 0.316204 TTCCAAGTTCGTCGAGTCCC 59.684 55.000 0.00 0.00 0.00 4.46
187 188 1.080025 CCAAGTTCGTCGAGTCCCC 60.080 63.158 0.00 0.00 0.00 4.81
188 189 1.443872 CAAGTTCGTCGAGTCCCCG 60.444 63.158 0.00 0.00 0.00 5.73
189 190 3.278592 AAGTTCGTCGAGTCCCCGC 62.279 63.158 0.00 0.00 0.00 6.13
190 191 3.745803 GTTCGTCGAGTCCCCGCT 61.746 66.667 0.00 0.00 0.00 5.52
191 192 3.437795 TTCGTCGAGTCCCCGCTC 61.438 66.667 0.00 0.00 0.00 5.03
192 193 3.914579 TTCGTCGAGTCCCCGCTCT 62.915 63.158 0.00 0.00 33.55 4.09
193 194 3.441290 CGTCGAGTCCCCGCTCTT 61.441 66.667 0.00 0.00 33.55 2.85
194 195 2.182030 GTCGAGTCCCCGCTCTTG 59.818 66.667 0.00 0.00 33.55 3.02
195 196 3.068691 TCGAGTCCCCGCTCTTGG 61.069 66.667 0.00 0.00 33.55 3.61
196 197 3.382832 CGAGTCCCCGCTCTTGGT 61.383 66.667 0.00 0.00 33.55 3.67
197 198 2.943978 CGAGTCCCCGCTCTTGGTT 61.944 63.158 0.00 0.00 33.55 3.67
198 199 1.079057 GAGTCCCCGCTCTTGGTTC 60.079 63.158 0.00 0.00 32.99 3.62
199 200 1.536662 AGTCCCCGCTCTTGGTTCT 60.537 57.895 0.00 0.00 0.00 3.01
200 201 1.079057 GTCCCCGCTCTTGGTTCTC 60.079 63.158 0.00 0.00 0.00 2.87
201 202 1.535444 TCCCCGCTCTTGGTTCTCA 60.535 57.895 0.00 0.00 0.00 3.27
202 203 1.078848 CCCCGCTCTTGGTTCTCAG 60.079 63.158 0.00 0.00 0.00 3.35
203 204 1.743252 CCCGCTCTTGGTTCTCAGC 60.743 63.158 0.00 0.00 0.00 4.26
204 205 1.004560 CCGCTCTTGGTTCTCAGCA 60.005 57.895 0.00 0.00 0.00 4.41
205 206 0.603707 CCGCTCTTGGTTCTCAGCAA 60.604 55.000 0.00 0.00 38.09 3.91
206 207 1.229428 CGCTCTTGGTTCTCAGCAAA 58.771 50.000 0.00 0.00 39.90 3.68
207 208 1.808945 CGCTCTTGGTTCTCAGCAAAT 59.191 47.619 0.00 0.00 39.90 2.32
208 209 2.227388 CGCTCTTGGTTCTCAGCAAATT 59.773 45.455 0.00 0.00 39.90 1.82
209 210 3.572584 GCTCTTGGTTCTCAGCAAATTG 58.427 45.455 0.00 0.00 39.90 2.32
210 211 3.572584 CTCTTGGTTCTCAGCAAATTGC 58.427 45.455 10.41 10.41 45.46 3.56
220 221 2.524300 GCAAATTGCTGTGCCACTG 58.476 52.632 11.19 0.00 40.96 3.66
221 222 0.947180 GCAAATTGCTGTGCCACTGG 60.947 55.000 11.19 0.00 40.96 4.00
232 233 2.821366 CCACTGGCAGCCATCGTC 60.821 66.667 16.64 0.00 30.82 4.20
233 234 2.267006 CACTGGCAGCCATCGTCT 59.733 61.111 16.64 0.00 30.82 4.18
234 235 1.812922 CACTGGCAGCCATCGTCTC 60.813 63.158 16.64 0.00 30.82 3.36
235 236 1.986757 ACTGGCAGCCATCGTCTCT 60.987 57.895 16.64 0.00 30.82 3.10
236 237 1.521010 CTGGCAGCCATCGTCTCTG 60.521 63.158 16.64 0.00 30.82 3.35
237 238 2.236223 CTGGCAGCCATCGTCTCTGT 62.236 60.000 16.64 0.00 30.82 3.41
238 239 1.520342 GGCAGCCATCGTCTCTGTC 60.520 63.158 6.55 0.00 0.00 3.51
239 240 1.515020 GCAGCCATCGTCTCTGTCT 59.485 57.895 0.00 0.00 0.00 3.41
240 241 0.805322 GCAGCCATCGTCTCTGTCTG 60.805 60.000 0.00 0.00 0.00 3.51
241 242 0.805322 CAGCCATCGTCTCTGTCTGC 60.805 60.000 0.00 0.00 0.00 4.26
242 243 1.520342 GCCATCGTCTCTGTCTGCC 60.520 63.158 0.00 0.00 0.00 4.85
243 244 1.142748 CCATCGTCTCTGTCTGCCC 59.857 63.158 0.00 0.00 0.00 5.36
244 245 1.226802 CATCGTCTCTGTCTGCCCG 60.227 63.158 0.00 0.00 0.00 6.13
245 246 1.679305 ATCGTCTCTGTCTGCCCGT 60.679 57.895 0.00 0.00 0.00 5.28
246 247 1.658686 ATCGTCTCTGTCTGCCCGTC 61.659 60.000 0.00 0.00 0.00 4.79
247 248 2.626780 CGTCTCTGTCTGCCCGTCA 61.627 63.158 0.00 0.00 0.00 4.35
248 249 1.666011 GTCTCTGTCTGCCCGTCAA 59.334 57.895 0.00 0.00 0.00 3.18
249 250 0.389166 GTCTCTGTCTGCCCGTCAAG 60.389 60.000 0.00 0.00 0.00 3.02
250 251 0.827925 TCTCTGTCTGCCCGTCAAGT 60.828 55.000 0.00 0.00 0.00 3.16
251 252 0.389166 CTCTGTCTGCCCGTCAAGTC 60.389 60.000 0.00 0.00 0.00 3.01
252 253 1.734477 CTGTCTGCCCGTCAAGTCG 60.734 63.158 0.00 0.00 0.00 4.18
253 254 3.112709 GTCTGCCCGTCAAGTCGC 61.113 66.667 0.00 0.00 0.00 5.19
254 255 3.303135 TCTGCCCGTCAAGTCGCT 61.303 61.111 0.00 0.00 0.00 4.93
255 256 2.357517 CTGCCCGTCAAGTCGCTT 60.358 61.111 0.00 0.00 0.00 4.68
256 257 1.961277 CTGCCCGTCAAGTCGCTTT 60.961 57.895 0.00 0.00 0.00 3.51
257 258 1.507141 CTGCCCGTCAAGTCGCTTTT 61.507 55.000 0.00 0.00 0.00 2.27
258 259 1.098712 TGCCCGTCAAGTCGCTTTTT 61.099 50.000 0.00 0.00 0.00 1.94
278 279 4.492604 TTTTTGCGGAGTCCCAGG 57.507 55.556 2.80 0.00 0.00 4.45
279 280 1.534697 TTTTTGCGGAGTCCCAGGT 59.465 52.632 2.80 0.00 0.00 4.00
280 281 0.106419 TTTTTGCGGAGTCCCAGGTT 60.106 50.000 2.80 0.00 0.00 3.50
281 282 0.106419 TTTTGCGGAGTCCCAGGTTT 60.106 50.000 2.80 0.00 0.00 3.27
282 283 0.766131 TTTGCGGAGTCCCAGGTTTA 59.234 50.000 2.80 0.00 0.00 2.01
283 284 0.323629 TTGCGGAGTCCCAGGTTTAG 59.676 55.000 2.80 0.00 0.00 1.85
284 285 0.834687 TGCGGAGTCCCAGGTTTAGT 60.835 55.000 2.80 0.00 0.00 2.24
285 286 0.391263 GCGGAGTCCCAGGTTTAGTG 60.391 60.000 2.80 0.00 0.00 2.74
286 287 0.391263 CGGAGTCCCAGGTTTAGTGC 60.391 60.000 2.80 0.00 0.00 4.40
287 288 0.984995 GGAGTCCCAGGTTTAGTGCT 59.015 55.000 0.00 0.00 0.00 4.40
288 289 1.066071 GGAGTCCCAGGTTTAGTGCTC 60.066 57.143 0.00 0.00 0.00 4.26
289 290 0.608640 AGTCCCAGGTTTAGTGCTCG 59.391 55.000 0.00 0.00 0.00 5.03
290 291 0.391263 GTCCCAGGTTTAGTGCTCGG 60.391 60.000 0.00 0.00 0.00 4.63
291 292 1.745489 CCCAGGTTTAGTGCTCGGC 60.745 63.158 0.00 0.00 0.00 5.54
292 293 1.003839 CCAGGTTTAGTGCTCGGCA 60.004 57.895 0.00 0.00 35.60 5.69
293 294 0.605319 CCAGGTTTAGTGCTCGGCAA 60.605 55.000 0.00 0.00 41.47 4.52
294 295 1.234821 CAGGTTTAGTGCTCGGCAAA 58.765 50.000 0.00 0.00 41.47 3.68
295 296 1.606668 CAGGTTTAGTGCTCGGCAAAA 59.393 47.619 0.00 0.00 41.47 2.44
296 297 2.034053 CAGGTTTAGTGCTCGGCAAAAA 59.966 45.455 0.00 2.77 41.47 1.94
297 298 2.034179 AGGTTTAGTGCTCGGCAAAAAC 59.966 45.455 18.97 18.97 41.47 2.43
298 299 2.041244 GTTTAGTGCTCGGCAAAAACG 58.959 47.619 15.53 0.00 41.47 3.60
299 300 1.301423 TTAGTGCTCGGCAAAAACGT 58.699 45.000 0.00 0.00 41.47 3.99
300 301 1.301423 TAGTGCTCGGCAAAAACGTT 58.699 45.000 0.00 0.00 41.47 3.99
301 302 0.248458 AGTGCTCGGCAAAAACGTTG 60.248 50.000 0.00 0.00 41.47 4.10
302 303 0.524604 GTGCTCGGCAAAAACGTTGT 60.525 50.000 0.00 0.00 41.47 3.32
303 304 0.248296 TGCTCGGCAAAAACGTTGTC 60.248 50.000 0.00 0.00 34.76 3.18
307 308 3.909957 GGCAAAAACGTTGTCGAGT 57.090 47.368 0.00 0.00 40.62 4.18
308 309 1.738432 GGCAAAAACGTTGTCGAGTC 58.262 50.000 0.00 0.00 40.62 3.36
309 310 1.596220 GGCAAAAACGTTGTCGAGTCC 60.596 52.381 0.00 0.00 40.62 3.85
310 311 1.596220 GCAAAAACGTTGTCGAGTCCC 60.596 52.381 0.00 0.00 40.62 4.46
311 312 1.003223 CAAAAACGTTGTCGAGTCCCC 60.003 52.381 0.00 0.00 40.62 4.81
312 313 0.877213 AAAACGTTGTCGAGTCCCCG 60.877 55.000 0.00 0.00 40.62 5.73
313 314 1.737355 AAACGTTGTCGAGTCCCCGA 61.737 55.000 0.00 0.00 40.62 5.14
314 315 1.530013 AACGTTGTCGAGTCCCCGAT 61.530 55.000 0.00 0.00 40.91 4.18
315 316 1.516386 CGTTGTCGAGTCCCCGATG 60.516 63.158 0.00 0.00 40.91 3.84
316 317 1.888018 GTTGTCGAGTCCCCGATGA 59.112 57.895 0.00 0.00 40.91 2.92
317 318 0.245539 GTTGTCGAGTCCCCGATGAA 59.754 55.000 0.00 0.00 40.91 2.57
318 319 0.245539 TTGTCGAGTCCCCGATGAAC 59.754 55.000 0.00 0.00 40.91 3.18
319 320 1.226603 GTCGAGTCCCCGATGAACG 60.227 63.158 0.00 0.00 40.91 3.95
328 329 2.480555 CGATGAACGGCACTTGGC 59.519 61.111 0.00 0.00 43.74 4.52
334 335 0.948678 GAACGGCACTTGGCAAAGTA 59.051 50.000 6.06 0.00 45.07 2.24
335 336 0.951558 AACGGCACTTGGCAAAGTAG 59.048 50.000 6.06 4.05 45.07 2.57
336 337 0.179029 ACGGCACTTGGCAAAGTAGT 60.179 50.000 6.06 4.70 45.07 2.73
337 338 0.517316 CGGCACTTGGCAAAGTAGTC 59.483 55.000 6.06 2.19 45.07 2.59
338 339 1.878102 CGGCACTTGGCAAAGTAGTCT 60.878 52.381 6.06 0.00 45.07 3.24
339 340 2.230660 GGCACTTGGCAAAGTAGTCTT 58.769 47.619 6.06 0.00 45.07 3.01
340 341 2.623416 GGCACTTGGCAAAGTAGTCTTT 59.377 45.455 6.06 0.00 45.07 2.52
349 350 3.329929 AAAGTAGTCTTTGCCGGTAGG 57.670 47.619 1.90 0.00 41.62 3.18
350 351 1.934410 AGTAGTCTTTGCCGGTAGGT 58.066 50.000 1.90 0.00 40.50 3.08
351 352 2.254508 AGTAGTCTTTGCCGGTAGGTT 58.745 47.619 1.90 0.00 40.50 3.50
352 353 2.636403 AGTAGTCTTTGCCGGTAGGTTT 59.364 45.455 1.90 0.00 40.50 3.27
353 354 1.892209 AGTCTTTGCCGGTAGGTTTG 58.108 50.000 1.90 0.00 40.50 2.93
354 355 1.142262 AGTCTTTGCCGGTAGGTTTGT 59.858 47.619 1.90 0.00 40.50 2.83
355 356 1.265905 GTCTTTGCCGGTAGGTTTGTG 59.734 52.381 1.90 0.00 40.50 3.33
356 357 0.596082 CTTTGCCGGTAGGTTTGTGG 59.404 55.000 1.90 0.00 40.50 4.17
357 358 1.457009 TTTGCCGGTAGGTTTGTGGC 61.457 55.000 1.90 0.00 45.91 5.01
358 359 3.060000 GCCGGTAGGTTTGTGGCC 61.060 66.667 1.90 0.00 39.83 5.36
359 360 2.432563 CCGGTAGGTTTGTGGCCA 59.567 61.111 0.00 0.00 0.00 5.36
360 361 1.674322 CCGGTAGGTTTGTGGCCAG 60.674 63.158 5.11 0.00 0.00 4.85
361 362 1.373435 CGGTAGGTTTGTGGCCAGA 59.627 57.895 5.11 0.00 0.00 3.86
362 363 0.673644 CGGTAGGTTTGTGGCCAGAG 60.674 60.000 5.11 0.00 0.00 3.35
363 364 0.400594 GGTAGGTTTGTGGCCAGAGT 59.599 55.000 5.11 0.00 0.00 3.24
364 365 1.626825 GGTAGGTTTGTGGCCAGAGTA 59.373 52.381 5.11 0.00 0.00 2.59
365 366 2.614734 GGTAGGTTTGTGGCCAGAGTAC 60.615 54.545 5.11 7.22 0.00 2.73
366 367 0.400594 AGGTTTGTGGCCAGAGTACC 59.599 55.000 21.82 21.82 0.00 3.34
367 368 0.608308 GGTTTGTGGCCAGAGTACCC 60.608 60.000 19.80 8.65 0.00 3.69
368 369 0.400594 GTTTGTGGCCAGAGTACCCT 59.599 55.000 5.11 0.00 0.00 4.34
369 370 1.626825 GTTTGTGGCCAGAGTACCCTA 59.373 52.381 5.11 0.00 0.00 3.53
370 371 1.568504 TTGTGGCCAGAGTACCCTAG 58.431 55.000 5.11 0.00 0.00 3.02
371 372 0.325296 TGTGGCCAGAGTACCCTAGG 60.325 60.000 5.11 0.06 0.00 3.02
372 373 1.382695 TGGCCAGAGTACCCTAGGC 60.383 63.158 0.00 8.64 39.87 3.93
373 374 3.552219 GCCAGAGTACCCTAGGCC 58.448 66.667 2.05 0.00 36.46 5.19
374 375 2.499827 GCCAGAGTACCCTAGGCCG 61.500 68.421 2.05 0.00 36.46 6.13
375 376 1.229359 CCAGAGTACCCTAGGCCGA 59.771 63.158 2.05 0.00 0.00 5.54
376 377 0.824182 CCAGAGTACCCTAGGCCGAG 60.824 65.000 5.78 5.78 0.00 4.63
377 378 0.183014 CAGAGTACCCTAGGCCGAGA 59.817 60.000 15.38 0.00 0.00 4.04
378 379 0.924823 AGAGTACCCTAGGCCGAGAA 59.075 55.000 15.38 0.00 0.00 2.87
379 380 1.031235 GAGTACCCTAGGCCGAGAAC 58.969 60.000 15.38 9.36 0.00 3.01
380 381 0.630134 AGTACCCTAGGCCGAGAACT 59.370 55.000 15.38 11.43 0.00 3.01
381 382 1.849039 AGTACCCTAGGCCGAGAACTA 59.151 52.381 15.38 0.00 0.00 2.24
382 383 1.952990 GTACCCTAGGCCGAGAACTAC 59.047 57.143 15.38 6.62 0.00 2.73
383 384 0.333993 ACCCTAGGCCGAGAACTACA 59.666 55.000 15.38 0.00 0.00 2.74
384 385 0.745468 CCCTAGGCCGAGAACTACAC 59.255 60.000 15.38 0.00 0.00 2.90
385 386 1.685491 CCCTAGGCCGAGAACTACACT 60.685 57.143 15.38 0.00 0.00 3.55
386 387 1.677052 CCTAGGCCGAGAACTACACTC 59.323 57.143 15.38 0.00 0.00 3.51
394 395 3.299340 GAGAACTACACTCGGCAAAGA 57.701 47.619 0.00 0.00 0.00 2.52
395 396 3.650139 GAGAACTACACTCGGCAAAGAA 58.350 45.455 0.00 0.00 0.00 2.52
396 397 4.246458 GAGAACTACACTCGGCAAAGAAT 58.754 43.478 0.00 0.00 0.00 2.40
397 398 4.642429 AGAACTACACTCGGCAAAGAATT 58.358 39.130 0.00 0.00 0.00 2.17
398 399 5.063880 AGAACTACACTCGGCAAAGAATTT 58.936 37.500 0.00 0.00 40.26 1.82
411 412 4.647424 AAAGAATTTGCCGAGTGTGAAA 57.353 36.364 0.00 0.00 36.60 2.69
412 413 3.626028 AGAATTTGCCGAGTGTGAAAC 57.374 42.857 0.00 0.00 37.35 2.78
413 414 4.142271 AAAGAATTTGCCGAGTGTGAAACA 60.142 37.500 0.00 0.00 40.99 2.83
414 415 5.960538 AAAGAATTTGCCGAGTGTGAAACAG 60.961 40.000 0.00 0.00 43.47 3.16
423 424 1.646540 TGTGAAACAGCTTTCGCCG 59.353 52.632 8.78 0.00 45.67 6.46
424 425 0.812014 TGTGAAACAGCTTTCGCCGA 60.812 50.000 8.78 0.00 45.67 5.54
425 426 0.110644 GTGAAACAGCTTTCGCCGAG 60.111 55.000 0.97 0.00 39.90 4.63
426 427 0.531974 TGAAACAGCTTTCGCCGAGT 60.532 50.000 0.00 0.00 39.01 4.18
427 428 0.586802 GAAACAGCTTTCGCCGAGTT 59.413 50.000 0.00 0.00 36.60 3.01
428 429 1.002792 GAAACAGCTTTCGCCGAGTTT 60.003 47.619 1.66 1.66 38.20 2.66
429 430 1.021968 AACAGCTTTCGCCGAGTTTT 58.978 45.000 0.00 0.00 36.60 2.43
430 431 1.021968 ACAGCTTTCGCCGAGTTTTT 58.978 45.000 0.00 0.00 36.60 1.94
431 432 1.002792 ACAGCTTTCGCCGAGTTTTTC 60.003 47.619 0.00 0.00 36.60 2.29
432 433 1.264288 CAGCTTTCGCCGAGTTTTTCT 59.736 47.619 0.00 0.00 36.60 2.52
433 434 1.264288 AGCTTTCGCCGAGTTTTTCTG 59.736 47.619 0.00 0.00 36.60 3.02
434 435 1.663161 GCTTTCGCCGAGTTTTTCTGG 60.663 52.381 0.00 0.00 0.00 3.86
435 436 0.309612 TTTCGCCGAGTTTTTCTGGC 59.690 50.000 0.00 0.00 40.09 4.85
436 437 0.816018 TTCGCCGAGTTTTTCTGGCA 60.816 50.000 2.76 0.00 42.11 4.92
437 438 1.082104 CGCCGAGTTTTTCTGGCAC 60.082 57.895 2.76 0.00 42.11 5.01
438 439 1.507141 CGCCGAGTTTTTCTGGCACT 61.507 55.000 2.76 0.00 42.11 4.40
439 440 0.238553 GCCGAGTTTTTCTGGCACTC 59.761 55.000 0.00 0.00 41.82 3.51
440 441 1.593196 CCGAGTTTTTCTGGCACTCA 58.407 50.000 0.00 0.00 37.40 3.41
441 442 1.532868 CCGAGTTTTTCTGGCACTCAG 59.467 52.381 0.00 0.00 44.68 3.35
442 443 1.532868 CGAGTTTTTCTGGCACTCAGG 59.467 52.381 0.00 0.00 43.53 3.86
443 444 2.806745 CGAGTTTTTCTGGCACTCAGGA 60.807 50.000 0.00 0.00 43.53 3.86
444 445 3.214328 GAGTTTTTCTGGCACTCAGGAA 58.786 45.455 0.00 0.00 43.53 3.36
445 446 3.631250 AGTTTTTCTGGCACTCAGGAAA 58.369 40.909 0.00 0.00 46.31 3.13
447 448 3.297134 TTTTCTGGCACTCAGGAAACT 57.703 42.857 0.00 0.00 43.93 2.66
448 449 2.550830 TTCTGGCACTCAGGAAACTC 57.449 50.000 0.00 0.00 43.53 3.01
449 450 1.722034 TCTGGCACTCAGGAAACTCT 58.278 50.000 0.00 0.00 43.53 3.24
450 451 1.345741 TCTGGCACTCAGGAAACTCTG 59.654 52.381 0.00 0.00 43.53 3.35
451 452 1.345741 CTGGCACTCAGGAAACTCTGA 59.654 52.381 0.00 0.00 40.21 3.27
452 453 1.768275 TGGCACTCAGGAAACTCTGAA 59.232 47.619 0.00 0.00 42.46 3.02
453 454 2.172505 TGGCACTCAGGAAACTCTGAAA 59.827 45.455 0.00 0.00 42.46 2.69
454 455 3.181440 TGGCACTCAGGAAACTCTGAAAT 60.181 43.478 0.00 0.00 42.46 2.17
455 456 3.823304 GGCACTCAGGAAACTCTGAAATT 59.177 43.478 0.00 0.00 42.46 1.82
456 457 4.083057 GGCACTCAGGAAACTCTGAAATTC 60.083 45.833 0.00 0.00 42.46 2.17
457 458 4.759183 GCACTCAGGAAACTCTGAAATTCT 59.241 41.667 0.00 0.00 42.46 2.40
458 459 5.934625 GCACTCAGGAAACTCTGAAATTCTA 59.065 40.000 0.00 0.00 42.46 2.10
459 460 6.128418 GCACTCAGGAAACTCTGAAATTCTAC 60.128 42.308 0.00 0.00 42.46 2.59
460 461 7.158021 CACTCAGGAAACTCTGAAATTCTACT 58.842 38.462 0.00 0.00 42.46 2.57
461 462 8.307483 CACTCAGGAAACTCTGAAATTCTACTA 58.693 37.037 0.00 0.00 42.46 1.82
462 463 8.871125 ACTCAGGAAACTCTGAAATTCTACTAA 58.129 33.333 0.00 0.00 42.46 2.24
463 464 9.883142 CTCAGGAAACTCTGAAATTCTACTAAT 57.117 33.333 0.00 0.00 42.46 1.73
464 465 9.658799 TCAGGAAACTCTGAAATTCTACTAATG 57.341 33.333 0.00 0.00 40.43 1.90
465 466 9.658799 CAGGAAACTCTGAAATTCTACTAATGA 57.341 33.333 0.00 0.00 40.21 2.57
489 490 9.958180 TGATAAGTCATTCTCAACATAAGGAAA 57.042 29.630 0.00 0.00 0.00 3.13
519 520 6.884280 AATAAGTGGAGTCAAAGTTTCTGG 57.116 37.500 0.00 0.00 0.00 3.86
532 533 1.479323 GTTTCTGGTCCATGCATGCAT 59.521 47.619 27.46 27.46 37.08 3.96
533 534 1.855295 TTCTGGTCCATGCATGCATT 58.145 45.000 30.32 13.26 33.90 3.56
534 535 1.107945 TCTGGTCCATGCATGCATTG 58.892 50.000 30.32 26.09 33.90 2.82
535 536 0.104120 CTGGTCCATGCATGCATTGG 59.896 55.000 30.32 29.42 33.90 3.16
536 537 0.615261 TGGTCCATGCATGCATTGGT 60.615 50.000 30.32 8.24 33.90 3.67
552 553 6.753180 TGCATTGGTTAAGCAAATCAACTTA 58.247 32.000 22.71 0.00 40.95 2.24
553 554 6.644592 TGCATTGGTTAAGCAAATCAACTTAC 59.355 34.615 22.71 1.77 40.95 2.34
562 563 6.224420 AGCAAATCAACTTACGTGAACTAC 57.776 37.500 0.00 0.00 0.00 2.73
603 604 0.109532 TTGTTGGTTGATCTCCGGCA 59.890 50.000 0.00 0.00 0.00 5.69
695 696 4.582656 ACTGATTCTGTCCGAGGATAAGAG 59.417 45.833 0.00 0.00 0.00 2.85
696 697 3.891977 TGATTCTGTCCGAGGATAAGAGG 59.108 47.826 0.00 0.00 0.00 3.69
749 750 3.379057 CAGCTGTAATGATGTGATTGGCA 59.621 43.478 5.25 0.00 0.00 4.92
752 753 4.980434 GCTGTAATGATGTGATTGGCATTC 59.020 41.667 2.48 2.48 33.45 2.67
753 754 5.450826 GCTGTAATGATGTGATTGGCATTCA 60.451 40.000 7.94 7.94 33.45 2.57
784 785 2.361757 TGCAACAGAAGTTTGACATGGG 59.638 45.455 0.00 0.00 35.28 4.00
789 790 3.319122 ACAGAAGTTTGACATGGGCTTTC 59.681 43.478 0.00 0.00 0.00 2.62
830 831 6.151144 TGCCTTTCTAGAAGGATTTGTTTAGC 59.849 38.462 15.74 7.73 39.81 3.09
831 832 6.151144 GCCTTTCTAGAAGGATTTGTTTAGCA 59.849 38.462 15.74 0.00 39.81 3.49
834 835 7.630242 TTCTAGAAGGATTTGTTTAGCATGG 57.370 36.000 0.00 0.00 0.00 3.66
836 837 4.677182 AGAAGGATTTGTTTAGCATGGGT 58.323 39.130 0.00 0.00 0.00 4.51
840 841 3.369366 GGATTTGTTTAGCATGGGTTGGG 60.369 47.826 0.00 0.00 0.00 4.12
860 861 4.411869 TGGGGAGATAACATTGACTGCATA 59.588 41.667 0.00 0.00 0.00 3.14
861 862 5.104151 TGGGGAGATAACATTGACTGCATAA 60.104 40.000 0.00 0.00 0.00 1.90
888 889 8.589335 TTTCTATATCGATTGCAACTAAGGAC 57.411 34.615 1.71 0.00 0.00 3.85
973 974 8.411991 AATTTTTGCTGAATCCCATTTCATTT 57.588 26.923 0.00 0.00 35.20 2.32
1079 1092 1.074566 CAACAGCTCCTTCCCTTCCTT 59.925 52.381 0.00 0.00 0.00 3.36
1080 1093 0.988063 ACAGCTCCTTCCCTTCCTTC 59.012 55.000 0.00 0.00 0.00 3.46
1104 1117 2.278857 ATCGTCATCGGTGCGCTC 60.279 61.111 9.73 4.47 37.69 5.03
1138 1151 4.165565 AGGGCTAACTACAGTTTTATCCCC 59.834 45.833 0.00 4.12 39.31 4.81
1156 1169 4.835678 TCCCCCGTAAAACTTATGAAGAC 58.164 43.478 0.00 0.00 0.00 3.01
1159 1172 6.384886 TCCCCCGTAAAACTTATGAAGACTAT 59.615 38.462 0.00 0.00 0.00 2.12
1200 1213 7.757097 ATGTCTAGTACTACGAATTTTGCTG 57.243 36.000 0.00 0.00 0.00 4.41
1626 1672 1.219124 GAGCAGTTCATGGCGGAGA 59.781 57.895 0.00 0.00 34.54 3.71
1688 1737 1.066303 CTCTTCGGCTTCTGCTACGAT 59.934 52.381 0.00 0.00 39.59 3.73
1693 1742 2.875786 GCTTCTGCTACGATGCCGC 61.876 63.158 0.00 0.00 36.26 6.53
1694 1743 1.227089 CTTCTGCTACGATGCCGCT 60.227 57.895 0.00 0.00 39.95 5.52
1695 1744 1.485838 CTTCTGCTACGATGCCGCTG 61.486 60.000 0.00 0.00 39.95 5.18
2024 2082 3.704231 GATGTGGATGCAGGCCGGT 62.704 63.158 1.90 0.00 0.00 5.28
2084 2142 1.254975 TGTTTGAGATCCTCGGCCGA 61.255 55.000 29.03 29.03 32.35 5.54
2306 2376 0.251341 GGGTGGTGGTGAAGATGCTT 60.251 55.000 0.00 0.00 0.00 3.91
2335 2405 3.728373 GGACATTGCTCCCCCGGT 61.728 66.667 0.00 0.00 0.00 5.28
2469 2539 8.074474 TCGTGAAATTTGTTCGACATAAACTA 57.926 30.769 0.00 0.00 0.00 2.24
2527 2597 0.249996 TTTTCGTCTTCCCGTGTCCC 60.250 55.000 0.00 0.00 0.00 4.46
2528 2598 2.103339 TTTCGTCTTCCCGTGTCCCC 62.103 60.000 0.00 0.00 0.00 4.81
2529 2599 2.995574 CGTCTTCCCGTGTCCCCT 60.996 66.667 0.00 0.00 0.00 4.79
2530 2600 2.979649 GTCTTCCCGTGTCCCCTC 59.020 66.667 0.00 0.00 0.00 4.30
2531 2601 2.284405 TCTTCCCGTGTCCCCTCC 60.284 66.667 0.00 0.00 0.00 4.30
2532 2602 3.400054 CTTCCCGTGTCCCCTCCC 61.400 72.222 0.00 0.00 0.00 4.30
2537 2607 2.687902 CGTGTCCCCTCCCCTCTA 59.312 66.667 0.00 0.00 0.00 2.43
2596 2666 3.165890 CGTCGTATCGTTTAGCTCACAA 58.834 45.455 0.00 0.00 0.00 3.33
2633 2703 1.067416 GCGAGCATCATGGACCGTA 59.933 57.895 0.00 0.00 33.17 4.02
2648 2718 3.425578 CGTAGGTTCTGCAGTCCTG 57.574 57.895 29.30 17.43 33.34 3.86
2687 2757 5.295045 AGGGAAAGTTTTACGTACACTTGTG 59.705 40.000 16.49 0.00 31.00 3.33
2725 2795 1.069227 CGTTTGCTACCAGCTGTTTCC 60.069 52.381 13.81 0.00 42.97 3.13
2741 2811 2.030562 CCTGGGTCGTGGTGTCAC 59.969 66.667 0.00 0.00 40.36 3.67
2752 2822 2.224079 CGTGGTGTCACTGAGGAAAATG 59.776 50.000 2.35 0.00 41.53 2.32
2754 2824 3.882888 GTGGTGTCACTGAGGAAAATGAA 59.117 43.478 2.35 0.00 40.58 2.57
2757 2827 4.338118 GGTGTCACTGAGGAAAATGAAACA 59.662 41.667 2.35 0.00 31.92 2.83
2772 2842 3.507786 TGAAACATCACCGTGTATCGAG 58.492 45.455 0.00 0.00 42.86 4.04
2773 2843 2.579207 AACATCACCGTGTATCGAGG 57.421 50.000 0.00 0.00 42.86 4.63
2774 2844 1.471119 ACATCACCGTGTATCGAGGT 58.529 50.000 0.00 0.00 42.86 3.85
2775 2845 1.822990 ACATCACCGTGTATCGAGGTT 59.177 47.619 0.00 0.00 42.86 3.50
2776 2846 2.232941 ACATCACCGTGTATCGAGGTTT 59.767 45.455 0.00 0.00 42.86 3.27
2777 2847 3.444742 ACATCACCGTGTATCGAGGTTTA 59.555 43.478 0.00 0.00 42.86 2.01
2778 2848 4.082081 ACATCACCGTGTATCGAGGTTTAA 60.082 41.667 0.00 0.00 42.86 1.52
2779 2849 4.100707 TCACCGTGTATCGAGGTTTAAG 57.899 45.455 0.00 0.00 42.86 1.85
2780 2850 2.601763 CACCGTGTATCGAGGTTTAAGC 59.398 50.000 0.00 0.00 42.86 3.09
2781 2851 2.231964 ACCGTGTATCGAGGTTTAAGCA 59.768 45.455 0.00 0.00 42.86 3.91
2782 2852 3.118884 ACCGTGTATCGAGGTTTAAGCAT 60.119 43.478 0.00 0.00 42.86 3.79
2783 2853 4.098349 ACCGTGTATCGAGGTTTAAGCATA 59.902 41.667 0.00 0.00 42.86 3.14
2784 2854 4.680110 CCGTGTATCGAGGTTTAAGCATAG 59.320 45.833 0.00 0.00 42.86 2.23
2785 2855 5.279384 CGTGTATCGAGGTTTAAGCATAGT 58.721 41.667 0.00 0.00 42.86 2.12
2786 2856 5.747197 CGTGTATCGAGGTTTAAGCATAGTT 59.253 40.000 0.00 0.00 42.86 2.24
2787 2857 6.255020 CGTGTATCGAGGTTTAAGCATAGTTT 59.745 38.462 0.00 0.00 42.86 2.66
2788 2858 7.201496 CGTGTATCGAGGTTTAAGCATAGTTTT 60.201 37.037 0.00 0.00 42.86 2.43
2789 2859 9.090692 GTGTATCGAGGTTTAAGCATAGTTTTA 57.909 33.333 0.00 0.00 0.00 1.52
2790 2860 9.656040 TGTATCGAGGTTTAAGCATAGTTTTAA 57.344 29.630 0.00 0.00 0.00 1.52
2795 2865 9.434559 CGAGGTTTAAGCATAGTTTTAAATAGC 57.565 33.333 0.00 0.00 33.02 2.97
2796 2866 9.434559 GAGGTTTAAGCATAGTTTTAAATAGCG 57.565 33.333 0.00 0.00 33.02 4.26
2797 2867 7.913821 AGGTTTAAGCATAGTTTTAAATAGCGC 59.086 33.333 0.00 0.00 33.02 5.92
2798 2868 7.097168 GGTTTAAGCATAGTTTTAAATAGCGCG 60.097 37.037 0.00 0.00 33.02 6.86
2799 2869 3.873529 AGCATAGTTTTAAATAGCGCGC 58.126 40.909 26.66 26.66 0.00 6.86
2800 2870 3.560068 AGCATAGTTTTAAATAGCGCGCT 59.440 39.130 38.01 38.01 0.00 5.92
2801 2871 4.748102 AGCATAGTTTTAAATAGCGCGCTA 59.252 37.500 39.72 39.72 0.00 4.26
2802 2872 5.235616 AGCATAGTTTTAAATAGCGCGCTAA 59.764 36.000 40.90 26.03 31.73 3.09
2803 2873 6.073222 AGCATAGTTTTAAATAGCGCGCTAAT 60.073 34.615 40.90 32.14 31.73 1.73
2804 2874 6.577427 GCATAGTTTTAAATAGCGCGCTAATT 59.423 34.615 40.90 37.95 31.73 1.40
2805 2875 7.742963 GCATAGTTTTAAATAGCGCGCTAATTA 59.257 33.333 40.90 36.90 31.73 1.40
2806 2876 9.250986 CATAGTTTTAAATAGCGCGCTAATTAG 57.749 33.333 40.90 24.30 29.11 1.73
2807 2877 6.134061 AGTTTTAAATAGCGCGCTAATTAGC 58.866 36.000 40.90 30.29 45.62 3.09
2820 2890 4.917887 CTAATTAGCATCTTAGCGGCAG 57.082 45.455 1.45 0.00 40.15 4.85
2821 2891 3.475566 AATTAGCATCTTAGCGGCAGA 57.524 42.857 1.45 0.00 40.15 4.26
2822 2892 2.225068 TTAGCATCTTAGCGGCAGAC 57.775 50.000 1.45 0.00 40.15 3.51
2823 2893 0.389391 TAGCATCTTAGCGGCAGACC 59.611 55.000 1.45 0.00 40.15 3.85
2824 2894 1.144936 GCATCTTAGCGGCAGACCT 59.855 57.895 1.45 0.00 0.00 3.85
2825 2895 0.878086 GCATCTTAGCGGCAGACCTC 60.878 60.000 1.45 0.00 0.00 3.85
2826 2896 0.749649 CATCTTAGCGGCAGACCTCT 59.250 55.000 1.45 0.00 34.60 3.69
2827 2897 1.137872 CATCTTAGCGGCAGACCTCTT 59.862 52.381 1.45 0.00 31.87 2.85
2828 2898 0.818296 TCTTAGCGGCAGACCTCTTC 59.182 55.000 1.45 0.00 31.87 2.87
2829 2899 0.179097 CTTAGCGGCAGACCTCTTCC 60.179 60.000 1.45 0.00 31.87 3.46
2830 2900 0.902984 TTAGCGGCAGACCTCTTCCA 60.903 55.000 1.45 0.00 31.87 3.53
2831 2901 0.902984 TAGCGGCAGACCTCTTCCAA 60.903 55.000 1.45 0.00 31.87 3.53
2832 2902 1.302511 GCGGCAGACCTCTTCCAAA 60.303 57.895 0.00 0.00 0.00 3.28
2833 2903 0.678048 GCGGCAGACCTCTTCCAAAT 60.678 55.000 0.00 0.00 0.00 2.32
2834 2904 1.406887 GCGGCAGACCTCTTCCAAATA 60.407 52.381 0.00 0.00 0.00 1.40
2835 2905 2.280628 CGGCAGACCTCTTCCAAATAC 58.719 52.381 0.00 0.00 0.00 1.89
2836 2906 2.093447 CGGCAGACCTCTTCCAAATACT 60.093 50.000 0.00 0.00 0.00 2.12
2837 2907 3.132289 CGGCAGACCTCTTCCAAATACTA 59.868 47.826 0.00 0.00 0.00 1.82
2838 2908 4.202264 CGGCAGACCTCTTCCAAATACTAT 60.202 45.833 0.00 0.00 0.00 2.12
2839 2909 5.010719 CGGCAGACCTCTTCCAAATACTATA 59.989 44.000 0.00 0.00 0.00 1.31
2840 2910 6.459923 GGCAGACCTCTTCCAAATACTATAG 58.540 44.000 0.00 0.00 0.00 1.31
2841 2911 5.929415 GCAGACCTCTTCCAAATACTATAGC 59.071 44.000 0.00 0.00 0.00 2.97
2842 2912 6.153067 CAGACCTCTTCCAAATACTATAGCG 58.847 44.000 0.00 0.00 0.00 4.26
2843 2913 5.834204 AGACCTCTTCCAAATACTATAGCGT 59.166 40.000 0.00 0.00 0.00 5.07
2844 2914 5.844004 ACCTCTTCCAAATACTATAGCGTG 58.156 41.667 0.00 0.00 0.00 5.34
2845 2915 4.686554 CCTCTTCCAAATACTATAGCGTGC 59.313 45.833 0.00 0.00 0.00 5.34
2846 2916 5.509840 CCTCTTCCAAATACTATAGCGTGCT 60.510 44.000 0.00 0.00 0.00 4.40
2847 2917 6.294564 CCTCTTCCAAATACTATAGCGTGCTA 60.295 42.308 3.73 3.73 0.00 3.49
2848 2918 7.228314 TCTTCCAAATACTATAGCGTGCTAT 57.772 36.000 17.65 17.65 41.58 2.97
2849 2919 8.344446 TCTTCCAAATACTATAGCGTGCTATA 57.656 34.615 17.96 17.96 39.65 1.31
2859 2929 7.736031 CTATAGCGTGCTATAGCGAATTTAA 57.264 36.000 27.04 5.13 46.26 1.52
2860 2930 8.169839 CTATAGCGTGCTATAGCGAATTTAAA 57.830 34.615 27.04 4.71 46.26 1.52
2861 2931 5.728351 AGCGTGCTATAGCGAATTTAAAA 57.272 34.783 19.55 0.00 45.83 1.52
2862 2932 6.300354 AGCGTGCTATAGCGAATTTAAAAT 57.700 33.333 19.55 0.00 45.83 1.82
2863 2933 6.136071 AGCGTGCTATAGCGAATTTAAAATG 58.864 36.000 19.55 5.63 45.83 2.32
2864 2934 5.907391 GCGTGCTATAGCGAATTTAAAATGT 59.093 36.000 19.55 0.00 45.83 2.71
2865 2935 6.413818 GCGTGCTATAGCGAATTTAAAATGTT 59.586 34.615 19.55 0.00 45.83 2.71
2866 2936 7.044314 GCGTGCTATAGCGAATTTAAAATGTTT 60.044 33.333 19.55 0.00 45.83 2.83
2867 2937 8.252454 CGTGCTATAGCGAATTTAAAATGTTTG 58.748 33.333 19.55 0.00 45.83 2.93
2868 2938 9.072294 GTGCTATAGCGAATTTAAAATGTTTGT 57.928 29.630 19.55 0.00 45.83 2.83
2869 2939 9.632807 TGCTATAGCGAATTTAAAATGTTTGTT 57.367 25.926 19.55 0.00 45.83 2.83
2875 2945 9.649024 AGCGAATTTAAAATGTTTGTTCATTTG 57.351 25.926 5.61 0.00 44.10 2.32
2876 2946 9.432077 GCGAATTTAAAATGTTTGTTCATTTGT 57.568 25.926 5.61 0.98 44.10 2.83
2884 2954 9.442047 AAAATGTTTGTTCATTTGTTTAGACCA 57.558 25.926 5.61 0.00 44.10 4.02
2885 2955 9.442047 AAATGTTTGTTCATTTGTTTAGACCAA 57.558 25.926 4.25 0.00 43.50 3.67
2886 2956 9.442047 AATGTTTGTTCATTTGTTTAGACCAAA 57.558 25.926 0.00 0.00 34.86 3.28
2887 2957 8.472683 TGTTTGTTCATTTGTTTAGACCAAAG 57.527 30.769 0.00 0.00 35.45 2.77
2888 2958 8.091449 TGTTTGTTCATTTGTTTAGACCAAAGT 58.909 29.630 0.00 0.00 35.45 2.66
2889 2959 8.592155 GTTTGTTCATTTGTTTAGACCAAAGTC 58.408 33.333 0.00 0.00 43.89 3.01
2903 2973 6.895607 GACCAAAGTCTCTTAGCATAAGAC 57.104 41.667 0.00 0.00 40.10 3.01
2904 2974 5.735766 ACCAAAGTCTCTTAGCATAAGACC 58.264 41.667 0.00 0.00 40.21 3.85
2905 2975 5.485708 ACCAAAGTCTCTTAGCATAAGACCT 59.514 40.000 0.00 0.00 40.21 3.85
2906 2976 6.013293 ACCAAAGTCTCTTAGCATAAGACCTT 60.013 38.462 0.00 0.00 40.21 3.50
2907 2977 6.881602 CCAAAGTCTCTTAGCATAAGACCTTT 59.118 38.462 10.67 10.67 40.21 3.11
2908 2978 7.391833 CCAAAGTCTCTTAGCATAAGACCTTTT 59.608 37.037 12.42 6.57 40.21 2.27
2909 2979 7.913674 AAGTCTCTTAGCATAAGACCTTTTG 57.086 36.000 0.00 0.00 40.21 2.44
2910 2980 7.010339 AGTCTCTTAGCATAAGACCTTTTGT 57.990 36.000 0.00 0.00 40.21 2.83
2911 2981 8.135382 AGTCTCTTAGCATAAGACCTTTTGTA 57.865 34.615 0.00 0.00 40.21 2.41
2912 2982 8.594550 AGTCTCTTAGCATAAGACCTTTTGTAA 58.405 33.333 0.00 1.30 40.21 2.41
2913 2983 9.216117 GTCTCTTAGCATAAGACCTTTTGTAAA 57.784 33.333 0.00 0.00 34.63 2.01
2914 2984 9.216117 TCTCTTAGCATAAGACCTTTTGTAAAC 57.784 33.333 0.00 0.00 0.00 2.01
2915 2985 8.025243 TCTTAGCATAAGACCTTTTGTAAACG 57.975 34.615 0.00 0.00 0.00 3.60
2916 2986 5.043189 AGCATAAGACCTTTTGTAAACGC 57.957 39.130 0.00 0.00 0.00 4.84
2917 2987 4.760204 AGCATAAGACCTTTTGTAAACGCT 59.240 37.500 0.00 0.00 0.00 5.07
2918 2988 5.935789 AGCATAAGACCTTTTGTAAACGCTA 59.064 36.000 0.00 0.00 0.00 4.26
2919 2989 6.598064 AGCATAAGACCTTTTGTAAACGCTAT 59.402 34.615 0.00 0.00 0.00 2.97
2920 2990 7.767198 AGCATAAGACCTTTTGTAAACGCTATA 59.233 33.333 0.00 0.00 0.00 1.31
2921 2991 8.062448 GCATAAGACCTTTTGTAAACGCTATAG 58.938 37.037 0.00 0.00 0.00 1.31
2922 2992 6.418585 AAGACCTTTTGTAAACGCTATAGC 57.581 37.500 15.09 15.09 37.78 2.97
2937 3007 4.022464 CTATAGCGTGCTATAGTGGAGC 57.978 50.000 28.67 2.94 46.57 4.70
2938 3008 1.982660 TAGCGTGCTATAGTGGAGCT 58.017 50.000 14.84 14.84 40.76 4.09
2939 3009 1.982660 AGCGTGCTATAGTGGAGCTA 58.017 50.000 10.75 0.00 40.76 3.32
2940 3010 2.520069 AGCGTGCTATAGTGGAGCTAT 58.480 47.619 10.75 0.00 42.63 2.97
2941 3011 3.687125 AGCGTGCTATAGTGGAGCTATA 58.313 45.455 10.75 0.00 40.61 1.31
2958 3028 5.934935 GCTATAGCGGGCTATTTAAAACA 57.065 39.130 17.49 0.00 39.65 2.83
2959 3029 5.928153 GCTATAGCGGGCTATTTAAAACAG 58.072 41.667 17.49 8.76 39.65 3.16
2960 3030 5.469084 GCTATAGCGGGCTATTTAAAACAGT 59.531 40.000 17.49 0.00 39.65 3.55
2961 3031 5.751243 ATAGCGGGCTATTTAAAACAGTG 57.249 39.130 7.36 0.00 35.92 3.66
2979 3049 0.249531 TGCGTTTAAGCCGAGTGACA 60.250 50.000 1.29 0.00 36.02 3.58
2994 3064 4.065088 GAGTGACAAAACATGGCTACTCA 58.935 43.478 0.00 0.00 41.25 3.41
3023 3093 7.124573 ACATGAGTTACATCCACATAAGCTA 57.875 36.000 0.00 0.00 37.07 3.32
3027 3097 5.368989 AGTTACATCCACATAAGCTAAGCC 58.631 41.667 0.00 0.00 0.00 4.35
3033 3103 2.945668 CCACATAAGCTAAGCCAGGAAC 59.054 50.000 0.00 0.00 0.00 3.62
3037 3107 0.690762 AAGCTAAGCCAGGAACGGAA 59.309 50.000 0.00 0.00 0.00 4.30
3044 3114 0.591659 GCCAGGAACGGAAAACTCAC 59.408 55.000 0.00 0.00 0.00 3.51
3123 3193 6.459670 TGTATGACACTCGGCTTAAAGATA 57.540 37.500 0.00 0.00 0.00 1.98
3124 3194 6.504398 TGTATGACACTCGGCTTAAAGATAG 58.496 40.000 0.00 0.00 0.00 2.08
3210 3280 2.176364 TGGTATAAGCCGAGTACCCTCT 59.824 50.000 0.00 0.00 37.63 3.69
3375 3446 1.339610 CGCCCTATCTTCACCTCTCTG 59.660 57.143 0.00 0.00 0.00 3.35
3380 3451 4.714308 CCCTATCTTCACCTCTCTGACTTT 59.286 45.833 0.00 0.00 0.00 2.66
3381 3452 5.395103 CCCTATCTTCACCTCTCTGACTTTG 60.395 48.000 0.00 0.00 0.00 2.77
3382 3453 5.186797 CCTATCTTCACCTCTCTGACTTTGT 59.813 44.000 0.00 0.00 0.00 2.83
3386 3457 1.341531 CACCTCTCTGACTTTGTCGGT 59.658 52.381 6.45 0.00 39.68 4.69
3408 3479 4.373116 TTCACTCCGCCAGCGACC 62.373 66.667 14.67 0.00 42.83 4.79
3433 3504 1.705337 CCACCGCCTTAACGCATCTG 61.705 60.000 0.00 0.00 0.00 2.90
3442 3513 1.686325 TAACGCATCTGGAGCCTCCC 61.686 60.000 8.62 0.00 35.03 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.280197 TGACTATAGCTTTGGCATGCA 57.720 42.857 21.36 2.54 41.70 3.96
1 2 5.471456 ACTTATGACTATAGCTTTGGCATGC 59.529 40.000 9.90 9.90 41.70 4.06
2 3 6.128715 CGACTTATGACTATAGCTTTGGCATG 60.129 42.308 10.63 0.00 41.70 4.06
3 4 5.928839 CGACTTATGACTATAGCTTTGGCAT 59.071 40.000 0.00 0.00 41.70 4.40
4 5 5.163447 ACGACTTATGACTATAGCTTTGGCA 60.163 40.000 0.00 0.00 41.70 4.92
5 6 5.290386 ACGACTTATGACTATAGCTTTGGC 58.710 41.667 0.00 0.00 39.06 4.52
6 7 7.203910 AGAACGACTTATGACTATAGCTTTGG 58.796 38.462 0.00 0.00 0.00 3.28
7 8 7.915923 TGAGAACGACTTATGACTATAGCTTTG 59.084 37.037 0.00 0.00 0.00 2.77
8 9 7.997482 TGAGAACGACTTATGACTATAGCTTT 58.003 34.615 0.00 0.00 0.00 3.51
9 10 7.569639 TGAGAACGACTTATGACTATAGCTT 57.430 36.000 0.00 0.00 0.00 3.74
10 11 7.067129 TGTTGAGAACGACTTATGACTATAGCT 59.933 37.037 0.00 0.00 0.00 3.32
11 12 7.194278 TGTTGAGAACGACTTATGACTATAGC 58.806 38.462 0.00 0.00 0.00 2.97
12 13 9.569167 TTTGTTGAGAACGACTTATGACTATAG 57.431 33.333 0.00 0.00 0.00 1.31
13 14 9.917129 TTTTGTTGAGAACGACTTATGACTATA 57.083 29.630 0.00 0.00 0.00 1.31
14 15 8.827177 TTTTGTTGAGAACGACTTATGACTAT 57.173 30.769 0.00 0.00 0.00 2.12
15 16 8.651391 TTTTTGTTGAGAACGACTTATGACTA 57.349 30.769 0.00 0.00 0.00 2.59
16 17 7.494625 TCTTTTTGTTGAGAACGACTTATGACT 59.505 33.333 0.00 0.00 0.00 3.41
17 18 7.627340 TCTTTTTGTTGAGAACGACTTATGAC 58.373 34.615 0.00 0.00 0.00 3.06
18 19 7.780008 TCTTTTTGTTGAGAACGACTTATGA 57.220 32.000 0.00 0.00 0.00 2.15
19 20 7.112148 GCTTCTTTTTGTTGAGAACGACTTATG 59.888 37.037 0.00 0.00 0.00 1.90
20 21 7.012421 AGCTTCTTTTTGTTGAGAACGACTTAT 59.988 33.333 0.00 0.00 0.00 1.73
21 22 6.315393 AGCTTCTTTTTGTTGAGAACGACTTA 59.685 34.615 0.00 0.00 0.00 2.24
22 23 5.123979 AGCTTCTTTTTGTTGAGAACGACTT 59.876 36.000 0.00 0.00 0.00 3.01
23 24 4.636206 AGCTTCTTTTTGTTGAGAACGACT 59.364 37.500 0.00 0.00 0.00 4.18
24 25 4.909894 AGCTTCTTTTTGTTGAGAACGAC 58.090 39.130 0.00 0.00 0.00 4.34
25 26 5.123186 TGAAGCTTCTTTTTGTTGAGAACGA 59.877 36.000 26.09 0.00 0.00 3.85
26 27 5.331902 TGAAGCTTCTTTTTGTTGAGAACG 58.668 37.500 26.09 0.00 0.00 3.95
27 28 8.856490 TTATGAAGCTTCTTTTTGTTGAGAAC 57.144 30.769 26.09 0.00 0.00 3.01
33 34 9.696917 CCACTTATTATGAAGCTTCTTTTTGTT 57.303 29.630 26.09 8.18 0.00 2.83
34 35 9.077885 TCCACTTATTATGAAGCTTCTTTTTGT 57.922 29.630 26.09 13.33 0.00 2.83
35 36 9.565213 CTCCACTTATTATGAAGCTTCTTTTTG 57.435 33.333 26.09 12.77 0.00 2.44
36 37 9.301897 ACTCCACTTATTATGAAGCTTCTTTTT 57.698 29.630 26.09 13.23 0.00 1.94
37 38 8.870075 ACTCCACTTATTATGAAGCTTCTTTT 57.130 30.769 26.09 13.81 0.00 2.27
38 39 8.103305 TGACTCCACTTATTATGAAGCTTCTTT 58.897 33.333 26.09 16.13 0.00 2.52
39 40 7.624549 TGACTCCACTTATTATGAAGCTTCTT 58.375 34.615 26.09 21.81 0.00 2.52
40 41 7.187824 TGACTCCACTTATTATGAAGCTTCT 57.812 36.000 26.09 14.44 0.00 2.85
41 42 7.849804 TTGACTCCACTTATTATGAAGCTTC 57.150 36.000 19.89 19.89 0.00 3.86
42 43 7.885399 ACTTTGACTCCACTTATTATGAAGCTT 59.115 33.333 0.00 0.00 0.00 3.74
43 44 7.398024 ACTTTGACTCCACTTATTATGAAGCT 58.602 34.615 0.00 0.00 0.00 3.74
44 45 7.617041 ACTTTGACTCCACTTATTATGAAGC 57.383 36.000 0.00 0.00 0.00 3.86
46 47 9.793259 AGAAACTTTGACTCCACTTATTATGAA 57.207 29.630 0.00 0.00 0.00 2.57
50 51 9.924650 GACTAGAAACTTTGACTCCACTTATTA 57.075 33.333 0.00 0.00 0.00 0.98
51 52 7.878644 GGACTAGAAACTTTGACTCCACTTATT 59.121 37.037 0.00 0.00 0.00 1.40
52 53 7.016268 TGGACTAGAAACTTTGACTCCACTTAT 59.984 37.037 0.00 0.00 0.00 1.73
53 54 6.325545 TGGACTAGAAACTTTGACTCCACTTA 59.674 38.462 0.00 0.00 0.00 2.24
54 55 5.130477 TGGACTAGAAACTTTGACTCCACTT 59.870 40.000 0.00 0.00 0.00 3.16
55 56 4.654262 TGGACTAGAAACTTTGACTCCACT 59.346 41.667 0.00 0.00 0.00 4.00
56 57 4.957296 TGGACTAGAAACTTTGACTCCAC 58.043 43.478 0.00 0.00 0.00 4.02
57 58 5.551233 CATGGACTAGAAACTTTGACTCCA 58.449 41.667 0.00 0.00 0.00 3.86
58 59 4.393371 GCATGGACTAGAAACTTTGACTCC 59.607 45.833 0.00 0.00 0.00 3.85
59 60 4.997395 TGCATGGACTAGAAACTTTGACTC 59.003 41.667 0.00 0.00 0.00 3.36
60 61 4.973168 TGCATGGACTAGAAACTTTGACT 58.027 39.130 0.00 0.00 0.00 3.41
61 62 5.886960 ATGCATGGACTAGAAACTTTGAC 57.113 39.130 0.00 0.00 0.00 3.18
62 63 6.472016 TGTATGCATGGACTAGAAACTTTGA 58.528 36.000 10.16 0.00 0.00 2.69
63 64 6.741992 TGTATGCATGGACTAGAAACTTTG 57.258 37.500 10.16 0.00 0.00 2.77
64 65 7.148018 CCAATGTATGCATGGACTAGAAACTTT 60.148 37.037 10.16 0.00 35.15 2.66
65 66 6.319658 CCAATGTATGCATGGACTAGAAACTT 59.680 38.462 10.16 0.00 35.15 2.66
66 67 5.824624 CCAATGTATGCATGGACTAGAAACT 59.175 40.000 10.16 0.00 35.15 2.66
67 68 5.506317 GCCAATGTATGCATGGACTAGAAAC 60.506 44.000 10.16 0.00 35.15 2.78
68 69 4.580167 GCCAATGTATGCATGGACTAGAAA 59.420 41.667 10.16 0.00 35.15 2.52
69 70 4.136796 GCCAATGTATGCATGGACTAGAA 58.863 43.478 10.16 0.00 35.15 2.10
70 71 3.136260 TGCCAATGTATGCATGGACTAGA 59.864 43.478 10.16 0.00 35.15 2.43
71 72 3.479489 TGCCAATGTATGCATGGACTAG 58.521 45.455 10.16 0.00 35.15 2.57
72 73 3.574354 TGCCAATGTATGCATGGACTA 57.426 42.857 10.16 0.00 35.15 2.59
73 74 2.428171 GTTGCCAATGTATGCATGGACT 59.572 45.455 10.16 0.00 37.33 3.85
74 75 2.795681 CGTTGCCAATGTATGCATGGAC 60.796 50.000 10.16 0.23 37.33 4.02
75 76 1.404748 CGTTGCCAATGTATGCATGGA 59.595 47.619 10.16 0.00 37.33 3.41
76 77 1.404748 TCGTTGCCAATGTATGCATGG 59.595 47.619 10.16 3.85 37.33 3.66
77 78 2.847959 TCGTTGCCAATGTATGCATG 57.152 45.000 10.16 0.00 37.33 4.06
78 79 2.031769 CGATCGTTGCCAATGTATGCAT 60.032 45.455 7.03 3.79 37.33 3.96
79 80 1.330213 CGATCGTTGCCAATGTATGCA 59.670 47.619 7.03 0.00 35.27 3.96
80 81 1.597195 TCGATCGTTGCCAATGTATGC 59.403 47.619 15.94 0.00 0.00 3.14
81 82 2.866156 ACTCGATCGTTGCCAATGTATG 59.134 45.455 15.94 0.00 0.00 2.39
82 83 3.179443 ACTCGATCGTTGCCAATGTAT 57.821 42.857 15.94 0.00 0.00 2.29
83 84 2.665649 ACTCGATCGTTGCCAATGTA 57.334 45.000 15.94 0.00 0.00 2.29
84 85 1.808411 AACTCGATCGTTGCCAATGT 58.192 45.000 15.94 0.28 0.00 2.71
85 86 2.508867 CAAACTCGATCGTTGCCAATG 58.491 47.619 15.94 3.15 0.00 2.82
86 87 1.135689 GCAAACTCGATCGTTGCCAAT 60.136 47.619 23.85 2.16 0.00 3.16
87 88 0.237235 GCAAACTCGATCGTTGCCAA 59.763 50.000 23.85 1.67 0.00 4.52
88 89 1.573829 GGCAAACTCGATCGTTGCCA 61.574 55.000 36.66 13.25 39.11 4.92
89 90 1.134694 GGCAAACTCGATCGTTGCC 59.865 57.895 32.23 32.23 35.53 4.52
90 91 1.225745 CGGCAAACTCGATCGTTGC 60.226 57.895 25.40 25.40 0.00 4.17
91 92 0.366871 CTCGGCAAACTCGATCGTTG 59.633 55.000 15.94 13.33 36.01 4.10
92 93 0.242825 TCTCGGCAAACTCGATCGTT 59.757 50.000 15.94 0.00 36.01 3.85
93 94 0.456221 ATCTCGGCAAACTCGATCGT 59.544 50.000 15.94 0.00 36.01 3.73
94 95 1.124462 GATCTCGGCAAACTCGATCG 58.876 55.000 9.36 9.36 36.01 3.69
95 96 2.209838 TGATCTCGGCAAACTCGATC 57.790 50.000 0.00 0.00 36.01 3.69
96 97 2.477825 CATGATCTCGGCAAACTCGAT 58.522 47.619 0.00 0.00 36.01 3.59
97 98 1.926561 CATGATCTCGGCAAACTCGA 58.073 50.000 0.00 0.00 35.24 4.04
98 99 0.302890 GCATGATCTCGGCAAACTCG 59.697 55.000 0.00 0.00 0.00 4.18
99 100 0.302890 CGCATGATCTCGGCAAACTC 59.697 55.000 0.00 0.00 0.00 3.01
100 101 1.091771 CCGCATGATCTCGGCAAACT 61.092 55.000 0.00 0.00 39.14 2.66
101 102 1.353103 CCGCATGATCTCGGCAAAC 59.647 57.895 0.00 0.00 39.14 2.93
102 103 1.819208 CCCGCATGATCTCGGCAAA 60.819 57.895 13.62 0.00 44.01 3.68
103 104 2.203056 CCCGCATGATCTCGGCAA 60.203 61.111 13.62 0.00 44.01 4.52
104 105 4.916293 GCCCGCATGATCTCGGCA 62.916 66.667 13.62 0.00 44.01 5.69
106 107 2.099652 TTAGGCCCGCATGATCTCGG 62.100 60.000 0.00 12.54 44.89 4.63
107 108 0.036952 ATTAGGCCCGCATGATCTCG 60.037 55.000 0.00 0.00 0.00 4.04
108 109 1.277557 AGATTAGGCCCGCATGATCTC 59.722 52.381 0.00 0.00 29.23 2.75
109 110 1.277557 GAGATTAGGCCCGCATGATCT 59.722 52.381 8.17 8.17 36.13 2.75
110 111 1.731720 GAGATTAGGCCCGCATGATC 58.268 55.000 0.00 0.00 0.00 2.92
111 112 0.036952 CGAGATTAGGCCCGCATGAT 60.037 55.000 0.00 0.00 0.00 2.45
112 113 1.367471 CGAGATTAGGCCCGCATGA 59.633 57.895 0.00 0.00 0.00 3.07
113 114 1.669115 CCGAGATTAGGCCCGCATG 60.669 63.158 0.00 0.00 0.00 4.06
114 115 2.743718 CCGAGATTAGGCCCGCAT 59.256 61.111 0.00 0.00 0.00 4.73
121 122 3.694072 TCCAAATGTTTGCCGAGATTAGG 59.306 43.478 0.00 0.00 36.86 2.69
122 123 4.963276 TCCAAATGTTTGCCGAGATTAG 57.037 40.909 0.00 0.00 36.86 1.73
123 124 4.439974 GCATCCAAATGTTTGCCGAGATTA 60.440 41.667 0.00 0.00 36.86 1.75
124 125 3.676873 GCATCCAAATGTTTGCCGAGATT 60.677 43.478 0.00 0.00 36.86 2.40
125 126 2.159198 GCATCCAAATGTTTGCCGAGAT 60.159 45.455 0.00 0.00 36.86 2.75
126 127 1.202114 GCATCCAAATGTTTGCCGAGA 59.798 47.619 0.00 0.00 36.86 4.04
127 128 1.632422 GCATCCAAATGTTTGCCGAG 58.368 50.000 0.00 0.00 36.86 4.63
128 129 0.246086 GGCATCCAAATGTTTGCCGA 59.754 50.000 7.75 0.00 44.58 5.54
129 130 2.753369 GGCATCCAAATGTTTGCCG 58.247 52.632 7.75 0.00 44.58 5.69
131 132 1.070038 CGTGGCATCCAAATGTTTGC 58.930 50.000 0.00 0.00 34.18 3.68
132 133 2.060284 CACGTGGCATCCAAATGTTTG 58.940 47.619 7.95 0.00 34.18 2.93
133 134 1.605202 GCACGTGGCATCCAAATGTTT 60.605 47.619 18.88 0.00 43.97 2.83
134 135 0.038343 GCACGTGGCATCCAAATGTT 60.038 50.000 18.88 0.00 43.97 2.71
135 136 1.586028 GCACGTGGCATCCAAATGT 59.414 52.632 18.88 0.00 43.97 2.71
136 137 1.875420 TGGCACGTGGCATCCAAATG 61.875 55.000 37.56 0.00 46.12 2.32
137 138 1.606025 TGGCACGTGGCATCCAAAT 60.606 52.632 37.56 0.00 46.12 2.32
138 139 2.203408 TGGCACGTGGCATCCAAA 60.203 55.556 37.56 16.84 46.12 3.28
145 146 3.680620 TAGGAGCATGGCACGTGGC 62.681 63.158 33.07 33.07 43.74 5.01
146 147 1.522355 CTAGGAGCATGGCACGTGG 60.522 63.158 18.88 0.86 0.00 4.94
147 148 1.522355 CCTAGGAGCATGGCACGTG 60.522 63.158 12.28 12.28 0.00 4.49
148 149 1.553690 AACCTAGGAGCATGGCACGT 61.554 55.000 17.98 0.00 0.00 4.49
149 150 0.392998 AAACCTAGGAGCATGGCACG 60.393 55.000 17.98 0.00 0.00 5.34
150 151 1.383523 GAAACCTAGGAGCATGGCAC 58.616 55.000 17.98 0.00 0.00 5.01
151 152 0.255890 GGAAACCTAGGAGCATGGCA 59.744 55.000 17.98 0.00 0.00 4.92
152 153 0.255890 TGGAAACCTAGGAGCATGGC 59.744 55.000 17.98 0.00 0.00 4.40
153 154 2.025887 ACTTGGAAACCTAGGAGCATGG 60.026 50.000 17.98 2.45 30.92 3.66
154 155 3.356529 ACTTGGAAACCTAGGAGCATG 57.643 47.619 17.98 1.78 30.92 4.06
155 156 3.619979 CGAACTTGGAAACCTAGGAGCAT 60.620 47.826 17.98 0.00 30.92 3.79
156 157 2.289444 CGAACTTGGAAACCTAGGAGCA 60.289 50.000 17.98 0.00 30.92 4.26
157 158 2.289506 ACGAACTTGGAAACCTAGGAGC 60.290 50.000 17.98 3.66 30.92 4.70
158 159 3.586892 GACGAACTTGGAAACCTAGGAG 58.413 50.000 17.98 3.24 30.92 3.69
159 160 2.029649 CGACGAACTTGGAAACCTAGGA 60.030 50.000 17.98 0.00 30.92 2.94
160 161 2.029649 TCGACGAACTTGGAAACCTAGG 60.030 50.000 7.41 7.41 30.92 3.02
161 162 3.243336 CTCGACGAACTTGGAAACCTAG 58.757 50.000 0.00 0.00 32.84 3.02
162 163 2.624838 ACTCGACGAACTTGGAAACCTA 59.375 45.455 0.00 0.00 0.00 3.08
163 164 1.411612 ACTCGACGAACTTGGAAACCT 59.588 47.619 0.00 0.00 0.00 3.50
164 165 1.791204 GACTCGACGAACTTGGAAACC 59.209 52.381 0.00 0.00 0.00 3.27
165 166 1.791204 GGACTCGACGAACTTGGAAAC 59.209 52.381 0.00 0.00 0.00 2.78
166 167 1.269936 GGGACTCGACGAACTTGGAAA 60.270 52.381 0.00 0.00 0.00 3.13
167 168 0.316204 GGGACTCGACGAACTTGGAA 59.684 55.000 0.00 0.00 0.00 3.53
168 169 1.530013 GGGGACTCGACGAACTTGGA 61.530 60.000 0.00 0.00 0.00 3.53
169 170 1.080025 GGGGACTCGACGAACTTGG 60.080 63.158 0.00 0.00 0.00 3.61
170 171 1.443872 CGGGGACTCGACGAACTTG 60.444 63.158 0.00 0.00 0.00 3.16
171 172 2.960170 CGGGGACTCGACGAACTT 59.040 61.111 0.00 0.00 0.00 2.66
172 173 3.745803 GCGGGGACTCGACGAACT 61.746 66.667 0.00 0.00 0.00 3.01
173 174 3.680338 GAGCGGGGACTCGACGAAC 62.680 68.421 0.00 0.00 0.00 3.95
174 175 3.437795 GAGCGGGGACTCGACGAA 61.438 66.667 0.00 0.00 0.00 3.85
175 176 3.914579 AAGAGCGGGGACTCGACGA 62.915 63.158 0.00 0.00 41.77 4.20
176 177 3.441290 AAGAGCGGGGACTCGACG 61.441 66.667 0.00 0.00 41.77 5.12
177 178 2.182030 CAAGAGCGGGGACTCGAC 59.818 66.667 0.00 0.00 41.77 4.20
178 179 3.068691 CCAAGAGCGGGGACTCGA 61.069 66.667 0.00 0.00 41.77 4.04
179 180 2.837371 GAACCAAGAGCGGGGACTCG 62.837 65.000 0.00 0.00 41.77 4.18
180 181 1.079057 GAACCAAGAGCGGGGACTC 60.079 63.158 0.00 0.00 36.91 3.36
181 182 1.536662 AGAACCAAGAGCGGGGACT 60.537 57.895 0.00 0.00 0.00 3.85
182 183 1.079057 GAGAACCAAGAGCGGGGAC 60.079 63.158 0.00 0.00 0.00 4.46
183 184 1.535444 TGAGAACCAAGAGCGGGGA 60.535 57.895 0.00 0.00 0.00 4.81
184 185 1.078848 CTGAGAACCAAGAGCGGGG 60.079 63.158 0.00 0.00 0.00 5.73
185 186 1.743252 GCTGAGAACCAAGAGCGGG 60.743 63.158 0.00 0.00 0.00 6.13
186 187 0.603707 TTGCTGAGAACCAAGAGCGG 60.604 55.000 0.00 0.00 33.97 5.52
187 188 1.229428 TTTGCTGAGAACCAAGAGCG 58.771 50.000 0.00 0.00 33.97 5.03
188 189 3.572584 CAATTTGCTGAGAACCAAGAGC 58.427 45.455 0.00 0.00 0.00 4.09
189 190 3.572584 GCAATTTGCTGAGAACCAAGAG 58.427 45.455 14.11 0.00 40.96 2.85
190 191 3.648339 GCAATTTGCTGAGAACCAAGA 57.352 42.857 14.11 0.00 40.96 3.02
202 203 0.947180 CCAGTGGCACAGCAATTTGC 60.947 55.000 21.41 13.55 41.80 3.68
203 204 3.204505 CCAGTGGCACAGCAATTTG 57.795 52.632 21.41 7.11 41.80 2.32
215 216 2.821366 GACGATGGCTGCCAGTGG 60.821 66.667 27.20 19.22 36.75 4.00
216 217 1.812922 GAGACGATGGCTGCCAGTG 60.813 63.158 27.20 22.20 36.75 3.66
217 218 1.986757 AGAGACGATGGCTGCCAGT 60.987 57.895 27.20 19.80 36.75 4.00
218 219 1.521010 CAGAGACGATGGCTGCCAG 60.521 63.158 27.20 16.53 36.75 4.85
219 220 2.230994 GACAGAGACGATGGCTGCCA 62.231 60.000 25.65 25.65 38.19 4.92
220 221 1.520342 GACAGAGACGATGGCTGCC 60.520 63.158 12.87 12.87 33.03 4.85
221 222 0.805322 CAGACAGAGACGATGGCTGC 60.805 60.000 3.25 0.00 46.28 5.25
222 223 3.342395 CAGACAGAGACGATGGCTG 57.658 57.895 1.94 1.94 46.81 4.85
223 224 1.515020 GCAGACAGAGACGATGGCT 59.485 57.895 0.00 0.00 36.04 4.75
224 225 1.520342 GGCAGACAGAGACGATGGC 60.520 63.158 0.00 0.00 0.00 4.40
225 226 1.142748 GGGCAGACAGAGACGATGG 59.857 63.158 0.00 0.00 0.00 3.51
226 227 1.226802 CGGGCAGACAGAGACGATG 60.227 63.158 0.00 0.00 0.00 3.84
227 228 1.658686 GACGGGCAGACAGAGACGAT 61.659 60.000 0.00 0.00 0.00 3.73
228 229 2.282251 ACGGGCAGACAGAGACGA 60.282 61.111 0.00 0.00 0.00 4.20
229 230 2.142357 TTGACGGGCAGACAGAGACG 62.142 60.000 0.00 0.00 0.00 4.18
230 231 0.389166 CTTGACGGGCAGACAGAGAC 60.389 60.000 0.00 0.00 0.00 3.36
231 232 0.827925 ACTTGACGGGCAGACAGAGA 60.828 55.000 0.00 0.00 0.00 3.10
232 233 0.389166 GACTTGACGGGCAGACAGAG 60.389 60.000 0.00 0.00 0.00 3.35
233 234 1.666011 GACTTGACGGGCAGACAGA 59.334 57.895 0.00 0.00 0.00 3.41
234 235 1.734477 CGACTTGACGGGCAGACAG 60.734 63.158 0.00 0.00 0.00 3.51
235 236 2.338620 CGACTTGACGGGCAGACA 59.661 61.111 0.00 0.00 0.00 3.41
236 237 3.112709 GCGACTTGACGGGCAGAC 61.113 66.667 0.00 0.00 0.00 3.51
237 238 2.377628 AAAGCGACTTGACGGGCAGA 62.378 55.000 0.00 0.00 0.00 4.26
238 239 1.507141 AAAAGCGACTTGACGGGCAG 61.507 55.000 0.00 0.00 0.00 4.85
239 240 1.098712 AAAAAGCGACTTGACGGGCA 61.099 50.000 0.00 0.00 0.00 5.36
240 241 1.652563 AAAAAGCGACTTGACGGGC 59.347 52.632 0.00 0.00 0.00 6.13
261 262 0.106419 AACCTGGGACTCCGCAAAAA 60.106 50.000 0.00 0.00 34.70 1.94
262 263 0.106419 AAACCTGGGACTCCGCAAAA 60.106 50.000 0.00 0.00 34.70 2.44
263 264 0.766131 TAAACCTGGGACTCCGCAAA 59.234 50.000 0.00 0.00 34.70 3.68
264 265 0.323629 CTAAACCTGGGACTCCGCAA 59.676 55.000 0.00 0.00 34.70 4.85
265 266 0.834687 ACTAAACCTGGGACTCCGCA 60.835 55.000 0.00 0.00 35.24 5.69
266 267 0.391263 CACTAAACCTGGGACTCCGC 60.391 60.000 0.00 0.00 35.24 5.54
267 268 0.391263 GCACTAAACCTGGGACTCCG 60.391 60.000 0.00 0.00 35.24 4.63
268 269 0.984995 AGCACTAAACCTGGGACTCC 59.015 55.000 0.00 0.00 0.00 3.85
269 270 1.404315 CGAGCACTAAACCTGGGACTC 60.404 57.143 0.00 0.00 0.00 3.36
270 271 0.608640 CGAGCACTAAACCTGGGACT 59.391 55.000 0.00 0.00 0.00 3.85
271 272 0.391263 CCGAGCACTAAACCTGGGAC 60.391 60.000 0.00 0.00 0.00 4.46
272 273 1.980052 CCGAGCACTAAACCTGGGA 59.020 57.895 0.00 0.00 0.00 4.37
273 274 1.745489 GCCGAGCACTAAACCTGGG 60.745 63.158 0.00 0.00 0.00 4.45
274 275 0.605319 TTGCCGAGCACTAAACCTGG 60.605 55.000 0.00 0.00 38.71 4.45
275 276 1.234821 TTTGCCGAGCACTAAACCTG 58.765 50.000 0.00 0.00 38.71 4.00
276 277 1.975660 TTTTGCCGAGCACTAAACCT 58.024 45.000 0.00 0.00 38.71 3.50
277 278 2.390938 GTTTTTGCCGAGCACTAAACC 58.609 47.619 16.42 2.08 38.71 3.27
278 279 2.041244 CGTTTTTGCCGAGCACTAAAC 58.959 47.619 16.86 16.86 38.71 2.01
279 280 1.671845 ACGTTTTTGCCGAGCACTAAA 59.328 42.857 0.00 0.95 38.71 1.85
280 281 1.301423 ACGTTTTTGCCGAGCACTAA 58.699 45.000 0.00 0.00 38.71 2.24
281 282 1.003331 CAACGTTTTTGCCGAGCACTA 60.003 47.619 0.00 0.00 38.71 2.74
282 283 0.248458 CAACGTTTTTGCCGAGCACT 60.248 50.000 0.00 0.00 38.71 4.40
283 284 0.524604 ACAACGTTTTTGCCGAGCAC 60.525 50.000 0.00 0.00 38.71 4.40
284 285 0.248296 GACAACGTTTTTGCCGAGCA 60.248 50.000 0.00 0.00 36.47 4.26
285 286 1.259544 CGACAACGTTTTTGCCGAGC 61.260 55.000 0.00 0.00 34.56 5.03
286 287 0.302288 TCGACAACGTTTTTGCCGAG 59.698 50.000 0.00 0.00 40.69 4.63
287 288 0.302288 CTCGACAACGTTTTTGCCGA 59.698 50.000 0.00 0.00 40.69 5.54
288 289 0.027063 ACTCGACAACGTTTTTGCCG 59.973 50.000 0.00 0.00 40.69 5.69
289 290 1.596220 GGACTCGACAACGTTTTTGCC 60.596 52.381 0.00 0.00 40.69 4.52
290 291 1.596220 GGGACTCGACAACGTTTTTGC 60.596 52.381 0.00 0.00 40.69 3.68
291 292 1.003223 GGGGACTCGACAACGTTTTTG 60.003 52.381 0.00 0.00 40.69 2.44
292 293 1.302366 GGGGACTCGACAACGTTTTT 58.698 50.000 0.00 0.00 40.69 1.94
293 294 0.877213 CGGGGACTCGACAACGTTTT 60.877 55.000 0.00 0.00 40.69 2.43
294 295 1.300388 CGGGGACTCGACAACGTTT 60.300 57.895 0.00 0.00 40.69 3.60
295 296 1.530013 ATCGGGGACTCGACAACGTT 61.530 55.000 0.00 0.00 42.21 3.99
296 297 1.975407 ATCGGGGACTCGACAACGT 60.975 57.895 0.00 0.00 42.21 3.99
297 298 1.516386 CATCGGGGACTCGACAACG 60.516 63.158 0.00 0.00 42.21 4.10
298 299 0.245539 TTCATCGGGGACTCGACAAC 59.754 55.000 0.00 0.00 42.21 3.32
299 300 0.245539 GTTCATCGGGGACTCGACAA 59.754 55.000 0.00 0.00 42.21 3.18
300 301 1.888018 GTTCATCGGGGACTCGACA 59.112 57.895 0.00 0.00 42.21 4.35
301 302 1.226603 CGTTCATCGGGGACTCGAC 60.227 63.158 0.00 0.00 42.21 4.20
302 303 3.193757 CGTTCATCGGGGACTCGA 58.806 61.111 0.00 0.00 43.61 4.04
311 312 1.851021 TTGCCAAGTGCCGTTCATCG 61.851 55.000 0.00 0.00 40.16 3.84
312 313 0.313672 TTTGCCAAGTGCCGTTCATC 59.686 50.000 0.00 0.00 40.16 2.92
313 314 0.314935 CTTTGCCAAGTGCCGTTCAT 59.685 50.000 0.00 0.00 40.16 2.57
314 315 1.034838 ACTTTGCCAAGTGCCGTTCA 61.035 50.000 1.73 0.00 42.05 3.18
315 316 0.948678 TACTTTGCCAAGTGCCGTTC 59.051 50.000 13.20 0.00 43.54 3.95
316 317 0.951558 CTACTTTGCCAAGTGCCGTT 59.048 50.000 13.20 0.00 43.54 4.44
317 318 0.179029 ACTACTTTGCCAAGTGCCGT 60.179 50.000 13.20 5.13 43.54 5.68
318 319 0.517316 GACTACTTTGCCAAGTGCCG 59.483 55.000 13.20 4.56 43.54 5.69
319 320 1.897560 AGACTACTTTGCCAAGTGCC 58.102 50.000 13.20 2.72 43.54 5.01
320 321 3.990318 AAAGACTACTTTGCCAAGTGC 57.010 42.857 13.20 3.21 43.54 4.40
329 330 2.636403 ACCTACCGGCAAAGACTACTTT 59.364 45.455 0.00 0.00 45.75 2.66
330 331 2.254508 ACCTACCGGCAAAGACTACTT 58.745 47.619 0.00 0.00 38.05 2.24
331 332 1.934410 ACCTACCGGCAAAGACTACT 58.066 50.000 0.00 0.00 0.00 2.57
332 333 2.740447 CAAACCTACCGGCAAAGACTAC 59.260 50.000 0.00 0.00 0.00 2.73
333 334 2.369532 ACAAACCTACCGGCAAAGACTA 59.630 45.455 0.00 0.00 0.00 2.59
334 335 1.142262 ACAAACCTACCGGCAAAGACT 59.858 47.619 0.00 0.00 0.00 3.24
335 336 1.265905 CACAAACCTACCGGCAAAGAC 59.734 52.381 0.00 0.00 0.00 3.01
336 337 1.600023 CACAAACCTACCGGCAAAGA 58.400 50.000 0.00 0.00 0.00 2.52
337 338 0.596082 CCACAAACCTACCGGCAAAG 59.404 55.000 0.00 0.00 0.00 2.77
338 339 1.457009 GCCACAAACCTACCGGCAAA 61.457 55.000 0.00 0.00 42.50 3.68
339 340 1.899534 GCCACAAACCTACCGGCAA 60.900 57.895 0.00 0.00 42.50 4.52
340 341 2.281900 GCCACAAACCTACCGGCA 60.282 61.111 0.00 0.00 42.50 5.69
341 342 3.060000 GGCCACAAACCTACCGGC 61.060 66.667 0.00 0.00 42.21 6.13
342 343 1.674322 CTGGCCACAAACCTACCGG 60.674 63.158 0.00 0.00 0.00 5.28
343 344 0.673644 CTCTGGCCACAAACCTACCG 60.674 60.000 0.00 0.00 0.00 4.02
344 345 0.400594 ACTCTGGCCACAAACCTACC 59.599 55.000 0.00 0.00 0.00 3.18
345 346 2.614734 GGTACTCTGGCCACAAACCTAC 60.615 54.545 0.00 0.00 0.00 3.18
346 347 1.626825 GGTACTCTGGCCACAAACCTA 59.373 52.381 0.00 0.00 0.00 3.08
347 348 0.400594 GGTACTCTGGCCACAAACCT 59.599 55.000 0.00 0.00 0.00 3.50
348 349 0.608308 GGGTACTCTGGCCACAAACC 60.608 60.000 0.00 7.33 0.00 3.27
349 350 0.400594 AGGGTACTCTGGCCACAAAC 59.599 55.000 0.00 0.00 0.00 2.93
350 351 1.906574 CTAGGGTACTCTGGCCACAAA 59.093 52.381 5.20 0.00 0.00 2.83
351 352 1.568504 CTAGGGTACTCTGGCCACAA 58.431 55.000 5.20 0.00 0.00 3.33
352 353 0.325296 CCTAGGGTACTCTGGCCACA 60.325 60.000 5.20 0.00 0.00 4.17
353 354 1.687297 GCCTAGGGTACTCTGGCCAC 61.687 65.000 19.79 0.00 39.26 5.01
354 355 1.382695 GCCTAGGGTACTCTGGCCA 60.383 63.158 19.79 4.71 39.26 5.36
355 356 3.552219 GCCTAGGGTACTCTGGCC 58.448 66.667 19.79 0.00 39.26 5.36
356 357 2.499827 CGGCCTAGGGTACTCTGGC 61.500 68.421 21.43 21.43 42.32 4.85
357 358 0.824182 CTCGGCCTAGGGTACTCTGG 60.824 65.000 11.72 1.27 0.00 3.86
358 359 0.183014 TCTCGGCCTAGGGTACTCTG 59.817 60.000 11.72 0.00 0.00 3.35
359 360 0.924823 TTCTCGGCCTAGGGTACTCT 59.075 55.000 11.72 0.00 0.00 3.24
360 361 1.031235 GTTCTCGGCCTAGGGTACTC 58.969 60.000 11.72 0.00 0.00 2.59
361 362 0.630134 AGTTCTCGGCCTAGGGTACT 59.370 55.000 11.72 3.47 0.00 2.73
362 363 1.952990 GTAGTTCTCGGCCTAGGGTAC 59.047 57.143 11.72 1.21 0.00 3.34
363 364 1.565759 TGTAGTTCTCGGCCTAGGGTA 59.434 52.381 11.72 0.00 0.00 3.69
364 365 0.333993 TGTAGTTCTCGGCCTAGGGT 59.666 55.000 11.72 0.00 0.00 4.34
365 366 0.745468 GTGTAGTTCTCGGCCTAGGG 59.255 60.000 11.72 0.00 0.00 3.53
366 367 1.677052 GAGTGTAGTTCTCGGCCTAGG 59.323 57.143 3.67 3.67 0.00 3.02
374 375 3.299340 TCTTTGCCGAGTGTAGTTCTC 57.701 47.619 0.00 0.00 0.00 2.87
375 376 3.746045 TTCTTTGCCGAGTGTAGTTCT 57.254 42.857 0.00 0.00 0.00 3.01
376 377 5.147162 CAAATTCTTTGCCGAGTGTAGTTC 58.853 41.667 0.00 0.00 33.36 3.01
377 378 5.108385 CAAATTCTTTGCCGAGTGTAGTT 57.892 39.130 0.00 0.00 33.36 2.24
378 379 4.749245 CAAATTCTTTGCCGAGTGTAGT 57.251 40.909 0.00 0.00 33.36 2.73
389 390 3.624326 TCACACTCGGCAAATTCTTTG 57.376 42.857 0.00 0.00 43.44 2.77
390 391 4.142271 TGTTTCACACTCGGCAAATTCTTT 60.142 37.500 0.00 0.00 0.00 2.52
391 392 3.380004 TGTTTCACACTCGGCAAATTCTT 59.620 39.130 0.00 0.00 0.00 2.52
392 393 2.948979 TGTTTCACACTCGGCAAATTCT 59.051 40.909 0.00 0.00 0.00 2.40
393 394 3.300009 CTGTTTCACACTCGGCAAATTC 58.700 45.455 0.00 0.00 0.00 2.17
394 395 2.543653 GCTGTTTCACACTCGGCAAATT 60.544 45.455 0.00 0.00 0.00 1.82
395 396 1.001378 GCTGTTTCACACTCGGCAAAT 60.001 47.619 0.00 0.00 0.00 2.32
396 397 0.380378 GCTGTTTCACACTCGGCAAA 59.620 50.000 0.00 0.00 0.00 3.68
397 398 0.463654 AGCTGTTTCACACTCGGCAA 60.464 50.000 0.00 0.00 0.00 4.52
398 399 0.463654 AAGCTGTTTCACACTCGGCA 60.464 50.000 0.00 0.00 0.00 5.69
399 400 0.663153 AAAGCTGTTTCACACTCGGC 59.337 50.000 0.00 0.00 0.00 5.54
400 401 1.070577 CGAAAGCTGTTTCACACTCGG 60.071 52.381 0.00 0.00 42.06 4.63
401 402 2.285319 CGAAAGCTGTTTCACACTCG 57.715 50.000 0.00 0.00 42.06 4.18
415 416 1.663161 GCCAGAAAAACTCGGCGAAAG 60.663 52.381 12.13 2.21 34.84 2.62
416 417 0.309612 GCCAGAAAAACTCGGCGAAA 59.690 50.000 12.13 0.00 34.84 3.46
417 418 0.816018 TGCCAGAAAAACTCGGCGAA 60.816 50.000 12.13 0.00 41.90 4.70
418 419 1.227704 TGCCAGAAAAACTCGGCGA 60.228 52.632 10.14 10.14 41.90 5.54
419 420 1.082104 GTGCCAGAAAAACTCGGCG 60.082 57.895 0.00 0.00 41.90 6.46
420 421 0.238553 GAGTGCCAGAAAAACTCGGC 59.761 55.000 0.00 0.00 40.55 5.54
421 422 1.532868 CTGAGTGCCAGAAAAACTCGG 59.467 52.381 0.00 0.00 45.78 4.63
422 423 1.532868 CCTGAGTGCCAGAAAAACTCG 59.467 52.381 0.00 0.00 45.78 4.18
423 424 2.851195 TCCTGAGTGCCAGAAAAACTC 58.149 47.619 0.00 0.00 45.78 3.01
424 425 3.297134 TTCCTGAGTGCCAGAAAAACT 57.703 42.857 0.00 0.00 45.78 2.66
425 426 3.381590 AGTTTCCTGAGTGCCAGAAAAAC 59.618 43.478 0.00 0.00 45.78 2.43
426 427 3.631250 AGTTTCCTGAGTGCCAGAAAAA 58.369 40.909 0.00 0.00 45.78 1.94
427 428 3.117888 AGAGTTTCCTGAGTGCCAGAAAA 60.118 43.478 0.00 0.00 45.78 2.29
428 429 2.439507 AGAGTTTCCTGAGTGCCAGAAA 59.560 45.455 0.00 0.00 45.78 2.52
429 430 2.050144 AGAGTTTCCTGAGTGCCAGAA 58.950 47.619 0.00 0.00 45.78 3.02
430 431 1.345741 CAGAGTTTCCTGAGTGCCAGA 59.654 52.381 0.00 0.00 45.78 3.86
431 432 1.345741 TCAGAGTTTCCTGAGTGCCAG 59.654 52.381 0.00 0.00 38.18 4.85
432 433 1.423584 TCAGAGTTTCCTGAGTGCCA 58.576 50.000 0.00 0.00 38.18 4.92
433 434 2.550830 TTCAGAGTTTCCTGAGTGCC 57.449 50.000 0.00 0.00 43.28 5.01
434 435 4.759183 AGAATTTCAGAGTTTCCTGAGTGC 59.241 41.667 0.00 0.00 43.28 4.40
435 436 7.158021 AGTAGAATTTCAGAGTTTCCTGAGTG 58.842 38.462 0.00 0.00 43.28 3.51
436 437 7.309770 AGTAGAATTTCAGAGTTTCCTGAGT 57.690 36.000 0.00 0.00 43.28 3.41
437 438 9.883142 ATTAGTAGAATTTCAGAGTTTCCTGAG 57.117 33.333 0.00 0.00 43.28 3.35
438 439 9.658799 CATTAGTAGAATTTCAGAGTTTCCTGA 57.341 33.333 0.00 0.00 41.06 3.86
439 440 9.658799 TCATTAGTAGAATTTCAGAGTTTCCTG 57.341 33.333 0.00 0.00 35.55 3.86
463 464 9.958180 TTTCCTTATGTTGAGAATGACTTATCA 57.042 29.630 0.00 0.00 39.83 2.15
465 466 9.965902 AGTTTCCTTATGTTGAGAATGACTTAT 57.034 29.630 0.00 0.00 0.00 1.73
466 467 9.793259 AAGTTTCCTTATGTTGAGAATGACTTA 57.207 29.630 0.00 0.00 0.00 2.24
467 468 8.697507 AAGTTTCCTTATGTTGAGAATGACTT 57.302 30.769 0.00 0.00 0.00 3.01
468 469 7.939039 TGAAGTTTCCTTATGTTGAGAATGACT 59.061 33.333 0.00 0.00 0.00 3.41
469 470 8.099364 TGAAGTTTCCTTATGTTGAGAATGAC 57.901 34.615 0.00 0.00 0.00 3.06
470 471 8.868522 ATGAAGTTTCCTTATGTTGAGAATGA 57.131 30.769 0.00 0.00 0.00 2.57
482 483 9.886132 GACTCCACTTATTATGAAGTTTCCTTA 57.114 33.333 0.00 0.00 37.57 2.69
483 484 8.383175 TGACTCCACTTATTATGAAGTTTCCTT 58.617 33.333 0.00 0.00 37.57 3.36
484 485 7.918076 TGACTCCACTTATTATGAAGTTTCCT 58.082 34.615 0.00 0.00 37.57 3.36
485 486 8.561738 TTGACTCCACTTATTATGAAGTTTCC 57.438 34.615 0.00 0.00 37.57 3.13
487 488 9.574516 ACTTTGACTCCACTTATTATGAAGTTT 57.425 29.630 0.00 0.00 37.57 2.66
488 489 9.574516 AACTTTGACTCCACTTATTATGAAGTT 57.425 29.630 0.00 0.00 37.57 2.66
489 490 9.574516 AAACTTTGACTCCACTTATTATGAAGT 57.425 29.630 0.00 0.00 40.35 3.01
491 492 9.793259 AGAAACTTTGACTCCACTTATTATGAA 57.207 29.630 0.00 0.00 0.00 2.57
492 493 9.219603 CAGAAACTTTGACTCCACTTATTATGA 57.780 33.333 0.00 0.00 0.00 2.15
493 494 8.454106 CCAGAAACTTTGACTCCACTTATTATG 58.546 37.037 0.00 0.00 0.00 1.90
494 495 8.164070 ACCAGAAACTTTGACTCCACTTATTAT 58.836 33.333 0.00 0.00 0.00 1.28
519 520 3.450578 CTTAACCAATGCATGCATGGAC 58.549 45.455 35.53 12.69 36.68 4.02
628 629 5.169295 AGTCTACTTCATGGCTTACGAAAC 58.831 41.667 0.00 0.00 0.00 2.78
629 630 5.401531 AGTCTACTTCATGGCTTACGAAA 57.598 39.130 0.00 0.00 0.00 3.46
659 660 5.595885 ACAGAATCAGTCAGGATATCGTTG 58.404 41.667 0.00 0.00 0.00 4.10
666 667 2.692557 CTCGGACAGAATCAGTCAGGAT 59.307 50.000 8.04 0.00 37.74 3.24
695 696 3.197116 TCGGAATTAAGAACCCTCACTCC 59.803 47.826 0.00 0.00 0.00 3.85
696 697 4.467198 TCGGAATTAAGAACCCTCACTC 57.533 45.455 0.00 0.00 0.00 3.51
725 726 3.379057 CCAATCACATCATTACAGCTGCA 59.621 43.478 15.27 0.00 0.00 4.41
749 750 5.471556 TCTGTTGCATTGAATGGTTGAAT 57.528 34.783 7.35 0.00 0.00 2.57
752 753 4.624015 ACTTCTGTTGCATTGAATGGTTG 58.376 39.130 7.35 0.00 0.00 3.77
753 754 4.942761 ACTTCTGTTGCATTGAATGGTT 57.057 36.364 7.35 0.00 0.00 3.67
784 785 3.626028 AACACGGTGAAGAATGAAAGC 57.374 42.857 16.29 0.00 0.00 3.51
789 790 1.608590 AGGCAAACACGGTGAAGAATG 59.391 47.619 16.29 7.01 0.00 2.67
830 831 3.600448 ATGTTATCTCCCCAACCCATG 57.400 47.619 0.00 0.00 0.00 3.66
831 832 3.531397 TCAATGTTATCTCCCCAACCCAT 59.469 43.478 0.00 0.00 0.00 4.00
834 835 3.947834 CAGTCAATGTTATCTCCCCAACC 59.052 47.826 0.00 0.00 0.00 3.77
836 837 3.010027 TGCAGTCAATGTTATCTCCCCAA 59.990 43.478 0.00 0.00 0.00 4.12
840 841 9.455847 GAAAATTATGCAGTCAATGTTATCTCC 57.544 33.333 0.00 0.00 0.00 3.71
861 862 9.778741 TCCTTAGTTGCAATCGATATAGAAAAT 57.221 29.630 0.59 0.00 0.00 1.82
870 871 3.452627 AGAGGTCCTTAGTTGCAATCGAT 59.547 43.478 0.59 0.00 0.00 3.59
888 889 3.307059 CGGGGCTGAATTTATAGGAGAGG 60.307 52.174 0.00 0.00 0.00 3.69
946 947 9.689501 AATGAAATGGGATTCAGCAAAAATTAT 57.310 25.926 0.00 0.00 42.21 1.28
957 958 6.237154 GTTTGGGAAAATGAAATGGGATTCA 58.763 36.000 0.00 0.00 43.03 2.57
973 974 4.561938 CGATGTACAGTAGTGGTTTGGGAA 60.562 45.833 0.33 0.00 0.00 3.97
1079 1092 1.832608 CCGATGACGATGGGGAGGA 60.833 63.158 0.00 0.00 42.66 3.71
1080 1093 2.134287 ACCGATGACGATGGGGAGG 61.134 63.158 0.00 0.00 42.66 4.30
1104 1117 6.127310 ACTGTAGTTAGCCCTGATAAGTTGAG 60.127 42.308 0.00 0.00 0.00 3.02
1214 1227 7.861372 GCATCATTCAGTGATAAGGAAATTCAG 59.139 37.037 0.00 0.00 45.76 3.02
1583 1629 4.338539 GTCCTGTCGTCGTGGCGT 62.339 66.667 0.00 0.00 0.00 5.68
1585 1631 3.628280 GAGGTCCTGTCGTCGTGGC 62.628 68.421 0.00 0.00 0.00 5.01
1706 1755 3.384789 GCTCCATGTACTCATACACCAGA 59.615 47.826 0.00 0.00 44.11 3.86
2024 2082 4.228567 TCGCACTTCACGGTGGCA 62.229 61.111 8.50 0.00 37.65 4.92
2202 2263 0.603975 GCCGTCTTCTTGTCCTGCTT 60.604 55.000 0.00 0.00 0.00 3.91
2288 2358 0.883833 CAAGCATCTTCACCACCACC 59.116 55.000 0.00 0.00 0.00 4.61
2306 2376 2.013563 GCAATGTCCATCTCGCCTTCA 61.014 52.381 0.00 0.00 0.00 3.02
2335 2405 0.036388 GAGATGCTGGAACGGGTTCA 60.036 55.000 13.08 0.00 41.20 3.18
2368 2438 1.112315 GGTCCACATGTTTGCCACCA 61.112 55.000 0.00 0.00 0.00 4.17
2527 2597 2.634940 CACCATACATGTAGAGGGGAGG 59.365 54.545 23.57 13.55 0.00 4.30
2528 2598 3.576118 CTCACCATACATGTAGAGGGGAG 59.424 52.174 30.06 30.06 37.93 4.30
2529 2599 3.576861 CTCACCATACATGTAGAGGGGA 58.423 50.000 23.42 23.42 0.00 4.81
2530 2600 2.037772 GCTCACCATACATGTAGAGGGG 59.962 54.545 23.57 21.30 31.48 4.79
2531 2601 2.700371 TGCTCACCATACATGTAGAGGG 59.300 50.000 23.57 19.74 31.48 4.30
2532 2602 3.132824 TGTGCTCACCATACATGTAGAGG 59.867 47.826 20.10 20.10 31.48 3.69
2562 2632 2.551097 TACGACGCACACATCGCCAT 62.551 55.000 0.00 0.00 42.12 4.40
2596 2666 3.461773 CCATCCCACGAGCGGACT 61.462 66.667 0.00 0.00 30.39 3.85
2648 2718 8.607441 AAACTTTCCCTTCTCATTTTTATTGC 57.393 30.769 0.00 0.00 0.00 3.56
2653 2723 7.778083 ACGTAAAACTTTCCCTTCTCATTTTT 58.222 30.769 0.00 0.00 0.00 1.94
2687 2757 5.147162 CAAACGCAAAGAGTAATGAGGAAC 58.853 41.667 0.00 0.00 0.00 3.62
2741 2811 4.216257 ACGGTGATGTTTCATTTTCCTCAG 59.784 41.667 0.00 0.00 33.56 3.35
2752 2822 2.858344 CCTCGATACACGGTGATGTTTC 59.142 50.000 16.29 3.27 42.82 2.78
2754 2824 1.822990 ACCTCGATACACGGTGATGTT 59.177 47.619 16.29 0.00 42.82 2.71
2757 2827 4.679662 CTTAAACCTCGATACACGGTGAT 58.320 43.478 16.29 3.99 42.82 3.06
2772 2842 7.097168 CGCGCTATTTAAAACTATGCTTAAACC 60.097 37.037 5.56 0.00 31.63 3.27
2773 2843 7.562766 GCGCGCTATTTAAAACTATGCTTAAAC 60.563 37.037 26.67 0.00 31.63 2.01
2774 2844 6.412653 GCGCGCTATTTAAAACTATGCTTAAA 59.587 34.615 26.67 0.00 32.96 1.52
2775 2845 5.905181 GCGCGCTATTTAAAACTATGCTTAA 59.095 36.000 26.67 0.00 0.00 1.85
2776 2846 5.235616 AGCGCGCTATTTAAAACTATGCTTA 59.764 36.000 35.79 0.00 0.00 3.09
2777 2847 4.035208 AGCGCGCTATTTAAAACTATGCTT 59.965 37.500 35.79 0.18 0.00 3.91
2778 2848 3.560068 AGCGCGCTATTTAAAACTATGCT 59.440 39.130 35.79 0.63 0.00 3.79
2779 2849 3.873529 AGCGCGCTATTTAAAACTATGC 58.126 40.909 35.79 0.00 0.00 3.14
2780 2850 9.250986 CTAATTAGCGCGCTATTTAAAACTATG 57.749 33.333 35.67 25.52 29.58 2.23
2781 2851 7.955864 GCTAATTAGCGCGCTATTTAAAACTAT 59.044 33.333 35.67 24.91 39.82 2.12
2782 2852 7.285788 GCTAATTAGCGCGCTATTTAAAACTA 58.714 34.615 35.67 24.05 39.82 2.24
2783 2853 6.134061 GCTAATTAGCGCGCTATTTAAAACT 58.866 36.000 35.67 21.70 39.82 2.66
2784 2854 6.345389 GCTAATTAGCGCGCTATTTAAAAC 57.655 37.500 35.67 28.20 39.82 2.43
2798 2868 3.067106 TGCCGCTAAGATGCTAATTAGC 58.933 45.455 27.23 27.23 46.70 3.09
2799 2869 4.387256 GTCTGCCGCTAAGATGCTAATTAG 59.613 45.833 8.20 8.20 33.10 1.73
2800 2870 4.307432 GTCTGCCGCTAAGATGCTAATTA 58.693 43.478 0.00 0.00 0.00 1.40
2801 2871 3.134458 GTCTGCCGCTAAGATGCTAATT 58.866 45.455 0.00 0.00 0.00 1.40
2802 2872 2.548920 GGTCTGCCGCTAAGATGCTAAT 60.549 50.000 0.00 0.00 0.00 1.73
2803 2873 1.202533 GGTCTGCCGCTAAGATGCTAA 60.203 52.381 0.00 0.00 0.00 3.09
2804 2874 0.389391 GGTCTGCCGCTAAGATGCTA 59.611 55.000 0.00 0.00 0.00 3.49
2805 2875 1.144936 GGTCTGCCGCTAAGATGCT 59.855 57.895 0.00 0.00 0.00 3.79
2806 2876 0.878086 GAGGTCTGCCGCTAAGATGC 60.878 60.000 0.00 0.00 40.50 3.91
2807 2877 0.749649 AGAGGTCTGCCGCTAAGATG 59.250 55.000 0.00 0.00 43.27 2.90
2808 2878 1.410882 GAAGAGGTCTGCCGCTAAGAT 59.589 52.381 0.00 0.00 44.34 2.40
2809 2879 0.818296 GAAGAGGTCTGCCGCTAAGA 59.182 55.000 0.00 0.00 44.34 2.10
2810 2880 0.179097 GGAAGAGGTCTGCCGCTAAG 60.179 60.000 0.00 0.00 44.34 2.18
2811 2881 0.902984 TGGAAGAGGTCTGCCGCTAA 60.903 55.000 0.00 0.00 45.19 3.09
2812 2882 0.902984 TTGGAAGAGGTCTGCCGCTA 60.903 55.000 0.00 0.00 45.19 4.26
2813 2883 1.768684 TTTGGAAGAGGTCTGCCGCT 61.769 55.000 0.00 0.00 45.19 5.52
2814 2884 0.678048 ATTTGGAAGAGGTCTGCCGC 60.678 55.000 0.00 0.00 45.19 6.53
2815 2885 2.093447 AGTATTTGGAAGAGGTCTGCCG 60.093 50.000 0.00 0.00 45.19 5.69
2816 2886 3.636153 AGTATTTGGAAGAGGTCTGCC 57.364 47.619 0.00 0.00 42.39 4.85
2817 2887 5.929415 GCTATAGTATTTGGAAGAGGTCTGC 59.071 44.000 0.84 0.00 0.00 4.26
2818 2888 6.153067 CGCTATAGTATTTGGAAGAGGTCTG 58.847 44.000 0.84 0.00 0.00 3.51
2819 2889 5.834204 ACGCTATAGTATTTGGAAGAGGTCT 59.166 40.000 0.84 0.00 0.00 3.85
2820 2890 5.921408 CACGCTATAGTATTTGGAAGAGGTC 59.079 44.000 0.84 0.00 0.00 3.85
2821 2891 5.739358 GCACGCTATAGTATTTGGAAGAGGT 60.739 44.000 0.84 0.00 0.00 3.85
2822 2892 4.686554 GCACGCTATAGTATTTGGAAGAGG 59.313 45.833 0.84 0.00 0.00 3.69
2823 2893 5.533482 AGCACGCTATAGTATTTGGAAGAG 58.467 41.667 0.84 0.00 0.00 2.85
2824 2894 5.531122 AGCACGCTATAGTATTTGGAAGA 57.469 39.130 0.84 0.00 0.00 2.87
2825 2895 8.621921 CTATAGCACGCTATAGTATTTGGAAG 57.378 38.462 27.20 9.68 46.57 3.46
2836 2906 8.523523 TTTTAAATTCGCTATAGCACGCTATA 57.476 30.769 23.99 15.99 42.21 1.31
2837 2907 7.416154 TTTTAAATTCGCTATAGCACGCTAT 57.584 32.000 23.99 15.45 42.21 2.97
2838 2908 6.831727 TTTTAAATTCGCTATAGCACGCTA 57.168 33.333 23.99 0.39 42.21 4.26
2839 2909 5.728351 TTTTAAATTCGCTATAGCACGCT 57.272 34.783 23.99 7.00 42.21 5.07
2840 2910 5.907391 ACATTTTAAATTCGCTATAGCACGC 59.093 36.000 23.99 0.00 42.21 5.34
2841 2911 7.892445 AACATTTTAAATTCGCTATAGCACG 57.108 32.000 23.99 9.26 42.21 5.34
2842 2912 9.072294 ACAAACATTTTAAATTCGCTATAGCAC 57.928 29.630 23.99 0.00 42.21 4.40
2843 2913 9.632807 AACAAACATTTTAAATTCGCTATAGCA 57.367 25.926 23.99 6.37 42.21 3.49
2849 2919 9.649024 CAAATGAACAAACATTTTAAATTCGCT 57.351 25.926 0.00 0.00 44.63 4.93
2850 2920 9.432077 ACAAATGAACAAACATTTTAAATTCGC 57.568 25.926 0.00 0.00 44.63 4.70
2858 2928 9.442047 TGGTCTAAACAAATGAACAAACATTTT 57.558 25.926 0.00 0.00 44.63 1.82
2859 2929 9.442047 TTGGTCTAAACAAATGAACAAACATTT 57.558 25.926 0.00 0.00 46.85 2.32
2860 2930 9.442047 TTTGGTCTAAACAAATGAACAAACATT 57.558 25.926 0.00 0.00 40.89 2.71
2861 2931 9.097257 CTTTGGTCTAAACAAATGAACAAACAT 57.903 29.630 0.00 0.00 40.89 2.71
2862 2932 8.091449 ACTTTGGTCTAAACAAATGAACAAACA 58.909 29.630 0.00 0.00 40.89 2.83
2863 2933 8.474006 ACTTTGGTCTAAACAAATGAACAAAC 57.526 30.769 0.00 0.00 40.89 2.93
2864 2934 8.696410 GACTTTGGTCTAAACAAATGAACAAA 57.304 30.769 0.00 0.00 42.70 2.83
2880 2950 5.813157 GGTCTTATGCTAAGAGACTTTGGTC 59.187 44.000 6.04 0.00 39.70 4.02
2881 2951 5.485708 AGGTCTTATGCTAAGAGACTTTGGT 59.514 40.000 6.04 0.00 39.70 3.67
2882 2952 5.983540 AGGTCTTATGCTAAGAGACTTTGG 58.016 41.667 6.04 0.00 39.70 3.28
2883 2953 7.913674 AAAGGTCTTATGCTAAGAGACTTTG 57.086 36.000 20.06 0.00 38.97 2.77
2884 2954 7.939588 ACAAAAGGTCTTATGCTAAGAGACTTT 59.060 33.333 17.82 17.82 40.17 2.66
2885 2955 7.454225 ACAAAAGGTCTTATGCTAAGAGACTT 58.546 34.615 6.04 9.66 39.70 3.01
2886 2956 7.010339 ACAAAAGGTCTTATGCTAAGAGACT 57.990 36.000 6.04 5.57 39.70 3.24
2887 2957 8.773404 TTACAAAAGGTCTTATGCTAAGAGAC 57.227 34.615 6.04 4.39 39.19 3.36
2888 2958 9.216117 GTTTACAAAAGGTCTTATGCTAAGAGA 57.784 33.333 6.04 0.00 0.00 3.10
2889 2959 8.169268 CGTTTACAAAAGGTCTTATGCTAAGAG 58.831 37.037 6.04 0.00 0.00 2.85
2890 2960 7.360607 GCGTTTACAAAAGGTCTTATGCTAAGA 60.361 37.037 2.63 2.63 0.00 2.10
2891 2961 6.741358 GCGTTTACAAAAGGTCTTATGCTAAG 59.259 38.462 0.00 0.00 0.00 2.18
2892 2962 6.428771 AGCGTTTACAAAAGGTCTTATGCTAA 59.571 34.615 0.00 0.00 29.85 3.09
2893 2963 5.935789 AGCGTTTACAAAAGGTCTTATGCTA 59.064 36.000 0.00 0.00 29.85 3.49
2894 2964 4.760204 AGCGTTTACAAAAGGTCTTATGCT 59.240 37.500 0.00 0.00 0.00 3.79
2895 2965 5.043189 AGCGTTTACAAAAGGTCTTATGC 57.957 39.130 0.00 0.00 0.00 3.14
2896 2966 8.062448 GCTATAGCGTTTACAAAAGGTCTTATG 58.938 37.037 9.40 0.00 31.10 1.90
2897 2967 8.139521 GCTATAGCGTTTACAAAAGGTCTTAT 57.860 34.615 9.40 0.00 31.10 1.73
2898 2968 7.529880 GCTATAGCGTTTACAAAAGGTCTTA 57.470 36.000 9.40 0.00 31.10 2.10
2899 2969 6.418585 GCTATAGCGTTTACAAAAGGTCTT 57.581 37.500 9.40 0.00 31.10 3.01
2917 2987 3.687125 AGCTCCACTATAGCACGCTATA 58.313 45.455 15.99 15.99 42.62 1.31
2918 2988 2.520069 AGCTCCACTATAGCACGCTAT 58.480 47.619 15.45 15.45 42.62 2.97
2919 2989 1.982660 AGCTCCACTATAGCACGCTA 58.017 50.000 0.39 0.39 42.62 4.26
2920 2990 1.982660 TAGCTCCACTATAGCACGCT 58.017 50.000 0.00 5.75 42.62 5.07
2927 2997 2.025226 AGCCCGCTATAGCTCCACTATA 60.025 50.000 21.98 0.00 41.91 1.31
2928 2998 1.187087 GCCCGCTATAGCTCCACTAT 58.813 55.000 21.98 0.00 44.12 2.12
2929 2999 0.112606 AGCCCGCTATAGCTCCACTA 59.887 55.000 21.98 0.00 39.32 2.74
2930 3000 0.112606 TAGCCCGCTATAGCTCCACT 59.887 55.000 21.98 15.22 40.56 4.00
2931 3001 1.187087 ATAGCCCGCTATAGCTCCAC 58.813 55.000 21.98 9.11 40.56 4.02
2932 3002 1.938585 AATAGCCCGCTATAGCTCCA 58.061 50.000 21.98 3.81 40.56 3.86
2933 3003 4.467198 TTAAATAGCCCGCTATAGCTCC 57.533 45.455 21.98 10.06 40.56 4.70
2934 3004 5.699458 TGTTTTAAATAGCCCGCTATAGCTC 59.301 40.000 21.98 11.04 40.56 4.09
2935 3005 5.617252 TGTTTTAAATAGCCCGCTATAGCT 58.383 37.500 21.98 6.31 43.20 3.32
2936 3006 5.469084 ACTGTTTTAAATAGCCCGCTATAGC 59.531 40.000 15.09 15.09 38.20 2.97
2937 3007 6.565999 GCACTGTTTTAAATAGCCCGCTATAG 60.566 42.308 9.56 4.62 38.20 1.31
2938 3008 5.237779 GCACTGTTTTAAATAGCCCGCTATA 59.762 40.000 9.56 0.00 38.20 1.31
2939 3009 4.036380 GCACTGTTTTAAATAGCCCGCTAT 59.964 41.667 3.31 3.31 40.63 2.97
2940 3010 3.375922 GCACTGTTTTAAATAGCCCGCTA 59.624 43.478 0.00 0.00 0.00 4.26
2941 3011 2.163613 GCACTGTTTTAAATAGCCCGCT 59.836 45.455 1.36 0.00 0.00 5.52
2942 3012 2.526077 GCACTGTTTTAAATAGCCCGC 58.474 47.619 1.36 0.00 0.00 6.13
2943 3013 2.160813 ACGCACTGTTTTAAATAGCCCG 59.839 45.455 10.76 10.76 0.00 6.13
2944 3014 3.842732 ACGCACTGTTTTAAATAGCCC 57.157 42.857 1.36 0.00 0.00 5.19
2955 3025 0.865769 CTCGGCTTAAACGCACTGTT 59.134 50.000 0.00 0.00 44.59 3.16
2956 3026 0.249741 ACTCGGCTTAAACGCACTGT 60.250 50.000 0.00 0.00 0.00 3.55
2957 3027 0.163788 CACTCGGCTTAAACGCACTG 59.836 55.000 0.00 0.00 0.00 3.66
2958 3028 0.032952 TCACTCGGCTTAAACGCACT 59.967 50.000 0.00 0.00 0.00 4.40
2959 3029 0.163146 GTCACTCGGCTTAAACGCAC 59.837 55.000 0.00 0.00 0.00 5.34
2960 3030 0.249531 TGTCACTCGGCTTAAACGCA 60.250 50.000 0.00 0.00 0.00 5.24
2961 3031 0.863144 TTGTCACTCGGCTTAAACGC 59.137 50.000 0.00 0.00 0.00 4.84
2979 3049 6.714810 TCATGTAAGTTGAGTAGCCATGTTTT 59.285 34.615 0.00 0.00 32.24 2.43
2994 3064 9.383519 CTTATGTGGATGTAACTCATGTAAGTT 57.616 33.333 5.26 5.26 42.10 2.66
3023 3093 1.133915 TGAGTTTTCCGTTCCTGGCTT 60.134 47.619 0.00 0.00 0.00 4.35
3027 3097 0.865769 CCGTGAGTTTTCCGTTCCTG 59.134 55.000 0.00 0.00 0.00 3.86
3033 3103 0.305313 TTTTCGCCGTGAGTTTTCCG 59.695 50.000 0.00 0.00 0.00 4.30
3060 3130 3.245519 GGCTCATTCGGATTTAAGTCGTC 59.754 47.826 0.00 0.00 0.00 4.20
3123 3193 4.762289 ACAGAAATCTTTATCGAGCCCT 57.238 40.909 0.00 0.00 0.00 5.19
3124 3194 5.844004 TCTACAGAAATCTTTATCGAGCCC 58.156 41.667 0.00 0.00 0.00 5.19
3233 3303 0.740737 GCGGCCATGCAATTCTAACT 59.259 50.000 2.24 0.00 34.15 2.24
3234 3304 0.455410 TGCGGCCATGCAATTCTAAC 59.545 50.000 2.24 0.00 43.02 2.34
3338 3409 2.943653 GTCGCCGGTGAGGTTTTG 59.056 61.111 20.25 0.00 43.70 2.44
3375 3446 1.155424 TGAACGGCACCGACAAAGTC 61.155 55.000 17.40 3.80 42.83 3.01
3420 3491 0.179000 AGGCTCCAGATGCGTTAAGG 59.821 55.000 0.00 0.00 0.00 2.69
3422 3493 0.178068 GGAGGCTCCAGATGCGTTAA 59.822 55.000 28.55 0.00 36.28 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.